BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016725
         (384 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/347 (89%), Positives = 335/347 (96%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL+GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT+PQLVES
Sbjct: 188 PRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES 247

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLLG LENIPVV
Sbjct: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVV 307

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQF++LNLQP+VVA
Sbjct: 308 QIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVA 367

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HVATGDYTTFV
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 427

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L+P+LVTSLKQ+ ER+VQISLTNSIY
Sbjct: 428 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 487

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTERGNPERVDIDLS
Sbjct: 488 WNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNPERVDIDLS 534



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 29/293 (9%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F   +  +  +  +   L  
Sbjct: 235 GTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEP 294

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L+NI VVQ A G  +   L+ +     VY+   G   +LGH T  +  E HP 
Sbjct: 295 HP-LLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTD--EKHPR 351

Query: 148 L---GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           L     + N+  + +AAG  +   +        V + G G  G LGHG+   E  P+++E
Sbjct: 352 LIEQFRILNLQPMVVAAGAWHAAVVG---RDGRVCTWGWGRYGCLGHGNEECESVPKVVE 408

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKV 256
              L+N++ V VA G +   VV  DG V ++G G    LGH       GN     + P++
Sbjct: 409 --ALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPEL 466

Query: 257 VQALNDVKAIHVATG-------DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           V +L  +K   V          +  TF ++E G +Y+FG G+   LG   +A+
Sbjct: 467 VTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVAN 519



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 19/191 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVYS G    G+LGHG+  +E  PR I   + + +  +  AAGA    ++   G+V  +G
Sbjct: 165 AVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRI--IQAAAGAGRTMLISDAGQVYAFG 222

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G +  + V  P++V++L ++  +  A G++ T V+S +G VY+F  G  A 
Sbjct: 223 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 282

Query: 295 LGHNAIADGQGNRHANVLTPQ-LVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLY 352
           LGH           AN L P  L+ +L+ +   VVQI+   + Y      A   +G  +Y
Sbjct: 283 LGHQT--------EANDLEPHPLLGALENIP--VVQIA---AGYCYLLALACQPNGMSVY 329

Query: 353 AFGAGDKGQLG 363
           + G G  G+LG
Sbjct: 330 SVGCGLGGKLG 340



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V ++G    G LGHG  + E  P+ +++L  ++ I  A G   T +
Sbjct: 152 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 211

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+ G VY+FG     S G  A    QG +   V TPQLV SLK  N  VVQ ++ N   
Sbjct: 212 ISDAGQVYAFG---KDSFG-EAEYGVQGTKL--VTTPQLVESLK--NIFVVQAAIGNFF- 262

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G++Y F  G+  +LG +   N  E
Sbjct: 263 ----TAVLSREGRVYTFSWGNDAKLGHQTEANDLE 293


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/347 (89%), Positives = 335/347 (96%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL+GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT+PQLVES
Sbjct: 180 PRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES 239

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLLG LENIPVV
Sbjct: 240 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVV 299

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQF++LNLQP+VVA
Sbjct: 300 QIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVA 359

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HVATGDYTTFV
Sbjct: 360 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 419

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L+P+LVTSLKQ+ ER+VQISLTNSIY
Sbjct: 420 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 479

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTERGNPERVDIDLS
Sbjct: 480 WNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNPERVDIDLS 526



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 29/293 (9%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F   +  +  +  +   L  
Sbjct: 227 GTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEP 286

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L+NI VVQ A G  +   L+ +     VY+   G   +LGH T  +  E HP 
Sbjct: 287 HP-LLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTD--EKHPR 343

Query: 148 L---GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           L     + N+  + +AAG  +   +        V + G G  G LGHG+   E  P+++E
Sbjct: 344 LIEQFRILNLQPMVVAAGAWHAAVVG---RDGRVCTWGWGRYGCLGHGNEECESVPKVVE 400

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKV 256
              L+N++ V VA G +   VV  DG V ++G G    LGH       GN     + P++
Sbjct: 401 --ALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPEL 458

Query: 257 VQALNDVKAIHVATG-------DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           V +L  +K   V          +  TF ++E G +Y+FG G+   LG   +A+
Sbjct: 459 VTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVAN 511



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 19/191 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVYS G    G+LGHG+  +E  PR I   + + +  +  AAGA    ++   G+V  +G
Sbjct: 157 AVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRI--IQAAAGAGRTMLISDAGQVYAFG 214

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G +  + V  P++V++L ++  +  A G++ T V+S +G VY+F  G  A 
Sbjct: 215 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 274

Query: 295 LGHNAIADGQGNRHANVLTPQ-LVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLY 352
           LGH           AN L P  L+ +L+ +   VVQI+   + Y      A   +G  +Y
Sbjct: 275 LGHQT--------EANDLEPHPLLGALENIP--VVQIA---AGYCYLLALACQPNGMSVY 321

Query: 353 AFGAGDKGQLG 363
           + G G  G+LG
Sbjct: 322 SVGCGLGGKLG 332



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V ++G    G LGHG  + E  P+ +++L  ++ I  A G   T +
Sbjct: 144 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 203

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+ G VY+FG     S G  A    QG +   V TPQLV SLK +   VVQ ++ N   
Sbjct: 204 ISDAGQVYAFG---KDSFG-EAEYGVQGTKL--VTTPQLVESLKNI--FVVQAAIGNFF- 254

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G++Y F  G+  +LG +   N  E
Sbjct: 255 ----TAVLSREGRVYTFSWGNDAKLGHQTEANDLE 285


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/346 (90%), Positives = 330/346 (95%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAG GRTMLISDAG+VYAFGKDSFGEAEYGVQGTK VT+PQLVES
Sbjct: 192 PRQIRSLQGIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVES 251

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND +LGH TEPNDV PHPLLG LENIPVV
Sbjct: 252 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVV 311

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQLLNLQP+VVA
Sbjct: 312 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVA 371

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV AL+ VKA+HVATGDYTTFV
Sbjct: 372 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFV 431

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+DGDVYSFGCGESASLGHN   DGQGNRH NVL+P+LVTSLK+V ERVVQISLTNS+Y
Sbjct: 432 VSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVY 491

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           WNAHTFALTESGKL+AFGAGDKGQLG+ELVNNQTERGNPE+VD+DL
Sbjct: 492 WNAHTFALTESGKLFAFGAGDKGQLGMELVNNQTERGNPEQVDVDL 537


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/351 (90%), Positives = 334/351 (95%), Gaps = 5/351 (1%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAG GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT+PQLVES
Sbjct: 188 PRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES 247

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGH TEP DVEPHPLLG LENIPVV
Sbjct: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENIPVV 307

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQLLNLQP+VVA
Sbjct: 308 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVA 367

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV AL+++KA+HVATGDYTTFV
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDYTTFV 427

Query: 278 VSEDGDVYSFGCGESASLGH----NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
           VSE+GDVYSFGCGESASLGH     A ADGQG RHANVL+P+LVTSLK+VNERVVQISLT
Sbjct: 428 VSEEGDVYSFGCGESASLGHNAAAAANADGQG-RHANVLSPELVTSLKEVNERVVQISLT 486

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           NSIYWNAHTFALT+SGKLYAFGAGDKGQLG ELVNNQTERGNPERVDIDLS
Sbjct: 487 NSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVNNQTERGNPERVDIDLS 537


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/341 (90%), Positives = 329/341 (96%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL+GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT+PQLVES
Sbjct: 190 PRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVES 249

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA+LGH TE ND+EPHPLLG LENIPVV
Sbjct: 250 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVV 309

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQP+GM+VYSVGCGLGGKLGHG+RTDEKHPRLIEQFQ+LNLQP+VVA
Sbjct: 310 QIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVA 369

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL +VKA+HVATGDYTTFV
Sbjct: 370 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFV 429

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+DGDVYSFGCGES+SLGHN   DGQGNRHAN+L+P+LVTSLKQ+ ER+VQISLTNSIY
Sbjct: 430 VSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIY 489

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
           WNAHTFALTE+GKLYAFGAGDKGQLG+ELV NQTERGNPER
Sbjct: 490 WNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTERGNPER 530



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 29/287 (10%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F   +  +  +  +   L  
Sbjct: 237 GTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEP 296

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L+NI VVQ A G  +   L+ +     VY+   G   +LGH T  +  E HP 
Sbjct: 297 HP-LLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTD--EKHPR 353

Query: 148 L---GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           L     + N+  + +AAG  +   +        V + G G  G LGHG+   E  P+++E
Sbjct: 354 LIEQFQILNLQPMVVAAGAWHAAVVG---RDGRVCTWGWGRYGCLGHGNEECESVPKVVE 410

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKV 256
              L+N++ V VA G +   VV  DG V ++G G    LGH       GN     + P++
Sbjct: 411 --ALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPEL 468

Query: 257 VQALNDVKAIHVATG-------DYTTFVVSEDGDVYSFGCGESASLG 296
           V +L  +K   V          +  TF ++E G +Y+FG G+   LG
Sbjct: 469 VTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 515



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 19/191 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVYS G    G+LGHG+  +E  PR I   + + +  +  AAGA    ++   G+V  +G
Sbjct: 167 AVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRI--IQAAAGAGRTMLISDAGQVYAFG 224

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G +  + V  P++V++L ++  +  A G++ T V+S +G VY+F  G  A 
Sbjct: 225 KDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAK 284

Query: 295 LGHNAIADGQGNRHANVLTPQ-LVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLY 352
           LGH           AN L P  L+ +L+ +   VVQI+   + Y      A   +G  +Y
Sbjct: 285 LGHQT--------EANDLEPHPLLGALENIP--VVQIA---AGYCYLLALACQPNGMSVY 331

Query: 353 AFGAGDKGQLG 363
           + G G  G+LG
Sbjct: 332 SVGCGLGGKLG 342



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V ++G    G LGHG  + E  P+ +++L  ++ I  A G   T +
Sbjct: 154 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 213

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+ G VY+FG     S G  A    QG +   V TPQLV SLK  N  VVQ ++ N   
Sbjct: 214 ISDAGQVYAFG---KDSFG-EAEYGVQGTKL--VTTPQLVESLK--NIFVVQAAIGNFF- 264

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G++Y F  G+  +LG +   N  E
Sbjct: 265 ----TAVLSREGRVYTFSWGNDAKLGHQTEANDLE 295


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/347 (89%), Positives = 332/347 (95%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+LQGIRIIQAAAGAGRTML+SD+GQVYAFGKDSFGEAEYGVQG+K V +PQ+VES
Sbjct: 188 PRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVES 247

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ +DVEPHPLLG LENIPVV
Sbjct: 248 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVV 307

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQF LLNLQP+VVA
Sbjct: 308 QIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVA 367

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL++VKA+HVATGDYTTFV
Sbjct: 368 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFV 427

Query: 278 VSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           VS+DGDVYSFGCGESASLGHNA   D QGNRHANVL+P+LVTSLKQ+NERVVQISLTNSI
Sbjct: 428 VSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSI 487

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTERGNPERV+IDL
Sbjct: 488 YWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDL 534



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 28/293 (9%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G +    P    SL+ I ++QAA G   T ++S  G+VY F   S G+  +    + +  
Sbjct: 235 GSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEP 294

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L+NI VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P  +
Sbjct: 295 HP-LLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLI 353

Query: 148 --LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
              G L   P+V +AAG  +   +        V + G G  G LGHG+   E  P+++E 
Sbjct: 354 EQFGLLNLQPMV-VAAGAWHAAVVG---RDGRVCTWGWGRYGCLGHGNEECESVPKVVE- 408

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH---GNEECES------VPKV 256
             L N++ V VA G +   VV  DG V ++G G    LGH   GN+E  +       P++
Sbjct: 409 -ALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPEL 467

Query: 257 VQALNDV--KAIHVATGDYT-----TFVVSEDGDVYSFGCGESASLGHNAIAD 302
           V +L  +  + + ++  +       TF ++E G +Y+FG G+   LG   +A+
Sbjct: 468 VTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVAN 520



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 17/189 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VYS G    G+LGHG+  +E  PR I   Q + +  +  AAGA    +V   G+V  +G 
Sbjct: 166 VYSFGSNSSGQLGHGTTDEEWRPRPIRTLQGIRI--IQAAAGAGRTMLVSDSGQVYAFGK 223

Query: 238 GRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
             +G   +G +  ++V  P++V++L ++  +  A G++ T V+S +G VY+F  G    L
Sbjct: 224 DSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKL 283

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAF 354
           GH+          ++V    L+ +L+ +   VVQI+   + Y      A   SG  +Y+ 
Sbjct: 284 GHH-------TDQSDVEPHPLLGALENIP--VVQIA---AGYCYLLCLACQPSGMSVYSV 331

Query: 355 GAGDKGQLG 363
           G G  G+LG
Sbjct: 332 GCGLGGKLG 340



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 13/146 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V ++G    G LGHG  + E  P+ ++ L  ++ I  A G   T +
Sbjct: 152 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQGIRIIQAAAGAGRTML 211

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG     S G  A    QG++   V  PQ+V SLK  N  VVQ ++ N   
Sbjct: 212 VSDSGQVYAFG---KDSFGE-AEYGVQGSK--TVAAPQIVESLK--NIFVVQAAIGNFF- 262

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
               T  L+  G++Y F  G  G+LG
Sbjct: 263 ----TAVLSREGRVYTFSWGSDGKLG 284



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 17/136 (12%)

Query: 25  GKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGE 78
           G+   LG    E    P    +L  ++ +  A G   T ++SD G VY+FG     S G 
Sbjct: 388 GRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGH 447

Query: 79  AEYG--VQGTKL--VTSPQLVESLKNI--FVVQAAIGNFF-----TAVLSREGRVYTFSW 127
              G   QG +   V SP+LV SLK I   VVQ ++ N       T  L+  G++Y F  
Sbjct: 448 NAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGA 507

Query: 128 GNDARLGHHTEPNDVE 143
           G+  +LG     N  E
Sbjct: 508 GDKGQLGIELVANQTE 523


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/346 (86%), Positives = 326/346 (94%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+LQGIRIIQAAAGAGRTMLI+D+GQVYAFGKDSFGEAEYG QG+K V +P+LVES
Sbjct: 189 PKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVES 248

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ ND+EPHPLLG LE+IPVV
Sbjct: 249 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVV 308

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ LNLQP+V++
Sbjct: 309 QIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVIS 368

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+ PKVV AL +VKA+HVATGDYTTFV
Sbjct: 369 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFV 428

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           V+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL P+LVTSLKQ+NERVVQISLTNSIY
Sbjct: 429 VAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIY 488

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           WNAHTFALTESGKLYAFGAGDKGQLGIELV NQTER NPE+VDIDL
Sbjct: 489 WNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDIDL 534


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 300/346 (86%), Positives = 326/346 (94%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+LQGIRIIQAAAGAGRTMLI+D+GQVYAFGKDSFGEAEYG QG+K V +P+LVES
Sbjct: 86  PKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVES 145

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ ND+EPHPLLG LE+IPVV
Sbjct: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVV 205

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ LNLQP+V++
Sbjct: 206 QIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVIS 265

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+ PKVV AL +VKA+HVATGDYTTFV
Sbjct: 266 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFV 325

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           V+EDGDVYSFGCGESASLGHNA+ D +GNRHANVL P+LVTSLKQ+NERVVQISLTNSIY
Sbjct: 326 VAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIY 385

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           WNAHTFALTESGKLYAFGAGDKGQLGIELV NQTER NPE+VDIDL
Sbjct: 386 WNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDIDL 431


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 300/353 (84%), Positives = 323/353 (91%), Gaps = 2/353 (0%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E    P   RSLQGIRIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG QG ++VT+P
Sbjct: 183 EEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVVTTP 242

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +LVESLK+IFVVQAAIGNFFTAVLSREG VYTFSWG D+RLGHHTEPND+EP PL G LE
Sbjct: 243 KLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLEPRPLKGALE 302

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           NIPVVQIAAGYCYLLALAC PSGM+VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ
Sbjct: 303 NIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 362

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           PVVVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNE+CES PKVV+AL +VKA+HVATGD
Sbjct: 363 PVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESSPKVVEALINVKAVHVATGD 422

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           YTTFVVS+DGDVYSFGCGESASLGHN +  + +GNR  +VL P+LV SLKQ++ERVVQIS
Sbjct: 423 YTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPELVRSLKQISERVVQIS 482

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL  NQTERGNPE VDIDL+
Sbjct: 483 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELA-NQTERGNPELVDIDLN 534



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 30/288 (10%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G +V  TP    SL+ I ++QAA G   T ++S  G VY F   +     +  +   L  
Sbjct: 235 GAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLEP 294

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L  +L+NI VVQ A G  +   L+       VY+   G   +LGH +  +  E HP 
Sbjct: 295 RP-LKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTD--EKHPR 351

Query: 148 L---GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           L     L N+  V +AAG  +   +        V + G G  G LGHG+   E  P+++E
Sbjct: 352 LIEQFQLLNLQPVVVAAGAWHAAVVG---RDGRVCTWGWGRYGCLGHGNEDCESSPKVVE 408

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--------GNEECESV-PK 255
              L+N++ V VA G +   VV  DG V ++G G    LGH        GN +   + P+
Sbjct: 409 --ALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPE 466

Query: 256 VVQALNDV--KAIHVATGDYT-----TFVVSEDGDVYSFGCGESASLG 296
           +V++L  +  + + ++  +       TF ++E G +Y+FG G+   LG
Sbjct: 467 LVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 20/207 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVYS G    G+LGHG+  ++  PRLI   Q + +  +  AAG     ++   G V  +G
Sbjct: 165 AVYSFGSNSSGQLGHGTTEEQSPPRLIRSLQGIRI--IQAAAGGGRTMLISDAGHVYAFG 222

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G +  + V  PK+V++L D+  +  A G++ T V+S +G VY+F  G  + 
Sbjct: 223 KDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSR 282

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYA 353
           LGH+           N L P+ +    + N  VVQI+   + Y      A   SG  +Y+
Sbjct: 283 LGHHT--------EPNDLEPRPLKGALE-NIPVVQIA---AGYCYLLALACHPSGMSVYS 330

Query: 354 FGAGDKGQLGIELVNNQTERGNPERVD 380
            G G  G+LG     ++T+  +P  ++
Sbjct: 331 VGCGLGGKLGH---GSRTDEKHPRLIE 354


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 296/354 (83%), Positives = 324/354 (91%), Gaps = 1/354 (0%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G E    P   RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EYGVQG+++VT
Sbjct: 182 GLEEEWRPRPIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYGVQGSRVVT 241

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +PQ+VESLK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +LGH TEPNDV+PH L G 
Sbjct: 242 TPQMVESLKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGP 301

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           LENIPVVQIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN
Sbjct: 302 LENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQTLN 361

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +QPVVVAAGAWHAAVV +DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL  VKA+HVAT
Sbjct: 362 IQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALGSVKAVHVAT 421

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           GDYTTFVVS+ GDVYSFGCGES+SLGHN I +G  NRH+NVL+P+LVTSLK+ NERVVQ+
Sbjct: 422 GDYTTFVVSDKGDVYSFGCGESSSLGHNTIIEGN-NRHSNVLSPELVTSLKRTNERVVQV 480

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG ELV  Q ERG PERV+IDLS
Sbjct: 481 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGTELVAQQNERGAPERVEIDLS 534



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G    G LGH   E E  P+ +++L  ++ I  A G   T +
Sbjct: 153 AGPGHSIAVTTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRIIQAAAGAGRTML 212

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG      + +      QG+R   V TPQ+V SLK +   +VQ ++ N   
Sbjct: 213 VSDAGRVYAFGKDSFGEVEYGV----QGSR--VVTTPQMVESLKDI--YIVQAAIGNFF- 263

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G +Y F  G   +LG +   N  +
Sbjct: 264 ----TAVLSREGCVYTFSWGSDMKLGHQTEPNDVQ 294


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 293/347 (84%), Positives = 321/347 (92%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EY  QG+++VT+PQLVES
Sbjct: 189 PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVES 248

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+I++VQAAIGNFFTAVLSREG VYTFSWGND +LGH TEPNDV+PH L G LENIPVV
Sbjct: 249 LKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVV 308

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVA
Sbjct: 309 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVA 368

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV++L +V+AIHVATGDYTTFV
Sbjct: 369 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAIHVATGDYTTFV 428

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ GDVYSFGCGES+SLGHN I +G  NRH NVL+P+LVTSLK+ NERV QISLTNSIY
Sbjct: 429 VSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVLSPELVTSLKRTNERVAQISLTNSIY 487

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALT+SGKLYAFGAGDKGQLG ELV  Q+ERG PERV+IDLS
Sbjct: 488 WNAHTFALTDSGKLYAFGAGDKGQLGTELVAQQSERGTPERVEIDLS 534



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 137/292 (46%), Gaps = 30/292 (10%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLV 89
           G  V  TP    SL+ I I+QAA G   T ++S  G VY F   S+G + + G Q     
Sbjct: 236 GSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTF---SWGNDMKLGHQTEPND 292

Query: 90  TSPQLVE-SLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPH 145
             P L+   L+NI VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P 
Sbjct: 293 VQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 352

Query: 146 PLLGTLE--NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            L+   +  NI  V +AAG  +   +        V + G G  G LGHG+   E  P+++
Sbjct: 353 -LIEQFQALNIQPVVVAAGAWHAAVVG---KDGRVCTWGWGRYGCLGHGNEECESVPKVV 408

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-----GNEECESV--PKV 256
           E   L+N++ + VA G +   VV   G V ++G G    LGH     GN    +V  P++
Sbjct: 409 E--SLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 257 VQALN----DVKAIHVATGDY---TTFVVSEDGDVYSFGCGESASLGHNAIA 301
           V +L      V  I +    Y    TF +++ G +Y+FG G+   LG   +A
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVA 518



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 17/193 (8%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           +G AVY+ G    G+LGHGS  +E  PR+I   Q + +  +  AAGA    +V   GRV 
Sbjct: 163 TGGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--IQAAAGAGRTMLVSDAGRVY 220

Query: 234 TWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            +G   +G + +  +    V  P++V++L D+  +  A G++ T V+S +G VY+F  G 
Sbjct: 221 AFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTFSWGN 280

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-K 350
              LGH            N + P L+    + N  VVQI+   + Y      A   SG  
Sbjct: 281 DMKLGHQT--------EPNDVQPHLLAGPLE-NIPVVQIA---AGYCYLLALACQPSGMS 328

Query: 351 LYAFGAGDKGQLG 363
           +Y+ G G  G+LG
Sbjct: 329 VYSVGCGLGGKLG 341



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G    G LGHG+ E E  P+++++L  ++ I  A G   T +
Sbjct: 153 AGPGHSIAVTTGGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTML 212

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG     S G    A  QG+R   V TPQLV SLK +   +VQ ++ N   
Sbjct: 213 VSDAGRVYAFG---KDSFGEVEYA-AQGSR--VVTTPQLVESLKDI--YIVQAAIGNFF- 263

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G +Y F  G+  +LG +   N  +
Sbjct: 264 ----TAVLSREGHVYTFSWGNDMKLGHQTEPNDVQ 294


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/347 (86%), Positives = 323/347 (93%), Gaps = 6/347 (1%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+LQGIRIIQAAAGAGRTML+SD+GQVYAFG     EAEYGVQG+K V +PQ+VES
Sbjct: 188 PRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFG-----EAEYGVQGSKTVAAPQIVES 242

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG+D +LGHHT+ +DVEPHPLLG LENIPVV
Sbjct: 243 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDEKLGHHTDQSDVEPHPLLGALENIPVV 302

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLL LACQPSGM+VYSVGCGLGGKLGHGSRTDE++PRLIEQF LLNLQP+VVA
Sbjct: 303 QIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEEYPRLIEQFGLLNLQPMVVA 362

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL++VKA+HVATGDYTTFV
Sbjct: 363 AGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFV 422

Query: 278 VSEDGDVYSFGCGESASLGHNAIA-DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           VS+DGDVYSFGCG+SASLGHNA   D QGNRHA VL P+LVTSLKQ+NERVVQISLTN  
Sbjct: 423 VSDDGDVYSFGCGQSASLGHNAAGNDEQGNRHAKVLDPELVTSLKQINERVVQISLTNCN 482

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YWNAHTFALTESGKLYAFGAGDKGQLGIELV NQTERGNPERV+IDL
Sbjct: 483 YWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDL 529


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 291/347 (83%), Positives = 321/347 (92%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EY  QG+++VT+PQLVES
Sbjct: 94  PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVES 153

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+I++VQAAIGNFFTAVLSREG VYTFSWGND +LGH TEPNDV+PH L G LENIPVV
Sbjct: 154 LKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVV 213

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVA
Sbjct: 214 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVA 273

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV++L +V+A+HVATGDYTTFV
Sbjct: 274 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFV 333

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ GDVYSFGCGES+SLGHN I +G  NRH NVL+P+LVTSLK+ NERV QISLTNSIY
Sbjct: 334 VSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVLSPELVTSLKRTNERVAQISLTNSIY 392

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALT+SGKLYAFGAGDKGQLG ELV  ++ERG PERV+IDLS
Sbjct: 393 WNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS 439



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 137/292 (46%), Gaps = 30/292 (10%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLV 89
           G  V  TP    SL+ I I+QAA G   T ++S  G VY F   S+G + + G Q     
Sbjct: 141 GSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTF---SWGNDMKLGHQTEPND 197

Query: 90  TSPQLVES-LKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPH 145
             P L+   L+NI VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P 
Sbjct: 198 VQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 257

Query: 146 PLLGTLE--NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            L+   +  NI  V +AAG  +   +        V + G G  G LGHG+   E  P+++
Sbjct: 258 -LIEQFQALNIQPVVVAAGAWHAAVVG---KDGRVCTWGWGRYGCLGHGNEECESVPKVV 313

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-----GNEECESV--PKV 256
           E   L+N++ V VA G +   VV   G V ++G G    LGH     GN    +V  P++
Sbjct: 314 E--SLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 371

Query: 257 VQALN----DVKAIHVATGDY---TTFVVSEDGDVYSFGCGESASLGHNAIA 301
           V +L      V  I +    Y    TF +++ G +Y+FG G+   LG   +A
Sbjct: 372 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVA 423



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           ++A   SG AVY+ G    G+LGHGS  +E  PR+I   Q + +  +  AAGA    +V 
Sbjct: 63  SIAVTTSG-AVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--IQAAAGAGRTMLVS 119

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
             GRV  +G   +G + +  +    V  P++V++L D+  +  A G++ T V+S +G VY
Sbjct: 120 DAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVY 179

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +F  G    LGH            N + P L+    + N  VVQI+   + Y      A 
Sbjct: 180 TFSWGNDMKLGHQT--------EPNDVQPHLLAGPLE-NIPVVQIA---AGYCYLLALAC 227

Query: 346 TESG-KLYAFGAGDKGQLG 363
             SG  +Y+ G G  G+LG
Sbjct: 228 QPSGMSVYSVGCGLGGKLG 246



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G    G LGHG+ E E  P+++++L  ++ I  A G   T +
Sbjct: 58  AGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTML 117

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG     S G    A  QG+R   V TPQLV SLK +   +VQ ++ N   
Sbjct: 118 VSDAGRVYAFG---KDSFGEVEYA-AQGSR--VVTTPQLVESLKDI--YIVQAAIGNFF- 168

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G +Y F  G+  +LG +   N  +
Sbjct: 169 ----TAVLSREGHVYTFSWGNDMKLGHQTEPNDVQ 199


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/347 (83%), Positives = 321/347 (92%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE EY  QG+++VT+PQLVES
Sbjct: 189 PRIIRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVES 248

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+I++VQAAIGNFFTAVLSREG VYTFSWGND +LGH TEPNDV+PH L G LENIPVV
Sbjct: 249 LKDIYIVQAAIGNFFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENIPVV 308

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHGSRTDEK+PRLIEQFQ LN+QPVVVA
Sbjct: 309 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVA 368

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV++L +V+A+HVATGDYTTFV
Sbjct: 369 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFV 428

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ GDVYSFGCGES+SLGHN I +G  NRH NVL+P+LVTSLK+ NERV QISLTNSIY
Sbjct: 429 VSDKGDVYSFGCGESSSLGHNTITEGN-NRHTNVLSPELVTSLKRTNERVAQISLTNSIY 487

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALT+SGKLYAFGAGDKGQLG ELV  ++ERG PERV+IDLS
Sbjct: 488 WNAHTFALTDSGKLYAFGAGDKGQLGTELVAQESERGTPERVEIDLS 534



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 137/292 (46%), Gaps = 30/292 (10%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLV 89
           G  V  TP    SL+ I I+QAA G   T ++S  G VY F   S+G + + G Q     
Sbjct: 236 GSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVYTF---SWGNDMKLGHQTEPND 292

Query: 90  TSPQLVE-SLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPH 145
             P L+   L+NI VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P 
Sbjct: 293 VQPHLLAGPLENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPR 352

Query: 146 PLLGTLE--NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            L+   +  NI  V +AAG  +   +        V + G G  G LGHG+   E  P+++
Sbjct: 353 -LIEQFQALNIQPVVVAAGAWHAAVVG---KDGRVCTWGWGRYGCLGHGNEECESVPKVV 408

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-----GNEECESV--PKV 256
           E   L+N++ V VA G +   VV   G V ++G G    LGH     GN    +V  P++
Sbjct: 409 E--SLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITEGNNRHTNVLSPEL 466

Query: 257 VQALN----DVKAIHVATGDY---TTFVVSEDGDVYSFGCGESASLGHNAIA 301
           V +L      V  I +    Y    TF +++ G +Y+FG G+   LG   +A
Sbjct: 467 VTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTELVA 518



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           ++A   SG AVY+ G    G+LGHGS  +E  PR+I   Q + +  +  AAGA    +V 
Sbjct: 158 SIAVTTSG-AVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--IQAAAGAGRTMLVS 214

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
             GRV  +G   +G + +  +    V  P++V++L D+  +  A G++ T V+S +G VY
Sbjct: 215 DAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVY 274

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +F  G    LGH            N + P L+    + N  VVQI+   + Y      A 
Sbjct: 275 TFSWGNDMKLGHQT--------EPNDVQPHLLAGPLE-NIPVVQIA---AGYCYLLALAC 322

Query: 346 TESG-KLYAFGAGDKGQLG 363
             SG  +Y+ G G  G+LG
Sbjct: 323 QPSGMSVYSVGCGLGGKLG 341



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G    G LGHG+ E E  P+++++L  ++ I  A G   T +
Sbjct: 153 AGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRIIQAAAGAGRTML 212

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG     S G    A  QG+R   V TPQLV SLK +   +VQ ++ N   
Sbjct: 213 VSDAGRVYAFG---KDSFGEVEYA-AQGSR--VVTTPQLVESLKDI--YIVQAAIGNFF- 263

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G +Y F  G+  +LG +   N  +
Sbjct: 264 ----TAVLSREGHVYTFSWGNDMKLGHQTEPNDVQ 294


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 294/343 (85%), Positives = 317/343 (92%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           RSLQG+RIIQAAAGA RTMLISD G+VYA GK+SFGEAEYG QGTK VT+PQLV SLKNI
Sbjct: 190 RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI 249

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           FVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE  DVEP PLLG LEN+PVVQIAA
Sbjct: 250 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           GYCYLLALACQP+GM+VYSVGCGLGGKLGHGSRTDEK+PR+IEQFQ+LNLQP VVAAGAW
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 369

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ L+ VKA+HVATGDYTTFVVS+D
Sbjct: 370 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDD 429

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           GDVYSFGCGESASLGH+   D QGNRHANVL+P +VTSLKQVNER+VQISLTNSIYWNAH
Sbjct: 430 GDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH 489

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           TFALTESGKL+AFGAGD+GQLG EL  NQ ER  PE+VDIDLS
Sbjct: 490 TFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDIDLS 532



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 89/160 (55%), Gaps = 18/160 (11%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G+   G LGHG+ E E+  + V++L  V+ I  A G   T +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+DG VY+  CG+  S G  A   GQG +   V TPQLVTSLK +   VVQ ++ N  Y
Sbjct: 210 ISDDGKVYA--CGKE-SFGE-AEYGGQGTK--PVTTPQLVTSLKNI--FVVQAAIGN--Y 259

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
           + A    L+  GK+Y F  G+ G+LG     +QTE  + E
Sbjct: 260 FTA---VLSREGKVYTFSWGNDGRLG-----HQTEAADVE 291



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 31/282 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    SL+ I ++QAA G   T ++S  G+VY F   + G   +  +   +   P L+ 
Sbjct: 239 TPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRP-LLG 297

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            L+N+ VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P      +E 
Sbjct: 298 PLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPR----VIEQ 353

Query: 154 IPVV----QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
             ++    ++ A   +  A+  Q   +  +  G G  G LGHG+   E  P+++E   L 
Sbjct: 354 FQILNLQPRVVAAGAWHAAVVGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVE--GLS 409

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKVVQALN 261
           +++ V VA G +   VV  DG V ++G G    LGH       GN     + P VV +L 
Sbjct: 410 HVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLK 469

Query: 262 DVKAIHVATG-------DYTTFVVSEDGDVYSFGCGESASLG 296
            V    V          +  TF ++E G +++FG G+   LG
Sbjct: 470 QVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 13/125 (10%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFG-EAEYGVQGTK 87
            E    P     L  ++ +  A G   T ++SD G VY+FG     S G    +  QG +
Sbjct: 396 EECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNR 455

Query: 88  L--VTSPQLVESLK--NIFVVQAAIGNFF-----TAVLSREGRVYTFSWGNDARLGHHTE 138
              V SP +V SLK  N  +VQ ++ N       T  L+  G+++ F  G+  +LG    
Sbjct: 456 HANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELG 515

Query: 139 PNDVE 143
            N  E
Sbjct: 516 KNQKE 520


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 294/343 (85%), Positives = 317/343 (92%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           RSLQG+RIIQAAAGA RTMLISD G+VYA GK+SFGEAEYG QGTK VT+PQLV SLKNI
Sbjct: 90  RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI 149

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           FVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE  DVEP PLLG LEN+PVVQIAA
Sbjct: 150 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 209

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           GYCYLLALACQP+GM+VYSVGCGLGGKLGHGSRTDEK+PR+IEQFQ+LNLQP VVAAGAW
Sbjct: 210 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 269

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ L+ VKA+HVATGDYTTFVVS+D
Sbjct: 270 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDD 329

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           GDVYSFGCGESASLGH+   D QGNRHANVL+P +VTSLKQVNER+VQISLTNSIYWNAH
Sbjct: 330 GDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAH 389

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           TFALTESGKL+AFGAGD+GQLG EL  NQ ER  PE+VDIDLS
Sbjct: 390 TFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDIDLS 432



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    SL+ I ++QAA G   T ++S  G+VY F   + G   +  +   +   P L+ 
Sbjct: 139 TPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRP-LLG 197

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLG-TLE 152
            L+N+ VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P  +    + 
Sbjct: 198 PLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQIL 257

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           N+    +AAG  +  A+  Q   +  +  G G  G LGHG+   E  P+++E   L +++
Sbjct: 258 NLQPRVVAAG-AWHAAVVGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVE--GLSHVK 312

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKVVQALNDVK 264
            V VA G +   VV  DG V ++G G    LGH       GN     + P VV +L  V 
Sbjct: 313 AVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVN 372

Query: 265 AIHVATG-------DYTTFVVSEDGDVYSFGCGESASLG 296
              V          +  TF ++E G +++FG G+   LG
Sbjct: 373 ERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 411



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 87/160 (54%), Gaps = 18/160 (11%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G+   G LGHG+ E E+  + V++L  V+ I  A G   T +
Sbjct: 50  AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+DG VY+  CG+  S G  A   GQG +   V TPQLVTSLK +   VVQ ++ N   
Sbjct: 110 ISDDGKVYA--CGKE-SFG-EAEYGGQGTK--PVTTPQLVTSLKNI--FVVQAAIGNYF- 160

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
               T  L+  GK+Y F  G+ G+LG     +QTE  + E
Sbjct: 161 ----TAVLSREGKVYTFSWGNDGRLG-----HQTEAADVE 191



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFG-EAEYGVQGTKL 88
           E    P     L  ++ +  A G   T ++SD G VY+FG     S G    +  QG + 
Sbjct: 297 ECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRH 356

Query: 89  --VTSPQLVESLK--NIFVVQAAIGNFF-----TAVLSREGRVYTFSWGNDARLGHHTEP 139
             V SP +V SLK  N  +VQ ++ N       T  L+  G+++ F  G+  +LG     
Sbjct: 357 ANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGK 416

Query: 140 NDVE 143
           N  E
Sbjct: 417 NQKE 420


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 294/343 (85%), Positives = 316/343 (92%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           RSLQGIRIIQAAAGA RTMLISD G+VYA GK+SFGEAEYG QGT+ VT+PQLV SLKNI
Sbjct: 191 RSLQGIRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTQPVTTPQLVTSLKNI 250

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           FVVQAAIGN+FTAVLSREG+VYTFSWGND RLGH TE  DVEP PLLG LEN+PVVQIAA
Sbjct: 251 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 310

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           GYCYLLALACQP+GM+VYSVGCGLGGKLGHGSRTDEK+PR+IEQF++LNLQP VVAAGAW
Sbjct: 311 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAW 370

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV+ LN VKA+HVATGDYTTFVVS+D
Sbjct: 371 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLNHVKAVHVATGDYTTFVVSDD 430

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           GDVYSFGCGESASLGH+   D QGNRHANVL+P +VTSLKQ NERVVQISLTNSIYWNAH
Sbjct: 431 GDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLKQANERVVQISLTNSIYWNAH 490

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           TFALTESGKLYAFGAGD+GQLG EL  N+ ER  PE+VDIDLS
Sbjct: 491 TFALTESGKLYAFGAGDQGQLGAELDRNRKERCVPEKVDIDLS 533



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 31/282 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    SL+ I ++QAA G   T ++S  G+VY F   + G   +  +   +   P L+ 
Sbjct: 240 TPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRP-LLG 298

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            L+N+ VVQ A G  +   L+ +     VY+   G   +LGH +  ++  P      +E 
Sbjct: 299 PLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPR----VIEQ 354

Query: 154 IPVV----QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
             ++    ++ A   +  A+  Q   +  +  G G  G LGHG+   E  P+++E   L 
Sbjct: 355 FKILNLQPRVVAAGAWHAAVVGQDGRVCTW--GWGRYGCLGHGNEECESVPKVVE--GLN 410

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-------GNEECESV-PKVVQALN 261
           +++ V VA G +   VV  DG V ++G G    LGH       GN     + P VV +L 
Sbjct: 411 HVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPAVVTSLK 470

Query: 262 D----VKAIHVATGDY---TTFVVSEDGDVYSFGCGESASLG 296
                V  I +    Y    TF ++E G +Y+FG G+   LG
Sbjct: 471 QANERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDQGQLG 512



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 18/160 (11%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V T+G+   G LGHG+ E ++  + V++L  ++ I  A G   T +
Sbjct: 151 AGPGHSIAVTSKGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTML 210

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+DG VY+  CG+  S G  A   GQG +   V TPQLVTSLK +   VVQ ++ N  Y
Sbjct: 211 ISDDGKVYA--CGKE-SFGE-AEYGGQGTQ--PVTTPQLVTSLKNI--FVVQAAIGN--Y 260

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
           + A    L+  GK+Y F  G+ G+LG     +QTE  + E
Sbjct: 261 FTA---VLSREGKVYTFSWGNDGRLG-----HQTEAADVE 292



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 13/124 (10%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFG-EAEYGVQGTKL 88
           E    P     L  ++ +  A G   T ++SD G VY+FG     S G    +  QG + 
Sbjct: 398 ECESVPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRH 457

Query: 89  --VTSPQLVESLK--NIFVVQAAIGNFF-----TAVLSREGRVYTFSWGNDARLGHHTEP 139
             V SP +V SLK  N  VVQ ++ N       T  L+  G++Y F  G+  +LG   + 
Sbjct: 458 ANVLSPAVVTSLKQANERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDQGQLGAELDR 517

Query: 140 NDVE 143
           N  E
Sbjct: 518 NRKE 521


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 283/347 (81%), Positives = 320/347 (92%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQGIRIIQAAAGAGRTML+SDAG+VYAFGKDSFGE E+G QG++ V +PQ+VES
Sbjct: 189 PRPVRSLQGIRIIQAAAGAGRTMLVSDAGRVYAFGKDSFGEVEFGNQGSRAVATPQMVES 248

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+I++VQAAIGNFFTAVLSREG VYTFSWG+D +LGH TEPNDV+PH L G LENIPVV
Sbjct: 249 LKDIYIVQAAIGNFFTAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENIPVV 308

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLALACQPSGM+VYSVGCGLGGKLGHG+RTDEK+PRLIEQFQ LN+QP+VVA
Sbjct: 309 QIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVA 368

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECESVPKVV+AL+ VKA++VATGDYTTF+
Sbjct: 369 AGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSSVKAVYVATGDYTTFI 428

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS  GDVYSFGCGES+SLGHN   +G  NRH+NVL+P+LVTSL+  NE+VVQ+SLTNS+Y
Sbjct: 429 VSCKGDVYSFGCGESSSLGHNTTIEGN-NRHSNVLSPELVTSLQSKNEKVVQVSLTNSVY 487

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           WNAHTFALTESGKLYAFGAGDKGQLG ELV+ ++ERG PERV+IDLS
Sbjct: 488 WNAHTFALTESGKLYAFGAGDKGQLGSELVSQESERGTPERVEIDLS 534



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           ++A   SG A Y+ G    G+LGH S  +E  PR +   Q + +  +  AAGA    +V 
Sbjct: 158 SIAVSTSG-AAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--IQAAAGAGRTMLVS 214

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
             GRV  +G   +G +  GN+   +V  P++V++L D+  +  A G++ T V+S +G VY
Sbjct: 215 DAGRVYAFGKDSFGEVEFGNQGSRAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +F  G    LGH            N + P L+T   + N  VVQI+   + Y      A 
Sbjct: 275 TFSWGSDMKLGHQT--------EPNDVQPHLLTGPLE-NIPVVQIA---AGYCYLLALAC 322

Query: 346 TESG-KLYAFGAGDKGQLG 363
             SG  +Y+ G G  G+LG
Sbjct: 323 QPSGMSVYSVGCGLGGKLG 341



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 25/265 (9%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           QA  G   +  +S  G  YTF   N  +LGH +   +  P P+  +L+ I ++Q AAG  
Sbjct: 150 QAIAGPGHSIAVSTSGAAYTFGSNNSGQLGHASLEEEWRPRPVR-SLQGIRIIQAAAGAG 208

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWH 222
             + ++       VY+ G    G++  G++       P+++E   L ++  V  A G + 
Sbjct: 209 RTMLVS---DAGRVYAFGKDSFGEVEFGNQGSRAVATPQMVE--SLKDIYIVQAAIGNFF 263

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVS-- 279
            AV+ ++G V T+ WG    LGH  E  +  P ++   L ++  + +A G      ++  
Sbjct: 264 TAVLSREGCVYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENIPVVQIAAGYCYLLALACQ 323

Query: 280 -EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
                VYS GCG    LGH    D +         P+L+   + +N   +Q  +  +  W
Sbjct: 324 PSGMSVYSVGCGLGGKLGHGTRTDEK--------YPRLIEQFQTLN---IQPIVVAAGAW 372

Query: 339 NAHTFALTESGKLYAFGAGDKGQLG 363
             H   + + G++  +G G  G LG
Sbjct: 373 --HAAVVGKDGRVCTWGWGRYGCLG 395



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G   T+G    G LGH + E E  P+ V++L  ++ I  A G   T +
Sbjct: 153 AGPGHSIAVSTSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRIIQAAAGAGRTML 212

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ G VY+FG     S G     + QG+R   V TPQ+V SLK +   +VQ ++ N   
Sbjct: 213 VSDAGRVYAFG---KDSFGEVEFGN-QGSR--AVATPQMVESLKDI--YIVQAAIGNFF- 263

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               T  L+  G +Y F  G   +LG +   N  +
Sbjct: 264 ----TAVLSREGCVYTFSWGSDMKLGHQTEPNDVQ 294


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 269/346 (77%), Positives = 303/346 (87%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+LQGIRIIQA A  GRTMLISD+GQVYAFGK  F E E G +G+K+VT+PQLVES
Sbjct: 188 PRPIRALQGIRIIQATAATGRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVES 247

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQAAIGN+FTAVLSREGRVYTFSWG+D +L H T+PNDVEP PLLG LE+IPVV
Sbjct: 248 LKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVV 307

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAG+CYLL LACQPSGM+VYSVGCG+GGKLGHG+ TDEK+PRLIEQFQLLNLQP+V+A
Sbjct: 308 QIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIA 367

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG+WHAAVVGQDGRVCTWGWGR+GCLGHGNEEC  VPKVV+ L +VKA+HVA GDYTTFV
Sbjct: 368 AGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEECALVPKVVEELKNVKAVHVAAGDYTTFV 427

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           VS+ GD YSFG GES +LGH+     Q + HA+VLTP+LVTS+KQ  ERV+QISLTNS+Y
Sbjct: 428 VSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVTSMKQNYERVIQISLTNSVY 487

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           W AHTFALTESGKLYAFGAGDKGQLG+EL   QTER  P+RVDIDL
Sbjct: 488 WIAHTFALTESGKLYAFGAGDKGQLGVELRPYQTERRKPQRVDIDL 533



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F   S G+  +      +  
Sbjct: 235 GSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEP 294

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L++I VVQ A G  +   L+ +     VY+   G   +LGH TE ++  P  +
Sbjct: 295 RP-LLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKLGHGTETDEKYPRLI 353

Query: 148 LG-TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
               L N+  + IAAG  +  A+  Q   +  +  G G  G LGHG+      P+++E  
Sbjct: 354 EQFQLLNLQPMVIAAG-SWHAAVVGQDGRVCTW--GWGRHGCLGHGNEECALVPKVVE-- 408

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--------VPKVVQ 258
           +L N++ V VAAG +   VV   G   ++G+G  G LGH  E  E          PK+V 
Sbjct: 409 ELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHADVLTPKLVT 468

Query: 259 AL--NDVKAIHVATGDYT-----TFVVSEDGDVYSFGCGESASLG 296
           ++  N  + I ++  +       TF ++E G +Y+FG G+   LG
Sbjct: 469 SMKQNYERVIQISLTNSVYWIAHTFALTESGKLYAFGAGDKGQLG 513



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 13/157 (8%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V AG  H+  V   G V ++G    G LGHG  E    P+ ++AL  ++ I        T
Sbjct: 150 VIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRIIQATAATGRT 209

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            ++S+ G VY+FG         N I + +G++   V TPQLV SLK  N  VVQ ++ N 
Sbjct: 210 MLISDSGQVYAFG---KQYFCENEIGN-EGSKM--VTTPQLVESLK--NIFVVQAAIGN- 260

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            Y+ A    L+  G++Y F  G  G+L  +   N  E
Sbjct: 261 -YFTA---VLSREGRVYTFSWGSDGKLCHQTDPNDVE 293



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 24/211 (11%)

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           Q+ AG  + +A+    S   VYS G    G+LGHG+  D   PR I   Q + +     A
Sbjct: 149 QVIAGPGHSIAVT---SKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRIIQATAA 205

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGC---LGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            G     ++   G+V  +G  +Y C   +G+   +  + P++V++L ++  +  A G+Y 
Sbjct: 206 TG--RTMLISDSGQVYAFG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYF 262

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ-LVTSLKQVNERVVQISLT 333
           T V+S +G VY+F  G    L H            N + P+ L+ +L+ +   VVQI+  
Sbjct: 263 TAVLSREGRVYTFSWGSDGKLCHQT--------DPNDVEPRPLLGALEHIP--VVQIA-- 310

Query: 334 NSIYWNAHTFALTESG-KLYAFGAGDKGQLG 363
            + +      A   SG  +Y+ G G  G+LG
Sbjct: 311 -AGFCYLLCLACQPSGMSVYSVGCGMGGKLG 340


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/347 (77%), Positives = 304/347 (87%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVE 96
           P   R+LQGIRIIQA A  GRTMLISD+GQ Y FGK+SFGE E  V +G+K+VT+PQLVE
Sbjct: 188 PRPIRALQGIRIIQATAMTGRTMLISDSGQAYVFGKESFGEVETIVNRGSKIVTTPQLVE 247

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG   +L H T+ NDVEP PLLG LE+IPV
Sbjct: 248 SLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPRPLLGALEHIPV 307

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           VQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLGHG++T+E++PRLIEQFQLLNLQP+ +
Sbjct: 308 VQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAI 367

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEECE VPKVV+ L +VKA+HVATGD+TTF
Sbjct: 368 AAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEELRNVKAVHVATGDFTTF 427

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           VVS+ GDVYSFG GES SLGH      Q + H NVLTP+LVT +KQ+NERVVQISLTN I
Sbjct: 428 VVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFI 487

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YWNAHTFALTESGKLYAFGAGDKGQLG+EL  +QTE+G PERVDIDL
Sbjct: 488 YWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQTEKGKPERVDIDL 534



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F     G+  +      +  
Sbjct: 236 GSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEP 295

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L++I VVQ A G  +   L+ +     VY+   G   +LGH T+ N+  P  +
Sbjct: 296 RP-LLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLI 354

Query: 148 LG-TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
               L N+  + IAAG  +  A+  Q   +  +  G G  G LGHG+   E  P+++E  
Sbjct: 355 EQFQLLNLQPMAIAAG-SWHAAVVGQDGRVCTW--GWGSYGCLGHGNEECELVPKVVE-- 409

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--------VPKVVQ 258
           +L N++ V VA G +   VV   G V ++G+G  G LGH  E  E          PK+V 
Sbjct: 410 ELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 469

Query: 259 ALNDV--KAIHVATGDYT-----TFVVSEDGDVYSFGCGESASLG 296
            +  +  + + ++  ++      TF ++E G +Y+FG G+   LG
Sbjct: 470 WMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 514


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/347 (77%), Positives = 304/347 (87%), Gaps = 1/347 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVE 96
           P   R+LQGIRIIQA A  GRTMLISD+GQ Y FGK+SFGE E  V +G+K+VT+PQLVE
Sbjct: 192 PRPIRALQGIRIIQATAMTGRTMLISDSGQAYVFGKESFGEVETIVNRGSKIVTTPQLVE 251

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SLKNIFVVQAA+GN+FTAVLSREGRVYTFSWG   +L H T+ NDVEP PLLG LE+IPV
Sbjct: 252 SLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEPRPLLGALEHIPV 311

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           VQIAAG+CYLL LACQPSGM+VYSVGCGLGGKLGHG++T+E++PRLIEQFQLLNLQP+ +
Sbjct: 312 VQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAI 371

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG+WHAAVVGQDGRVCTWGWG YGCLGHGNEECE VPKVV+ L +VKA+HVATGD+TTF
Sbjct: 372 AAGSWHAAVVGQDGRVCTWGWGSYGCLGHGNEECELVPKVVEELRNVKAVHVATGDFTTF 431

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           VVS+ GDVYSFG GES SLGH      Q + H NVLTP+LVT +KQ+NERVVQISLTN I
Sbjct: 432 VVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVTWMKQINERVVQISLTNFI 491

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YWNAHTFALTESGKLYAFGAGDKGQLG+EL  +QTE+G PERVDIDL
Sbjct: 492 YWNAHTFALTESGKLYAFGAGDKGQLGVELGAHQTEKGKPERVDIDL 538



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G ++  TP    SL+ I ++QAA G   T ++S  G+VY F     G+  +      +  
Sbjct: 240 GSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTFSWGCVGKLCHQTDQNDVEP 299

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREG---RVYTFSWGNDARLGHHTEPNDVEPHPL 147
            P L+ +L++I VVQ A G  +   L+ +     VY+   G   +LGH T+ N+  P  +
Sbjct: 300 RP-LLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGLGGKLGHGTKTNEEYPRLI 358

Query: 148 LG-TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
               L N+  + IAAG  +  A+  Q   +  +  G G  G LGHG+   E  P+++E  
Sbjct: 359 EQFQLLNLQPMAIAAG-SWHAAVVGQDGRVCTW--GWGSYGCLGHGNEECELVPKVVE-- 413

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--------VPKVVQ 258
           +L N++ V VA G +   VV   G V ++G+G  G LGH  E  E          PK+V 
Sbjct: 414 ELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQEDMHENVLTPKLVT 473

Query: 259 ALNDV--KAIHVATGDYT-----TFVVSEDGDVYSFGCGESASLG 296
            +  +  + + ++  ++      TF ++E G +Y+FG G+   LG
Sbjct: 474 WMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLG 518


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/348 (74%), Positives = 301/348 (86%), Gaps = 1/348 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQG+RIIQA AG GRTMLISD G+VYAFGKDSFG+ EYG  G+K + +PQ+VES
Sbjct: 192 PRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFGKDSFGDPEYGGPGSKNINTPQIVES 251

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+LGH TEP D +P  L G LEN PVV
Sbjct: 252 LNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVV 311

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG+R+DE+ P++IE FQ L LQP+ VA
Sbjct: 312 QIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVA 371

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE +PKVV++L  VKA+HVATGDYTTFV
Sbjct: 372 AGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFV 431

Query: 278 VSEDGDVYSFGCGESASLGH-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V++ G+V+S GCGES+SLGH +   +GQ NRHANVL P+LV+SLKQ NE+V+QISLTNS+
Sbjct: 432 VTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSV 491

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
            WNAHTFAL +SG+L+AFGAGDKGQLG EL++N++ERG PE VDIDLS
Sbjct: 492 TWNAHTFALCDSGRLFAFGAGDKGQLGTELLDNESERGTPELVDIDLS 539



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 33/302 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLVTSPQLV 95
           TP    SL GI ++QAA G   T ++S  G+VY F   S+G +A+ G Q       PQL+
Sbjct: 245 TPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTF---SWGADAKLGHQTEPEDQKPQLL 301

Query: 96  E-SLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
             +L+N  VVQ A G  +   L+ +     VY+   G   +LGH T  ++  P  ++   
Sbjct: 302 RGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPK-MIEHF 360

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +++ +  IA       A      G  V + G G  G LGHG+   E  P+++E  Q   +
Sbjct: 361 QHLRLQPIAVAAGAWHAAVVSEDGR-VCTWGWGRYGCLGHGNEDCELLPKVVESLQ--GV 417

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---------VPKVVQALN- 261
           + V VA G +   VV   G V + G G    LGH +   E           P++V +L  
Sbjct: 418 KAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQ 477

Query: 262 -DVKAIHVA-----TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            + K + ++     T +  TF + + G +++FG G+   LG   + D +  R     TP+
Sbjct: 478 RNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDKGQLG-TELLDNESERG----TPE 532

Query: 316 LV 317
           LV
Sbjct: 533 LV 534



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVY+ G    G+LGHGS  +E  PRL+   Q + +  +   AG     ++   GRV  +G
Sbjct: 169 AVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--IQATAGVGRTMLISDTGRVYAFG 226

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G    +++  P++V++LN +  +  A G++ T V+S +G VY+F  G  A 
Sbjct: 227 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 286

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH    + Q         PQL+    + N+ VVQI+     Y  A T   T    +Y+ 
Sbjct: 287 LGHQTEPEDQ--------KPQLLRGALE-NKPVVQIA-AGYCYLLALTCQSTGMA-VYSV 335

Query: 355 GAGDKGQLG 363
           G G  G+LG
Sbjct: 336 GCGLGGKLG 344



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 13/152 (8%)

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           + +   AG  H+ VV + G V T+G    G LGHG+ + E  P+++++L  V+ I    G
Sbjct: 150 EKIQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAG 209

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T ++S+ G VY+FG     S G      G G++  N+ TPQ+V SL  +   VVQ +
Sbjct: 210 VGRTMLISDTGRVYAFG---KDSFGDPEYG-GPGSK--NINTPQIVESLNGIF--VVQAA 261

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + N       T  L+  G++Y F  G   +LG
Sbjct: 262 IGNFF-----TAVLSREGRVYTFSWGADAKLG 288


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/348 (74%), Positives = 301/348 (86%), Gaps = 1/348 (0%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSLQG+RIIQA AG GRTMLISD G+VYAFGKDSFG+ EYG  G+K + +PQ+VES
Sbjct: 161 PRLLRSLQGVRIIQATAGVGRTMLISDTGRVYAFGKDSFGDPEYGGPGSKNINTPQIVES 220

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  IFVVQAAIGNFFTAVLSREGRVYTFSWG DA+LGH TEP D +P  L G LEN PVV
Sbjct: 221 LNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVV 280

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIAAGYCYLLAL CQ +GMAVYSVGCGLGGKLGHG+R+DE+ P++IE FQ L LQP+ VA
Sbjct: 281 QIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVA 340

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AGAWHAAVV +DGRVCTWGWGRYGCLGHGNE+CE +PKVV++L  VKA+HVATGDYTTFV
Sbjct: 341 AGAWHAAVVSEDGRVCTWGWGRYGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFV 400

Query: 278 VSEDGDVYSFGCGESASLGH-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V++ G+V+S GCGES+SLGH +   +GQ NRHANVL P+LV+SLKQ NE+V+QISLTNS+
Sbjct: 401 VTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSV 460

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
            WNAHTFAL +SG+L+AFGAGDKGQLG EL++N++ERG PE VDI+LS
Sbjct: 461 TWNAHTFALCDSGRLFAFGAGDKGQLGTELLDNESERGTPELVDINLS 508



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 33/302 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLVTSPQLV 95
           TP    SL GI ++QAA G   T ++S  G+VY F   S+G +A+ G Q       PQL+
Sbjct: 214 TPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTF---SWGADAKLGHQTEPEDQKPQLL 270

Query: 96  E-SLKNIFVVQAAIGNFFTAVLSREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
             +L+N  VVQ A G  +   L+ +     VY+   G   +LGH T  ++  P  ++   
Sbjct: 271 RGALENKPVVQIAAGYCYLLALTCQSTGMAVYSVGCGLGGKLGHGTRSDERWPK-MIEHF 329

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +++ +  IA       A      G  V + G G  G LGHG+   E  P+++E  Q   +
Sbjct: 330 QHLRLQPIAVAAGAWHAAVVSEDGR-VCTWGWGRYGCLGHGNEDCELLPKVVESLQ--GV 386

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---------VPKVVQALN- 261
           + V VA G +   VV   G V + G G    LGH +   E           P++V +L  
Sbjct: 387 KAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSGATEGQANRHANVLRPELVSSLKQ 446

Query: 262 -DVKAIHVA-----TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            + K + ++     T +  TF + + G +++FG G+   LG   + D +  R     TP+
Sbjct: 447 RNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDKGQLG-TELLDNESERG----TPE 501

Query: 316 LV 317
           LV
Sbjct: 502 LV 503



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVY+ G    G+LGHGS  +E  PRL+   Q   ++ +   AG     ++   GRV  +G
Sbjct: 138 AVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQ--GVRIIQATAGVGRTMLISDTGRVYAFG 195

Query: 237 WGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
              +G   +G    +++  P++V++LN +  +  A G++ T V+S +G VY+F  G  A 
Sbjct: 196 KDSFGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREGRVYTFSWGADAK 255

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH    + Q         PQL+    + N+ VVQI+     Y  A T   T    +Y+ 
Sbjct: 256 LGHQTEPEDQ--------KPQLLRGALE-NKPVVQIA-AGYCYLLALTCQSTGMA-VYSV 304

Query: 355 GAGDKGQLG 363
           G G  G+LG
Sbjct: 305 GCGLGGKLG 313



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 13/152 (8%)

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           + +   AG  H+ VV + G V T+G    G LGHG+ + E  P+++++L  V+ I    G
Sbjct: 119 EKIQAIAGPGHSIVVTKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRIIQATAG 178

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T ++S+ G VY+FG     S G      G G++  N+ TPQ+V SL  +   VVQ +
Sbjct: 179 VGRTMLISDTGRVYAFG---KDSFGDPEYG-GPGSK--NINTPQIVESLNGIF--VVQAA 230

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + N       T  L+  G++Y F  G   +LG
Sbjct: 231 IGNFF-----TAVLSREGRVYTFSWGADAKLG 257


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/351 (64%), Positives = 266/351 (75%), Gaps = 12/351 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL  RSL GIRIIQAA    RT +ISDAG+VYAFGK  F EA+  V  TKL+T+PQ V+S
Sbjct: 200 PLPVRSLNGIRIIQAAISTDRTFVISDAGEVYAFGKVCFSEAKLEVPETKLITTPQRVKS 259

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  IFVVQAAIGN+FTA+LSREGRVYT SWGND RLGH T+ +   P PLLG LENIPVV
Sbjct: 260 LAEIFVVQAAIGNYFTAILSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVV 319

Query: 158 QIAAGYCYLLALACQPSGMAVYSV---GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
           QIAAG+CYLLALA QP+GM+VYSV     G  G     S   EK+PRLI++F LLN++PV
Sbjct: 320 QIAAGFCYLLALAFQPTGMSVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPV 379

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           +V+AG WHAAVVG+DGRVCTWGWGR+GCLGHG EE E+ PKVV  L DVKA+HVATG YT
Sbjct: 380 MVSAGPWHAAVVGKDGRVCTWGWGRFGCLGHGTEEAENAPKVVDGLKDVKAVHVATGVYT 439

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           TFVVS+DG VYSFG G  A+LG + + +       N LTP+LV+SLK   ER+V +SLTN
Sbjct: 440 TFVVSDDGQVYSFGSG-GANLGQDDVDE-------NTLTPKLVSSLKDTKERMVHVSLTN 491

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV-DIDLS 384
           S     HTFA+TESG LYAFGAG++GQLG+EL  N TER  P +V  IDLS
Sbjct: 492 SGNGTGHTFAMTESGTLYAFGAGNRGQLGVELGENLTERAEPAKVAGIDLS 542



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 17/148 (11%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V   G V ++G+   G LG G  +    P  V++LN ++ I  A     TFV
Sbjct: 164 AGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFV 223

Query: 278 VSEDGDVYSFG--CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
           +S+ G+VY+FG  C   A L        +      + TPQ V SL ++   VVQ ++ N 
Sbjct: 224 ISDAGEVYAFGKVCFSEAKL--------EVPETKLITTPQRVKSLAEI--FVVQAAIGN- 272

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y+ A    L+  G++Y    G+  +LG
Sbjct: 273 -YFTA---ILSREGRVYTLSWGNDERLG 296



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
            E    P     L+ ++ +  A G   T ++SD GQVY+FG       +  V    L  +
Sbjct: 413 EEAENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFGSGGANLGQDDVDENTL--T 470

Query: 92  PQLVESLKN-------IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           P+LV SLK+       + +  +  G   T  ++  G +Y F  GN  +LG
Sbjct: 471 PKLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAFGAGNRGQLG 520


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/367 (56%), Positives = 265/367 (72%), Gaps = 11/367 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L   E    P   RSLQGIRI QAA G+  TML+SD G VYAFGKD+F  AE   
Sbjct: 174 SGQLGLGDSEDRFRPCIIRSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVD 233

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
                +T+P++VESLK +FVVQAAIG +F+AVLSREGRVYTFSWG + RLGH ++P+DVE
Sbjct: 234 DAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDVE 293

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  LL  LE++PV  I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG +T++  P+LI
Sbjct: 294 PR-LLSGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHGCKTNKGMPKLI 352

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           EQFQ L+ +PV +AAG WHAA +G DGRVCTWGWG  GCLGHG+EE ++VP +V+ L DV
Sbjct: 353 EQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGDEEYKAVPTLVEGLRDV 412

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           KA+H++TG+YTTFVV+E+GDVYSFG GES         D +     +  TP +V+SLK +
Sbjct: 413 KAVHLSTGEYTTFVVAENGDVYSFGSGESLVFQE----DDEAEEGPDFSTPSIVSSLKAL 468

Query: 324 NERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
           N++VVQIS TN+ YW      + HTFA+ +SG L AFG G +GQLG++L+    +   P 
Sbjct: 469 NKKVVQISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLGVKLLEGVEKVSVPM 528

Query: 378 RVDIDLS 384
            V I L+
Sbjct: 529 HVPIVLN 535



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 13/148 (8%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V AG  H+ V+  +G V ++G    G LG G+ E    P ++++L  ++    A G   T
Sbjct: 150 VIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCIIRSLQGIRITQAAVGSRWT 209

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VY+F  G+    G   + D     H  + TP++V SLK V   VVQ ++   
Sbjct: 210 MLVSDTGSVYAF--GKDNFRGAEVVDDA----HIQITTPKIVESLKGV--FVVQAAIGG- 260

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y++A    L+  G++Y F  G + +LG
Sbjct: 261 -YFSA---VLSREGRVYTFSWGKEERLG 284


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/365 (57%), Positives = 255/365 (69%), Gaps = 9/365 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   E    P   RSLQ I+I QAA G+ +TML+SD G VYAFGK SF   E    
Sbjct: 247 GQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-D 305

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
               +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   RLGH ++P+DVEP
Sbjct: 306 AADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEP 365

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++  P+LIE
Sbjct: 366 RLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTPKLIE 425

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   +P VVQ L++VK
Sbjct: 426 HFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVK 485

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           A+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  TP LV SLK +N
Sbjct: 486 AVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLN 543

Query: 325 ERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
           ++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L   Q    NPER
Sbjct: 544 DKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPER 603

Query: 379 VDIDL 383
           V IDL
Sbjct: 604 VPIDL 608



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG  H+ VV   G   ++G   +G LG G+ E    P ++++L  +K    A G   T
Sbjct: 222 IVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQT 281

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VY+FG G       +  AD       ++ TP++V SLK V   VVQ ++   
Sbjct: 282 MLVSDTGSVYAFGKGSFVWEELSDAAD-------HITTPKIVESLKGV--FVVQAAIGG- 331

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y++A    L+  G++Y    G   +LG
Sbjct: 332 -YFSAF---LSREGQVYTISWGRTERLG 355


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/365 (57%), Positives = 255/365 (69%), Gaps = 9/365 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   E    P   RSLQ I+I QAA G+ +TML+SD G VYAFGK SF   E    
Sbjct: 175 GQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-D 233

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
               +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   RLGH ++P+DVEP
Sbjct: 234 AADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEP 293

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++  P+LIE
Sbjct: 294 RLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTPKLIE 353

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   +P VVQ L++VK
Sbjct: 354 HFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVK 413

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           A+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  TP LV SLK +N
Sbjct: 414 AVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLN 471

Query: 325 ERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
           ++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L   Q    NPER
Sbjct: 472 DKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPER 531

Query: 379 VDIDL 383
           V IDL
Sbjct: 532 VPIDL 536



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG  H+ VV   G   ++G   +G LG G+ E    P ++++L  +K    A G   T
Sbjct: 150 IVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQT 209

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VY+FG G       +  AD       ++ TP++V SLK V   VVQ ++   
Sbjct: 210 MLVSDTGSVYAFGKGSFVWEELSDAAD-------HITTPKIVESLKGV--FVVQAAIGG- 259

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y++A    L+  G++Y    G   +LG
Sbjct: 260 -YFSAF---LSREGQVYTISWGRTERLG 283


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/365 (57%), Positives = 255/365 (69%), Gaps = 9/365 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   E    P   RSLQGI+I QAA G+ +TML+SD G VYAFGK SF   E    
Sbjct: 272 GQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYAFGKGSFVWEELS-D 330

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
               +T+P++VESLK +FVVQAAIG +F+A LSREG+VYT SWG   RLGH ++P+DVEP
Sbjct: 331 AADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTERLGHSSDPSDVEP 390

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L G LE + V QI+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG + ++   +LIE
Sbjct: 391 RLLSGPLEGVLVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLGHGCKNNKGTTKLIE 450

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            F  L+  PV VAAG WHAA +G DGRVCTWGWG  GCLGHG+EE   +P VVQ L++VK
Sbjct: 451 HFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEYRVLPTVVQGLSNVK 510

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           A+HV+TG+YTTFVVS++GD YSFG  ES ++G     +   +   +  TP LV SLK +N
Sbjct: 511 AVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS--TPSLVESLKVLN 568

Query: 325 ERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
           ++ VQIS TNS YW        HTFAL ESGKLYAFG G KGQLG++L   Q    NPER
Sbjct: 569 DKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLGVKLSEGQERAQNPER 628

Query: 379 VDIDL 383
           V IDL
Sbjct: 629 VPIDL 633



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG  H+ VV   G   ++G   +G LG G+ E    P ++++L  +K    A G   T
Sbjct: 247 IVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQT 306

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VY+FG G       +  AD       ++ TP++V SLK V   VVQ ++   
Sbjct: 307 MLVSDTGSVYAFGKGSFVWEELSDAAD-------HITTPKIVESLKGV--FVVQAAIGG- 356

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y++A    L+  G++Y    G   +LG
Sbjct: 357 -YFSAF---LSREGQVYTISWGRTERLG 380


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/368 (55%), Positives = 262/368 (71%), Gaps = 13/368 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L   E    P   RSLQGIRI QAA G+  TML+SD G VY+FGK+ F  AE  V
Sbjct: 174 SGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRCTMLVSDTGSVYSFGKEDFRVAEL-V 232

Query: 84  QGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            G    +T+P++ ESLK +FVVQAAIG +F+AVLSREGRVYTFSWG   RLGH ++P+DV
Sbjct: 233 DGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWGKAERLGHSSDPSDV 292

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           EP  LL  LE++PV  I+AG CYLL LA QP+GM+VYSVGCGLGGKLGHG +T+   P+L
Sbjct: 293 EPR-LLPGLEDVPVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGKLGHGCKTNNGMPKL 351

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           +EQFQ ++ +PV +AAG WHA  +G DGRVCTWGWG  GCLGHG+EEC +VP VV+ L D
Sbjct: 352 VEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDEECRAVPTVVEGLRD 411

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           VKA+HV+TG+YTTFVV+E+GDVYSFG GES +       D +     +  TP +V+SLK 
Sbjct: 412 VKAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQ----LDDEAEEEPDSSTPSIVSSLKD 467

Query: 323 VNERVVQISLTNSIYW------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           +N++VVQIS TN+ YW      + HTFA+ +SG + AFG G +GQLG++L     +   P
Sbjct: 468 LNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLGVKLHEGVEKVRVP 527

Query: 377 ERVDIDLS 384
             V I L+
Sbjct: 528 MNVPIGLN 535



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V AG  H+ ++  +G V ++G    G LG G+ E    P V+++L  ++    A G   T
Sbjct: 150 VIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRCT 209

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VYSFG           + DG    H  + TP++  SLK V   VVQ ++   
Sbjct: 210 MLVSDTGSVYSFG---KEDFRVAELVDGA---HFQITTPRIEESLKGV--FVVQAAIGG- 260

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Y++A    L+  G++Y F  G   +LG
Sbjct: 261 -YFSA---VLSREGRVYTFSWGKAERLG 284


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  347 bits (889), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 190/373 (50%), Positives = 244/373 (65%), Gaps = 22/373 (5%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L   E    P   RSLQGIRI QAA G+ RTML+SD G VY FG+D F   E+  
Sbjct: 165 SGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRRTMLVSDTGSVYVFGQDIFAGLEFAG 224

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             T   +SP++VESLK IFVVQA++G  F+AVLSREG+VYTF WG+DARLGHH++P D+E
Sbjct: 225 DYT---SSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWGHDARLGHHSDPTDLE 281

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  L    ++  V+QIAAG CYLL L  QP+GM+VYSVGCG GGKLGHG       PR+I
Sbjct: 282 PRLLSVPPKDALVMQIAAGNCYLLMLVYQPTGMSVYSVGCGEGGKLGHGCTISLTIPRMI 341

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-GRYGCLGHGN-EECESVPKVVQALN 261
           +QF+ L ++PV V+AGA+H AV+  DGRV TWGW    GCLGH + +E   +P  V  L 
Sbjct: 342 QQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGHDDKQEYVVLPTAVAGLG 401

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            VKA +++TG  +TFVV+++GDVYSFGC  S +LG  A      +   +V  P+L  +L 
Sbjct: 402 SVKATYISTGYCSTFVVTDNGDVYSFGCDHSRNLGVKA------DVGEDVRIPKLAANLN 455

Query: 322 -QVNERVVQISLTNSIYW----------NAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             +NE+VVQIS TN+  W            HT  LTESG+LY+ G G +GQLG++L   Q
Sbjct: 456 VSLNEKVVQISATNTWDWPSRSQNRITSECHTCVLTESGRLYSLGRGSEGQLGVKLAEGQ 515

Query: 371 TERGNPERVDIDL 383
             R  P+ V IDL
Sbjct: 516 KIRPAPDGVAIDL 528



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 16/148 (10%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V AG  H   V   G V ++G    G LG GN E +  P ++++L  ++    A G   T
Sbjct: 141 VVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRRT 200

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +VS+ G VY FG    A L      +  G+  +   +P++V SLK +   VVQ S+   
Sbjct: 201 MLVSDTGSVYVFGQDIFAGL------EFAGDYTS---SPKVVESLKGI--FVVQASVGGH 249

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 +  L+  G++Y F  G   +LG
Sbjct: 250 F-----SAVLSREGQVYTFCWGHDARLG 272


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/366 (53%), Positives = 252/366 (68%), Gaps = 11/366 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE-YG 82
           +G+  L  RE    P    SLQGIRI QAA G  RTML+SD G VY FG D+FG  + YG
Sbjct: 178 SGQLGLGDRENKFKPCLISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYG 237

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
                 V SP+L+ESLK +FVVQA+IG +F+AVLSREGRVYTFSWG   RLGH +E +DV
Sbjct: 238 GSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDV 297

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           EP  L G L+++ V QIAAG CYLL L+  P+GM+VYS+GCGLGGKLGHG++  E  P+L
Sbjct: 298 EPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNKDFEGVPKL 357

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALN 261
           I  FQ  N++P+ ++AGAWHAAV+ +DGRV TWGW   GCLGHG+ E+C ++P+ V+ LN
Sbjct: 358 IGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTLPRAVEGLN 417

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +VKA+HV+ G++ TFVV+++GDVYSFG   S +LG           + +VL P+  T L 
Sbjct: 418 NVKAVHVSAGEWCTFVVADNGDVYSFGFRGSHNLGFQ----DNDAENEDVLPPKPATLLA 473

Query: 322 QVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
            +NER VQIS T++  WN      HT AL ESG +YAFG G  GQLG++LV  +     P
Sbjct: 474 DLNERFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGVKLVEGKEAMPTP 533

Query: 377 ERVDID 382
            +V ID
Sbjct: 534 VQVAID 539



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 14/149 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V AG  H+ VV   G V ++G    G LG G+ E +  P ++ +L  ++    A G   T
Sbjct: 154 VIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGIRITQAAVGLRRT 213

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL-TPQLVTSLKQVNERVVQISLTN 334
            +VS+ G VY+FG      L      D  G  + N + +P+L+ SLK V   VVQ S+  
Sbjct: 214 MLVSDTGSVYTFGLDTFGWL------DQYGGSNGNCVNSPKLLESLKGV--FVVQASIGG 265

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             Y++A    L+  G++Y F  G   +LG
Sbjct: 266 --YFSA---VLSREGRVYTFSWGRAERLG 289


>gi|224118330|ref|XP_002317792.1| predicted protein [Populus trichocarpa]
 gi|222858465|gb|EEE96012.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 129/139 (92%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL+GIRIIQAAAG GRTMLISDAG+VYAFGKDSFGEAEYG QG+K+VT+PQLVES
Sbjct: 182 PRQIRSLRGIRIIQAAAGPGRTMLISDAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVES 241

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKNIFVVQA IGNFFTAVLSREGRVYTFSWGND R+GH TEPNDVEPHPLLG LENIPVV
Sbjct: 242 LKNIFVVQAVIGNFFTAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLGALENIPVV 301

Query: 158 QIAAGYCYLLALACQPSGM 176
           QIAAGYCYLLALAC PSG+
Sbjct: 302 QIAAGYCYLLALACHPSGI 320



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 13/155 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  V  +G V ++G    G LGHG  E E  P+ +++L  ++ I  A G   T +
Sbjct: 146 AGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRIIQAAAGPGRTML 205

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S+ G VY+FG     S G  A    QG++   V TPQLV SLK        I +  ++ 
Sbjct: 206 ISDAGRVYAFG---KDSFGE-AEYGAQGSKM--VTTPQLVESLK-------NIFVVQAVI 252

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            N  T  L+  G++Y F  G+ G++G +   N  E
Sbjct: 253 GNFFTAVLSREGRVYTFSWGNDGRIGHQTEPNDVE 287



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S  AVYS G    G+LGHG+  +E  PR I   + + +  +  AAG     ++   GRV 
Sbjct: 156 SNGAVYSFGSNSSGQLGHGTTEEEWRPRQIRSLRGIRI--IQAAAGPGRTMLISDAGRVY 213

Query: 234 TWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            +G   +G   +G +  + V  P++V++L ++  +    G++ T V+S +G VY+F  G 
Sbjct: 214 AFGKDSFGEAEYGAQGSKMVTTPQLVESLKNIFVVQAVIGNFFTAVLSREGRVYTFSWGN 273

Query: 292 SASLGH 297
              +GH
Sbjct: 274 DGRIGH 279



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           QA  G   +  ++  G VY+F   +  +LGH T   +  P  +  +L  I ++Q AAG  
Sbjct: 143 QAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGTTEEEWRPRQIR-SLRGIRIIQAAAGPG 201

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWH 222
             + ++       VY+ G    G+  +G++  +    P+L+E  +  N+  V    G + 
Sbjct: 202 RTMLIS---DAGRVYAFGKDSFGEAEYGAQGSKMVTTPQLVESLK--NIFVVQAVIGNFF 256

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATG 271
            AV+ ++GRV T+ WG  G +GH  E  +  P  ++ AL ++  + +A G
Sbjct: 257 TAVLSREGRVYTFSWGNDGRIGHQTEPNDVEPHPLLGALENIPVVQIAAG 306


>gi|388507174|gb|AFK41653.1| unknown [Lotus japonicus]
          Length = 136

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 113/115 (98%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M+VYSVGCGLGGKLGHG+RTDEK PRLIEQFQ+LNLQP+VVAAGAWHAAVVG+DGRVCTW
Sbjct: 1   MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTW 60

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           GWGRYGCLGHGNE+CESVPKVV+AL +VKA++VATGDYTTFVVS+DGDVYSFGCG
Sbjct: 61  GWGRYGCLGHGNEDCESVPKVVEALTNVKAVYVATGDYTTFVVSDDGDVYSFGCG 115



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 17/133 (12%)

Query: 236 GWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           G G  G LGHG    E  P++++     +++ + VA G +   VV +DG V ++G G   
Sbjct: 7   GCGLGGKLGHGTRTDEKFPRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYG 66

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH       GN     + P++V +L  V    V          +  TF +++ G +Y+
Sbjct: 67  CLGH-------GNEDCESV-PKVVEALTNVKAVYVATG-------DYTTFVVSDDGDVYS 111

Query: 354 FGAGDKGQLGIEL 366
           FG G+    GI L
Sbjct: 112 FGCGNLLVSGIML 124



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 92  PQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 148
           P+L+E  +  N+  +  A G +  AV+ ++GRV T+ WG    LGH  E  D E  P ++
Sbjct: 25  PRLIEQFQMLNLQPMVVAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNE--DCESVPKVV 82

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
             L N+  V +A G      ++       VYS GCG
Sbjct: 83  EALTNVKAVYVATGDYTTFVVSDDGD---VYSFGCG 115


>gi|361069249|gb|AEW08936.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|376339101|gb|AFB34079.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339103|gb|AFB34080.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339105|gb|AFB34081.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339107|gb|AFB34082.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339109|gb|AFB34083.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339111|gb|AFB34084.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339113|gb|AFB34085.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
 gi|376339115|gb|AFB34086.1| hypothetical protein CL2350Contig1_01, partial [Pinus cembra]
          Length = 96

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 92/96 (95%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           TDEK+PR+IEQF+LL L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1   TDEKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           KVV++L  VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61  KVVESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 251 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           E  P++++    +K   + +A G +   VV +DG V ++G G    LGH       GN  
Sbjct: 3   EKYPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
              + P++V SL  V      + +T   Y    TF + E+G +Y+FG G
Sbjct: 56  CETV-PKVVESLLAVK----AVHVTTGDY---TTFVVAENGDVYSFGCG 96



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 92  PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           P+++E  K + +  V  A G +  AV+ ++GRV T+ WG    LGH  E  +  P  ++ 
Sbjct: 6   PRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           +L  +  V +  G      +A       VYS GCG
Sbjct: 65  SLLAVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 40  YCRSLQGIRIIQ-----AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           Y R ++  ++++      AAGA    ++   G+V  +G   +G   +G +  +  T P++
Sbjct: 5   YPRMIEQFKLLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE--TVPKV 62

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           VESL  +  V    G++ T V++  G VY+F  G
Sbjct: 63  VESLLAVKAVHVTTGDYTTFVVAENGDVYSFGCG 96


>gi|361069251|gb|AEW08937.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|376339117|gb|AFB34087.1| hypothetical protein CL2350Contig1_01, partial [Pinus mugo]
 gi|383168843|gb|AFG67538.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168845|gb|AFG67539.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168847|gb|AFG67540.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168849|gb|AFG67541.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168851|gb|AFG67542.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168853|gb|AFG67543.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168855|gb|AFG67544.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168857|gb|AFG67545.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168859|gb|AFG67546.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168861|gb|AFG67547.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168863|gb|AFG67548.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168865|gb|AFG67549.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168867|gb|AFG67550.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168869|gb|AFG67551.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168871|gb|AFG67552.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168873|gb|AFG67553.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
 gi|383168875|gb|AFG67554.1| Pinus taeda anonymous locus CL2350Contig1_01 genomic sequence
          Length = 96

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 90/96 (93%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           TDEK+PR IEQF+ L L+PVV+AAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECE+VP
Sbjct: 1   TDEKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP 60

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           KVV++L  VKA+HV TGDYTTFVV+E+GDVYSFGCG
Sbjct: 61  KVVESLLRVKAVHVTTGDYTTFVVAENGDVYSFGCG 96



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 251 ESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           E  P+ ++    +K   + +A G +   VV +DG V ++G G    LGH       GN  
Sbjct: 3   EKYPRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGH-------GNEE 55

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
              + P++V SL     RV  + +T   Y    TF + E+G +Y+FG G
Sbjct: 56  CETV-PKVVESLL----RVKAVHVTTGDY---TTFVVAENGDVYSFGCG 96



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 92  PQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           P+ +E  K++ +  V  A G +  AV+ ++GRV T+ WG    LGH  E  +  P  ++ 
Sbjct: 6   PRKIEQFKHLKLEPVVIAAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECETVP-KVVE 64

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           +L  +  V +  G      +A       VYS GCG
Sbjct: 65  SLLRVKAVHVTTGDYTTFVVA---ENGDVYSFGCG 96



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAGA    ++   G+V  +G   +G   +G +  +  T P++VESL  +  V    G++ 
Sbjct: 23  AAGAWHAAVVGKDGRVCTWGWGRYGCLGHGNEECE--TVPKVVESLLRVKAVHVTTGDYT 80

Query: 113 TAVLSREGRVYTFSWG 128
           T V++  G VY+F  G
Sbjct: 81  TFVVAENGDVYSFGCG 96


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 186/345 (53%), Gaps = 27/345 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L   RI+Q A G+G T++++D G+VY +G+   G   +G  G K V  P+LVE 
Sbjct: 25  PVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFV--PRLVEE 82

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   + Q   G++ TA ++  G +YT+  G   +LGH  E     P  L+ TL+ + V 
Sbjct: 83  LRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPF-LVETLKGMQVR 141

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVV 216
           Q+A G  + + L        VY+ G    G  GHG     ++ P  +E+ +  N+  V +
Sbjct: 142 QVACGSRHTVVLLENKD---VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNI--VQI 196

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +A  +H A + + G V T+G G++G LGH +E  + V + V+AL   +   VA G + T 
Sbjct: 197 SACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTA 256

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V+E G+VY++G GE   LGH       G++  N   P  V SL  V + VVQI+     
Sbjct: 257 AVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVPTRVESL--VEKLVVQITCG--- 303

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            W +HT ALT++G++Y +G GD G+LG    N+ T+   P+ VD+
Sbjct: 304 -W-SHTVALTDTGEVYTWGNGDHGKLGH---NDTTKVTLPKLVDV 343



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M VYS G G  G+LG G  +D+  P  I+   L   + V +A G+ H  V+  +G V TW
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPIDA--LAERRIVQIACGSGHTVVLTDEGEVYTW 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G  G LGHG+   + VP++V+ L       V  G Y T  V+  GD+Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH     G    H+   TP LV +LK +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNETGHS---TPFLVETLKGMQVRQVACG-------SRHTVVLLENKDVYTWG 163

Query: 356 AGDKGQLG 363
             + G  G
Sbjct: 164 DKENGVSG 171


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 172/342 (50%), Gaps = 33/342 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++ Q +A    +  +  +GQV   G +S     + +  ++ +  P+LVE+LK     Q A
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGY 163
            G  FT  LSREG  YT       +LGH     D    P+   +E +    PVVQIAAG 
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGP 278

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            Y+LAL    S   VYS G G    LGHG + DE  PR+I+ F+   +  + V+AG  HA
Sbjct: 279 SYVLALTQDGS---VYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +  +GRV TWG G  G LGHG+E  +  P+V+  LN+  A+ V      TFV+ E G 
Sbjct: 336 VALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGL 395

Query: 284 VYSFGCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           +Y FG     SLG     ++D        VL P+++  LK    RV Q+S    +Y   H
Sbjct: 396 LYGFGWMGFGSLGFPDRGVSD-------KVLRPRVLECLKP--HRVSQVS--TGLY---H 441

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           T  +T+ G+++ FG  ++ QLG     + + RG  E  +I L
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLG-----HDSLRGCLEPTEIFL 478



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 92/208 (44%), Gaps = 20/208 (9%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           +QIA G  + L +    +   VYS G  L G L HGS T +       +F     Q   V
Sbjct: 114 MQIATGKYHTLLI----NNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFP-FPAQVAQV 168

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTT 275
           +A   H+A V Q G+V T G     C GH +       PK+V+AL       VA G + T
Sbjct: 169 SATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFT 228

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +S +G  Y+ G      LGH    D           P++V  LK +   VVQI+   S
Sbjct: 229 VFLSREGHAYTCGSNTHGQLGHGDTLDRP--------VPKVVEFLKTIGP-VVQIAAGPS 279

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +  ALT+ G +Y+FG+G    LG
Sbjct: 280 -----YVLALTQDGSVYSFGSGSNFCLG 302



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLV 95
           TP    +L     +Q  A   +T ++ + G +Y FG   FG   +  +G +  V  P+++
Sbjct: 365 TPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVL 424

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           E LK   V Q + G + T V+++ GR++ F     A+LGH +    +EP
Sbjct: 425 ECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEP 473


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 172/342 (50%), Gaps = 33/342 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++ Q +A    +  +  +GQV   G +S     + +  ++ +  P+LVE+LK     Q A
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGY 163
            G  FT  LSREG  YT       +LGH     D    P+   +E +    PVVQIAAG 
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTHGQLGH----GDTLDRPVPKVVEFLKTIGPVVQIAAGP 278

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            Y+LA+    S   VYS G G    LGHG + DE  PR+I+ F+   +  + V+AG  HA
Sbjct: 279 SYVLAVTQDGS---VYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +  +GRV TWG G  G LGHG+E  +  P+V+  LN+  A+ V      TFV+ E G 
Sbjct: 336 VALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGL 395

Query: 284 VYSFGCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           +Y FG     SLG     ++D        VL P+++  LK    RV Q+S    +Y   H
Sbjct: 396 LYGFGWMGFGSLGFPDRGVSD-------KVLRPRVLECLKP--HRVSQVS--TGLY---H 441

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           T  +T+ G+++ FG  ++ QLG     + + RG  E  +I L
Sbjct: 442 TIVVTQRGRIFGFGDNERAQLG-----HDSLRGCLEPTEIFL 478



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 92/208 (44%), Gaps = 20/208 (9%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           +QIA G  + L +    +   VYS G  L G L HGS T +       +F     Q   V
Sbjct: 114 MQIATGKYHTLLI----NNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFP-FPAQVAQV 168

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTT 275
           +A   H+A V Q G+V T G     C GH +       PK+V+AL       VA G + T
Sbjct: 169 SATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFT 228

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +S +G  Y+ G      LGH    D           P++V  LK +   VVQI+   S
Sbjct: 229 VFLSREGHAYTCGSNTHGQLGHGDTLDRP--------VPKVVEFLKTIGP-VVQIAAGPS 279

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +  A+T+ G +Y+FG+G    LG
Sbjct: 280 -----YVLAVTQDGSVYSFGSGSNFCLG 302



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLV 95
           TP    +L     +Q  A   +T ++ + G +Y FG   FG   +  +G +  V  P+++
Sbjct: 365 TPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVL 424

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           E LK   V Q + G + T V+++ GR++ F     A+LGH +    +EP
Sbjct: 425 ECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEP 473


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 166/317 (52%), Gaps = 20/317 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQAA 107
           ++Q +A       +  +G+V+  G +S      G + T + +  P+LVE+LK +   Q +
Sbjct: 165 VVQVSASHNHAAFVLQSGEVFTCGDNS--SFCCGHKDTNRPIFRPRLVEALKAVSCKQVS 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYL 166
           +G  FT  L+R+G++YT       +LGH    +   P  ++  LE I PVVQIAAG  Y+
Sbjct: 223 VGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTP-KIIELLEGIGPVVQIAAGPSYV 281

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        VYS G G    LGHG + DE  PR I+ F+  ++  V V+AG  HA  +
Sbjct: 282 LAVT---DNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G V +WG G  G LGHG+E  +++P +V  L    A+        TFV+ +DG VY 
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYG 398

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FGC     +G  ++     +    V+TP+++ SL+    RV QIS    +Y   HT  +T
Sbjct: 399 FGC-----MGFGSLGFPDRDITEKVMTPRVLDSLRA--HRVSQIS--TGLY---HTVVVT 446

Query: 347 ESGKLYAFGAGDKGQLG 363
             G+++ FG  ++ QLG
Sbjct: 447 NQGQMFGFGDNERVQLG 463



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 18/189 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           +VYS G  L G LGHG+ T +       + +  +L  VV V+A   HAA V Q G V T 
Sbjct: 130 SVYSCGSSLCGVLGHGAETTQ--CVAFTRIRFPSLANVVQVSASHNHAAFVLQSGEVFTC 187

Query: 236 GWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           G     C GH +       P++V+AL  V    V+ G   T  ++  G +Y+ G      
Sbjct: 188 GDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQ 247

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH    D          TP+++  L+ +   VVQI+   S     +  A+T++G +Y+F
Sbjct: 248 LGHGDTLDRP--------TPKIIELLEGIGP-VVQIAAGPS-----YVLAVTDNGVVYSF 293

Query: 355 GAGDKGQLG 363
           G G    LG
Sbjct: 294 GYGSNFCLG 302



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKL 88
           G E++ T P     L+    +QA A   +T ++ D G VY FG   FG   +  +  T+ 
Sbjct: 358 GDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEK 417

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V +P++++SL+   V Q + G + T V++ +G+++ F      +LGH T    ++P  + 
Sbjct: 418 VMTPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIF 477


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 183/353 (51%), Gaps = 41/353 (11%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG       L  + ++G+  IQA AAG   ++ ++ +G VY+FG   FG   +G   ++L
Sbjct: 60  LGHGDTANQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQL 119

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P+ +E L +I  + A  G+F +  L++ G VY+F  G  + LGH    +   P    
Sbjct: 120 --EPKKIEGLSDIQAIAA--GDFHSLALTKSGDVYSFGNGT-SGLGHGNTEDQSTPK--- 171

Query: 149 GTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
             +E++  VQ IAAG  + LAL        VYS G GL G+LGHG    +  P+ IE   
Sbjct: 172 -KIESLSDVQAIAAGGNHSLALTKSGD---VYSFGFGLFGRLGHGDTDSQLEPKKIED-- 225

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L ++Q   +AAG  H+  + + G V ++GWG +G LGHG+ E +  PK ++ L+D++A  
Sbjct: 226 LSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQA-- 281

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           VA G   +  +++ G+VYSFG G +  LGH    D         LTP+ +  LK +    
Sbjct: 282 VAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD--------QLTPKKIEGLKDIQAIA 333

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
                      + H+ ALT+SG +Y+FG G  G LG     NQ E   P++++
Sbjct: 334 A---------GDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLE---PKKIE 373



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 28/209 (13%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           ++V+S G G+ GKLGHG   ++  P+ IE   L ++Q   +AAG  H+  + + G V ++
Sbjct: 47  VSVFSFGMGMYGKLGHGDTANQLAPKKIE--GLSDIQ--AIAAGTNHSLALTKSGDVYSF 102

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G+G +G LGHGN + +  PK ++ L+D++AI  A GD+ +  +++ GDVYSFG G S  L
Sbjct: 103 GFGLFGRLGHGNTDSQLEPKKIEGLSDIQAI--AAGDFHSLALTKSGDVYSFGNGTSG-L 159

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH    D          TP+ + SL  V                 H+ ALT+SG +Y+FG
Sbjct: 160 GHGNTEDQS--------TPKKIESLSDVQAIAA---------GGNHSLALTKSGDVYSFG 202

Query: 356 AGDKGQLGIELVNNQTERGNPERVDIDLS 384
            G  G+LG    ++Q E   P++++ DLS
Sbjct: 203 FGLFGRLGHGDTDSQLE---PKKIE-DLS 227


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 182/336 (54%), Gaps = 24/336 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +LQ  + +Q + G+G T++++D G+VY +G+   G   +G  G K V  P+LVE 
Sbjct: 25  PILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFV--PRLVED 82

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  V Q   G++ TA ++  G +YT+  G   +LGH  E     P  L+ +++ + V 
Sbjct: 83  LRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTP-SLVESIKGLYVR 141

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVV 216
           Q+A G  + + L        VY+ G    G  GHG  +  ++ P  + +   +N++   +
Sbjct: 142 QVACGSRHTVVLL---ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQ--I 196

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +A  +H A + ++G+V T+G G++G LGH +E  + V K + AL   +   VA G + T 
Sbjct: 197 SACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTA 256

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V+E G V+++G GE   LGH       G++  N + P  V SL  +++ ++Q++     
Sbjct: 257 AVTESGHVFTWGGGEHGQLGH-------GDK-VNQIIPTRVESL--IDKNIIQLTCG--- 303

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            W +HT ALT+ G+++ +G GD G+LG    N  TE
Sbjct: 304 -W-SHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTE 337



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 25/261 (9%)

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           VYT+  G D +LG     +   P  L+  L++   VQI+ G  + + L        VY+ 
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHP-ILVEALQDRQTVQISCGSGHTVVLT---DDGKVYTW 58

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G G  G+LGHG    +  PRL+E  +   ++ V    G++H A V   G + TWG G YG
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQV--TCGSYHTAAVTVSGELYTWGGGMYG 116

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGHGNE   S P +V+++  +    VA G   T V+ E+ DVY++G  E+   GH    
Sbjct: 117 KLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGH---- 172

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
              G+   +  +P  V+ L ++N  + QIS         HT AL+E+G+++ FG G  G+
Sbjct: 173 ---GDTSGHQYSPYCVSELVEIN--IKQISAC-----GFHTAALSENGQVFTFGEGKFGR 222

Query: 362 LGIELVNNQTERGNPERVDID 382
           LG     + +ER  P    ID
Sbjct: 223 LG-----HNSERNQPVAKCID 238



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 17/188 (9%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M VY+ G G  G+LG G  +D+ HP L+E  Q  + Q V ++ G+ H  V+  DG+V TW
Sbjct: 1   MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQ--DRQTVQISCGSGHTVVLTDDGKVYTW 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G  G LGHG+   + VP++V+ L D K   V  G Y T  V+  G++Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH     G  N H+   TP LV S+K +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNENGHS---TPSLVESIKGLYVRQVACG-------SRHTVVLLENQDVYTWG 163

Query: 356 AGDKGQLG 363
             + G  G
Sbjct: 164 DKENGVSG 171


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 165/326 (50%), Gaps = 21/326 (6%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +  +G+V+  G +S     +    T+ +  P+LVESLK I   Q A
Sbjct: 164 RVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFKPRLVESLKGIPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYL 166
            G  FT  L+R+G VYT       +LGH     D +  P    +E +  VVQIAAG  Y+
Sbjct: 223 AGLNFTVFLTRKGHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYI 278

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L++        VYS G G    LGHG + DE  PR I++F+   +  V V+AG  HA  +
Sbjct: 279 LSVT---ENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G V TWG G  G LGHG+E  ++ P+++ +L +   + V      TFV+ + G VY 
Sbjct: 336 DSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYG 395

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     S+G  ++          VL P+++ +L+     V QIS    +Y   HT  +T
Sbjct: 396 FG-----SMGFGSLGFLDRRVSGKVLKPRILDTLR--THHVSQIS--TGLY---HTVVIT 443

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
             G+++ FG  ++ QLG +++ +  E
Sbjct: 444 SRGQIFGFGDNERAQLGHDILRSCLE 469



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 13/267 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+GI   Q AAG   T+ ++  G VY  G ++ G+  +G   T+   +P+++E 
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHG--DTQDRPTPKMIEV 264

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPV 156
           L +  VVQ A G  +   ++  G VY+F  G +  LGH  + ++++P  +     + I +
Sbjct: 265 LSS--VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHI 322

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V+++AG  + +AL    S   VY+ G G  G LGHG   ++  P L+    L N   V V
Sbjct: 323 VRVSAGDEHAVAL---DSNGYVYTWGKGYCGALGHGDEIEKTTPELLT--SLKNQLVVQV 377

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDY 273
            A      V+   G V  +G   +G LG  +         P+++  L       ++TG Y
Sbjct: 378 CARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLY 437

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAI 300
            T V++  G ++ FG  E A LGH+ +
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDIL 464



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 31/212 (14%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 213
           +QI  G  + L +    S  +VYS G GL G LG GS T +        F  ++  P   
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDFPPLAR 164

Query: 214 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 271
            V V+A   HAA V Q G V T G     C GH +       P++V++L  +    VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAG 224

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G VY+ G      LGH    D          TP+++    +V   VVQI+
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRP--------TPKMI----EVLSSVVQIA 272

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              S     +  ++TE+G +Y+FG+G    LG
Sbjct: 273 AGPS-----YILSVTENGTVYSFGSGANFCLG 299



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY---GVQGTKLVTSPQ 93
           TP    SL+   ++Q  A   +T ++ D+G VY FG   FG   +    V G   V  P+
Sbjct: 362 TPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGK--VLKPR 419

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           ++++L+   V Q + G + T V++  G+++ F     A+LGH    + +EP
Sbjct: 420 ILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEP 470


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 172/339 (50%), Gaps = 27/339 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++ Q +A    +  +  +G+V   G +S     + +  ++ +  P+LVE LK     Q A
Sbjct: 164 QVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGH-LDTSRPIFRPKLVEVLKGTPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYL 166
            G  FT  LSREG  YT       +LGH    +   P  ++  L+NI PVVQIAAG  Y+
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAP-KVVEFLKNIGPVVQIAAGPSYV 281

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+    S   VYS G G    LGHG + DE  PR+I+ F+   +  + V+AG  HA  +
Sbjct: 282 LAVTQDGS---VYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +GRV TWG G  G LGHG+E  +  P+V+  L +  A+ V      TFV+ E G +Y 
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYG 398

Query: 287 FGCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           FG     SLG     ++D        VL P+++  LK    RV Q+S    +Y   HT  
Sbjct: 399 FGWMGFGSLGFPDRGVSD-------KVLRPRVLECLKP--HRVSQVS--TGLY---HTIV 444

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           +T+ G+++ FG  ++ QLG     + + RG  E  +I L
Sbjct: 445 VTQGGRIFGFGDNERAQLG-----HNSLRGCLEPTEIFL 478



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           +QIA G  + L +    +   VYS G  L G L HG  T +       +F     Q   V
Sbjct: 114 MQIATGKYHTLLI----NNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFP-FPAQVAQV 168

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTT 275
           +A   H+A V Q G V T G     C GH +       PK+V+ L       VA G + T
Sbjct: 169 SATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFT 228

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +S +G  Y+ G      LGH    D    R A    P++V  LK +   VVQI+   S
Sbjct: 229 VFLSREGHAYTCGSNTHGQLGHGDTMD----RPA----PKVVEFLKNIGP-VVQIAAGPS 279

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +  A+T+ G +Y+FG+G    LG
Sbjct: 280 -----YVLAVTQDGSVYSFGSGSNFCLG 302



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLV 95
           TP    +L+    +Q  A   +T ++ + G +Y FG   FG   +  +G +  V  P+++
Sbjct: 365 TPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVL 424

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           E LK   V Q + G + T V+++ GR++ F     A+LGH++    +EP
Sbjct: 425 ECLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEP 473


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 20/321 (6%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           I + Q +A       ++ +GQV+  G +S     +     ++   P+LVE+L  I   Q 
Sbjct: 163 IYVEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIF-RPRLVEALNGIPCKQV 221

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           ++G+ F+  L+R+G VYT       +LGH        P  +   +E   V+QIAAG  Y+
Sbjct: 222 SVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYV 281

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+    +   VYS G G    LGHG + +E  PR+++ F+L N+  V V+AG  HA  +
Sbjct: 282 LAVV---NDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G V TWG G  G LGHG+E  +++P+ + +L +  A+ V      TFV+ + G VY 
Sbjct: 339 DSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYG 398

Query: 287 FGCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           FG     SLG     ++D        VL P+ + SL+    RV QIS    +Y   HT  
Sbjct: 399 FGWMGFGSLGFPDRGVSD-------KVLRPRSLDSLRV--HRVSQIS--TGLY---HTVV 444

Query: 345 LTESGKLYAFGAGDKGQLGIE 365
           +TE GK++ FG  ++ QLG E
Sbjct: 445 VTEKGKIFGFGDNERAQLGHE 465



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L GI   Q + G   ++ ++  G VY  G +++G+  +G   T    +P++V+ 
Sbjct: 207 PRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHG--NTLEGPTPKIVQR 264

Query: 98  LKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
           L  I  V+Q A G  +   +  +GRVY+F  G++  LGH  + N+ +P  L    L+NI 
Sbjct: 265 LVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIH 324

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV ++AG  + +AL    S   VY+ G G  G LGHG   D+  P+ +    L N   V 
Sbjct: 325 VVSVSAGDEHAVAL---DSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNS--LKNHLAVQ 379

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+   G V  +GW  +G LG    G  +    P+ + +L   +   ++TG 
Sbjct: 380 VCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGL 439

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T VV+E G ++ FG  E A LGH ++
Sbjct: 440 YHTVVVTEKGKIFGFGDNERAQLGHESL 467



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKL 88
           G E++ T P    SL+    +Q  A   +T ++ D G VY FG   FG   +  +G +  
Sbjct: 358 GDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDK 417

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-----EPNDVE 143
           V  P+ ++SL+   V Q + G + T V++ +G+++ F     A+LGH +     EP ++ 
Sbjct: 418 VLRPRSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEIF 477

Query: 144 PHPL 147
            H L
Sbjct: 478 IHDL 481


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 164/326 (50%), Gaps = 21/326 (6%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +  +G+V+  G +S     +    T+ +  P+LVESLK I   Q A
Sbjct: 164 RVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYL 166
            G  FT  L+R+G VYT       +LGH     D +  P    +E +  VVQIAAG  Y+
Sbjct: 223 AGLNFTVFLTRQGHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYI 278

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L++        VYS G G    LGHG + DE  PR I++F+   +  V V+AG  HA  +
Sbjct: 279 LSVT---ENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G V TWG G  G LGHG+E  ++ P+++ +L +  A+ V      TFV+   G VY 
Sbjct: 336 DSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYG 395

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     S+G  ++          VL P+++ +L+     V QIS    +Y   HT  +T
Sbjct: 396 FG-----SMGFGSLGFLDRRVSDKVLKPRILDTLRA--HHVSQIS--TGLY---HTVVIT 443

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
             G+++ FG  ++ QLG + + +  E
Sbjct: 444 SRGQIFGFGDNERAQLGHDTLRSCLE 469



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 13/267 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+GI   Q AAG   T+ ++  G VY  G ++ G+  +G   T+   +P+++E 
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHG--DTQDRPTPKMIEV 264

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPV 156
           L +  VVQ A G  +   ++  G VY+F  G +  LGH  + ++++P P+     + I +
Sbjct: 265 LSS--VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHI 322

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V+++AG  + +AL    S   VY+ G G  G LGHG   ++  P L+    L N   V V
Sbjct: 323 VRVSAGDEHAVAL---DSNGFVYTWGKGYCGALGHGDEIEKTTPELLT--SLKNQLAVQV 377

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDY 273
            A      V+   G V  +G   +G LG  +         P+++  L       ++TG Y
Sbjct: 378 CARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLY 437

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAI 300
            T V++  G ++ FG  E A LGH+ +
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDTL 464



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 31/212 (14%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 213
           +QI  G  + L +    S  +VYS G GL G LG GS T +        F  ++  P   
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDSPPLPR 164

Query: 214 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 271
            V V+A   HAA V Q G V T G     C GH +       P++V++L  +    VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G VY+ G      LGH    D          TP+++    +V   VVQI+
Sbjct: 225 LNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRP--------TPKMI----EVLSSVVQIA 272

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              S     +  ++TE+G +Y+FG+G    LG
Sbjct: 273 AGPS-----YILSVTENGTVYSFGSGANFCLG 299



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLV 95
           TP    SL+    +Q  A   +T ++ ++G VY FG   FG   +   + +  V  P+++
Sbjct: 362 TPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRIL 421

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           ++L+   V Q + G + T V++  G+++ F     A+LGH T  + +EP
Sbjct: 422 DTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEP 470



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E+   P+     +GI I++ +AG    + +   G VY +GK   G   +G +  K  T+P
Sbjct: 306 ELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEK--TTP 363

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLG 149
           +L+ SLKN   VQ       T VL   G VY F    +G+   L        ++P  +L 
Sbjct: 364 ELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPR-ILD 422

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           TL    V QI+ G  + + +    S   ++  G     +LGH
Sbjct: 423 TLRAHHVSQISTGLYHTVVIT---SRGQIFGFGDNERAQLGH 461


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 164/326 (50%), Gaps = 21/326 (6%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +  +G+V+  G +S     +    T+ +  P+LVESLK I   Q A
Sbjct: 164 RVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHR-DTTRPIFRPRLVESLKGIPCKQVA 222

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCYL 166
            G  FT  L+R+G VYT       +LGH     D +  P    +E +  VVQIAAG  Y+
Sbjct: 223 AGLNFTVFLTRKGHVYTCGTNTHGQLGH----GDTQDRPTPKMIEVLSSVVQIAAGPSYI 278

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L++        VYS G G    LGHG + DE  PR I++F+   +  V V+AG  HA  +
Sbjct: 279 LSVT---ENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G V TWG G  G LGHG+E  ++ P+++ +L +   + V      TFV+ + G VY 
Sbjct: 336 DSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYG 395

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     S+G  ++          VL P+++ +L+     V QIS    +Y   HT  +T
Sbjct: 396 FG-----SMGFGSLGFLDRRVSDKVLKPRILDTLR--THHVSQIS--TGLY---HTVVIT 443

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
             G+++ FG  ++ QLG + + +  E
Sbjct: 444 SRGQIFGFGDNERAQLGHDTLRSCLE 469



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 13/267 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+GI   Q AAG   T+ ++  G VY  G ++ G+  +G   T+   +P+++E 
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHG--DTQDRPTPKMIEV 264

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPV 156
           L +  VVQ A G  +   ++  G VY+F  G +  LGH  + ++++P  +     + I +
Sbjct: 265 LSS--VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHI 322

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V+++AG  + +AL    S   VY+ G G  G LGHG   ++  P L+    L N   V V
Sbjct: 323 VRVSAGDEHAVAL---DSNGYVYTWGKGYCGALGHGDEIEKTTPELLT--SLKNQLVVQV 377

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDY 273
            A      V+   G V  +G   +G LG  +         P+++  L       ++TG Y
Sbjct: 378 CARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLY 437

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAI 300
            T V++  G ++ FG  E A LGH+ +
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDTL 464



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 31/212 (14%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 213
           +QI  G  + L +    S  +VYS G GL G LG GS T +        F  ++  P   
Sbjct: 114 MQITTGKYHTLLI----SNSSVYSCGSGLCGVLGQGSETTQ-----CVAFTRIDFPPLAR 164

Query: 214 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 271
            V V+A   HAA V Q G V T G     C GH +       P++V++L  +    VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G VY+ G      LGH    D          TP+++    +V   VVQI+
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRP--------TPKMI----EVLSSVVQIA 272

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              S     +  ++TE+G +Y+FG+G    LG
Sbjct: 273 AGPS-----YILSVTENGTVYSFGSGANFCLG 299



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLV 95
           TP    SL+   ++Q  A   +T ++ D+G VY FG   FG   +   + +  V  P+++
Sbjct: 362 TPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRIL 421

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           ++L+   V Q + G + T V++  G+++ F     A+LGH T  + +EP
Sbjct: 422 DTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEP 470


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 27/345 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L   RI+Q A G+G T+++++ G+VY +G+   G   +G  G K V  P+LVE 
Sbjct: 25  PVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFV--PRLVEE 82

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   + Q   G++ TA ++  G +YT+  G   +LGH  E     P+ L+ TL+++ V 
Sbjct: 83  LRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPY-LVETLKSMQVR 141

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 216
           Q+A G  + + L        VY+ G    G  GHG    E H  L    + L  + +V +
Sbjct: 142 QVACGSRHTVVLLENKD---VYTWGDKENGVSGHGD--TEGHQYLPCPVEELRGKSIVQI 196

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +A  +H A + + G V T+G G++G LGH +E  + V + V AL   +   VA G + T 
Sbjct: 197 SACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTA 256

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V+E G+VY++G GE   LGH       G++  N   P  V SL  + + V+QI+     
Sbjct: 257 AVTETGEVYTWGGGEHGQLGH-------GDK-VNKTVPTRVESL--LEKLVLQITCG--- 303

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            W +HT  LT++G++Y +G GD G+LG    N+  +   P+ VD+
Sbjct: 304 -W-SHTVTLTDTGEVYTWGNGDHGKLGH---NDTAKVTLPKPVDV 343



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 27/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VY++G+   G+   G+  T     P  +++L    +VQ A G+  T VL+ EG VYT+  
Sbjct: 3   VYSWGRGEDGQ--LGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
           G+D RLGH        P  L+  L    + Q+  G  +  A+        +Y+ G G+ G
Sbjct: 61  GDDGRLGHGDNGWKFVPR-LVEELRGKNIRQVTCGSYHTAAVTVSGD---LYTWGGGMYG 116

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           KLGHG+ T    P L+E  +  ++Q   VA G+ H  V+ ++  V TWG    G  GHG+
Sbjct: 117 KLGHGNETGHSTPYLVETLK--SMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD 174

Query: 248 EE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
            E  + +P  V+ L     + ++   + T  +SE G+V++FG G+   LGHN+  +    
Sbjct: 175 TEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVA 234

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
           R  + L            +RV Q++         HT A+TE+G++Y +G G+ GQLG   
Sbjct: 235 RFVDAL----------AGKRVKQVACG-----GFHTAAVTETGEVYTWGGGEHGQLGH-- 277

Query: 367 VNNQTERGNPERVD 380
             ++  +  P RV+
Sbjct: 278 -GDKVNKTVPTRVE 290



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 17/188 (9%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M VYS G G  G+LG G  +D+  P  I+   L   + V +A G+ H  V+ ++G V TW
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPID--ALAERRIVQIACGSGHTVVLTEEGEVYTW 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G  G LGHG+   + VP++V+ L       V  G Y T  V+  GD+Y++G G    L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH     G    H+   TP LV +LK +  R V          + HT  L E+  +Y +G
Sbjct: 119 GH-----GNETGHS---TPYLVETLKSMQVRQVACG-------SRHTVVLLENKDVYTWG 163

Query: 356 AGDKGQLG 363
             + G  G
Sbjct: 164 DKENGVSG 171


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 174/340 (51%), Gaps = 29/340 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNIFVVQA 106
           R++Q +A       I ++G+V+  G +S      G Q T + +  P+ VE+LK +   Q 
Sbjct: 164 RVVQVSASHNHAAYILESGEVFTCGDNS--SFCCGHQDTSRPIFRPRFVEALKGVPCKQV 221

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCY 165
           A G  FT  L+R G VY+       +LGH    +   P  ++ + E I  V QIAAG  Y
Sbjct: 222 AAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTP-KIIESFEGIGSVAQIAAGPSY 280

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
           +LA+    SG+ VYS G G    LGHG + +E HPR I+ F+  NL  V V+AG  H   
Sbjct: 281 VLAVT--DSGV-VYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVA 337

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           +   G V TWG G  G LGHG+E  +++P+ + +L    A+ V      TFV+ + G V+
Sbjct: 338 LDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVF 397

Query: 286 SFGCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            FG     SLG     ++D        V+ P+++ SL+    RV QIS    +Y   HT 
Sbjct: 398 GFGWMGFGSLGFPDRGVSD-------KVMRPRILDSLRA--HRVSQIS--TGLY---HTV 443

Query: 344 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           A+T  G+++ FG  ++ QLG     + T RG  E  +I L
Sbjct: 444 AVTSQGQVFGFGDNERAQLG-----HDTLRGCLEPTEIFL 478



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P +  +L+G+   Q AAG   T+ ++  G VY+ G ++ G+  +G   T    +P+++ES
Sbjct: 207 PRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHG--DTLDRPTPKIIES 264

Query: 98  LKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            + I  V Q A G  +   ++  G VY+F  G++  LGH  + N+  P  +     +N+ 
Sbjct: 265 FEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLH 324

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  +++AL    SG  VY+ G G  G LGHG   D+  P  +    L +   V 
Sbjct: 325 VVRVSAGDEHVVAL--DSSGF-VYTWGKGYCGALGHGDEIDKTLPEPLN--SLKSHLAVQ 379

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+   G V  +GW  +G LG    G  +    P+++ +L   +   ++TG 
Sbjct: 380 VCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGL 439

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V+  G V+ FG  E A LGH+ +
Sbjct: 440 YHTVAVTSQGQVFGFGDNERAQLGHDTL 467



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 22/209 (10%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           +QI  G  + L +    S  +VYS G  L G LGHG  T +       +    +L  VV 
Sbjct: 114 MQITTGRYHTLLI----SNSSVYSCGSSLCGVLGHGPETTQCVS--FSRITFPSLARVVQ 167

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYT 274
           V+A   HAA + + G V T G     C GH +       P+ V+AL  V    VA G   
Sbjct: 168 VSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNF 227

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T  ++  G VYS G      LGH    D          TP+++ S + +   V QI+   
Sbjct: 228 TVFLTRTGHVYSCGTNTHGQLGHGDTLDRP--------TPKIIESFEGIGS-VAQIAAGP 278

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S     +  A+T+SG +Y+FG+G    LG
Sbjct: 279 S-----YVLAVTDSGVVYSFGSGSNFCLG 302


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 164/327 (50%), Gaps = 24/327 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P Y  +L+G+ + Q A G+G T++++  G+V+ +G+   G   +G  G K V  P++ +S
Sbjct: 24  PTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYV--PRMTQS 81

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L    V+Q   G++ TA ++  G +YT+  G   +LGH  E     P  +   L    V 
Sbjct: 82  LAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVE-ALVGATVA 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVV 216
           QIA G  +    A   +  A+Y+ G    G  GHG     ++ PRL+E      +  +  
Sbjct: 141 QIACGSRHT---AIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQI-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +A  +H A+V   G + TWG G++G LGH +E     P +V  +   K   V+ G + T 
Sbjct: 196 SACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           VVSEDG +Y+FG GE   LGH        N   N +TP  V +L  +   V QI+   S 
Sbjct: 256 VVSEDGRLYTFGGGEHGQLGH--------NDRVNKMTPTFVEALDGM--FVSQITCGWS- 304

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
               H+ ALT  G +Y +G GD G+LG
Sbjct: 305 ----HSVALTVKGLVYTWGNGDHGKLG 327



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 17/187 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AV++ G G  G+LG G  +D+  P  ++  + + +Q   +A G+ H  V+  DG V TWG
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ--IACGSGHTVVLTTDGEVFTWG 58

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            G  G LGHG+   + VP++ Q+L     + V  G Y T  V+ +GD+Y++G G    LG
Sbjct: 59  RGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
           H   A      HA   TP+ V +L  V   V QI+  +      HT  +T SG LY +G 
Sbjct: 119 HGDEAG-----HA---TPKRVEAL--VGATVAQIACGSR-----HTAIVTASGALYTWGD 163

Query: 357 GDKGQLG 363
            + G  G
Sbjct: 164 KENGVAG 170



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 9/223 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV 95
           TP    +L G  + Q A G+  T +++ +G +Y +G    G A +G  +G + +  P+L+
Sbjct: 127 TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYL--PRLL 184

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ES+    V Q +   F TA+++  G ++T+  G   RLGH +E N   P  ++  +    
Sbjct: 185 ESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP-TIVDYMVGKK 243

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             Q++   C     A       +Y+ G G  G+LGH  R ++  P  +E    + +  + 
Sbjct: 244 PRQVS---CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQIT 300

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
              G  H+  +   G V TWG G +G LGHGN    +VP+ V+
Sbjct: 301 --CGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 18/149 (12%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V TWG G  G LG G+   +  P  V AL  V    +A G   T V++ DG+V+++G G+
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH          +     P++  SL    + V+Q++  +      HT A+T +G L
Sbjct: 62  DGRLGH--------GDNGWKYVPRMTQSL--AGQIVLQVTCGSY-----HTAAVTGNGDL 106

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVD 380
           Y +G G  G+LG     ++     P+RV+
Sbjct: 107 YTWGGGMYGKLGH---GDEAGHATPKRVE 132


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 165/322 (51%), Gaps = 18/322 (5%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +++ G+V+  G +S     +G  G + +  P  +++LK I   Q A
Sbjct: 156 RVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVG-RTIFRPTEIKALKGISCKQVA 214

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYL 166
            G  FT +L+ +G+VYT       +LGH    +   P  ++   E + PVVQ+AAG  Y 
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPK-IVELFEGLAPVVQVAAGASYT 273

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            A+        VYS G      LGHG + DE  PR I+ F+  N+  V V+AG  HA  +
Sbjct: 274 FAVT---DDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV++++G V++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     SLG      G  ++   V+ P+++ SL+  +  V QIS    +Y   HT A+T
Sbjct: 391 FGWMGFGSLGFP--DRGSSDK---VMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVT 438

Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
             G ++ FG  ++ QLG E + 
Sbjct: 439 NRGIVFGFGDNERAQLGQEYIR 460



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 134/268 (50%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+GI   Q A G   T++++  GQVY  G ++ G+  +G   T    +P++VE 
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG--DTIDRATPKIVEL 256

Query: 98  LKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
            + +  VVQ A G  +T  ++ +G VY+F    +  LGH  + +++ P  +      NI 
Sbjct: 257 FEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIH 316

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  + +AL    +   VY+ G G  G LGHG   D+  P LI   +  +   V 
Sbjct: 317 VVRVSAGDEHAVAL---DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK--SQVAVQ 371

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+  +G V  +GW  +G LG    G+ +    P+V+ +L D     ++TG 
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGL 431

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V+  G V+ FG  E A LG   I
Sbjct: 432 YHTVAVTNRGIVFGFGDNERAQLGQEYI 459



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 24/210 (11%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           +Q+A G  + L +       +VYS G  L G LGHG   D        +    +L  VV 
Sbjct: 106 MQVATGRYHTLLV----HDSSVYSCGSSLCGVLGHGP--DTTQCAAFSRVPFPSLSRVVN 159

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 273
           ++A   HAA V + G V T G     C GHG E   ++  P  ++AL  +    VATG  
Sbjct: 160 ISASHNHAAFVTELGEVFTCGDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLS 218

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T +++ DG VY+ G      LGH    D          TP++V   + +   VVQ++  
Sbjct: 219 FTVILTTDGQVYTCGSNTHGQLGHGDTIDRA--------TPKIVELFEGLAP-VVQVAAG 269

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            S     +TFA+T+ G +Y+FG+     LG
Sbjct: 270 AS-----YTFAVTDDGTVYSFGSCTNFCLG 294



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P    SL+    +Q  A   +T +++D G V+AFG   FG   +  +G+   V  P+++
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
           +SL++ +V Q + G + T  ++  G V+ F     A+LG 
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQ 456


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 18/322 (5%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +++ G+V+  G +S     +G  G + +  P  +++LK I   Q A
Sbjct: 156 RVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVG-RTIFRPTEIKALKGISCKQVA 214

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYL 166
            G  FT +L+ +G+VYT       +LGH    +   P  ++   E + PVVQ+AAG  Y 
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYT 273

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            A+        VYS G      LGHG + DE  PR I+ F+  N+  V V+AG  HA  +
Sbjct: 274 FAVT---DDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV++++G V++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     SLG              V+ P+++ SL+  +  V QIS    +Y   HT A+T
Sbjct: 391 FGWMGFGSLGFPDRGSSD-----KVMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVT 438

Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
             G ++ FG  ++ QLG E + 
Sbjct: 439 NRGIVFGFGDNERAQLGQEYIR 460



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 141/296 (47%), Gaps = 20/296 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+GI   Q A G   T++++  GQVY  G ++ G+  +G   T    +P++VE 
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG--DTIDRATPKIVEL 256

Query: 98  LKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
            + +  VVQ A G  +T  ++ +G VY+F    +  LGH  + +++ P  +      NI 
Sbjct: 257 FEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIH 316

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  + +AL        VY+ G G  G LGHG   D+  P LI    L +   V 
Sbjct: 317 VVRVSAGDEHAVALDALG---YVYTWGRGYCGALGHGDENDKTSPELIS--SLKSQVAVQ 371

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+  +G V  +GW  +G LG    G+ +    P+V+ +L D     ++TG 
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGL 431

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           Y T  V+  G V+ FG  E A LG   I           L P  +   K + E V+
Sbjct: 432 YHTVAVTNRGIVFGFGDNERAQLGQEYI--------RGCLKPTEIMFQKSMEEIVI 479



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 20/190 (10%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           +VYS G  L G LGHG   D        +    +L  VV ++A   HAA V + G V T 
Sbjct: 122 SVYSCGSSLCGVLGHGP--DTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVFTC 179

Query: 236 GWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           G     C GHG E   ++  P  ++AL  +    VATG   T +++ DG VY+ G     
Sbjct: 180 GDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHG 238

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH    D          TP++V   + +   VVQ++   S     +TFA+T+ G +Y+
Sbjct: 239 QLGHGDTIDRA--------TPKIVELFEGLAP-VVQVAAGAS-----YTFAVTDDGTVYS 284

Query: 354 FGAGDKGQLG 363
           FG+     LG
Sbjct: 285 FGSCTNFCLG 294



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P    SL+    +Q  A   +T +++D G V+AFG   FG   +  +G+   V  P+++
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           +SL++ +V Q + G + T  ++  G V+ F     A+LG       ++P  ++
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIM 469


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 162/322 (50%), Gaps = 18/322 (5%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +++ G+V+  G +S     +G  G + +  P  +++LK I   Q A
Sbjct: 156 RVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVG-RTIFRPTEIKALKGISCKQVA 214

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYL 166
            G  FT +L+ +G+VYT       +LGH    +   P  ++   E + PVVQ+AAG  Y 
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYT 273

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            A+        VYS G      LGHG + DE  PR I+ F+  N+  V V+AG  HA  +
Sbjct: 274 FAVT---DDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV++++G V++
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFA 390

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG     SLG              V+ P+++ SL+  +  V QIS    +Y   HT A+T
Sbjct: 391 FGWMGFGSLGFPDRGSSD-----KVMRPRVLDSLR--DHYVSQIS--TGLY---HTVAVT 438

Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
             G ++ FG  ++ QLG E + 
Sbjct: 439 NRGIVFGFGDNERAQLGQEYIR 460



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 20/296 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+GI   Q A G   T++++  GQVY  G ++ G+  +G   T    +P++VE 
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHG--DTIDRATPKIVEL 256

Query: 98  LKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
            + +  VVQ A G  +T  ++ +G VY+F    +  LGH  + +++ P  +      NI 
Sbjct: 257 FEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIH 316

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  + +AL    +   VY+ G G  G LGHG   D+  P LI    L +   V 
Sbjct: 317 VVRVSAGDEHAVAL---DALGYVYTWGRGYCGALGHGDENDKTSPELIS--SLKSQVAVQ 371

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+  +G V  +GW  +G LG    G+ +    P+V+ +L D     ++TG 
Sbjct: 372 VCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGL 431

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           Y T  V+  G V+ FG  E A LG   I           L P  +   K + E V+
Sbjct: 432 YHTVAVTNRGIVFGFGDNERAQLGQEYI--------RGCLKPTEIMFQKSMEEIVI 479



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 20/190 (10%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           +VYS G  L G LGHG   D        +    +L  VV ++A   HAA V + G V T 
Sbjct: 122 SVYSCGSSLCGVLGHGP--DTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVFTC 179

Query: 236 GWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           G     C GHG E   ++  P  ++AL  +    VATG   T +++ DG VY+ G     
Sbjct: 180 GDNSSLCCGHG-EVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHG 238

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH    D          TP++V   + +   VVQ++   S     +TFA+T+ G +Y+
Sbjct: 239 QLGHGDTIDRA--------TPKIVELFEGLAP-VVQVAAGAS-----YTFAVTDDGTVYS 284

Query: 354 FGAGDKGQLG 363
           FG+     LG
Sbjct: 285 FGSCTNFCLG 294



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P    SL+    +Q  A   +T +++D G V+AFG   FG   +  +G+   V  P+++
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           +SL++ +V Q + G + T  ++  G V+ F     A+LG       ++P  ++
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIM 469


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 167/322 (51%), Gaps = 23/322 (7%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           +  +VY++G+   G+  +G + T+    P+LV +     V Q + GN  TA+L   G V+
Sbjct: 4   EGSEVYSWGQGVLGQLGHGDEKTQ--RQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVF 61

Query: 124 TFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           TF  GN  +LG       +V    L+  L+   V Q+A G+ +  AL        +Y+ G
Sbjct: 62  TFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ---LYTWG 118

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
            G  G+LGHG    +  P+L+E  Q    +   VAAG +H++V+ + G + TWG G +G 
Sbjct: 119 SGEYGRLGHGDEVRQASPKLVESLQ--GKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           LGHG+E     PK+V+ +    A  VA G + T ++++  +V+++G GE   LG   I D
Sbjct: 177 LGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLG---IGD 233

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            +  +HA    P ++T+L+ V   V+ IS         H+ ALT  G LY +G GDKGQL
Sbjct: 234 EE--KHAE---PIMITALQGVG--VIHISTG-----GFHSAALTSEGVLYTWGGGDKGQL 281

Query: 363 GIELVNNQTERGNPERVDIDLS 384
           G    N+Q      E +  D+S
Sbjct: 282 GHGDENSQNIPVVVEVISCDMS 303



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +  G  + Q + G   T ++ + G+V+ FG+ +FG+   G   T  V++P LV +
Sbjct: 30  PRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSA 89

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   V Q A G   T  L   G++YT+  G   RLGH  E     P  L+ +L+   V 
Sbjct: 90  LQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASP-KLVESLQGKEVT 148

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +AAG  +   +     G  + + G G  G+LGHG  TD K P++++  Q        VA
Sbjct: 149 FVAAGGFHSSVII---EGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHE--VA 203

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G  H  ++ Q   V TWG G +G LG G+EE  + P ++ AL  V  IH++TG + +  
Sbjct: 204 CGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAA 263

Query: 278 VSEDGDVYSFGCGESASLGH 297
           ++ +G +Y++G G+   LGH
Sbjct: 264 LTSEGVLYTWGGGDKGQLGH 283



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQG  + Q A G   T  + D GQ+Y +G   +G   +G +  +   SP+LVE
Sbjct: 83  TPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQ--ASPKLVE 140

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL+   V   A G F ++V+   G + T+  G   +LGH  E +   P  + G  + I  
Sbjct: 141 SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIA- 199

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            ++A G  + L L        V++ G G  GKLG G       P +I   Q + +  + +
Sbjct: 200 HEVACGTHHTLMLT---QSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGV--IHI 254

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + G +H+A +  +G + TWG G  G LGHG+E  +++P VV+ ++
Sbjct: 255 STGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEVIS 299


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 161/321 (50%), Gaps = 16/321 (4%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +A       +++ GQV+  G +S     +G  G + +  P  +E+LK  F  Q A
Sbjct: 155 RVVNISAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVG-RTIFRPTQIEALKGTFCKQVA 213

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G  FT +L+REG+VYT       +LGH    +   P  +     + PVVQ+AAG  Y  
Sbjct: 214 TGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTF 273

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V+S G      LGHG + +E  PR I+ F+  N+  V V+AG  HA  + 
Sbjct: 274 AVT---DDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALD 330

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV++++G V +F
Sbjct: 331 ALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAF 390

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G     SLG     D + +    V+ P ++ SL+     V QIS    +Y   HT A+T 
Sbjct: 391 GWMGFGSLG---FPDRESSD--KVMKPCVLDSLR--GHYVSQIS--TGLY---HTVAVTN 438

Query: 348 SGKLYAFGAGDKGQLGIELVN 368
            G ++ FG  ++ QLG E + 
Sbjct: 439 KGIVFGFGDNERAQLGQEYIR 459



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+G    Q A G   T++++  GQVY  G ++ G+  +G   T    +P+++E 
Sbjct: 198 PTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHG--DTIDRAAPKIIEL 255

Query: 98  LK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
            + +  VVQ A G  +T  ++ +G V++F    +  LGH  + N++ P  +      NI 
Sbjct: 256 FEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIH 315

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  + +AL    +   VY+ G G  G LGHG   D+  P LI    L     V 
Sbjct: 316 VVRVSAGDEHAVAL---DALGYVYTWGRGYCGALGHGDENDKTSPELIG--SLKGQVAVQ 370

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGD 272
           V A      V+  +G V  +GW  +G LG  + E       P V+ +L       ++TG 
Sbjct: 371 VCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGL 430

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V+  G V+ FG  E A LG   I
Sbjct: 431 YHTVAVTNKGIVFGFGDNERAQLGQEYI 458



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 69/256 (26%)

Query: 177 AVYSVGCGLGGKLGHGSRTDE-------KHPRL----------------IEQFQLLN--- 210
           +VYS G  L G LGHG  T +         P L                 E  Q+     
Sbjct: 121 SVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETGQVFTCGD 180

Query: 211 ---------------LQPVVVAA-----------GAWHAAVVGQDGRVCTWGWGRYGCLG 244
                           +P  + A           G     ++ ++G+V T G   +G LG
Sbjct: 181 NSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLG 240

Query: 245 HGNEECESVPKVVQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           HG+    + PK+++        + VA G   TF V++DG V+SFG   +  LGH      
Sbjct: 241 HGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGH------ 294

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            G++H N L P+ + S K+ N  VV++S  +      H  AL   G +Y +G G  G LG
Sbjct: 295 -GDQH-NELLPRAIQSFKRRNIHVVRVSAGDE-----HAVALDALGYVYTWGRGYCGALG 347

Query: 364 IELVNNQTERGNPERV 379
               N++T   +PE +
Sbjct: 348 HGDENDKT---SPELI 360



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLV 95
           +P    SL+G   +Q  A   +T +++D G V AFG   FG   +   + +  V  P ++
Sbjct: 356 SPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVL 415

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           +SL+  +V Q + G + T  ++ +G V+ F     A+LG       ++P  ++    ++ 
Sbjct: 416 DSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSME 475

Query: 156 VVQIAA 161
            + IAA
Sbjct: 476 DIAIAA 481


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 24/325 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDS---FGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           R+I  +A       ++++G+V+  G +S    G  E G    + +  P  VE+LK I   
Sbjct: 155 RVINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVG----RTIFRPMQVEALKGIPCK 210

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGY 163
           Q A G  FT +L+R+G+VYT       +LGH    +   P  L+   E    VVQIAAG 
Sbjct: 211 QVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATP-KLIELFEGPTQVVQIAAGA 269

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            Y  A+        V+S G      LGHG + DE  PR I+ F+  N+  V V+AG  HA
Sbjct: 270 SYTFAVT---DDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHA 326

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +   G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV++++G 
Sbjct: 327 VALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGS 386

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V +FG     SLG   +  G  ++   V+ P+++ SL+  +  V QIS    +Y   HT 
Sbjct: 387 VVAFGWMGFGSLGF--LDRGTSDK---VMRPRVLESLQ--DHYVSQIS--TGLY---HTV 434

Query: 344 ALTESGKLYAFGAGDKGQLGIELVN 368
           A+T  G ++ FG  ++ QLG E + 
Sbjct: 435 AVTNKGIVFGFGDNERAQLGQEYIR 459



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L+GI   Q A G   T++++  GQVY  G ++ G+  +G   T    +P+L+E 
Sbjct: 198 PMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHG--DTIDRATPKLIEL 255

Query: 98  LKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
            +    VVQ A G  +T  ++ +G V++F    +  LGH  + +++ P  +      NI 
Sbjct: 256 FEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIH 315

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+++AG  + +AL        VY+ G G  G LGHG   D+  P LI   +      V 
Sbjct: 316 VVRVSAGDEHAVALDALGH---VYTWGRGYCGALGHGDENDKTSPELIGSLK--GQVAVQ 370

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+  +G V  +GW  +G LG    G  +    P+V+++L D     ++TG 
Sbjct: 371 VCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGL 430

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V+  G V+ FG  E A LG   I
Sbjct: 431 YHTVAVTNKGIVFGFGDNERAQLGQEYI 458



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 20/183 (10%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           +VYS G  L G LGHG   D        +    +L  V+ ++A   HAA V + G V T 
Sbjct: 121 SVYSCGSSLCGVLGHGP--DTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEVFTC 178

Query: 236 GWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           G     C GHG E   ++  P  V+AL  +    VATG   T +++ DG VY+ G     
Sbjct: 179 GDNSSLCCGHG-EVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHG 237

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH    D          TP+L+  L +   +VVQI+   S     +TFA+T+ G +++
Sbjct: 238 QLGHGDTIDRA--------TPKLI-ELFEGPTQVVQIAAGAS-----YTFAVTDDGTVHS 283

Query: 354 FGA 356
           FG+
Sbjct: 284 FGS 286



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 3/123 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P    SL+G   +Q  A   +T +++D G V AFG   FG   +  +GT   V  P+++
Sbjct: 356 SPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVL 415

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL--GTLEN 153
           ESL++ +V Q + G + T  ++ +G V+ F     A+LG       ++P  ++   ++E+
Sbjct: 416 ESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIED 475

Query: 154 IPV 156
           IP+
Sbjct: 476 IPI 478


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 161/318 (50%), Gaps = 22/318 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +IQ +A       +  +G+V+  G +S     +     + +  P+LVE+LK +   Q A+
Sbjct: 165 VIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHN-DTNRPIFRPRLVEALKGVPCKQVAV 223

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 167
           G  FT  L+R+G++YT       +LGH    +   P  ++  LE +  VVQIAAG  Y+L
Sbjct: 224 GLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTP-KIIELLEGVGSVVQIAAGPSYVL 282

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        VYS G G    LGHG + DE  PR I+ F+  ++  V V+AG  HA  + 
Sbjct: 283 AVT---DNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALD 339

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V +WG G  G LGHG+E  +++P +V  L    A+ V      TFV+ + G VY F
Sbjct: 340 SSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGF 399

Query: 288 GCGESASLGH--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           G     SLG     ++D        V+ P+++ SL+     V QIS    +Y   HT  +
Sbjct: 400 GWMGFGSLGFPDRGLSD-------KVMRPRVLDSLRA--RHVSQIS--TGLY---HTVVV 445

Query: 346 TESGKLYAFGAGDKGQLG 363
           T  G+++ FG  ++ QLG
Sbjct: 446 TNQGQMFGFGDNERAQLG 463



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 151/355 (42%), Gaps = 36/355 (10%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRI-----------IQAAAGAGRTMLISDAGQVYAFG 72
           N ++ L GR         R LQ +             +Q   G   T+LI D+  VY+ G
Sbjct: 77  NAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHTLLIRDS-SVYSCG 135

Query: 73  KDSFGEAEYGVQGTKLVTSPQL-VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
               G   +G + T+ V   ++   SL   +V+Q +  +   A + + G V+T    +  
Sbjct: 136 SSLCGVLGHGAETTQCVAFTRIRFPSLA--YVIQVSASHNHAAFVLQSGEVFTCGDNSSF 193

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
             GH+     +    L+  L+ +P  Q+A G  + + L  Q     +Y+ G    G+LGH
Sbjct: 194 CCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQ---LYTCGTNTHGQLGH 250

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G   D   P++IE  + +    V +AAG  +   V  +G V ++G G   CLGHG +  E
Sbjct: 251 GDTQDRPTPKIIELLEGVG-SVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDE 309

Query: 252 SVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
             P+ +Q     D+  +HV+ GD     +   G VYS+G G   +LGH    D       
Sbjct: 310 FRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKT----- 364

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
               P LV  LK  +   VQ+           TF L + G +Y FG    G LG 
Sbjct: 365 ---LPALVNCLK--SHLAVQVCARKR-----KTFVLVDGGSVYGFGWMGFGSLGF 409



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKL 88
           G E++ T P     L+    +Q  A   +T ++ D G VY FG   FG   +  +G +  
Sbjct: 358 GDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDK 417

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P++++SL+   V Q + G + T V++ +G+++ F     A+LGH T    ++P  + 
Sbjct: 418 VMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIF 477


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 169/335 (50%), Gaps = 27/335 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  T+ +     V +FG+   G+  +G    +L+  P+++ +L +  +   A
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLL--PRIIGALNDCEISLVA 63

Query: 108 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G +  TA  +    +Y++ WG+  RLGH    +   PHP+   L+ + + QIA G  + 
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        VYS G    G+LG G   D   P  +  F+ ++++  ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G++  WGWGRYG LG G+     +P  V A+ D K   VA G   T  VS+ G +Y+
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH   AD         L P  V +L + N  + Q+S      W  HT ALT
Sbjct: 238 YGWSKYGQLGHGDYAD--------HLLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           E+GKLY +G    GQ+G   V++ T   +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 15/269 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+ I Q A G    + ++  G+VY++G++  G+   G     LV  P  + +
Sbjct: 101 PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLA 158

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIP 155
            + + V   A G   TA ++  G++Y + WG    LG     + + P   P +G   +  
Sbjct: 159 FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEK 215

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +  +A G+ + +A++   SG  +Y+ G    G+LGHG   D   P  +      N+  V 
Sbjct: 216 MCMVACGWRHTIAVS--QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV- 271

Query: 216 VAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDY 273
             +G W H   + + G++  WGW ++G +G G+ +  + P+++       + + V+ G  
Sbjct: 272 --SGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWR 329

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            T  V++  +VYS+G G S  LGH    D
Sbjct: 330 HTVAVTDKNNVYSWGRGTSGQLGHGDAVD 358



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 13/242 (5%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   + +  P    + +G+ +   AAGA  T  ++D+G++Y +G   +G    G
Sbjct: 138 QNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLG 197

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +G +++  P  V ++ +  +   A G   T  +S+ G++YT+ W    +LGH    + +
Sbjct: 198 DRGDRML--PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L    + Q++ G+ + +AL        +Y  G    G++G G   D   P+L
Sbjct: 256 LPHQV-AALAEFNITQVSGGWRHTVALT---EAGKLYGWGWNKFGQVGSGDVDDHTSPQL 311

Query: 203 IE---QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           I    Q Q +    V V+ G  H   V     V +WG G  G LGHG+    S PK +QA
Sbjct: 312 ISIPGQHQRV----VQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQA 367

Query: 260 LN 261
           L+
Sbjct: 368 LS 369


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  +R +Q   G      ++  G+VYA G  + G    G+ GT  V  P L+ES
Sbjct: 3808 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGR--LGIGGTDSVMVPTLLES 3865

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++FV + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 3866 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEE--LLGT 3923

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+LIE  Q   
Sbjct: 3924 ----EIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYK 3976

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   +P  +++L  +  I V  
Sbjct: 3977 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4036

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G +Y++G G+   LGH            +V  P+ V +L+   ++++ I
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISI 4086

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4087 A-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4114



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 150/301 (49%), Gaps = 29/301 (9%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            VY +G   KD  G    G++G+K +  P   E L  +  V  A G+    V+S+EG++Y 
Sbjct: 2792 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2846

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
               G + RLG   + N  EP P +  L    + ++A       ALA    G  V+S G G
Sbjct: 2847 CGEGTNGRLGLGDDSNVCEPKP-IPFLSQYVIKKVAVHSGGKHALALTQDG-KVFSWGEG 2904

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 2905 EDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 2962

Query: 245  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            HG+   +S PK+VQ+L   + I +A G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 2963 HGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-SD 3021

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3022 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3067

Query: 363  G 363
            G
Sbjct: 3068 G 3068



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G   +  +  P+L+ESLK+  +   
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDI 2934

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH       +P  L+ +L    V+QIA G    
Sbjct: 2935 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRVIQIACGSRDA 2993

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G+ VYS G G  GKLG G       P LI++   L +  V +  GA  +  +
Sbjct: 2994 QTMALTADGL-VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLAL 3050

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY+
Sbjct: 3051 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYA 3110

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+      +         P LV  L       V    ++SI W
Sbjct: 3111 WGDNDHGQQGNGTTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3154



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 133/297 (44%), Gaps = 43/297 (14%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           SP   +++  + + Q         +LS  G VY   +G+             E   + G 
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGS-------------ETQRVYGF 497

Query: 151 LENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            E  P+  IA+     + LAL    S   VYS G G  G+LGHG+ T    P+LIE    
Sbjct: 498 SEK-PITMIASHSDGTHYLALTQDNS---VYSWGNGECGRLGHGNMTWYDEPKLIEALVE 553

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIH 267
            N+    +A G+ ++A +  +G + TWG G YG LGHGN + +  +P +V ALN    ++
Sbjct: 554 KNI--TFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVY 611

Query: 268 VATG---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           VA G   D  T  V+  G V+S+G G    LG     DG         TP++V  L  +N
Sbjct: 612 VACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGG-CDGSK-------TPKIVDKLLDIN 663

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              V             + ALT  G++Y +G G+  +LG     N+     P+ +DI
Sbjct: 664 VAKVYCG-------QQFSAALTAYGEVYTWGKGEDYKLG---HGNEDHVRYPKIIDI 710



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            +LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+   
Sbjct: 3777 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 3833

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3834 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         LTP+L+ +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 3953 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 3999

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4000 SWGDGDYGKLG 4010



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 152/365 (41%), Gaps = 50/365 (13%)

Query: 13  PILRPDIINERNGKRNLLGREV---------NG-TPLYCRSLQGIRIIQAAAGAGRTMLI 62
           P+L P I +      N   +EV         NG +P+Y  ++  + I Q        +++
Sbjct: 417 PLLPPIIADRFQKNHNQTFQEVIAWGSVVTFNGPSPVYYDTISELGIKQLCCTERAVIIL 476

Query: 63  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
           S  G VY     S  +  YG              S K I ++ +         L+++  V
Sbjct: 477 SVNGNVYMMYYGSETQRVYGF-------------SEKPITMIASHSDGTHYLALTQDNSV 523

Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           Y++  G   RLGH       EP  L+  L    +  IA G  Y  AL+   S   +Y+ G
Sbjct: 524 YSWGNGECGRLGHGNMTWYDEPK-LIEALVEKNITFIACGSTYSAALS---SNGELYTWG 579

Query: 183 CGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV-VAAGAW---HAAVVGQDGRVCTWGW 237
            G  GKLGHG S  D   P L+     LN   VV VA G         V   G V +WG 
Sbjct: 580 RGNYGKLGHGNSDKDVMIPTLVTA---LNGHMVVYVACGGGRDPQTLCVTASGIVFSWGD 636

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G +G LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE   LGH
Sbjct: 637 GNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGH 696

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                  GN   +V  P+++  LK    + + I        + H  ALTE   +Y +G  
Sbjct: 697 -------GNED-HVRYPKIIDILKTKKIKDLYIG-------HLHVLALTEDQLVYGWGRN 741

Query: 358 DKGQL 362
           D GQ+
Sbjct: 742 DHGQI 746



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G  I+  A G   +  I+ AG +Y +GK  +G   +G    +L  +P+L+E+
Sbjct: 3914 PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEA 3971

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 3972 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLG 4030

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+++  G  + +AL    SG A+Y+ G G   +LGHG+    + PR +   Q    + + 
Sbjct: 4031 VIKVECGSQFSVALT--RSG-AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIIS 4085

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4086 IATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4145

Query: 276  FVVS 279
               S
Sbjct: 4146 LAWS 4149



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            Q   V  WG      LG        +P   + L+ +K +H+A G  T FVVS++G +Y+ 
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            G G +  LG   + D      +NV  P+ +  L Q   + V +          H  ALT+
Sbjct: 2848 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVAVHSGGK-----HALALTQ 2894

Query: 348  SGKLYAFGAGDKGQLG 363
             GK++++G G+ G+LG
Sbjct: 2895 DGKVFSWGEGEDGKLG 2910



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 5/140 (3%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3025 TPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3082

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L+   ++  A+G      ++  G+VY +   +  + G+ T   + +P  L+  L++  V
Sbjct: 3083 GLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPS-LVHELDDARV 3141

Query: 157  VQIAAGYCYLLA--LACQPS 174
             +++ G  + +A  L  QP+
Sbjct: 3142 NRVSCGSSHSIAWVLTDQPA 3161


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 167/330 (50%), Gaps = 30/330 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L+ + ++Q A G+G T+++++   V+++G+   G   +     K V  P LV +
Sbjct: 30  PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYV--PHLVSA 87

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI--- 154
           L    + Q   G++ TA +S  G ++T+  G   +LGH  E      HP    +E     
Sbjct: 88  LTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVG----HPAPCRVEAFIGR 143

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQP 213
            V QIA G  +  AL    +G  VY  G    G  G G   + ++ P+ +E  + + +  
Sbjct: 144 EVEQIACGSRHTAALL---AGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQ 200

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +AA  +H A + QDG + +WG G++G LG GNE+ +  P  V+ L  V+   VA G +
Sbjct: 201 --IAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGF 258

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  V+EDGDV +FG GE   LGH       G++  N   P LV +L+     +VQ++  
Sbjct: 259 HSACVTEDGDVLTFGGGEHGQLGH-------GDK-TNRTVPCLVKALEGAG--IVQVTCG 308

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            S     HT  L+E GK++ FG GD G+LG
Sbjct: 309 WS-----HTVTLSEDGKVFTFGNGDHGKLG 333



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 17/187 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           +YS G G  G+ G+GS  D++ P  +E  + L +  V +A G+ H  V+ +D  V +WG 
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTV--VQIACGSGHTVVLTEDKDVWSWGR 65

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G  G LGH +   + VP +V AL       V  G Y T  +S+ G ++++G G    LGH
Sbjct: 66  GDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                  GN    V  P        +   V QI+  +      HT AL   G++Y +G  
Sbjct: 126 -------GNE---VGHPAPCRVEAFIGREVEQIACGSR-----HTAALLAGGEVYCWGDR 170

Query: 358 DKGQLGI 364
           + G  GI
Sbjct: 171 ENGVCGI 177



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQG+R+ Q A G   +  +++ G V  FG    G+  +G +  + V  P LV+
Sbjct: 238 TPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTV--PCLVK 295

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+   +VQ   G   T  LS +G+V+TF  G+  +LGH        P  L+ +L N+ V
Sbjct: 296 ALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALP-KLVESLANMKV 354

Query: 157 VQIAAGYCYLLALACQPSGMAVYS 180
            ++A+   + +AL       AV S
Sbjct: 355 AKVASYNEHTVALCHAEQEQAVMS 378



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            D  + +WG G  G  G+G+   + +P  V+ L  +  + +A G   T V++ED DV+S+
Sbjct: 4   HDSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSW 63

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G+   LGH        + H   + P LV++L    + + Q++  +      HT A+++
Sbjct: 64  GRGDDGRLGH-------ADNHWKYV-PHLVSAL--TGKSIKQVTCGSY-----HTAAISD 108

Query: 348 SGKLYAFGAGDKGQLG 363
           +G L+ +G G  G+LG
Sbjct: 109 TGALWTWGGGMYGKLG 124


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  +R +Q   G    + ++  G+VYA G  + G    G+ GT  V  P L+ES
Sbjct: 4316 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR--LGIGGTDSVMVPTLLES 4373

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++FV + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 4374 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE--LLGT 4431

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+L+E  Q   
Sbjct: 4432 ----EIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4484

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   +P  +++L  +  I V  
Sbjct: 4485 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4544

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G +Y++G G+   LGH            +V  P+ V +L+   ++++ I
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISI 4594

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4595 A-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4622



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            VY +G   KD  G    G++G+K +  P   E L  +  +  A G+    V+S+EG++Y 
Sbjct: 3261 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3315

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
               G + RLG   + N  EP  L+  L    + ++A       ALA    G  ++S G G
Sbjct: 3316 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKMAVHSGGKHALALTQDG-KIFSWGEG 3373

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 3374 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3431

Query: 245  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            HG+   +  PK+VQ+L   + I VA G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 3432 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3490

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3491 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3536

Query: 363  G 363
            G
Sbjct: 3537 G 3537



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 3266 LNDKDQLGGLKGSKIK-LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGR- 3323

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V  P+L+  L    + + A+  G      L+++G+++++  G D +LGH  
Sbjct: 3324 -LGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGN 3382

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+ +L++  +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3383 SVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGDTATQ 3438

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + + VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 3439 MKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPL 3496

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++  LN +  + +  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 3497 LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 3548

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   ++VV +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3549 LVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3589



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+++++G+   G+  +G   +  +  P+L+ESLK+  +   
Sbjct: 3346 IKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDI 3403

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G    
Sbjct: 3404 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDA 3462

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G +VYS G G  GKLG G       P LI++   L +  V +  GA  +  +
Sbjct: 3463 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLAL 3519

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY+
Sbjct: 3520 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYA 3579

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+ +    +         P LV  L       V    ++SI W
Sbjct: 3580 WGDNDHGQQGNGSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3623



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 130/277 (46%), Gaps = 37/277 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P   +++  + + Q         +LS  G VY   +G++ +           P  + G  
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY----------PQRVYGFS 501

Query: 152 ENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           E  PV  IA+     + LAL    S   VYS G G GG+LGHG R     P+L+E   L+
Sbjct: 502 EK-PVTMIASHSDGTHYLALTQDSS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LV 555

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           +     +A G+ ++AV+  +G + TWG G YG LGHGN +   +P +V ALN    +HVA
Sbjct: 556 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVA 615

Query: 270 --TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
             +GD  T  V+  G V+S+G G    LG     DG         TP++V  L  +N   
Sbjct: 616 CGSGDSQTLCVTASGIVFSWGDGNYGKLGRGG-CDGSK-------TPKIVDKLLDIN--- 664

Query: 328 VQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
                   +Y     + ALT  G++Y +G G+  +LG
Sbjct: 665 -----VAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG 696



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 155/365 (42%), Gaps = 47/365 (12%)

Query: 12  SPILRPDIINERNGKRNLLGREV----------NGTPLYCRSLQGIRIIQAAAGAGRTML 61
           +P+L P I +     +N   +EV            +P YC ++  + I Q        M+
Sbjct: 416 APLLPPIITDRFQKNQNQTFQEVLSWGSGKLSSGSSPFYCDAIAELGIKQLCCTERALMI 475

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSRE 119
           +S +G VY     S  E +Y          PQ V   S K + ++ +         L+++
Sbjct: 476 LSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALTQD 523

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
             VY++  G+  RLGH       EP  L+  L +  +  IA G  Y   L+   S   +Y
Sbjct: 524 SSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGELY 579

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           + G G  G+LGHG+  +   P L+       +  V   +G      V   G V +WG G 
Sbjct: 580 TWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           YG LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE   LGH  
Sbjct: 640 YGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH-- 697

Query: 300 IADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                GN   ++  P+++  L  K+V E  V          N H  ALTE   +Y +G  
Sbjct: 698 -----GNEE-HIRYPKVIEVLXTKKVKELCVG---------NFHVLALTEDQLVYGWGRN 742

Query: 358 DKGQL 362
           D GQ+
Sbjct: 743 DYGQI 747



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   LLA+   
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT-- 4341

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4342 -ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4400

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 4401 YSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4460

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4461 GRLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4507

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4508 SWGDGDYGKLG 4518



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R +   P     L G  I+  A G   +  I+ AG +Y +GK  +G   +G 
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L  +P+LVE+L++  V+  A G  +  T  ++ +  V+++  G+  +LG       
Sbjct: 4468 SEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4525

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + V+++  G  + +AL    SG A+Y+ G G   +LGHG+    + PR
Sbjct: 4526 KIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIYTWGKGDYHRLGHGTDDHVRRPR 4581

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             +   Q    + + +A G+ H       G V TWG    G LG G       P++V AL 
Sbjct: 4582 KVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4639

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4640 GKKITRVACGSAHTLAWS 4657



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            Q   V  WG      LG        +P   + L+ +K IH+A G  T FVVS++G +Y+ 
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3316

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            G G +  LG   + D      +NV  P+L+  L Q   + + +          H  ALT+
Sbjct: 3317 GEGTNGRLG---LGD-----DSNVCEPKLIPFLSQYMIKKMAVH-----SGGKHALALTQ 3363

Query: 348  SGKLYAFGAGDKGQLG 363
             GK++++G G+ G+LG
Sbjct: 3364 DGKIFSWGEGEDGKLG 3379



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3494 TPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3551

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
             L+   VV  A+G      ++  G+VY  +WG++           V   P L+  L++  
Sbjct: 3552 GLRGKKVVHVAVGALHCLAVTDTGQVY--AWGDNDHGQQGNGSTIVNKKPSLVHELDDAR 3609

Query: 156  VVQIAAGYCYLLA--LACQPS 174
            V +++ G  + +A  L  QP+
Sbjct: 3610 VNRVSCGSSHSIAWVLTDQPA 3630


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  +R +Q   G    + ++  G+VYA G  + G    G+ GT  V  P L+ES
Sbjct: 4283 PVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR--LGIGGTDSVMVPTLLES 4340

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++FV + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 4341 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEE--LLGT 4398

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+L+E  Q   
Sbjct: 4399 ----EIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4451

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   +P  +++L  +  I V  
Sbjct: 4452 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4511

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G +Y++G G+   LGH            +V  P+ V +L+   ++++ I
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISI 4561

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4562 A-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4589



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 29/301 (9%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            VY +G   KD  G    G++G+K +  P   E L  +  +  A G+    V+S+EG++Y 
Sbjct: 3256 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3310

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
               G + RLG   + N  EP  L+  L    + ++A       ALA    G  ++S G G
Sbjct: 3311 CGEGTNGRLGLGDDSNVCEPK-LIPFLSQYMIKKVAVHSGGKHALALTQDG-KIFSWGEG 3368

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG LG
Sbjct: 3369 EDGKLGHGNSVSLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRLG 3426

Query: 245  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            HG+   +  PK+VQ+L   + I VA G  D  T  ++ DG VYS+G G+   LG    +D
Sbjct: 3427 HGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG-SD 3485

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            G         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +L
Sbjct: 3486 G-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFRL 3531

Query: 363  G 363
            G
Sbjct: 3532 G 3532



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 3261 LNDKDQLGGLKGSKIK-LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGR- 3318

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V  P+L+  L    + + A+  G      L+++G+++++  G D +LGH  
Sbjct: 3319 -LGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGN 3377

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+ +L++  +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3378 SVSLDKPR-LIESLKSKRIRDIACGSGHSAAIT---SSGELYTWGLGEYGRLGHGDTATQ 3433

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + + VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 3434 MKPKLVQS--LVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPL 3491

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++  LN +  + +  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 3492 LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 3543

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   ++VV +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3544 LVEGLR--GKKVVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3584



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+++++G+   G+  +G   +  +  P+L+ESLK+  +   
Sbjct: 3341 IKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG--NSVSLDKPRLIESLKSKRIRDI 3398

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G    
Sbjct: 3399 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPK-LVQSLVGQRVIQVACGSRDA 3457

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G +VYS G G  GKLG G       P LI++   L +  V +  GA  +  +
Sbjct: 3458 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLAL 3514

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY+
Sbjct: 3515 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYA 3574

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+ +    +         P LV  L       V    ++SI W
Sbjct: 3575 WGDNDHGQQGNGSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3618



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 37/277 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P   +++  + + Q         +LS  G VY   +G++ +           P  + G  
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY----------PQRVYGFS 493

Query: 152 ENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           E  PV  IA+     + LAL    S   VYS G G GG+LGHG R     P+L+E   L+
Sbjct: 494 EK-PVTMIASHSDGTHYLALTQDSS---VYSWGNGDGGRLGHGDRVWYDEPKLVEA--LV 547

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           +     +A G+ ++AV+  +G + TWG G YG LGHGN +   +P +V ALN    ++VA
Sbjct: 548 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVA 607

Query: 270 --TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
             +GD  T  V+  G V+S+G G    LG     DG         TP++V  L  +N   
Sbjct: 608 CGSGDSQTLCVTASGIVFSWGDGNYGKLGRGG-CDGSK-------TPKIVDKLLDIN--- 656

Query: 328 VQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
                   +Y     + ALT  G++Y +G G+  +LG
Sbjct: 657 -----VAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG 688



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 155/365 (42%), Gaps = 47/365 (12%)

Query: 12  SPILRPDIINERNGKRNLLGREV----------NGTPLYCRSLQGIRIIQAAAGAGRTML 61
           +P+L P I +     +N   +EV            +P YC ++  + I Q        M+
Sbjct: 408 APLLPPIITDRFQKNQNQTFQEVLSWGSGKLSSGSSPFYCDAIAELGIKQLCCTERALMI 467

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSRE 119
           +S +G VY     S  E +Y          PQ V   S K + ++ +         L+++
Sbjct: 468 LSISGNVYMMYYGS--ETQY----------PQRVYGFSEKPVTMIASHSDGTHYLALTQD 515

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
             VY++  G+  RLGH       EP  L+  L +  +  IA G  Y   L+   S   +Y
Sbjct: 516 SSVYSWGNGDGGRLGHGDRVWYDEPK-LVEALVDKNITFIACGSTYSAVLS---SNGELY 571

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           + G G  G+LGHG+  +   P L+       +  V   +G      V   G V +WG G 
Sbjct: 572 TWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGN 631

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           YG LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE   LGH  
Sbjct: 632 YGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH-- 689

Query: 300 IADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                GN   ++  P+++  L  K+V E  V          N H  ALTE   +Y +G  
Sbjct: 690 -----GNEE-HIRYPKVIEVLKPKKVKELCVG---------NFHVLALTEDQLVYGWGRN 734

Query: 358 DKGQL 362
           D GQ+
Sbjct: 735 DYGQI 739



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   LLA+   
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT-- 4308

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4309 -ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4367

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 4368 YSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4427

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4428 GRLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4474

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4475 SWGDGDYGKLG 4485



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R +   P     L G  I+  A G   +  I+ AG +Y +GK  +G   +G 
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L  +P+LVE+L++  V+  A G  +  T  ++ +  V+++  G+  +LG       
Sbjct: 4435 SEDQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4492

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + V+++  G  + +AL    SG A+Y+ G G   +LGHG+    + PR
Sbjct: 4493 KIPMKI-ESLAGLGVIKVECGSQFSVALT--RSG-AIYTWGKGDYHRLGHGTDDHVRRPR 4548

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             +   Q    + + +A G+ H       G V TWG    G LG G       P++V AL 
Sbjct: 4549 KVAALQ--GKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4606

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4607 GKKITRVACGSAHTLAWS 4624



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 13/136 (9%)

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            Q   V  WG      LG        +P   + L+ +K IH+A G  T FVVS++G +Y+ 
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYAC 3311

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            G G +  LG   + D      +NV  P+L+  L Q   + V +          H  ALT+
Sbjct: 3312 GEGTNGRLG---LGD-----DSNVCEPKLIPFLSQYMIKKVAVHSGGK-----HALALTQ 3358

Query: 348  SGKLYAFGAGDKGQLG 363
             GK++++G G+ G+LG
Sbjct: 3359 DGKIFSWGEGEDGKLG 3374



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3489 TPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3546

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
             L+   VV  A+G      ++  G+VY  +WG++           V   P L+  L++  
Sbjct: 3547 GLRGKKVVHVAVGALHCLAVTDTGQVY--AWGDNDHGQQGNGSTIVNKKPSLVHELDDAR 3604

Query: 156  VVQIAAGYCYLLA--LACQPS 174
            V +++ G  + +A  L  QP+
Sbjct: 3605 VNRVSCGSSHSIAWVLTDQPA 3625


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 165/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  +R +Q   G      ++  G+VYA G  + G    G+ GT  V  P L+ES
Sbjct: 3977 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGR--LGIGGTDSVMVPTLLES 4034

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++FV + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 4035 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEE--LLGT 4092

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+LIE  Q   
Sbjct: 4093 ----EIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYK 4145

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   +P  +++L  +  + V  
Sbjct: 4146 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4205

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G +Y++G G+   LGH            +V  P+ V +L+   ++++ I
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISI 4255

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A T+ G+++ +G  D+GQLG
Sbjct: 4256 A-TGSL----HCVACTDKGEVFTWGDNDEGQLG 4283



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 151/302 (50%), Gaps = 31/302 (10%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            VY +G   KD  G    G++G+K +  P   E L  +  V  A G+    V+S+EG++Y 
Sbjct: 2936 VYVWGLNDKDQLG----GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYA 2990

Query: 125  FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
               G + RLG   + N  EP P+   +   I  V + +G  + LAL        V+S G 
Sbjct: 2991 CGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALT---QDGKVFSWGE 3047

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  GKLGHG+      PRLIE  +   ++   +A G+ H+A +   G + TWG G YG L
Sbjct: 3048 GEDGKLGHGNSISLDKPRLIESLKSKRIRD--IACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            GHG+   +S PK+VQ+L   + I +A G  D  T  ++ DG VYS+G G+   LG    +
Sbjct: 3106 GHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG-S 3164

Query: 302  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
            DG         TP L+  L  +   VVQI           + ALT+ G+++ +G GD  +
Sbjct: 3165 DG-------CYTPLLIDRLNGLG--VVQIECGAQF-----SLALTKYGEVWTWGKGDYFR 3210

Query: 362  LG 363
            LG
Sbjct: 3211 LG 3212



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 136/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G   +  +  P+L+ESLK+  +   
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHG--NSISLDKPRLIESLKSKRIRDI 3078

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH       +P  L+ +L    ++QIA G    
Sbjct: 3079 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPK-LVQSLVGQRIIQIACGSRDA 3137

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G+ VYS G G  GKLG G       P LI++   L +  V +  GA  +  +
Sbjct: 3138 QTMALTADGL-VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGV--VQIECGAQFSLAL 3194

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY+
Sbjct: 3195 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYA 3254

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G G    N   P LV  L       V    ++SI W
Sbjct: 3255 WGDNDHGQ-------QGNGTTIVNK-KPSLVHELDDARVNRVSCGSSHSIAW 3298



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 40/297 (13%)

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           +SP   +++  + + Q         +LS  G VY   +G++ +           P  + G
Sbjct: 450 SSPFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGSETQY----------PQRVYG 499

Query: 150 TLENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
             E  P++ IA+     + LAL    S   VYS G G GG+LGHG R     P+LIE   
Sbjct: 500 FSEK-PIIMIASHSDGTHYLALTQDNS---VYSWGNGDGGRLGHGDRAWYDEPKLIEALV 555

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
             N+    +A G+ ++A +  +G + TWG G YG LGHGN +   +P +V ALN    ++
Sbjct: 556 EKNI--TFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVY 613

Query: 268 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           VA  +GD  T  V+  G V+S+G G    LG     DG         TP++V  L  +N 
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGG-CDGSK-------TPKIVDKLLDIN- 664

Query: 326 RVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                     +Y     + ALT  G++Y +G G+  +LG     N+     P+ +DI
Sbjct: 665 -------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG---HGNEDHVRYPKIIDI 711



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 157/364 (43%), Gaps = 45/364 (12%)

Query: 12  SPILRPDIINERNGKRNLLGREV---------NGT-PLYCRSLQGIRIIQAAAGAGRTML 61
           +P+L P I +      N   +EV         NG+ P Y  ++  + I Q        M+
Sbjct: 416 APLLPPIIADRFQKNHNQTFQEVIAWGSVKLGNGSSPFYYDTIAELGIKQLCCTERALMI 475

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVLSR 118
           +S  G VY     S  E +Y          PQ V        I +   + G  + A L++
Sbjct: 476 LSVNGNVYMMYYGS--ETQY----------PQRVYGFSEKPIIMIASHSDGTHYLA-LTQ 522

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
           +  VY++  G+  RLGH       EP  L+  L    +  IA G  Y  AL+   S   +
Sbjct: 523 DNSVYSWGNGDGGRLGHGDRAWYDEPK-LIEALVEKNITFIACGSTYSAALS---SNGEL 578

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           Y+ G G  G+LGHG+  +   P L+       +  V   +G      V   G V +WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
            YG LG G  +    PK+V  L D+    V  G   +  ++  G+VY++G GE+  LGH 
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGH- 697

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                 GN   +V  P+++  LK   ++V ++ +      N H  ALTE   +Y +G  D
Sbjct: 698 ------GNED-HVRYPKIIDILK--TKKVKELCVG-----NLHVLALTEDQLIYGWGRND 743

Query: 359 KGQL 362
            GQ+
Sbjct: 744 YGQI 747



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            +LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+   
Sbjct: 3946 MLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 4002

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4003 -ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++ L   + + +A G + +  ++  G +Y++G G  
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         LTP+L+ +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4122 GRLGHGDSEDQ--------LTPKLIEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4168

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4169 SWGDGDYGKLG 4179



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G  I+  A G   +  I+ AG +Y +GK  +G   +G    +L  +P+L+E+
Sbjct: 4083 PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLIEA 4140

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4141 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLG 4199

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG A+Y+ G G   +LGHG+    + PR +   Q    + + 
Sbjct: 4200 VVKVECGSQFSVALT--RSG-AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIIS 4254

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4255 IATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4314

Query: 276  FVVS 279
               S
Sbjct: 4315 LAWS 4318



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            Q   V  WG      LG        +P   + L+ +K +H+A G  T FVVS++G +Y+ 
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            G G +  LG   + D      +NV  P+ +  L Q   + V +          H  ALT+
Sbjct: 2992 GEGTNGRLG---LGDD-----SNVCEPKPIPFLSQYVIKKVSVHSGGK-----HALALTQ 3038

Query: 348  SGKLYAFGAGDKGQLG 363
             GK++++G G+ G+LG
Sbjct: 3039 DGKVFSWGEGEDGKLG 3054



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 5/140 (3%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3169 TPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3226

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L+   V+  A+G      ++  G+VY +   +  + G+ T   + +P  L+  L++  V
Sbjct: 3227 GLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPS-LVHELDDARV 3285

Query: 157  VQIAAGYCYLLA--LACQPS 174
             +++ G  + +A  L  QP+
Sbjct: 3286 NRVSCGSSHSIAWVLTDQPT 3305


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 165/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  +R +Q   G      ++  G+VYA G  + G    G+ GT  V  P L+ES
Sbjct: 3920 PVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGR--LGIGGTDSVMMPTLLES 3977

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++FV + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 3978 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEE--LLGT 4035

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V +A G  +  A+    S   +Y+ G G  G+LGHG   D+  P+L+E  Q   
Sbjct: 4036 ----EIVDVACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYK 4088

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   VP  +++L  +  I V  
Sbjct: 4089 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVEC 4148

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G +Y++G G+   LGH            +V  P+ V +L+   ++++ I
Sbjct: 4149 GSQFSVALTRSGSIYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISI 4198

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4199 A-TGSL----HCVACSDKGEVFTWGDNDEGQLG 4226



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 175/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y  SL  ++ +  A G+    ++S  G++YA G+ + G  
Sbjct: 2916 LNDKDQLGGLKGSKIK-LPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRL 2974

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G  G      P+ +  L    + + A+  G      L+++GRV+++  G D +LGH  
Sbjct: 2975 GLGDDGN--ACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGN 3032

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+ +L++  +  +A G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3033 CSSLDKPR-LIESLKSKRIRDVACGSGHSAAIT---SSGELYTWGLGEYGRLGHGDTNTQ 3088

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + + VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 3089 LKPKLVQ--SLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPL 3146

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            +V  LN +  + +  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 3147 LVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 3198

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   ++V+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3199 LVEGLR--GKKVIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3239



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G      +  P+L+ESLK+  +   
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHG--NCSSLDKPRLIESLKSKRIRDV 3053

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+ +L    V+Q+A G    
Sbjct: 3054 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPK-LVQSLVGQRVIQVACGSRDA 3112

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G +VYS G G  GKLG G       P L+++   L +  V +  GA  +  +
Sbjct: 3113 QTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQIECGAQFSLAL 3169

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY+
Sbjct: 3170 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYA 3229

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+ +    +         P LV  L       V    ++SI W
Sbjct: 3230 WGDNDHGQQGNGSTIVNK--------KPSLVHELDDARVNRVSCGSSHSIAW 3273



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 147/329 (44%), Gaps = 35/329 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P YC ++  + I Q        M++S +G VY     S  E +Y          PQ V 
Sbjct: 452 SPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGS--ETQY----------PQRVY 499

Query: 97  SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              + FV   A    G  + A L+ +  VY++  G+  RLGH       EP  L+ +L +
Sbjct: 500 GFSDKFVAMIASHPDGKHYLA-LTEDSSVYSWGNGDGGRLGHGDRTWYEEPK-LIESLVD 557

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             +  IA G  Y  AL+   S   +Y+ G G  G+LGHG+  D   P L+       +  
Sbjct: 558 KNITFIACGSTYSAALS---SNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVY 614

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V   +G      V   G V +WG G YG LG G       PK+V  L D+    V  G  
Sbjct: 615 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQ 674

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++  G+VY++G GE+  LGH       GN   +V  P+ + +LK   ++V ++ + 
Sbjct: 675 FSAALTAYGEVYTWGKGEAYRLGH-------GNEE-HVRYPKAIEALK--TKKVKELCVG 724

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                + H  ALTE   +Y +G  D GQ+
Sbjct: 725 -----SLHVLALTEDQLVYGWGRNDYGQI 748



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 43/295 (14%)

Query: 75  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           ++G  ++G  G+    SP   +++  + + Q         +LS  G VY   +G++ +  
Sbjct: 440 AWGSVKFGGTGS----SPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGSETQY- 494

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
                    P  + G  +   V  IA+   G  YL AL    S   VYS G G GG+LGH
Sbjct: 495 ---------PQRVYGFSDKF-VAMIASHPDGKHYL-ALTEDSS---VYSWGNGDGGRLGH 540

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G RT  + P+LIE   L++     +A G+ ++A +  +G + TWG G YG LGHGN +  
Sbjct: 541 GDRTWYEEPKLIES--LVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV 598

Query: 252 SVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
            VP +V ALN    ++VA  +GD  T  V+  G V+S+G G+   LG       +     
Sbjct: 599 MVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSK----- 653

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
              TP++V  L  +N           +Y     + ALT  G++Y +G G+  +LG
Sbjct: 654 ---TPKIVDKLLDIN--------VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG 697



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG   E   V+   L  +L  +  VQ+  G   L A+   
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGG-LEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT-- 3945

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3946 -ADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++ L   + + VA G + +  ++  G +Y++G G  
Sbjct: 4005 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRY 4064

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         LTP+LV +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4065 GRLGHGDSEDQ--------LTPKLVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4111

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4112 SWGDGDYGKLG 4122



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G  I+  A G   +  I+ AG +Y +GK  +G   +G    +L  +P+LVE+
Sbjct: 4026 PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL--TPKLVEA 4083

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4084 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKI-ESLAGLG 4142

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+++  G  + +AL    SG ++Y+ G G   +LGHG+    + PR +   Q    + + 
Sbjct: 4143 VIKVECGSQFSVALT--RSG-SIYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKIIS 4197

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4198 IATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHT 4257

Query: 276  FVVS 279
               S
Sbjct: 4258 LAWS 4261



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            P   AVY  G     +LG    +  K P   E   L  L+PV +A G+    VV Q+G++
Sbjct: 2906 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSES--LSKLKPVHIAGGSKTLFVVSQEGKL 2963

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCG 290
               G G  G LG G++     PK +  L+   +K + V +G      +++DG V+S+G G
Sbjct: 2964 YACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEG 3023

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
            E   LGH       GN  +++  P+L+ SLK    R V          + H+ A+T SG+
Sbjct: 3024 EDGKLGH-------GN-CSSLDKPRLIESLKSKRIRDVACG-------SGHSAAITSSGE 3068

Query: 351  LYAFGAGDKGQLGIELVNNQ 370
            LY +G G+ G+LG    N Q
Sbjct: 3069 LYTWGLGEYGRLGHGDTNTQ 3088



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 10/241 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL    I   A G+  +  +S  G++Y +G+ ++G   +G     +V  P LV +
Sbjct: 549 PKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMV--PTLVSA 606

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP 155
           L    +V  A G+  +  L        FSWG+    +LG         P  ++  L +I 
Sbjct: 607 LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPK-IVDKLLDIN 665

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V ++  G  +  AL        VY+ G G   +LGHG+    ++P+ IE  +   ++ + 
Sbjct: 666 VAKVYCGGQFSAALTAYGE---VYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELC 722

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V  G+ H   + +D  V  WG   YG +        S P +   L+    I +  G   +
Sbjct: 723 V--GSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQS 780

Query: 276 F 276
           F
Sbjct: 781 F 781



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 24/217 (11%)

Query: 147  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            L  T +  P ++IA   C    + C+  G+ +      +G +  + ++       L   +
Sbjct: 2837 LQDTKKYYPCIEIAIKQCRNGGIDCKIHGLQI------IGKRKTYENQLATSVSFLASDW 2890

Query: 207  QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            +++  Q     A +       Q   V  WG      LG        +P   ++L+ +K +
Sbjct: 2891 EIVQEQ-----ASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPV 2945

Query: 267  HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            H+A G  T FVVS++G +Y+ G G +  LG     DG      N   P+ +  L Q   +
Sbjct: 2946 HIAGGSKTLFVVSQEGKLYACGEGTNGRLGLG--DDG------NACEPKPIPFLSQYVIK 2997

Query: 327  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             V +          H  ALT+ G+++++G G+ G+LG
Sbjct: 2998 KVAVHSGGK-----HALALTQDGRVFSWGEGEDGKLG 3029


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 27/335 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  T+ +     V +FG+   G+  +G    + +  P+++ +L +  +   A
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL--PRIIGALNDCEISLVA 63

Query: 108 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G +  TA  +    +Y++ WG+  RLGH    +   PHP+   L+ + + QIA G  + 
Sbjct: 64  CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHC 122

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        VYS G    G+LG G   D   P  +  F+ ++++  ++AAGA H A V
Sbjct: 123 LAVTADGE---VYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK--MLAAGAEHTAAV 177

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G++  WGWGRYG LG G+     +P  V A+ D K   VA G   T  VS+ G +Y+
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYT 237

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH   AD         L P  V +L + N  + Q+S      W  HT ALT
Sbjct: 238 YGWSKYGQLGHGDYAD--------HLLPHQVAALAEFN--ITQVSGG----WR-HTVALT 282

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           E+GKLY +G    GQ+G   V++ T   +P+ + I
Sbjct: 283 EAGKLYGWGWNKFGQVGSGDVDDHT---SPQLISI 314



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 15/269 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+ I Q A G    + ++  G+VY++G++  G+   G     LV  P  + +
Sbjct: 101 PHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV--PHKLLA 158

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIP 155
            + + V   A G   TA ++  G++Y + WG    LG     + + P   P +G   +  
Sbjct: 159 FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG---DEK 215

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +  +A G+ + +A++   SG  +Y+ G    G+LGHG   D   P  +      N+  V 
Sbjct: 216 MCMVACGWRHTIAVS--QSG-KLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQV- 271

Query: 216 VAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDY 273
             +G W H   + + G++  WGW ++G +G G+ +  + P+++       + + V+ G  
Sbjct: 272 --SGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWR 329

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            T  V++  +VYS+G G S  LGH    D
Sbjct: 330 HTVAVTDKNNVYSWGRGTSGQLGHGDAVD 358



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 13/242 (5%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   + +  P    + +G+ +   AAGA  T  ++D G++Y +G   +G    G
Sbjct: 138 QNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLG 197

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +G +++  P  V ++ +  +   A G   T  +S+ G++YT+ W    +LGH    + +
Sbjct: 198 DRGDRML--PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L    + Q++ G+ + +AL        +Y  G    G++G G   D   P+L
Sbjct: 256 LPHQV-AALAEFNITQVSGGWRHTVALT---EAGKLYGWGWNKFGQVGSGDVDDHTSPQL 311

Query: 203 IE---QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           I    Q Q +    V V+ G  H   V     V +WG G  G LGHG+    S PK +QA
Sbjct: 312 ISIPGQHQRV----VQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQA 367

Query: 260 LN 261
           L+
Sbjct: 368 LS 369


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 164/336 (48%), Gaps = 27/336 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + Q +A       +  +G+V+  G +S     +G    + +  P+LVE+LK +   Q A 
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAA 223

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 167
           G  FT  L+ +G VYT       +LGH    +   P  ++  LE + PVVQIAAG  Y +
Sbjct: 224 GLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSYAM 282

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V+S G G    LGHG + +E  PR I+ F+   +  V ++AG  H   + 
Sbjct: 283 AVT---DDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD 339

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV+ + G VY F
Sbjct: 340 SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399

Query: 288 GCGESASLGHNAIADGQGNRHAN--VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           G     SLG         +R A+  V+ P ++ SL+     + QIS    +Y   HT A+
Sbjct: 400 GWMGFGSLGFP-------DRGASDKVMRPWILDSLR--GHYISQIS--TGLY---HTVAV 445

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              G+++ FG  ++ QLG     + T RG P   +I
Sbjct: 446 XNKGQIFGFGDNERAQLG-----HDTLRGCPVPTEI 476



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+G+   Q AAG   T+ ++  G VY  G ++ G+  +G   T    +P++VE 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHG--DTVDRRTPKIVEL 264

Query: 98  LKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
           L+ +  VVQ A G  +   ++ +G V++F  G++  LGH  + N++ P  +     + I 
Sbjct: 265 LEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+I+AG  +++AL    SG  VY+ G G  G LGHG   D+  P ++    L +   V 
Sbjct: 325 VVRISAGDEHVVAL--DSSGF-VYTWGKGYCGALGHGDEIDKTTPEILS--SLKSHLAVQ 379

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+   G V  +GW  +G LG    G  +    P ++ +L       ++TG 
Sbjct: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGL 439

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V   G ++ FG  E A LGH+ +
Sbjct: 440 YHTVAVXNKGQIFGFGDNERAQLGHDTL 467



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRV 232
           +VYS G  L G LGHG  T +        F  +N  P+     V+A   HAA V Q G V
Sbjct: 130 SVYSCGSSLCGVLGHGPETTQ-----CVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEV 184

Query: 233 CTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            T G     C GHG+       P++V+AL  V    VA G   T  ++  G VY+ G   
Sbjct: 185 FTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNT 244

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH    D +        TP++V  L+ V   VVQI+   S     +  A+T+ G +
Sbjct: 245 HGQLGHGDTVDRR--------TPKIVELLEGVGP-VVQIAAGPS-----YAMAVTDDGTV 290

Query: 352 YAFGAGDKGQLG 363
           ++FG+G    LG
Sbjct: 291 HSFGSGSNFCLG 302



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 7/130 (5%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKL 88
           G E++ T P    SL+    +Q  A   +T ++ D G VY FG   FG   +  +G +  
Sbjct: 358 GDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDK 417

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-----EPNDVE 143
           V  P +++SL+  ++ Q + G + T  +  +G+++ F     A+LGH T      P ++ 
Sbjct: 418 VMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIF 477

Query: 144 PHPLLGTLEN 153
             P +  +E 
Sbjct: 478 ASPTVAEMER 487


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 164/336 (48%), Gaps = 27/336 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + Q +A       +  +G+V+  G +S     +G    + +  P+LVE+LK +   Q A 
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHG-DTVRPIFRPRLVEALKGVPCKQVAA 223

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 167
           G  FT  L+ +G VYT       +LGH    +   P  ++  LE + PVVQIAAG  Y +
Sbjct: 224 GLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTP-KIVELLEGVGPVVQIAAGPSYAM 282

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V+S G G    LGHG + +E  PR I+ F+   +  V ++AG  H   + 
Sbjct: 283 AVT---DDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD 339

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V TWG G  G LGHG+E  ++ P+++ +L    A+ V      TFV+ + G VY F
Sbjct: 340 SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399

Query: 288 GCGESASLGHNAIADGQGNRHAN--VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           G     SLG         +R A+  V+ P ++ SL+     + QIS    +Y   HT A+
Sbjct: 400 GWMGFGSLGFP-------DRGASDKVMRPWILDSLR--GHYISQIS--TGLY---HTVAV 445

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              G+++ FG  ++ QLG     + T RG P   +I
Sbjct: 446 NNKGQIFGFGDNERAQLG-----HDTLRGCPVPTEI 476



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 12/268 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+G+   Q AAG   T+ ++  G VY  G ++ G+  +G   T    +P++VE 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHG--DTVDRRTPKIVEL 264

Query: 98  LKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIP 155
           L+ +  VVQ A G  +   ++ +G V++F  G++  LGH  + N++ P  +     + I 
Sbjct: 265 LEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+I+AG  +++AL    SG  VY+ G G  G LGHG   D+  P ++    L +   V 
Sbjct: 325 VVRISAGDEHVVAL--DSSGF-VYTWGKGYCGALGHGDEIDKTTPEILS--SLKSHLAVQ 379

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGD 272
           V A      V+   G V  +GW  +G LG    G  +    P ++ +L       ++TG 
Sbjct: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGL 439

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAI 300
           Y T  V+  G ++ FG  E A LGH+ +
Sbjct: 440 YHTVAVNNKGQIFGFGDNERAQLGHDTL 467



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRV 232
           +VYS G  L G LGHG  T +        F  +N  P+     V+A   HAA V Q G V
Sbjct: 130 SVYSCGSSLCGVLGHGPETTQ-----CVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEV 184

Query: 233 CTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            T G     C GHG+       P++V+AL  V    VA G   T  ++  G VY+ G   
Sbjct: 185 FTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNT 244

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH    D +        TP++V  L+ V   VVQI+   S     +  A+T+ G +
Sbjct: 245 HGQLGHGDTVDRR--------TPKIVELLEGVGP-VVQIAAGPS-----YAMAVTDDGTV 290

Query: 352 YAFGAGDKGQLG 363
           ++FG+G    LG
Sbjct: 291 HSFGSGSNFCLG 302



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKL 88
           G E++ T P    SL+    +Q  A   +T ++ D G VY FG   FG   +  +G +  
Sbjct: 358 GDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDK 417

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           V  P +++SL+  ++ Q + G + T  ++ +G+++ F     A+LGH T
Sbjct: 418 VMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDT 466


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C SL  +R IQ A G      ++  G+VY+ G  + G    G+ GT  V  P L+ES
Sbjct: 3956 PAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGR--LGIGGTDSVMVPTLLES 4013

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++  G+D +LGH    +   P  L+  L  I 
Sbjct: 4014 IQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPK-LVEDLLGIE 4072

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+++E  Q   +  V 
Sbjct: 4073 IVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVA 4129

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      V  D  V +WG G YG LG G  +   VP  + +L  +  I V  G   +
Sbjct: 4130 CGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFS 4189

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH            +V  P+ V +L+   ++++ I+ T S
Sbjct: 4190 VALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISIA-TGS 4238

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H  A ++ G+++ +G  D+GQLG
Sbjct: 4239 L----HCVACSDKGEVFTWGDNDEGQLG 4262



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 176/349 (50%), Gaps = 30/349 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+    L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 2958 LNDKDQLGGLKGSKIK-IPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGR- 3015

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     +  P+L+  L    + + A+  G      L+++G+V+++  G D +LGH  
Sbjct: 3016 -LGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN 3074

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+ +L++  +  IA G  +  A+A   S   +Y+ G G  G+LGHG    +
Sbjct: 3075 CTTLDKPR-LIESLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLGHGDTATQ 3130

Query: 198  KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVP 254
              P+L+   Q L+ Q VV VA G+  A  +    DG V TWG G +G LG G  +    P
Sbjct: 3131 MKPKLV---QALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTP 3187

Query: 255  KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             +V  LN +  + V  G   +  +++ G+V+++G G+   LGH       GN H +V  P
Sbjct: 3188 LLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKP 3239

Query: 315  QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             LV  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3240 TLVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3281



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 35/329 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P YC ++  + I          +++S +G VY     S  E +Y          PQ + 
Sbjct: 455 SPFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYGS--ETQY----------PQRMH 502

Query: 97  SLKN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           S  +     +   + G  + A L+++G VY++  G+  RLGH    +  EP  L+ TL  
Sbjct: 503 SFSDKPVTMIASHSDGKHYLA-LTQDGCVYSWGNGDGGRLGHGDNISHDEPK-LIETLLE 560

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++ IA G  Y  AL+   SG  +Y+ G G  G+LGHGS  D   P L+   +   +  
Sbjct: 561 KNIIFIACGSTYSAALSA--SG-ELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVH 617

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V   +G      V   G V +WG G YG LG G  +    PK+V  L D+  + V  G  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQ 677

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++  G+VY++G G++  LGH       GN   +V  P+L+ SL+  ++++  +S+ 
Sbjct: 678 FSAALTARGEVYTWGKGDAYRLGH-------GNEE-HVRYPKLIESLR--DKKIKDLSVG 727

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            +     H  ALTE   +Y +G  D GQ+
Sbjct: 728 GT-----HILALTEDQFVYGWGRNDYGQI 751



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G   T  +  P+L+ESLK+  +   
Sbjct: 3038 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTT--LDKPRLIESLKSKRIRDI 3095

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 3096 ACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPK-LVQALSGQRVVQVACGSRDA 3154

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              ++    G  VY+ G G  GKLG G       P L+++   L +  V V  GA  +  +
Sbjct: 3155 QTMSLTADG-CVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGV--VQVECGAQFSLAL 3211

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY+
Sbjct: 3212 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3271

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+        NR      P LV  L       V    ++SI W
Sbjct: 3272 WGDNDHGQQGNGTTI---VNRK-----PSLVHELDDTRMNRVSCGSSHSIAW 3315



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 135/299 (45%), Gaps = 41/299 (13%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +V A+G   FG            +SP   +++  + +           +LS  G VY   
Sbjct: 441 EVLAWGGVKFGNG----------SSPFYCDAIAELGIKHLCCTERALLILSLSGNVYIMY 490

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
           +G++ +               + +  + PV  IA+       LA    G  VYS G G G
Sbjct: 491 YGSETQYPQR-----------MHSFSDKPVTMIASHSDGKHYLALTQDG-CVYSWGNGDG 538

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGHG       P+LIE   LL    + +A G+ ++A +   G + TWG G YG LGHG
Sbjct: 539 GRLGHGDNISHDEPKLIET--LLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHG 596

Query: 247 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           + +  +VP +V  L     +HVA  +GD  T  V+  G V+S+G G+   LG    +DG 
Sbjct: 597 SNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-SDGS 655

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   TP++V  L  +N  VV++           + ALT  G++Y +G GD  +LG
Sbjct: 656 K-------TPKIVDKLLDIN--VVRVFCGGQF-----SAALTARGEVYTWGKGDAYRLG 700



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG         P P   +L  +  +Q+A G   L A+   
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPC-ESLSALRPIQLAGGEQTLFAVT-- 3981

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VYS G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3982 -ADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+V+ L  ++ + +A G + +  ++  G +Y++G G  
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4101 GRLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4147

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4148 SWGDGDYGKLG 4158



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L GI I+  A G   +  I+ AG +Y +GK  +G   +G    +L   P++VE+
Sbjct: 4062 PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEA 4119

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG     +D    PL + +L  +
Sbjct: 4120 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGL 4177

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V+++  G  + +AL    SG AVY+ G G   +LGHG+    + PR +   Q    + +
Sbjct: 4178 GVIKVECGSQFSVALT--RSG-AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKII 4232

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   
Sbjct: 4233 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAH 4292

Query: 275  TFVVS 279
            T   S
Sbjct: 4293 TLAWS 4297



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 10/241 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    II  A G+  +  +S +G++Y +G+ ++G   +G      VT P LV +
Sbjct: 552 PKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTT 609

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP 155
           LK   VV  A G+  +  L        FSWG+    +LG         P  ++  L +I 
Sbjct: 610 LKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPK-IVDKLLDIN 668

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV++  G  +  AL  +     VY+ G G   +LGHG+    ++P+LIE  +   ++ + 
Sbjct: 669 VVRVFCGGQFSAALTARGE---VYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLS 725

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V  G  H   + +D  V  WG   YG +        S P +   L+    I +A+G   +
Sbjct: 726 V--GGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQS 783

Query: 276 F 276
           F
Sbjct: 784 F 784



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            E  P ++IA   C    + C+  G+ V      +G K    ++       L   +++L  
Sbjct: 2883 EYYPCIEIAIKQCRNGGIDCKIHGLRV------VGRKRIFENQLTTSVSFLASDWEVLQE 2936

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            Q  V A  +  A    Q   V  WG      LG        +P   + L+ +K IH+A G
Sbjct: 2937 Q--VTAQRSTDAP--PQQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGG 2992

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T F+VS++G +Y+ G G +  L       G G+ + N+  P+L+  L Q   + V + 
Sbjct: 2993 SKTLFIVSQEGKLYACGEGTNGRL-------GLGDDY-NMCEPKLIPFLSQYVIKKVAVH 3044

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     H  ALT+ GK++++G G+ G+LG
Sbjct: 3045 SGGK-----HALALTQDGKVFSWGEGEDGKLG 3071



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 5/140 (3%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3186 TPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3243

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L+   +V  A+G      ++  G+VY +   +  + G+ T   + +P  L+  L++  +
Sbjct: 3244 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPS-LVHELDDTRM 3302

Query: 157  VQIAAGYCYLLA--LACQPS 174
             +++ G  + +A  L  QP+
Sbjct: 3303 NRVSCGSSHSIAWILVDQPT 3322


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 163/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C SL  +R IQ A G      ++  G+VY+ G  + G    G+ GT  V  P L+ES
Sbjct: 3967 PAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGR--LGIGGTDSVMIPTLLES 4024

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++  G+D +LGH  + +   P  L+  L  + 
Sbjct: 4025 IQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPK-LIEDLLGVE 4083

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+++E  Q   +  V 
Sbjct: 4084 IIDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVA 4140

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      V  D  V +WG G YG LG G  +   VP  + +L  +  I V  G   +
Sbjct: 4141 CGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFS 4200

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH            +V  P+ V +L+   ++++ I+ T S
Sbjct: 4201 VALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISIA-TGS 4249

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H  A ++ G+++ +G  D+GQLG
Sbjct: 4250 L----HCVACSDKGEVFTWGDNDEGQLG 4273



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 2968 LNDKDQLGGLKGSKIK-LPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGR- 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V  P+ +  L    + + A+  G      L+++G+V+++  G D +LGH  
Sbjct: 3026 -LGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+ TL++  +  IA G  +  A+A   S   +Y+ G G  G+LGHG    +
Sbjct: 3085 NMSLDKPK-LIETLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLGHGDTVTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 3141 ARPKLVQT--LVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPL 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            VV+ LN +  + V  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 3199 VVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 LVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3291



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 146/329 (44%), Gaps = 35/329 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP YC ++  + I Q        M++S  G VY     S  E +Y          PQ V 
Sbjct: 455 TPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHGS--ETQY----------PQRVH 502

Query: 97  SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              +  V   A    G    A L+++G VY++  G+  RLGH    +  EP  +   LE 
Sbjct: 503 GFSDKLVTMIASHSDGKHHLA-LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEK 561

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             +V IA G  Y  AL+   SG  +Y+ G G  G+LGHG+  D   P L+   +   +  
Sbjct: 562 -NIVFIACGSTYSAALSV--SG-ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVH 617

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V   +G      V   G V +WG G YG LG G  +    PK+V  L D+  + V  G  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQ 677

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++  G+VY++G G++  LGH +          +V  P+++ SL+    + + +  T
Sbjct: 678 FSAALTAHGEVYTWGKGDTYRLGHGS--------EEHVRYPKIIESLRDKKIKDLSVGAT 729

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                  H   LTE   +Y +G  D GQ+
Sbjct: 730 -------HILVLTEDQFVYGWGRNDYGQI 751



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 137/293 (46%), Gaps = 16/293 (5%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G   +  +  P+L+E+LK+  +   
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDI 3105

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH        P  L+ TL    VVQ+A G    
Sbjct: 3106 ACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPK-LVQTLVGHRVVQVACGSRDA 3164

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G  VYS G G  GKLG G       P ++E+   L +  V V  GA  +  +
Sbjct: 3165 QTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGV--VQVECGAQFSLAL 3221

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY+
Sbjct: 3222 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 287  FGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +            QGN   +V   P LV  L+      V    ++SI W
Sbjct: 3282 WGDNDHGQ---------QGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAW 3325



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 17/277 (6%)

Query: 87   KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
            +L TS   + S   +   Q A+     A   +E  VY +   +  +LG   + + ++   
Sbjct: 2928 QLTTSVSFLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLGG-LKGSKIKLPV 2986

Query: 147  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
                L  +  + IA G   L  ++ +     +Y+ G G  G+LG G   +   P+ I   
Sbjct: 2987 YSEVLSKLKPIHIAGGSKTLFIVSQEGK---LYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043

Query: 207  QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
                ++ V V +G  HA  + QDG+V +WG G  G LGHGN      PK+++ L   +  
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR 3103

Query: 267  HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
             +A G   +  ++ +G++Y++G GE   LGH     G     A    P+LV +L  V  R
Sbjct: 3104 DIACGSGHSAAIASNGELYTWGLGEYGRLGH-----GDTVTQAR---PKLVQTL--VGHR 3153

Query: 327  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            VVQ++  +    +A T ALT  G +Y++G GD G+LG
Sbjct: 3154 VVQVACGSR---DAQTMALTTDGCVYSWGDGDFGKLG 3187



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG    P    P P   +L  +  +Q+A G   L A+   
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTAD 3994

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                 VYS G G  G+LG G       P L+E  Q + ++ V V++G  H   +  +G V
Sbjct: 3995 GK---VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN+     PK+++ L  V+ I +A G + +  ++  G +Y++G G  
Sbjct: 4052 YSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4112 GRLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4158

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4159 SWGDGDYGKLG 4169



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 97/188 (51%), Gaps = 19/188 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VYS G G GG+LGHG       P+LIE   LL    V +A G+ ++A +   G + TWG 
Sbjct: 530 VYSWGNGDGGRLGHGDTVSYDEPKLIEA--LLEKNIVFIACGSTYSAALSVSGELYTWGR 587

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASL 295
           G YG LGHGN +   +P +V  L     +HVA  +GD  T  V+  G V+S+G G+   L
Sbjct: 588 GNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 647

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G     DG         TP++V  L  +N  VV++   +       + ALT  G++Y +G
Sbjct: 648 GRGG-TDGSK-------TPKIVDKLLDIN--VVKVFCGSQF-----SAALTAHGEVYTWG 692

Query: 356 AGDKGQLG 363
            GD  +LG
Sbjct: 693 KGDTYRLG 700



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G+ II  A G   +  I+ AG +Y +GK  +G   +G    +L   P++VE+
Sbjct: 4073 PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEA 4130

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG     +D    PL + +L  +
Sbjct: 4131 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGL 4188

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V+++  G  + +AL    SG AVY+ G G   +LGHG+    + PR +   Q    + +
Sbjct: 4189 GVIKVECGSQFSVALT--RSG-AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKII 4243

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   
Sbjct: 4244 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 4303

Query: 275  TFVVS 279
            T   S
Sbjct: 4304 TLAWS 4308



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 10/241 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I+  A G+  +  +S +G++Y +G+ ++G   +G     ++  P LV +
Sbjct: 552 PKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMI--PTLVTT 609

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP 155
           LK   VV  A G+  +  L        FSWG+    +LG         P  ++  L +I 
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK-IVDKLLDIN 668

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV++  G  +  AL        VY+ G G   +LGHGS    ++P++IE  +   ++ + 
Sbjct: 669 VVKVFCGSQFSAALTAHGE---VYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLS 725

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V  GA H  V+ +D  V  WG   YG +        S P +   L+    I +A+G   +
Sbjct: 726 V--GATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASGPTQS 783

Query: 276 F 276
           F
Sbjct: 784 F 784



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 5/140 (3%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ ++Q   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 3196 TPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 3253

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L+   +V  A+G      ++  G+VY +   +  + G+ T   + +P  L+  LE+  V
Sbjct: 3254 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPS-LVHELEDARV 3312

Query: 157  VQIAAGYCYLLA--LACQPS 174
             +++ G  + +A  L  QPS
Sbjct: 3313 NRVSCGSSHSIAWVLVDQPS 3332



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 245 HGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           HG+E     P+ V   +D  V  I   +       +++DG VYS+G G+   LGH     
Sbjct: 491 HGSET--QYPQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVS 548

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                      P+L+ +L + N  +V I+  ++     ++ AL+ SG+LY +G G+ G+L
Sbjct: 549 YD--------EPKLIEALLEKN--IVFIACGST-----YSAALSVSGELYTWGRGNYGRL 593

Query: 363 G 363
           G
Sbjct: 594 G 594


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 156/318 (49%), Gaps = 24/318 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L    VV   
Sbjct: 17  RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALDGHEVVSVT 74

Query: 108 IGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S    +VY++ WG+  RLGH    +   P P+   L  + + QIA G  + 
Sbjct: 75  CGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHGLRIKQIACGDSHC 133

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VAAGA H A V
Sbjct: 134 LAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAAGAEHTAAV 188

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V  +  VK + VA G   T  VS  G +Y+
Sbjct: 189 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 248

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH    D         LTP  + +L++    + +IS      W  HT ALT
Sbjct: 249 YGWSKYGQLGHGDFEDH--------LTPHKLEALQE--NLISEISGG----WR-HTMALT 293

Query: 347 ESGKLYAFGAGDKGQLGI 364
             GKLY +G    GQ+G+
Sbjct: 294 SDGKLYGWGWNKFGQVGV 311



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 135/267 (50%), Gaps = 10/267 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++L G+RI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 111 TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 168

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  T+E + +
Sbjct: 169 AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKV-STVEGVKM 227

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V++A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E  Q   +  +  
Sbjct: 228 VKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEI-- 282

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+      P  V+  ++ K +H++ G   T
Sbjct: 283 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHT 341

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIAD 302
             V+E  +V+S+G G +  LGH    D
Sbjct: 342 LAVTERQNVFSWGRGTNGQLGHGESID 368



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ +   AAGA  T  +++ G++Y +G   +G    G
Sbjct: 149 QNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 208

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V +++ + +V+ A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 209 DRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 266

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L    EN+ + +I+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 267 TPHKLEALQENL-ISEISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGDNVDHCSPV- 321

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V +WG G  G LGHG     ++PK+++ L+
Sbjct: 322 --QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 379


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 163/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C SL  +R IQ A G      ++  G++Y+ G  + G    G+ GT  V  P L+ES
Sbjct: 4018 PAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGR--LGIGGTDSVMIPTLLES 4075

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++  G+D +LGH  + +   P  L+  L  + 
Sbjct: 4076 IQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPK-LIEDLLGVE 4134

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+++E  Q   +  V 
Sbjct: 4135 IVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVA 4191

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      V  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4192 CGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFS 4251

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH            +V  P+ V +L+   ++++ I+ T S
Sbjct: 4252 VALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIISIA-TGS 4300

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H  A ++ G+++ +G  D+GQLG
Sbjct: 4301 L----HCVACSDKGEVFTWGDNDEGQLG 4324



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 177/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y  +L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 3019 LNDKDQLGGLKGSKIK-LPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNG-- 3075

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     +  P+ +  L    + + A+  G      L+++G+V+++  G D +LGH  
Sbjct: 3076 RLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN 3135

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+  L++  +  IA G  +  A+A   S   +Y+ G G  G+LGHG    +
Sbjct: 3136 CISLDKPK-LIEVLKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLGHGDTITQ 3191

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 3192 TRPKLVQ--ALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPL 3249

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            +V  LN++  I V  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 3250 LVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 3301

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3302 LVEGLR--GKKIIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3342



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 152/303 (50%), Gaps = 33/303 (10%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            VY +G   KD  G    G++G+K +  P   E+L  +  +  A G+    ++S+EG++Y 
Sbjct: 3014 VYVWGLNDKDQLG----GLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 125  FSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
               G + RLG   + N  EP   P L     I  V + +G  + LAL        V+S G
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFV-IKKVAVHSGGKHALALT---QDGKVFSWG 3124

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G  GKLGHG+      P+LIE  +   ++   +A G+ H+A +  +G + TWG G YG 
Sbjct: 3125 EGEDGKLGHGNCISLDKPKLIEVLKSKRIRD--IACGSGHSAAIASNGELYTWGLGEYGR 3182

Query: 243  LGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            LGHG+   ++ PK+VQAL   + + VA G  D  T  ++ DG VYS+G G+   LG    
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG- 3241

Query: 301  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
            +DG         TP LV  L   N  V+Q+           + ALT+ G+++ +G GD  
Sbjct: 3242 SDG-------CYTPLLVDRLN--NLGVIQVECGAQF-----SLALTKYGEVWTWGKGDYF 3287

Query: 361  QLG 363
            +LG
Sbjct: 3288 RLG 3290



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 35/329 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP YC ++  + I Q        M++S  G VY     S  E +Y          PQ V 
Sbjct: 514 TPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHGS--ETQY----------PQRVH 561

Query: 97  SLKN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              +     +   A G  + A L+++G VY++  G+  RLGH    +  EP  +   LE 
Sbjct: 562 GFSDKPITMIASHADGKHYLA-LTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEK 620

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++ IA G  Y  AL+   +   +Y+ G G  G+LGHG+  D   P L+   +   +  
Sbjct: 621 -NIIFIACGSTYSAALS---ANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVH 676

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V   +G      V   G V +WG G YG LG G  +    PK+V  L D+  + V  G  
Sbjct: 677 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQ 736

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++  G+VY++G G++  LGH +          +V  P+++ SL+  + +V  +S+ 
Sbjct: 737 FSAALTAHGEVYTWGKGDAYRLGHGS--------EEHVRYPKVIESLR--DRKVKDLSVG 786

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            +     H  ALTE   +Y +G  D GQ+
Sbjct: 787 TT-----HILALTEDQFVYGWGRNDYGQI 810



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 16/293 (5%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G      +  P+L+E LK+  +   
Sbjct: 3099 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEVLKSKRIRDI 3156

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH        P  L+  L    VVQ+A G    
Sbjct: 3157 ACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALIGHRVVQVACGSRDA 3215

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G  VYS G G  GKLG G       P L+++    NL  + V  GA  +  +
Sbjct: 3216 QTMALTTDGY-VYSWGDGDFGKLGRGGSDGCYTPLLVDRLN--NLGVIQVECGAQFSLAL 3272

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY+
Sbjct: 3273 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYA 3332

Query: 287  FGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +            QGN   +V   P LV  L+      V    ++SI W
Sbjct: 3333 WGDNDHGQ---------QGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAW 3376



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 164/388 (42%), Gaps = 60/388 (15%)

Query: 3   TPAYQVAHLSPILRP-DIINERNGKRNLLGREVNGTPLYCRSL----------------- 44
           TP    A L P+LR  ++I     +R+L   + N TP  C  L                 
Sbjct: 405 TPPGSTAPLVPLLRRLNMIPATKSRRHL---DRNVTPGPCEVLLKYLRLPDDDAVSVDLR 461

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLV--TSPQLVES 97
           +   II          L+  A   Y F     GK +F E      G K    ++P   ++
Sbjct: 462 KAAVIIMCNLSRLAAPLLPPASTEYGFPRNGNGKQTFQEV-LAWGGVKFGNGSTPFYCDA 520

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           +  + + Q         +LS  G VY    G++ +           P  + G   + P+ 
Sbjct: 521 IAELGIKQLCCTERALMILSLNGNVYNMYHGSETQY----------PQRVHG-FSDKPIT 569

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            IA+       LA    G  VYS G G GG+LGHG       P+LIE   LL    + +A
Sbjct: 570 MIASHADGKHYLALTQDG-CVYSWGNGDGGRLGHGDTISYDEPKLIEA--LLEKNIIFIA 626

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTT 275
            G+ ++A +  +G + TWG G YG LGHGN +    P +V  L     +HVA  +GD  T
Sbjct: 627 CGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQT 686

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V+  G V+S+G G+   LG     DG         TP++V  L  +N  VV++   + 
Sbjct: 687 LCVTASGIVFSWGDGDYGKLGRGG-TDGSK-------TPKIVDKLLDIN--VVKVFCGSQ 736

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + ALT  G++Y +G GD  +LG
Sbjct: 737 F-----SAALTAHGEVYTWGKGDAYRLG 759



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG    P    P P   +L  +  +Q+A G   L A+   
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPC-ESLSALRPIQLAGGEQTLFAVTAD 4045

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                 +YS G G  G+LG G       P L+E  Q + ++ V V++G  H   +  +G V
Sbjct: 4046 GK---IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN+     PK+++ L  V+ + +A G + +  ++  G +Y++G G  
Sbjct: 4103 YSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH   +D Q       L P++V +L+  + +V+ ++  +    +A T  +T+   ++
Sbjct: 4163 GRLGHGD-SDDQ-------LRPKVVEALQ--DYKVIDVACGSG---DAQTLCVTDDDNVW 4209

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4210 SWGDGDYGKLG 4220



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G+ I+  A G   +  I+ AG +Y +GK  +G   +G    +L   P++VE+
Sbjct: 4124 PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEA 4181

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
            L++  V+  A G  +  T  ++ +  V+++  G+  +LG     +D    PL + +L  +
Sbjct: 4182 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGL 4239

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             VV++  G  + +AL    SG AVY+ G G   +LGHG+    + PR +   Q    + +
Sbjct: 4240 GVVKVECGSQFSVALT--RSG-AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKII 4294

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   
Sbjct: 4295 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 4354

Query: 275  TFVVS 279
            T   S
Sbjct: 4355 TLAWS 4359



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   ++L G R++Q A G+   +TM ++  G VY++G   FG+   G  G+    +P LV
Sbjct: 3194 PKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRG--GSDGCYTPLLV 3251

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            + L N+ V+Q   G  F+  L++ G V+T+  G+  RLGH  + +  +P  L+  L    
Sbjct: 3252 DRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP-TLVEGLRGKK 3310

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            ++ +A G  + LA+        VY+ G    G+ G+G+ +  + P L+   +
Sbjct: 3311 IIHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLE 3359



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            Q   V  WG      LG        +P   + L+ +K IH+A G  T F+VS++G +Y+ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            G G +  LG      G  N   N+  P+ +  L Q   + V +          H  ALT+
Sbjct: 3070 GEGTNGRLGL-----GDDN---NMCEPKAIPFLSQFVIKKVAVHSGGK-----HALALTQ 3116

Query: 348  SGKLYAFGAGDKGQLG 363
             GK++++G G+ G+LG
Sbjct: 3117 DGKVFSWGEGEDGKLG 3132


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 164/333 (49%), Gaps = 33/333 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            PL C SL  +R IQ A G      ++  G+VYA G  + G    G  G   V  P L+ES
Sbjct: 3918 PLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGALGR--LGTGGVDSVMVPTLLES 3975

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGT 150
            ++++F+ + A+  G      LS EG VY++  G+D +LGH     +  P  +E   LLGT
Sbjct: 3976 IQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEA--LLGT 4033

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 +V IA G  +  A++   S   +Y+ G G  G+LGHG   D+  P ++   Q   
Sbjct: 4034 ----EIVDIACGGHHSAAIS---SAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYK 4086

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V  D  V +WG G YG LG G  +   VP  +++L  +  + V  
Sbjct: 4087 VIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVEC 4146

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  ++  G VY++G G+   LGH            +V  P+ V++L+   +++V I
Sbjct: 4147 GSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVSALQ--GKKIVSI 4196

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + T S+    H  A ++ G++Y +G  D+GQLG
Sbjct: 4197 A-TGSL----HCVACSDKGEVYTWGDNDEGQLG 4224



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 154/320 (48%), Gaps = 29/320 (9%)

Query: 49   IIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
            ++Q    A R   +     VY +G   KD  G    G++G+K +  P   E L  +  + 
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG----GLKGSK-IKLPVHSEVLSKLKPIH 2959

Query: 106  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
             A G+    V+S+EG++Y    G + RLG     N  EP P +  L    + ++A     
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKP-IPFLSQYIIKKVAVHSGG 3018

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
              ALA    G  V+S G G  GKLGHG+R     PRLIE  +   ++   +A G+ H+A 
Sbjct: 3019 KHALALTQDG-KVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRD--IACGSGHSAA 3075

Query: 226  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGD 283
            +  +G + TWG G YG LGHG+      PK+V AL   + I VA G  D  T  ++EDG 
Sbjct: 3076 IASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135

Query: 284  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            VYS+G G+   LG    +DG         +P  V  L  +   VVQ+           + 
Sbjct: 3136 VYSWGDGDFGKLGRGG-SDG-------CYSPLPVDRLNGLG--VVQVECGAQF-----SL 3180

Query: 344  ALTESGKLYAFGAGDKGQLG 363
            ALT+ G+++ +G GD  +LG
Sbjct: 3181 ALTKYGEVWTWGKGDYFRLG 3200



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G + +  +  P+L+E+LK+  +   
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDI 3066

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 3067 ACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPK-LVDALVGQRVIQVACGSRDA 3125

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G +VYS G G  GKLG G       P  +++   L +  V V  GA  +  +
Sbjct: 3126 QTMALTEDG-SVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGV--VQVECGAQFSLAL 3182

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K +HVA G      V++ G VY+
Sbjct: 3183 TKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYA 3242

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G G+   N   P LV +L+      V    ++SI W
Sbjct: 3243 WGDNDHGQ-------QGNGSTMVN-RKPSLVHNLEDAKVNRVACGSSHSIAW 3286



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 42/299 (14%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +V A+G   FG            + P   +++  I V Q         +LS  G+VY   
Sbjct: 434 EVLAWGNVHFGSG----------SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMY 483

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
           +G++ +           P  + G  ++  VVQIA+       LA    G+ VYS G G G
Sbjct: 484 YGSETQY----------PQSVYGFADD--VVQIASHPDGKHYLALTTKGI-VYSWGNGDG 530

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGHG       P++IE   L +     +A G+ ++A +   G + TWG G YG LGHG
Sbjct: 531 GRLGHGDSFSCDEPQVIEV--LSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHG 588

Query: 247 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
             +  S+P VV ALN     HVA  +GD  T  V+  G V+S+G G+   LG    +DG 
Sbjct: 589 ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGG-SDGS 647

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                    P++V  L  +++ VV++           + ALT  G++Y +G GD  +LG
Sbjct: 648 K-------LPKIVDKL--LDQNVVKVFCGGQF-----SAALTAHGEVYTWGKGDHYRLG 692



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 149/332 (44%), Gaps = 36/332 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P YC ++  I + Q        +++S +G+VY     S  E +Y          PQ V  
Sbjct: 449 PFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYGS--ETQY----------PQSVYG 496

Query: 98  LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             +  VVQ A    G  + A L+ +G VY++  G+  RLGH    +  EP  ++  L + 
Sbjct: 497 FAD-DVVQIASHPDGKHYLA-LTTKGIVYSWGNGDGGRLGHGDSFSCDEPQ-VIEVLSDR 553

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  IA G  Y  A++   S   + + G G  G+LGHG   D   P ++       +  V
Sbjct: 554 TVTYIACGSTYSAAIS---STGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHV 610

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
              +G      V   G V +WG G YG LG G  +   +PK+V  L D   + V  G   
Sbjct: 611 ACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQF 670

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++  G+VY++G G+   LGH       GN   +V  P+LV  L+  N++V  +S+  
Sbjct: 671 SAALTAHGEVYTWGKGDHYRLGH-------GNEE-HVRFPKLVEGLR--NKKVRDLSVG- 719

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
               N H  A+TE   +Y +G  D  Q+   L
Sbjct: 720 ----NLHILAITEDQLVYGWGRNDACQIDPSL 747



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS +G    + WG++ R  LG         P P   +L  +  +Q+A G   L A+   
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPC-ESLSALRPIQLAGGEQTLFAVT-- 3943

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   VY+ G G  G+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3944 -ADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4002

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G  G LGHGN      PK+++AL   + + +A G + +  +S  G +Y++G G  
Sbjct: 4003 YSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRY 4062

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH   +D Q       L P +VT+L+    +V+ ++  +    +A T  +T+   ++
Sbjct: 4063 GRLGHGD-SDDQ-------LKPTVVTALQ--GYKVIDVACGSG---DAQTLCVTDDDNVW 4109

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4110 SWGDGDYGKLG 4120



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 24/212 (11%)

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            E  P V+IA   C    + C+  G+ +      +G K    ++       L   ++++  
Sbjct: 2855 EYYPCVEIAIKQCRNGGIDCKIHGLQI------IGYKKVFENQLATSVSFLASDWEVVQE 2908

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            Q       A  A+ V Q+  V  WG      LG        +P   + L+ +K IH+A G
Sbjct: 2909 Q-----MTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGG 2963

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T FVVS++G +Y+ G G +  LG      G  N   NV  P+ +  L Q   + V + 
Sbjct: 2964 SKTLFVVSQEGKLYACGEGTNGRLGL-----GDNN---NVGEPKPIPFLSQYIIKKVAVH 3015

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     H  ALT+ GK++++G G+ G+LG
Sbjct: 3016 SGGK-----HALALTQDGKVFSWGEGEDGKLG 3042



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L+G +++  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV +
Sbjct: 3210 PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--STMVNRKPSLVHN 3267

Query: 98   LKNIFVVQAAIGN 110
            L++  V + A G+
Sbjct: 3268 LEDAKVNRVACGS 3280


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 165/337 (48%), Gaps = 27/337 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V  +G+   G+  +G    +L  SP ++ +L+ + ++   
Sbjct: 15  RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLEGLEIISVI 72

Query: 108 IGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S     VY++ WG+  RLGH    +   P P+   L  + + QIA G  + 
Sbjct: 73  CGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIR-QLHGLKIKQIACGDSHC 131

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAAGA H A V
Sbjct: 132 LAVTMEGQ---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIK--MVAAGAEHTAAV 186

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+ +   VP+ V   +  K + VA G   T  VS  G +Y+
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYT 246

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH   AD         L P  + +L+     + QIS      W  HT A+T
Sbjct: 247 YGWSKYGQLGHGDYADH--------LIPHQLEALQ--GSFISQISGG----WR-HTMAVT 291

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
             GKLY +G    GQ+G   V +  +R +P +V + L
Sbjct: 292 SDGKLYGWGWNKFGQVG---VGDNVDRSSPVQVKLPL 325



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 18/271 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   R L G++I Q A G    + ++  GQV ++G++  G+   G     LV  PQ ++
Sbjct: 109 TPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 166

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP- 155
           + + + +   A G   TA ++ +G +Y + WG    LG     + + P  +     ++P 
Sbjct: 167 AFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKV-----SLPH 221

Query: 156 ---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
              +V +A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E  Q   + 
Sbjct: 222 GEKMVMVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFIS 278

Query: 213 PVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            +   +G W H   V  DG++  WGW ++G +G G+    S P  V+   + K I ++ G
Sbjct: 279 QI---SGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCG 335

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
              T  V+E  +V+S+G G +  LG+    D
Sbjct: 336 WRHTLAVTERQNVFSWGRGTNGQLGNGECTD 366



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ I   AAGA  T  +++ G++Y +G   +G    G
Sbjct: 147 QNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V       +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 207 DRKDRLV--PEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L+   + QI+ G+ + +A+    S   +Y  G    G++G G   D   P  
Sbjct: 265 IPHQLE-ALQGSFISQISGGWRHTMAVT---SDGKLYGWGWNKFGQVGVGDNVDRSSPV- 319

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +L   Q V++ +  W H   V +   V +WG G  G LG+G     +VP +++AL+
Sbjct: 320 --QVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALS 377


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL  +R IQ   G      ++  G++YA G  + G    G+ GT  V++P L+ES
Sbjct: 3205 PTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGR--LGIGGTDSVSTPTLLES 3262

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++ + + A+  G      LS EG VY++  G D +LGH        P  ++ +L    
Sbjct: 3263 IQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPR-VIESLRGKE 3321

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ IA G  +    AC  S   +Y+ G G  G+LGHG   D+  P++ +  +   +  V 
Sbjct: 3322 VIDIACGGAHS---ACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVA 3378

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP+ V AL+ +    V  G   +
Sbjct: 3379 CGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFS 3438

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V +L+   ++++ I+ T S
Sbjct: 3439 IALTKSGCVYTWGKGDYHRLGHGS--------DDHVRRPRKVAALQ--GKKIISIA-TGS 3487

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H  A ++ G++Y +G  D+GQLG
Sbjct: 3488 L----HCVACSDQGEVYTWGDNDEGQLG 3511



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+    L  ++++  A G+    +++  G+VYA G+ + G    G+  ++ V  P+ V 
Sbjct: 2229 TPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGR--LGLGSSQNVDIPKQVN 2286

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             L    V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  LL  L+  
Sbjct: 2287 GLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPR-LLEALKTK 2345

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +  P+L++   L+  + +
Sbjct: 2346 RIRDIACGSSHSAAVT---SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKA--LVGKRVI 2400

Query: 215  VVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             VA G+  A  +    +G V +WG G +G LG G  E  SVP  V+ LN    I +  G 
Sbjct: 2401 QVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGA 2460

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G V+++G G+   LGH           ++V  PQ+   LK   ++++ +++
Sbjct: 2461 QFSLALTKAGQVWTWGKGDYFRLGHGT--------DSHVRKPQVAEGLK--GKKIIHVAV 2510

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                    H  A+T++G+++A+G  D GQ G
Sbjct: 2511 GA-----LHCLAVTDTGQVFAWGDNDHGQQG 2536



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 29/302 (9%)

Query: 67   QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
            +V+ +G   KD  G    G +G+K+ T P L E L ++ VV  A G+    V++ EG+VY
Sbjct: 2207 KVFVWGLNDKDQLG----GPRGSKIKT-PVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVY 2261

Query: 124  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                G + RLG  +  N   P  + G L    V ++A       A+A    G  V+S G 
Sbjct: 2262 ACGEGTNGRLGLGSSQNVDIPKQVNG-LSQYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 2319

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  GKLGH SR + + PRL+E  +   ++   +A G+ H+A V   G + TWG G YG L
Sbjct: 2320 GDDGKLGHLSRMNCEKPRLLEALKTKRIRD--IACGSSHSAAVTSSGELYTWGLGEYGRL 2377

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            GHG+   +  PK+V+AL   + I VA G  D  T  ++++G VYS+G G+   LG     
Sbjct: 2378 GHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG--- 2434

Query: 302  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
               G+   +V  P  V  L    + V+QI           + ALT++G+++ +G GD  +
Sbjct: 2435 ---GSEGCSV--PHNVERLN--GQGVIQIECGAQF-----SLALTKAGQVWTWGKGDYFR 2482

Query: 362  LG 363
            LG
Sbjct: 2483 LG 2484



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 157/332 (47%), Gaps = 23/332 (6%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEY 81
            +G+  + G +   TP    S+Q + I + A  +G    + +S  G+VY++G+   G+  +
Sbjct: 3243 SGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGH 3302

Query: 82   GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
            G +       P+++ESL+   V+  A G   +A ++  G +YT+  G   RLGH    + 
Sbjct: 3303 GNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQ 3360

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            + P  +   L+   V+ +A G      L C      V+S G G  GKLG G     K P+
Sbjct: 3361 LRPK-MADALKGYRVIDVACGSGDSQTL-CISDDDNVWSWGDGDYGKLGRGGSDGCKVPQ 3418

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++    + +    V  G+  +  + + G V TWG G Y  LGHG+++    P+ V AL 
Sbjct: 3419 KVDALSSIGV--CKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQ 3476

Query: 262  DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
              K I +ATG       S+ G+VY++G  +   LG     DG  N    +  P++VT+L+
Sbjct: 3477 GKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG-----DGTTN---AIQRPRIVTALQ 3528

Query: 322  QVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
                      +TN    +AHT A + S  L+A
Sbjct: 3529 DKK-------ITNVACGSAHTVAWSTSKPLHA 3553



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 21/308 (6%)

Query: 32   REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
            ++VNG   Y      ++ +   +G    M ++  G+V+++G+   G+   G         
Sbjct: 2283 KQVNGLSQYV-----VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LGHLSRMNCEK 2335

Query: 92   PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            P+L+E+LK   +   A G+  +A ++  G +YT+  G   RLGH      + P  L+  L
Sbjct: 2336 PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPK-LVKAL 2394

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                V+Q+A G      L     GM VYS G G  GKLG G       P  +E+   LN 
Sbjct: 2395 VGKRVIQVACGSRDAQTLTLTDEGM-VYSWGDGDFGKLGRGGSEGCSVPHNVER---LNG 2450

Query: 212  QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            Q V+ +  GA  +  + + G+V TWG G Y  LGHG +     P+V + L   K IHVA 
Sbjct: 2451 QGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAV 2510

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G      V++ G V+++G  +     H    DG    +     P LV  L+ V    V  
Sbjct: 2511 GALHCLAVTDTGQVFAWGDND-----HGQQGDGSTTVNKK---PALVQGLEGVRITRVAC 2562

Query: 331  SLTNSIYW 338
              ++S  W
Sbjct: 2563 GSSHSTAW 2570



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 121/249 (48%), Gaps = 19/249 (7%)

Query: 117  SREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
            SRE +   F WG ND         + ++   L   L ++ VV  A G   L  +  +   
Sbjct: 2201 SREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGK- 2259

Query: 176  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
              VY+ G G  G+LG GS  +   P+ +       ++ V V +G  HA  +  DG+V +W
Sbjct: 2260 --VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317

Query: 236  GWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            G G  G LGH     CE  P++++AL   +   +A G   +  V+  G++Y++G GE   
Sbjct: 2318 GEGDDGKLGHLSRMNCEK-PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376

Query: 295  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
            LGH              L P+LV +L  V +RV+Q++  +    +A T  LT+ G +Y++
Sbjct: 2377 LGHGD--------STTQLRPKLVKAL--VGKRVIQVACGSR---DAQTLTLTDEGMVYSW 2423

Query: 355  GAGDKGQLG 363
            G GD G+LG
Sbjct: 2424 GDGDFGKLG 2432



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 26/258 (10%)

Query: 116  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            ++R    +T SWG    +   GH+        E   V+    + +L ++  +QI  G   
Sbjct: 3166 MNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQT 3225

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            L A+    +   +Y+ G G  G+LG G       P L+E  Q ++++ V V +G  HA  
Sbjct: 3226 LFAVT---ADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282

Query: 226  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
            +  +G V +WG G  G LGHGN      P+V+++L   + I +A G   +  V+  G++Y
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELY 3342

Query: 286  SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
            ++G G    LGH    D         L P++  +LK    RV+ ++  +    ++ T  +
Sbjct: 3343 TWGKGRYGRLGHGDSEDQ--------LRPKMADALK--GYRVIDVACGSG---DSQTLCI 3389

Query: 346  TESGKLYAFGAGDKGQLG 363
            ++   ++++G GD G+LG
Sbjct: 3390 SDDDNVWSWGDGDYGKLG 3407



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G  +I  A G   +  ++ +G++Y +GK  +G   +G    +L   P++ ++
Sbjct: 3311 PRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQL--RPKMADA 3368

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            LK   V+  A G  +  T  +S +  V+++  G+  +LG         P  +   L +I 
Sbjct: 3369 LKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKV-DALSSIG 3427

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V ++  G  + +AL    SG  VY+ G G   +LGHGS    + PR +   Q   +  + 
Sbjct: 3428 VCKVECGSQFSIALT--KSG-CVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKI--IS 3482

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V AL D K  +VA G   T
Sbjct: 3483 IATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHT 3542

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIAD 302
               S    +++    ++  + +N + +
Sbjct: 3543 VAWSTSKPLHAGRLPQTVPMEYNLLRE 3569



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQ 93
           TP     L+  + +  A G+  G+T+ ++D G +++FG   +G+    G  G KL   P+
Sbjct: 7   TPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL---PK 63

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVY---TFSWGNDA 131
           LV+ L+    V A  GN F+ +L++ G VY   TF+W + A
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSA 104



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK    G E    P     L G  +IQ   GA  ++ ++ AGQV+ +GK  +    +G  
Sbjct: 2429 GKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTD 2488

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
                V  PQ+ E LK   ++  A+G      ++  G+V  F+WG++           V  
Sbjct: 2489 SH--VRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQV--FAWGDNDHGQQGDGSTTVNK 2544

Query: 145  HP-LLGTLENIPVVQIAAGYCYLLALA 170
             P L+  LE + + ++A G  +  A A
Sbjct: 2545 KPALVQGLEGVRITRVACGSSHSTAWA 2571



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 5/52 (9%)

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           LTP+LV+ LK+  ++ V I+L ++   +  T A+T++G L++FG GD G+LG
Sbjct: 6   LTPKLVSGLKE--QKFVHIALGSN---DGQTLAVTDTGLLFSFGNGDYGKLG 52



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 58/156 (37%), Gaps = 33/156 (21%)

Query: 235  WGWGRYGCLGHGNEEC-------------ESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
            W W R  C+     E              E + KV Q   D + +     D+  F   +D
Sbjct: 3100 WAWFRRYCMAARVAESLENRTILPRVFGEEVMKKVTQISADWEELSKEHEDHKVFKREQD 3159

Query: 282  ----------GDVYSFGCGESASL---GHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
                       D ++   G S ++   GHN      G   A V  P  + SL  +  R +
Sbjct: 3160 EQILLWMNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSL--RPI 3217

Query: 329  QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            QI     +      FA+T  GKLYA G G  G+LGI
Sbjct: 3218 QI-----VGGEQTLFAVTADGKLYATGYGASGRLGI 3248



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 19/113 (16%)

Query: 247 NEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           N + +  PK+V  L + K +H+A G  D  T  V++ G ++SFG G+   LG    +DG 
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGG-SDG- 58

Query: 305 GNRHANVLTPQLVTSLKQV--------NERVVQISLTNSIYWNAHTFALTESG 349
                    P+LV  L+          N+  V ++ T ++Y    TFA T S 
Sbjct: 59  ------CKLPKLVDKLQGQHAVIACCGNQFSVILTKTGTVY-TCLTFAWTSSA 104


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 171/347 (49%), Gaps = 36/347 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF-----GEAEYGVQGTKLVTSP 92
           P    +L   R+   +AG   +++ +  G + +FG  S      G   +G Q T+++  P
Sbjct: 100 PKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRP 159

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            L  SL  + +V+ A G   + VLS +G V++F  G D  LGH  +   + P  L+ +L+
Sbjct: 160 VL--SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVP-KLISSLQ 216

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
              VV IAAG  + L +A   SG  VYS G G  G LGHG       P+ IE F  +   
Sbjct: 217 REKVVDIAAGSAHSLVVA--ESG-DVYSFGLGSEGALGHGDTDMSLVPKKIEHF--VQRP 271

Query: 213 PVVVAAGAWHAAVVG------QDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKA 265
            V VAAG  H+ V+       Q+GRV ++G   YG LG G+     + P  VQ   +  A
Sbjct: 272 AVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQV--EAAA 329

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           + +  G + + V++ DG VYSFG  +   LGH       GN   +   P L+ SL++  E
Sbjct: 330 VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGH-------GNDLRDNPEPTLIQSLER--E 380

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           R+V ++  N+      +  L+  G +++FG G  G+LG    +N T+
Sbjct: 381 RIVDVAAGNNF-----SLVLSAEGTVFSFGCGKNGRLGKGDESNATQ 422



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 132/309 (42%), Gaps = 67/309 (21%)

Query: 120 GRVYTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           G V +F   + +  G H +   P  VE       L    V  ++AG  + L +A +  G+
Sbjct: 78  GNVVSFGLADPSGHGDHVDKLRPKCVE------ALARERVRDVSAGLYHSL-VATKDGGL 130

Query: 177 AVYSVGCG---LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             +  G     + G+LGHG +  +  PR +    L  ++ V VAAGA H+ V+   G V 
Sbjct: 131 LSFGYGSANVVVDGRLGHGDQRTQMIPRPV--LSLSGVRIVKVAAGAHHSLVLSDQGNVF 188

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           ++G G  G LGHG++  + VPK++ +L   K + +A G   + VV+E GDVYSFG G   
Sbjct: 189 SFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEG 248

Query: 294 SLGHN------------------AIADGQGNRHANVLTP--------------------- 314
           +LGH                   A+    G  H+ VL+                      
Sbjct: 249 ALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQL 308

Query: 315 ------QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
                 +++ S  QV      + +    +   H+  LT  G++Y+FG    GQLG    +
Sbjct: 309 GLGHFSRMIASPAQVQVEAAAVEIEAGAH---HSLVLTNDGRVYSFGLAQHGQLG----H 361

Query: 369 NQTERGNPE 377
               R NPE
Sbjct: 362 GNDLRDNPE 370



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 30/237 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P    SLQ  +++  AAG+  +++++++G VY+FG  S G   +G     LV  P+ +E
Sbjct: 208 VPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLV--PKKIE 265

Query: 97  SLKNIFVVQAAIGNFFTAVLSR------EGRVYTF---SWGNDARLGHHTEPNDVEPHPL 147
                  V+ A G   + VLS+      EGRV +F   S+G    LGH +         +
Sbjct: 266 HFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLG-LGHFSR--------M 316

Query: 148 LGTLENIPV----VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRL 202
           + +   + V    V+I AG  + L L        VYS G    G+LGHG+   D   P L
Sbjct: 317 IASPAQVQVEAAAVEIEAGAHHSLVLTNDGR---VYSFGLAQHGQLGHGNDLRDNPEPTL 373

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           I+  +   +  V VAAG   + V+  +G V ++G G+ G LG G+E   + P VV A
Sbjct: 374 IQSLERERI--VDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           ++  AGA  ++++++ G+VY+FG    G+  +G    +    P L++SL+   +V  A G
Sbjct: 330 VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHG-NDLRDNPEPTLIQSLERERIVDVAAG 388

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           N F+ VLS EG V++F  G + RLG   E N  +P  +      +    I+AGY + L +
Sbjct: 389 NNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSA--ISAGYSHSLVV 446


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 163/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4038

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4097

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4098 VVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L D+  + V  G   +
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFS 4214

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4263

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4264 L----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           +SL  +NI  + A         LS  G V+++  G+  RLGH       EP     L G 
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E L N+ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P+LI  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+++++  G+D +LGH +
Sbjct: 3029 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFS 3087

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3088 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3143

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3144 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3202 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3253

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3254 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3294



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3018

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG++ +WG G
Sbjct: 3019 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG 3078

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3137

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3138 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3185

Query: 359  KGQLG 363
             G+LG
Sbjct: 3186 FGKLG 3190



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG ++ +GK  +G   +G    +L   P+LVE+
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEA 4144

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L ++ 
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTDLG 4203

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4204 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4258

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4259 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318

Query: 276  FVVS 279
               S
Sbjct: 4319 LAWS 4322



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4125

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4172

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3263 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3317

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3318 VACGSSHS 3325



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L NL  V +A       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 268 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 323
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+L+++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 550

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ ++  GQVY +GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            LK   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 156/319 (48%), Gaps = 26/319 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++I  +AGA  ++ +     V ++G+   G+  +G    +   +P  + +L  + ++   
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR--PTPTQLSTLDGLDIISIT 76

Query: 108 IGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G   T   S E R  VY++ WG+  RLGH    +   P P+   L ++ + QIA G  +
Sbjct: 77  CGADHTTSYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK-ALHSLKIRQIACGDSH 134

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VAAGA H A 
Sbjct: 135 CLAVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIK--MVAAGAEHTAA 189

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+     VP+ V  +N  K I VA G   T  VS  G +Y
Sbjct: 190 VTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLY 249

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH    D         LTP  V +L     R   IS+ +  +   HT AL
Sbjct: 250 TYGWSKYGQLGHGDFED--------HLTPHKVEAL-----RDSYISMISGGW--RHTMAL 294

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T  G LY +G    GQ+G+
Sbjct: 295 TSDGNLYGWGWNKFGQVGV 313



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 146/324 (45%), Gaps = 15/324 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++L  ++I Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 113 TPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 170

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + + +   A G   TA ++ +G +Y + WG    LG     + + P  +   +    +
Sbjct: 171 AFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKV-SLVNGDKM 229

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + +A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E    L    + +
Sbjct: 230 IMVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEA---LRDSYISM 283

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDY 273
            +G W H   +  DG +  WGW ++G +G G+  + C  V            + ++ G  
Sbjct: 284 ISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWR 343

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++E  +V+S+G G +  LGH    D    +   VL+    +   Q+    V  SL 
Sbjct: 344 HTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLSAD-GSGGHQIEASTVDPSLG 402

Query: 334 NSIYWNAHTFALT--ESGKLYAFG 355
            S    +  +A+   ESG+  + G
Sbjct: 403 KSWVSPSDRYAIVPDESGQAVSVG 426



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 6/239 (2%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ I   AAGA  T  +++ G++Y +G   +G    G
Sbjct: 151 QNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 210

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V  +    ++  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 211 DRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 268

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L +  +  I+ G+ + +AL    +   +Y  G    G++G G   D   P  
Sbjct: 269 TPHKVE-ALRDSYISMISGGWRHTMALTSDGN---LYGWGWNKFGQVGVGDNIDHCSPVQ 324

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           ++         V ++ G  H   + +   V +WG G  G LGHG     ++PK+++ L+
Sbjct: 325 VKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLS 383


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 156/325 (48%), Gaps = 17/325 (5%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI+Q +A       ++++GQVY FG +       G  G + ++ P LV +L+     Q +
Sbjct: 161 RIVQISANFNHAAFVTESGQVYTFGDNVSCCCGVGESG-QPISKPTLVTTLERNPCQQVS 219

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G  +T  L+R G ++++   +  +LG         P  +    E+ PV Q++AG C+ L
Sbjct: 220 TGQGYTVALTRNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTL 279

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+    SG  ++S G G    LGH     E  P+ +E     +L  +  AAG  H+A + 
Sbjct: 280 AVT--KSGQ-LFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAID 336

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V TWG G  G LGHG    +  P VV AL   +A+ V      TFV+ ++G V+SF
Sbjct: 337 SLGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSF 396

Query: 288 GCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           G     SLG       QG   ++ V++PQ +  L     +V  I+    +Y   HT  +T
Sbjct: 397 GWMAYHSLGV------QGKSASDTVVSPQSL-DLALHGHKVSTIAA--GMY---HTLVIT 444

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQT 371
             G ++ FG  D  QLG   V N+T
Sbjct: 445 RKGAIFGFGDNDSSQLGPVSVTNET 469



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 157/341 (46%), Gaps = 28/341 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           R +  AAG   T+L+   G++YA G   S       V   +   S  L  +   I  + A
Sbjct: 108 RDVLVAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISA 167

Query: 107 AIGNF-FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
              NF   A ++  G+VYTF        G       +    L+ TLE  P  Q++ G  Y
Sbjct: 168 ---NFNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGY 224

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 224
            +AL        ++S GC   G+LG G+  ++  PR IE+F   N  PV  V+AG  H  
Sbjct: 225 TVALT---RNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESN--PVAQVSAGICHTL 279

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDG 282
            V + G++ +WG+G   CLGH +   E  PK V+    +D+  I  A GD  +  +   G
Sbjct: 280 AVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLG 339

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            VY++G G   +LGH A  D +        TP +V +LK  + R VQ+     +     T
Sbjct: 340 YVYTWGKGYCGALGHGAGTDQR--------TPLVVAALK--STRAVQV-----VARRRKT 384

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           F L ++G +++FG      LG++  +      +P+ +D+ L
Sbjct: 385 FVLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDLAL 425



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG---TKLVTSPQ 93
           TPL   +L+  R +Q  A   +T ++ D G V++FG  ++     GVQG   +  V SPQ
Sbjct: 362 TPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAY--HSLGVQGKSASDTVVSPQ 419

Query: 94  LVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
            ++ +L    V   A G + T V++R+G ++ F   + ++LG
Sbjct: 420 SLDLALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDSSQLG 461


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 159/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C +L  +R +Q   G      I+  G+V A G  +      G+ GT  V +P L+ES
Sbjct: 3960 PVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGYGA--GGRLGIGGTDSVATPTLIES 4017

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + AI  G      LS EG VY++  G D +LGH        P  +  +L    
Sbjct: 4018 IQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAI-ESLRGKE 4076

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  S   +YS G G  G+LGHG   D+  P+L++  +   +  V 
Sbjct: 4077 VVDIAAGGAHS---ACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVA 4133

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + AL  +  I V  G   +
Sbjct: 4134 CGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFS 4193

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH            ++  P+  T+L+   +++V I+    
Sbjct: 4194 VALTKSGAVYTWGKGDYHRLGHGT--------EDHIRRPRRCTTLQ--GKKIVSIACG-- 4241

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
               + H  A T++G++Y +G  D+GQLG
Sbjct: 4242 ---SLHCVACTDAGEVYTWGDNDEGQLG 4266



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 22/329 (6%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP    +L  ++ +Q   G+     ++  G+++A G+ + G    G+     V  P+ + 
Sbjct: 2937 TPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGN-VPQPRQLT 2995

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL    + + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L + 
Sbjct: 2996 SLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALRSK 3054

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    S   +Y+ G G  G+LGHG  T +  P+L++  +   +  V
Sbjct: 3055 RVRDIACGGSHSAAII---SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQV 3111

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             + +       +   G V +WG G +G LG G  E  SVP  ++ LN V    +  G   
Sbjct: 3112 ALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQF 3171

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            +  +++ G V+++G G+   LGH           A+V  PQLV +LK   ++V  +++  
Sbjct: 3172 SLALTKSGQVWTWGKGDYFRLGHGT--------DAHVRKPQLVETLK--GKKVTHVAVG- 3220

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  H  ++ ++G++YA+G  D GQ G
Sbjct: 3221 ----ALHCLSVLDNGQVYAWGDNDHGQQG 3245



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 16/293 (5%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    M ++  G+V+++G+   G+   G         P+L+E+L++  V   
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALRSKRVRDI 3059

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G   +A +   G +YT+  G   RLGH      + P  L+  LE   V+Q+A G    
Sbjct: 3060 ACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPK-LVKALEGQRVIQVALGSRDA 3118

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA   SG  VYS G G  GKLG G       P  IE+   + +    +  GA  +  +
Sbjct: 3119 QTLALTDSG-TVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV--CQIECGAQFSLAL 3175

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G+V TWG G Y  LGHG +     P++V+ L   K  HVA G      V ++G VY+
Sbjct: 3176 TKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYA 3235

Query: 287  FGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +            QGN    V   P LV  L+      V    ++SI W
Sbjct: 3236 WGDNDHGQ---------QGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAW 3279



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 33/317 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           IIQ A  +   +++   G+VY     +  ++ + +             +L +I +++ A 
Sbjct: 436 IIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEIS------------TLADIEIIKLAA 483

Query: 109 GN--FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            +       L+ EG VY++  G+  +LGH        P  L+  L    VV +A G  + 
Sbjct: 484 HSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPM-LINELHGKSVVNVACGSHHS 542

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            A+    SG  +++ G G  G+LG GS  D   P L+     + +  V   +G      +
Sbjct: 543 AAITA--SG-ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIAL 599

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G V +WG G YG LG G  E    PK+V  L  +    V  G   +  V ++G V++
Sbjct: 600 ADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFT 659

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G GE   LGH      +  R    L  + VTSL                  + H  A T
Sbjct: 660 WGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLS---------------LGSHHCLATT 704

Query: 347 ESGKLYAFGAGDKGQLG 363
           E G+L ++G  DKGQLG
Sbjct: 705 EEGELLSWGRNDKGQLG 721



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 10/249 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G  ++  AAG   +  I+  G++Y++GK  +G   +G   ++  T P+LV++
Sbjct: 4066 PRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHG--DSEDQTKPKLVDA 4123

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            LK   V   A G  +  T  ++ +  V+++  G+  +LG         P  +   L+ + 
Sbjct: 4124 LKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKI-DALQGLG 4182

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+++  G  + +AL    SG AVY+ G G   +LGHG+    + PR     Q    + V 
Sbjct: 4183 VIKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQ--GKKIVS 4237

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   +
Sbjct: 4238 IACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHS 4297

Query: 276  FVVSEDGDV 284
               S +  V
Sbjct: 4298 LAWSTNKPV 4306



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+    L G  ++  A G+  +  I+ +G+++ +G+ SFG    G+  T+ + +P LV 
Sbjct: 520 SPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGR--LGLGSTEDILTPALVS 577

Query: 97  SLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            L  + VV  A G  +  T  L+  G VY++  G   +LG         P  L+  L+ +
Sbjct: 578 GLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPK-LVDKLQGL 636

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V ++  G  Y  A+ C+    AV++ G G G KLGHG+    + PR +E   L      
Sbjct: 637 DVTRVYCGPQYSAAV-CK--NGAVFTWGNGEGYKLGHGTEEHVRFPRQVET--LAGKHVT 691

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            ++ G+ H     ++G + +WG    G LG G+   ++ P    +L     I +      
Sbjct: 692 SLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQ 751

Query: 275 TFVVS 279
           TF  S
Sbjct: 752 TFAWS 756



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 20/175 (11%)

Query: 208  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KA 265
            L  ++PV +  G      +  DG+VC  G+G  G LG G  +  + P +++++  V  + 
Sbjct: 3966 LATMRPVQLIGGEQTLFSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRK 4025

Query: 266  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
            + + +G      +S +G+VYS+G GE   LGH       GNR +    P+ + SL+   +
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWGEGEDGKLGH-------GNR-SPCDRPRAIESLR--GK 4075

Query: 326  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
             VV I+        AH+  +T +G+LY++G G  G+LG     +QT+   P+ VD
Sbjct: 4076 EVVDIAAGG-----AHSACITSTGELYSWGKGRYGRLGHGDSEDQTK---PKLVD 4122



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK    G E    P     L G+ + Q   GA  ++ ++ +GQV+ +GK  +    +G  
Sbjct: 3138 GKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTD 3197

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
                V  PQLVE+LK   V   A+G      +   G+VY +   +  + G+ T   + +P
Sbjct: 3198 AH--VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKP 3255

Query: 145  HPLLGTLENIPVVQIAAGYCYLLA 168
              L+  LE   + ++A G  + +A
Sbjct: 3256 -ALVQGLEGCKISRVACGSSHSIA 3278



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 19/111 (17%)

Query: 257 VQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +  L D++ I +A    G +   + SE GDVYS+G G+   LGH               +
Sbjct: 470 ISTLADIEIIKLAAHSEGSHCLALTSE-GDVYSWGNGDFGKLGHGDTVTCD--------S 520

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           P L+  L          S+ N    + H+ A+T SG+L+ +G G  G+LG+
Sbjct: 521 PMLINELHGK-------SVVNVACGSHHSAAITASGELFTWGRGSFGRLGL 564


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 157/317 (49%), Gaps = 24/317 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L    +V   
Sbjct: 9   RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSVT 66

Query: 108 IG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G +  TA       VY++ WG+  RLGH    + + P P+   L  + + QIA G  + 
Sbjct: 67  CGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK-ALHGLKIRQIACGDSHC 125

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G+  D   P+ I+ F+ ++++  +VAAGA H A V
Sbjct: 126 LAVTMEGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIK--MVAAGAEHTAAV 180

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH    D         L P  + +L+  N  + QIS      W  HT ALT
Sbjct: 241 YGWSKYGQLGHGDFED--------RLVPHRLEALRGDN--ISQISGG----WR-HTMALT 285

Query: 347 ESGKLYAFGAGDKGQLG 363
             GKLY +G    GQ+G
Sbjct: 286 TDGKLYGWGWNKFGQVG 302



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 10/267 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++L G++I Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 160

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G ++ + WG    LG     + + P  +  +++   +
Sbjct: 161 AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKV-SSVDGDKM 219

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E  +  N+  +  
Sbjct: 220 VMVACGWRHTISVS---SLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQI-- 274

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+      P  ++   D K I ++ G   T
Sbjct: 275 -SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHT 333

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIAD 302
             V++  +V+S+G G +  LGH    D
Sbjct: 334 LAVTDKQNVFSWGRGTNGQLGHGESVD 360



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 26/226 (11%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+   +V
Sbjct: 10  VLFISAGASHSVALL---SGNIVCSWGRGEDGQLGHGDAEDRLSP---TQLSALDGHEIV 63

Query: 216 -VAAGAWHAAVVG-QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V  GA H          V +WGWG +G LGHGN      PK ++AL+ +K   +A GD 
Sbjct: 64  SVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDS 123

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
               V+ +G+V S+G  ++  LG     D         L PQ + + + ++ ++V     
Sbjct: 124 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQAFEGISIKMVAAGA- 174

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                  HT A+TE G+L+ +G G  G LG+    ++ +R  P++V
Sbjct: 175 ------EHTAAVTEDGELFGWGWGRYGNLGL---GDRNDRLVPQKV 211



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI I   AAGA  T  +++ G+++ +G   +G    G
Sbjct: 141 QNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 200

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  PQ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 201 DRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRL 258

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L    + QI+ G+ + +AL        +Y  G    G++G G   D   P  
Sbjct: 259 VPHRLE-ALRGDNISQISGGWRHTMALTTDGK---LYGWGWNKFGQVGAGDNIDHCSPI- 313

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +    Q V+  +  W H   V     V +WG G  G LGHG     + P +++AL+
Sbjct: 314 --QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 371


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 22/329 (6%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            T   C +L  +R +Q   G      ++  G+VYA G  +      G+ GT+ V++P L+E
Sbjct: 3642 TATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGA--GGRLGIGGTESVSTPTLIE 3699

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +L+++ V Q A+  G      L+  G V+++  G+D +LGH ++     P  L+ +L + 
Sbjct: 3700 TLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPK-LIESLRDK 3758

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             VV +A G  +    AC  +   +Y+ G G  G+LGHG   D+  P+ +E+    N+  V
Sbjct: 3759 HVVSVACGGAHS---ACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDV 3815

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
               +G      V +DG V +WG G YG LG G  +    P+ + +L +   I V  G   
Sbjct: 3816 ACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQF 3875

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            +  ++  G VY++G G+   LGH +          +V  PQ V    Q  +RV+Q+++  
Sbjct: 3876 SVALTAAGVVYTWGKGDYHRLGHGS--------EDHVRRPQAVQGALQ-GKRVIQVAVG- 3925

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H  A T+SG+++ +G  D+GQLG
Sbjct: 3926 ----SLHCVACTDSGEVFTWGDNDEGQLG 3950



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 38/365 (10%)

Query: 12   SPILRPDI--------INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLIS 63
            SP +R +I        +N+++    L G ++   P +   +  ++ +  A G+    ++S
Sbjct: 2643 SPSMRENIECKVFVWGLNDKDQLGGLKGSKIK-EPKFSEVISNLKPMNIAGGSKSLFIVS 2701

Query: 64   DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGR 121
              G+V+A G+ + G    G+  +  V  P+ +  L   F+ + A+  G      L+ +GR
Sbjct: 2702 HDGKVFACGEGTNGR--LGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGR 2759

Query: 122  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
            V+++  G D +LGH  + +   P  L+ +L+   +  +A G  +  A+    S   +Y+ 
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPK-LVESLKCKRIRDVACGSSHSAAVT---SSGELYTW 2815

Query: 182  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR--VCTWGWG 238
            G G  G+LGHG    +  P+   Q + L+ + VV VA G+  A  +    R  V +WG G
Sbjct: 2816 GSGEYGRLGHGDNVPQLKPK---QVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDG 2872

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             +G LG G  +  S+P+ V+ LN  + I V  G   +  +S++G V+++G G+   LGH 
Sbjct: 2873 DFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHG 2932

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            +         ++V  PQ+V  L   N  V+Q+S+        H  A+T+ G++YA+G  D
Sbjct: 2933 S--------DSHVRWPQVVEELADKN--VIQVSVGA-----LHCIAVTDRGEVYAWGDND 2977

Query: 359  KGQLG 363
             GQ G
Sbjct: 2978 HGQQG 2982



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 18/304 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            PL   S   I+ +   +G    + ++  G+V+++G+   G+  +G + +     P+LVES
Sbjct: 2730 PLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKIS--YDRPKLVES 2787

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            LK   +   A G+  +A ++  G +YT+  G   RLGH      ++P  +   L +  VV
Sbjct: 2788 LKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRA-LSHERVV 2846

Query: 158  QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 216
            Q+A G      LA       VYS G G  GKLG G       P+ +E    LN Q V+ V
Sbjct: 2847 QVACGSRDAQTLALTERHW-VYSWGDGDFGKLGKGGSDGSSLPQNVET---LNSQQVIQV 2902

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
              GA  +  + ++G+V TWG G Y  LGHG++     P+VV+ L D   I V+ G     
Sbjct: 2903 ECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCI 2962

Query: 277  VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
             V++ G+VY++G  +           G GN   N   P +V  L+ +    V    ++S+
Sbjct: 2963 AVTDRGEVYAWGDNDHGQ-------QGNGNTTVN-RKPAIVRGLEAITN--VACGSSHSV 3012

Query: 337  YWNA 340
             W++
Sbjct: 3013 AWSS 3016



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 9/240 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+   ++  A G   +  I+ +G++Y +GK  +G   +G    +L   P+ VE 
Sbjct: 3749 PKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL--KPKKVEE 3806

Query: 98   L--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L   N+  V    G+  T  +SR+G V+++  G+  +LG         P  +  +L+N  
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKI-DSLQNAG 3865

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+++  G  + +AL    +   VY+ G G   +LGHGS    + P+ + Q  L   + + 
Sbjct: 3866 VIKVECGSQFSVALT---AAGVVYTWGKGDYHRLGHGSEDHVRRPQAV-QGALQGKRVIQ 3921

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            VA G+ H       G V TWG    G LG G+      PK+V +L   K   VA G   T
Sbjct: 3922 VAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHT 3981



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 125/311 (40%), Gaps = 80/311 (25%)

Query: 116  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            ++R    +T SWG    +   GH+        E   V+   +   L  +  VQI  G   
Sbjct: 3604 VNRSPDEWTLSWGGSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQT 3663

Query: 166  LLALACQPSGMA------------------------------VYSVGCGLGGK------- 188
            L AL       A                              V  V    GGK       
Sbjct: 3664 LFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTS 3723

Query: 189  --------------LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
                          LGHGS+   + P+LIE   L +   V VA G  H+A +   G + T
Sbjct: 3724 SGDVFSWGEGDDGKLGHGSKALCERPKLIE--SLRDKHVVSVACGGAHSACITASGELYT 3781

Query: 235  WGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            WG GRYG LGHG+ E +  PK V+ L  ++V  +   +GD  T  VS DG V+S+G G+ 
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY 3841

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LG    +DG          PQ + SL+  N  V+++   +       + ALT +G +Y
Sbjct: 3842 GKLGRGG-SDG-------CKFPQKIDSLQ--NAGVIKVECGSQF-----SVALTAAGVVY 3886

Query: 353  AFGAGDKGQLG 363
             +G GD  +LG
Sbjct: 3887 TWGKGDYHRLG 3897


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4038

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4097

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4098 VVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  V  + V  G   +
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFS 4214

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4263

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4264 L----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D  G              PQLV
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILG--------------PQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           +SL  +NI  + A         L+  G V+++  G+  RLGH       EP     L G 
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V+ 
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   E+V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GEKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
                +  + H  ALTE  ++Y++G+ D+ Q
Sbjct: 716 -----VAGSTHCLALTEDSEVYSWGSNDQCQ 741



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3029 GLGL-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3087

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG  T +
Sbjct: 3088 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNTTQ 3143

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3144 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3202 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3253

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3254 VVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3294



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 152/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E L ++ V Q A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDI-LGPQ----------LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++S  +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--IVKVSCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3018

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH- 3137

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3138 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3185

Query: 359  KGQLG 363
             G+LG
Sbjct: 3186 FGKLG 3190



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG +Y +GK  +G   +G    +L   P+LVE+
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEA 4144

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGVG 4203

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4204 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4258

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4259 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318

Query: 276  FVVS 279
               S
Sbjct: 4319 LAWS 4322



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD+Y++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 4125

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4172

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3263 IIHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3317

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3318 VACGSSHS 3325



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++ + G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+    G+     L+ +  VY  SWG++ +  H       +P P  L  L++  
Sbjct: 706 GLQGEKVIDVVAGSTHCLALTEDSEVY--SWGSNDQCQHFDTLRITKPDPTALPGLDSKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 17/122 (13%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ+L     + +A  +  +    ++  G+V+S+GCG+   LGH      +       
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591

Query: 370 QT 371
           QT
Sbjct: 592 QT 593


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 2195 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 2252

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++FV + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 2253 IQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VVESLRGIE 2311

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC      +YS G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 2312 VVDIAAGGAHS---ACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 2368

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 2369 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 2428

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 2429 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 2477

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 2478 L----HCVCCTEDGEVYTWGDNDEGQLG 2501



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDTLG--------------PQLV 192

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  V A         L+  G V+++  G+  RLGH       EP     L G 
Sbjct: 193 QGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 252

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 253 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 309

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 310 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 369

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++VV +
Sbjct: 370 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDV 419

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 420 AAGST-----HCLALTEDSEVHSWGSNDQCQ 445



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 147/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVY  ++ +D  LG            L+
Sbjct: 144 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSDT-LGPQ----------LV 192

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V++AA   G+ Y LALA       V+S GCG GG+LGHG     + P++I  
Sbjct: 193 QGLASRNIVKVAAHSDGHHY-LALAATGE---VFSWGCGDGGRLGHGDTVPLEEPKMISA 248

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 249 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 308

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 309 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 360

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 361 DLD--IVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 395



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 28/301 (9%)

Query: 67   QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
            +V+ +G   KD  G    G++G+K +  P   E+L  + VVQ A G+     ++ EG+VY
Sbjct: 1150 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 1204

Query: 124  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                  + RLG       V     +  L N  V ++A       A+A    G  V+S G 
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 1263

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  GKLGH SR +   PRLIE  +   ++ +  A G+ H+A +   G + TWG G YG L
Sbjct: 1264 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDI--ACGSSHSAAITSSGELYTWGLGEYGRL 1321

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            GHG+   +  PK+V+ L   + I VA G  D  T  ++++G V+S+G G+   LG     
Sbjct: 1322 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--- 1378

Query: 302  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
               G+   NV  PQ +  L    + V QI           + ALT+SG ++ +G GD G+
Sbjct: 1379 ---GSEGCNV--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWGRGDFGE 1426

Query: 362  L 362
            L
Sbjct: 1427 L 1427



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 142/280 (50%), Gaps = 12/280 (4%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 1156 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 1214

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 1215 GLGIS-SGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 1273

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 1274 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 1329

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  +VP+
Sbjct: 1330 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQ 1387

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
             ++ LN      +  G   +  +++ G V+++G G+   L
Sbjct: 1388 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 1148 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 1204

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 1205 ACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1264

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 1265 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 1323

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 1324 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 1371

Query: 359  KGQLG 363
             G+LG
Sbjct: 1372 FGKLG 1376



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  I+ AG +Y++GK  +G   +G 
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD 2346

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 2347 SEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 2404

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 2405 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 2460

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 2461 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 2518

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 2519 GKKINRVACGSAHTLAWS 2536



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 2222

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                 +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 2223 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEV 2279

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+VV++L  ++ + +A G   +  ++  GD+YS+G G  
Sbjct: 2280 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRY 2339

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 2340 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 2386

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 2387 SWGDGDYGKLG 2397



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 352 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 409

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   VV  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 410 GLQGKKVVDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRITKPQPSALPGLDTKH 467

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 468 IVGIACG 474



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ L     + VA  +  +    ++  G+V+S+GCG+   LGH             +
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVP--------L 240

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 241 EEPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 295

Query: 370 QT 371
           QT
Sbjct: 296 QT 297


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3730 PTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3787

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3788 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3846

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 3847 VVDIAAGGAHS---ACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 3903

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3904 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3963

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3964 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4012

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4013 L----HCVCCTEDGEVYTWGDNDEGQLG 4036



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2718 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2776

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+++++  G+D +LGH +
Sbjct: 2777 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFS 2835

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 2836 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 2891

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2892 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2949

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 2950 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3001

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3002 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3042



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG +Y +GK  +G   +G    +L   P+LVE+
Sbjct: 3836 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL--KPKLVEA 3893

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 3894 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 3952

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 3953 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4007

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4008 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4067

Query: 276  FVVS 279
               S
Sbjct: 4068 LAWS 4071



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2710 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2766

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG++ +WG G
Sbjct: 2767 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG 2826

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2827 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 2885

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2886 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2933

Query: 359  KGQLG 363
             G+LG
Sbjct: 2934 FGKLG 2938



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  +Q+  G   L A+   
Sbjct: 3699 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPIQLIGGEQTLFAVT-- 3755

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3756 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3814

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD+Y++G G  
Sbjct: 3815 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 3874

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 3875 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 3921

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3922 SWGDGDYGKLG 3932



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG+   G  G++    PQ +
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNI 2951

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 2952 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3010

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3011 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3065

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3066 VACGSSHS 3073



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 22/140 (15%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKD-----------------SFGE 78
           P+ C  L  + I Q A    R +++S  G+VY  A+  D                 S+G+
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGD 416

Query: 79  AEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
            +YG  G   +    +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH
Sbjct: 417 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 476

Query: 136 HTEPNDVEPHPLLGTLENIP 155
            TE +   P  L G    +P
Sbjct: 477 GTEEHVRYPKLLEGLQATLP 496



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 34/173 (19%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ + Q A       +LSR GRVY  ++ +D  +G              
Sbjct: 354 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVG-------------- 399

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
                     + A +  +           V+S G G  GKLG G     K P+LIE+ Q 
Sbjct: 400 ----------VVAVFSLIFG--------QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 441

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           L++  V V  G+  +  + +DG+V +WG G    LGHG EE    PK+++ L 
Sbjct: 442 LDV--VKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 41/68 (60%)

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G+V +WG G YG LG G  +    PK+++ L D+  + V  G   +  +++DG VYS+G 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 290 GESASLGH 297
           G++  LGH
Sbjct: 469 GDNQRLGH 476


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 162/333 (48%), Gaps = 23/333 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+ C +L  +R IQ   G      ++  G+VYA G  +      G+ GT  V+ P L+ES
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGA--GGRLGIGGTDSVSCPTLLES 662

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           L+++F+ +  +  G      LS EG VY++  G+D +LGH  + +   P  ++ +L    
Sbjct: 663 LQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPR-VIESLRGKE 721

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +A G  +    AC  +   +Y+ G G  G+LGHG   D+  P+ +E      ++ V 
Sbjct: 722 VVDVACGGAHS---ACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVA 778

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      V  D  V +WG G YG LG G  +   VP  V  L  +  I V  G   +
Sbjct: 779 CGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFS 838

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             ++  G VY++G G+   LGH            +V  P+ V +L+   ++V+ I++   
Sbjct: 839 VALTASGSVYTWGKGDYHRLGHGT--------DDHVRRPKRVAALQ--GKKVICIAVG-- 886

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
              + H  A T++G++Y +G  D+GQLG   VN
Sbjct: 887 ---SLHCVACTDTGEVYTWGDNDEGQLGDGTVN 916



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 155/303 (51%), Gaps = 27/303 (8%)

Query: 65  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
           +G +  +G +  G+   GV+G K V  P   E+L  +  +Q   G      ++ +G+VY 
Sbjct: 580 SGTILGWGHNHRGQLG-GVEGAK-VKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYA 637

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPV--VQIAAGYCYLLALACQPSGMAVYSVG 182
             +G   RLG     + V    LL +L+++ +  V + +G  + LAL+ +     VYS G
Sbjct: 638 TGYGAGGRLGIGGT-DSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGE---VYSWG 693

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
            G  GKLGHG+++  + PR+IE   L   + V VA G  H+A +   G + TWG GRYG 
Sbjct: 694 EGDDGKLGHGNKSSCERPRVIE--SLRGKEVVDVACGGAHSACITASGELYTWGKGRYGR 751

Query: 243 LGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           LGHG+ + +  PK V+AL+   V+ +   +GD  T  V++D  V+S+G G+   LG    
Sbjct: 752 LGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG- 810

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
           +DG          P  V  L+ +   V+++   +       + ALT SG +Y +G GD  
Sbjct: 811 SDG-------CKVPLRVDLLQGMG--VIRVECGSQF-----SVALTASGSVYTWGKGDYH 856

Query: 361 QLG 363
           +LG
Sbjct: 857 RLG 859



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 28/259 (10%)

Query: 116 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 164
           ++R    +T SWG    +      H  +   VE      P P    L  +  +Q+  G  
Sbjct: 566 VNRRPEDWTLSWGWSGTILGWGHNHRGQLGGVEGAKVKLPMP-CEALSALRPIQVVGGEQ 624

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ VVV +G  H  
Sbjct: 625 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCL 681

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            +  +G V +WG G  G LGHGN+     P+V+++L   + + VA G   +  ++  G++
Sbjct: 682 ALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGEL 741

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           Y++G G    LGH   +D Q       L P+ V +L     R V          +A T  
Sbjct: 742 YTWGKGRYGRLGHGD-SDDQ-------LRPKKVEALSGWRVRCVACGSG-----DAQTLC 788

Query: 345 LTESGKLYAFGAGDKGQLG 363
           +T+   ++++G GD G+LG
Sbjct: 789 VTDDDCVWSWGDGDYGKLG 807



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+G  ++  A G   +  I+ +G++Y +GK  +G   +G    +L   P+ VE+
Sbjct: 711 PRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQL--RPKKVEA 768

Query: 98  LK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
           L    +  V    G+  T  ++ +  V+++  G+  +LG     +D    PL +  L+ +
Sbjct: 769 LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG--SDGCKVPLRVDLLQGM 826

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V+++  G  + +AL    S   VY+ G G   +LGHG+    + P+ +   Q    + +
Sbjct: 827 GVIRVECGSQFSVALTASGS---VYTWGKGDYHRLGHGTDDHVRRPKRVAALQ--GKKVI 881

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A G+ H       G V TWG    G LG G       P++V AL   K   V+ G   
Sbjct: 882 CIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAH 941

Query: 275 TFVVSEDGDVYSFGCG 290
           T   S      +  CG
Sbjct: 942 TVAWSTCNPSTAGACG 957


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           +SL  +NI  + A         LS  G V+++  G+  RLGH       EP     L G 
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E L N+ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3029 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3087

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3088 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3143

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3144 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3202 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3253

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3254 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3294



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 24/329 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4038

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4097

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +++ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4098 VVDVAAGGAHS---ACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4214

Query: 276  FVVSEDGDVYSFGC-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
              +++ G VY++    +   LGH +          +V  P+ V  L+   ++V+ I+ T 
Sbjct: 4215 VALTKSGAVYTWQVFRDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TG 4263

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            S+    H    TE G++Y +G  D+GQLG
Sbjct: 4264 SL----HCVCCTEDGEVYTWGDNDEGQLG 4288



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3018

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3019 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3137

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3138 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3185

Query: 359  KGQLG 363
             G+LG
Sbjct: 3186 FGKLG 3190



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 11/245 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG ++ +GK  +G   +G    +L   P+LVE+
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEA 4144

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 4203

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLG-GKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV++  G  + +AL    SG AVY+        +LGHGS    + PR ++  Q    + +
Sbjct: 4204 VVKVECGSQFSVALT--KSG-AVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQ--GKKVI 4258

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   
Sbjct: 4259 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAH 4318

Query: 275  TFVVS 279
            T   S
Sbjct: 4319 TLAWS 4323



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  ++  GD++++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRY 4125

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4172

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3263 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3317

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3318 VACGSSHS 3325



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L NL  V VA       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVVQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 268 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 323
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+++++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ ++  GQVY +GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            LK   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R  Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 2812 PTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 2869

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 2870 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 2928

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 2929 VVDVAAGGAHS---ACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 2985

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      + +D  V +WG G YG LG G  +   VP  V AL  + A+ V  G   +
Sbjct: 2986 CGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFS 3045

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3046 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3094

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3095 L----HCVCCTEDGEVYTWGDNDEGQLG 3118



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  +  +Q A G+     ++  G+VYA G+ + G  
Sbjct: 1801 LNDKDQLGGLKGSKIK-VPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRL 1859

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  +  V  P+ V +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 1860 GLGV-SSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFS 1918

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L++  +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 1919 RXNCDKPR-LIEALKSRRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 1974

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   L+  + V VA G+  A  +    +G V +WG G +G LG G  E  +VP+
Sbjct: 1975 LKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQ 2032

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2033 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 2084

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2085 VVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2125



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 19/289 (6%)

Query: 53   AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
            + G   T L +D G+V+++G+   G+  +  +       P+L+E+LK+  +   A G+  
Sbjct: 1889 SGGRHATALTAD-GKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSH 1945

Query: 113  TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            +A L+  G +YT+  G   RLGH      ++P  ++  L    VVQ+A G      LA  
Sbjct: 1946 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLVGHRVVQVACGSRDAQTLALT 2004

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
              G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  + + G 
Sbjct: 2005 DEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLALTKSGV 2060

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY++G  +
Sbjct: 2061 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 2120

Query: 292  SASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 339
                        QGN    V   P LV  L+      V    ++S+ W 
Sbjct: 2121 HGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2160



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  +  VQ+A G   L A+  +     VY
Sbjct: 1793 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGK---VY 1849

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR +       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 1850 ACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEG 1909

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 1910 DDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 1968

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  V  RVVQ++  +    +A T ALT+ G ++++G GD
Sbjct: 1969 -------GDNTTQLKPKMVKVL--VGHRVVQVACGSR---DAQTLALTDEGLVFSWGDGD 2016

Query: 359  KGQLG 363
             G+LG
Sbjct: 2017 FGKLG 2021



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD 2963

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 2964 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGC 3021

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +   L  +  V++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3022 KVPMKV-DALTGLGAVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3077

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3078 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3135

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 3136 GKKVNRVACGSAHTLAWS 3153



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +   Q+  G   L A+   
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTP-CEALAALRPAQLIGGEQTLFAVT-- 2837

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 2838 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  G +Y++G G  
Sbjct: 2897 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRY 2956

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LTE   ++
Sbjct: 2957 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTEDDTVW 3003

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3004 SWGDGDYGKLG 3014



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R++Q A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 1977 PKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNI 2034

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2035 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2093

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 2094 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2142


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 164/336 (48%), Gaps = 31/336 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  + L
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131

Query: 168 ALACQPSGMA--VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
           A+      MA  V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 132 AVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAA 184

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH    D         L P  V +LK  +  + QIS      W  HT AL
Sbjct: 245 TYGWSKYGQLGHGDFEDH--------LVPHKVEALK--DSTISQISGG----WR-HTMAL 289

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           T  GKLY +G    GQ+G   V N  +  +P +V  
Sbjct: 290 TSEGKLYGWGWNKFGQVG---VGNNDDHSSPGQVSF 322



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 134/267 (50%), Gaps = 10/267 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQG++I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 165

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + +++ V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++E   +
Sbjct: 166 AFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKM 224

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + + ++   +   +Y+ G    G+LGHG   D   P  +E  +   +  +  
Sbjct: 225 VLVACGWRHTITVSDSGN---LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI-- 279

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  +G++  WGW ++G +G GN +  S P  V    D K   VA G   T
Sbjct: 280 -SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHT 338

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIAD 302
             +SE  +V+S+G G S  LG+  I D
Sbjct: 339 LALSEKKNVFSWGRGTSGQLGNGEIVD 365



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ + + +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 146 QNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 205

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +L+  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 206 DRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L++  + QI+ G+ + +AL  +     +Y  G    G++G G+  D   P  
Sbjct: 264 VPHKVE-ALKDSTISQISGGWRHTMALTSEGK---LYGWGWNKFGQVGVGNNDDHSSPG- 318

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q      Q +   A  W H   + +   V +WG G  G LG+G     + P ++ AL+
Sbjct: 319 --QVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 376


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 27/334 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPAITSVIC 72

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  + L
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 131

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V 
Sbjct: 132 AVTMAGE---VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK--MIAAGAEHTAAVT 186

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y++
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P  V +LK  +  + QIS      W  HT ALT 
Sbjct: 247 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSTISQISGG----WR-HTMALTS 291

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            GKLY +G    GQ+G   V N  +  +P +V  
Sbjct: 292 EGKLYGWGWNKFGQVG---VGNNDDHSSPGQVSF 322



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 10/222 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQG++I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 165

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + +++ V   A G   TA ++ +G +Y + WG    LG     + + P   + ++E   +
Sbjct: 166 AFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEK-VSSVEGEKM 224

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + + ++   SG  +Y+ G    G+LGHG   D   P  +E  +   +  +  
Sbjct: 225 VLVACGWRHTITVS--DSG-NLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQI-- 279

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            +G W H   +  +G++  WGW ++G +G GN +  S P  V
Sbjct: 280 -SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV 320



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 6/178 (3%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ + + +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 146 QNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 205

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +L+  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 206 DRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            PH +   L++  + QI+ G+ + +AL  +     +Y  G    G++G G+  D   P
Sbjct: 264 VPHKVE-ALKDSTISQISGGWRHTMALTSEGK---LYGWGWNKFGQVGVGNNDDHSSP 317



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           R G   L  R     P    S++G +++  A G   T+ +SD+G +Y +G   +G+  +G
Sbjct: 198 RYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 257

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHT 137
                LV  P  VE+LK+  + Q + G   T  L+ EG++Y + W    ++G      H+
Sbjct: 258 DFEDHLV--PHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHS 315

Query: 138 EPNDV 142
            P  V
Sbjct: 316 SPGQV 320


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 159/323 (49%), Gaps = 39/323 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L+   ++Q A G+G T+++S+ G VY +G+   G   +G  G K V  P++VE+
Sbjct: 31  PVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYV--PRIVEA 88

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL---ENI 154
           L+   +VQA  G++ TA ++ +G +YT+  G   +LGH  E     P P +      E  
Sbjct: 89  LEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESG--HPTPCMVKHLRDEGA 146

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQP 213
            V QIA G  + + L        VY+ G    G +GH +    ++ PR++E  Q   +  
Sbjct: 147 RVTQIACGSRHTVVLTDLGK---VYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQ 203

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V  AA  +H A +   G + TWG G++G LGHG E  + VP++V+AL   +  HVA G +
Sbjct: 204 V--AACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGF 261

Query: 274 TTFVV-----------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            +  +            E G VY+FG G+   LGH  +          V  P LV  L  
Sbjct: 262 HSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDV--------RKVSVPTLVAGL-- 311

Query: 323 VNERVVQISLTNSIYWNAHTFAL 345
           V   VV+++      +N HT AL
Sbjct: 312 VKMHVVKVA-----SYNEHTAAL 329



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 22/299 (7%)

Query: 65  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
           AG VY++G+   G+   G+  T     P LV++LK+  VVQ A G+  T VLS +G VYT
Sbjct: 6   AGLVYSWGRGEDGQ--LGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYT 63

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           +  G+D RLGH        P  ++  LE   +VQ   G  +  A+  +     +Y+ G G
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPR-IVEALEGQRIVQATCGSYHTAAVTDKGE---LYTWGGG 119

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           + GKLGHG+ +    P +++  +    +   +A G+ H  V+   G+V TWG    G +G
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVG 179

Query: 245 HGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           H N +  + +P+++++L       VA   + T  ++  G+++++G G+   LGH      
Sbjct: 180 HTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGM---- 235

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                 N + P++V +L  + +RV  ++         H+ A+ +SG+LY +G G+ GQ+
Sbjct: 236 ----ERNQMVPRMVEAL--MGKRVGHVACG-----GFHSAAILDSGELYTWGGGEHGQV 283



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 22/253 (8%)

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G VY++  G D +LG   + ND +   L+  L++  VVQ+A G  + + L+      AVY
Sbjct: 7   GLVYSWGRGEDGQLGL-GDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLS---EDGAVY 62

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           + G G  G+LGHG    +  PR++E  +    + V    G++H A V   G + TWG G 
Sbjct: 63  TWGRGDDGRLGHGDNGWKYVPRIVEALE--GQRIVQATCGSYHTAAVTDKGELYTWGGGM 120

Query: 240 YGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           YG LGHGNE     P +V+ L D   +   +A G   T V+++ G VY++G  E+  +GH
Sbjct: 121 YGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                   N   +   P+++ SL+   + V Q++         HT ALT +G+++ +G G
Sbjct: 181 T-------NADGHQYLPRMLESLQA--KTVTQVAACG-----FHTAALTAAGEIFTWGEG 226

Query: 358 DKGQLGIELVNNQ 370
             G+LG  +  NQ
Sbjct: 227 KFGRLGHGMERNQ 239



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 20/147 (13%)

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V +WG G  G LG G+   +  P +V AL     + VA G   T V+SEDG VY++G 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G+   LGH       G ++     P++V +L+   +R+VQ +  +      HT A+T+ G
Sbjct: 67  GDDGRLGHG----DNGWKY----VPRIVEALE--GQRIVQATCGSY-----HTAAVTDKG 111

Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNP 376
           +LY +G G  G+LG     +  E G+P
Sbjct: 112 ELYTWGGGMYGKLG-----HGNESGHP 133


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           +SL  +NI  + A         LS  G V+++  G+  RLGH       EP     L G 
Sbjct: 489 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4038

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4097

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4098 VVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4214

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4263

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4264 L----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E L N+ V+Q A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 440 VSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 657 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3029 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3087

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3088 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3143

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3144 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3202 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3253

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3254 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3294



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2962 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3018

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3019 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3137

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3138 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3185

Query: 359  KGQLG 363
             G+LG
Sbjct: 3186 FGKLG 3190



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG ++ +GK  +G   +G    +L   P+LVE+
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEA 4144

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 4203

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4204 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4258

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4259 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318

Query: 276  FVVS 279
               S
Sbjct: 4319 LAWS 4322



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEV 4065

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4125

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4172

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3263 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3317

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3318 VACGSSHS 3325



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L NL  + VA       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 498

Query: 268 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 323
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+++++L  KQ 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKMISALSGKQA 550

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 551 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ ++  GQVY +GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            LK   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
           gallopavo]
          Length = 4815

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLG--------------PQLV 464

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           +SL  +NI  + A         LS  G V+++  G+  RLGH       EP     L G 
Sbjct: 465 QSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGK 524

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 525 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 581

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 582 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 641

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+  LK   ++V+ +
Sbjct: 642 GSQFSIALTKDGQVYTWGKGDNQRLGHGT--------EEHVRYPKLLEGLK--GKKVIDV 691

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 692 AAGST-----HCLALTEDSEVHSWGSNDQCQ 717



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3957 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4014

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4015 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4073

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4074 VVDIAAGGAHS---ACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4130

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4131 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4190

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4191 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4239

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4240 L----HCVCCTEDGEVYTWGDNDEGQLG 4263



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E L ++ VVQ A       +LSR GRVYT ++ +D  LG            L+
Sbjct: 416 VSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQ----------LV 464

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L +  +V+IAA   G+ Y   LA   +G  V+S GCG GG+LGHG     + P+LI  
Sbjct: 465 QSLASRNIVKIAAHSDGHHY---LALSANG-EVFSWGCGDGGRLGHGDTVPLEEPKLISA 520

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 521 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 580

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 581 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 633 DLD--IVKVRCGSQF-----SIALTKDGQVYTWGKGDNQRLG 667



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2946 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3004

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+++++  G+D +LGH +
Sbjct: 3005 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFS 3063

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3064 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3119

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3120 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3177

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3178 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3229

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3230 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3270



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2938 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2994

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG++ +WG G
Sbjct: 2995 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG 3054

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3055 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3113

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3114 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3161

Query: 359  KGQLG 363
             G+LG
Sbjct: 3162 FGKLG 3166



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  I+ AG ++ +GK  +G   +G    +L   P+LVE+
Sbjct: 4063 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEA 4120

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4121 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 4179

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4180 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4234

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4235 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4294

Query: 276  FVVS 279
               S
Sbjct: 4295 LAWS 4298



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3926 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3982

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3983 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4041

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + +A G   +  ++  GD++++G G  
Sbjct: 4042 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4101

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4102 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4148

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4149 SWGDGDYGKLG 4159



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3122 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3179

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3180 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3238

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3239 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3287



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 27/168 (16%)

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L +L  V +A       ++ ++GRV T  +     LG         P++VQ+L     + 
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVK 474

Query: 268 VA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQV 323
           +A  +  +    +S +G+V+S+GCG+   LGH      +         P+L+++L  KQ 
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE--------EPKLISALSGKQA 526

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +QT
Sbjct: 527 GKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSEDQT 569



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ ++  GQVY +GK       +G +  + V  P+L+E
Sbjct: 624 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLE 681

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            LK   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 682 GLKGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRITKPEPAALPGLDTKH 739

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 740 IVGIACG 746


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C +L   R IQ   G      ++  G+V+A G  +      GV GT+ V+ P  +ES
Sbjct: 4485 PVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGYGA--GGRLGVGGTESVSHPTQLES 4542

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++  G D +LGH        P  ++ +L    
Sbjct: 4543 IQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPR-VIDSLRGKE 4601

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E  +   +  + 
Sbjct: 4602 VVDIAAGGAHS---ACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMA 4658

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  ++ L     + V  G   +
Sbjct: 4659 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFS 4718

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V++L+  N++V+ ++    
Sbjct: 4719 VALTKSGSVYTWGKGDYHRLGHGS--------DDHVRRPRKVSALQ--NKKVIDVACG-- 4766

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
               + H  A T++G+++++G  D+GQLG
Sbjct: 4767 ---SLHCVACTDTGEVFSWGDNDEGQLG 4791



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 26/330 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G+     ++  G+VYA G+ + G    G+  T  V+ P+ + S
Sbjct: 3488 PTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGIT-TGTVSVPRQITS 3546

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L    + + A+  G   +  L+ +G+V+++  G+D +LGH +  N  +P  L+  L++  
Sbjct: 3547 LSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPR-LIEALKSKR 3605

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V  IA G  +  A+    S   +Y+ G G  G+LGHG  T +  P+ ++   L + + V 
Sbjct: 3606 VRDIACGSSHSAAIT---SNGDLYTWGLGEYGRLGHGDNTTQLKPKQVK--ALAHERVVQ 3660

Query: 216  VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            VA G+  A  +    +G+V +WG G +G LG G  E  +VP  V  L D K   +  G  
Sbjct: 3661 VACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQ 3720

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +++ G V+++G G+   LGH           A+V  PQ+V  LK   +++V +++ 
Sbjct: 3721 FSLALTKSGQVWTWGKGDYFRLGHGT--------DAHVRKPQIVEGLK--GKKIVHVAVG 3770

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   H  A+T+SG+++A+G  D GQ G
Sbjct: 3771 -----ALHCLAVTDSGQVFAWGDNDHGQQG 3795



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 28/301 (9%)

Query: 68   VYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            V+ +G   KD  G    G +G+K +  P L ++L  +  VQ   G+     +++EG+VY 
Sbjct: 3466 VFCWGLNDKDQLG----GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYA 3520

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
                 + RLG       V     + +L    + ++A       +LA    G  V+S G G
Sbjct: 3521 CGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDG-KVFSWGEG 3579

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLGH SR +   PRLIE  +   ++   +A G+ H+A +  +G + TWG G YG LG
Sbjct: 3580 DDGKLGHFSRWNCDKPRLIEALKSKRVRD--IACGSSHSAAITSNGDLYTWGLGEYGRLG 3637

Query: 245  HGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            HG+   +  PK V+AL   + + VA G  D  T  ++++G VYS+G G+   LG      
Sbjct: 3638 HGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG---- 3693

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
              G+   NV  P  V  L+  +++V QI           + ALT+SG+++ +G GD  +L
Sbjct: 3694 --GSEGCNV--PHEVDRLR--DQKVCQIECGAQF-----SLALTKSGQVWTWGKGDYFRL 3742

Query: 363  G 363
            G
Sbjct: 3743 G 3743



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 29/304 (9%)

Query: 65   AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            +GQ++ +G +  G+   GV G K V  P   E+L     +Q   G      ++ EG+V+ 
Sbjct: 4460 SGQIWGWGHNHRGQLG-GVDGAK-VKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFA 4517

Query: 125  FSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIA--AGYCYLLALACQPSGMAVYSV 181
               G  A         +   HP  L +++++ + ++A  +G  + LAL+ +     VYS 
Sbjct: 4518 T--GYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGE---VYSW 4572

Query: 182  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            G G  GKLGHG+R+    PR+I+   L   + V +AAG  H+A +  +G + TWG GRYG
Sbjct: 4573 GEGEDGKLGHGNRSPCDRPRVID--SLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630

Query: 242  CLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
             LGHG+ E +  PK+V+AL   + + +A  +GD  T  +++D +V+S+G G+   LG   
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4690

Query: 300  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
             +DG          P  + +L+   + V+++   +       + ALT+SG +Y +G GD 
Sbjct: 4691 -SDG-------CKVPMKIETLQ--GQGVMKVECGSQF-----SVALTKSGSVYTWGKGDY 4735

Query: 360  GQLG 363
             +LG
Sbjct: 4736 HRLG 4739



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 129/257 (50%), Gaps = 19/257 (7%)

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           L+ +G V+++  G+  +LGH    N  EP  + G L    V +I  G  Y +AL    S 
Sbjct: 634 LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSSYSVALT---SN 689

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             VYS G G  G+LGHGS  D+  P L++ F+   +  V   +G      V   G V +W
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSW 749

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G YG LG G  +    PKV++ L     + V  G+  +  +++ G VY++G G++  L
Sbjct: 750 GDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRL 809

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH          HA    P+ + +L   +++V  I++      + H  A+TE G+LY +G
Sbjct: 810 GHGT------EDHAR--HPKQIEALS--SKKVKDIAIG-----SLHCMAITEDGELYGWG 854

Query: 356 AGDKGQLGIELVNNQTE 372
             ++GQLG   ++N TE
Sbjct: 855 RNEQGQLGNPSISNFTE 871



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 15/294 (5%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           IRI     G     L SD G+V+++G    G+  +G         P L+  L    V + 
Sbjct: 620 IRIASHPDGKHYMGLTSD-GEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKI 676

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
             G+ ++  L+  G VY++  GN  RLGH +  +   P  LL   +   +V +A G    
Sbjct: 677 CCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDA 735

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
             LA   SG AVYS G G  GKLG G     K P++IE  +L+    V V  G   +  +
Sbjct: 736 QTLAVTDSG-AVYSWGDGDYGKLGRGGNDGCKTPKVIE--KLMGQDVVRVYCGNQFSMAL 792

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            + G V TWG G    LGHG E+    PK ++AL+  K   +A G      ++EDG++Y 
Sbjct: 793 TKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYG 852

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           +G  E   LG+ +I        +N   P L+  ++  N   V    T +  W +
Sbjct: 853 WGRNEQGQLGNPSI--------SNFTEPTLIGGMEGKNIIGVACGPTQTFAWTS 898



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 10/236 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G  ++  AAG   +  I+  G++Y +GK  +G   +G   ++    P+LVE+
Sbjct: 4591 PRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHG--DSEDQPRPKLVEA 4648

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            LK+  VV  A G  +  T  ++ +  V+++  G+  +LG         P  +  TL+   
Sbjct: 4649 LKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKI-ETLQGQG 4707

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+++  G  + +AL    SG +VY+ G G   +LGHGS    + PR +   Q  N + + 
Sbjct: 4708 VMKVECGSQFSVALT--KSG-SVYTWGKGDYHRLGHGSDDHVRRPRKVSALQ--NKKVID 4762

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            VA G+ H       G V +WG    G LG G       P++V +L   K   VA G
Sbjct: 4763 VACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACG 4818



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 11/250 (4%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    +L+  R+   A G+  +  I+  G +Y +G   +G   +G 
Sbjct: 3581 DGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              T+L   P+ V++L +  VVQ A G  +  T  L+ EG+VY++  G+  +LG       
Sbjct: 3641 NTTQL--KPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGC 3698

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              PH +   L +  V QI  G  + LAL    SG  V++ G G   +LGHG+    + P+
Sbjct: 3699 NVPHEV-DRLRDQKVCQIECGAQFSLALT--KSGQ-VWTWGKGDYFRLGHGTDAHVRKPQ 3754

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++E  +   +  V VA GA H   V   G+V  WG   +G  G+G       P +V  L 
Sbjct: 3755 IVEGLKGKKI--VHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALV-VLE 3811

Query: 262  DVKAIHVATG 271
              K   VA G
Sbjct: 3812 GYKISKVACG 3821



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 10/247 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L G ++ +   G+  ++ ++  G+VY++GK +FG   +G   ++  T+P L++ 
Sbjct: 662 PALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHG--SSEDQTTPMLLKF 719

Query: 98  LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            K   +V  A G  +  T  ++  G VY++  G+  +LG         P  ++  L    
Sbjct: 720 FKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPK-VIEKLMGQD 778

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV++  G  + +AL    SG AVY+ G G   +LGHG+    +HP+ IE      ++ + 
Sbjct: 779 VVRVYCGNQFSMALT--KSG-AVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDI- 834

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            A G+ H   + +DG +  WG    G LG+ +    + P ++  +     I VA G   T
Sbjct: 835 -AIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQT 893

Query: 276 FVVSEDG 282
           F  +  G
Sbjct: 894 FAWTSGG 900



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 10/174 (5%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E   TP+  +  +G RI+  A G+G  +T+ ++D+G VY++G   +G+   G  G     
Sbjct: 709 EDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGK--LGRGGNDGCK 766

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LG 149
           +P+++E L    VV+   GN F+  L++ G VYT+  G++ RLGH TE  D   HP  + 
Sbjct: 767 TPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTE--DHARHPKQIE 824

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            L +  V  IA G  + +A+        +Y  G    G+LG+ S ++   P LI
Sbjct: 825 ALSSKKVKDIAIGSLHCMAIT---EDGELYGWGRNEQGQLGNPSISNFTEPTLI 875



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H   +  DG V +WG G  G LGHG+ +    P ++  L+  +   +  G   +  ++ +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G+VYS+G G    LGH +  D          TP L+   K    R+V ++  +    +A 
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQT--------TPMLLKFFK--GHRIVDVACGSG---DAQ 736

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T A+T+SG +Y++G GD G+LG
Sbjct: 737 TLAVTDSGAVYSWGDGDYGKLG 758


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 22/292 (7%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           + G P  C+ +Q    +    GA   ++++ AGQVY+ G ++ G+   G+  TK+  S  
Sbjct: 127 MEGLPPDCKVVQ----VSCFNGAEHVLVVTSAGQVYSCGCNNHGQ--LGLGSTKMSPSLL 180

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           LVESLK++ V+ A+     + V+S +G  ++F   +  +LG  T PN + PH +   L +
Sbjct: 181 LVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV--ELPS 238

Query: 154 IPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
             +V++AA G  + + L     GM V+S G  L G+LG GSR+    P LI   Q     
Sbjct: 239 PHLVRLAACGQYHTIFLT--EEGM-VFSCGKNLNGQLGLGSRSSTNVPTLIAALQ--ERP 293

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             ++A G  H  VV +DG++ T+G+   G LG G+ +  S P  V+ L +VK + ++ G 
Sbjct: 294 ASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGT 353

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           + T V+SE G+++SFGC     LG   + D       + L P LV S+ + N
Sbjct: 354 HFTCVLSESGELWSFGCNCHGQLG---LGDS-----TDRLVPVLVPSMTKKN 397



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 145/311 (46%), Gaps = 33/311 (10%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           D G V+A G++  GE  +     ++  S  LV+SL+   +V+ A G+  +  L+ EG+VY
Sbjct: 39  DCG-VFACGQNRKGELGHSTFREQVEMS--LVQSLRRKRIVKVAAGSETSYFLTEEGKVY 95

Query: 124 TF---SWGNDARLGHHTEPNDVEPHPL-LGTLENIP----VVQIAA--GYCYLLALACQP 173
                S G  AR  H    N  + +   +  +E +P    VVQ++   G  ++L +    
Sbjct: 96  CCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVT--- 152

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S   VYS GC   G+LG GS   +  P L+    L +++ +  +    H+ VV  DG   
Sbjct: 153 SAGQVYSCGCNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAF 210

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           ++G    G LG G    + +P  V+  +       A G Y T  ++E+G V+S G   + 
Sbjct: 211 SFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNG 270

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG        G+R ++   P L+ +L++    ++    +       HT  + E GKL+ 
Sbjct: 271 QLG-------LGSR-SSTNVPTLIAALQERPASMIACGYS-------HTCVVLEDGKLFT 315

Query: 354 FGAGDKGQLGI 364
           FG   +GQLG+
Sbjct: 316 FGYNHQGQLGL 326



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L   +++ + L   SL+ +R++ A+     ++++S  G  ++FG +  G+   G 
Sbjct: 165 HGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGT 224

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
           +  +L+  P  VE      V  AA G + T  L+ EG V++     + +LG  +  +   
Sbjct: 225 RPNQLL--PHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNV 282

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  L+  L+  P   IA GY +   +        +++ G    G+LG G       P  +
Sbjct: 283 P-TLIAALQERPASMIACGYSHTCVVL---EDGKLFTFGYNHQGQLGLGHTDSVSSPMQV 338

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E   L N++ V ++ G     V+ + G + ++G   +G LG G+     VP +V ++   
Sbjct: 339 E--TLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKK 396

Query: 264 KAIHVATGDYTTFVVS 279
               +A G +    +S
Sbjct: 397 NLSEIACGFHHLVAIS 412



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G    G+LGH +  ++    L++  +   +  V VAAG+  +  + ++G+V   G 
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRI--VKVAAGSETSYFLTEEGKVYCCGL 99

Query: 238 GRYGCL------GHGN--EECESVPKVVQALN-DVKAIHVAT--GDYTTFVVSEDGDVYS 286
              G L      G  N  +E  S  ++++ L  D K + V+   G     VV+  G VYS
Sbjct: 100 NSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYS 159

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFA 344
            GC     LG  +            ++P L  V SLK V  RV+  S +       H+  
Sbjct: 160 CGCNNHGQLGLGSTK----------MSPSLLLVESLKHV--RVLSASCSYH-----HSVV 202

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           ++  G  ++FG  D GQLGI    NQ     P RV++
Sbjct: 203 VSSDGSAFSFGLNDCGQLGIGTRPNQLL---PHRVEL 236


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 152/316 (48%), Gaps = 24/316 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     +  +G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V S G    G+LG G+  D   P+ I+ F+ ++++  ++AAGA H A V 
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     VP+ V ++   K + VA G   T  VS  G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 248 GWSKYGQLGHGDFEDH--------LVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292

Query: 348 SGKLYAFGAGDKGQLG 363
            GKLY +G    GQ+G
Sbjct: 293 DGKLYGWGWNKFGQVG 308



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 10/280 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQGI+I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQ 166

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I V   A G   TA ++ +G +Y + WG    LG     +   P   + ++E   +
Sbjct: 167 AFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEK-VSSVEGDKM 225

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E  +  +   +  
Sbjct: 226 VLVACGWRHTITVS---SSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI-- 280

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+      P  V    + K   VA G   T
Sbjct: 281 -SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHT 339

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
              +E  +V+++G G S  LGH  I D       + L+P 
Sbjct: 340 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPD 379



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 151/336 (44%), Gaps = 25/336 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P          I     GA  T   S D  QVY++G   FG   +G   +  V +PQ V+
Sbjct: 57  PTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHG--NSTDVFTPQPVK 114

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ I + Q A G+     ++  G V ++    + +LG  T  + + P  +    E I V
Sbjct: 115 ALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQ-AFEGISV 173

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             IAAG  +  A+        +Y  G G  G LG G R D   P  +   +   +  V+V
Sbjct: 174 KMIAAGAEHTAAVTEDGD---IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKM--VLV 228

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G  H   V   G + T+GW +YG LGHG+ E   VP  V+AL D     ++ G   T 
Sbjct: 229 ACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTM 288

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++ DG +Y +G  +   +G           +A+  +P  V   ++  ++V Q++     
Sbjct: 289 ALTSDGKLYGWGWNKFGQVG--------AGDNADHCSPAQVNFPEE--QKVAQVACG--- 335

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGI-ELVNNQT 371
            W  HT A TE   ++A+G G  GQLG  E+V+  T
Sbjct: 336 -WR-HTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNT 369



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 147 QNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + V  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 207 DRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L++    QI+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 265 VPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKLYGWGWNKFGQVGAGDNADHCSP-- 318

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q      Q V   A  W H     +   V  WG G  G LGHG     + P ++ AL+
Sbjct: 319 -AQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V+SP L+ES
Sbjct: 3614 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSSPTLLES 3671

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH +      P  ++ +L  I 
Sbjct: 3672 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPR-VIESLRGIE 3730

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3731 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 3787

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3788 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFS 3847

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3848 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3896

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3897 L----HCVCCTEDGEVYTWGDNDEGQLG 3920



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S +G+VY  A+  D+               +PQLV
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTL--------------APQLV 176

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP  +    G 
Sbjct: 177 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGK 236

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 293

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 294 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 353

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 403

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 404 AAGST-----HCLALTEDSEVHSWGSNDQCQ 429



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 128 VIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDT----------LAPQ-LV 176

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P+ I  
Sbjct: 177 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKAISA 232

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 233 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 292

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 293 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 344

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 345 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 379



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2604 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2662

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2663 GLGL-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2721

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 2722 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 2777

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  +VP+
Sbjct: 2778 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQ 2835

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2836 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 2887

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2888 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2928



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2596 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2652

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2653 ACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2713 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 2771

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2772 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2819

Query: 359  KGQLG 363
             G+LG
Sbjct: 2820 FGKLG 2824



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3706 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3765

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3766 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3823

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3824 KVPTKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3879

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3880 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3937

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 3938 GKKVNRVACGSAHTLAWS 3955



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3639

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3640 -ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3698

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHG+      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3699 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3758

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3759 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3805

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3806 SWGDGDYGKLG 3816



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 278 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 335

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 336 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 394

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 395 LQGKKVIDVAAGSTHCLAL 413



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2780 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNI 2837

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2838 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2896

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 2897 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2945



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 336 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 393

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 394 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 451

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 452 IVGIACG 458


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 162/336 (48%), Gaps = 29/336 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L +  +V   
Sbjct: 16  RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDDHQIVSVT 73

Query: 108 IGNFFTAVLSREGR--VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G   T   S E R  VY++ WG+  RLGH    +   P P+   L  I + QIA G  +
Sbjct: 74  CGADHTVAYS-ESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSH 131

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A 
Sbjct: 132 CLAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAA 186

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALY 246

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH  + D         L P  + +L   N  + QIS      W  HT AL
Sbjct: 247 TYGWSKYGQLGHGDLEDH--------LVPHKLEALG--NSVISQISGG----WR-HTMAL 291

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           T  GKLY +G    GQ+G   V N  ++ +P +V I
Sbjct: 292 TSDGKLYGWGWNKFGQVG---VGNNLDQCSPVQVRI 324



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  +     +
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKM 226

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++   SG A+Y+ G    G+LGHG   D   P  +E    L    +  
Sbjct: 227 SMVACGWRHTISVSY--SG-ALYTYGWSKYGQLGHGDLEDHLVPHKLEA---LGNSVISQ 280

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 281 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHT 340

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 208 DRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 266 VPHKLE-ALGNSVISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 320

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q ++ + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 321 --QVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALS 378


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 24/319 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK---LVTSPQLVESLKNIFVVQ 105
           ++  +AGA  ++ +   G V ++G+   G+  +G    +    V +    ++   +  V 
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
               +  TA    E ++Y++ WG+  RLGH    +   P P+   L+ + + QIA G  +
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSH 145

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 146 CLAVTVAGH---VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAA 200

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y
Sbjct: 201 VTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIY 260

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH    D         L P  + +LK     + QIS      W  HT AL
Sbjct: 261 TYGWSKYGQLGHGDFEDH--------LVPHKLEALKDTT--ISQISGG----WR-HTMAL 305

Query: 346 TESGKLYAFGAGDKGQLGI 364
              GKLY +G    GQ+G+
Sbjct: 306 AADGKLYGWGWNKFGQVGV 324



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 162/341 (47%), Gaps = 21/341 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+RI Q A G    + ++ AG V+++G++  G+   G+  T+    PQ +++
Sbjct: 125 PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQA 182

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++    +V
Sbjct: 183 FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMV 241

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E  +   +  +   
Sbjct: 242 LVACGWRHTITVS---SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI--- 295

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +G W H   +  DG++  WGW ++G +G G+ E    P  V   N+ K + VA G   T 
Sbjct: 296 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 355

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++E  +V+S+G G S  LGH  I D       N+  P+++ +L        Q+  + ++
Sbjct: 356 ALTEAKNVFSWGRGTSGQLGHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAV 407

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
             +A  +      + YA    +K   GI    N TE   P+
Sbjct: 408 PMSAKVW--VSPSERYAIVPDEKAGKGIP-AGNGTETHVPQ 445



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +G+R+   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 162 QNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 221

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +L+  P+ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 222 DRDDRLI--PEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL 279

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L++  + QI+ G+ + +ALA       +Y  G    G++G G   D   P  
Sbjct: 280 VPHKLE-ALKDTTISQISGGWRHTMALAADGK---LYGWGWNKFGQVGVGDNEDHCSPV- 334

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q    N Q VV  A  W H   + +   V +WG G  G LGHG     ++PK++ AL+
Sbjct: 335 --QVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 24/319 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK---LVTSPQLVESLKNIFVVQ 105
           ++  +AGA  ++ +   G V ++G+   G+  +G    +    V +    ++   +  V 
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
               +  TA    E ++Y++ WG+  RLGH    +   P P+   L+ + + QIA G  +
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSH 140

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 141 CLAVTVAGH---VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAA 195

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y
Sbjct: 196 VTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIY 255

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH    D         L P  + +LK     + QIS      W  HT AL
Sbjct: 256 TYGWSKYGQLGHGDFEDH--------LVPHKLEALKDTT--ISQISGG----WR-HTMAL 300

Query: 346 TESGKLYAFGAGDKGQLGI 364
              GKLY +G    GQ+G+
Sbjct: 301 AADGKLYGWGWNKFGQVGV 319



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 162/341 (47%), Gaps = 21/341 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+RI Q A G    + ++ AG V+++G++  G+   G+  T+    PQ +++
Sbjct: 120 PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQA 177

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++    +V
Sbjct: 178 FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMV 236

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E  +   +  +   
Sbjct: 237 LVACGWRHTITVS---SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQI--- 290

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +G W H   +  DG++  WGW ++G +G G+ E    P  V   N+ K + VA G   T 
Sbjct: 291 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 350

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++E  +V+S+G G S  LGH  I D       N+  P+++ +L        Q+  + ++
Sbjct: 351 ALTEAKNVFSWGRGTSGQLGHGEIVD------RNI--PKMIDALSSDGSACKQLESSKAV 402

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
             +A  +      + YA    +K   GI    N TE   P+
Sbjct: 403 PMSAKVW--VSPSERYAIVPDEKAGKGIP-AGNGTETHVPQ 440



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +G+R+   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 157 QNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 216

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +L+  P+ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 217 DRDDRLI--PEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL 274

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L++  + QI+ G+ + +ALA       +Y  G    G++G G   D   P  
Sbjct: 275 VPHKLE-ALKDTTISQISGGWRHTMALAADGK---LYGWGWNKFGQVGVGDNEDHCSPV- 329

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q    N Q VV  A  W H   + +   V +WG G  G LGHG     ++PK++ AL+
Sbjct: 330 --QVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 167/332 (50%), Gaps = 29/332 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ A G      I+  G+VYA G  +      G+ G + VT P L+ES
Sbjct: 3638 PTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGYGA--GGRLGIGGAESVTVPSLLES 3695

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+++FV + A+  G      LS EG VY++  G D +LGH  +     P  ++ +L    
Sbjct: 3696 LQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPR-IIESLRGKD 3754

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +A G  +  A+        +Y+ G G  G+LGHG   D+  P+L+E   LL  + + 
Sbjct: 3755 VVDVACGGAHSAAITALGE---LYTWGKGRYGRLGHGDSDDQLKPKLVEA--LLGYRVMD 3809

Query: 216  VAAGAWHA---AVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            VA G+  A   A+  ++G  V +WG G YG LG G  +   +P  +++L+ +  I V  G
Sbjct: 3810 VACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECG 3869

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
               +  +S +G VY++G G+   LGH    D    R   V+T Q         ++V+ IS
Sbjct: 3870 SQFSVALSNNGSVYTWGKGDYHRLGHGV--DEHVRRPKKVMTLQ--------GKKVISIS 3919

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             T ++    H    T+ G++Y +G  D+GQLG
Sbjct: 3920 -TGAL----HCVVCTDQGEVYTWGDNDEGQLG 3946



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 27/321 (8%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ I  A G+    L++ +G+ YA G+ S G    G+  ++ V SP  + +L    V + 
Sbjct: 2731 LQPISVAGGSKSLFLVTQSGKAYACGEGSNGR--LGLGHSRNVNSPHQITALSQHVVRKV 2788

Query: 107  AI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
            A+  G      L+ +GRV+++  G+D +LGH  +   ++    +  L    V  +AAG  
Sbjct: 2789 AVHSGGRHALALTADGRVFSWGEGDDGKLGH-GDVTSLDTPRCIEALNGFRVRDVAAGSN 2847

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            +  A+    S   +Y+ G G  G+LGHG    +  P+ +E   L+  + V V+ G+  A 
Sbjct: 2848 HSAAVT---SSGELYTWGLGEYGRLGHGDNLTQLTPKRVES--LVGQRVVQVSCGSRDAQ 2902

Query: 225  VVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             +   + G V +WG G +G LG G  E  S P +V  L+ +   HV  G   +  ++ +G
Sbjct: 2903 TLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNG 2962

Query: 283  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
             VY++G G+   LGH +      ++H  V  P LV  L+   ++V+ +S+        H 
Sbjct: 2963 HVYTWGKGDYFRLGHGS------DQH--VRWPTLVEGLR--GKKVIGVSVGA-----LHC 3007

Query: 343  FALTESGKLYAFGAGDKGQLG 363
             A+T++G+++A+G  D GQ G
Sbjct: 3008 LAVTDAGQVFAWGDNDHGQQG 3028



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 160/304 (52%), Gaps = 29/304 (9%)

Query: 66   GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            GQ+Y +G +  G+   GV+G K V  P + E+L  +  +Q A G      ++ +GRVY  
Sbjct: 3614 GQIYGWGHNHRGQLG-GVEGAK-VKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYAT 3671

Query: 126  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA--AGYCYLLALACQPSGMAVYSVGC 183
             +G   RLG     +   P  LL +L+++ V ++A  +G  + LAL+   S   VYS G 
Sbjct: 3672 GYGAGGRLGIGGAESVTVPS-LLESLQHVFVKKVAVNSGGKHCLALS---SEGEVYSWGE 3727

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  GKLGHG++     PR+IE  +  ++  V VA G  H+A +   G + TWG GRYG L
Sbjct: 3728 GEDGKLGHGNKLPCDRPRIIESLRGKDV--VDVACGGAHSAAITALGELYTWGKGRYGRL 3785

Query: 244  GHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSED--GDVYSFGCGESASLGHNA 299
            GHG+ + +  PK+V+AL   + + VA  +GD  T  ++++  G V+S+G G+   LG   
Sbjct: 3786 GHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGG 3845

Query: 300  IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
             +DG          P  + SL  +   ++++   +       + AL+ +G +Y +G GD 
Sbjct: 3846 -SDG-------CKIPTKIESLSGLG--IIKVECGSQF-----SVALSNNGSVYTWGKGDY 3890

Query: 360  GQLG 363
             +LG
Sbjct: 3891 HRLG 3894



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 25/311 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQL 94
            P    SLQ + + + A  +G    + +S  G+VY++G+   G+  +G    KL    P++
Sbjct: 3690 PSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHG---NKLPCDRPRI 3746

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +ESL+   VV  A G   +A ++  G +YT+  G   RLGH    + ++P  L+  L   
Sbjct: 3747 IESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPK-LVEALLGY 3805

Query: 155  PVVQIAAGYCYLLALA-CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             V+ +A G       A     G  V+S G G  GKLG G     K P  IE    L +  
Sbjct: 3806 RVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGI-- 3863

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            + V  G+  +  +  +G V TWG G Y  LGHG +E    PK V  L   K I ++TG  
Sbjct: 3864 IKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGAL 3923

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
               V ++ G+VY++G  +   LG     DG       +  P+LV +L+  N+++ ++S  
Sbjct: 3924 HCVVCTDQGEVYTWGDNDEGQLG-----DGTTT---GIQKPRLVAALQ--NKKINRVSCG 3973

Query: 334  NSIYWNAHTFA 344
                 +AHT A
Sbjct: 3974 -----SAHTVA 3979



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 118/243 (48%), Gaps = 17/243 (6%)

Query: 121  RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
            RVY +   +  +LG         P  +  T+   P+    AG    L L  Q SG A Y+
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPIS--VAGGSKSLFLVTQ-SGKA-YA 2754

Query: 181  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
             G G  G+LG G   +   P  I       ++ V V +G  HA  +  DGRV +WG G  
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDD 2814

Query: 241  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            G LGHG+      P+ ++ALN  +   VA G   +  V+  G++Y++G GE   LGH   
Sbjct: 2815 GKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGH--- 2871

Query: 301  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                   +   LTP+ V SL  V +RVVQ+S  +    +A T AL E G +Y++G GD G
Sbjct: 2872 -----GDNLTQLTPKRVESL--VGQRVVQVSCGSR---DAQTLALVEGGLVYSWGDGDFG 2921

Query: 361  QLG 363
            +LG
Sbjct: 2922 KLG 2924



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 148/307 (48%), Gaps = 29/307 (9%)

Query: 62   ISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
            +S A +VY +G   K+  G    G +G+K +  PQ V+   ++  +  A G+    ++++
Sbjct: 2694 VSGAKRVYVWGLNDKEQLG----GPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQ 2748

Query: 119  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
             G+ Y    G++ RLG     N   PH +    +++ V ++A       ALA    G  V
Sbjct: 2749 SGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHV-VRKVAVHSGGRHALALTADGR-V 2806

Query: 179  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            +S G G  GKLGHG  T    PR IE      ++   VAAG+ H+A V   G + TWG G
Sbjct: 2807 FSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRD--VAAGSNHSAAVTSSGELYTWGLG 2864

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLG 296
             YG LGHG+   +  PK V++L   + + V+ G  D  T  + E G VYS+G G+   LG
Sbjct: 2865 EYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLG 2924

Query: 297  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                ++G         +P LV  L  +    V+     S+       ALT +G +Y +G 
Sbjct: 2925 RGG-SEGCS-------SPCLVDKLSGLGVCHVECGAQFSV-------ALTCNGHVYTWGK 2969

Query: 357  GDKGQLG 363
            GD  +LG
Sbjct: 2970 GDYFRLG 2976



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 14/294 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            +R +   +G    + ++  G+V+++G+   G+  +G      + +P+ +E+L    V   
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHG--DVTSLDTPRCIEALNGFRVRDV 2842

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      + P   + +L    VVQ++ G    
Sbjct: 2843 AAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPK-RVESLVGQRVVQVSCGSRDA 2901

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G+ VYS G G  GKLG G       P L+++   L +    V  GA  +  +
Sbjct: 2902 QTLALVEGGL-VYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV--CHVECGAQFSVAL 2958

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              +G V TWG G Y  LGHG+++    P +V+ L   K I V+ G      V++ G V++
Sbjct: 2959 TCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFA 3018

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +G  +    G+ +I     NR      P LV  +  +    V    ++S+ W A
Sbjct: 3019 WGDNDHGQQGNGSIT---VNRR-----PTLVQGIDGIKITRVACGSSHSVAWTA 3064



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 10/237 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP    +L G R+   AAG+  +  ++ +G++Y +G   +G   +G   T+L  +P+ VE
Sbjct: 2827 TPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQL--TPKRVE 2884

Query: 97   SLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL    VVQ + G  +  T  L   G VY++  G+  +LG         P  L+  L  +
Sbjct: 2885 SLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPC-LVDKLSGL 2943

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  +  G  + +AL C      VY+ G G   +LGHGS    + P L+E  +    + +
Sbjct: 2944 GVCHVECGAQFSVALTCNGH---VYTWGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVI 2998

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V+ GA H   V   G+V  WG   +G  G+G+      P +VQ ++ +K   VA G
Sbjct: 2999 GVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 6/155 (3%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK    G E   +P     L G+ +     GA  ++ ++  G VY +GK  +    +G  
Sbjct: 2921 GKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHG-- 2978

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
              + V  P LVE L+   V+  ++G      ++  G+V  F+WG++           V  
Sbjct: 2979 SDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQV--FAWGDNDHGQQGNGSITVNR 3036

Query: 145  HP-LLGTLENIPVVQIAAGYCYLLA-LACQPSGMA 177
             P L+  ++ I + ++A G  + +A  A +P  +A
Sbjct: 3037 RPTLVQGIDGIKITRVACGSSHSVAWTAPEPPSVA 3071


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 27/334 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     +  +G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV--PTVISGFDAPGITSVIC 73

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVK-ALQGIKIKQLACGDSHCL 132

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V S G    G+LG G+  D   P+ I+ F+ ++++  ++AAGA H A V 
Sbjct: 133 AVTMAGE---VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK--MIAAGAEHTAAVT 187

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     VP+ V ++   K + VA G   T  VS  G +Y++
Sbjct: 188 EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 248 GWSKYGQLGHGDFED--------HLVPHKVEALK--DSSTSQISGG----WR-HTMALTS 292

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            GKLY +G    GQ+G     +  +  +P +V+ 
Sbjct: 293 DGKLYGWGWNKFGQVG---AGDNADHCSPAQVNF 323



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 10/236 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQGI+I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL--PQTIQ 166

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I V   A G   TA ++ +G +Y + WG    LG     +   P  +  ++E   +
Sbjct: 167 AFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKV-SSVEGDKM 225

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E  +  +   +  
Sbjct: 226 VLVACGWRHTITVS---SSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQI-- 280

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            +G W H   +  DG++  WGW ++G +G G+      P  V    + K   VA G
Sbjct: 281 -SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACG 335



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 9/199 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 147 QNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + V  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 207 DRNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L++    QI+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 265 VPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKLYGWGWNKFGQVGAGDNADHCSP-- 318

Query: 203 IEQFQLLNLQPVVVAAGAW 221
             Q      Q V   A  W
Sbjct: 319 -AQVNFPEEQKVAQVACGW 336


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 23/333 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C +L  +R +Q   G      ++  G++YA G  + G     + GT+ V++P L+ES
Sbjct: 44  PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLG--IGGTESVSTPTLLES 101

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 102 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 160

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 161 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 217

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 218 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 277

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 278 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 326

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
           +    H    TE G++Y +G  D+GQLG    N
Sbjct: 327 L----HCVCCTEDGEVYTWGDNDEGQLGDGTTN 355



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 10/244 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +     +L   P+LVE+
Sbjct: 150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEA 207

Query: 98  LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           L+   VV  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 266

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 267 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 321

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 322 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 381

Query: 276 FVVS 279
              S
Sbjct: 382 LAWS 385



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 19/247 (7%)

Query: 119 EGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           +G    + WG++ R  LG         P P    L  +  VQ+  G   L A+       
Sbjct: 17  QGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE-ALATLRPVQLIGGEQTLFAVTADGK-- 73

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V +WG
Sbjct: 74  -LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
               G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G    LG
Sbjct: 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 192

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
           H+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++++G 
Sbjct: 193 HSDSED--------QLKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVWSWGD 239

Query: 357 GDKGQLG 363
           GD G+LG
Sbjct: 240 GDYGKLG 246


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 31/334 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAPGITSVIC 73

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG--YCY 165
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ + + QIA G  +C 
Sbjct: 74  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGLKIKQIACGDSHCL 132

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            + +A Q     V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 133 AVTMAGQ-----VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK--MIAAGAEHTAA 185

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+     +P+ V ++   K + VA G   T  VS+ G++Y
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G  +   LGH    D         L P  + +LK  +  + QIS      W  HT AL
Sbjct: 246 TYGWSKYGQLGHGDFEDH--------LVPHKLEALK--DSTISQISGG----WR-HTMAL 290

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           T  GKLY +G    GQ+G   V N  +  +P +V
Sbjct: 291 TSEGKLYGWGWNKFGQVG---VGNNDDHCSPVQV 321



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 14/283 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQG++I Q A G    + ++ AGQV ++G++  G+   G     L+  PQ ++
Sbjct: 109 TPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 166

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++E   +
Sbjct: 167 AFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKV-SSVEGEKM 225

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G+ + + ++   SG  +Y+ G    G+LGHG   D   P  +E  +   +  +  
Sbjct: 226 VLVACGWRHTITVS--DSG-NLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQI-- 280

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  +G++  WGW ++G +G GN +    P  V    D K   VA G   T
Sbjct: 281 -SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHT 339

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
             +SE  +V+S+G G S  LG+  I D    R+  VL   L T
Sbjct: 340 LALSEKKNVFSWGRGTSGQLGNGEIVD----RNTPVLIDALST 378



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +G+ +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 147 QNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +L+  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 207 DRNDRLL--PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L++  + QI+ G+ + +AL  +     +Y  G    G++G G+  D   P  
Sbjct: 265 VPHKLE-ALKDSTISQISGGWRHTMALTSEGK---LYGWGWNKFGQVGVGNNDDHCSPV- 319

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q      Q +   A  W H   + +   V +WG G  G LG+G     + P ++ AL+
Sbjct: 320 --QVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 377


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 153/316 (48%), Gaps = 24/316 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ + +   + ++G+   G+  +G    +LV  P ++       +     
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV--PTVISGFDAPRITSVIC 80

Query: 109 G-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + Q+A G  + L
Sbjct: 81  GADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVR-ALQGIKIKQMACGDSHCL 139

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+     G  V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V 
Sbjct: 140 AVTM---GGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVK--MIAAGAEHTAAVT 194

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     VP+ V  +   K + +A G   T  VS  G +Y++
Sbjct: 195 EDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P  V +LK  +    QIS      W  HT ALT 
Sbjct: 255 GWSKYGQLGHGDFEDH--------LFPHKVEALK--DSSTSQISGG----WR-HTMALTS 299

Query: 348 SGKLYAFGAGDKGQLG 363
            GKLY +G    GQ+G
Sbjct: 300 DGKLYGWGWNKFGQVG 315



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 13/326 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   R+LQGI+I Q A G    + ++  G+V ++G++  G+   G     L+  PQ ++
Sbjct: 116 TPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 173

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I V   A G   TA ++ +G +Y + WG    LG     +   P  +   +E   +
Sbjct: 174 AFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKV-SLVEGEKM 232

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G+ + + ++   SG+ +Y+ G    G+LGHG   D   P  +E  +  +   +  
Sbjct: 233 VLIACGWRHTITVSS--SGI-LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQI-- 287

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+      P  V    + K   VA G   T
Sbjct: 288 -SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHT 346

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +E  +V+++G G S  LGH  I D       + ++P    S K   E    +  T  
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGSGSKKL--ESSTAVPFTAK 404

Query: 336 IYWN-AHTFALTESGKLYAFGAGDKG 360
           ++ + +  +AL    K+   G G  G
Sbjct: 405 VWVSPSERYALVPDEKVAKPGVGTAG 430



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 22/226 (9%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV ++AG  + +AL     G  + S G G  G+LGHG   D   P +I  F    +  V+
Sbjct: 23  VVLVSAGASHSVALL---EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI 79

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             A     A   ++ +V +WGWG +G LGHGN      P+ V+AL  +K   +A GD   
Sbjct: 80  CGADH-TTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHC 138

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V+  G+V S+G  ++  LG     D         L PQ + + + +  +++       
Sbjct: 139 LAVTMGGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFEGICVKMIAAGAE-- 188

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                HT A+TE G LY +G G  G LG+    ++ +R  PE+V +
Sbjct: 189 -----HTAAVTEDGDLYGWGWGRYGNLGL---GDRNDRFVPEKVSL 226



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 154 QNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 213

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + V  P+ V  ++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 214 DRNDRFV--PEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL 271

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L++    QI+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 272 FPHKVE-ALKDSSTSQISGGWRHTMALT---SDGKLYGWGWNKFGQVGAGDSVDHCSPV- 326

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q      Q V   A  W H     +   V  WG G  G LGHG     + P ++ A++
Sbjct: 327 --QVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAIS 384


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 25/330 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLV 95
            PL C SL  ++  Q   G      ++  G+VYA G    G    G    K   V +PQLV
Sbjct: 3568 PLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLV 3627

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            + L NI  V    G      LS  G VY +  G+D +LG        +P  L+ +L +  
Sbjct: 3628 QGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQ-LVQSLSDKC 3686

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ IA G  +  A++       +Y+ G G  G+LGHG   D  +P+L++   L+N   V 
Sbjct: 3687 IIDIACGGFHSAAIS---RYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG--LINYHVVK 3741

Query: 216  VAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            VA G+  A    V  D  V +WG G YG LGH   E   +P  +++L+    I +  G  
Sbjct: 3742 VACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQ 3801

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +S +G +Y++G G+   LGH +          +V  P+ V+ L+   +++VQ S T
Sbjct: 3802 FSVALSANGTLYTWGKGDYFRLGHGS--------SEHVRKPKPVSGLQ--GKKIVQFS-T 3850

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S+    H  ALT+ G++YA+G  D+GQLG
Sbjct: 3851 GSL----HVLALTDDGEVYAWGDNDEGQLG 3876



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 21/308 (6%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP   + L  I  +   +G    + +S  G+VYA+G    G+   G + T   + PQLV+
Sbjct: 3623 TPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTH--SKPQLVQ 3680

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            SL +  ++  A G F +A +SR G +YT+  G   RLGH    + + P  + G L N  V
Sbjct: 3681 SLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG-LINYHV 3739

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            V++A G      + C  S   V+S G G  GKLGH      K P  IE      +  + +
Sbjct: 3740 VKVACGSGDAQTM-CVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGI--IQI 3796

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
              G+  +  +  +G + TWG G Y  LGHG+ E    PK V  L   K +  +TG     
Sbjct: 3797 DCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVL 3856

Query: 277  VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
             +++DG+VY++G  +   L       G G  H  +  P+ + +LK   +R+ Q+S     
Sbjct: 3857 ALTDDGEVYAWGDNDEGQL-------GDGTAHP-IARPRPIAALK--GKRIQQVSCG--- 3903

Query: 337  YWNAHTFA 344
              +AH+FA
Sbjct: 3904 --SAHSFA 3909



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P +  +L  ++ I+   G+    ++S+ G+V+  G  S G    G+     V+SP+ +  
Sbjct: 2617 PTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGR--LGIPFCGKVSSPRQIPG 2674

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L    +   A+  G      LS +G+V ++  G D +LGH  +   ++   L+ +L    
Sbjct: 2675 LSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGH-GDILTLDTPKLIDSLLAKR 2733

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V  IA G  +  A+    S   +Y+ G G  G+LGH     +  P+L+++F   N+  V 
Sbjct: 2734 VFYIACGSAHSAAIT---SDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVA 2790

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +       +  +G V +WG G +G LG G  +    P+ V+ L   + + +  G   +
Sbjct: 2791 CGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFS 2850

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G V+++G GE   LG      G+G    +V  P LV  LK V    + +     
Sbjct: 2851 VALTATGQVWTWGKGEYYRLGL-----GRG---EHVRRPTLVNQLKLVTIDHIAVG---- 2898

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 H  A++  G +Y +G  D GQ G
Sbjct: 2899 ---TLHCIAVSTQGDVYCWGDNDHGQQG 2923



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 141/326 (43%), Gaps = 15/326 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    M +S  G+V ++G    G+  +G   T  + +P+L++SL    V   
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILT--LDTPKLIDSLLAKRVFYI 2737

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++ +G +YT+  G   RLGH  E +   P  L+       + Q+A G    
Sbjct: 2738 ACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPK-LVKEFVGKNITQVACGSRDA 2796

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G  VYS G G  GKLG G       P+ +E+  L+  + V +  GA  +  +
Sbjct: 2797 QTLALDSEG-NVYSWGDGDFGKLGRGGSDGCCTPQKVER--LVGHRVVQIECGAQFSVAL 2853

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
               G+V TWG G Y  LG G  E    P +V  L  V   H+A G      VS  GDVY 
Sbjct: 2854 TATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYC 2913

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G G  +AN   P+LVT+   +    V    + SI W      L 
Sbjct: 2914 WGDNDHGQ-------QGNGTTNANQ-EPRLVTNFNNIKINRVGCGSSQSIAWKCPVLPLL 2965

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             S +   F    K  +G   +N   E
Sbjct: 2966 MSHEHVQF-TRIKDSMGATALNENVE 2990



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 10/255 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK  L  R  +  P   +SL    II  A G   +  IS  G +Y +GK  +G   +G 
Sbjct: 3662 DGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGD 3721

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
                L   P+LV+ L N  VV+ A G  +  T  ++ +  V+++  G+  +LGH+   + 
Sbjct: 3722 YEDYLY--PKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESC 3779

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L    ++QI  G  + +AL+   +   +Y+ G G   +LGHGS    + P+
Sbjct: 3780 KLPCKI-ESLSGKGIIQIDCGSQFSVALS---ANGTLYTWGKGDYFRLGHGSSEHVRKPK 3835

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             +   Q    + V  + G+ H   +  DG V  WG    G LG G     + P+ + AL 
Sbjct: 3836 PVSGLQ--GKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALK 3893

Query: 262  DVKAIHVATGDYTTF 276
              +   V+ G   +F
Sbjct: 3894 GKRIQQVSCGSAHSF 3908



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 19/192 (9%)

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
            S  AVY  G    G+LG  + +  K P   E   L  L+P+ +  G+    +V  +G+V 
Sbjct: 2591 SEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEA--LTALKPIEIVGGSKSLFIVSNEGKVF 2648

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
              G    G LG       S P+ +  L+   +K + V +G      +S DG V S+G GE
Sbjct: 2649 VCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGE 2708

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
               LGH  I          + TP+L+ SL  + +RV  I+       +AH+ A+T  G+L
Sbjct: 2709 DGKLGHGDI--------LTLDTPKLIDSL--LAKRVFYIACG-----SAHSAAITSDGEL 2753

Query: 352  YAFGAGDKGQLG 363
            Y +G G  G+LG
Sbjct: 2754 YTWGQGQYGRLG 2765



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 21/175 (12%)

Query: 206  FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             Q LN +P       W+    G    V  WG    G L   +      P    +L+ +K 
Sbjct: 3525 LQWLNSKP-----DDWNMTWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKP 3579

Query: 266  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN-RHANVLTPQLVTSLKQVN 324
              V  G+ T F V+  G VY+ G  ES  LG      G  N ++  V+TPQLV  L    
Sbjct: 3580 TQVIGGEQTMFAVTSYGKVYASGYTESGRLGI-----GPYNPKNPYVVTPQLVQGLNN-- 3632

Query: 325  ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              ++++++ +      H  AL+ +G++YA+G GD G+LG+    N+     P+ V
Sbjct: 3633 --IIKVAVNSG---GRHCLALSTTGEVYAWGDGDDGKLGL---GNRVTHSKPQLV 3679



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           + ++  G+VY++G + FG   +G + +   T P+ + +   + VV  + G  F A ++ +
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPT-PEPIVAFSKLIVVMVSCGKDFCAAVTED 563

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G++Y   WG   ++ H +  N      L+ ++    V +++ G      LA    G  V+
Sbjct: 564 GKLYM--WG---KILHSS--NCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGY-VF 615

Query: 180 SVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           S       +  +  R  D+K   +I    + + + V +       AV+     V TWG G
Sbjct: 616 SF------EYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRG 669

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
               LGH N    + PK V+ L+  +   ++  D     +++ G VY +G
Sbjct: 670 NNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           + + +V    V   D T   V++ G+VYS+G  E  +LGH       G ++++  TP+ +
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGH-------GQKYSSFPTPEPI 539

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
            +  ++   VV +S            A+TE GKLY +G
Sbjct: 540 VAFSKL--IVVMVSCGKDF-----CAAVTEDGKLYMWG 570


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 225 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 282

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 283 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 341

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 342 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 398

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 399 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 458

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 459 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 507

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +    H    TE G++Y +G  D+GQLG
Sbjct: 508 L----HCVCCTEDGEVYTWGDNDEGQLG 531



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 376

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 377 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 434

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 435 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 490

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 491 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 548

Query: 262 DVKAIHVATGDYTTFVVS 279
             K   VA G   T   S
Sbjct: 549 GKKVNRVACGSAHTLAWS 566



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 19/251 (7%)

Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 250

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 251 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 309

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 310 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 369

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 370 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 416

Query: 353 AFGAGDKGQLG 363
           ++G GD G+LG
Sbjct: 417 SWGDGDYGKLG 427


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4035

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4094

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFS 4211

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4261 L----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 152/283 (53%), Gaps = 37/283 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            ++  V+++   +       + ALT+ G++Y++G GD  +LG+
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLGL 692



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LG             +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGLGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G   A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++       +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGTR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4130 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGS 4187

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4188 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4244 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4301

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4302 GKKVNRVACGSAHTLAWS 4319



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4003

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4169

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 84/139 (60%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLG  TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G    +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK        G+   + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD--NQRLGLGTEEHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L++  
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 134/239 (56%), Gaps = 9/239 (3%)

Query: 61  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
           L+S  G VY +G + FG+   G   ++L + P  +  L N+FVV A+ G   T +LS+EG
Sbjct: 7   LVSGLGDVYTWGANFFGQ--LGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKEG 63

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           +V++F  G + RLGH    N   P P+  +LE+  +  IAAG+ + +A+        +++
Sbjct: 64  KVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAI---DDDGKLFT 119

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            GCG  G+LGHG+  D   PR +++   + ++ ++ +    H+AV  ++G V TWG G +
Sbjct: 120 WGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEH 179

Query: 241 GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G LG G+ E    P +V+++ D  +  + V+ G   T  V+ DG + ++G G+   LGH
Sbjct: 180 GQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGH 238



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 22/257 (8%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G +  A++S  G VYT+      +LG         P  L   L N+ VV  + G  + L 
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSEL--HLPNVFVVSASCGGMHTLL 58

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L+ +     V+S G G  G+LGHG+  +   P+ I   +  + +   +AAG  H+  +  
Sbjct: 59  LSKEGK---VFSFGDGANGRLGHGNCRNYSLPQPIASLE--SKRITFIAAGWTHSMAIDD 113

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYT-TFVVSEDGDVYS 286
           DG++ TWG G  G LGHGN      P+ V  L  ++    +A+G Y  + V  E+G V++
Sbjct: 114 DGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWT 173

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G GE     H  +  G    H   L P LV S+   N  +V++S        AHT A+T
Sbjct: 174 WGLGE-----HGQLGVGSTESH---LEPVLVKSMADANLHIVEVSCGG-----AHTAAVT 220

Query: 347 ESGKLYAFGAGDKGQLG 363
             G L  +G GD GQLG
Sbjct: 221 NDGTLLTWGRGDWGQLG 237



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY+ G    G+LG   R   +   L  +  L N+  V  + G  H  ++ ++G+V ++G 
Sbjct: 14  VYTWGANFFGQLG---RDYSRLWSLPSELHLPNVFVVSASCGGMHTLLLSKEGKVFSFGD 70

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G  G LGHGN    S+P+ + +L   +   +A G   +  + +DG ++++GCG +  LGH
Sbjct: 71  GANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGH 130

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
             + D        V  P+ V  L ++  + +  S +       H+    E+G ++ +G G
Sbjct: 131 GNVLD--------VWRPRFVDRLYRIRMKAMMASGSYD-----HSAVCCENGTVWTWGLG 177

Query: 358 DKGQLGIELVNNQTE 372
           + GQLG+    +  E
Sbjct: 178 EHGQLGVGSTESHLE 192


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G    + ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3728 PTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3785

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3786 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3844

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3845 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 3901

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3902 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3961

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3962 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4010

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4011 L----HCVCCTEDGEVYTWGDNDEGQLG 4034



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2718 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2776

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2777 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2835

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 2836 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 2891

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2892 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2949

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2950 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3001

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3002 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3042



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 158/332 (47%), Gaps = 41/332 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C+ L  + + Q A    R +++   G+V   A+  D+                PQLV
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTL--------------VPQLV 464

Query: 96  ESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLG 149
           + L +  VV+ A    G+ + A L+  G VY++  G+  RLGH       EP       G
Sbjct: 465 QGLASRNVVKIAAHSDGHHYLA-LAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSG 523

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
                 VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L
Sbjct: 524 KQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V 
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 640

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ 
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVID 690

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           ++  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 691 VAAGST-----HCLALTEDSEVHSWGSNDQCQ 717



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   + L N+ V Q A       ++ R GRV T ++ +D  +             L+
Sbjct: 416 VIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTLVPQ-----------LV 464

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  VV+IAA   G+ YL ALA   +   VYS GCG G +LGHG     + P++I  
Sbjct: 465 QGLASRNVVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGRRLGHGDTVPLEEPKVISA 520

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 521 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 580

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 581 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 632

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 633 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 667



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2710 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2766

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2767 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2826

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2827 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 2885

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2886 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2933

Query: 359  KGQLG 363
             G+LG
Sbjct: 2934 FGKLG 2938



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3820 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3879

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3880 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3937

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3938 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3993

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3994 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4051

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4052 GKKVNRVACGSAHTLAWS 4069



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   LLA+   
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLLAVT-- 3753

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3754 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3812

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3813 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3872

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3873 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3919

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3920 SWGDGDYGKLG 3930



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 566 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 623

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 624 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 682

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 683 LQGKKVIDVAAGSTHCLAL 701



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2894 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 2951

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2952 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3010

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3011 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3059



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 624 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 681

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 682 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 739

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 740 IVGIACG 746


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
           [Equus caballus]
          Length = 4840

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E+VP +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3982 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4039

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4040 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4098

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4099 LVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4155

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4156 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4215

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4216 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4264

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4265 L----HCVCCTEDGEVYTWGDNDEGQLG 4288



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 168/330 (50%), Gaps = 26/330 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P +  +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +
Sbjct: 2987 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQVTA 3045

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L +  V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKR 3104

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + + 
Sbjct: 3105 IRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQ 3159

Query: 216  VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            VA G+  A  +    +G V +WG G +G LG G  E  ++P+ ++ LN      +  G  
Sbjct: 3160 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++ 
Sbjct: 3220 FSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVG 3269

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   H  A+T++G++YA+G  D GQ G
Sbjct: 3270 -----ALHCLAVTDAGQVYAWGDNDHGQQG 3294



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 20/281 (7%)

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
            G   +  P   E+L  + VVQ A G+     ++ EG+VY      + RLG       V  
Sbjct: 2980 GLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI 3039

Query: 145  HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
               +  L +  V ++A       A A    G  V+S G G  GKLGH SR +   PRLIE
Sbjct: 3040 PRQVTALSSYVVKKVAVHSGGRHATALTVDG-KVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098

Query: 205  QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              +   ++   +A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ L   +
Sbjct: 3099 ALKTKRIRD--IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 3156

Query: 265  AIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
             I VA G  D  T  ++++G V+S+G G+   LG        G+   N+  PQ +  L  
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNIERLN- 3207

Query: 323  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              + V QI           + ALT+SG ++ +G GD  +LG
Sbjct: 3208 -GQGVCQIECGAQF-----SLALTKSGVVWTWGKGDYFRLG 3242



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 18/300 (6%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G      ++  G+V+++G+   G+   G         P+L+E+LK   +   
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDI 3108

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G    
Sbjct: 3109 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDA 3167

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 225
              LA    G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  
Sbjct: 3168 QTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLA 3223

Query: 226  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
            + + G V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY
Sbjct: 3224 LTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVY 3283

Query: 286  SFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            ++G  +            QGN    V   P LV  L+      V    ++S+ W     A
Sbjct: 3284 AWGDNDHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMA 3334



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4133

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4134 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4191

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4192 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4247

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4248 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQ 4305

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4306 GKKVNRVACGSAHTLAWS 4323



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4007

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4008 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4066

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4067 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRY 4126

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4127 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4173

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4174 SWGDGDYGKLG 4184



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3263 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3317

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3318 VACGSSHS 3325



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +  G W    VGQ G V T   G   C G G  + + VP   + L+ +  + VA G  + 
Sbjct: 2954 IQRGPWTPFGVGQ-GAVST---GSLCCDGVGLSQIK-VPSFSETLSALNVVQVAGGSKSL 3008

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            F V+ +G VY+ G   +  L       G G     V  P+ VT+L     + V +     
Sbjct: 3009 FAVTVEGKVYACGEATNGRL-------GLGISSGTVPIPRQVTALSSYVVKKVAVHSGGR 3061

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 H  ALT  GK++++G GD G+LG
Sbjct: 3062 -----HATALTVDGKVFSWGEGDDGKLG 3084


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V+SP L+ES
Sbjct: 3916 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSSPTLLES 3973

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH +      P  ++ +L  + 
Sbjct: 3974 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPR-VIESLRGVE 4032

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4033 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4089

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4090 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4149

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4150 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4198

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4199 L----HCVCCTEDGEVYTWGDNDEGQLG 4222



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2906 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2964

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2965 GLGI-SSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3023

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3024 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3079

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  +VP+
Sbjct: 3080 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQ 3137

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3138 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3189

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3190 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3230



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 138/282 (48%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR G VYT ++ +D           + P  L+
Sbjct: 370 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDT----------LAPQ-LV 418

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 419 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 474

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G Y  L HG      +  ++  L+  
Sbjct: 475 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQ 534

Query: 264 KAIHVATGDY--TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I+ + G     T    E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 535 KFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 586

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 587 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 621



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 43/333 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G VY  A+  D+               +PQLV
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTL--------------APQLV 418

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 419 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 478

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G   +L HG      +  LI    L  
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYXRLDHGRSA--MNEILIMISGLDR 533

Query: 211 LQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            + +  + G   A  +   ++G+V +WG G YG LG G  +    PK+++ L D+  + V
Sbjct: 534 QKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKV 593

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
             G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+
Sbjct: 594 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVI 643

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
            ++  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 644 DVAAGST-----HCLALTEDSEVHSWGSNDQCQ 671



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2898 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2954

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2955 ACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3015 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3073

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3074 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3121

Query: 359  KGQLG 363
             G+LG
Sbjct: 3122 FGKLG 3126



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G+ ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4067

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4068 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4125

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4126 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4181

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4182 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4239

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4240 GKKVNRVACGSAHTLAWS 4257



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3941

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3942 -ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4000

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHG+      P+V+++L  V+ + VA G   +  V+  GD+Y++G G  
Sbjct: 4001 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4060

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4061 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4107

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4108 SWGDGDYGKLG 4118



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3082 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNI 3139

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3140 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3198

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3199 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3247



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 578 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 635

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 636 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 693

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 694 IVGIACG 700


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 781  PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 838

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 839  IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 897

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 898  VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 954

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 955  CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 1014

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 1015 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 1063

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 1064 L----HCVCCTEDGEVYTWGDNDEGQLG 1087



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 873  DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 932

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 933  SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 990

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 991  KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 1046

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 1047 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 1104

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 1105 GKKVNRVACGSAHTLAWS 1122



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 806

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 807 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 865

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 866 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 925

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 926 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 972

Query: 353 AFGAGDKGQLG 363
           ++G GD G+LG
Sbjct: 973 SWGDGDYGKLG 983



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 24/171 (14%)

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           PRLIE  +   ++ +  A G+ H+A +   G + TWG G YG LGHG+   +  PK+V+ 
Sbjct: 6   PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 63

Query: 260 LNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           L   + I VA G  D  T  ++++G V+S+G G+   LG        G+   N+  PQ +
Sbjct: 64  LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------GSEGCNI--PQNI 115

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESG-----KLYAFGAGDKGQLG 363
             L    + V QI           + ALT+SG     ++YA+G  D GQ G
Sbjct: 116 ERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWQVYAWGDNDHGQQG 159



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 11/186 (5%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+L+E+LK   +   A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVL 64

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               V+Q+A G      LA    G+ V+S G G  GKLG G       P+ IE+   LN 
Sbjct: 65  LGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNG 120

Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTW---GWG--RYGCLGHGNEECESVPKVVQALNDVKA 265
           Q V  +  GA  +  + + G V TW    WG   +G  G+G       P +VQ L   K 
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180

Query: 266 IHVATG 271
             VA G
Sbjct: 181 TRVACG 186



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 58  PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 115

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYT---FSWGND--ARLGHHTEPNDVEPHPLLGT 150
           E L    V Q   G  F+  L++ G V+T   ++WG++   + G+ T   + +P  L+  
Sbjct: 116 ERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKP-TLVQG 174

Query: 151 LENIPVVQIAAGYCYLLA 168
           LE   + ++A G  + +A
Sbjct: 175 LEGQKITRVACGSSHSVA 192


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 1013 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 1070

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 1071 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPR-VIESLRGIE 1129

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 1130 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 1186

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 1187 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 1246

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 1247 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 1295

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 1296 L----HCVCCTEDGEVYTWGDNDEGQLG 1319



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2   LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
             G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 61  GLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 119

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 120 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 175

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
             P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 176 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 233

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 234 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 285

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 286 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 326



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 18/295 (6%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           ++ +   +G      ++  G+V+++G+   G+   G         P+L+E+LK   +   
Sbjct: 83  VKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDI 140

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G    
Sbjct: 141 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDA 199

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 225
             LA    G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  
Sbjct: 200 QTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLA 255

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + + G V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY
Sbjct: 256 LTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY 315

Query: 286 SFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWN 339
           ++G  +            QGN    V   P LV  L+      V    ++S+ W 
Sbjct: 316 AWGDNDHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 23   RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
            ++GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   + 
Sbjct: 1104 KDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 1163

Query: 83   VQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
                +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG      
Sbjct: 1164 DSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1221

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
               P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + P
Sbjct: 1222 CKVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRP 1277

Query: 201  RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            R ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL
Sbjct: 1278 RQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 1335

Query: 261  NDVKAIHVATGDYTTFVVS 279
               K   VA G   T   S
Sbjct: 1336 QGKKVNRVACGSAHTLAWS 1354



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 1040

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                 +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 1041 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG  + G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 1098 YSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1157

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 1158 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 1204

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 1205 SWGDGDYGKLG 1215



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 10/188 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 178 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 235

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 236 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 294

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 295 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 349

Query: 216 VAAGAWHA 223
           VA G+ H+
Sbjct: 350 VACGSSHS 357


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3989 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4046

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L    
Sbjct: 4047 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGTE 4105

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E  Q   +  + 
Sbjct: 4106 VVDIAAGGAHS---ACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4162

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  V    V  G   +
Sbjct: 4163 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFS 4222

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4223 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4271

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4272 L----HCVCCTEDGEVYTWGDNDEGQLG 4295



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C +L  + + Q A      +++S  G++Y  A+  ++ G              PQLV
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNTLG--------------PQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         LS    ++++  G+  RLGH    +  EP     L G 
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                V+ IA G  Y  A+    +   +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 548 QTGKQVIHIACGSTYSAAIT---ADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+++  L+   ++VV +
Sbjct: 665 GSQFSIAITKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKIMNGLQ--GKKVVDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           ++ ++     H  ALTESG++Y++G+ D+ Q
Sbjct: 715 AVGST-----HCLALTESGEVYSWGSNDQCQ 740



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 148/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V+ P   E+L N+ V Q A       +LSR G++YT ++ N          N + P  L+
Sbjct: 439 VSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN----------NTLGPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G  YL   A       ++S GCG GG+LGHG     + P+L+  
Sbjct: 488 QGLASRNIVKIAAHPDGQHYLALSATS----ELFSWGCGDGGRLGHGDTVSLEEPKLVSA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +    Q + +A G+ ++A +  DG + TWG G YG LGHG+ E ++VP +V  L  +
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K + V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  +V++   +       + A+T+ G++Y++G GD  +LG
Sbjct: 656 DLD--IVKVRCGSQF-----SIAITKDGQVYSWGKGDNQRLG 690



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 167/351 (47%), Gaps = 26/351 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2970 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRL 3028

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3029 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3087

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3088 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3143

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3144 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3201

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++   +                + N L   
Sbjct: 3202 NIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCL--------AVXFYYXNYL--- 3250

Query: 316  LVTSLKQVNERVV---QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            L   L +V+ R V   Q   T + Y+  +   +  S K+YA+G  D GQ G
Sbjct: 3251 LELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQG 3301



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 22/264 (8%)

Query: 102  FVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
            FV +   G   TA +    R   F WG ND       + + ++      TL  + VVQ+A
Sbjct: 2947 FVRKKTAGLESTATI----RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002

Query: 161  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             G   L A+  +     VY+ G    G+LG G S      PR I       ++ V V +G
Sbjct: 3003 GGSKSLFAVTAEGK---VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
              HA  +  DG+V +WG G  G LGH +      P++++AL   +   +A G   +  ++
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
              G++Y++G GE   LGH          +   L P++V  L  +  RV+Q++  +    +
Sbjct: 3120 SSGELYTWGLGEYGRLGH--------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---D 3166

Query: 340  AHTFALTESGKLYAFGAGDKGQLG 363
            A T ALT+ G ++++G GD G+LG
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG 3190



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G  ++  AAG   +  I+ AG++Y +GK  +G   +G    +L   P+LVE+
Sbjct: 4095 PRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL--KPKLVEA 4152

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4153 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGVG 4211

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V ++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4212 VTKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4266

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4267 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4326

Query: 276  FVVS 279
               S
Sbjct: 4327 LAWS 4330



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4014

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4015 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L   + + +A G   +  ++  G++Y++G G  
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRY 4133

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4134 GRLGHGDSEDQ--------LKPKLVEALQ--GYRVIDIACGSG---DAQTLCLTDDDTVW 4180

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4181 SWGDGDYGKLG 4191



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + I++   G+  ++ I+  GQVY++GK       +G +  + V  P+++ 
Sbjct: 647 TPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTE--EHVRYPKIMN 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   VV  A+G+     L+  G VY  SWG++ +  H       +P P +L  L++  
Sbjct: 705 GLQGKKVVDVAVGSTHCLALTESGEVY--SWGSNDQCQHFDTLRIAKPVPSVLPGLDSKH 762

Query: 156 VVQIAAG 162
           +V I+ G
Sbjct: 763 IVGISCG 769



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%)

Query: 254 PKVVQALNDVKAIHVAT---GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           P++VQ L     + +A    G +    +S   +++S+GCG+   LGH            +
Sbjct: 484 PQLVQGLASRNIVKIAAHPDGQHY-LALSATSELFSWGCGDGGRLGHGDTV--------S 534

Query: 311 VLTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
           +  P+LV++L  KQ  ++V+ I+  ++     ++ A+T  G+LY +G G+ G+LG     
Sbjct: 535 LEEPKLVSALSGKQTGKQVIHIACGST-----YSAAITADGELYTWGRGNYGRLGHGSSE 589

Query: 369 NQT 371
           +QT
Sbjct: 590 DQT 592


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 636 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 684

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 685 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 740

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 741 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 800

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 801 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 852

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 853 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 887



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 684

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 685 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 744

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 745 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 801

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 802 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 861

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 862 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 911

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 912 AAGST-----HCLALTEDSEVHSWGSNDQCQ 937



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 786 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 843

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 844 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 902

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 903 LQGKKVIDVAAGSTHCLAL 921



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 844 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 901

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 902 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 959

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 960 IVGIACG 966


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 10/266 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+L G  I++ A G   T+ ++D G++++FG++  G+   G     ++  PQ VES
Sbjct: 110 PQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL--PQPVES 167

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   V   A G   +   +  G V+ + WG    LG     +   P  + G LE + V 
Sbjct: 168 LRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVT 226

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ +  ++A   +G AVY+ G    G+LGHG   D+  P+ +E    L    +V+ 
Sbjct: 227 SVACGWRH--SIAADETG-AVYTFGWSKYGQLGHGDCIDQLVPKAVES---LKDSRIVLI 280

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AG W H +     G++ +WGW ++G LG G+    + P  VQ LN      ++ G   TF
Sbjct: 281 AGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTF 340

Query: 277 VVSEDGDVYSFGCGESASLGHNAIAD 302
            V+E GDV+S+G G +  LGHN   D
Sbjct: 341 AVTEAGDVFSWGRGVNGQLGHNEPKD 366



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 26/327 (7%)

Query: 40  YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
           +  ++  +R+   + G+  ++ +   G   ++G+   G+  +G    +    P+ +  L 
Sbjct: 7   FRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEER--KKPRAIFHLM 64

Query: 100 NIFVVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVV 157
                    G  ++  LS+    VY++ WG+  RLGH  + NDV  P P+   L    +V
Sbjct: 65  QASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGH-GDCNDVFIPQPIR-ALAGRNIV 122

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           ++A G  + LA+        ++S G    G+LG G+ +D   P+ +E   L   +   +A
Sbjct: 123 KVACGDTHTLAVT---DTGELFSFGRNQNGQLGLGTTSDAILPQPVES--LRGQEVTSIA 177

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G  H+      G V  WGWGRYG LG G  E   +P  V  L  VK   VA G   +  
Sbjct: 178 CGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
             E G VY+FG  +   LGH    D         L P+ V SLK  + R+V I+      
Sbjct: 238 ADETGAVYTFGWSKYGQLGHGDCID--------QLVPKAVESLK--DSRIVLIAGG---- 283

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGI 364
           W  HT A  +SGKLY++G    GQLGI
Sbjct: 284 WR-HTSAADDSGKLYSWGWNKFGQLGI 309



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 143/297 (48%), Gaps = 23/297 (7%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +VY++G   FG   +G      +  PQ + +L    +V+ A G+  T  ++  G +++F 
Sbjct: 87  EVYSWGWGDFGRLGHGDCNDVFI--PQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFG 144

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
              + +LG  T  + + P P+  +L    V  IA G  + LA     S   V++ G G  
Sbjct: 145 RNQNGQLGLGTTSDAILPQPVE-SLRGQEVTSIACGGEHSLAAT---SAGDVFAWGWGRY 200

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G LG G   D   P  +   +   ++   VA G  H+    + G V T+GW +YG LGHG
Sbjct: 201 GNLGVGPPEDRHLPSQVHGLE--GVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHG 258

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           +   + VPK V++L D + + +A G   T    + G +YS+G  +   LG  +      N
Sbjct: 259 DCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGS------N 312

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +N   P     ++ +N   V++    S  W  HTFA+TE+G ++++G G  GQLG
Sbjct: 313 TDSNAPVP-----VQGLNTSPVKLL---SCGWR-HTFAVTEAGDVFSWGRGVNGQLG 360



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 14/249 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL+G  +   A G   ++  + AG V+A+G   +G    G    + +  P  V  
Sbjct: 162 PQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHL--PSQVHG 219

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+ + V   A G   +      G VYTF W    +LGH    + + P  +  +L++  +V
Sbjct: 220 LEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIV 278

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            IA G+ +    A   SG  +YS G    G+LG GS TD   P  +   Q LN  PV + 
Sbjct: 279 LIAGGWRH--TSAADDSGK-LYSWGWNKFGQLGIGSNTDSNAPVPV---QGLNTSPVKLL 332

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN----DVKAIHVATGD 272
           +  W H   V + G V +WG G  G LGH   +  + P  +  L+     ++ + V+   
Sbjct: 333 SCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASP 392

Query: 273 YTTFVVSED 281
            TT+V   D
Sbjct: 393 LTTYVPPAD 401


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 163/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3980 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSAPTLLES 4037

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH +      P  ++ +L  I 
Sbjct: 4038 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPR-VVESLRGIE 4096

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4097 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVA 4153

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  +++L  +  + V  G   +
Sbjct: 4154 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFS 4213

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4214 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4262

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4263 L----HCVCCTEDGEVYTWGDNDEGQLG 4286



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +   VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLE--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2969 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3027

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3028 GLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3086

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L    +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3087 RMNCDKPR-LIEALRAKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3142

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3143 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3200

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3201 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3252

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3253 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3293



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G V+++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QGGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D++ + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L    ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPRLLEGLH--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2961 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3017

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3018 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3077

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3078 DDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3136

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3137 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3184

Query: 359  KGQLG 363
             G+LG
Sbjct: 3185 FGKLG 3189



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4072 DGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4132 SEDQL--KPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4190 KVPMKI-ESLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4246 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4303

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4304 GKKVNRVACGSAHTLAWS 4321



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 84/139 (60%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPR-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L    V+ +AAG  + LAL
Sbjct: 707 LHGKKVIDVAAGSTHCLAL 725



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4005

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4006 -ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHG+      P+VV++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4065 YSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4124

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV  L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4125 GRLGHSDSEDQ--------LKPKLVEVLQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4171

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4172 SWGDGDYGKLG 4182



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3145 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3202

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3203 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3261

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3262 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3310



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPRLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L    V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLHGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 1569 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 1626

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 1627 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 1685

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 1686 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 1742

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 1743 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 1802

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 1803 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 1851

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 1852 L----HCVCCTEDGEVYTWGDNDEGQLG 1875



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 559 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 617

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
             G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 618 GLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 676

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 677 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 732

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
             P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 733 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 790

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 791 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 842

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 843 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 883



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 551 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 607

Query: 180 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 608 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 668 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 726

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                    +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 727 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 774

Query: 359 KGQLG 363
            G+LG
Sbjct: 775 FGKLG 779



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1720

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 1721 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 1778

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 1779 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 1834

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 1835 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 1892

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 1893 GKKVNRVACGSAHTLAWS 1910



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 1538 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 1594

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 1595 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1653

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 1654 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1713

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 1714 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 1760

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 1761 SWGDGDYGKLG 1771



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 10/188 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 735 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 792

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 793 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 851

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 852 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 906

Query: 216 VAAGAWHA 223
           VA G+ H+
Sbjct: 907 VACGSSHS 914


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 168/330 (50%), Gaps = 27/330 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ A G      ++  G++YA G  +      G+ GT  V++P LVES
Sbjct: 3961 PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA--GGRLGIGGTDSVSAPTLVES 4018

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+++ + + A+  G      LS +G V+++  G D +LGH    +   P  L+  L  I 
Sbjct: 4019 LQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK-LIEALSGIG 4077

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ IA G  +    AC  S   V + G G  G+LGHG   D+  P+L+E   LL  + + 
Sbjct: 4078 VIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVE--ALLGYRAID 4132

Query: 216  VAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G  
Sbjct: 4133 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQ 4192

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  ++  G VY++G G+   LGH       GN   +V  P+ V +L+   ++++ I+ T
Sbjct: 4193 FSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HVRRPKKVAALQ--GKKIISIA-T 4241

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S+    H  A ++SG+++ +G  D+GQLG
Sbjct: 4242 GSL----HCVACSDSGEVFTWGDNDEGQLG 4267



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 165/346 (47%), Gaps = 24/346 (6%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 2899 LNDKEQLGGLKGSKVK-LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGR- 2956

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V +P+ V  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2957 -LGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 3015

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                +E   L+ +L    V  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3016 RLT-LEKPKLIESLRTKRVRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQ 3071

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              P+L+   Q   +  V   +       + ++G V +WG G +G LG G  E  SVP  V
Sbjct: 3072 LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV 3131

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            + LN V  + +  G   +  +++ G+V+++G G+   LGH        ++H    TP  +
Sbjct: 3132 ERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT------DQHVRKPTP--I 3183

Query: 318  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              L+   ++V+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3184 QGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3222



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 148/311 (47%), Gaps = 23/311 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + I + A  +G    + +S  G+V+++G+   G+  +G + +     P+L+
Sbjct: 4013 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKLI 4070

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E+L  I V+  A G+  +A ++ +G V T+  G   RLGH    + ++P  L+  L    
Sbjct: 4071 EALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGYR 4129

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4130 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES--LAGLGVIK 4186

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G Y  LGHGN +    PK V AL   K I +ATG    
Sbjct: 4187 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHC 4246

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+V+++G  +   LG   +   Q         P+LV SL+   + +V++     
Sbjct: 4247 VACSDSGEVFTWGDNDEGQLGDGTVTAIQ--------RPRLVQSLQ--GKHIVKV----- 4291

Query: 336  IYWNAHTFALT 346
            I  +AHT AL+
Sbjct: 4292 ICGSAHTLALS 4302



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 141/306 (46%), Gaps = 27/306 (8%)

Query: 63  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA--VLSREG 120
           S + +++  G  S     YG        + QL+ S+         + +      V   E 
Sbjct: 474 SKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTEN 533

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
            +Y  + G      H     ++ P    G LE + VVQIAA +C    +    S   V+S
Sbjct: 534 NIYILTTGGQVFSLHSNSSENIAPKAFEG-LEGVHVVQIAA-HCEGKHVMVLSSANEVWS 591

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G G GG+LGHG    ++HP +I    L   Q   +  GA ++A +   G + TWG G Y
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMI--VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY 649

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHN 298
           G LGHGN + + VP  VQAL   K + VA  +GD  +  V+++G ++++G G+   LG+ 
Sbjct: 650 GRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGN- 708

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAG 357
                 G+ + + +  Q+ T        +V +S    IY  +  + AL+  G LY +G G
Sbjct: 709 ------GSCNGSPIPVQIDT--------LVNVS---RIYSGSQFSVALSCDGTLYTWGKG 751

Query: 358 DKGQLG 363
             G+LG
Sbjct: 752 HGGRLG 757



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 34/341 (9%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG   L+G     +         +++ Q A       +++  GQV++   +S        
Sbjct: 500 NGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSLHSNSSEN----- 554

Query: 84  QGTKLVTSPQLVESLKNIFVVQAA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
                  +P+  E L+ + VVQ A         VLS    V+++  G+  RLGH    + 
Sbjct: 555 ------IAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSK 608

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  ++G  E     Q+   YC     A       +++ G G  G+LGHG+  D+  P 
Sbjct: 609 EHPTMIVGLHEK----QVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPT 664

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  +   +  V + +G  H+  V  +G +  WG G +G LG+G+  C   P  VQ   
Sbjct: 665 QVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS--CNGSPIPVQIDT 722

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            V    + +G   +  +S DG +Y++G G    LGH        + H+NV  P+LV +L+
Sbjct: 723 LVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHG------NSEHSNV--PKLVRALE 774

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
              +++  +++      +AH  ALT SG+LY +G  D  Q+
Sbjct: 775 --GKKIADVAVG-----SAHCLALTSSGELYGWGRNDYQQI 808



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 117/241 (48%), Gaps = 19/241 (7%)

Query: 125  FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            F WG++ R  LG         P P    L  +  +QIA G   L A+   P G  +Y+ G
Sbjct: 3940 FGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 3995

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G GG+LG G       P L+E  Q + ++ V V +G  H   +  DG V +WG G  G 
Sbjct: 3996 YGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4055

Query: 243  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            LGHGN +    PK+++AL+ +  I +A G   +  ++  G V ++G G    LGH    D
Sbjct: 4056 LGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4115

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                     L P+LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+L
Sbjct: 4116 Q--------LQPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKL 4162

Query: 363  G 363
            G
Sbjct: 4163 G 4163



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 12/237 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+  R+   A G+  +  I+ +G++Y +G   +G   +G   T+L   P+LV +
Sbjct: 3022 PKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTT 3079

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   VVQ A G  +  T  L+ EG V+++  G+  +LG         PH +   L ++ 
Sbjct: 3080 LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV-ERLNSVG 3138

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+QI  G  + LAL    SG  V++ G G   +LGHG+   ++H R     Q L  + V+
Sbjct: 3139 VMQIECGAQFSLALT--KSG-EVWTWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVI 3192

Query: 216  -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             VA GA H   V   G+V  WG   +G  G GN      P +V  L+ V    VA G
Sbjct: 3193 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 153/364 (42%), Gaps = 70/364 (19%)

Query: 54  AGAGRTMLISDAGQVYAFGKDS------FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           AGA    L+    Q+ +FG  S      FG  E  +   + +T P+      N+ + QAA
Sbjct: 393 AGAPLVSLLKRYEQIESFGSYSAVDSFHFGPTESFL---RFLTLPE--NETTNVDLKQAA 447

Query: 108 I----------------GNFFTAV-LSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 148
           +                GN+ T V  S+  +++T  W + +    G  +E  +     L+
Sbjct: 448 VIIISHLDRLAKPHLPAGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQ-LM 506

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG--------LGGKLG--HGSRTDEK 198
           G++       I             PS + V  V C          GG++   H + ++  
Sbjct: 507 GSIPRYSAATIEL-----------PSTLQVRQVACTENNIYILTTGGQVFSLHSNSSENI 555

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+  E  + +++  +       H  V+     V +WG G  G LGHG+   +  P ++ 
Sbjct: 556 APKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIV 615

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L++ +   +  G   +  ++  G+++++G G    LGH    D         L P  V 
Sbjct: 616 GLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDK--------LVPTQVQ 667

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
           +LK    +VV ++L +    +AH+  +T++G L+A+G GD G+LG     N +  G+P  
Sbjct: 668 ALKSY--KVVDVALGSG---DAHSMCVTDNGLLFAWGDGDFGKLG-----NGSCNGSPIP 717

Query: 379 VDID 382
           V ID
Sbjct: 718 VQID 721



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 21/137 (15%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        +P     L+ +K IH+A G  + F+VS+DG +Y+  CG
Sbjct: 2893 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA--CG 2950

Query: 291  ESAS----LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            E  +    LGHN           NV TP+ V  L   N+ VV+    +S     H  ALT
Sbjct: 2951 EGTNGRLGLGHN----------NNVPTPRQVPIL---NQYVVKKVAVHS--GGKHAMALT 2995

Query: 347  ESGKLYAFGAGDKGQLG 363
              GK++++G G+ G+LG
Sbjct: 2996 LDGKVFSWGEGEDGKLG 3012


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3986 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4043

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4044 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4102

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q  ++  V 
Sbjct: 4103 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVA 4159

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4160 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4219

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4220 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4268

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4269 L----HCVCCTEDGEVYTWGDNDEGQLG 4292



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2974 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3032

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3033 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3091

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3092 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3147

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3148 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3205

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3206 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3257

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3258 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3298



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2966 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3022

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3023 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3083 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3141

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3142 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3189

Query: 359  KGQLG 363
             G+LG
Sbjct: 3190 FGKLG 3194



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4137

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4138 SEDQL--KPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4195

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4196 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4251

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4252 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4309

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4310 GKKVNRVACGSAHTLAWS 4327



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4011

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4012 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4071 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4130

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+     VV ++  +    +A T  LT+   ++
Sbjct: 4131 GRLGHSDSEDQ--------LKPKLVEALQ--GHHVVDVACGSG---DAQTLCLTDDDTVW 4177

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4178 SWGDGDYGKLG 4188



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3150 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3207

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3208 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3266

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3267 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3321

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3322 VACGSSHS 3329



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
           [Pan paniscus]
          Length = 4839

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 385 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 433

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 602 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3981 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4038

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4039 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4097

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4098 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4154

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4214

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4263

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4264 L----HCVCCTEDGEVYTWGDNDEGQLG 4287



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 433

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 434 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 610

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 660

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 661 AAGST-----HCLALTEDSEVHSWGSNDQCQ 686



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2971 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3029

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3030 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3088

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3089 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3144

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3145 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3202

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3203 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3254

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3255 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3295



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2963 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3019

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3020 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3079

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3080 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3138

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3139 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3186

Query: 359  KGQLG 363
             G+LG
Sbjct: 3187 FGKLG 3191



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4132

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4133 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4190

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4191 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4247 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4304

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4305 GKKVNRVACGSAHTLAWS 4322



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4006

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4007 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4125

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4126 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4172

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4173 SWGDGDYGKLG 4183



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 535 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 592

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 593 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 651

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 652 LQGKKVIDVAAGSTHCLAL 670



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3147 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3204

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3205 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3263

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3264 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3312



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 593 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 650

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 651 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 708

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 709 IVGIACG 715


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4036

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4037 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4095

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q  ++  V 
Sbjct: 4096 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVA 4152

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4153 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4212

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4213 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4261

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4262 L----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3291



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4131 SEDQL--KPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4189 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4245 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4302

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4303 GKKVNRVACGSAHTLAWS 4320



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+     VV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHHVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3260 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3314

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3315 VACGSSHS 3322



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2959 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3017

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3018 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3076

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3077 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3132

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3133 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3190

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3191 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3242

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3243 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3283



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 21/280 (7%)

Query: 86   TKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
            T+ V++P L+ES++++F+ + A+  G      LS EG VY++    D +LGH        
Sbjct: 3964 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR 4023

Query: 144  PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            P  ++ +L  I VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+
Sbjct: 4024 PR-VIESLRGIEVVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 4079

Query: 204  EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            E  Q   +  +   +G      +  D  V +WG G YG LG G  +   VP  + +L  +
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
              + V  G   +  +++ G VY++G G+   LGH +          +V  P+ V  L+  
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ-- 4189

Query: 324  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4190 GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4224



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2951 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3007

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3008 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3067

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3068 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3126

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3127 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3174

Query: 359  KGQLG 363
             G+LG
Sbjct: 3175 FGKLG 3179



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4010 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4069

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4070 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4127

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4128 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4183

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4184 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4241

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4242 GKKVNRVACGSAHTLAWS 4259



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3135 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3192

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3193 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3251

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3252 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3300



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 247 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 304

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 305 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 363

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 364 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 420

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 421 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 480

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 481 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 529

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +    H    TE G++Y +G  D+GQLG
Sbjct: 530 L----HCVCCTEDGEVYTWGDNDEGQLG 553



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 339 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 398

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 399 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 456

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 457 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 512

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 513 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 570

Query: 262 DVKAIHVATGDYTTFVVS 279
             K   VA G   T   S
Sbjct: 571 GKKVNRVACGSAHTLAWS 588



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVTAD 274

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 275 GK---LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 331

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 332 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 391

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 392 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 438

Query: 353 AFGAGDKGQLG 363
           ++G GD G+LG
Sbjct: 439 SWGDGDYGKLG 449


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 165/328 (50%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G    + ++  G+VYA           G+ GT  + +P L+ES
Sbjct: 3992 PTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA--TGYGAGGRLGLGGTDTILTPTLLES 4049

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            +++IF+ + A+  G      LS +G+VY++  G+D +LGH  + N  +   L+  L+   
Sbjct: 4050 IQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNK-NGCDHPQLIDALQGKE 4108

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V IA G  +  A+    +G  +Y+ G G  G+LGHG   D+  P+L+E      +  + 
Sbjct: 4109 IVDIACGGAHSAAVT---AGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIA 4165

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   +P  +++L  +  + V  G   +
Sbjct: 4166 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFS 4225

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH +    +  RH     P+ + +L+   ++++ I+ T S
Sbjct: 4226 VALTRSGSVYTWGKGDYHRLGHGS---DEHVRH-----PKKIAALQ--GKKIICIA-TGS 4274

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H  A ++ G+++ +G  D+GQLG
Sbjct: 4275 L----HCVACSDLGEVFTWGDNDEGQLG 4298



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 172/348 (49%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G +V   P+Y  SL  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 2992 LNDKDQLGGLKGSKVK-VPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGR- 3049

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V +P  + SL    + + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3050 -LGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDN 3108

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +   P  ++  L++  +  IA G  +  A++   S   +++ G G  G+LGHG    +
Sbjct: 3109 RLSLDRPK-MIEALKSKRIRDIACGSSHSAAIS---STGELFTWGLGEYGRLGHGDNLTQ 3164

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL    V VA G+  A  +    +G V +WG G +G LG G  E   +P 
Sbjct: 3165 LRPKLVK--ALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPH 3222

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN +    +  G   +  +++ G VY++G G+   LGH +      ++H  V  P 
Sbjct: 3223 NIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGS------DQH--VRKPT 3274

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV SL +  +++V +++        H    T+ G++YA+G  D GQ G
Sbjct: 3275 LVESLSE--KKIVHVAVG-----ALHCLCATDQGQVYAWGDNDHGQQG 3315



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 157/303 (51%), Gaps = 27/303 (8%)

Query: 65   AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            +G +Y +G +  G+   GV+G K V  P   E+L  +  VQ   G      ++ +G+VY 
Sbjct: 3967 SGTIYGWGHNHRGQLG-GVEGPK-VKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA 4024

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA--AGYCYLLALACQPSGMAVYSVG 182
              +G   RLG       + P  LL ++++I + ++A  +G  + LAL+   +   VYS G
Sbjct: 4025 TGYGAGGRLGLGGTDTILTP-TLLESIQHIFIKKVAVNSGGKHCLALS---TDGKVYSWG 4080

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G  GKLGHG++    HP+LI+  Q    + V +A G  H+A V   G + TWG GRYG 
Sbjct: 4081 EGDDGKLGHGNKNGCDHPQLIDALQ--GKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR 4138

Query: 243  LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            LGHG+ E +  PK+V+ L   K I +A  +GD  T  +++D +V+S+G G+   LG    
Sbjct: 4139 LGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG- 4197

Query: 301  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
            +DG          P  + SL  +   VV++   +       + ALT SG +Y +G GD  
Sbjct: 4198 SDG-------CKIPMKIESLAGLG--VVKVECGSQF-----SVALTRSGSVYTWGKGDYH 4243

Query: 361  QLG 363
            +LG
Sbjct: 4244 RLG 4246



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 19/317 (5%)

Query: 36   GTPLYCRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
             TP    SL    I+ +   +G    M ++  G+V+++G+   G+   G      +  P+
Sbjct: 3059 ATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK--LGHDNRLSLDRPK 3116

Query: 94   LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            ++E+LK+  +   A G+  +A +S  G ++T+  G   RLGH      + P  L+  L  
Sbjct: 3117 MIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPK-LVKALLG 3175

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              +VQ+A G      LA    G+ V+S G G  GKLG G       P  IE+   L +  
Sbjct: 3176 HHIVQVACGSRDAQTLALSAEGL-VFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGV-- 3232

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++  GA  +  + + G+V TWG G Y  LGHG+++    P +V++L++ K +HVA G  
Sbjct: 3233 CMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGAL 3292

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
                 ++ G VY++G  +    G+  I     NR      P LV +L+ V    V    +
Sbjct: 3293 HCLCATDQGQVYAWGDNDHGQQGNGTIL---VNRK-----PSLVLNLEGVRVNRVACGSS 3344

Query: 334  NSIYW---NAHTFALTE 347
            +SI W   + H   +TE
Sbjct: 3345 HSIAWTTSDTHAPNMTE 3361



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 33/342 (9%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           ++  +P  C S++ + + Q        ++++  G+VY     S  +             P
Sbjct: 463 DLGTSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQC------------P 510

Query: 93  QLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           + +E    K I  + A      +  LS +G VY++  G+  RLGH    +  +P  +   
Sbjct: 511 EQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKI-TE 569

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L    V+ I+ G  Y  A+    S   VY+ G G  G+LGHG+  D   P L+   +   
Sbjct: 570 LVGKNVIHISCGATYSAAVT---SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYF 626

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  +   +G      V   G V +WG G YG LG G  +    PK+++ L D++   V  
Sbjct: 627 IVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYC 686

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++ G VY++G G++  LGH +          +V  P+LV  L   N + ++ 
Sbjct: 687 GSQFSLALTKSGSVYTWGKGDNHRLGHGS--------ENHVRFPKLVEGL---NGKCIKK 735

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
               S     H  ALT+ G++Y +G  D GQ+G     N +E
Sbjct: 736 VAVGS----GHVLALTDDGEVYGWGRNDNGQVGETSETNVSE 773



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 22/204 (10%)

Query: 178  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
            +Y+ G G  G+LG G   +   P  +       ++ V V +G  HA  +  DG+V +WG 
Sbjct: 3039 LYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGE 3098

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G  G LGH N      PK+++AL   +   +A G   +  +S  G+++++G GE   LGH
Sbjct: 3099 GEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                      +   L P+LV +L  +   +VQ++  +    +A T AL+  G ++++G G
Sbjct: 3159 --------GDNLTQLRPKLVKAL--LGHHIVQVACGSR---DAQTLALSAEGLVFSWGDG 3205

Query: 358  DKGQLGIELVNNQTERGNPERVDI 381
            D G+LG         RG  E  DI
Sbjct: 3206 DFGKLG---------RGGSEGCDI 3220



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 11/258 (4%)

Query: 18  DIINERNGKRNLLGREVNGT---PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 74
           D+ +  NG    LG   N +   P     L G  +I  + GA  +  ++ +G+VY +G+ 
Sbjct: 541 DVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRG 600

Query: 75  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           ++G   +G       T P LV  LK+ F+V  A G+     L+       FSWG+     
Sbjct: 601 NYGRLGHGTSEDH--TVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGK 658

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGS 193
             T  +D    P L  +E +  +++A  YC    +LA   SG +VY+ G G   +LGHGS
Sbjct: 659 LGTGGSDGSKTPKL--IEKLQDIEVARVYCGSQFSLALTKSG-SVYTWGKGDNHRLGHGS 715

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
               + P+L+E      ++ V V +G  H   +  DG V  WG    G +G  +E   S 
Sbjct: 716 ENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVGETSETNVSE 773

Query: 254 PKVVQALNDVKAIHVATG 271
           P ++  L     + +  G
Sbjct: 774 PTLLTLLQGKNIVDIDCG 791



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 26/258 (10%)

Query: 116  LSREGRVYTFSWGNDARL---GHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            L+R+   +T +WG    +   GH+        E   V+       L  +  VQ+  G   
Sbjct: 3953 LNRKPEDWTLTWGGSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQT 4012

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LLA+    S   VY+ G G GG+LG G       P L+E  Q + ++ V V +G  H   
Sbjct: 4013 LLAVT---SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLA 4069

Query: 226  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
            +  DG+V +WG G  G LGHGN+     P+++ AL   + + +A G   +  V+  G++Y
Sbjct: 4070 LSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIY 4129

Query: 286  SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
            ++G G    LGH    D         + P+LV +L  +  +V+ I+  +    +A T  +
Sbjct: 4130 TWGKGRYGRLGHGDSEDQ--------MKPKLVETL--IGFKVIDIACGSG---DAQTLCI 4176

Query: 346  TESGKLYAFGAGDKGQLG 363
            T+   ++++G GD G+LG
Sbjct: 4177 TDDDNVWSWGDGDYGKLG 4194



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 10/267 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  I+  A G   +  ++  G++Y +GK  +G   +G    ++   P+LVE+
Sbjct: 4098 PQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM--KPKLVET 4155

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L    V+  A G  +  T  ++ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4156 LIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI-ESLAGLG 4214

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG +VY+ G G   +LGHGS    +HP+ I   Q    + + 
Sbjct: 4215 VVKVECGSQFSVALT--RSG-SVYTWGKGDYHRLGHGSDEHVRHPKKIAALQ--GKKIIC 4269

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H       G V TWG    G LG G       P++V  L       VA G   +
Sbjct: 4270 IATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHS 4329

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIAD 302
               S +    +      A + ++ + D
Sbjct: 4330 LAWSTNKSTSATHLPVDAPMEYDLVRD 4356



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 13/133 (9%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        VP   ++L  +K IH+A G  + F+VS DG +Y+ G G
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEG 3045

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
             +  LG      G  N   NV TP  +TSL   N+ V++    +S     H  ALT  GK
Sbjct: 3046 TNGRLGL-----GHSN---NVATPCQLTSL---NQYVIKKVAVHS--GGKHAMALTLDGK 3092

Query: 351  LYAFGAGDKGQLG 363
            ++++G G+ G+LG
Sbjct: 3093 VFSWGEGEDGKLG 3105


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3971 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4028

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4029 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4087

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4088 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4144

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4145 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4204

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4205 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4253

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4254 L----HCVCCTEDGEVYTWGDNDEGQLG 4277



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2961 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3019

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3020 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3078

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3079 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3134

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3135 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3192

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3193 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3244

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3245 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3285



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2953 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3009

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3010 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3069

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3070 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3128

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3129 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3176

Query: 359  KGQLG 363
             G+LG
Sbjct: 3177 FGKLG 3181



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4122

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4123 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4180

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4181 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4236

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4237 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4294

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4295 GKKVNRVACGSAHTLAWS 4312



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3996

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3997 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4055

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4056 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4115

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4116 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4162

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4163 SWGDGDYGKLG 4173



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3137 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3194

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3195 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3253

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3254 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3302



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 478

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 479 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 538

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 539 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 595

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 596 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 655

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 656 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 705

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 706 AAGST-----HCLALTEDSEVHSWGSNDQCQ 731



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 580 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 637

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 696

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 697 LQGKKVIDVAAGSTHCLAL 715



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 695

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 696 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 753

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 754 IVGIACG 760


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4036

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4037 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4095

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4096 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4152

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4153 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4212

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4213 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4261

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4262 L----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3291



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4131 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4189 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4245 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4302

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4303 GKKVNRVACGSAHTLAWS 4320



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3260 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3314

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3315 VACGSSHS 3322



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
           familiaris]
          Length = 4837

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3979 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4036

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4037 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4095

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4096 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4152

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4153 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4212

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4213 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4261

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4262 L----HCVCCTEDGEVYTWGDNDEGQLG 4285



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3291



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4131 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4189 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4245 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4302

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4303 GKKVNRVACGSAHTLAWS 4320



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4004

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3956 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4013

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4014 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4072

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4073 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4129

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4130 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4189

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4190 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4238

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4239 L----HCVCCTEDGEVYTWGDNDEGQLG 4262



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 417 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 465

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 466 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 521

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 522 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 581

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 582 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 633

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 634 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 668



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 465

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 466 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 525

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 526 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 582

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 583 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 642

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 643 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 692

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 693 AAGST-----HCLALTEDSEVHSWGSNDQCQ 718



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2944 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3002

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3003 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3061

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3062 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3117

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3118 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3175

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3176 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3227

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3228 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3268



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2936 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2992

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2993 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3052

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3053 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3111

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3112 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3159

Query: 359  KGQLG 363
             G+LG
Sbjct: 3160 FGKLG 3164



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4107

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4108 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4165

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4166 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4221

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4222 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4279

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4280 GKKVNRVACGSAHTLAWS 4297



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3981

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3982 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4040

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4041 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4100

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4101 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4147

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4148 SWGDGDYGKLG 4158



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 567 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 624

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 625 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 683

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 684 LQGKKVIDVAAGSTHCLAL 702



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3120 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3177

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3178 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3236

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3237 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3291

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3292 VACGSSHS 3299



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 625 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 682

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 683 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 740

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 741 IVGIACG 747


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pongo abelii]
          Length = 4581

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3723 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3780

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3781 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3839

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3840 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 3896

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3897 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3956

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3957 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4005

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4006 L----HCVCCTEDGEVYTWGDNDEGQLG 4029



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 170/350 (48%), Gaps = 31/350 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L  +++   P +  +L  + ++Q A G+     ++  G+VYA G+ +   A
Sbjct: 2717 LNDKDQLGGLKNKKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPA 2775

Query: 80   E-YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHH 136
               G+    +      + +L +  V + A+  G   T     +G+V+++  G+D +LGH 
Sbjct: 2776 WGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHF 2835

Query: 137  TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
            +      P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T 
Sbjct: 2836 SR----MPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTT 2887

Query: 197  EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNE-ECESV 253
            +  P++++   LL  + + VA G+  A  +    +G V + G G    +G G E +  ++
Sbjct: 2888 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNI 2945

Query: 254  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
            P+ ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  
Sbjct: 2946 PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRK 2997

Query: 314  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            PQ+V  L+   +++V  S + ++    H  A+T+SG++YA+G  D GQ G
Sbjct: 2998 PQVVEGLR--GKKIVACSCSGAL----HCLAVTDSGQVYAWGDNDHGQQG 3041



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 144/309 (46%), Gaps = 43/309 (13%)

Query: 67   QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
            +V+++G   KD  G    G++  K +  P   E+L  + VVQ A G+     ++ EG+VY
Sbjct: 2711 KVFSWGLNDKDQLG----GLKNKK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2765

Query: 124  TF-------SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
                     +WG     G  T P    PH  +  L +  VV+  A +         P   
Sbjct: 2766 ACGEATKWPAWGLGISSG--TVPI---PHGXITALSSY-VVKKVAVHSGTSQTGFXPVDG 2819

Query: 177  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
             V+S G G  GKLGH SR     PRLIE  +   ++ +  A G+ H+A +   G + TWG
Sbjct: 2820 KVFSWGEGDDGKLGHFSRM----PRLIEALKTKRIRDI--ACGSSHSAALTSSGELYTWG 2873

Query: 237  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESAS 294
             G YG LGHG+   +  PK+V+ L   + I VA G  D  T  ++++G V+S G G+   
Sbjct: 2874 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWK 2933

Query: 295  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
            +G      G      N+  PQ +  L    + V QI           + ALT+SG ++ +
Sbjct: 2934 IGPGPEVKG-----CNI--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTW 2979

Query: 355  GAGDKGQLG 363
            G GD  +LG
Sbjct: 2980 GKGDYFRLG 2988



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3874

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3875 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3932

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3933 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3988

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3989 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4046

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4047 GKKVNRVACGSAHTLAWS 4064



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3748

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3749 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3807

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3808 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3867

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3868 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3914

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3915 SWGDGDYGKLG 3925



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
           mulatta]
          Length = 4840

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 4007 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4064

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4065 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4123

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4124 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4180

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4181 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4240

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4241 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4289

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4290 L----HCVCCTEDGEVYTWGDNDEGQLG 4313



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4158

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4159 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4216

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4217 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4272

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4273 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4330

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4331 GKKVNRVACGSAHTLAWS 4348



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4032

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4033 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4091

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4092 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4151

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4152 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4198

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4199 SWGDGDYGKLG 4209



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181

Query: 359  KGQLG 363
             G+LG
Sbjct: 3182 FGKLG 3186



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      GV GT+ V++P L+ES
Sbjct: 3978 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGVGGTESVSTPTLLES 4035

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L    
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGTE 4094

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4151

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4211

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    +E G++Y +G  D+GQLG
Sbjct: 4261 L----HCVCCSEDGEVYTWGDNDEGQLG 4284



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3291



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G  ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4130 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4188 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4244 QVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4301

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4302 GKKVNRVACGSAHTLAWS 4319



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4003

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G  
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4169

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3672 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3729

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3730 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3788

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3789 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 3845

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3846 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3905

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3906 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3954

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3955 L----HCVCCTEDGEVYTWGDNDEGQLG 3978



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2662 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2720

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2721 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2779

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 2780 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 2835

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2836 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2893

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2894 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 2945

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2946 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2986



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 22/200 (11%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 442

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ YL ALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 443 QGLASRNIVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 498

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 558

Query: 264 KAIHVA--TGDYTTFVVSED 281
           K I VA  +GD  T  V+E+
Sbjct: 559 KVIDVACGSGDAQTLAVTEN 578



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2654 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2710

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2711 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2770

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2771 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 2829

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2830 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2877

Query: 359  KGQLG 363
             G+LG
Sbjct: 2878 FGKLG 2882



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3823

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3824 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3881

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3882 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3937

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3938 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3995

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 3996 GKKVNRVACGSAHTLAWS 4013



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3697

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3698 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3756

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3757 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3816

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3817 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3863

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3864 SWGDGDYGKLG 3874



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2838 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 2895

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2896 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2954

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 2955 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3009

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3010 VACGSSHS 3017



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 24/189 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 442

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 443 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 559

Query: 211 LQPVVVAAG 219
           +  V   +G
Sbjct: 560 VIDVACGSG 568



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 17/158 (10%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           +D   P+L++     N+  +   +   H   +   G V +WG G  G LGHG+      P
Sbjct: 434 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 493

Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           KV+ A +  +A    +H+A G   +  ++ +G++Y++G G    LGH +  D        
Sbjct: 494 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 547

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
              P LV  LK +  +V+ ++  +    +A T A+TE+
Sbjct: 548 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTEN 578



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ L     + +A  +  +    ++  G+VYS+GCG+   LGH      +       
Sbjct: 439 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE------- 491

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             P+++++   KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG
Sbjct: 492 -EPKVISAFSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLG 539


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 401 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 449

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 450 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 505

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 506 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 565

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 566 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 617

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 618 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 652



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 449

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 450 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 509

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 510 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 566

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 567 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 626

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 627 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 676

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 677 AAGST-----HCLALTEDSEVHSWGSNDQCQ 702



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 551 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 608

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 609 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 667

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 668 LQGKKVIDVAAGSTHCLAL 686



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 609 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 666

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 667 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 724

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 725 IVGIACG 731


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 430 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 478

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 479 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 534

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 535 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 594

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 595 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 646

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 647 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 681



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 478

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 479 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 538

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 539 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 595

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 596 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 655

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 656 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 705

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 706 AAGST-----HCLALTEDSEVHSWGSNDQCQ 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 580 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 637

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 696

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 697 LQGKKVIDVAAGSTHCLAL 715



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 695

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 696 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 753

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 754 IVGIACG 760


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3867 PTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3924

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3925 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3983

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3984 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIA 4040

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4041 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4100

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4101 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4149

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4150 L----HCVCCTEDGEVYTWGDNDEGQLG 4173



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTLPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QGGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 12/272 (4%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             ++ LN      +  G   +  +++ G V+++
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3959 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4018

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4019 SEDQL--KPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4076

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4077 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4132

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4133 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4190

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4191 GKKVNRVACGSAHTLAWS 4208



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  +Q+  G   L A+   
Sbjct: 3836 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPIQLIGGEQTLFAVT-- 3892

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3893 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3951

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3952 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4011

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV  L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4012 GRLGHSDSEDQ--------LKPKLVEVLQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4058

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4059 SWGDGDYGKLG 4069



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 40/346 (11%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SP 92
           VNG P++C+SL  + + Q        +++S +G VY              Q  K  T +P
Sbjct: 402 VNG-PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAP 447

Query: 93  QLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL- 148
            L+ SL +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  +  
Sbjct: 448 MLIHSLSSRKMVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAA 506

Query: 149 --GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
             G      VV IA G  Y  A+        +Y+ G G  G+LGHGS  D+  P L+   
Sbjct: 507 FNGKQAGKHVVHIACGSTYSAAITVDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTAL 563

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           + L +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  +
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIV 623

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            V  G   +  +++DG VY++G G++  LGH            +V  P+L+ +L+   ++
Sbjct: 624 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKK 673

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           VV +++ ++     H  ALT+ G+++++G+ DK Q    L +N+ +
Sbjct: 674 VVDVAVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQ 714



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G++YA G+ + G  
Sbjct: 2737 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRL 2795

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2796 GLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 2854

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG  T +
Sbjct: 2855 RMNCDKPR-LIEALKAKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNTTQ 2910

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2911 LRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2968

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 2969 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3020

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3021 MVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3061



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 12/331 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3781 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3838

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  + 
Sbjct: 3839 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGVE 3897

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L++  Q   +  V 
Sbjct: 3898 VVDIAAGGAHS---ACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVA 3954

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +    P  + +L  +  I V  G   +
Sbjct: 3955 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFS 4014

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +    +  R    L  + V ++   +   V  +    
Sbjct: 4015 VALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGR 4074

Query: 336  IY---WNAHTFALTESGKLYAFGAGDKGQLG 363
            I    W    ++L   G++Y +G  D+GQLG
Sbjct: 4075 IKVFQWGLPRWSLG-LGEVYTWGDNDEGQLG 4104



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     +Y
Sbjct: 2729 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---IY 2785

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2786 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2845

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 2846 DDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH- 2904

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P+LV  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2905 -------GDNTTQLRPKLVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2952

Query: 359  KGQLG 363
             G+LG
Sbjct: 2953 FGKLG 2957



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 27/272 (9%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G+ ++  AAG   +  I+ +G+++ +GK  +G   +G 
Sbjct: 3873 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD 3932

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LV++L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3933 SEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 3990

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + V+++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3991 KTPMKI-DSLTGLGVIKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4046

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-----------------VCTWGWGRYGCLG 244
             ++  Q    + + +A G+ H     +DGR                 V TWG    G LG
Sbjct: 4047 QVQGLQ--GKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLG 4104

Query: 245  HGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
             G       P++V AL   K   VA G   T 
Sbjct: 4105 DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3806

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3807 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 3866 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 3925

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 3926 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 3972

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3973 SWGDGDYGKLG 3983



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2913 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 2970

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 2971 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKK 3029

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3030 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3084

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3085 VACGSSHS 3092



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLV 95
           TP     LQ + I++   G+  ++ ++  GQVY +GK   G+ +    GT + V  P+L+
Sbjct: 610 TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK---GDNQRLGHGTDEHVRFPKLL 666

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLEN 153
           ++L+   VV  A+G+     L+ +G V+  SWG++ +L H      N  +P  L G L +
Sbjct: 667 DTLQGKKVVDVAVGSTHCLALTDDGEVH--SWGSNDKLQHFDTLFSNKKQPKALPG-LNS 723

Query: 154 IPVVQIAAG 162
             +V I+ G
Sbjct: 724 KHIVGISCG 732


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      GV GT+ V++P L+ES
Sbjct: 3977 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGVGGTESVSTPTLLES 4034

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L    
Sbjct: 4035 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGTE 4093

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4094 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4150

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4151 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4210

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4211 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4259

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    +E G++Y +G  D+GQLG
Sbjct: 4260 L----HCVCCSEDGEVYTWGDNDEGQLG 4283



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2965 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3023

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3024 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3082

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3083 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3138

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3139 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3196

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3197 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3248

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3249 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3289



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2957 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3013

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3014 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3074 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3132

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3133 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3180

Query: 359  KGQLG 363
             G+LG
Sbjct: 3181 FGKLG 3185



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G  ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4128

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4129 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4186

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4187 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4242

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4243 QVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4300

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4301 GKKVNRVACGSAHTLAWS 4318



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4002

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4003 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4061

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G  
Sbjct: 4062 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4121

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4122 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4168

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4169 SWGDGDYGKLG 4179



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3141 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3198

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3199 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3257

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3258 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3306



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      GV GT+ V++P L+ES
Sbjct: 3979 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGVGGTESVSTPTLLES 4036

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L    
Sbjct: 4037 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGTE 4095

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 4096 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4152

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4153 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4212

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4213 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4261

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    +E G++Y +G  D+GQLG
Sbjct: 4262 L----HCVCCSEDGEVYTWGDNDEGQLG 4285



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 3291



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G  ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4131 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4188

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4189 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4245 QVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4302

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4303 GKKVNRVACGSAHTLAWS 4320



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4004

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4005 -ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L   + + VA G   +  V+  GD+Y++G G  
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 4124 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 4170

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4171 SWGDGDYGKLG 4181



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 157/329 (47%), Gaps = 23/329 (6%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +  +Q   G      ++  G+VYA G  + G    G   +  V+ P L+ 
Sbjct: 3974 TPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDS--VSQPTLLA 4031

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            S++++F+ + A   G      LS +G VY++  G D +LGH    +   P  L+  L  +
Sbjct: 4032 SIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPK-LITALSGL 4090

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             VV IA G  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E      +  V
Sbjct: 4091 EVVCIACGGAHS---ACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDV 4147

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
               +G      +  D  V +WG G YG LG G  E   +P  +  L  ++ I V  G   
Sbjct: 4148 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQF 4207

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            +  + + G VY++G G+   LGH +        + +V  P  VT ++   + +V I+ T 
Sbjct: 4208 SVALCQCGSVYTWGKGDYHRLGHGS--------YEHVRRPMRVTGMQ--GKMIVSIA-TG 4256

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            S+    H  A T++G++Y +G  D+GQLG
Sbjct: 4257 SL----HCVACTDTGEVYTWGDNDEGQLG 4281



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 172/348 (49%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    + G +V   P++  +L  +R +  A G+    ++S  G+++A G+ + G  
Sbjct: 3064 LNDKDQLGGVKGSKVK-VPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGR- 3121

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V++P+    L ++ V + A+  G      L+ +G+VY++  G D +LGH  
Sbjct: 3122 -LGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGN 3180

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                  P  L+ +L    V+ IA G  +    AC  +   +Y+ G G  G+LGHG    +
Sbjct: 3181 RITLEAPR-LIESLAGERVISIACGSAHS---ACVTARGHLYTWGLGEYGRLGHGDDNIQ 3236

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD--GRVCTWGWGRYGCLGHGNEECESVPK 255
              P+++E   L N + + VA G+  A  +     G+V +WG G +G LG G  +  ++P 
Sbjct: 3237 LVPKMVEA--LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPM 3294

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             V+ LN +    V  G   +  ++ DG+V+++G G+   LGH           A+V  P 
Sbjct: 3295 NVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGC--------DAHVRRPT 3346

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV +L+    RV+ +++        H  A+T   +++A+G  D GQ G
Sbjct: 3347 LVEALR--GRRVIHVAVG-----ALHCLAVTSENQVWAWGDNDHGQQG 3387



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 8/285 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    S+Q + I + A  +G    + +S  G+VY++G+   G+  +G + +     P+L+
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVS--YDRPKLI 4084

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             +L  + VV  A G   +A L+  GR+YT+  G   RLGH    + + P  L+  L +  
Sbjct: 4085 TALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPK-LVEALSSFR 4143

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ +A G      L C      V+S G G  GKLG G     K P  I+  +   L+ + 
Sbjct: 4144 VIDVACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLK--GLRVIK 4200

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + Q G V TWG G Y  LGHG+ E    P  V  +     + +ATG    
Sbjct: 4201 VECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHC 4260

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
               ++ G+VY++G  +   LG       Q  R    L   ++ +L
Sbjct: 4261 VACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQVNIIPTL 4305



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 118/264 (44%), Gaps = 19/264 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGA-GRTMLI-SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           TP     L+   I Q +  + GR  L  S  G  +++G    G   +G   T    +PQ 
Sbjct: 513 TPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHG--DTAARDAPQP 570

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  L +  VV+ A G   +AV++  G +YT+  G   RLGH T  N + P P+     NI
Sbjct: 571 LHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNI 630

Query: 155 P-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++ +A G+     L C   G AV   G G  G            PR +    +  +  
Sbjct: 631 ERIIDVALGWGEGSTLCCTWEG-AVQVFGEGEAGT-----------PRALSALAMFRVTR 678

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V      WHAA+    G+V TWG G    LGHGN E   +PK+V+AL  +K + ++ G  
Sbjct: 679 VYTGE-HWHAALT-DGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGAS 736

Query: 274 TTFVVSEDGDVYSFGCGESASLGH 297
               +S +G ++ +G  E   + +
Sbjct: 737 HGIALSSEGVLFVWGTHERTQISN 760



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL G R+I  A G+  +  ++  G +Y +G   +G   +G    +LV  P++VE+
Sbjct: 3187 PRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLV--PKMVEA 3244

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGT 150
            L N  V+Q A G  +  T  L+  G+V+++  G+  +LG         P +VE       
Sbjct: 3245 LANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVE------R 3298

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            L ++ V Q+  G  + LAL        V++ G G   +LGHG     + P L+E  +   
Sbjct: 3299 LNSLGVTQVECGAQFSLALT---RDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALR--G 3353

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
             + + VA GA H   V  + +V  WG   +G  G+G       P +V  +  V+
Sbjct: 3354 RRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPALVAGVEGVQ 3407



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 52/273 (19%)

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +I + Q A       +L+ +G VYT  +            + + PH L+  LE+  + 
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPY------------DTMTPH-LVPGLESKTIT 526

Query: 158 QIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
           Q++    G  YL    C+ S    +S G G  G+LGHG       P+ +    L + + V
Sbjct: 527 QVSCHSLGRHYL----CRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHH--LAHHEVV 580

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATG- 271
            VAAG   +AV+   G + TWG G  G LGHG  E    P+ V   A N  + I VA G 
Sbjct: 581 RVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGW 640

Query: 272 -DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            + +T   + +G V  FG GE+                    TP+ +++L     RV ++
Sbjct: 641 GEGSTLCCTWEGAVQVFGEGEAG-------------------TPRALSALAMF--RVTRV 679

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 +W+A   ALT+ G++Y +G GD  +LG
Sbjct: 680 YTGE--HWHA---ALTDGGQVYTWGKGDGYRLG 707



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 13/133 (9%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        VP    AL+ ++ +H+A G  T F+VS DG +++ G G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
             +  LG      G  N   NV TP+    L  V  R V +          H  ALT  GK
Sbjct: 3118 TNGRLGL-----GHSN---NVSTPRANPYLSHVLVRRVAVHSGGK-----HALALTADGK 3164

Query: 351  LYAFGAGDKGQLG 363
            +Y++G G+ G+LG
Sbjct: 3165 VYSWGEGEDGKLG 3177



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK-DSFGEAEYGV 83
           G   + G    GTP    +L   R+ +   G      ++D GQVY +GK D +      +
Sbjct: 652 GAVQVFGEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNM 711

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
           + TK+   P+LVE+L+ I +V  ++G      LS EG +  F WG   R    T+ ++  
Sbjct: 712 ESTKI---PKLVEALQGIKIVDLSLGASHGIALSSEGVL--FVWGTHER----TQISNPV 762

Query: 144 PHPL 147
           P P+
Sbjct: 763 PQPV 766


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 325 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 382

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 383 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 441

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 442 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 498

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 499 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 558

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 559 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 607

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +    H    TE G++Y +G  D+GQLG
Sbjct: 608 L----HCVCCTEDGEVYTWGDNDEGQLG 631



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 417 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 476

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 477 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 534

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 535 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 590

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 591 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 648

Query: 262 DVKAIHVATGDYTTFVVS 279
             K   VA G   T   S
Sbjct: 649 GKKVNRVACGSAHTLAWS 666



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 350

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 351 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 409

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 410 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 469

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 470 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 516

Query: 353 AFGAGDKGQLG 363
           ++G GD G+LG
Sbjct: 517 SWGDGDYGKLG 527


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 63  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 281

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 99  TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 156

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T     +
Sbjct: 157 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 215

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++      A+Y+ G    G+LGHG   D   P  +E    L+   +  
Sbjct: 216 SMVACGWRHTISVSYSG---ALYTYGWSKYGQLGHGDLEDHLIPHKLEA---LSNSFISQ 269

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 270 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 329

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 330 LAVTERNNVFAWGRGTNGQLG 350



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 137 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 196

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 197 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 254

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 255 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSP-- 308

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 309 -VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4035

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4094

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4211

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4261 L----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4130 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4188 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4244 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4301

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4302 GKKVNRVACGSAHTLAWS 4319



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4003

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4169

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L++  
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3983 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4040

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4041 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4099

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4100 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4156

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4157 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4216

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4217 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4265

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4266 L----HCVCCTEDGEVYTWGDNDEGQLG 4289



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 493

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 494 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 553

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 554 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 610

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 611 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 670

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 671 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 720

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 721 AAGST-----HCLALTEDSEVHSWGSNDQCQ 746



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 445 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 493

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 494 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 549

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 550 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 609

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 610 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 661

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 662 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 696



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2972 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3030

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3031 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3089

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3090 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3145

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3146 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3203

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3204 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3255

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3256 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3296



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2964 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3020

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3021 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3081 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3139

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3140 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3187

Query: 359  KGQLG 363
             G+LG
Sbjct: 3188 FGKLG 3192



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4134

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4135 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4192

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4193 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4248

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4249 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4306

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4307 GKKVNRVACGSAHTLAWS 4324



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3952 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4008

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4009 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4067

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4068 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4127

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4128 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4174

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4175 SWGDGDYGKLG 4185



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 595 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 652

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 653 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 711

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 712 LQGKKVIDVAAGSTHCLAL 730



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3148 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3205

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3206 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3264

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3265 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3313



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 653 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 710

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L++  
Sbjct: 711 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 768

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 769 IVGIACG 775


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3980 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4037

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4038 VQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VVESLRGIE 4096

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4097 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4153

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4154 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4213

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4214 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4262

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4263 L----HCVCCTEDGEVYTWGDNDEGQLG 4286



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S +G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDAL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V Q A       +LSR GRVYT ++ +DA          + P  L+
Sbjct: 440 VIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDA----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +++IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIIKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E +P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2968 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3026

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3027 GLGL-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3085

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3086 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3141

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3142 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3199

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3200 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3251

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3252 VVEGLR--GKKIVHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3292



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2960 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3016

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3017 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3077 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3135

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3136 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3183

Query: 359  KGQLG 363
             G+LG
Sbjct: 3184 FGKLG 3188



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4132 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4189

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4190 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4246 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4303

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4304 GKKVNRVACGSAHTLAWS 4321



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 4005

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4006 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEV 4064

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+VV++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4065 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4124

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4125 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4171

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4172 SWGDGDYGKLG 4182



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3144 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3201

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3202 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3260

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3261 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3309



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPSALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4035

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4094

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4211

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4261 L----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H   LTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLVLTEDSEVHSWGSNDQCQ 741



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +   L    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P+++QAL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4130 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4188 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4244 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4301

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4302 GKKVNRVACGSAHTLAWS 4319



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4003

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4169

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 84/139 (60%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + L L
Sbjct: 707 LQGKKVIDVAAGSTHCLVL 725



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)

Query: 5    AYQVAHLSPILRP-DIINERNGKRNLLGREVNGT---PLYCRSLQGIRIIQAAAGA--GR 58
            AY  +H +P+    ++     G+   LG   N T   P   + L G R+IQ A G+   +
Sbjct: 3106 AYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165

Query: 59   TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
            T+ ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++
Sbjct: 3166 TLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223

Query: 119  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
             G V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  V
Sbjct: 3224 SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-V 3279

Query: 179  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            Y+ G    G+ G+G+ T  + P L++  +
Sbjct: 3280 YAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+    VL+ +  V+  SWG++ +  H       +P P     L++  
Sbjct: 706 GLQGKKVIDVAAGSTHCLVLTEDSEVH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3265 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3322

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3323 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3381

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 3382 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 3438

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3439 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3498

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3499 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3547

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3548 L----HCVCCTEDGEVYTWGDNDEGQLG 3571



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2255 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2313

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2314 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2372

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 2373 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 2428

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2429 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2486

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2487 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 2538

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 2539 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 2579



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2247 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2303

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2304 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2364 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 2422

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2423 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2470

Query: 359  KGQLG 363
             G+LG
Sbjct: 2471 FGKLG 2475



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3416

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3417 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3474

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3475 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3530

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 3531 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3588

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 3589 GKKVNRVACGSAHTLAWS 3606



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3234 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3290

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3291 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3349

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3350 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3409

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 3410 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 3456

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3457 SWGDGDYGKLG 3467



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2431 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 2488

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2489 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2547

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 2548 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2596


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 763 IVGIACG 769


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 4044 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4101

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4102 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4160

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4161 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4217

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4218 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4277

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4278 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4326

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4327 L----HCVCCTEDGEVYTWGDNDEGQLG 4350



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 556

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 557 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 616

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 617 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 673

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 674 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 733

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 734 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 783

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 784 AAGST-----HCLALTEDSEVHSWGSNDQCQ 809



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 508 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 556

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 557 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 612

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 613 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 672

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 673 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 724

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 725 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 759



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 3033 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3091

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3092 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3150

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3151 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3206

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3207 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3264

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3265 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3316

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3317 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3357



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 3025 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3081

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3082 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3142 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3200

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3201 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3248

Query: 359  KGQLG 363
             G+LG
Sbjct: 3249 FGKLG 3253



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4195

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4196 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4253

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4254 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4309

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4310 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4367

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4368 GKKVNRVACGSAHTLAWS 4385



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4069

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4070 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4128

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4188

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4189 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4235

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4236 SWGDGDYGKLG 4246



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 658 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 715

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 716 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 774

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 775 LQGKKVIDVAAGSTHCLAL 793



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3209 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3266

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3267 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3325

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3326 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3374



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 716 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 773

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L++  
Sbjct: 774 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 831

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 832 IVGIACG 838


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 17  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 74

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 75  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 133

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 134 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 188

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 249 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 293

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 294 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 323



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 111 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 168

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T     +
Sbjct: 169 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 227

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++      A+Y+ G    G+LGHG   D   P  +E    L+   +  
Sbjct: 228 SMVACGWRHTISVSYSG---ALYTYGWSKYGQLGHGDLEDHLIPHKLEA---LSNSFISQ 281

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 282 ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 341

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 342 LAVTERNNVFAWGRGTNGQLG 362



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 149 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 208

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 209 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 266

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 267 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 321

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 322 --QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4035

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4094

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4211

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4261 L----HCVCCTEDGEVYTWGDNDEGQLG 4284



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +     +L   P+LVE+
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEA 4141

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 4200

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4201 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4255

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4256 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315

Query: 276  FVVS 279
               S
Sbjct: 4316 LAWS 4319



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4003

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4169

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3260 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 74  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 248 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 292

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T     +
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 226

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++   SG A+Y+ G    G+LGHG   D   P  +E      +  +  
Sbjct: 227 SMVACGWRHTISVSY--SG-ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI-- 281

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 282 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 208 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 266 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 320

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 321 --QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3888 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3945

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3946 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4004

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4005 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4061

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4062 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4121

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4122 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4170

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4171 L----HCVCCTEDGEVYTWGDNDEGQLG 4194



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 350 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 398

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 399 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 454

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 455 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 514

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 566

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 567 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 601



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 398

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 399 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 458

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 515

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 516 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 575

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 576 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 625

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H   LTE  +++++G+ D+ Q
Sbjct: 626 AAGST-----HCLVLTEDSEVHSWGSNDQCQ 651



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2877 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 2935

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2936 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2994

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +   L    S   +Y+ G G  G+LGHG  T +
Sbjct: 2995 RMNCDKPR-LIQALKTKRIRDIAYGSSHSAPLT---SSGELYTWGLGEYGRLGHGDNTTQ 3050

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3051 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3108

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3109 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3160

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3161 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3201



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2869 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2925

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2926 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P+++QAL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2986 DDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGH- 3044

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3045 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3092

Query: 359  KGQLG 363
             G+LG
Sbjct: 3093 FGKLG 3097



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3980 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4039

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4040 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4097

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4098 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4153

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4154 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4211

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4212 GKKVNRVACGSAHTLAWS 4229



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3857 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3913

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3914 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3972

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3973 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4032

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4033 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4079

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4080 SWGDGDYGKLG 4090



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 84/139 (60%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 500 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 557

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 558 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 616

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + L L
Sbjct: 617 LQGKKVIDVAAGSTHCLVL 635



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 12/209 (5%)

Query: 5    AYQVAHLSPILRP-DIINERNGKRNLLGREVNGT---PLYCRSLQGIRIIQAAAGA--GR 58
            AY  +H +P+    ++     G+   LG   N T   P   + L G R+IQ A G+   +
Sbjct: 3016 AYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3075

Query: 59   TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
            T+ ++D G V+++G   FG  + G  G++    PQ +E L    V Q   G  F+  L++
Sbjct: 3076 TLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3133

Query: 119  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
             G V+T+  G+  RLGH ++ +  +P  + G L    +V +A G  + LA+    SG  V
Sbjct: 3134 SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVT--DSGQ-V 3189

Query: 179  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            Y+ G    G+ G+G+ T  + P L++  +
Sbjct: 3190 YAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3218



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 558 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 615

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+    VL+ +  V+  SWG++ +  H       +P P     L++  
Sbjct: 616 GLQGKKVIDVAAGSTHCLVLTEDSEVH--SWGSNDQCQHFDTLGVTKPEPTAFPGLDSKH 673

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 674 IVGIACG 680


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3921 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3978

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3979 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4037

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4038 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4094

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4095 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4154

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4155 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4203

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4204 L----HCVCCTEDGEVYTWGDNDEGQLG 4227



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + ++Q A    R +++S  G+VY  A+  D              + +PQLV
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 433

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 434 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  I V  
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 610

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 660

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 661 AAGST-----HCLALTEDSEVHSWGSNDQCQ 686



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V+Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 385 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 433

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 434 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 489

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 490 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 549

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 601

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  V+++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 602 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 636



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VY+ G+ + G  
Sbjct: 2910 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 2968

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2969 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3027

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3028 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3083

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3084 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3141

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3142 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3193

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3194 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3234



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2902 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2958

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            S G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3019 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3077

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3078 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3125

Query: 359  KGQLG 363
             G+LG
Sbjct: 3126 FGKLG 3130



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4073 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4130

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4131 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4186

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4187 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4244

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4245 GKKVNRVACGSAHTLAWS 4262



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3946

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3947 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4005

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 4006 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4065

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RV+ I+  +    +A T  LT+   ++
Sbjct: 4066 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4112

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4113 SWGDGDYGKLG 4123



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 535 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 592

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ V++   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 593 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 651

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 652 LQGKKVIDVAAGSTHCLAL 670



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3086 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3143

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3144 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3202

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 3203 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3251



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +I+   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 593 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 650

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 651 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 708

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 709 IVGIACG 715


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 1775 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRL 1833

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 1834 GLGL-SSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 1892

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG  T +
Sbjct: 1893 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNTTQ 1948

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL  + V VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 1949 LRPKLVK--VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQ 2006

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 2007 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 2058

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+TE+G+++A+G  D GQ G
Sbjct: 2059 MVEGLR--GKKIVHVAVG-----ALHCLAVTETGQVFAWGDNDHGQQG 2099



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 2787 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 2844

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG +Y++    D +LGH        P  ++ +L  + 
Sbjct: 2845 IQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGVE 2903

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +Y+ G G  G+LGHG   D+  P+L+E  Q   +  V 
Sbjct: 2904 VVDIAAGGAHS---ACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVA 2960

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 2961 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3020

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3021 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3069

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3070 L----HCVCCTEDGEVYTWGDNDEGQLG 3093



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 147/302 (48%), Gaps = 28/302 (9%)

Query: 67   QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
            +V+ +G   KD  G    G++G+K +  P   E+L  + VVQ A G+     ++ EG+VY
Sbjct: 1769 KVFVWGLNDKDQLG----GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 1823

Query: 124  TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                  + RLG       +     +  L N  V ++A       A+A    G  V+S G 
Sbjct: 1824 ACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDG-KVFSWGE 1882

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  GKLGH SR +   PRLIE  +   ++   +A G+ H+A +   G + +WG G YG L
Sbjct: 1883 GDDGKLGHFSRMNCDKPRLIEALKTKRIRD--IACGSSHSAAITSSGELYSWGLGEYGRL 1940

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            GHG+   +  PK+V+ L   + + VA G  D  T  ++++G V+S+G G+   LG     
Sbjct: 1941 GHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG--- 1997

Query: 302  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
               G+   N+  PQ +  L    + V QI           + ALT+SG ++ +G GD  +
Sbjct: 1998 ---GSEGCNI--PQNIERLN--GQGVCQIECGAQF-----SLALTKSGVVWTWGKGDYFR 2045

Query: 362  LG 363
            LG
Sbjct: 2046 LG 2047



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 1767 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGK---VY 1823

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 1824 ACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1883

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 1884 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 1943

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P+LV  L  +  RVVQ++  +    +A T ALT+ G ++++G GD
Sbjct: 1944 D--------NTTQLRPKLVKVL--LGHRVVQVACGSR---DAQTLALTDEGMVFSWGDGD 1990

Query: 359  KGQLG 363
             G+LG
Sbjct: 1991 FGKLG 1995



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G+ ++  AAG   +  I+ +G++Y +GK  +G   +G    +L   P+LVE+
Sbjct: 2893 PRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL--KPKLVEA 2950

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 2951 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLG 3009

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 3010 VVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 3064

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 3065 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 3124

Query: 276  FVVS 279
               S
Sbjct: 3125 LAWS 3128



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 2812

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G +
Sbjct: 2813 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G++Y++G G  
Sbjct: 2872 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRY 2931

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 2932 GRLGHGDSEDQ--------LKPKLVEALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 2978

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 2979 SWGDGDYGKLG 2989



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R++Q A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 1951 PKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFG--KLGRGGSEGCNIPQNI 2008

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 2009 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKK 2067

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        V++ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 2068 IVHVAVGALHCLAVT---ETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 2122

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 2123 VACGSSHS 2130


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S +G+VY  A+  D+               +PQLV
Sbjct: 443 PIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDAL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGQRVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P     L ++ V Q A       +LSR GRVYT ++ +DA          + P  L+
Sbjct: 440 VIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDA----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA       VYS GCG GG+LGHG     + P+LI  
Sbjct: 489 QGLVSRNIVKIAAHSDGHHY-LALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKLISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +    + V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+LV  L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLVEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+LVE L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 5/139 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK    G +   TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +
Sbjct: 636 GKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
             + V  P+L+E L+   V+  A G+     L+ +  V+  SWG++ +  H    +  +P
Sbjct: 696 --EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLHATKP 751

Query: 145 HP-LLGTLENIPVVQIAAG 162
            P  L  L+   +V IA G
Sbjct: 752 EPAALPGLDTKHIVGIACG 770


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 23/333 (6%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G+VYA G  + G    G   + LV  P L+ES
Sbjct: 3055 PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLV--PTLLES 3112

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS +  VY++  G+D +LGH        P  L+  L+   
Sbjct: 3113 IQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPK-LIEALQGYE 3171

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+LIE+     +  V 
Sbjct: 3172 IIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVA 3228

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VPK +++L  +  I V  G   +
Sbjct: 3229 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFS 3288

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH     G G    +V  P+ V +L+   ++++ I+ T S
Sbjct: 3289 VALTRSGSVYTWGKGDYHRLGH-----GTGE---HVRRPKKVAALQ--GKKIISIA-TGS 3337

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
            +    H  A ++ G+++ +G  D+GQLG +  N
Sbjct: 3338 L----HCVACSDEGEVFTWGDNDEGQLGDDTTN 3366



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    + G +V   P+    L  +  I  A G+    ++S  G++YA G+ + G  
Sbjct: 2062 LNDKDQLGGMKGSKVK-LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGR- 2119

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ +  L    + + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2120 -LGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 2178

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  ++  L +  +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 2179 RLNLDKPK-MIEALRSKKIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNITQ 2234

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+LI+   L+  + V VA G+  A  +    +G V +WG G +G LG G  E  ++P 
Sbjct: 2235 LKPKLIK--SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPH 2292

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN ++ + +  G   +  +++ G+V+++G G+   LGH +      ++H  V  P 
Sbjct: 2293 NIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGS------DQH--VRKPT 2344

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++ SLK  +++V+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2345 VIESLK--DKKVIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 2385



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    M ++  G+V+++G+   G+  +G +    +  P+++E+L++  +   
Sbjct: 2142 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDI 2199

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+ +L    +VQ+A G    
Sbjct: 2200 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDA 2258

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G  V+S G G  GKLG G       P  IE+   L +  V +  GA  +  +
Sbjct: 2259 QTLALTDEGW-VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLAL 2315

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG+++    P V+++L D K IHVA G      V++ G VY+
Sbjct: 2316 TKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYA 2375

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+        NR      P LV  L+ V+   V    ++SI W
Sbjct: 2376 WGDNDHGQQGNGTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 2419



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 8/285 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    S+Q + I + A  +G    + +S    VY++G+   G+  +G +      +P+L+
Sbjct: 3107 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLI 3164

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E+L+   ++  A G   +A ++  G++YT+  G   RLGH    + ++P  L+  L    
Sbjct: 3165 EALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYK 3223

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ +A G      L C      V+S G G  GKLG G     K P+ IE   L  L  + 
Sbjct: 3224 VIDVACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIK 3280

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G Y  LGHG  E    PK V AL   K I +ATG    
Sbjct: 3281 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHC 3340

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
               S++G+V+++G  +   LG +     Q  R  + L  + +T++
Sbjct: 3341 VACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNV 3385



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 116  LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 164
            L+R    +T SWG    +      H  +   +E      P P    L  +  VQ+  G  
Sbjct: 3016 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3074

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
             L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ + V +G  H  
Sbjct: 3075 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3131

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
             +  D  V +WG G  G LGHGN      PK+++AL   + I +A G   +  ++  G +
Sbjct: 3132 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 3191

Query: 285  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            Y++G G    LGH    D         L P+L+  L  V  +V+ ++  +    +A T  
Sbjct: 3192 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 3238

Query: 345  LTESGKLYAFGAGDKGQLG 363
            +T+   ++++G GD G+LG
Sbjct: 3239 ITDDDNVWSWGDGDYGKLG 3257



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            RV  WG      LG        +P     L+ +  IH+A G  + F+VS +G +Y+ G G
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2115

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
             +  LG      G  N   NV  P+ +  L Q   + V +          H  ALT  GK
Sbjct: 2116 TNGRLGL-----GHSN---NVPYPRPIPFLSQYVIKKVAVHSGGK-----HAMALTLDGK 2162

Query: 351  LYAFGAGDKGQLG 363
            ++++G G+ G+LG
Sbjct: 2163 VFSWGEGEDGKLG 2175



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+  ++I  A GA   + ++D GQVYA+G +  G+   G   T +   P LV  
Sbjct: 2343 PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TIVNRKPALVHG 2400

Query: 98   LKNIFVVQAAIGN 110
            L+++ + + A G+
Sbjct: 2401 LEDVHINRVACGS 2413


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  T+ +     V ++G+   G+  +G    +L+  P  + +L    +   A
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71

Query: 108 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAAGA H+  +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            ++G +  WGWGRYG LG G+     +P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +G LY +G    GQ+G   V +  +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG+RI Q A G    + ++  G+V ++G++  G+   G     LV  PQ +++ + + 
Sbjct: 114 ALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKIQTFQGVP 171

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +   A G   +  ++  G +Y + WG    LG   + ND      + +++   +V +A G
Sbjct: 172 IKMVAAGAEHSVAITENGELYGWGWGRYGNLGL-GDRNDRWIPEKVSSVDCDKMVMVACG 230

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + + ++++   S   +Y+ G    G+LGHG+  D   P   ++ Q L+ + +   +G W 
Sbjct: 231 WRHTISVS---SLGGLYTYGWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWR 284

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+  +   G +  WGW ++G +G G+      P  V+  +D K + ++ G   T  V+E 
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEK 344

Query: 282 GDVYSFGCGESASLGHNAIAD 302
            +V+S+G G +  LGH    D
Sbjct: 345 ENVFSWGRGTNGQLGHGDTVD 365



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 17/281 (6%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ I   AAGA  ++ I++ G++Y +G   +G    G
Sbjct: 146 QNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG 205

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + +  P+ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 206 DRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  L   L +  + Q++ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 264 VPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLLYGWGWNKFGQVGVGDNVDRCSPV- 318

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V +WG G  G LGHG+    + PK+++AL+
Sbjct: 319 --QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
                    G     + S + D+ S   G S S  +  + D
Sbjct: 377 -------VDGSSGPHIESSNTDLLSGKSGASLSERYAVVPD 410


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  T+ +     V ++G+   G+  +G    +L+  P  + +L    +   A
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL--PTHLSALDAQQIDSIA 71

Query: 108 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 130

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G+  D   P+ I+ FQ + ++  +VAAGA H+  +
Sbjct: 131 LAVTMEGE---VQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIK--MVAAGAEHSVAI 185

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            ++G +  WGWGRYG LG G+     +P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 290

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +G LY +G    GQ+G   V +  +R +P +V
Sbjct: 291 STGLLYGWGWNKFGQVG---VGDNVDRCSPVQV 320



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG+RI Q A G    + ++  G+V ++G++  G+   G     LV  PQ +++ + + 
Sbjct: 114 ALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV--PQKIQTFQGVP 171

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +   A G   +  ++  G +Y + WG    LG   + ND      + +++   +V +A G
Sbjct: 172 IKMVAAGAEHSVAITENGELYGWGWGRYGNLGL-GDRNDRWIPEKVSSVDCDKMVMVACG 230

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + + ++++   S   +Y+ G    G+LGHG+  D   P   ++ Q L+ + +   +G W 
Sbjct: 231 WRHTISVS---SLGGLYTYGWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWR 284

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+  +   G +  WGW ++G +G G+      P  V+  +D K + ++ G   T  V+E 
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEK 344

Query: 282 GDVYSFGCGESASLGHNAIAD 302
            +V+S+G G +  LGH    D
Sbjct: 345 ENVFSWGRGTNGQLGHGDTVD 365



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ I   AAGA  ++ I++ G++Y +G   +G    G
Sbjct: 146 QNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG 205

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + +  P+ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 206 DRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  L   L +  + Q++ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 264 VPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLLYGWGWNKFGQVGVGDNVDRCSPV- 318

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V +WG G  G LGHG+    + PK+++AL+
Sbjct: 319 --QVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 23/333 (6%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G+VYA G  + G    G   + LV  P L+ES
Sbjct: 3894 PTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLV--PTLLES 3951

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS +  VY++  G+D +LGH       E   L+  L+   
Sbjct: 3952 IQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPKLIEALQGYE 4010

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+LIE+     +  V 
Sbjct: 4011 IIDIACGGAHSAAIT---STGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVA 4067

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VPK +++L  +  I V  G   +
Sbjct: 4068 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFS 4127

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G G+   LGH     G G    +V  P+ V +L+   ++++ I+ T S
Sbjct: 4128 VALTRSGSVYTWGKGDYHRLGH-----GTGE---HVRRPKKVAALQ--GKKIISIA-TGS 4176

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
            +    H  A ++ G+++ +G  D+GQLG +  N
Sbjct: 4177 L----HCVACSDEGEVFTWGDNDEGQLGDDTTN 4205



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 168/373 (45%), Gaps = 47/373 (12%)

Query: 5   AYQVAHLSPILRPDIINERNGKRNLL--GREVNGT----------PLYCRSLQGIRIIQA 52
           ++ +AHL  +  P I      K N    G+ V G           P  C +L  + I Q 
Sbjct: 417 SFIMAHLDRLAEPHIPPLSFNKSNFYYNGQRVFGWGWFSWIFGVGPQNCDTLSELTIKQI 476

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---G 109
                  ++++  G+V+     S  +             PQ +  L  I +++ A    G
Sbjct: 477 CCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTGLSGINMIKIAAHPEG 524

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
             + A L+++  VY++  G+  RLGH       EP  L+  L+   ++ +  G  Y  A+
Sbjct: 525 KHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGKDIIDVECGGTYSAAI 582

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           +   +  A+Y+ G G  G+LGHG+  D   P +I      ++  V   +   H   +   
Sbjct: 583 S---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQ 639

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G+V +WG G YG LG G  +   +P++++ L +VK + V  G   +  +SEDG VY++G 
Sbjct: 640 GKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGK 699

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           GE   LGH            NV  P++V  L+  + +VV +SL  S     H  ALT+ G
Sbjct: 700 GEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGVS-----HVLALTDQG 744

Query: 350 KLYAFGAGDKGQL 362
           ++Y +G  +  Q+
Sbjct: 745 EVYGWGKNENKQI 757



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    + G +V   P+    L  +  I  A G+    ++S  G++YA G+ + G  
Sbjct: 2901 LNDKDQLGGMKGSKVK-LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGR- 2958

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ +  L    + + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2959 -LGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 3017

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  ++  L +  +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3018 RLNLDKPK-MIEALRSKKIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNITQ 3073

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+LI+   L+  + V VA G+  A  +    +G V +WG G +G LG G  E  ++P 
Sbjct: 3074 LKPKLIK--SLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPH 3131

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN ++ + +  G   +  +++ G+V+++G G+   LGH +      ++H  V  P 
Sbjct: 3132 NIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGS------DQH--VRKPT 3183

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++ SLK  +++V+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3184 VIESLK--DKKVIHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3224



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    M ++  G+V+++G+   G+  +G +    +  P+++E+L++  +   
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLN--LDKPKMIEALRSKKIRDI 3038

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+ +L    +VQ+A G    
Sbjct: 3039 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK-LIKSLVGHRIVQVACGSRDA 3097

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G  V+S G G  GKLG G       P  IE+   L +  V +  GA  +  +
Sbjct: 3098 QTLALTDEGW-VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEV--VQIECGAQFSLAL 3154

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG+++    P V+++L D K IHVA G      V++ G VY+
Sbjct: 3155 TKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYA 3214

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+        NR      P LV  L+ V+   V    ++SI W
Sbjct: 3215 WGDNDHGQQGNGTTI---VNRK-----PALVHGLEDVHINRVACGSSHSIAW 3258



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 8/285 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    S+Q + I + A  +G    + +S    VY++G+   G+  +G +      +P+L+
Sbjct: 3946 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA--CETPKLI 4003

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E+L+   ++  A G   +A ++  G++YT+  G   RLGH    + ++P  L+  L    
Sbjct: 4004 EALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPK-LIEELVGYK 4062

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ +A G      L C      V+S G G  GKLG G     K P+ IE   L  L  + 
Sbjct: 4063 VIDVACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIES--LAGLGVIK 4119

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G Y  LGHG  E    PK V AL   K I +ATG    
Sbjct: 4120 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHC 4179

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
               S++G+V+++G  +   LG +     Q  R  + L  + +T++
Sbjct: 4180 VACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNV 4224



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 39/278 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           PQ  ++L  + + Q    +    +L++ G+V+   + +D +           P  + G L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQC----------PQEMTG-L 510

Query: 152 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             I +++IAA   G  YL AL        VYS G G GG+LGHG  + ++ P LI+  + 
Sbjct: 511 SGINMIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            ++  + V  G  ++A +  +G + TWG G YG LGHG  E    P ++ AL+D   I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 269 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           A G +   T  ++  G VYS+G G+   LG    +DG          P+L+  L+ V  +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674

Query: 327 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
           +VQ+      Y  A  + AL+E G +Y +G G+  +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 116  LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 164
            L+R    +T SWG    +      H  +   +E      P P    L  +  VQ+  G  
Sbjct: 3855 LNRRPEDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTP-CEALSTLRPVQLVGGEQ 3913

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
             L A+    +   VY+ G G GG+LG G       P L+E  Q + ++ + V +G  H  
Sbjct: 3914 TLFAVT---ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCL 3970

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
             +  D  V +WG G  G LGHGN      PK+++AL   + I +A G   +  ++  G +
Sbjct: 3971 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQL 4030

Query: 285  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            Y++G G    LGH    D         L P+L+  L  V  +V+ ++  +    +A T  
Sbjct: 4031 YTWGKGRYGRLGHGDSEDQ--------LKPKLIEEL--VGYKVIDVACGSG---DAQTLC 4077

Query: 345  LTESGKLYAFGAGDKGQLG 363
            +T+   ++++G GD G+LG
Sbjct: 4078 ITDDDNVWSWGDGDYGKLG 4096



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 13/133 (9%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            RV  WG      LG        +P     L+ +  IH+A G  + F+VS +G +Y+ G G
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2954

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
             +  LG      G  N   NV  P+ +  L Q   + V +          H  ALT  GK
Sbjct: 2955 TNGRLGL-----GHSN---NVPYPRPIPFLSQYVIKKVAVHSGGK-----HAMALTLDGK 3001

Query: 351  LYAFGAGDKGQLG 363
            ++++G G+ G+LG
Sbjct: 3002 VFSWGEGEDGKLG 3014



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+  ++I  A GA   + ++D GQVYA+G +  G+   G   T +   P LV  
Sbjct: 3182 PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TIVNRKPALVHG 3239

Query: 98   LKNIFVVQAAIGN 110
            L+++ + + A G+
Sbjct: 3240 LEDVHINRVACGS 3252


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 482 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 530

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 531 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 586

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 587 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 646

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+++G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 647 KVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 698

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 699 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 733



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 530

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 531 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 590

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 591 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 647

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V  +G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 648 VIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 707

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 708 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 757

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 758 AAGST-----HCLALTEDSEVHSWGSNDQCQ 783



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ ++D GQV+++G   +G  + G  G+    
Sbjct: 632 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYG--KLGRGGSDGCK 689

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 690 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 748

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 749 LQGKKVIDVAAGSTHCLAL 767



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 5/139 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK    G +   TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +
Sbjct: 678 GKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 737

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
             + V  P+L+E L+   V+  A G+     L+ +  V+  SWG++ +  H       +P
Sbjct: 738 --EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKP 793

Query: 145 HP-LLGTLENIPVVQIAAG 162
            P  L  L+   +V IA G
Sbjct: 794 EPAALPGLDTKHIVGIACG 812


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 150/282 (53%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L ++ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 700 VIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 748

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 749 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVIST 804

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 805 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 864

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 865 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 916

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 917 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 951



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 4235 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4292

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 4293 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4351

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V  +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 4352 VADVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4408

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4409 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4468

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4469 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4517

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4518 L----HCVCCTEDGEVYTWGDNDEGQLG 4541



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 703  PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 748

Query: 96   ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
            + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 749  QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGK 808

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                 VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 809  QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 865

Query: 211  LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 866  VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 925

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++V+ +
Sbjct: 926  GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 975

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
            +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 976  AAGST-----HCLALTEDSEVHSWGSNDQCQ 1001



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 3227 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3285

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ V +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3286 GLGL-SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3344

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 3345 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3400

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3401 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3458

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 3459 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3510

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3511 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3551



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 3219 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3275

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR +       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3276 ACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3336 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3394

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3395 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3442

Query: 359  KGQLG 363
             G+LG
Sbjct: 3443 FGKLG 3447



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI +   AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4386

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4387 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4444

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4445 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4500

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4501 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4558

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4559 GKKVNRVACGSAHTLAWS 4576



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4260

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4261 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4319

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++   VA G   +  V+  GD+Y++G G  
Sbjct: 4320 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRY 4379

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 4380 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4426

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4427 SWGDGDYGKLG 4437



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 850 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 907

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 908 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 966

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 967 LQGKKVIDVAAGSTHCLAL 985



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 8/168 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3403 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3460

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 3461 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3519

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L+
Sbjct: 3520 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLV 3564



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 908  TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 965

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
             L+   V+  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 966  GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDTKH 1023

Query: 156  VVQIAAG 162
            +V IA G
Sbjct: 1024 IVGIACG 1030


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G++YA G+ + G  
Sbjct: 2928 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRL 2986

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2987 GLGL-SSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3045

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG  T +
Sbjct: 3046 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNTTQ 3101

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3102 LRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3159

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3160 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3211

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3212 IVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3252



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 163/342 (47%), Gaps = 39/342 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 96
           P++C++L    + Q        +++S +G VY              Q  K  T +P L+ 
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVY-------------TQNYKSTTLAPMLIH 439

Query: 97  SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 150
            L +  +V+ A    G  F A LS  G VY++  G+  RLGH       EP  +    G 
Sbjct: 440 GLSSRKIVKLAAHPDGQHFLA-LSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGK 498

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VVQIA G  Y  A+    +   +Y+ G G  G+LGHGS  D   P L+   +   
Sbjct: 499 QTGKQVVQIACGSTYSAAVT---ADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQK 555

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 556 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 615

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+ SL+   ++VV I
Sbjct: 616 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GKKVVDI 665

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           ++ ++     H  ALT+ G+++++G+ DK Q    L  N+ +
Sbjct: 666 AVGST-----HCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQ 702



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3919 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3976

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  + 
Sbjct: 3977 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGVE 4035

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L++  Q   +  V 
Sbjct: 4036 VVDIAAGGAHS---ACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVA 4092

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 4093 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4152

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4153 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4201

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4202 L----HCVCCTEDGEVYTWGDNDEGQLG 4225



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 34/290 (11%)

Query: 81  YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           +G+ G KL   V  P   ++L +  V Q         +LSR G VYT ++ +        
Sbjct: 379 WGLLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYKS-------- 430

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
               + P  L+  L +  +V++AA       LA   SG  VYS GCG GG+LGHG  T  
Sbjct: 431 --TTLAPM-LIHGLSSRKIVKLAAHPDGQHFLALSTSG-EVYSWGCGDGGRLGHGDATYL 486

Query: 198 KHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           + P LI  F  +    Q V +A G+ ++A V  DG + TWG G YG LGHG+ E  + P 
Sbjct: 487 EEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPM 546

Query: 256 VVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +V AL   K + VA  +GD  T  V+E+G V+S+G G+   LG    +DG         T
Sbjct: 547 LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKT 598

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           P+LV  L+ ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 599 PKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 641



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     +Y
Sbjct: 2920 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---IY 2976

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S    + PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2977 ACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3036

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 3037 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH- 3095

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P+LV  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3096 -------GDNTTQLRPKLVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3143

Query: 359  KGQLG 363
             G+LG
Sbjct: 3144 FGKLG 3148



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G+ ++  AAG   +  I+ +G+++ +GK  +G   +G 
Sbjct: 4011 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD 4070

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LV++L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4071 SEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4128

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4129 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4184

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4185 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4242

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4243 GKKINRVACGSAHTLAWS 4260



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 85/135 (62%), Gaps = 5/135 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           TP+   +L+G +++  A G+G  +T+ +++ GQV+++G   +G  + G  G+    +P+L
Sbjct: 544 TPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCKTPKL 601

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           VE L+++ +V+   G+ F+  L+++G+VYT+  G++ RLGH T+ +   P  LL +L+  
Sbjct: 602 VEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGK 660

Query: 155 PVVQIAAGYCYLLAL 169
            VV IA G  + LAL
Sbjct: 661 KVVDIAVGSTHCLAL 675



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3944

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3945 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4003

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4004 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4063

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4064 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4110

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4111 SWGDGDYGKLG 4121



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3104 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3161

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3162 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKK 3220

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3221 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3275

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3276 VACGSSHS 3283



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLV 95
           TP     LQ + I++   G+  ++ ++  GQVY +GK   G+ +    GT + V  P+L+
Sbjct: 598 TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK---GDNQRLGHGTDEHVRYPKLL 654

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLEN 153
           +SL+   VV  A+G+     L+ EG V+  SWG++ +L H     PN  +P  L G L +
Sbjct: 655 DSLQGKKVVDIAVGSTHCLALTDEGEVH--SWGSNDKLQHFDTLFPNKKQPKALPG-LNS 711

Query: 154 IPVVQIAAG 162
             +V I+ G
Sbjct: 712 KHIVGISCG 720


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 165/360 (45%), Gaps = 47/360 (13%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---V 89
           E   TP    SL G  +   A GA  ++ ++ AG+VYAFG D  GE +     T+L   V
Sbjct: 194 EAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG-DCSGEGKALSAPTRLREAV 252

Query: 90  TSPQLVESLKNIF--VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN----- 140
             P  V +  N    V   A G    A ++  G +   SWGN+   +LG     +     
Sbjct: 253 IDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVL--LSWGNEEFGQLGQGPPRDSSSKG 310

Query: 141 ----------DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
                     D    P L    ++    +A G  + LAL        V+S G G  G LG
Sbjct: 311 DAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGR---VFSFGRGAFGALG 367

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           HG R +   PRL++   L  +    +AAG  H+A +   GRV TWG G+YG LGH + + 
Sbjct: 368 HGDRLNCDVPRLVD--ALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDN 425

Query: 251 ESVPKVVQALND--VKAIHVATGDYTTFVVSEDGD--VYSFGCGESASLGHNAIADGQGN 306
            S P  VQAL+D  V+   +A G   T  ++  G   + ++G G S   G  A AD    
Sbjct: 426 RSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATAD---- 481

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
               VLTP ++      +E+V QIS  +      H+ A+TE G +Y +GA  +GQLG EL
Sbjct: 482 ----VLTPTIIDRALLGDEKVFQISAGSK-----HSVAVTEGGCVYTWGARTQGQLGHEL 532



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 113/257 (43%), Gaps = 41/257 (15%)

Query: 137 TEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG--CGLGGKLGHGS 193
           +E  +  P P  + +L+   V  +A G  + +A+    S   VY+ G   G G  L   +
Sbjct: 190 SEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVT---SAGEVYAFGDCSGEGKALSAPT 246

Query: 194 RTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----- 246
           R  E      E     N  P V  VA G  H A V   G + +WG   +G LG G     
Sbjct: 247 RLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDS 306

Query: 247 ------------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
                         +   +P++V +   VK   VA G   T  ++ +G V+SFG G   +
Sbjct: 307 SSKGDAKSLIRRRADASMMPRLVGS-GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGA 365

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH       G+R  N   P+LV +L  V   V QI+  ++     H+ +L+ SG++Y +
Sbjct: 366 LGH-------GDR-LNCDVPRLVDALWGVG--VAQIAAGDN-----HSASLSASGRVYTW 410

Query: 355 GAGDKGQLGIELVNNQT 371
           G G  G LG   V+N++
Sbjct: 411 GRGKYGALGHRDVDNRS 427


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
           domestica]
          Length = 4706

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + I Q A    R +++S  G+VY  A+  D+ G              PQLV
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLG--------------PQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G V+++  G+  RLGH       EP     L G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+  L+   ++VV +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVVDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3026 GLGI-SSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3084

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +Y+ G G  G+LGHG  T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3141 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3250

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVG-----ALHCLAVTDTGQVYAWGDNDHGQQG 3291



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ + Q A       +LSR GRVY  ++ +D  LG            L+
Sbjct: 440 VIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDT-LGPQ----------LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   V+S GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVFSWGCGDGGRLGHGDTVPLEEPKMISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              +      V +A G+ ++A +  +G + TWG G YG LGHG+ E +++P +V  L  +
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I V+  +GD  T  V+E+G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3075

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH- 3134

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182

Query: 359  KGQLG 363
             G+LG
Sbjct: 3183 FGKLG 3187



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 20/239 (8%)

Query: 1    MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAG--R 58
            + TP   +A L PI    +I    G++ L     +G      +LQG R+I  A G+G  +
Sbjct: 3978 VPTPCEALAALRPI---QLIG---GEQTLFAVTADGK---VEALQGYRVIDIACGSGDAQ 4028

Query: 59   TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
            T+ ++D   V+++G   +G+   G  G+     P  ++SL  + VV+   G+ F+  L++
Sbjct: 4029 TLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4086

Query: 119  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
             G VYT+  G+  RLGH ++ +   P  + G L+   V+ IA G   L  + C   G  V
Sbjct: 4087 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATG--SLHCVCCTEDG-EV 4142

Query: 179  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG---AWHAAVVGQDGRVCT 234
            Y+ G    G+LG G+    + PRL+   Q   +  V   +    AW  +     G++ T
Sbjct: 4143 YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPT 4201



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 41/287 (14%)

Query: 65   AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            +G +Y +G +  G+   G++G K V  P   E+L  +  +Q   G      ++ +G+V  
Sbjct: 3954 SGTIYGWGHNHRGQLG-GIEGAK-VKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEA 4011

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
                                      L+   V+ IA G      L C      V+S G G
Sbjct: 4012 --------------------------LQGYRVIDIACGSGDAQTL-CLTDDDTVWSWGDG 4044

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG G Y  LG
Sbjct: 4045 DYGKLGRGGSDGCKVPMKIDS--LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4102

Query: 245  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
            HG+++    P+ VQ L   K I +ATG       +EDG+VY++G  +   LG     DG 
Sbjct: 4103 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-----DGT 4157

Query: 305  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             N    +  P+LV +L+      V     +++ W+    A   +GKL
Sbjct: 4158 TN---AIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPA--NAGKL 4199



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG+   G  G++    PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNI 3200

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKK 3259

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3260 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3314

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3315 VACGSSHS 3322



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 203  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            +E  Q   +  +   +G      +  D  V +WG G YG LG G  +   VP  + +L  
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 263  VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            +  + V  G   +  +++ G VY++G G+   LGH +          +V  P+ V  L+ 
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ- 4119

Query: 323  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              ++V+ I+ T S+    H    TE G++Y +G  D+GQLG
Sbjct: 4120 -GKKVIAIA-TGSL----HCVCCTEDGEVYTWGDNDEGQLG 4154



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
            L+   VV  A G+     L+ +  V+  SWG++ +  H       +P P  L  L+   
Sbjct: 706 GLQGKKVVDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRITKPEPTALPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 17/122 (13%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ L     + +A  +  +    ++  G+V+S+GCG+   LGH      +       
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE------- 537

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
             P+++++L  KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG     +
Sbjct: 538 -EPKMISALSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLGHGSSED 591

Query: 370 QT 371
           QT
Sbjct: 592 QT 593


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 27/330 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ A G      ++  G++YA G  +      G+ GT  VT+P LVES
Sbjct: 4401 PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA--GGRLGIGGTDSVTTPTLVES 4458

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+++ + + A+  G      LS +G V+++  G D +LGH    +   P  L+  L  I 
Sbjct: 4459 LQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK-LIEALSGIG 4517

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+ IA G  +    AC  S   V + G G  G+LGHG   D+  P+L+E   LL  + + 
Sbjct: 4518 VIDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVE--ALLGYRAID 4572

Query: 216  VAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            +A G+  A    +  D  V +WG G YG LG G  +   VP  +++L  +    V  G  
Sbjct: 4573 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQ 4632

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  ++  G VY++G G+   LGH       GN   +V  P+ V +L+   ++++ I+ T
Sbjct: 4633 FSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HVRRPKKVAALQ--GKKIISIA-T 4681

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 4682 GSL----HCVACSDGGEVFTWGDNDEGQLG 4707



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 3248 LNDKEQLGGLKGSKVK-LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGR- 3305

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V +P+ V  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3306 -LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 3364

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+ TL    +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3365 RLTLEKPK-LIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQ 3420

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVV--GQDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L + + V VA G+  A  +   ++G V +WG G +G LG G  E  S+P 
Sbjct: 3421 LKPKLVTA--LADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPH 3478

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             V+ LN V  + +  G   +  +++ G+V+++G G+   LGH        ++H    TP 
Sbjct: 3479 QVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT------DQHVRKPTP- 3531

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+   ++V+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3532 -IQGLR--GKKVIHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3571



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 149/312 (47%), Gaps = 23/312 (7%)

Query: 37   TPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            TP    SLQ + I + A  +G    + +S  G+V+++G+   G+  +G + +     P+L
Sbjct: 4452 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKL 4509

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +E+L  I V+  A G+  +A ++ +G V T+  G   RLGH    + ++P  L+  L   
Sbjct: 4510 IEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGY 4568

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              + IA G      L C      V+S G G  GKLG G     K P  IE   L  L   
Sbjct: 4569 RAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIES--LAGLGVT 4625

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             V  G+  +  + + G V TWG G Y  LGHGN +    PK V AL   K I +ATG   
Sbjct: 4626 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLH 4685

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
                S+ G+V+++G  +   LG   ++  Q         P+LV SL+   + +V++    
Sbjct: 4686 CVACSDGGEVFTWGDNDEGQLGDGTVSAIQ--------RPRLVQSLQ--GKHIVKV---- 4731

Query: 335  SIYWNAHTFALT 346
             I  +AHT AL+
Sbjct: 4732 -ICGSAHTLALS 4742



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 14/293 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    M ++  G+V+++G+   G+  +G + T  +  P+L+E+L+   +   
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLT--LEKPKLIETLRTKRIRDI 3385

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH      ++P  L+  L +  VVQ+A G    
Sbjct: 3386 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK-LVTALADHRVVQVACGSRDA 3444

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              L     G+ V+S G G  GKLG G       P  +E+   + +  + +  GA  +  +
Sbjct: 3445 QTLCLTEEGL-VFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGV--MQIECGAQFSLAL 3501

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P  +Q L   K IHVA G      V++ G VY+
Sbjct: 3502 TKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYA 3561

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            +G  +           G GN   N   P LV  L  +    V    ++S+ W+
Sbjct: 3562 WGDNDHGQ-------QGSGNTIVNK-KPSLVLGLDGIFVNRVACGSSHSVAWS 3606



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 18/208 (8%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +E    + V Q A       +L+  G+V +    N      HT P+   P P+ G LE++
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN-----CHT-PDTTAPKPIEG-LESV 628

Query: 155 PVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +VQ+AA +C   ++LAL        V+S G G GG+LGHG  + +  P  I    L   
Sbjct: 629 NIVQLAA-HCEGRHVLALTATGD---VFSWGNGEGGRLGHGDTSSKDIPTRI--VALAER 682

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA-- 269
           Q   V  G+ ++A +   G + TWG G YG LGHGN E + +P +VQ L   + IHVA  
Sbjct: 683 QVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALG 742

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGH 297
            GD  +  V++ G VY++G G+   LG+
Sbjct: 743 CGDAHSLCVTDTGIVYAWGDGDFGKLGN 770



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 117/241 (48%), Gaps = 19/241 (7%)

Query: 125  FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            F WG++ R  LG         P P    L  +  +QIA G   L A+   P G  +Y+ G
Sbjct: 4380 FGWGHNHRGQLGGLDGSRIKMPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4435

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G GG+LG G       P L+E  Q + ++ V V +G  H   +  DG V +WG G  G 
Sbjct: 4436 YGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4495

Query: 243  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            LGHGN +    PK+++AL+ +  I +A G   +  ++  G V ++G G    LGH    D
Sbjct: 4496 LGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4555

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                     L P+LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+L
Sbjct: 4556 Q--------LQPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKL 4602

Query: 363  G 363
            G
Sbjct: 4603 G 4603



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 30/320 (9%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G+++ Q A       +++  GQV +         ++    T   T+P+ +E L+++ +VQ
Sbjct: 581 GVQVRQVACSETSIYILTTTGQVLSL--------QHSNCHTPDTTAPKPIEGLESVNIVQ 632

Query: 106 AAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            A       VL+       FSWGN    RLGH    +   P  ++   E     Q+   +
Sbjct: 633 LAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAER----QVTGVF 688

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           C     A   +   +Y+ G G  G+LGHG+  D+  P +++  +   +  V +  G  H+
Sbjct: 689 CGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHS 748

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDG 282
             V   G V  WG G +G LG+G     SVP  ++       A+ V +G + +  +  DG
Sbjct: 749 LCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDG 808

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            VYS+G G    LGH            +  +P+ + +L+  N   + + L       AH 
Sbjct: 809 TVYSWGKGHGGRLGHGH--------SEHTASPKAIQALEGKNIVDLAVGL-------AHC 853

Query: 343 FALTESGKLYAFGAGDKGQL 362
            ALT SG+LY +G  D  QL
Sbjct: 854 LALTASGELYGWGRNDFQQL 873



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 12/283 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGA-GRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P     L+ + I+Q AA   GR +L ++  G V+++G    G   +G   +K +  P  +
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI--PTRI 676

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            +L    V     G+ ++A ++  G +YT+  G   RLGH    +   P  ++  L+   
Sbjct: 677 VALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLP-TIVQVLKQQR 735

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ +A G     +L    +G+ VY+ G G  GKLG+G+      P  IE  Q  +   V 
Sbjct: 736 VIHVALGCGDAHSLCVTDTGI-VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSD-GAVK 793

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V +G+  +  +G+DG V +WG G  G LGHG+ E  + PK +QAL     + +A G    
Sbjct: 794 VFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHC 853

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
             ++  G++Y +G  +   L    +      R   VL P L T
Sbjct: 854 LALTASGELYGWGRNDFQQLCPPCV-----TRDPIVLLPILTT 891



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        +P     L+ +K IH+A G  + F+VS+DG +Y+  CG
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA--CG 3299

Query: 291  ESAS----LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            E  +    LGHN           NV TP+ V  L Q   + V +          H  ALT
Sbjct: 3300 EGTNGRLGLGHN----------NNVPTPKQVPILSQYVVKKVAVH-----SGGKHAMALT 3344

Query: 347  ESGKLYAFGAGDKGQLG 363
              GK++++G G+ G+LG
Sbjct: 3345 LDGKVFSWGEGEDGKLG 3361



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P   + L+G ++I  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV  
Sbjct: 3529 PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLG 3586

Query: 98   LKNIFVVQAAIGNFFTAVLS 117
            L  IFV + A G+  +   S
Sbjct: 3587 LDGIFVNRVACGSSHSVAWS 3606


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 74  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIK--MVAAGAEHTAAV 187

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT
Sbjct: 248 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 292

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T     +
Sbjct: 168 AFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 226

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++   SG A+Y+ G    G+LGHG   D   P  +E      +  +  
Sbjct: 227 SMVACGWRHTISVSY--SG-ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI-- 281

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 282 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI I   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 208 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 266 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 320

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 321 --QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 158/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 62

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 63  CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 121

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V
Sbjct: 122 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 176

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS         HT ALT
Sbjct: 237 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGFR-----HTMALT 281

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 282 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 311



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 99  TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 156

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T     +
Sbjct: 157 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 215

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++      A+Y+ G    G+LGHG   D   P  +E   L N     +
Sbjct: 216 SMVACGWRHTISVSYSG---ALYTYGWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQI 270

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           + G  H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T 
Sbjct: 271 SGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V+E  +V+++G G +  LG
Sbjct: 331 AVTERNNVFAWGRGTNGQLG 350



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 137 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 196

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 197 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 254

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 255 IPHKLE-ALSNSFISQISGGFRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSP-- 308

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 309 -VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 27/332 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTC 74

Query: 109 GNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + L
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCL 133

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+  +     V S G    G+LG G   D   P+ I+ F+ + ++  +VAAGA H A V 
Sbjct: 134 AVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAVT 188

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y++
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH  + D         L P  + +L   N  + QIS      W  HT ALT 
Sbjct: 249 GWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALTS 293

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 294 DGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  +     +
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVT-SAGGEKM 226

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++   SG A+Y+ G    G+LGHG   D   P  +E      +  +  
Sbjct: 227 SMVACGWRHTISVSY--SG-ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI-- 281

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T
Sbjct: 282 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340

Query: 276 FVVSEDGDVYSFGCGESASLG 296
             V+E  +V+++G G +  LG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S     +   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 208 DRNDRLV--PERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G+ + +AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 266 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 320

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 321 --QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 42/347 (12%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SP 92
           VNG P+ C++L  + + Q        +++S +G VY+             Q  K  T +P
Sbjct: 430 VNG-PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS-------------QNYKSTTLAP 475

Query: 93  QLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            L+  L +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  ++G
Sbjct: 476 MLIHVLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDTTYLEEPK-MIG 533

Query: 150 TLENIP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           T         VV +A G  Y  A+    +   +Y+ G G  G+LGHGS  D+  P ++  
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAIT---ADGELYTWGRGNYGRLGHGSSEDQTTPMVVTA 590

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           F+ L +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  
Sbjct: 591 FKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI 650

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           + V  G   +  +++DG VY++G G++  LGH            +V  P+L+ SL+   +
Sbjct: 651 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRYPKLLDSLQ--GK 700

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +VV +++ ++     H  ALT+ G++ ++G+ DK Q    L +N+ +
Sbjct: 701 KVVDVAVGST-----HCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQ 742



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G++YA G+ + G  
Sbjct: 2963 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRL 3021

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  +  P+ + +L N  + + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3022 GLGL-SSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3080

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG  T +
Sbjct: 3081 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNTTQ 3136

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  +VP+
Sbjct: 3137 LRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQ 3194

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3195 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3246

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3247 MVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3287



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3975 PTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4032

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  + 
Sbjct: 4033 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGVE 4091

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L++  Q   +  V 
Sbjct: 4092 VVDIAAGGAHS---ACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVA 4148

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   +P  + +L  +  + V  G   +
Sbjct: 4149 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFS 4208

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4209 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4257

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4258 L----HCVCCTEDGEVYTWGDNDEGQLG 4281



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     +Y
Sbjct: 2955 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---IY 3011

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3012 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEG 3071

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 3072 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH- 3130

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P+LV  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3131 -------GDNTTQLRPKLVKVL--LGHRVIQVACGSR---DAQTLALTDEGFVFSWGDGD 3178

Query: 359  KGQLG 363
             G+LG
Sbjct: 3179 FGKLG 3183



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G+ ++  AAG   +  I+ +G+++ +GK  +G   +G 
Sbjct: 4067 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD 4126

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LV++L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 4127 SEDQL--KPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGC 4184

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 4185 KIPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4240

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 4241 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4298

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 4299 GKKINRVACGSAHTLAWS 4316



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG   E   V+       L  +  VQ+  G   L A+   
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVT-- 4000

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 4001 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4060 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4119

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4120 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4166

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4167 SWGDGDYGKLG 4177



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 3139 PKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFG--KLGRGGSEGCNVPQNI 3196

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ +  +P  + G L    
Sbjct: 3197 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKK 3255

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 3256 IVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3310

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3311 VACGSSHS 3318



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLV 95
           TP     LQ + I++   G+  ++ ++  GQVY +GK   G+ +    GT + V  P+L+
Sbjct: 638 TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK---GDNQRLGHGTDEHVRYPKLL 694

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLEN 153
           +SL+   VV  A+G+     L+ +G V   SWG++ +L H      N  +P  L G L +
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTDDGEV--LSWGSNDKLQHFDTLFSNKKQPKALPG-LNS 751

Query: 154 IPVVQIAAG 162
             +V I+ G
Sbjct: 752 KHIVGISCG 760


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 157/318 (49%), Gaps = 25/318 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V ++G+   G+  +G    +L   P  + +L    ++   
Sbjct: 15  RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF--PTKLSALDGQDIICVT 72

Query: 108 IGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S  GR VY++ WG+  RLGH    + + PHP+   L+ + + QIA G  + 
Sbjct: 73  CGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIK-ALQGLMIQQIACGDSHC 131

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        V S G    G+LG G+  D   P+ I+ F+ + ++  +VAAGA H+  +
Sbjct: 132 LAVTMDSQ---VLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIK--MVAAGAEHSVAI 186

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     +P+ V    D  A+ VA G   T  VS  G +Y+
Sbjct: 187 TKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM-VACGWRHTICVSSSGGLYT 245

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            G G+   LGH    D         L P+ V +L   ++ + Q+S      W  H+ ALT
Sbjct: 246 NGWGKYGQLGHGDFEDH--------LVPRKVQALS--DKFISQVSGG----WR-HSMALT 290

Query: 347 ESGKLYAFGAGDKGQLGI 364
            SG+L  +G    GQ+G+
Sbjct: 291 SSGQLLGWGWNKFGQIGV 308



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 148/327 (45%), Gaps = 25/327 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +L G  II    GA  TM  S++G+ VY++G   FG   +G     L+  P  ++
Sbjct: 57  PTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLI--PHPIK 114

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ + + Q A G+     ++ + +V ++    +  LG  T  + + P  +    E IP+
Sbjct: 115 ALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQ-IFEEIPI 173

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +AAG  + +A+    +   +Y  G G  G LG G R D   P   E+  +   +  +V
Sbjct: 174 KMVAAGAEHSVAITKDGN---LYGWGWGRYGNLGLGDRNDRLLP---EKVTVDGDKMAMV 227

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G  H   V   G + T GWG+YG LGHG+ E   VP+ VQAL+D     V+ G   + 
Sbjct: 228 ACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSM 287

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G +  +G  +   +G     D                S  QVN    Q     S 
Sbjct: 288 ALTSSGQLLGWGWNKFGQIGVGNNFD--------------CCSPMQVNFPHDQKVQMISC 333

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
            W  HT A+TE   +Y++G G  GQLG
Sbjct: 334 GWR-HTIAVTERENVYSWGRGANGQLG 359



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+ I Q A G    + ++   QV ++G++  GE   G     L+  PQ ++ 
Sbjct: 110 PHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLL--PQKIQI 167

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + I +   A G   +  ++++G +Y + WG    LG     + + P  +  T++   + 
Sbjct: 168 FEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV--TVDGDKMA 225

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ + +   C  S   +Y+ G G  G+LGHG   D   PR   + Q L+ + +   
Sbjct: 226 MVACGWRHTI---CVSSSGGLYTNGWGKYGQLGHGDFEDHLVPR---KVQALSDKFISQV 279

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           +G W H+  +   G++  WGW ++G +G GN      P  V   +D K   ++ G   T 
Sbjct: 280 SGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTI 339

Query: 277 VVSEDGDVYSFGCGESASLGHNAIAD 302
            V+E  +VYS+G G +  LG+    D
Sbjct: 340 AVTERENVYSWGRGANGQLGNGETID 365



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 24/228 (10%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ ++AG  + +AL    SG  V S G G  G+LGHG   D   P  +      ++  + 
Sbjct: 16  VLLVSAGASHSVALL---SGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDI--IC 70

Query: 216 VAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           V  GA H     + GR V +WGWG +G LGHG+     +P  ++AL  +    +A GD  
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSH 130

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
              V+ D  V S+G  ++  LG     D         L PQ +   +++  ++V      
Sbjct: 131 CLAVTMDSQVLSWGRNQNGELGLGTAEDS--------LLPQKIQIFEEIPIKMVAAGA-- 180

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
                 H+ A+T+ G LY +G G  G LG+    ++ +R  PE+V +D
Sbjct: 181 -----EHSVAITKDGNLYGWGWGRYGNLGL---GDRNDRLLPEKVTVD 220


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 170/336 (50%), Gaps = 29/336 (8%)

Query: 32   REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
            R  N TP  C +L  +R IQ A G      ++  G++YA G  +      GV GT  VT+
Sbjct: 4109 RIKNPTP--CEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA--GGRLGVGGTDSVTT 4164

Query: 92   PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            P LVESL+++ + + A+  G      LS +G V+++  G D +LGH    +   P  L+ 
Sbjct: 4165 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK-LIE 4223

Query: 150  TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            +L  I VV IA G  +   +  Q     V + G G  G+LGHG   D+  P+L+E   LL
Sbjct: 4224 SLSGIGVVDIACGSAHSACITIQGH---VLTWGKGRYGRLGHGDSEDQLQPKLVE--ALL 4278

Query: 210  NLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
              + + +A G+  A    +  D  V +WG G YG LG G  +   VP  +++L  +    
Sbjct: 4279 GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTK 4338

Query: 268  VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
            V  G   +  ++  G VY++G G+   LGH       GN   +V  P+ V +L+   +++
Sbjct: 4339 VECGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HVRRPKKVAALQ--GKKI 4388

Query: 328  VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + I+ T S+    H  A +++G+++ +G  D+GQLG
Sbjct: 4389 ISIA-TGSL----HCVACSDAGEVFTWGDNDEGQLG 4419



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 3035 LNDKEQLGGLKGSKVK-LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGR- 3092

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V +P+ V  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3093 -LGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 3151

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+ TL    +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3152 RLTLEKPK-LIETLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQ 3207

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+   Q  + + V VA G+  A    + +DG V +WG G +G LG G  E  S+P 
Sbjct: 3208 LKPKLVTALQ--DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPH 3265

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             V  LN V  + +  G   +  +++ G+V+++G G+   LGH        ++H    TP 
Sbjct: 3266 QVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGT------DQHVRKPTP- 3318

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+   ++V+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3319 -IQGLR--GKKVIHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 3358



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 149/312 (47%), Gaps = 23/312 (7%)

Query: 37   TPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            TP    SLQ + I + A  +G    + +S  G+V+++G+   G+  +G + +     P+L
Sbjct: 4164 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDS--YDRPKL 4221

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +ESL  I VV  A G+  +A ++ +G V T+  G   RLGH    + ++P  L+  L   
Sbjct: 4222 IESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPK-LVEALLGY 4280

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              + IA G      L C      V+S G G  GKLG G     K P  IE   L  L   
Sbjct: 4281 RAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIES--LAGLGVT 4337

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             V  G+  +  + + G V TWG G Y  LGHGN +    PK V AL   K I +ATG   
Sbjct: 4338 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLH 4397

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
                S+ G+V+++G  +   LG   ++  Q         P+LV SL+   + +V++    
Sbjct: 4398 CVACSDAGEVFTWGDNDEGQLGDGTVSAIQ--------RPRLVQSLQ--GKHIVKV---- 4443

Query: 335  SIYWNAHTFALT 346
             I  +AHT AL+
Sbjct: 4444 -ICGSAHTLALS 4454



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 28/214 (13%)

Query: 156 VVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +VQ+AA +C   ++LALA   S   VYS G G GG+LGHG  + ++ P  I    L + Q
Sbjct: 609 IVQLAA-HCEGRHVLALA---SSGDVYSWGSGDGGRLGHGDTSAKELPTRIA--ALADRQ 662

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--T 270
              V  G+ ++A +   G + TWG G YG LGHGN E + VP +V AL   + +HVA   
Sbjct: 663 VTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           GD  +  V+E G  +++G G+   LG+ +                 V +   V   + Q 
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNESC----------------VGTSVPVQVDLPQA 766

Query: 331 SLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
           S    ++  +  + ALT  G +Y +G G  G+LG
Sbjct: 767 SCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLG 800



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 7/252 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P   + L+   +  AA   GR +L ++ +G VY++G    G   +G    K +  P  + 
Sbjct: 599 PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL--PTRIA 656

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L +  V     G+ ++A ++  G +YT+  G   RLGH    +   P  L+  L+   V
Sbjct: 657 ALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVP-TLVTALKAHRV 715

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V +A G     +L    +G+A ++ G G  GKLG+ S      P  ++  Q   +  V V
Sbjct: 716 VHVALGCGDAHSLCVTEAGLA-FAWGDGDFGKLGNESCVGTSVPVQVDLPQASCV--VKV 772

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            +G+  +  + ++G V TWG G  G LGHGN E   VPK+VQAL   K + +A G     
Sbjct: 773 FSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCL 832

Query: 277 VVSEDGDVYSFG 288
            ++  G++Y +G
Sbjct: 833 ALTASGELYGWG 844



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 23/255 (9%)

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           L+  G VY++  G+  RLGH     D     L   +  +   Q+   +C     A   + 
Sbjct: 624 LASSGDVYSWGSGDGGRLGH----GDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             +Y+ G G  G+LGHG+  D+  P L+   +   +  V +  G  H+  V + G    W
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739

Query: 236 GWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           G G +G L  GNE C   SVP  V        + V +G   +  ++ +G VY++G G   
Sbjct: 740 GDGDFGKL--GNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGG 797

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH        + H+ V  P++V +L+   +++V +++       AH  ALT SG+LY 
Sbjct: 798 RLGHG------NSEHSPV--PKMVQALE--GKKIVDLAVG-----LAHCLALTASGELYG 842

Query: 354 FGAGDKGQLGIELVN 368
           +G  D  Q+  E V 
Sbjct: 843 WGRNDFQQICPECVT 857



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 19/241 (7%)

Query: 125  FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            F WG++ R  LG         P P    L  +  +QIA G   L A+   P G  +Y+ G
Sbjct: 4092 FGWGHNHRGQLGGLDGSRIKNPTPC-EALSLLRPIQIAGGEQTLYAVT--PDG-KLYATG 4147

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G GG+LG G       P L+E  Q + ++ V V +G  H   +  DG V +WG G  G 
Sbjct: 4148 YGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4207

Query: 243  LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            LGHGN +    PK++++L+ +  + +A G   +  ++  G V ++G G    LGH    D
Sbjct: 4208 LGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSED 4267

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                     L P+LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+L
Sbjct: 4268 Q--------LQPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKL 4314

Query: 363  G 363
            G
Sbjct: 4315 G 4315



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L+  RI   A G+  +  I+ +G++Y +G   +G   +G   T+L   P+LV +
Sbjct: 3158 PKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTA 3215

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L++  VVQ A G  +  T  L+ +G V+++  G+  +LG         PH +   L  + 
Sbjct: 3216 LQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQV-DRLNGVG 3274

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V+QI  G  + LAL        V++ G G   +LGHG+   ++H R     Q L  + V+
Sbjct: 3275 VMQIECGAQFSLALT---KAGEVWTWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVI 3328

Query: 216  -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             VA GA H   V   G+V  WG   +G  G GN      P +V  L+ +    VA G
Sbjct: 3329 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 19/191 (9%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S T++ +P  ++  +   +Q      G  H   +   G V +WG G  G LGHG+   + 
Sbjct: 592 SMTEDNYPAQVKGLECTIVQLAAHCEGR-HVLALASSGDVYSWGSGDGGRLGHGDTSAKE 650

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +P  + AL D +   V  G   +  ++  G++Y++G G    LGH       GN   +  
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGH-------GNSE-DKY 702

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P LVT+LK    RVV ++L      +AH+  +TE+G  +A+G GD G+LG     N++ 
Sbjct: 703 VPTLVTALKA--HRVVHVALGCG---DAHSLCVTEAGLAFAWGDGDFGKLG-----NESC 752

Query: 373 RGNPERVDIDL 383
            G    V +DL
Sbjct: 753 VGTSVPVQVDL 763



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        +P     L+ +K IH+A G  + F+VS+DG +Y+  CG
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYA--CG 3086

Query: 291  ESAS----LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            E  +    LGHN           NV TP+ V  L Q   + V +          H  ALT
Sbjct: 3087 EGTNGRLGLGHN----------NNVPTPKQVPILSQYVVKKVAVHSGGK-----HAMALT 3131

Query: 347  ESGKLYAFGAGDKGQLG 363
              GK++++G G+ G+LG
Sbjct: 3132 LDGKVFSWGEGEDGKLG 3148



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P   + L+G ++I  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV  
Sbjct: 3316 PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQ--GSGNTIVNKKPSLVLG 3373

Query: 98   LKNIFVVQAAIGNFFTAVLS 117
            L  IFV + A G+  +   S
Sbjct: 3374 LDGIFVNRVACGSSHSVAWS 3393


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 32/362 (8%)

Query: 24  NGKRNLLGREVNG---TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
            G    LG   NG    P    SL G  I     G+  T  +S  G ++ +G   +G+  
Sbjct: 33  RGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLG 92

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEP 139
           +G +     ++P+ V+SL  + VV  A G+  TA+++  G +YT+    +   GH  TE 
Sbjct: 93  HGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEG 150

Query: 140 NDVEPHPLLGTLENIPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
           +   P  LL  L    VVQ++A G+       C      VY+ G G  G+LGHG+  +  
Sbjct: 151 HQYTP-KLLERLSGKRVVQLSACGF----HTGCLTDAGEVYTWGEGKFGRLGHGAERNCH 205

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL+E   LL  +PV ++ G +H+AVV  DG++ T+G G +G LGHG++  +  P +V+
Sbjct: 206 SPRLVET--LLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK 263

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L+ V    +  G   +  ++   +VY++G G+   LGH     G G +   V TPQLV 
Sbjct: 264 DLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH-----GCGKK---VSTPQLVE 315

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA---FGAGDKGQLGIELVNNQTERGN 375
            L  V ++VV ++      +N HT  L E   + A      G   Q+G   +++  E  N
Sbjct: 316 KL--VGQKVVCVA-----SYNEHTACLVEPHSVNASRRHAPGTMVQIGAGYLHDMKELVN 368

Query: 376 PE 377
            E
Sbjct: 369 DE 370



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 24/302 (7%)

Query: 63  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
           +  G VY +G+   G   +G  G K V  P+L  SL    +     G++ TA +S +G +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYV--PRLTHSLAGQVITHVTCGSYHTAAVSSKGNL 80

Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           +T+  G   +LGH  E     P   + +L  + VV IA G  +    A   S   +Y+ G
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSRHT---AIVTSRGCLYTWG 136

Query: 183 CGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
               G  GHG     ++ P+L+E+  L   + V ++A  +H   +   G V TWG G++G
Sbjct: 137 DKENGVAGHGDTEGHQYTPKLLER--LSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFG 194

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGHG E     P++V+ L   + + ++ G + + VV+ DG +Y+FG GE   LGH    
Sbjct: 195 RLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH---- 250

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
              G++  N + P LV  L  V   + QI+      W +H+ ALT S ++Y +G GD G+
Sbjct: 251 ---GDK-VNKVKPTLVKDLDGVF--LTQITCG----W-SHSVALTSSHEVYTWGNGDHGK 299

Query: 362 LG 363
           LG
Sbjct: 300 LG 301


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 39/346 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 96
           P++C+SL  + + Q        +++S +G VY              Q  K  T +P L+ 
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVY-------------TQNYKSTTLAPMLIH 474

Query: 97  SLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GT 150
           SL +  +V+ A    G  + A LS  G V+++  G+  RLGH       EP  +    G 
Sbjct: 475 SLSSRKIVKLAAHPDGQHYLA-LSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGK 533

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y   +        +Y+ G G  G+LGHGS  D+  P L+   + L 
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGE---LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLK 590

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+V +WG G YG LG G  +    PK+V+ L D+  + V  
Sbjct: 591 VVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VY++G G++  LGH            +V  P+L+ +L+   ++VV +
Sbjct: 651 GSQFSVALTKDGQVYTWGKGDNQRLGHGT--------DEHVRFPKLLDTLQ--GKKVVDV 700

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           ++ ++     H  ALT+ G+++++G+ DK Q    L N +  +  P
Sbjct: 701 AVGST-----HCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKALP 741



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 175/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G++YA G+ + G  
Sbjct: 2952 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRL 3010

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  +  P+ + +L N  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 3011 GLGL-SSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFS 3069

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  A+    S   +YS G G  G+LGHG    +
Sbjct: 3070 RMNCDKPR-LIEALKTKRIRDIACGSSHSAAIT---SSGELYSWGLGEYGRLGHGDNATQ 3125

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 3126 LRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3183

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH            +V  PQ
Sbjct: 3184 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT--------DVHVRKPQ 3235

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3236 MVEGLR--GKKIVHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 3276



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3964 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4021

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  + 
Sbjct: 4022 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGVE 4080

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  +   +++ G G  G+LGHG   D+  P+L++  Q   +  V 
Sbjct: 4081 VVDIAAGGAHS---ACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVA 4137

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   +P  + +L  +    V  G   +
Sbjct: 4138 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFS 4197

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 4198 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4246

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 4247 L----HCVCCTEDGEVYTWGDNDEGQLG 4270



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 40/293 (13%)

Query: 81  YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           +G+ G KL   V+ P   +SL ++ V Q         +LS  G VYT ++ +        
Sbjct: 414 WGLLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKS-------- 465

Query: 138 EPNDVEPHPLLGTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
               + P  L+ +L +  +V++AA   G  Y LAL+   S   V+S GCG GG+LGHG  
Sbjct: 466 --TTLAPM-LIHSLSSRKIVKLAAHPDGQHY-LALS---SNGEVFSWGCGDGGRLGHGDA 518

Query: 195 TDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           T  + P +I  F  +      V +A G+ ++AV+  DG + TWG G YG LGHG+ E ++
Sbjct: 519 TYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQT 578

Query: 253 VPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
            P +V AL  +K + VA  +GD  T  V+E+G V+S+G G+   LG    +DG       
Sbjct: 579 TPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG------- 630

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             TP+LV  L+ ++  +V++   +       + ALT+ G++Y +G GD  +LG
Sbjct: 631 CKTPKLVEKLQDLD--IVKVCCGSQF-----SVALTKDGQVYTWGKGDNQRLG 676



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     +Y
Sbjct: 2944 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---IY 3000

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 3001 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++YS+G GE   LGH 
Sbjct: 3061 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH- 3119

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +A  L P+LV  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 3120 -------GDNATQLRPKLVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3167

Query: 359  KGQLG 363
             G+LG
Sbjct: 3168 FGKLG 3172



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+G+ ++  AAG   +  I+ +G+++ +GK  +G   +G    +L   P+LV++
Sbjct: 4070 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL--KPKLVDA 4127

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   V+  A G  +  T  L+ +  V+++  G+  +LG         P  +  +L  + 
Sbjct: 4128 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKI-DSLTGLG 4186

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V ++  G  + +AL    SG AVY+ G G   +LGHGS    + PR ++  Q    + + 
Sbjct: 4187 VTKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIA 4241

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G+ H     +DG V TWG    G LG G       P++V AL   K   VA G   T
Sbjct: 4242 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4301

Query: 276  FVVS 279
               S
Sbjct: 4302 LAWS 4305



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 87/139 (62%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E   TP+   +L+G++++  A G+G  +T+ +++ GQV+++G   +G  + G  G+    
Sbjct: 575 EDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 632

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+LVE L+++ +V+   G+ F+  L+++G+VYT+  G++ RLGH T+ +   P  LL T
Sbjct: 633 TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPK-LLDT 691

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   VV +A G  + LAL
Sbjct: 692 LQGKKVVDVAVGSTHCLAL 710



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-TEALATLRPVQLIGGEQTLFAVT-- 3989

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3990 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  V+ + +A G   +  ++  G+++++G G  
Sbjct: 4049 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4108

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH    D         L P+LV +L+    RV+ ++  +    +A T  LT+   ++
Sbjct: 4109 GRLGHGDSEDQ--------LKPKLVDALQ--GHRVIDVACGSG---DAQTLCLTDDDMVW 4155

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 4156 SWGDGDYGKLG 4166



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)

Query: 25   GKRNLLGREVNGT---PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEA 79
            G+   LG   N T   P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG-- 3169

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
            + G  G++    PQ +E L    V Q   G  F+  L++ G V+T+  G+  RLGH T+ 
Sbjct: 3170 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229

Query: 140  NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
            +  +P  + G L    +V +A G  + LA+        VY+ G    G+ G+G+ T  + 
Sbjct: 3230 HVRKPQMVEG-LRGKKIVHVAVGALHCLAVT---DTGQVYAWGDNDHGQQGNGTTTVNRK 3285

Query: 200  PRLIEQFQLLNLQPVVVAAGAWHA 223
            P L++  +   +    VA G+ H+
Sbjct: 3286 PTLVQGLEGQKI--TRVACGSSHS 3307



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 24/153 (15%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLV 95
           TP     LQ + I++   G+  ++ ++  GQVY +GK   G+ +    GT + V  P+L+
Sbjct: 633 TPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGK---GDNQRLGHGTDEHVRFPKLL 689

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++L+   VV  A+G+     L+ +G V+  SWG++ +L H              TL N  
Sbjct: 690 DTLQGKKVVDVAVGSTHCLALTDDGEVH--SWGSNDKLQH------------FDTLSNKK 735

Query: 156 VVQIAAGYCYLLALACQP------SGMAVYSVG 182
             +   G  +++ ++C P      S  + +SVG
Sbjct: 736 QPKALPGLKHIVGISCGPGQSFAWSSCSEWSVG 768


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 23/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 2284 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 2341

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH +      P  ++ +L  I 
Sbjct: 2342 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPR-VIESLRGIE 2400

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L+E  Q   +  + 
Sbjct: 2401 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIA 2457

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 2458 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFS 2517

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++ + I+ T S
Sbjct: 2518 VALTKAGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKAIAIA-TGS 2566

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 2567 L----HCVCCTEDGEVYTWGDNDEGQLG 2590



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 168/330 (50%), Gaps = 26/330 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P +  +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL-SSGTVPLPRQVTA 1346

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L +  V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKR 1405

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + V 
Sbjct: 1406 IRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKV--LLGHRVVQ 1460

Query: 216  VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            VA G+  A  +    +G V +WG G +G LG G  E  ++P+ ++ LN      +  G  
Sbjct: 1461 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 1520

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++ 
Sbjct: 1521 FSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVG 1570

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   H  A+T+SG++YA+G  D GQ G
Sbjct: 1571 A-----LHCLAVTDSGQVYAWGDNDHGQQG 1595



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 10/258 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2435

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 2436 SEDQL--KPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 2493

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL       AVY+ G G   +LGHGS    + PR
Sbjct: 2494 KVPMKI-DSLTGLGVVRVECGSQFSVALT---KAGAVYTWGKGDYHRLGHGSDDHVRRPR 2549

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG V TWG    G LG G       P++V AL 
Sbjct: 2550 QVQGLQ--GKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 2607

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 2608 GKKVNRVACGSAHTLAWS 2625



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 2309

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 2310 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2368

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHG+      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 2369 YSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 2428

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV I+  +    +A T  LT+   ++
Sbjct: 2429 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVGIACGSG---DAQTLCLTDDDTVW 2475

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 2476 SWGDGDYGKLG 2486



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R++Q A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 1447 PKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 1504

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 1505 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 1563

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+    SG  VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 1564 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 1612



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 253  VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            VP   + L+ +  + VA G  + F V+ +G VY+ G   +  L       G G     V 
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL-------GLGLSSGTVP 1339

Query: 313  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             P+ VT+L     + V +          H  ALT  GK++++G GD G+LG
Sbjct: 1340 LPRQVTALSSYVVKKVAVHSGGR-----HATALTVDGKVFSWGEGDDGKLG 1385


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  +AGA  ++ +     V ++G+   G+  +G    +   SP  + +L    +V   
Sbjct: 7   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 64

Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S+ G  VY++ WG+  RLGH    +   P P+   L  I + QIA G  + 
Sbjct: 65  CGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 123

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G   D   P+ I+ F+ + ++   VAAGA H A V
Sbjct: 124 LAVTXEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--XVAAGAEHTAAV 178

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG +  WGWGRYG LG G+     VP+ V +    K   VA G   T  VS  G +Y+
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH  + D         L P  + +L   N  + QIS         HT ALT
Sbjct: 239 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGGAR-----HTXALT 283

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             GKLY +G    GQ+G   V N  ++ +P +V
Sbjct: 284 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 313



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TPL  ++L GIRI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 101 TPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 158

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + I +   A G   TA ++ +G +Y + WG    LG     + + P  +  T      
Sbjct: 159 AFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKX 217

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + ++++      A+Y+ G    G+LGHG   D   P  +E   L N     +
Sbjct: 218 SXVACGWRHTISVSYSG---ALYTYGWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQI 272

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           + GA H   +  DG++  WGW ++G +G GN   +  P  V+  +D K + V+ G   T 
Sbjct: 273 SGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 332

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V+E  +V+++G G +  LG
Sbjct: 333 AVTERNNVFAWGRGTNGQLG 352



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GIRI   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 139 QNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 198

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S         A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 199 DRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 256

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L N  + QI+ G  +  AL    S   +Y  G    G++G G+  D+  P  
Sbjct: 257 IPHKLE-ALSNSFISQISGGARHTXALT---SDGKLYGWGWNKFGQVGVGNNLDQCSP-- 310

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V  WG G  G LG G     + PK+++AL+
Sbjct: 311 -VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 369


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 152/307 (49%), Gaps = 31/307 (10%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V+ FG++S+GE   G+   +  + P  V     + V Q A GN   AVL+R G V T  +
Sbjct: 41  VFVFGQNSYGE--LGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLALACQPSGMAVYSVGCGLG 186
               +LGH    +   P  +  +L+NI +  I+ A  C  LA+  Q   +  Y+ G    
Sbjct: 99  NGSGQLGHGNNKSISTPKKI-ESLKNIRITHISSANGCENLAIISQDGKL--YTCGYNNY 155

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR--------VCTWGWG 238
           G+LGHG++++   P L++   L + Q   V+   +H+ +V QD R        V + G  
Sbjct: 156 GQLGHGTQSNLSTPTLVQA--LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LG  +   E  PK++++LN  + I  A G + +  V+  G+V+S G  ++  LGHN
Sbjct: 214 DNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHN 273

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                          P L+ SLK  N+ +VQ +     Y+  HT    ++G++YAFG  D
Sbjct: 274 DTKSRN--------QPVLIESLK--NKFIVQAACG---YY--HTLVRRDTGEIYAFGRND 318

Query: 359 KGQLGIE 365
           KGQLGIE
Sbjct: 319 KGQLGIE 325



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 163/384 (42%), Gaps = 71/384 (18%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R    + + Q AAG     +++  G V   G +  G+  +G    K +++P+ +ES
Sbjct: 63  PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHG--NNKSISTPKKIES 120

Query: 98  LKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           LKNI +  + +A G    A++S++G++YT  + N  +LGH T+ N   P  L+  L++  
Sbjct: 121 LKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQ 179

Query: 156 VVQIAAGYCYLLALA-----CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           V  ++  Y + L +             VYSVG    G+LG      E  P++I     LN
Sbjct: 180 VTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRS---LN 236

Query: 211 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            + V+  A G  H+  V   G V + G+   G LGH + +  + P ++++L +   +  A
Sbjct: 237 TRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAA 296

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLG-----------------------------HNAI 300
            G Y T V  + G++Y+FG  +   LG                              N +
Sbjct: 297 CGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQL 356

Query: 301 ADGQGNRHA---------------------NVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             GQ +                        N   PQ+    K+VN   +     +SI   
Sbjct: 357 HSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSI--- 413

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
               AL ESG+L+ FG G+ GQLG
Sbjct: 414 ----ALCESGQLFTFGRGNHGQLG 433



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 8/251 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   RSL   ++IQ A G   ++ ++  G+V++ G +  G+   G   TK    P L+E
Sbjct: 228 TPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ--LGHNDTKSRNQPVLIE 285

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SLKN F+VQAA G + T V    G +Y F   +  +LG  T    +     +     +  
Sbjct: 286 SLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSN 345

Query: 157 VQIAAGYCYLLALA---CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +Q + G    L       QPS  ++   G  + G L   +  + + P++    + +N+  
Sbjct: 346 IQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQG-LAESNNLNNQQPQVQYLSKKVNISK 404

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           +  A G +H+  + + G++ T+G G +G LG GN E + +PK V +L+D K I +A G Y
Sbjct: 405 I--ACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFY 462

Query: 274 TTFVVSEDGDV 284
            T V+ +   V
Sbjct: 463 HTIVLVKQKKV 473



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 30/298 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQ-------VYAFGKDSFGEAEYGVQGTKL 88
           TP   ++L+  ++   +     +++++ D  Q       VY+ G++  G+   G + T  
Sbjct: 168 TPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ--LGQEHTCH 225

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
             +P+++ SL    V+Q A G   +  ++  G V++  + ++ +LGH+   +  +P  L+
Sbjct: 226 EITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQP-VLI 284

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQ 207
            +L+N  +VQ A GY + L    +     +Y+ G    G+LG  +       P+ I++F 
Sbjct: 285 ESLKNKFIVQAACGYYHTLV---RRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF- 340

Query: 208 LLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESV----PKVVQALND 262
            L +  +  + G  +    GQ+  +  +   G  G +  G  E  ++    P+V      
Sbjct: 341 -LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKK 399

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
           V    +A G Y +  + E G +++FG G    L       GQGN     L P+ V SL
Sbjct: 400 VNISKIACGCYHSIALCESGQLFTFGRGNHGQL-------GQGNTEDQKL-PKQVASL 449


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 30/321 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AGA  ++ +     + ++G+   G+  +G    +LV  P ++           ++
Sbjct: 24  VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLV--PTVLSGFDAAAPGITSV 81

Query: 109 ---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
               +  TA    E +VY++ WG+  RLGH    +   P P+   L+ I + QIA G  +
Sbjct: 82  ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVK-ALQGIKIKQIACGDSH 140

Query: 166 LLALACQPSGMA--VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            LA+      MA  V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H 
Sbjct: 141 CLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK--MIAAGAEHT 193

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           A V +DG +  WGWGRYG LG G+     VP+ V ++   K + +A G   T  VS  G 
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           +Y++G  +   LGH    D         L P  + +LK  +  + QIS      W  HT 
Sbjct: 254 LYTYGWSKYGQLGHGDFEDH--------LVPHKLEALK--DSSISQISGG----WR-HTM 298

Query: 344 ALTESGKLYAFGAGDKGQLGI 364
           ALT  GKLY +G    GQ+G+
Sbjct: 299 ALTSDGKLYGWGWNKFGQVGV 319



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 10/280 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQGI+I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 119 TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 176

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           S + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++E   +
Sbjct: 177 SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV-SSVEGEKM 235

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E  +  ++  +  
Sbjct: 236 VLIACGWRHTITVS---SSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQI-- 290

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+ +    P  V+   D K   VA G   T
Sbjct: 291 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHT 349

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
              +E  +V+S+G G S  LGH  I D       + L+P 
Sbjct: 350 LAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPD 389



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   +S +G+ +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 157 QNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 216

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 217 DRNDRLV--PEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 274

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L++  + QI+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 275 VPHKLE-ALKDSSISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGDTDDHCFPV- 329

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +    Q V   A  W H     +   V +WG G  G LGHG     + P ++ AL+
Sbjct: 330 --QVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 35/299 (11%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           + +L+   VV  + G   + VL+ EGRV++F  G   RLGH  E    EP  +       
Sbjct: 31  IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTA 90

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI----------- 203
            V +I+AG  + LAL     G A YS G G+ G+LGHG  TD+  PR I           
Sbjct: 91  GVAKISAGTTHSLALT--KDGKA-YSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPV 147

Query: 204 -EQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            ++ +     PV+  VAAG +H+ ++  DGRV ++G G  G LGHG+ +    P +++AL
Sbjct: 148 GDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEAL 207

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            D + + +A G   T V+ ++G V+ FG   S         +GQ      VL P  +   
Sbjct: 208 ADRRIVSMACGSANTLVLDDEGRVFFFGLDYSE---FPKFTEGQAR---FVLLPSALGLA 261

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           +++ E               H   LT  GKL AFG G  G+LG+    ++T R  P  V
Sbjct: 262 EEITEVRA---------GEGHCLLLTREGKLLAFGLGKNGRLGL---GDETNRLAPTAV 308



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 45/348 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  R+L+  R++  +AG   ++++++ G+V++FG    G   +G + T     P+ + 
Sbjct: 29  TPI--RALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCF--EPRRIA 84

Query: 97  SLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---------- 145
                  V + + G   +  L+++G+ Y+F +G   RLGH  E + + P           
Sbjct: 85  FFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGAS 144

Query: 146 PLLGTL----ENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           P +G      E  PV++ +AAGY + L L        VYS G G+ G LGHG R     P
Sbjct: 145 PPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR---VYSFGAGVMGALGHGDRDKRLRP 201

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG--WGRYGCLGHGNEECESVPKVVQ 258
            +IE   L + + V +A G+ +  V+  +GRV  +G  +  +     G      +P  + 
Sbjct: 202 TMIE--ALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALG 259

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
              ++  +    G     +++ +G + +FG G++  LG   + D       N L P  VT
Sbjct: 260 LAEEITEVRAGEGH--CLLLTREGKLLAFGLGKNGRLG---LGD-----ETNRLAPTAVT 309

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALT----ESGKLYAFGAGDKGQL 362
                    V+I +        H  AL     E  +LYAFG+GD+GQL
Sbjct: 310 -FPSNGTTSVEIDIA---CGAKHGLALVDVPGEGPRLYAFGSGDQGQL 353



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 21/208 (10%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R+    P    +L   RI+  A G+  T+++ D G+V+ FG D     ++     + V  
Sbjct: 195 RDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLL 254

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPL 147
           P  +   + I  V+A  G+    +L+REG++  F  G + RLG   E N + P     P 
Sbjct: 255 PSALGLAEEITEVRAGEGHCL--LLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPS 312

Query: 148 LGTLENIPVVQIAAGYCYLLALACQP-SGMAVYSVGCGLGGKLGHGSRTDEKHPR----- 201
            GT      + IA G  + LAL   P  G  +Y+ G G  G+L +G R D   P      
Sbjct: 313 NGTTS--VEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASPTATTTS 370

Query: 202 ---LIEQFQLLNLQPVVVAAGAWHAAVV 226
              L+ Q    ++ P  ++AG  H+ V+
Sbjct: 371 LPALLHQ----HIVPAAISAGKAHSLVL 394


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 27/348 (7%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 4   LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 62

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
             G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+ +  G+D +LGH +
Sbjct: 63  GLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFS 121

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 122 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 177

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
             P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 178 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 235

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 236 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 287

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +V  L+   +++V +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 288 VVEGLR--GKKIVHVAVG-----ALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 57/178 (32%)

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--------------- 297
           VP   + L+ +  + VA G  + F V+ +G VY+ G   +  LG                
Sbjct: 20  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 79

Query: 298 ------NAIADGQGNRHANVLT--------------------------PQLVTSLKQVNE 325
                   +A   G RHA  LT                          P+L+ +LK   +
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALK--TK 137

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           R+  I+  +S     H+ ALT SG+LY +G G+ G+LG     + T +  P+ V + L
Sbjct: 138 RIRDIACGSS-----HSAALTSSGELYTWGLGEYGRLGH---GDNTTQLKPKMVKVLL 187


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 29/340 (8%)

Query: 43  SLQGIR--IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           S +G+R  ++  +AGA  ++ +     V ++G+   G+  +G    +    P +V +L +
Sbjct: 8   SSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF--PTIVSALDD 65

Query: 101 IFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
             +     G   T  LS   + VY++ WG+  RLGH    +   P P+   L+ + V QI
Sbjct: 66  CEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK-ALKGLEVKQI 124

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  + LA+        V   G    G+LG G   D   P  +  F+ + ++  ++AAG
Sbjct: 125 ACGDSHCLAITTDGE---VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK--MLAAG 179

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
           A H   V ++G++  WGWGRYG LG G+ E   VP  V A+       VA G   T  V+
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVA 239

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           E G++Y+FG  +   LGH   AD         L P  V +LK    + +         W 
Sbjct: 240 ESGNMYTFGWSKYGQLGHGDFAD--------HLIPHQVQALKSKKIQAITGG------WR 285

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            HTFAL   G+LY +G    GQ+G     N  ++ +P+ V
Sbjct: 286 -HTFALDSDGRLYGWGWNKFGQVG---CGNTEDQSSPQLV 321



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 158/348 (45%), Gaps = 33/348 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +L    I     GA  T  +S++ + VY++G   FG   +G      +  PQ ++
Sbjct: 57  PTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFI--PQPIK 114

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIP 155
           +LK + V Q A G+     ++ +G V  +    + +LG  HTE + + PH L    E + 
Sbjct: 115 ALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTE-DVLTPHKLT-AFEGVA 172

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQP 213
           V  +AAG  +  A+        +Y  G G  G LG G R D   P  +     +L+ +  
Sbjct: 173 VKMLAAGAEHTTAVT---ENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKM-- 227

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VA G  H   V + G + T+GW +YG LGHG+     +P  VQAL   K   +  G  
Sbjct: 228 --VACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWR 285

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            TF +  DG +Y +G  +   +G     D          +PQLV  L+     VVQ    
Sbjct: 286 HTFALDSDGRLYGWGWNKFGQVGCGNTEDQS--------SPQLVKGLQDQVVTVVQCG-- 335

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
               W  HT A+T+ G +Y++G G  GQLG     +  +R  P+R++I
Sbjct: 336 ----WR-HTLAMTDRGNVYSWGRGTSGQLGH---GDTVDRSTPKRIEI 375



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 10/277 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+G+ + Q A G    + I+  G+V  +G++  G+   G+  T+ V +P  + +
Sbjct: 110 PQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQ--LGLGHTEDVLTPHKLTA 167

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + + V   A G   T  ++  G++Y + WG    LG     + + P  +      + + 
Sbjct: 168 FEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-MK 226

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ + +   C      +Y+ G    G+LGHG   D   P    Q Q L  + +   
Sbjct: 227 MVACGWRHTI---CVAESGNMYTFGWSKYGQLGHGDFADHLIP---HQVQALKSKKIQAI 280

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            G W H   +  DGR+  WGW ++G +G GN E +S P++V+ L D     V  G   T 
Sbjct: 281 TGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTL 340

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
            +++ G+VYS+G G S  LGH    D    +   +L+
Sbjct: 341 AMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILS 377



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E   TP    + +G+ +   AAGA  T  +++ G++Y +G   +G    G
Sbjct: 147 QNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P  V ++    +   A G   T  ++  G +YTF W    +LGH    + +
Sbjct: 207 DREDRLV--PDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L++  +  I  G+ +  AL    S   +Y  G    G++G G+  D+  P+L
Sbjct: 265 IPHQVQ-ALKSKKIQAITGGWRHTFAL---DSDGRLYGWGWNKFGQVGCGNTEDQSSPQL 320

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           ++  Q    Q V V    W H   +   G V +WG G  G LGHG+    S PK ++ L+
Sbjct: 321 VKGLQ---DQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILS 377


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 2191 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2249

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 2250 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 2308

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 2309 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 2364

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 2365 LKPKMVK--VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2422

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ LN      +  G   +  +++ G V+++G G+   LGH +          +V  PQ
Sbjct: 2423 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 2474

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +V  L+   +++V +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2475 VVEGLR--GKKIVHVAVG-----ALHCLAVTDAGQVYAWGDNDHGQQG 2515



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 24/328 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      G+ GT+ V++P L+ES
Sbjct: 3203 PTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 3260

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L  I 
Sbjct: 3261 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 3319

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV +AAG  +    AC  +   +Y+ G G  G+LGH    D+  P+L++  Q   +  V 
Sbjct: 3320 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVA 3376

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  + +L  +  + V  G   +
Sbjct: 3377 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3436

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++ G VY++G G+   LGH +          +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3437 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 3485

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G  Y +G  D+GQLG
Sbjct: 3486 L----HCVCCTEDGS-YTWGDNDEGQLG 3508



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121  RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 2183 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 2239

Query: 180  SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 2240 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 2300 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 2358

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                     +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 2359 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 2406

Query: 359  KGQLG 363
             G+LG
Sbjct: 2407 FGKLG 2411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 11/258 (4%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+GI ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3354

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               +L   P+LV++L+   VV  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3355 SEDQL--KPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3412

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +  +L  + VV++  G  + +AL    SG AVY+ G G   +LGHGS    + PR
Sbjct: 3413 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 3468

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             ++  Q    + + +A G+ H     +DG   TWG    G LG G       P++V AL 
Sbjct: 3469 QVQGLQ--GKKVIAIATGSLHCVCCTEDGSY-TWGDNDEGQLGDGTTNAIQRPRLVAALQ 3525

Query: 262  DVKAIHVATGDYTTFVVS 279
              K   VA G   T   S
Sbjct: 3526 GKKVNRVACGSAHTLAWS 3543



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3172 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALAALRPVQLIGGEQTLFAVT-- 3228

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3229 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+V+++L  ++ + VA G   +  V+  GD+Y++G G  
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3347

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 3348 GRLGHSDSEDQ--------LKPKLVDALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 3394

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3395 SWGDGDYGKLG 3405



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2367 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 2424

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2425 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2483

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +
Sbjct: 2484 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2532


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 35/349 (10%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L+  ++    AG+  ++ I D G+++ +G +  G   +  + TK    P  V++L N+
Sbjct: 33  KALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTENIPSQVKALANV 91

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-------ENI 154
            +VQAAIG +    +  +GR Y +      + G   E  D    PL   +         +
Sbjct: 92  NIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL 151

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V+S     G     G       P  ++  + + L   
Sbjct: 152 VVRQVAAGGTHSVVLTREGH---VWS----WGQPWPPGDIKQISVPVRVQGLERVRL--- 201

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+ +  + +A G + 
Sbjct: 202 -IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWH 260

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  +++DG+VY +G GE   LG         N  ++ + PQ V  L  V E +VQ+S   
Sbjct: 261 STALTDDGEVYGWGRGEHGRLGFGD------NDKSSKMVPQRVNLL--VGEDIVQVSCGG 312

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           +     H+ ALT  G++Y FG GD G+LG      +   G P  V ID+
Sbjct: 313 T-----HSVALTRDGRMYTFGRGDHGRLGY---GRKVTTGQPMEVPIDI 353



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 26/271 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 89
           P   ++L  + I+QAA G    + + D G+ YA+G + +G+         + G    + +
Sbjct: 82  PSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 141

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             PQ   S   + V Q A G   + VL+REG V+++        G    P D++   +  
Sbjct: 142 VIPQRCAS--KLVVRQVAAGGTHSVVLTREGHVWSW--------GQPWPPGDIKQISVPV 191

Query: 150 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            ++ +  V+ IA G  + LAL  Q  G  +++ G    G+LG G       P  ++    
Sbjct: 192 RVQGLERVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPITVQGLSG 248

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 266
           L L  V +AAG WH+  +  DG V  WG G +G LG G+ +  S  VP+ V  L     +
Sbjct: 249 LTL--VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV 306

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            V+ G   +  ++ DG +Y+FG G+   LG+
Sbjct: 307 QVSCGGTHSVALTRDGRMYTFGRGDHGRLGY 337



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 15/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG GN E +    +V+AL   K   V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH         +  N+  P  V +L  VN  +VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPE-----TKTENI--PSQVKALANVN--IVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E    + + G P R DI
Sbjct: 113 YAWGGNEYGQCG-EEPERKDDTGRPLRRDI 141


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 26/333 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  + G+  ++ + D G V ++G+   G+  +G       TSP  + +L +  V    
Sbjct: 11  RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDAVV 68

Query: 108 IGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G  +T AV S  G++Y++ WG+  RLGH    +   P P+       PV ++A G  + 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHT 127

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L +  Q  G A+Y+ G    G+LG G   D   P+L+   Q   +  V  A G+ H+   
Sbjct: 128 LVVT-QGDG-ALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSV--ACGSEHSLAA 183

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            + G V +WGWGRYG LG G+ +    P  V  L+ V    V  G   + VV+++G V++
Sbjct: 184 TEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFT 243

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   LGH          H +   P LV  L+      V         W  HT A  
Sbjct: 244 FGWSKYGQLGH--------GDHVDHTRPCLVAGLQHCRVSTVAGG------WR-HTMAAD 288

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             G LYA+G    GQLG+    +  +R  P  V
Sbjct: 289 SEGNLYAWGWNKFGQLGL---GDSEDRAAPTPV 318



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 23/273 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
             G  + + A G   T++++   G +Y FG++  G+   G+  T    SPQLV +L+   
Sbjct: 112 FSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQ--LGLGHTNDCLSPQLVTALQGER 169

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V   A G+  +   +  G V+++ WG    LG     +   P  ++G L+ + V  +  G
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCG 228

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + +   +  +     V++ G    G+LGHG   D   P L+   Q   +  V   AG W 
Sbjct: 229 WRHSAVVTDEGR---VFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV---AGGWR 282

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV------------KAIHVA 269
           H      +G +  WGW ++G LG G+ E  + P  V                  +   +A
Sbjct: 283 HTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLA 342

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            G   T  V+E G+VYS+G G +  LGH A  D
Sbjct: 343 CGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 30/293 (10%)

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF----FTAVLSREGRVYTFSWGNDARL 133
           +   G+  T  V SP  + +L+ + VV  A G       +A ++ +G+VYT+  G   +L
Sbjct: 8   DGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQL 67

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           GH    N V P  ++G L++ P+V++A G  + + ++   +G+ V++ G G  G+LG GS
Sbjct: 68  GHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVS--KAGL-VFAWGWGHFGQLGVGS 123

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
             +   P  ++   L  ++   VA G+ H AVV + G V TWGWG  G LGHG++  +S 
Sbjct: 124 THNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSR 181

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSE-DGDVYSFGCGESASLGHNA--IADGQGNRHAN 310
           P  V+ L+ +    +A G   T VVSE D  V+S+G  E   LGH    I  G  NR   
Sbjct: 182 PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNR--- 238

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +P+ +  L+Q+               +++T AL+  G +YAFG G  GQLG
Sbjct: 239 --SPRPIKDLQQIACG------------SSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 141/284 (49%), Gaps = 23/284 (8%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAG----RTMLISDAGQVYAFGKDSFGE 78
            +G   L   +  G+P    +LQG+ ++  A G G     +  +++ GQVY +G    G+
Sbjct: 7   NDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQ 66

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
             +G   ++ +  P+L+  L++  +V+ A G+  T V+S+ G V+ + WG+  +LG  + 
Sbjct: 67  LGHG--DSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGST 124

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            N  +P  +  +L+ + V ++A G  +   +    SG  VY+ G G+ G+LGHG    + 
Sbjct: 125 HNSNDPVQVT-SLDGVKVCKVACGSAHTAVVT--ESGH-VYTWGWGVNGQLGHGDDASQS 180

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-DGRVCTWGWGRYGCLGHGNEEC-----ES 252
            P  +++   + +    +A G  H  VV + D  V +WGW  YG LGHG  +        
Sbjct: 181 RPMYVKKLHGIYVS--TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNR 238

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            P+ ++ L       +A G   T  +S  GDVY+FG G+   LG
Sbjct: 239 SPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 19/143 (13%)

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG----DYTTFVVSEDGDVYSFGC 289
           +WG+   G LG G  +    P  + AL  +  + VA G    +  +  V+E G VY++G 
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGS 61

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G+S  LGH    D Q     N++ P+L+  L+  +  +V+++  +     AHT  ++++G
Sbjct: 62  GKSGQLGH---GDSQ-----NLVLPRLIVGLQ--SNPIVEVACGS-----AHTVVVSKAG 106

Query: 350 KLYAFGAGDKGQLGIELVNNQTE 372
            ++A+G G  GQLG+   +N  +
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSND 129


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  121 bits (304), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 30/312 (9%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 106
            R I+ + G     LIS++G+++ +GK+  G+  +G+   K+ T+P+ +E  +    ++  
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278

Query: 107  AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
              G   +  +  +  VY  SWG D   +LGH T+        ++  +    +  IAAG+ 
Sbjct: 1279 ECGGEHSICVDSDYVVY--SWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-----VVVAAG 219
            + + L  + SG  +YS G G  G+LGHGS   +  P  IE   ++ +Q        +A G
Sbjct: 1337 HTIVL--KKSG-ELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACG 1393

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
              H+ +   +G V +WG G+ G LGHGN E  + P++++AL  V  I  + G + T   +
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATT 1451

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            +  +VYS+G GE   LGH +          N  TP++V    Q N   +   L       
Sbjct: 1452 DLKNVYSWGLGEHMKLGHGS--------DKNEATPRVVDFFIQKNVSKIVCGLN------ 1497

Query: 340  AHTFALTESGKL 351
             HT  LT  G L
Sbjct: 1498 -HTITLTYPGDL 1508



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 118/238 (49%), Gaps = 23/238 (9%)

Query: 136  HTEPNDVEPHPLLGTLENIPV------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
            H++   ++P P L      P+      ++++ G+ ++  ++   SG  +++ G    G+L
Sbjct: 1194 HSKSIKLKPDPELMICPMPPLKNEKRAIKVSCGWDHVALIS--ESG-ELFTWGKNQSGQL 1250

Query: 190  GHGSRTD--EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
            GHG      +  P+ +E F+     P++ V  G  H+  V  D  V +WG  ++G LGHG
Sbjct: 1251 GHGLDIGKIQTTPKRLEFFR--GKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG 1308

Query: 247  NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
             +   ++ PK+++ ++  K   +A G   T V+ + G++YSFG G+   LGH +      
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368

Query: 306  NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + T   +  ++    ++ QI+         H+   +++G++Y++G G +GQLG
Sbjct: 1369 PTRIELNT---IVGIQHGGGKITQIACGF-----GHSVICSDNGEVYSWGLGKQGQLG 1418



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 71/329 (21%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     + G +I   AAG   T+++  +G++Y+FG    G+  +G   +K + +   + +
Sbjct: 1317 PKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNT 1376

Query: 98   LKNI-----FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            +  I      + Q A G   + + S  G VY++  G   +LGH    +   P  L+  L+
Sbjct: 1377 IVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPR-LIEALK 1435

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
               V +I+ G+ Y +A     +   VYS G G   KLGHGS  +E  PR+++ F   N+ 
Sbjct: 1436 G--VTKISCGHFYTMATTDLKN---VYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVS 1490

Query: 213  PVVVAAGAWHAAVV------------------------------------------GQDG 230
             +V   G  H   +                                          G+ G
Sbjct: 1491 KIV--CGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSG 1548

Query: 231  R-----------VCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVATGDYT 274
            R           +   G G +G LG G +       + +P  ++ +N +  I ++ G   
Sbjct: 1549 RLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDF 1608

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADG 303
            T +++ +G +Y +G G    +G+    D 
Sbjct: 1609 TAMITSNGALYVWGYGNFGQIGNGKTDDA 1637



 Score = 48.9 bits (115), Expect = 0.004,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 101/250 (40%), Gaps = 20/250 (8%)

Query: 25   GKRNLLGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AE 80
            GK+  LG    E    P    +L+G+  I  + G   TM  +D   VY++G    GE  +
Sbjct: 1412 GKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATTDLKNVYSWG---LGEHMK 1466

Query: 81   YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
             G    K   +P++V+      V +   G   T  L+  G +   S  ND  +       
Sbjct: 1467 LGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFI--- 1523

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT----- 195
            D+ P     +  +        G    L L        +Y+ G G  GKLG G        
Sbjct: 1524 DLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFF 1583

Query: 196  DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
            D+  P  I+    LNL  + ++ G    A++  +G +  WG+G +G +G+G  +   VP 
Sbjct: 1584 DKPIPTAIKGVNALNL--IDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPI 1641

Query: 256  VVQALNDVKA 265
             +  L D KA
Sbjct: 1642 RI-PLTDSKA 1650


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +VT PQ    + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 22  IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQ--- 78

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LGH +  D    PRLI++ 
Sbjct: 79  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG  R+G LG G E   ++ P+ V++L  + 
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D Q   H  +L  Q         
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  +V  A 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK----PEQIGALADQHIVHVAC 92

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+++++  G+D +LGH T  + V    L+  L    ++Q++ G  + +A
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA        ++ G    G+LG G     +  P+ ++  + + L    VAAG  H+  + 
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 268 GAGSFGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 312

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 135/271 (49%), Gaps = 12/271 (4%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G+  +       
Sbjct: 67  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS- 125

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 147
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+      +LG   E P+   P   
Sbjct: 126 VAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR- 184

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG    TD + P  +   +
Sbjct: 185 VKSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---K 238

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           LL  Q VV ++ G  H AV+ + G V T+G G +G LGH +   E  P+ V  L   +  
Sbjct: 239 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVT 298

Query: 267 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 299 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL+GI + Q AAG   +  +S +G V+ +G+++ G  + G+    
Sbjct: 172 LGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAG--QLGLSDET 229

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 230 DRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV 289

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++
Sbjct: 290 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 343



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           W  G  G +    +   + P+    ++D     VA G   +  + EDG+VY+ G      
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQ 66

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH    + +GN+      P+ + +L   ++ +V ++   S     H+ AL++ G+L+++
Sbjct: 67  LGH----EREGNK------PEQIGAL--ADQHIVHVACGES-----HSLALSDQGQLFSW 109

Query: 355 GAGDKGQLG 363
           GAG  GQLG
Sbjct: 110 GAGSDGQLG 118


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 168/330 (50%), Gaps = 26/330 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P +  +L  + ++Q A G+     ++  G+VYA G+ + G    G+  +  V  P+ V +
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMS-SGTVPIPRQVTA 2745

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L +  V + A+  G      L+ +G+V+++  G+D +LGH +  N  +P  L+  L+   
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKR 2804

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +  P++++   LL  + + 
Sbjct: 2805 IRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQ 2859

Query: 216  VAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            VA G+  A  +    +G V +WG G +G LG G  E  +VP+ ++ LN      +  G  
Sbjct: 2860 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2919

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +++ G V+++G G+   LGH +          +V  PQ+V  L+   +++V +++ 
Sbjct: 2920 FSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEGLR--GKKIVHVAVG 2969

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   H  A+T++G++YA+G  D GQ G
Sbjct: 2970 A-----LHCLAVTDAGQVYAWGDNDHGQQG 2994



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 37/282 (13%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   + L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 440 VIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 488

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ Y LALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604

Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           K I VA  +GD     V+++G V+S+G G+   LG    +DG         TP+L+  L+
Sbjct: 605 KVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  VV++   +       + ALT+ G++Y++G GD  +LG
Sbjct: 657 DLD--VVKVRCGSQF-----SVALTKDGQVYSWGKGDNQRLG 691



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 39/331 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+  + L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 488

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V  +G+V +WG G YG LG G  +    PK+++ L D+  + V  
Sbjct: 606 VIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +++DG VYS+G G++  LGH            +V  P+L+ +L+   ++V+ +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEALQ--GKKVIDV 715

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +  ++     H  ALTE  +++++G  D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGNNDQCQ 741



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 146/328 (44%), Gaps = 31/328 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R +Q   G      ++  G++YA G  +      GV GT+ V++P L+ES
Sbjct: 3655 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGVGGTESVSAPTLLES 3712

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++F+ + A+  G      LS EG VY++    D +LGH        P  ++ +L    
Sbjct: 3713 IQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VVESLRGTE 3771

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VV IAAG  +    AC  S   +Y+ G G  G+LGH    D+  P+L+E  Q   +  V 
Sbjct: 3772 VVDIAAGGAHS---ACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 3828

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              +G      +  D  V +WG G YG LG G  +   VP  V     V         +  
Sbjct: 3829 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPR 3888

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              V   GD +  G G                   +V  P+ V  L+   ++V+ I+ T S
Sbjct: 3889 LDVGGKGDYHRLGHGSD----------------DHVRRPRQVQGLQ--GKKVIAIA-TGS 3929

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +    H    TE G++Y +G  D+GQLG
Sbjct: 3930 L----HCVCCTEEGEVYTWGDNDEGQLG 3953



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 18/300 (6%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G      ++  G+V+++G+   G+   G         P+L+E+LK   +   
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHFSRMNCDKPRLIEALKTKRIRDI 2808

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A L+  G +YT+  G   RLGH      ++P  ++  L    V+Q+A G    
Sbjct: 2809 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDA 2867

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAV 225
              LA    G+ V+S G G  GKLG G       P+ IE+   LN Q V  +  GA  +  
Sbjct: 2868 QTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNVPQNIER---LNGQGVCQIECGAQFSLA 2923

Query: 226  VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
            + + G V TWG G Y  LGHG++     P+VV+ L   K +HVA G      V++ G VY
Sbjct: 2924 LTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVY 2983

Query: 286  SFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            ++G  +            QGN    V   P LV  L+      V    ++S+ W     A
Sbjct: 2984 AWGDNDHGQ---------QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMA 3034



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 84/139 (60%), Gaps = 5/139 (3%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E    P+    L+G+++I  A G+G  + + ++D GQV+++G   +G  + G  G+    
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYG--KLGRGGSDGCK 647

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+L+E L+++ VV+   G+ F+  L+++G+VY++  G++ RLGH TE +   P  LL  
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEA 706

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L+   V+ +AAG  + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 19/251 (7%)

Query: 115  VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             LS  G    + WG++ R  LG         P P    L  +  VQ+  G   L A+   
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 3680

Query: 173  PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             +   +Y+ G G GG+LG G       P L+E  Q + ++ V V +G  H   +  +G V
Sbjct: 3681 -ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG    G LGHGN      P+VV++L   + + +A G   +  V+  GD+Y++G G  
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY 3799

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LGH+   D         L P+LV +L+    RVV ++  +    +A T  LT+   ++
Sbjct: 3800 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDVACGSG---DAQTLCLTDDDTVW 3846

Query: 353  AFGAGDKGQLG 363
            ++G GD G+LG
Sbjct: 3847 SWGDGDYGKLG 3857



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 52/293 (17%)

Query: 33   EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
            E    P    S+Q + I + A  +G    + +S  G+VY++G+   G+  +G +      
Sbjct: 3702 ESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CD 3759

Query: 91   SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
             P++VESL+   VV  A G   +A ++  G +YT+  G   RLGH    + ++P  L+  
Sbjct: 3760 RPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEA 3818

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-------------------------- 184
            L+   VV +A G      L C      V+S G G                          
Sbjct: 3819 LQGHRVVDVACGSGDAQTL-CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVG 3877

Query: 185  -------------LGGK-----LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
                         +GGK     LGHGS    + PR ++  Q    + + +A G+ H    
Sbjct: 3878 RPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCC 3935

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             ++G V TWG    G LG G       P++V AL   K   VA G   T   S
Sbjct: 3936 TEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWS 3988



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P   + L G R+IQ A G+   +T+ ++D G V+++G   FG  + G  G++    PQ +
Sbjct: 2846 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNVPQNI 2903

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L    V Q   G  F+  L++ G V+T+  G+  RLGH ++ +  +P  + G L    
Sbjct: 2904 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 2962

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V +A G  + LA+        VY+ G    G+ G+G+ T  + P L++  +   +    
Sbjct: 2963 IVHVAVGALHCLAVT---DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI--TR 3017

Query: 216  VAAGAWHA 223
            VA G+ H+
Sbjct: 3018 VACGSSHS 3025



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQ + +++   G+  ++ ++  GQVY++GK       +G +  + V  P+L+E
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
           +L+   V+  A G+     L+ +  V+  SWGN+ +  H    +  +P P LL  L+   
Sbjct: 706 ALQGKKVIDVAAGSTHCLALTEDSEVH--SWGNNDQCQHFDTLHQTKPEPSLLPGLDTKH 763

Query: 156 VVQIAAG 162
           +V IA G
Sbjct: 764 IVGIACG 770



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 52/230 (22%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    SL+G  ++  AAG   +  ++ AG +Y +GK  +G   +  
Sbjct: 3747 DGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD 3806

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTF---------------- 125
               +L   P+LVE+L+   VV  A G  +  T  L+ +  V+++                
Sbjct: 3807 SEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 3864

Query: 126  --------------------SW--------GNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
                                SW        G+  RLGH ++ +   P  + G L+   V+
Sbjct: 3865 KVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVI 3923

Query: 158  QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
             IA G   L  + C   G  VY+ G    G+LG G+    + PRL+   Q
Sbjct: 3924 AIATGS--LHCVCCTEEG-EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3970



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 253  VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            VP   + L+ +  + VA G  + F V+ +G VY+ G   +  L       G G     V 
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL-------GLGMSSGTVP 2738

Query: 313  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             P+ VT+L     + V +          H  ALT  GK++++G GD G+LG
Sbjct: 2739 IPRQVTALSSYVVKKVAVHSGGR-----HATALTVDGKVFSWGEGDDGKLG 2784


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 24/318 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  +AGA  +  +     V ++G+   G+  +G    + V  P ++ S     V     
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 109 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G   T   S  E ++Y++ WG+  RLGH    +   P P++  L+ + + QIA G  + L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            +        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H   + 
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           + G +  WGWGRYG LG  + +  SVP+ V ++   K + VA G   +  VS  G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P+ + +LK V   + QIS      W  HT A+ E
Sbjct: 255 GWSKYGQLGHGDFQDH--------LVPRKLEALKDV--PISQISGG----WR-HTMAVAE 299

Query: 348 SGKLYAFGAGDKGQLGIE 365
            GKLY +G    GQ+G+E
Sbjct: 300 DGKLYGWGWNKFGQVGVE 317



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 27/344 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    S    R+     GA  T+  SD   Q+Y++G   FG   +G   +  V +PQ + 
Sbjct: 64  PTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIV 121

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ + + Q A G+     ++  G+V+++    + +LG     + + P  +    E + V
Sbjct: 122 ALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCV 180

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             IAAG  +  A+     G  +Y  G G  G LG   R D   P  +   +   +  V+V
Sbjct: 181 KMIAAGAEHTTAIT---EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLV 235

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G  H+  V   G + T+GW +YG LGHG+ +   VP+ ++AL DV    ++ G   T 
Sbjct: 236 ACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTM 295

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V+EDG +Y +G  +   +G     D       N    Q          ++VQ++     
Sbjct: 296 AVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ----------KIVQVACG--- 342

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            W  HT ALTE+  ++++G G  GQLG   +    +R  P+ +D
Sbjct: 343 -WR-HTLALTENKNIFSWGRGASGQLGHGEI---IDRNTPKMID 381



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 18/295 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG++I Q A G    + ++  GQV+++G++  G+   G     L+  PQ +++ + + 
Sbjct: 122 ALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVC 179

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V   A G   T  ++  G +Y + WG    LG     +   P  +  ++E   +V +A G
Sbjct: 180 VKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACG 238

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + + ++++   S  A+Y+ G    G+LGHG   D   PR +E  + +   P+   +G W 
Sbjct: 239 WRHSVSVS---SSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWR 292

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H   V +DG++  WGW ++G +G  +      P  V   ++ K + VA G   T  ++E+
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +++S+G G S  LGH  I D          TP+++ +L        Q+  +N +
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 21/250 (8%)

Query: 24  NGKRNLLGREVNGT-----------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           NG+ +  GR  NG            P   ++ +G+ +   AAGA  T  I++ G +Y +G
Sbjct: 144 NGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
              +G    G+      + P+ V S++   +V  A G   +  +S  G +YT+ W    +
Sbjct: 204 WGRYG--NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LGH    + + P  L   L+++P+ QI+ G+ + +A+A       +Y  G    G++G  
Sbjct: 262 LGHGDFQDHLVPRKLE-ALKDVPISQISGGWRHTMAVA---EDGKLYGWGWNKFGQVGVE 317

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
              D   P    +    + Q +V  A  W H   + ++  + +WG G  G LGHG     
Sbjct: 318 DNVDHCSPV---EVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 252 SVPKVVQALN 261
           + PK++ AL+
Sbjct: 375 NTPKMIDALS 384


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 154/318 (48%), Gaps = 24/318 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  +AGA  +  +     V ++G+   G+  +G    + V  P ++ S     V     
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 109 GNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G   T   S  E ++Y++ WG+  RLGH    +   P P++  L+ + + QIA G  + L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIV-ALQGMKIKQIACGDSHCL 139

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            +        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H   + 
Sbjct: 140 TVTFNGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK--MIAAGAEHTTAIT 194

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           + G +  WGWGRYG LG  + +  SVP+ V ++   K + VA G   +  VS  G +Y++
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH    D         L P+ + +LK V   + QIS      W  HT A+ E
Sbjct: 255 GWSKYGQLGHGDFQDH--------LVPRKLEALKDV--PISQISGG----WR-HTMAVAE 299

Query: 348 SGKLYAFGAGDKGQLGIE 365
            GKLY +G    GQ+G+E
Sbjct: 300 DGKLYGWGWNKFGQVGVE 317



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 27/344 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    S    R+     GA  T+  SD   Q+Y++G   FG   +G   +  V +PQ + 
Sbjct: 64  PTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG--NSSDVFNPQPIV 121

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ + + Q A G+     ++  G+V+++    + +LG     + + P  +    E + V
Sbjct: 122 ALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIK-AFEGVCV 180

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             IAAG  +  A+     G  +Y  G G  G LG   R D   P  +   +   +  V+V
Sbjct: 181 KMIAAGAEHTTAIT---EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKM--VLV 235

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G  H+  V   G + T+GW +YG LGHG+ +   VP+ ++AL DV    ++ G   T 
Sbjct: 236 ACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTM 295

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V+EDG +Y +G  +   +G     D       N    Q          ++VQ++     
Sbjct: 296 AVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ----------KIVQVACG--- 342

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            W  HT ALTE+  ++++G G  GQLG   +    +R  P+ +D
Sbjct: 343 -WR-HTLALTENKNIFSWGRGASGQLGHGEI---IDRNTPKMID 381



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 18/295 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG++I Q A G    + ++  GQV+++G++  G+   G     L+  PQ +++ + + 
Sbjct: 122 ALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL--PQKIKAFEGVC 179

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V   A G   T  ++  G +Y + WG    LG     +   P  +  ++E   +V +A G
Sbjct: 180 VKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKV-SSVEGEKMVLVACG 238

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + + ++++   S  A+Y+ G    G+LGHG   D   PR +E  + +   P+   +G W 
Sbjct: 239 WRHSVSVS---SSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV---PISQISGGWR 292

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H   V +DG++  WGW ++G +G  +      P  V   ++ K + VA G   T  ++E+
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +++S+G G S  LGH  I D          TP+++ +L        Q+  +N +
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRN--------TPKMIDALSLDGSACKQLESSNVV 399



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 21/250 (8%)

Query: 24  NGKRNLLGREVNGT-----------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           NG+ +  GR  NG            P   ++ +G+ +   AAGA  T  I++ G +Y +G
Sbjct: 144 NGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
              +G    G+      + P+ V S++   +V  A G   +  +S  G +YT+ W    +
Sbjct: 204 WGRYG--NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LGH    + + P  L   L+++P+ QI+ G+ + +A+A       +Y  G    G++G  
Sbjct: 262 LGHGDFQDHLVPRKLE-ALKDVPISQISGGWRHTMAVA---EDGKLYGWGWNKFGQVGVE 317

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
              D   P    +    + Q +V  A  W H   + ++  + +WG G  G LGHG     
Sbjct: 318 DNVDHCSPV---EVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 252 SVPKVVQALN 261
           + PK++ AL+
Sbjct: 375 NTPKMIDALS 384


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 2993 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 3051

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L+   V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3052 GLGV--THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3109

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG  T +
Sbjct: 3110 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNTTQ 3165

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 3166 LKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 3223

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3224 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3275

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3276 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3316



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4072 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4129

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4130 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4188

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4189 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4243

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  + V  G 
Sbjct: 4244 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGS 4303

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4304 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4352

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4353 TGSL----HCVACSDSGEVYTWGDNDEGQLG 4379



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 3130

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 3131 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDA 3189

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  V +  GA  +  +
Sbjct: 3190 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLAL 3246

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3247 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3306

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G GN   N   P LV  L  V    V    ++SI W
Sbjct: 3307 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3350



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4182

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4183 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4241

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  V 
Sbjct: 4242 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVK 4298

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4299 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4358

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4359 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4406

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4407 ---SAHTLALSTS 4416



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 42/335 (12%)

Query: 33  EVNGTP-LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           E  G P L CR     +I Q A    + +++S  G++Y + + +  EAE           
Sbjct: 561 ESAGVPTLSCR----FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE----------- 604

Query: 92  PQLVESL-KNIFVVQA--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           P  +E +  ++F+  A    G  F A+ S     Y++  G D RLGH        P  + 
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI- 662

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             LE   V  +  G  Y  A+ C   G  + + G G   +LGHG+  D   P L+     
Sbjct: 663 AALEQHCVQSVYCGCSYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD 719

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             +  V + +G  H+  +  +G V  WG G YG LG+GN      P +V++L  V+   V
Sbjct: 720 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RV 777

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERV 327
             G   +  +S +G +Y++  G++  LGH  +    QG        P+LV+SL+  ++R+
Sbjct: 778 FAGSQFSVALSSEGQLYTW--GKATCLGHQLVERSVQG-----CSVPRLVSSLQ--HKRI 828

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           V ++++      AH  AL+ SG+++ +G  D  Q+
Sbjct: 829 VDVAVS-----VAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 39/312 (12%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 122
           ++YA G  S  + + G      ++       V +L   F + Q A       +LS+EG++
Sbjct: 534 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 593

Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           YT+               + EP P+     ++  + IA G+C         S    YS G
Sbjct: 594 YTWRLAKP----------EAEPLPMEEVAHDV-FISIA-GHCEGRHFLAIDSNHNAYSWG 641

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
            G   +LGHG       P  I   +   +Q V    G  ++A +   G + TWG G Y  
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 699

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           LGHGN +  S+P +V AL+D   + VA  +GD  +  ++ +G V+++G G+   LG+   
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 756

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
               GN + + L P LV SL +V +RV   S          + AL+  G+LY +G     
Sbjct: 757 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSVALSSEGQLYTWGKATC- 801

Query: 361 QLGIELVNNQTE 372
            LG +LV    +
Sbjct: 802 -LGHQLVERSVQ 812



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L+Q   + V +          H  ALT  GK+
Sbjct: 3048 NGRL-------GLGVTH-NVPLPHQLPVLRQYVVKKVAVHSGGK-----HALALTLDGKV 3094

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3095 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3120



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 3280 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3337

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3338 NRVACGS 3344



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQL 94
           P+   SL   R+ +  AG+  ++ +S  GQ+Y +GK +  G    E  VQG  +   P+L
Sbjct: 765 PILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRL 819

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--L 151
           V SL++  +V  A+       LS  G V  F WG ND++      P  V   PLL T  L
Sbjct: 820 VSSLQHKRIVDVAVSVAHCLALSSSGEV--FGWGRNDSQ---QICPASVSSEPLLRTPIL 874

Query: 152 ENIPVVQIAAGYC 164
            ++P    +   C
Sbjct: 875 VSLPTFPASGIAC 887


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH +E +  EP   +G L    +V +A G  + +AL+ Q     V+S G G  G
Sbjct: 61  NTKGQLGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ ++ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+ + +L    +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PEPIGALAGQHIVHVAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+V+++  G+D +LG  T  + V    L+  L    ++QI+ G  + LA
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA   +    ++ G    G+LG G     +  P+ ++    + L    VAAG  H+  + 
Sbjct: 152 LA---ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL--AQVAAGGAHSFALS 206

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVSQIACGRH-----HTLAFVP 311

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 312 SSGMIYAFGCGTRGQLG 328



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G+ P    +L G  I+  A G   ++ +SD GQV+++G  S G+   G+   + 
Sbjct: 66  LGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL--GLTTIED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            VT P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 AVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L+ IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VKSLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATGDYTTF-VVSEDGDVYSFGCGESASLG 296
             +A G + T   V   G +Y+FGCG    LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL GI + Q AAG   +  +S +G V+ +GK+S G+   G+   +
Sbjct: 171 LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDER 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L++  VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVSQIACGRHHTLAFV--PSSGMIYAFGCGTRGQLGTGHTCNVKCP 338


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 35/332 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK---LVTSPQLVESLKNIFVVQ 105
           ++  +AGA  ++ +   G V ++G+   G+  +G    +    V +    ++   +  V 
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
               +  TA    E ++Y++ WG+  RLGH    +   P P+   L+ + + QIA G  +
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQ-ALQGVRITQIACGDSH 140

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+        V+S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A 
Sbjct: 141 CLAVTVAGH---VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVK--MIAAGAEHTAA 195

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG +  WGWGRYG LG G+ +   +P+ V ++N  K + VA G   T  VS  G +Y
Sbjct: 196 VTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIY 255

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN---ERVVQI----------SL 332
           ++G  +   LGH    D         L P  + +LK      E  V++           +
Sbjct: 256 TYGWSKYGQLGHGDFEDH--------LVPHKLEALKDTTISQEEAVELIFFFLGDEGFRV 307

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              I W     AL   GKLY +G    GQ+G+
Sbjct: 308 GGGIQW-----ALAADGKLYGWGWNKFGQVGV 334



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 161/356 (45%), Gaps = 36/356 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQG+RI Q A G    + ++ AG V+++G++  G+   G+  T+    PQ +++
Sbjct: 120 PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKIQA 177

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  ++    +V
Sbjct: 178 FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV-SSVNGQKMV 236

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------------ 205
            +A G+ + + ++   S  ++Y+ G    G+LGHG   D   P  +E             
Sbjct: 237 LVACGWRHTITVS---SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAV 293

Query: 206 ---FQLLNLQPVVVAAG-AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
              F  L  +   V  G  W  A    DG++  WGW ++G +G G+ E    P  V   N
Sbjct: 294 ELIFFFLGDEGFRVGGGIQWALAA---DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPN 350

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           + K + VA G   T  ++E  +V+S+G G S  LGH  I D       N+  P+++ +L 
Sbjct: 351 EQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVD------RNI--PKMIDALS 402

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
                  Q+  + ++  +A  +      + YA    +K   GI    N TE   P+
Sbjct: 403 SDGSACKQLESSKAVPMSAKVW--VSPSERYAIVPDEKAGKGIP-AGNGTETHVPQ 455


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 144/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +VT PQ    + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 22  IVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 78

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LGH +  D    PRLI++ 
Sbjct: 79  IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDGQLGHTTTEDSVAIPRLIKK- 134

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG  R+G LG G E   ++ P+ V++L  + 
Sbjct: 135 --LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIP 192

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D Q   H  +L  Q         
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ--------- 243

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 244 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV---NPRRV 289



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +L +  ++  A 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVAC 92

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+++++  G+D +LGH T  + V    L+  L    ++Q++ G  + +A
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA        ++ G    G+LG G     +  P+ ++  + + L    VAAG  H+  + 
Sbjct: 153 LAADGQ---FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPL--AQVAAGGAHSFALS 207

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 268 GAGSFGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ-----HTLAFVP 312

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 313 SSGLIYAFGCGARGQLG 329



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 12/271 (4%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G+  +       
Sbjct: 67  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDS- 125

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 147
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+      +LG   E P+   P   
Sbjct: 126 VAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQR- 184

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG    TD + P  +   +
Sbjct: 185 VKSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGRNNAGQLGLSDETDRQSPCHV---K 238

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           LL  Q VV ++ G  H AV+ + G V T+G G +G LGH +   E  P+ V  L   +  
Sbjct: 239 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVT 298

Query: 267 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 299 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL+GI + Q AAG   +  +S +G V+ +G+++ G+   G+    
Sbjct: 172 LGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQL--GLSDET 229

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 230 DRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRV 289

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 290 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCP 339



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           W  G  G +    +   + P+    ++D     VA G   +  + EDG+VY+ G      
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQ 66

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH    + +GN+      P+ + +L   ++ ++ ++   S     H+ AL++ G+L+++
Sbjct: 67  LGH----EREGNK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQGQLFSW 109

Query: 355 GAGDKGQLG 363
           GAG  GQLG
Sbjct: 110 GAGSDGQLG 118


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 29/331 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +L G  I+  AA    T  ++D G+VY  G +  G+   GV+G +    P  V 
Sbjct: 25  TPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQ--LGVRGMEEQVVPIRVA 82

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP--NDVEPHPLLGTLE 152
           +L    V   A G   T  ++  G +   SWG D   +LG  +    + V+P  + G+  
Sbjct: 83  ALDTHMVTHIACGFKHTVAVTETGALA--SWGGDEYGQLGFDSGNIVDGVQPRIVKGS-R 139

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           ++   ++AAG  + LAL        VYS G G  G LGHG+      P L++   L  L 
Sbjct: 140 DLHFSRVAAGGYHTLALTGSGD---VYSFGDGSSGALGHGNLDGCSTPSLVKS--LWGLG 194

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +A G  H+A +  DG+V TWG G+YG LGHG+ +   +P  V+AL D   I +A G 
Sbjct: 195 VTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGG 254

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++ DG ++S+G G     GH    D        VL+P+ V  L+     +VQ+S 
Sbjct: 255 DHTLAITSDGRLFSWGHGLWGQTGHGTKED--------VLSPKQVHQLE--GRVLVQVSA 304

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   HT  L + G++Y +G  ++ QLG
Sbjct: 305 GAR-----HTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 6/272 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  + G E    P+   +L    +   A G   T+ +++ G + ++G D +G+  +   
Sbjct: 65  GQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSG 124

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
                  P++V+  +++   + A G + T  L+  G VY+F  G+   LGH        P
Sbjct: 125 NIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTP 184

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L+ +L  + V QIA G  +  AL        V++ G G  G+LGHGS  + K P  ++
Sbjct: 185 -SLVKSLWGLGVTQIACGENHSAALTVDGK---VFTWGRGKYGQLGHGSTQNIKLPVAVK 240

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L++   + +A G  H   +  DGR+ +WG G +G  GHG +E    PK V  L    
Sbjct: 241 --ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRV 298

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            + V+ G   T V+ + G+VY +G  E   LG
Sbjct: 299 LVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 19/191 (9%)

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           G+AVY++G G  G+LG G  +D  HP       L+    V +AA  +H A +  +G V T
Sbjct: 1   GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            G    G LG    E + VP  V AL+     H+A G   T  V+E G + S+G  E   
Sbjct: 59  TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118

Query: 295 LGHNA--IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
           LG ++  I DG        + P++V   + ++   V            HT ALT SG +Y
Sbjct: 119 LGFDSGNIVDG--------VQPRIVKGSRDLHFSRVAAG-------GYHTLALTGSGDVY 163

Query: 353 AFGAGDKGQLG 363
           +FG G  G LG
Sbjct: 164 SFGDGSSGALG 174



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G  G LG G+      P  +  L     +H+A  DY T  ++++G+VY+ G  ++  L
Sbjct: 8   GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G   + +         + P  V +L      V  I+         HT A+TE+G L ++G
Sbjct: 68  GVRGMEE--------QVVPIRVAALD--THMVTHIACGFK-----HTVAVTETGALASWG 112

Query: 356 AGDKGQLGIELVN 368
             + GQLG +  N
Sbjct: 113 GDEYGQLGFDSGN 125


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 27/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+I  +AGA  T+ +     V ++G+   G+  +G    + +  P ++ +L +  +    
Sbjct: 15  RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL--PLVISALDDCEISSIT 72

Query: 108 IGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S   R VY++ WG+  RLGH    +   P  + G L+ + + QIA G  + 
Sbjct: 73  CGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHC 131

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+        V+S G    G+LG G   D   P  +  F+ + ++  ++AAGA H A V
Sbjct: 132 LAITGDGE---VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVK--MLAAGAEHTAAV 186

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            + G++  WGWGRYG LG G+     VP  V A+   K   VA G   T  V+  G++Y+
Sbjct: 187 TESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYT 246

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   LGH    D         L P  V +LK    + V      S  W  HT AL 
Sbjct: 247 FGWSKYGQLGHGDFED--------HLVPHQVQALKNKTIQAV------SGGWR-HTVALD 291

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           E G+LY +G    GQ+G     N  +  +P+ +
Sbjct: 292 EDGELYGWGWNKFGQVG---CGNTDDHNSPKLI 321



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 166/348 (47%), Gaps = 33/348 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           PL   +L    I     GA  T   S++ + VY++G   FG   +G      +  P+ ++
Sbjct: 57  PLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFI--PRAIK 114

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIP 155
            LK + + Q A G+     ++ +G V+++    + +LG  HTE  DV     +   E I 
Sbjct: 115 GLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTE--DVLVPNKVAAFEGIA 172

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQP 213
           V  +AAG  +  A+    SG  +Y  G G  G LG G R D   P  +     + +NL  
Sbjct: 173 VKMLAAGAEHTAAVT--ESGK-LYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL-- 227

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VA G  H   V   G + T+GW +YG LGHG+ E   VP  VQAL +     V+ G  
Sbjct: 228 --VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWR 285

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  + EDG++Y +G  +   +G     D          +P+L+T +  VNE+V +++  
Sbjct: 286 HTVALDEDGELYGWGWNKFGQVGCGNTDDHN--------SPKLITGI--VNEKVTRVTCG 335

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
               W  HT A+T+ G +Y++G G  GQLG     +  +R  P+R+++
Sbjct: 336 ----WR-HTVAITDRGNVYSWGRGTSGQLGH---GDAVDRCVPKRIEL 375



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 8/239 (3%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E    P    + +GI +   AAGA  T  ++++G++Y +G   +G    G
Sbjct: 147 QNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P  V ++    +   A G   T  ++  G +YTF W    +LGH    + +
Sbjct: 207 DRNDRLV--PGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH +   L+N  +  ++ G+ + +AL        +Y  G    G++G G+  D   P+L
Sbjct: 265 VPHQVQ-ALKNKTIQAVSGGWRHTVAL---DEDGELYGWGWNKFGQVGCGNTDDHNSPKL 320

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           I    ++N +   V  G  H   +   G V +WG G  G LGHG+     VPK ++ L+
Sbjct: 321 ITG--IVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLS 377


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 149/319 (46%), Gaps = 38/319 (11%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  ++ +     V ++G+   G+  +G    +L  SP  + +L    VV   
Sbjct: 17  RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALDGHEVVSVT 74

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T   S E     +SWG D             P P+   L  + + QIA G  + L
Sbjct: 75  CGADHTTAYS-ESFTQVYSWGCDL----------FTPQPIK-ALHGLRIKQIACGDSHCL 122

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+        V S G    G+LG G+  D   P+ I+ FQ ++++  +VAAGA H A V 
Sbjct: 123 AVTMDGE---VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVK--MVAAGAEHTAAVT 177

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG +  WGWGRYG LG G+     VP+ V  +  VK + VA G   T  VS  G +Y++
Sbjct: 178 EDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTY 237

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY--WNAHTFAL 345
           G  +   LGH    D         LTP  + +L++        +L + I   W  HT AL
Sbjct: 238 GWSKYGQLGHGDFEDH--------LTPHKLEALQE--------NLISEISGGWR-HTMAL 280

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T  GKLY +G    GQ+G+
Sbjct: 281 TSDGKLYGWGWNKFGQVGV 299



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 135/267 (50%), Gaps = 10/267 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++L G+RI Q A G    + ++  G+V ++G++  G+   G     LV  PQ ++
Sbjct: 99  TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV--PQKIQ 156

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           + + + V   A G   TA ++ +G +Y + WG    LG     + + P  +  T+E + +
Sbjct: 157 AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKV-STVEGVKM 215

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V++A G+ + ++++   S   +Y+ G    G+LGHG   D   P  +E  Q   +  +  
Sbjct: 216 VKVACGWRHTISVS---SSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEI-- 270

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +G W H   +  DG++  WGW ++G +G G+      P  V+  ++ K +H++ G   T
Sbjct: 271 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHT 329

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIAD 302
             V+E  +V+S+G G +  LGH    D
Sbjct: 330 LAVTERQNVFSWGRGTNGQLGHGESID 356



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ +   AAGA  T  +++ G++Y +G   +G    G
Sbjct: 137 QNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 196

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V +++ + +V+ A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 197 DRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 254

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L    EN+ + +I+ G+ + +AL    S   +Y  G    G++G G   D   P  
Sbjct: 255 TPHKLEALQENL-ISEISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGDNVDHCSPV- 309

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q VV  +  W H   V +   V +WG G  G LGHG     ++PK+++ L+
Sbjct: 310 --QVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 367


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 2648 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 2706

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2707 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 2764

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG  T +
Sbjct: 2765 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNTTQ 2820

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 2821 LKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 2878

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 2879 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 2930

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2931 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2971



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 2728 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 2785

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 2786 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDA 2844

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  V +  GA  +  +
Sbjct: 2845 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLAL 2901

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 2902 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 2961

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G GN   N   P LV  L  V    V    ++SI W
Sbjct: 2962 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3005



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 42/335 (12%)

Query: 33  EVNGTP-LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           E  G P L CR     +I Q A    + +++S  G++Y + + +  EAE           
Sbjct: 215 ESAGVPTLSCR----FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE----------- 258

Query: 92  PQLVESL-KNIFVVQA--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           P  +E +  ++F+  A    G  F A+ S     Y++  G D RLGH        P  + 
Sbjct: 259 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI- 316

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             LE   V  +  G  Y  A+ C   G  + + G G   +LGHG+  D   P L+     
Sbjct: 317 AALEQHCVQSVYCGCSYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD 373

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             +  V + +G  H+  +  +G V  WG G YG LG+GN      P +V++L  V+   V
Sbjct: 374 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RV 431

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERV 327
             G   +  +S +G +Y++  G++  LGH  +    QG        P+LV+SL+  ++R+
Sbjct: 432 FAGSQFSVALSSEGQLYTW--GKATCLGHQLVERSVQGCS-----VPRLVSSLQ--HKRI 482

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           V ++++      AH  AL+ SG+++ +G  D  Q+
Sbjct: 483 VDVAVS-----VAHCLALSSSGEVFGWGRNDSQQI 512



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 39/312 (12%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 122
           ++YA G  S  + + G      ++       V +L   F + Q A       +LS+EG++
Sbjct: 188 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 247

Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           YT+               + EP P+     ++  + IA G+C         S    YS G
Sbjct: 248 YTWRLAKP----------EAEPLPMEEVAHDV-FISIA-GHCEGRHFLAIDSNHNAYSWG 295

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
            G   +LGHG       P  I   +   +Q V    G  ++A +   G + TWG G Y  
Sbjct: 296 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 353

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           LGHGN +  S+P +V AL+D   + VA  +GD  +  ++ +G V+++G G+   LG+   
Sbjct: 354 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 410

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
               GN + + L P LV SL +V +RV   S          + AL+  G+LY +G     
Sbjct: 411 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSVALSSEGQLYTWGKATC- 455

Query: 361 QLGIELVNNQTE 372
            LG +LV    +
Sbjct: 456 -LGHQLVERSVQ 466



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 2702

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 2703 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 2749

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 2750 FSWGEGEDGKLG---HGNRTTLDKPRLVE 2775



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 2935 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 2992

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 2993 NRVACGS 2999



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQL 94
           P+   SL   R+ +  AG+  ++ +S  GQ+Y +GK +  G    E  VQG  +   P+L
Sbjct: 419 PILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRL 473

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--L 151
           V SL++  +V  A+       LS  G V  F WG ND++      P  V   PLL T  L
Sbjct: 474 VSSLQHKRIVDVAVSVAHCLALSSSGEV--FGWGRNDSQ---QICPASVSSEPLLRTPIL 528

Query: 152 ENIPVVQIAAGYC 164
            ++P    +   C
Sbjct: 529 VSLPTFPASGIAC 541


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++   G+VYA G+ + G  
Sbjct: 1839 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRL 1897

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 1898 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 1955

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+ TL +  +  +A G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 1956 RTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 2011

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 2012 LKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPH 2069

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 2070 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 2121

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2122 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 2162



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 165/331 (49%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 3000 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAI--PTLLG 3057

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 3058 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 3116

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 3117 NVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPQLVE--ALLGYRAI 3171

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 3172 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 3231

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++  G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 3232 QFSVALTKSGAVYTWSKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 3280

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 3281 TGSL----HCVACSDSGEVYTWGDNDEGQLG 3307



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L++  +   
Sbjct: 1919 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDV 1976

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 1977 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVIQVACGSRDA 2035

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G +V+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 2036 QTLALTEDG-SVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLAL 2092

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 2093 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 2152

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++SI W      L 
Sbjct: 2153 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLE 2204

Query: 347  ESGK 350
            E  +
Sbjct: 2205 EEKR 2208



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 144/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 3053 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 3110

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 3111 EHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQ-LVEALLGYR 3169

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 3170 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 3226

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TW  G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 3227 VECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 3286

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 3287 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 3334

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 3335 ---SAHTLALSTS 3344



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+V ++G VY+ G G 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 1894 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 1940

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 1941 FSWGEGEDGKLG---HGNRTTLDKPRLVE 1966



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 2126 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 2183

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 2184 NRVACGS 2190


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4247 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4304

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4305 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPK-LVEHLHGM 4363

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4364 SVADIACGSAHSAAITA--SGQ-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4418

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4419 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4478

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4479 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4527

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4528 TGSL----HCVACSDSGEVYTWGDNDEGQLG 4554



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 38/353 (10%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+V+A G+ + G  
Sbjct: 3081 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGTNGRL 3139

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3140 GLGV--TYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3197

Query: 138  -----EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
                 +P  VE       L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG
Sbjct: 3198 RTTLDKPRQVE------ALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHG 3248

Query: 193  SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEEC 250
                +  P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG G  E 
Sbjct: 3249 DNATQLKPKLVAA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEG 3306

Query: 251  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
               P  ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  
Sbjct: 3307 SDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH-- 3358

Query: 311  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V  PQ +  L+    RV+ +++        H  A+T+SG++YA+G  D GQ G
Sbjct: 3359 VRKPQPIGGLR--GRRVIHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3404



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+ VE+L+   +   
Sbjct: 3161 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRQVEALRAKKIRDV 3218

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 3219 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALAGRRVVQVACGSRDA 3277

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 3278 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLAL 3334

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3335 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYA 3394

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++SI W      + 
Sbjct: 3395 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDDVFVNRVACGSSHSIAWGLPNATME 3446

Query: 347  ESGK 350
            E  +
Sbjct: 3447 EEKR 3450



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4300 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVS--YDRPKLV 4357

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G+V T+  G   RLGH    + + P  L+  L    
Sbjct: 4358 EHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4416

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE    L +  + 
Sbjct: 4417 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGV--IK 4473

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4474 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4533

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV++L+   + +V+++    
Sbjct: 4534 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVSALQ--GKHIVKVTCG-- 4581

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4582 ---SAHTLALSTS 4591



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 41/342 (11%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
           L CR     ++ Q      + +L+S  G+++A+ + S  EAE           PQ +E  
Sbjct: 583 LSCR----FQVKQVVCSENQVLLLSQEGKLHAW-RLSKPEAE-----------PQPLEEA 626

Query: 99  KN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            +   I +     G  F A+ S     Y++  G D RLGH        P  +   LE   
Sbjct: 627 GHETFISIAGHCEGRHFMAIDSNHN-AYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHC 684

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +  G  Y   + C   G  + + G G   +LGHG+  D   P L+       +  V 
Sbjct: 685 VQSVFCGCTYSAVITC---GGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVA 741

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + +G  H+  +  +G V  WG G YG LG+GN      P +V++L  V+ I    G   +
Sbjct: 742 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYS 799

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
             +S +G VY++  G++  LGH  +    QG        P+LV+SL+  ++R+V +++  
Sbjct: 800 VALSSEGQVYTW--GKATCLGHQLVERSVQG-----CSVPRLVSSLQ--HKRIVDMAVG- 849

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
                AH  AL+ SG+++ +G  D  Q+    V+++    +P
Sbjct: 850 ----VAHCLALSSSGEVFGWGRNDCQQVCPSSVSSEPLLRSP 887



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 131/289 (45%), Gaps = 28/289 (9%)

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL---GHH----- 136
            G++L +S  L+    ++F  QA         L+R    +  SWG  + +   GH+     
Sbjct: 4180 GSQLESSSILLHEDHSLF--QAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQL 4237

Query: 137  --TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
               E + ++       L  +  VQ+A G   L A+   P G  +++ G G GG+LG G  
Sbjct: 4238 GGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--PDG-KLFATGYGSGGRLGVGGS 4294

Query: 195  TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
                 P L+   Q + ++ V V +G  H   +  +G V  WG G  G LGHGN      P
Sbjct: 4295 DSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRP 4354

Query: 255  KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
            K+V+ L+ +    +A G   +  ++  G V ++G G    LGH    D         L P
Sbjct: 4355 KLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQ--------LRP 4406

Query: 315  QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+LG
Sbjct: 4407 KLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKLG 4450



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS++G V++ G G 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  LG             NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3136 NGRLGLGVT--------YNVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3182

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P +V+
Sbjct: 3183 FSWGEGEDGKLG---HGNRTTLDKPRQVE 3208



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++D+GQVYA+G +  G+   G   T +   P LV  L ++FV
Sbjct: 3368 LRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFV 3425

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3426 NRVACGS 3432


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 170/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++   G+VYA G+ + G  
Sbjct: 3102 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRL 3160

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3161 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3218

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+ TL +  +  +A G  +  A++ Q     +Y+ G G  G+LGHG  + +
Sbjct: 3219 RTTLDKPR-LVETLRSKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNSTQ 3274

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 3275 LKPKLVAA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 3332

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3333 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3384

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3385 PIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3425



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4259 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAI--PTLLG 4316

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4317 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4375

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4376 NVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPQLVE--ALLGYRAI 4430

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4431 DIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4490

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4491 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4539

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4540 TGSL----HCVACSDSGEVYTWGDNDEGQLG 4566



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L++  +   
Sbjct: 3182 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDV 3239

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 3240 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPK-LVAALAGRRVIQVACGSRDA 3298

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 3299 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--IQIECGAQFSLAL 3355

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3356 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3415

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++SI W      L 
Sbjct: 3416 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNATLE 3467

Query: 347  ESGK 350
            E  +
Sbjct: 3468 EEKR 3471



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4312 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4369

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4370 EHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQ-LVEALLGYR 4428

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4429 AIDIACGSGDAQTL-CINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 4485

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4486 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4545

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4546 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4593

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4594 ---SAHTLALSTS 4603



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 32/297 (10%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAV-LSREGRVYTFSWGN--DARLG 134
           Y  +  K  T PQL+E + +  +V  A    G  F A+ ++R      +SWGN  D RLG
Sbjct: 598 YNWRMFKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNA----YSWGNGEDHRLG 653

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           H        P  +  TL +  V  +  G  Y  A+ C  SG  +Y+ G G   +LGHG+ 
Sbjct: 654 HGDTHARAVPTKI--TLLDRCVKAVFCGCSYSAAITC--SG-NLYTWGRGTYARLGHGNS 708

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            D+  P ++       +  V + +G  H+  +  +G V  WG   YG LG+GN      P
Sbjct: 709 DDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSP 768

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT- 313
            +V++L  V+   V  G   +  ++ DG +YS+  G+++ LGH  +      R A   + 
Sbjct: 769 VLVESLPKVQ--RVFAGAQFSMALTTDGQLYSW--GKASCLGHQLV-----ERSAQWCSV 819

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           P+L++ L+  ++R+V +++       AH  AL+  G+++ +G  D  Q+    V+++
Sbjct: 820 PRLISGLQ--HKRIVDVAVG-----VAHCLALSSCGEVFGWGRNDSQQICPSSVSSE 869



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+V ++G VY+ G G 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3157 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3203

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3204 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3229



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 15/140 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQL 94
           P    +L    II  A G+G   ++ ++  G VYA+G   +G+   G + G+    SP L
Sbjct: 714 PTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGS---MSPVL 770

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGT 150
           VESL  +  V A  G  F+  L+ +G++Y  SWG  + LGH       +    P  L+  
Sbjct: 771 VESLPKVQRVFA--GAQFSMALTTDGQLY--SWGKASCLGHQLVERSAQWCSVPR-LISG 825

Query: 151 LENIPVVQIAAGYCYLLALA 170
           L++  +V +A G  + LAL+
Sbjct: 826 LQHKRIVDVAVGVAHCLALS 845



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 3389 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3446

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3447 NRVACGS 3453



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 15/173 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+   SL  ++  +  AGA  +M ++  GQ+Y++GK S    +   +  +  + P+L+ 
Sbjct: 767 SPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLIS 824

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIP 155
            L++  +V  A+G      LS  G V  F WG ND++      P+ V   PLL     +P
Sbjct: 825 GLQHKRIVDVAVGVAHCLALSSCGEV--FGWGRNDSQ---QICPSSVSSEPLL----RVP 875

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP--RLIEQF 206
           ++ +A        +AC  S   +++     G  L      D   P  RL++Q 
Sbjct: 876 IL-VALPTLPASGVACTASQSLIWTQSSRQGVPLRCPFVIDPGEPTFRLLDQL 927



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 15/196 (7%)

Query: 48  RIIQAA-AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           R ++A   G   +  I+ +G +Y +G+ ++    +G    + +  P +V +L    ++  
Sbjct: 671 RCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPL--PTVVMALTEHEIIDV 728

Query: 107 AIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGY 163
           A+G  +  +  L+ EG VY +   +  +LG+      + P      +E++P VQ + AG 
Sbjct: 729 ALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSP----VLVESLPKVQRVFAGA 784

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + +AL       +     C LG +L   S      PRLI   Q   +  V VA G  H 
Sbjct: 785 QFSMALTTDGQLYSWGKASC-LGHQLVERSAQWCSVPRLISGLQHKRI--VDVAVGVAHC 841

Query: 224 AVVGQDGRVCTWGWGR 239
             +   G V  +GWGR
Sbjct: 842 LALSSCGEV--FGWGR 855


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 37/350 (10%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L+   +    AG+  ++ I++ G+++ +G +  G   +   GTK    P  V++L N+
Sbjct: 33  KALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPA-GTKSENVPSQVKALSNV 91

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP------ 155
            +VQAAIG +    +  +GR Y +      + G   E  D    P    +  IP      
Sbjct: 92  KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA-IPQRCAPK 150

Query: 156 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             V Q+AAG  + + L  +     V++     G     G  T    P  ++   ++ L  
Sbjct: 151 LIVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDITQISVPVRVQGLDMVRL-- 201

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+ +  + +A G +
Sbjct: 202 --IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 259

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++++G+VY +G GE   LG         N  ++ + PQ V  L    E +VQIS  
Sbjct: 260 HSTALTDNGEVYGWGRGEHGRLGFGD------NDKSSKMVPQKVQLLS--GEEIVQISCG 311

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
            +     H+ A+T  G++++FG GD G+LG      +   G PE V ID+
Sbjct: 312 GT-----HSVAVTSDGRMFSFGRGDHGRLGY---GRKVTTGQPEEVPIDI 353



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 26/288 (9%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA- 79
           N+R    +  G +    P   ++L  ++I+QAA G    + + D G+ YA+G + +G+  
Sbjct: 65  NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 80  -------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
                    G    + +  PQ       + V Q A G   + VL+REG V+T+       
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW------- 175

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
            G    P D+    +   ++ + +V+ IA G  + LAL  Q  G  +++ G    G+LG 
Sbjct: 176 -GQPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGT 231

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G       P  ++    L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  
Sbjct: 232 GDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKS 289

Query: 252 S--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           S  VP+ VQ L+  + + ++ G   +  V+ DG ++SFG G+   LG+
Sbjct: 290 SKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           +G A+ + G G  G+LG G+  + +    I+  +  N+  VV  AG+ ++  + +DG++ 
Sbjct: 3   AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60

Query: 234 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 288
           TWGW + G LGH    + E+VP  V+AL++VK +  A G +    V + G  Y++G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 289 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 313
             CGE      N        IA  Q             G  H+ VLT             
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
           P  +T +  V  RV  + +   I   A H  AL E G L+A+G  + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +  WG G  G LG GN E       ++AL       V  G   +  ++EDG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH A     G +  NV  P  V +L  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPA-----GTKSENV--PSQVKALSNV--KIVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YA+G  + GQ G E    +   G P R DI +
Sbjct: 113 YAWGGNEYGQCG-EEPEKKDNTGRPPRRDIAI 143



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L G+ ++  AAG   +  ++D G+VY +G+   G   +G         PQ V+ 
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQL 299

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH-------PLLGT 150
           L    +VQ + G   +  ++ +GR+++F  G+  RLG+  +    +P        P  G 
Sbjct: 300 LSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR 359

Query: 151 LENIPVVQ--IAAGYCYLLAL 169
            EN   +   +A G  + LAL
Sbjct: 360 TENGHWIAKLVACGGRHTLAL 380


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 24/287 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+  A+AG    + +++ G VY +G  +FG   +G    +L+  P+L+E      +V  +
Sbjct: 136 RVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVS 193

Query: 108 IGNFFTAVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIA 160
            G   TA ++  G +YT  WG D    RLGH   P+ ++      P      ++P+  + 
Sbjct: 194 AGGSHTAAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIALVY 250

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  + +AL    SG  ++S G     +LGHG+R +   P+++   + + L  V VA G 
Sbjct: 251 CGGFFTMALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGG 305

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +HAA + QDG+V TWG+G  G LGHG  E    P +V+A+ D    ++A G   T  ++E
Sbjct: 306 FHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITE 365

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           +GD+Y++G      LG   + D Q       L P LV   + ++E+ 
Sbjct: 366 NGDLYTWGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 157/330 (47%), Gaps = 51/330 (15%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 110
           +V+A+G+ + G+  +G + T+ +  P L+ +LK   F   A I          GN     
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 111 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 168
             F +VL  E  V+ +  G+  RLG  TE N  +P+        I  VQ+A AG  + +A
Sbjct: 94  GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    +   VY+ G G  G LGHGS   E  PRL+E      +  V V+AG  H A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHTAAVTE 204

Query: 229 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
            G + TWG     G LGHGN     E   S P  VQAL DV    V  G + T  +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFFTMALTKSG 263

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++S+G   +  LGH       G R AN   P++V +L+ V   +VQ++         H 
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            ALT+ GK+  +G G  GQLG   + N  E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 22/271 (8%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V  A+ G      L+  G VYT+ +G    LGH +   ++ P  L G  ++  +V ++AG
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAG 195

Query: 163 YCYLLALACQPSGMAVYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAG 219
             +  A+    SG  +Y+ G   G G+LGHG+    DE       + Q L++   +V  G
Sbjct: 196 GSHTAAVT--ESG-ELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCG 252

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            +    + + G++ +WG      LGHG       PKVV AL DV  + VA G +    ++
Sbjct: 253 GFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           +DG V ++G G +  LGH  + +G+         P +V       E +   + T      
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGK--------EPAIV-------EAMADKTCTYIACGP 357

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           A T A+TE+G LY +G     QLGI  + ++
Sbjct: 358 AWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 44/236 (18%)

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 209
           GY      + +P+ + V++ G G  G++GHGS   EK P LI   +L             
Sbjct: 21  GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80

Query: 210 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
                L  V V  G +H+ +  +   V  WG G  G LG   E  +  P V   +  V+ 
Sbjct: 81  PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
              + G      ++E G+VY++G G   +LGH +        +   L P+L+       +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 380
           R+V +S   S     HT A+TESG+LY +G  + +G+LG          GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HTAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 157/318 (49%), Gaps = 24/318 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++  +AGA  T+ +     V ++G+   G+  +G    + +  P  + +L    +   A
Sbjct: 15  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSIA 72

Query: 108 IGNFFTAVLSR-EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G   T   S     +Y++ WG+  RLGH    + + P P++  L+ + + QIA G  + 
Sbjct: 73  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHC 131

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LA+  +     V S G    G+LG G+  D   P+ I+ F+ + ++  +VAAGA H+  +
Sbjct: 132 LAVTMEGE---VQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIK--MVAAGAEHSVAI 186

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            ++G +  WGWGRYG LG G+      P+ V +++  K + VA G   T  VS  G +Y+
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LGH    D         L PQ + +L   ++ + Q+S      W  H+ ALT
Sbjct: 247 YGWSKYGQLGHGNFEDS--------LVPQKLQALS--DKLISQVSGG----WR-HSMALT 291

Query: 347 ESGKLYAFGAGDKGQLGI 364
            +G L+ +G    GQ+G+
Sbjct: 292 STGLLFGWGWNKFGQVGV 309



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG+RI Q A G    + ++  G+V ++G++  G+   G     LV  PQ +++ K + 
Sbjct: 115 ALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV--PQKIQAFKGVP 172

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +   A G   +  ++  G +Y + WG    LG     +   P  +  +++   +V +A G
Sbjct: 173 IKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKV-SSVDCDKMVMVACG 231

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW- 221
           + + ++++   S   +Y+ G    G+LGHG+  D   P   ++ Q L+ + +   +G W 
Sbjct: 232 WRHTISVS---SSGGIYTYGWSKYGQLGHGNFEDSLVP---QKLQALSDKLISQVSGGWR 285

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+  +   G +  WGW ++G +G G+      P  V+   D + + ++ G   T  V+E 
Sbjct: 286 HSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEK 345

Query: 282 GDVYSFGCGESASLGHNAIAD 302
            +V+S+G G +  LGH    D
Sbjct: 346 ENVFSWGRGTNGQLGHGDTID 366



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 26/226 (11%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV- 214
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+ Q + 
Sbjct: 16  VLLISAGASHTVALL---SGNVVCSWGRGEDGQLGHGDTDDRPLP---TQLSALDAQHID 69

Query: 215 VVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            +A GA H     +    + +WGWG +G LGHGN     +P+ + AL  ++   +A GD 
Sbjct: 70  SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 129

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
               V+ +G+V S+G  ++  LG     D         L PQ + + K V  ++V     
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDS--------LVPQKIQAFKGVPIKMVAAGAE 181

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                  H+ A+TE+G+LY +G G  G LG+    ++ +R NPE+V
Sbjct: 182 -------HSVAITENGELYGWGWGRYGNLGL---GDRNDRWNPEKV 217



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +G+ I   AAGA  ++ I++ G++Y +G   +G    G
Sbjct: 147 QNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG 206

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +   +P+ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 207 DRNDRW--NPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  L   L +  + Q++ G+ + +AL    S   ++  G    G++G G   D   P  
Sbjct: 265 VPQKLQ-ALSDKLISQVSGGWRHSMALT---STGLLFGWGWNKFGQVGVGDNLDHCSPV- 319

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +    Q VV  +  W H   V +   V +WG G  G LGHG+    + PK+++AL+
Sbjct: 320 --QVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 37/350 (10%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L+   +    AG+  ++ I++ G+++ +G +  G   +   GTK    P  V++L N+
Sbjct: 33  KALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPA-GTKSENVPSQVKALSNV 91

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP------ 155
            +VQAAIG +    +  +GR Y +      + G   E  D    P    +  IP      
Sbjct: 92  KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA-IPQRCAPK 150

Query: 156 --VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             V Q+AAG  + + L  +     V++     G     G  T    P  ++   ++ L  
Sbjct: 151 LIVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDITQISVPVRVQGLDMVRL-- 201

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+ +  + +A G +
Sbjct: 202 --IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 259

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++++G+VY +G GE   LG         N  ++ + PQ V  L    E +VQIS  
Sbjct: 260 HSTALTDNGEVYGWGRGEHGRLGFGD------NDKSSKMVPQKVQLLS--GEEIVQISCG 311

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
            +     H+ A+T  G++++FG GD G+LG      +   G PE V ID+
Sbjct: 312 GT-----HSVAVTSDGRMFSFGRGDHGRLGY---GRKVTTGQPEEVPIDI 353



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 26/288 (9%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA- 79
           N+R    +  G +    P   ++L  ++I+QAA G    + + D G+ YA+G + +G+  
Sbjct: 65  NQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 80  -------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
                    G    + +  PQ       + V Q A G   + VL+REG V+T+       
Sbjct: 125 EEPEKKDNTGRPPRRDIAIPQ--RCAPKLIVRQVAAGGTHSVVLTREGHVWTW------- 175

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
            G    P D+    +   ++ + +V+ IA G  + LAL  Q  G  +++ G    G+LG 
Sbjct: 176 -GQPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGT 231

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G       P  ++    L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  
Sbjct: 232 GDTQPRSQPIPVQGLSGLTL--VDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKS 289

Query: 252 S--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           S  VP+ VQ L+  + + ++ G   +  V+ DG ++SFG G+   LG+
Sbjct: 290 SKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 44/231 (19%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           +G A+ + G G  G+LG G+  + +    I+  +  N+  VV  AG+ ++  + +DG++ 
Sbjct: 3   AGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVV--AGSRNSLAITEDGKLF 60

Query: 234 TWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 288
           TWGW + G LGH    + E+VP  V+AL++VK +  A G +    V + G  Y++G    
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 289 --CGESASLGHNA-------IADGQ-------------GNRHANVLT------------- 313
             CGE      N        IA  Q             G  H+ VLT             
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
           P  +T +  V  RV  + +   I   A H  AL E G L+A+G  + GQLG
Sbjct: 181 PGDITQIS-VPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +  WG G  G LG GN E       ++AL       V  G   +  ++EDG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH A     G +  NV  P  V +L  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPA-----GTKSENV--PSQVKALSNV--KIVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YA+G  + GQ G E    +   G P R DI +
Sbjct: 113 YAWGGNEYGQCG-EEPEKKDNTGRPPRRDIAI 143



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L G+ ++  AAG   +  ++D G+VY +G+   G   +G         PQ V+ 
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQL 299

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH-------PLLGT 150
           L    +VQ + G   +  ++ +GR+++F  G+  RLG+  +    +P        P  G 
Sbjct: 300 LSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR 359

Query: 151 LENIPVVQ--IAAGYCYLLAL 169
            EN   +   +A G  + LAL
Sbjct: 360 TENGHWIAKLVACGGRHTLAL 380


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 24/287 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+  A+AG    + +++ G VY +G  +FG   +G    +L+  P+L+E      +V  +
Sbjct: 136 RVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELL--PRLLEGPWKDRIVHVS 193

Query: 108 IGNFFTAVLSREGRVYTFSWGND---ARLGHHTEPNDVE----PHPLLGTLENIPVVQIA 160
            G   +A ++  G +YT  WG D    RLGH   P+ ++      P      ++P+  + 
Sbjct: 194 AGGSHSAAVTESGELYT--WGRDEGEGRLGH-GNPDIMDEGALSRPTKVQALDVPIASVY 250

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  + +AL    SG  ++S G     +LGHG+R +   P+++   + + L  V VA G 
Sbjct: 251 CGGFFTMALT--KSGQ-LWSWGGNANHELGHGTRANNWKPKVVAALEDVTL--VQVACGG 305

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +HAA + QDG+V TWG+G  G LGHG  E    P +V+A+ D    ++A G   T  ++E
Sbjct: 306 FHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITE 365

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           +GD+Y++G      LG   + D Q       L P LV   + ++E+ 
Sbjct: 366 NGDLYTWGKNRDYQLGIPGLKDEQ-------LDPVLVQFPQALHEKT 405



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 158/330 (47%), Gaps = 51/330 (15%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAI----------GN----- 110
           +V+A+G+ + G+  +G + T+ +  P L+ +LK   F   A I          GN     
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKL--PVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 111 -FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA-AGYCYLLA 168
             F +VL  E  V+ +  G+  RLG  TE N  +P+        I  VQ+A AG  + +A
Sbjct: 94  GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPY----VNPRIKRVQMASAGGLHNIA 149

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    +   VY+ G G  G LGHGS   E  PRL+E      +  V V+AG  H+A V +
Sbjct: 150 LTEVGN---VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRI--VHVSAGGSHSAAVTE 204

Query: 229 DGRVCTWGWGR-YGCLGHGN-----EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
            G + TWG     G LGHGN     E   S P  VQAL DV    V  G + T  +++ G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFFTMALTKSG 263

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++S+G   +  LGH       G R AN   P++V +L+ V   +VQ++         H 
Sbjct: 264 QLWSWGGNANHELGH-------GTR-ANNWKPKVVAALEDVT--LVQVACGGF-----HA 308

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            ALT+ GK+  +G G  GQLG   + N  E
Sbjct: 309 AALTQDGKVITWGYGGNGQLGHGTLENGKE 338



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 22/271 (8%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V  A+ G      L+  G VYT+ +G    LGH +   ++ P  L G  ++  +V ++AG
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD-RIVHVSAG 195

Query: 163 YCYLLALACQPSGMAVYSVGCGLG-GKLGHGSR--TDEKHPRLIEQFQLLNLQPVVVAAG 219
             +  + A   SG  +Y+ G   G G+LGHG+    DE       + Q L++    V  G
Sbjct: 196 GSH--SAAVTESG-ELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCG 252

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            +    + + G++ +WG      LGHG       PKVV AL DV  + VA G +    ++
Sbjct: 253 GFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           +DG V ++G G +  LGH  + +G+         P +V       E +   + T      
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGK--------EPAIV-------EAMADKTCTYIACGP 357

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           A T A+TE+G LY +G     QLGI  + ++
Sbjct: 358 AWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 44/236 (18%)

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL------------ 209
           GY      + +P+ + V++ G G  G++GHGS   EK P LI   +L             
Sbjct: 21  GYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRM 80

Query: 210 ----NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
                L  V V  G +H+ +  +   V  WG G  G LG   E  +  P V   +  V+ 
Sbjct: 81  PAKPRLGNVGVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQM 139

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
              + G      ++E G+VY++G G   +LGH +        +   L P+L+       +
Sbjct: 140 --ASAGGLHNIALTEVGNVYTWGYGAFGALGHGS--------YERELLPRLLEG--PWKD 187

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD-KGQLGIELVNNQTERGNPERVD 380
           R+V +S   S     H+ A+TESG+LY +G  + +G+LG          GNP+ +D
Sbjct: 188 RIVHVSAGGS-----HSAAVTESGELYTWGRDEGEGRLG---------HGNPDIMD 229


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 25/314 (7%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GN 110
           +AGA  ++ +  +  V ++G+   G+  +G    + V  P L+       +    I   +
Sbjct: 26  SAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVICGAD 83

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             TA    + ++Y++ WG+  RLGH    +   P P+   L+ I + QIA G  + LA+ 
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIE-ALQGIKIKQIACGDSHCLAVT 142

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
                  V+S G    G+LG G+  D   P+ I  F+ + ++  ++AAGA H A + +DG
Sbjct: 143 ---DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVK--MIAAGAEHTAAILEDG 197

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +  WGWG+YG LG G+     VP+ V ++   K + VA G   T  VS  GD+Y++G  
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWS 257

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
           +   LGH    D         L P  + +LK  +  + QI+      W  HT A+   GK
Sbjct: 258 KYGQLGHGDFEDH--------LVPHKLEALK--DRFISQIAGG----WR-HTMAVAGDGK 302

Query: 351 LYAFGAGDKGQLGI 364
           LY +G    GQ+G+
Sbjct: 303 LYGWGWNKFGQVGV 316



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 138/284 (48%), Gaps = 18/284 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +LQGI+I Q A G    + ++DAGQV+++G++  G+   G+  T+    PQ + +
Sbjct: 117 PQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQ--LGLGNTEDSLLPQKIHA 174

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + + V   A G   TA +  +G +Y + WG    LG     + + P  +  ++E   +V
Sbjct: 175 FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKV-SSVEGEKMV 233

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G+ + + ++   S   +Y+ G    G+LGHG   D   P  +E  +   +  +   
Sbjct: 234 LVACGWRHTVTVS---SSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQI--- 287

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AG W H   V  DG++  WGW ++G +G  +      P  V   ++ K   VA G   T 
Sbjct: 288 AGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTL 347

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            ++E+ +V+S+G G S  LGH  I D          TP+++ +L
Sbjct: 348 ALTENKNVFSWGRGTSGQLGHGEIIDRN--------TPKMIDAL 383



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 21/224 (9%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  ++AG  + +AL    S  AV S G G  G+LGHG   D   P L+  F +  +  VV
Sbjct: 22  VALVSAGANHSVALL---SSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV 78

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +       A   +  ++ +WGWG +G LGHGN      P+ ++AL  +K   +A GD   
Sbjct: 79  ICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC 138

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V++ G V+S+G  ++  LG     D         L PQ + + + V  +++       
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDS--------LLPQKIHAFEGVCVKMIAAGAE-- 188

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                HT A+ E G LY +G G  G LG+    ++ +R  PE+V
Sbjct: 189 -----HTAAILEDGDLYGWGWGQYGNLGL---GDRNDRLVPEKV 224



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P    + +G+ +   AAGA  T  I + G +Y +G   +G    G
Sbjct: 154 QNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLG 213

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  P+ V S++   +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 214 DRNDRLV--PEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHL 271

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L++  + QIA G+ + +A+A       +Y  G    G++G     D   P  
Sbjct: 272 VPHKLE-ALKDRFISQIAGGWRHTMAVAGDGK---LYGWGWNKFGQVGVADNVDHCSPV- 326

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q    + Q V   A  W H   + ++  V +WG G  G LGHG     + PK++ AL+
Sbjct: 327 --QVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALS 384



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 6/171 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S++G +++  A G   T+ +S +G +Y +G   +G+  +G     LV  P  +E+
Sbjct: 221 PEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV--PHKLEA 278

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+ F+ Q A G   T  ++ +G++Y + W    ++G     +   P  ++   E   V 
Sbjct: 279 LKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ-KVA 337

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           Q+A G+ + LAL        V+S G G  G+LGHG   D   P++I+   L
Sbjct: 338 QVACGWRHTLALT---ENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALSL 385


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 171/347 (49%), Gaps = 28/347 (8%)

Query: 21   NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
            N R     L G  +  TP  C +L  +R +Q A G      ++  G+++A G  S G   
Sbjct: 1805 NHRGQLGGLEGSRIK-TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLG 1863

Query: 81   YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
             G   +  +  P L+ SL+++FV + A+  G      L+ EG VY +  G D +LGH   
Sbjct: 1864 VGGSDSWAI--PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR 1921

Query: 139  PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
             +   P  L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG   D+ 
Sbjct: 1922 MSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQL 1977

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
             P+L+E   LL  + + +A G+  A    +  D  V +WG G YG LG G  +   +P  
Sbjct: 1978 RPKLVE--ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 2035

Query: 257  VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            +++L  +  + V  G   +  +++ G VY++G G+   LGH ++         +V  P+ 
Sbjct: 2036 IESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKK 2087

Query: 317  VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V +L+   ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 2088 VAALQ--GKKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 2127



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 739  LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 797

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 798  GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 855

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 856  RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 911

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 912  LKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 969

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 970  EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 1021

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 1022 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 1062



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 819  VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 876

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 877  ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALAGRRVVQVACGSRDA 935

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  V +  GA  +  +
Sbjct: 936  QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLAL 992

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 993  TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 1052

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G GN   N   P LV  L  V    V    ++SI W
Sbjct: 1053 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 1096



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 1873 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 1930

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 1931 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 1989

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  V 
Sbjct: 1990 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVK 2046

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 2047 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 2106

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 2107 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 2154

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 2155 ---SAHTLALSTS 2164



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 116  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            LS  G    + WG++ R  LG         P P    L  +  VQ+A G   L A+   P
Sbjct: 1791 LSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPC-EALSLLRPVQLAGGEQSLFAVT--P 1847

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             G  +++ G G GG+LG G       P L+   Q + ++ V V +G  H   +  +G V 
Sbjct: 1848 DG-KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 1906

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
             WG G  G LGHGN      PK+V+ LN +    +A G   +  ++  G V ++G G   
Sbjct: 1907 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 1966

Query: 294  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
             LGH    D         L P+LV +L  +  R + I+  +    +A T  +T+   +++
Sbjct: 1967 RLGHGDSEDQ--------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWS 2013

Query: 354  FGAGDKGQLG 363
            +G GD G+LG
Sbjct: 2014 WGDGDYGKLG 2023



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 793

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
           +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 794 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 840

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVD 380
           +++G G+ G+LG     N+T    P  V+
Sbjct: 841 FSWGEGEDGKLGH---GNRTTLDKPRLVE 866



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G  + G   T +   P LV  L  +FV
Sbjct: 1026 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHG--QQGSGNTFVNKKPALVIGLDAVFV 1083

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 1084 NRVACGS 1090


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH +E +  E   L+G L    +V +A G  + +AL+ Q     V+S G G  G
Sbjct: 61  NTKGQLGHESEGSKPE---LIGALAGQHIVHVACGESHSVALSDQGQ---VFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ ++ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+L+ +L    +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PELIGALAGQHIVHVAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+V+++  G+D +LG  T  + V    L+  L    ++QI+ G  + LA
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA   +    ++ G    G+LG G     +  P+ ++    + L    VAAG  H+  + 
Sbjct: 152 LA---ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL--AQVAAGGAHSFALS 206

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVSQIACGRH-----HTLAFVP 311

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 312 SSGMIYAFGCGTRGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G+ P    +L G  I+  A G   ++ +SD GQV+++G  S G+   G+   + 
Sbjct: 66  LGHESEGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL--GLTTIED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            VT P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 AVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L+ IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VKSLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATGDYTTF-VVSEDGDVYSFGCGESASLG 296
             +A G + T   V   G +Y+FGCG    LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL GI + Q AAG   +  +S +G V+ +GK+S G+   G+   +
Sbjct: 171 LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDER 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L++  VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVSQIACGRHHTLAFV--PSSGMIYAFGCGTRGQLGTGHTCNVKCP 338


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 163/334 (48%), Gaps = 31/334 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  ++ IQ   G      ++  G+V+A G  + G    G+   + V  P L+ES
Sbjct: 1430 PIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGR--LGIGSNESVAIPTLIES 1487

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++ + Q ++  G      LS EG VY++  G D +LGH    +   P  ++ +L    
Sbjct: 1488 IQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPR-IIESLRGDL 1546

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V++A G  +  + A   +G  +Y+ G G  G+LGH    D+  P+L+   +  NL  V 
Sbjct: 1547 IVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGHEDSEDQLKPKLVNALK-DNLV-VD 1601

Query: 216  VAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            VA G   A  +    G  G    W W  G YG LG G  +   VP ++  L      HVA
Sbjct: 1602 VACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVA 1661

Query: 270  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
             G   +  +S+ G VY++G G+   LGH +          +V  P+L+ SL+ +  +VV+
Sbjct: 1662 CGSQFSLALSKAGGVYTWGKGDYYRLGHGS--------DEHVRRPKLIESLRGM--KVVE 1711

Query: 330  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +S+      + H  A  ++G +Y +G  D+GQ+G
Sbjct: 1712 VSVG-----SLHCIAAVDNGDVYTWGDNDEGQIG 1740



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 20/321 (6%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYG 82
            G+  +   E    P    S+Q + I Q +  AG    + +S+ G+VY++G+   G+  +G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1528

Query: 83   VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
             + +  +  P+++ESL+   +V+ A G   +A ++  G +YT+  G   RLGH    + +
Sbjct: 1529 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL 1586

Query: 143  EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----AVYSVGCGLGGKLGHGSRTDEK 198
            +P  L+  L++  VV +A G      L C   G      V+S G G  GKLG G     K
Sbjct: 1587 KPK-LVNALKDNLVVDVACGNGDAQTL-CITEGTGGSSVVWSWGDGDYGKLGRGGSDGCK 1644

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             P +I+   L+      VA G+  +  + + G V TWG G Y  LGHG++E    PK+++
Sbjct: 1645 VPAIIDT--LMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIE 1702

Query: 259  ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            +L  +K + V+ G        ++GDVY++G  +   +G       Q         P+LV 
Sbjct: 1703 SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ--------IPRLVA 1754

Query: 319  SLKQVNERVVQISLTNSIYWN 339
            +L+  +   V     +++ W+
Sbjct: 1755 ALQGHHISHVSCGSAHTVAWS 1775



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 167/351 (47%), Gaps = 35/351 (9%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G + + TP+  + LQ +++ Q   G+     ++  G+VYA G+ + G  
Sbjct: 436 LNDKDQLGGLKGSK-HKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 494

Query: 80  EYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
             G     V     V  PQ ++ L          G      L+ +G VY++  G + +LG
Sbjct: 495 GLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEEGKLG 548

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           H +  + + P  +  T     +  I+ G  +  A+    S   +Y+ G G+ G+LGHG+ 
Sbjct: 549 HGSRADALTPRKI-ETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYGRLGHGNN 604

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECES 252
                P+ ++   L   Q V VA G+  A    + QDG V +WG G +G LG G  +   
Sbjct: 605 HTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCC 662

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           VPK V+ L+    + +  G   +  +S  G V+++G G+   LGH +      ++H  V 
Sbjct: 663 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------DQH--VR 714

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            PQ+V  L++   +VV +++        H  A+TE G+++A+G  D GQ G
Sbjct: 715 RPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 758



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 115  VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 169
             LS  G    F WG++ R G    P   +     P P L  L+ I   Q+  G   L  +
Sbjct: 1399 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1454

Query: 170  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
              +     V++ G G GG+LG GS      P LIE  Q +++  V V AG  H   +  +
Sbjct: 1455 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1511

Query: 230  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
            G V +WG G  G LGHGN      P+++++L     + VATG   +  ++  G +Y++G 
Sbjct: 1512 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1571

Query: 290  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-- 347
            G    LGH    D         L P+LV +LK  +  VV ++  N    +A T  +TE  
Sbjct: 1572 GRYGRLGHEDSEDQ--------LKPKLVNALK--DNLVVDVACGNG---DAQTLCITEGT 1618

Query: 348  --SGKLYAFGAGDKGQLG 363
              S  ++++G GD G+LG
Sbjct: 1619 GGSSVVWSWGDGDYGKLG 1636



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 29  LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  R++   P  C     IR I  + G+  +  I  +G +Y +G   +G   +G   T L
Sbjct: 556 LTPRKIETFPEKC-----IRDI--SCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL 608

Query: 89  VTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
              P+ V++L    VVQ A G  +  T  L+++G VY++  G+  +LG         P P
Sbjct: 609 --KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKP 666

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           +   L    VV+I  G  + LAL+    G+ V++ G G   +LGHGS    + P+++E  
Sbjct: 667 V-ERLSGQDVVKIECGAQFSLALS--RCGL-VWTWGKGDYFRLGHGSDQHVRRPQVVEG- 721

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L   + V VA GA H   V + G+V  WG   +G  G+G       P  VQ L  VK  
Sbjct: 722 -LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKIT 780

Query: 267 HVATG 271
            +A G
Sbjct: 781 KLACG 785



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)

Query: 208  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
            L  L+P+ +  G      V  +G+V   G+G  G LG G+ E  ++P +++++  V    
Sbjct: 1436 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1495

Query: 268  VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
            V+   G      +S +G+VYS+G G    LGH       GNR +++  P+++ SL+   +
Sbjct: 1496 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1545

Query: 326  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             +V+++   S     H+ A+  +G LY +G G  G+LG E   +Q
Sbjct: 1546 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1585



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           GL  K   G     KH   +    L  L+   V  G+     V   G+V   G    G L
Sbjct: 435 GLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 494

Query: 244 GHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           G G     SV ++ Q L    +K + V +G      ++ DG VYS+G GE   LGH + A
Sbjct: 495 GLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRA 553

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           D         LTP+ + +  +   R +          ++H+ A+  SG LY +G G  G+
Sbjct: 554 DA--------LTPRKIETFPEKCIRDISCG-------SSHSAAIGSSGTLYTWGHGMYGR 598

Query: 362 LG 363
           LG
Sbjct: 599 LG 600


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 163/334 (48%), Gaps = 31/334 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+ C SL  ++ IQ   G      ++  G+V+A G  + G    G+   + V  P L+ES
Sbjct: 1431 PIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGR--LGIGSNESVAIPTLIES 1488

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            ++++ + Q ++  G      LS EG VY++  G D +LGH    +   P  ++ +L    
Sbjct: 1489 IQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPR-IIESLRGDL 1547

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            +V++A G  +  + A   +G  +Y+ G G  G+LGH    D+  P+L+   +  NL  V 
Sbjct: 1548 IVKVATGGSH--SAAINATG-GLYTWGKGRYGRLGHEDSEDQLKPKLVNALK-DNLV-VD 1602

Query: 216  VAAGAWHAAVV----GQDGRVCTWGW--GRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            VA G   A  +    G  G    W W  G YG LG G  +   VP ++  L      HVA
Sbjct: 1603 VACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVA 1662

Query: 270  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
             G   +  +S+ G VY++G G+   LGH +          +V  P+L+ SL+ +  +VV+
Sbjct: 1663 CGSQFSLALSKAGGVYTWGKGDYYRLGHGS--------DEHVRRPKLIESLRGM--KVVE 1712

Query: 330  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +S+      + H  A  ++G +Y +G  D+GQ+G
Sbjct: 1713 VSVG-----SLHCIAAVDNGDVYTWGDNDEGQIG 1741



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 20/321 (6%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYG 82
            G+  +   E    P    S+Q + I Q +  AG    + +S+ G+VY++G+   G+  +G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1529

Query: 83   VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
             + +  +  P+++ESL+   +V+ A G   +A ++  G +YT+  G   RLGH    + +
Sbjct: 1530 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL 1587

Query: 143  EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----AVYSVGCGLGGKLGHGSRTDEK 198
            +P  L+  L++  VV +A G      L C   G      V+S G G  GKLG G     K
Sbjct: 1588 KPK-LVNALKDNLVVDVACGNGDAQTL-CITEGTGGSSVVWSWGDGDYGKLGRGGSDGCK 1645

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             P +I+   L+      VA G+  +  + + G V TWG G Y  LGHG++E    PK+++
Sbjct: 1646 VPAIIDT--LMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIE 1703

Query: 259  ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            +L  +K + V+ G        ++GDVY++G  +   +G       Q         P+LV 
Sbjct: 1704 SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ--------IPRLVA 1755

Query: 319  SLKQVNERVVQISLTNSIYWN 339
            +L+  +   V     +++ W+
Sbjct: 1756 ALQGHHISHVSCGSAHTVAWS 1776



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 167/351 (47%), Gaps = 35/351 (9%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G + + TP+  + LQ +++ Q   G+     ++  G+VYA G+ + G  
Sbjct: 437 LNDKDQLGGLKGSK-HKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 495

Query: 80  EYG-----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
             G     V     V  PQ ++ L          G      L+ +G VY++  G + +LG
Sbjct: 496 GLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEEGKLG 549

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           H +  + + P  +  T     +  I+ G  +  A+    S   +Y+ G G+ G+LGHG+ 
Sbjct: 550 HGSRADALTPRKI-ETFPEKCIRDISCGSSHSAAIG---SSGTLYTWGHGMYGRLGHGNN 605

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECES 252
                P+ ++   L   Q V VA G+  A    + QDG V +WG G +G LG G  +   
Sbjct: 606 HTLLKPKPVQ--ALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCC 663

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           VPK V+ L+    + +  G   +  +S  G V+++G G+   LGH +      ++H  V 
Sbjct: 664 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGS------DQH--VR 715

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            PQ+V  L++   +VV +++        H  A+TE G+++A+G  D GQ G
Sbjct: 716 RPQVVEGLRE--HKVVDVAVG-----ALHCLAVTEGGQVFAWGDNDHGQQG 759



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 115  VLSREGRVYTFSWGNDARLGHHTEPNDVE-----PHPLLGTLENIPVVQIAAGYCYLLAL 169
             LS  G    F WG++ R G    P   +     P P L  L+ I   Q+  G   L  +
Sbjct: 1400 TLSWVGSGSIFGWGHNHR-GQLGGPEGAKVKIPIPCPSLAALKPI---QLVGGEQTLFTV 1455

Query: 170  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
              +     V++ G G GG+LG GS      P LIE  Q +++  V V AG  H   +  +
Sbjct: 1456 TGEGK---VFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE 1512

Query: 230  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
            G V +WG G  G LGHGN      P+++++L     + VATG   +  ++  G +Y++G 
Sbjct: 1513 GEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGK 1572

Query: 290  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-- 347
            G    LGH    D         L P+LV +LK  +  VV ++  N    +A T  +TE  
Sbjct: 1573 GRYGRLGHEDSEDQ--------LKPKLVNALK--DNLVVDVACGNG---DAQTLCITEGT 1619

Query: 348  --SGKLYAFGAGDKGQLG 363
              S  ++++G GD G+LG
Sbjct: 1620 GGSSVVWSWGDGDYGKLG 1637



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 29  LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  R++   P  C     IR I  + G+  +  I  +G +Y +G   +G   +G   T L
Sbjct: 557 LTPRKIETFPEKC-----IRDI--SCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLL 609

Query: 89  VTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
              P+ V++L    VVQ A G  +  T  L+++G VY++  G+  +LG         P P
Sbjct: 610 --KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKP 667

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           +   L    VV+I  G  + LAL+    G+ V++ G G   +LGHGS    + P+++E  
Sbjct: 668 V-ERLSGQDVVKIECGAQFSLALS--RCGL-VWTWGKGDYFRLGHGSDQHVRRPQVVEG- 722

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L   + V VA GA H   V + G+V  WG   +G  G+G       P  VQ L  VK  
Sbjct: 723 -LREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKIT 781

Query: 267 HVATG 271
            +A G
Sbjct: 782 KLACG 786



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 17/165 (10%)

Query: 208  LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
            L  L+P+ +  G      V  +G+V   G+G  G LG G+ E  ++P +++++  V    
Sbjct: 1437 LAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1496

Query: 268  VAT--GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
            V+   G      +S +G+VYS+G G    LGH       GNR +++  P+++ SL+   +
Sbjct: 1497 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGH-------GNR-SSLDHPRIIESLR--GD 1546

Query: 326  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             +V+++   S     H+ A+  +G LY +G G  G+LG E   +Q
Sbjct: 1547 LIVKVATGGS-----HSAAINATGGLYTWGKGRYGRLGHEDSEDQ 1586



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           GL  K   G     KH   +    L  L+   V  G+     V   G+V   G    G L
Sbjct: 436 GLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGESTSGRL 495

Query: 244 GHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           G G     SV ++ Q L    +K + V +G      ++ DG VYS+G GE   LGH + A
Sbjct: 496 GLG-PVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRA 554

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           D         LTP+ + +  +   R +          ++H+ A+  SG LY +G G  G+
Sbjct: 555 DA--------LTPRKIETFPEKCIRDISCG-------SSHSAAIGSSGTLYTWGHGMYGR 599

Query: 362 LG 363
           LG
Sbjct: 600 LG 601


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 48/349 (13%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLVTSPQLV 95
           +P     L    II+  A    +M +S  G+VY +GK+  G    Y +    ++  P+LV
Sbjct: 66  SPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMI-QPELV 124

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE--PNDVEPH------ 145
           E L+NI + Q + G F  A +S++G +YT  WGN    +LGH  +   N VE        
Sbjct: 125 EKLENIQIKQISCGPFHMAAISQDGELYT--WGNKDHGKLGHEIQQKSNKVEIKRGNQNY 182

Query: 146 -----PLLGT----LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-T 195
                 +L T    L  I   Q++ G  + + L        VYS G  + G+LG+ S  T
Sbjct: 183 DYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT---ENGEVYSFGNSMKGQLGYQSEET 239

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P+ I   Q +    + +  G   +A V   G+V TWG   +G LG+     ++ P 
Sbjct: 240 GNFQPKKIPDLQNI----INIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPN 295

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            V      K I+++ GD     +S +G ++++G G    LGH+       NR+ ++  P+
Sbjct: 296 QVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHS-------NRN-DLYAPK 347

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +    +  E+++++    +     HT  LT++ +LY FG G++GQLGI
Sbjct: 348 QI----EFKEKIIKVDCGGT-----HTAFLTQNNQLYLFGRGNEGQLGI 387



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 46/270 (17%)

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           VY + +GN  +LG   E N   P  +   L +  ++++ A     +AL+       VY+ 
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVE-KLSDRNIIKVKANKSVSMALS---QDGKVYTW 100

Query: 182 GCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           G   GG LGH   T  +   P L+E  +L N+Q   ++ G +H A + QDG + TWG   
Sbjct: 101 GKNKGGILGHYDITSFNMIQPELVE--KLENIQIKQISCGPFHMAAISQDGELYTWGNKD 158

Query: 240 YGCLGH-------------GNE-----ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           +G LGH             GN+     E   +P  VQ+LN +K   V+ G   T V++E+
Sbjct: 159 HGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN 218

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G+VYSFG      LG+ +   G          P+ +  L    + ++ I           
Sbjct: 219 GEVYSFGNSMKGQLGYQSEETGN-------FQPKKIPDL----QNIINIDCGQQF----- 262

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           + A++ SGK+Y +G  D GQLG    NNQ+
Sbjct: 263 SAAVSSSGKVYTWGNNDHGQLG----NNQS 288



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 20/272 (7%)

Query: 16  RPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 75
           + + +  + G +N    E +  P   +SL GI+  Q + G   T+++++ G+VY+FG   
Sbjct: 169 KSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSM 228

Query: 76  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARL 133
            G+  Y  + T     P+ +  L+NI  +    G  F+A +S  G+VYT  WGN+   +L
Sbjct: 229 KGQLGYQSEETGNF-QPKKIPDLQNIINIDC--GQQFSAAVSSSGKVYT--WGNNDHGQL 283

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           G++       P+ + G   N  ++ I+ G  ++ AL+ +     +++ G G  G+LGH +
Sbjct: 284 GNNQSIYQARPNQVTGFGGN-KIINISCGDNFIAALSNEGK---LFTWGYGNDGQLGHSN 339

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECE- 251
           R D   P+ IE       + + V  G  H A + Q+ ++  +G G  G LG G N E E 
Sbjct: 340 RNDLYAPKQIE----FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEA 395

Query: 252 ---SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
              + PK+V+    +K + V  G   T  ++E
Sbjct: 396 AIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 23/233 (9%)

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           + +G+         P    VY+ G G  G+LG  +  ++  P+ +E+    N+  + V A
Sbjct: 26  VTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNI--IKVKA 83

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTF 276
               +  + QDG+V TWG  + G LGH +    ++  P++V+ L +++   ++ G +   
Sbjct: 84  NKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMA 143

Query: 277 VVSEDGDVYSFGCGESASLGH------NAIADGQGNRHANV----LTPQLVTSLKQVNER 326
            +S+DG++Y++G  +   LGH      N +   +GN++ +     + P  V SL  +  +
Sbjct: 144 AISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGI--K 201

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             Q+S          T  LTE+G++Y+FG   KGQLG +  + +T    P+++
Sbjct: 202 CKQVSCGGQF-----TVVLTENGEVYSFGNSMKGQLGYQ--SEETGNFQPKKI 247


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+Y   L  ++ I  A G+    ++S  G++YA G+ + G  
Sbjct: 2596 LNDKDQLGGLKGSKIK-LPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGR- 2653

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V  P+ +  L    + + A+  G      L+++G+V+++  G D +LGH  
Sbjct: 2654 -LGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN 2712

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              +  +P  L+  L++  +  IA G  +  A+A   S   +Y+ G G  G+LGHG    +
Sbjct: 2713 CISLDKPK-LIEILKSKRIRDIACGSGHSAAIA---SNGELYTWGLGEYGRLGHGDTITQ 2768

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L++   L+  + V VA G+  A  +    DG V +WG G +G LG G  +    P 
Sbjct: 2769 TRPKLVQA--LVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPL 2826

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             V  LN +  I V  G   +  +++ G+V+++G G+   LGH       GN H +V  P 
Sbjct: 2827 AVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH-------GNDH-HVRKPT 2878

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LV  L+   ++++ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 2879 LVEGLR--GKKIIHVAVGA-----LHCLAVTDTGQVYAWGDNDHGQQG 2919



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 29/326 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP YC  + G+ I Q        M++S  G  Y     S  E +Y ++       P    
Sbjct: 93  TPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMYHGS--ETQYPLRVHGFSDKPI--- 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
                 +   A G  + A L+++G VY++  G+  RLGH    +  EP  L+ +L +  +
Sbjct: 148 ----TMIASHADGKHYLA-LTQDGCVYSWGNGDGGRLGHGDTVSYDEPK-LIESLLDKNI 201

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G  Y  AL+   SG  +Y+ G G  G+LGHG+  D   P L+   +   +  V  
Sbjct: 202 VFIACGSTYSAALSA--SG-ELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVAC 258

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            +G      V   G V +WG G YG LG G  +    PK+V  L D+  + V  G   + 
Sbjct: 259 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSA 318

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G+VY++G G++  LGH +          +V  P+++ SL+  ++++  +S+  + 
Sbjct: 319 ALTAHGEVYTWGKGDAYRLGHGS--------EEHVRYPKVIESLR--DKKIKDLSVGTT- 367

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQL 362
               H  ALTE   +Y +G  D GQ+
Sbjct: 368 ----HILALTEDQFVYGWGRNDYGQI 389



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I+ +   +G    + ++  G+V+++G+   G+  +G      +  P+L+E LK+  +   
Sbjct: 2676 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHG--NCISLDKPKLIEILKSKRIRDI 2733

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A ++  G +YT+  G   RLGH        P  L+  L    VVQ+A G    
Sbjct: 2734 ACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPK-LVQALVGQRVVQVACGSRDA 2792

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              +A    G  VYS G G  GKLG G       P  +++   L +  + V  GA  +  +
Sbjct: 2793 QTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGV--IQVECGAQFSLAL 2849

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHGN+     P +V+ L   K IHVA G      V++ G VY+
Sbjct: 2850 TKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYA 2909

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +    G+ A +    NR      P LV  L+      V    ++SI W
Sbjct: 2910 WGDNDHGQQGNGATS---VNRK-----PSLVHDLEDARVNRVSCGSSHSIAW 2953



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 43/300 (14%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +V A+G   FG            ++P   + +  + + Q         +LS  G  Y   
Sbjct: 79  EVLAWGGVKFGNG----------STPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMY 128

Query: 127 WGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
            G++ +            +PL +    + P+  IA+       LA    G  VYS G G 
Sbjct: 129 HGSETQ------------YPLRVHGFSDKPITMIASHADGKHYLALTQDG-CVYSWGNGD 175

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           GG+LGHG       P+LIE   LL+   V +A G+ ++A +   G + TWG G YG LGH
Sbjct: 176 GGRLGHGDTVSYDEPKLIES--LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGH 233

Query: 246 GNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GN +    P +V  L     +HVA  +GD  T  V+  G V+S+G G+   LG     DG
Sbjct: 234 GNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG-TDG 292

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                    TP++V  L  +N  VV++           + ALT  G++Y +G GD  +LG
Sbjct: 293 SK-------TPKIVDKLLDIN--VVKVFCGGQF-----SAALTAHGEVYTWGKGDAYRLG 338



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 10/241 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL    I+  A G+  +  +S +G++Y +G+ ++G   +G      V +P LV +
Sbjct: 190 PKLIESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHG--NFDDVLTPTLVTT 247

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP 155
           LK   VV  A G+  +  L        FSWG+    +LG         P  ++  L +I 
Sbjct: 248 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK-IVDKLLDIN 306

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV++  G  +  AL        VY+ G G   +LGHGS    ++P++IE  +   ++ + 
Sbjct: 307 VVKVFCGGQFSAALTAHGE---VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLS 363

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V  G  H   + +D  V  WG   YG +        S P +   L+    I +A+G   +
Sbjct: 364 V--GTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQS 421

Query: 276 F 276
           F
Sbjct: 422 F 422



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 116/281 (41%), Gaps = 39/281 (13%)

Query: 83   VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +Q  K++ +PQ  +S     V+   +G+ FT ++  E R  +  +            +D 
Sbjct: 2468 IQSLKIIVNPQ--DSSYMPCVIAVNVGDSFTNLV--EFRTISIRY------------SDT 2511

Query: 143  EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
                L    E  P V+IA   C    + C+  G+ +      +G +    ++       L
Sbjct: 2512 SVTLLQDIKEYYPCVEIAIKQCRNGGIDCKIHGLRI------IGRQNMFENQLTTSVSFL 2565

Query: 203  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
               +++L  Q  +  +         Q   V  WG      LG        +P   + L+ 
Sbjct: 2566 ASDWEVLQEQVAIQRS----TDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSK 2621

Query: 263  VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            +K IH+A G  T F+VS++G +Y+ G G +  LG      G  N   NV  P+ +  L Q
Sbjct: 2622 LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGL-----GDDN---NVCEPKAIPFLSQ 2673

Query: 323  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               + V +          H  ALT+ GK++++G G+ G+LG
Sbjct: 2674 FVIKKVAVHSGGK-----HALALTQDGKVFSWGEGEDGKLG 2709



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL    L G+ +IQ   GA  ++ ++  G+V+ +GK  +    +G      V  P LVE
Sbjct: 2824 TPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG--NDHHVRKPTLVE 2881

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
             L+   ++  A+G      ++  G+VY  +WG++           V   P L+  LE+  
Sbjct: 2882 GLRGKKIIHVAVGALHCLAVTDTGQVY--AWGDNDHGQQGNGATSVNRKPSLVHDLEDAR 2939

Query: 156  VVQIAAGYCYLLA--LACQPS 174
            V +++ G  + +A  L  QPS
Sbjct: 2940 VNRVSCGSSHSIAWVLVDQPS 2960


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 165/331 (49%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4169 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4226

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4227 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4285

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    S   V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4286 SVADIACGSAHSAAIT---SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4340

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4341 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4400

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4401 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4449

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4450 TGSL----HCVACSDAGEVYTWGDNDEGQLG 4476



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  + G+    ++S  G+V+A G+ + G  
Sbjct: 3034 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGTNGRL 3092

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3093 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3150

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 3151 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 3206

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+ +    L   + + VA G+  A  +   +DG V +WG G +G LG G  E  + P 
Sbjct: 3207 LKPKQVTA--LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPH 3264

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3265 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3316

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3317 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3357



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 3114 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 3171

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  +   L    V+Q+A G    
Sbjct: 3172 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDA 3230

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 3231 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLAL 3287

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3288 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3347

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++SI W     +L 
Sbjct: 3348 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAWGLPNASLD 3399

Query: 347  ESGK 350
            E  +
Sbjct: 3400 EEKR 3403



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4222 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4279

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4280 EHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4338

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4339 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 4395

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4396 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4455

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4456 VACSDAGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4503

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4504 ---SAHTLALSTS 4513



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 26/286 (9%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           Y  +  K    PQ +E L    ++  A    G  F A+ S     Y++  G D RLGH  
Sbjct: 593 YNCRLGKPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRN-AYSWGAGEDHRLGHGD 651

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 P  +      +  V     Y    + A   SG  +Y+ G G  G+LGHG+  D+
Sbjct: 652 THARAVPTKISALDRCVKAVFCGCSY----SAAITWSG-NLYTWGRGTYGRLGHGNSDDQ 706

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             P ++       +  V + +G  H+  +  +G V  WG G YG LG+GN      P +V
Sbjct: 707 CVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV 766

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQL 316
           + L  V+ I    G  ++  ++ +G +YS+  G+++ LGH  +    QG        P+L
Sbjct: 767 ETLPRVQRIFA--GAQSSMALTTEGHLYSW--GKASCLGHQQVERSVQGCS-----VPRL 817

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           V+SL+  ++R+V +++       AH  ALT  G+++ +G  D  Q+
Sbjct: 818 VSSLQ--HKRLVDVAVG-----VAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 110/250 (44%), Gaps = 10/250 (4%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    +L+  +I   A G+  +  IS  G++Y +G   +G   +G 
Sbjct: 3143 DGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD 3202

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              T+L   P+ V +L    V+Q A G  +  T  L+ +G V+++  G+  +LG       
Sbjct: 3203 NATQL--KPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS 3260

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              PH  +  L  I V+QI  G  + LAL        V++ G G   +LGHG     + P+
Sbjct: 3261 ATPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVWTWGKGDYYRLGHGGDQHVRKPQ 3316

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             I   +    + + VA GA H   V   G+V  WG   +G  G GN      P +V  L+
Sbjct: 3317 PIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLD 3374

Query: 262  DVKAIHVATG 271
             V    VA G
Sbjct: 3375 AVFVNRVACG 3384



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 116  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            LS  G    + WG++ R  LG         P P    L  +  VQ+A G   L A+   P
Sbjct: 4140 LSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPC-EALSLLRPVQLAGGEQSLFAVT--P 4196

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             G  +++ G G GG+LG G       P L+   Q + ++ V V +G  H   +  +G V 
Sbjct: 4197 DG-KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4255

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
             WG G  G LGHGN      PK+V+ LN +    +A G   +  ++  G V ++G G   
Sbjct: 4256 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYG 4315

Query: 294  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
             LGH    D         L P+LV +L  +  R + I+  +    +A T  +T+   +++
Sbjct: 4316 RLGHGDSEDQ--------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWS 4362

Query: 354  FGAGDKGQLG 363
            +G GD G+LG
Sbjct: 4363 WGDGDYGKLG 4372



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 14/198 (7%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G  ++A ++  G +YT+  G   RLGH    +   P  ++  L    ++ +A G     +
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP-AIVMALAEYEIIDVALGSGDAHS 732

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L     G+ VY+ G G  GKLG+G+      P L+E    +      + AGA  +  +  
Sbjct: 733 LCLTSEGL-VYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ----RIFAGAQSSMALTT 787

Query: 229 DGRVCTWGWGRYGCLGHGNEE-----CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           +G +  + WG+  CLGH   E     C SVP++V +L   + + VA G      ++  G+
Sbjct: 788 EGHL--YSWGKASCLGHQQVERSVQGC-SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGE 844

Query: 284 VYSFGCGESASLGHNAIA 301
           V+ +G  +S  +  ++++
Sbjct: 845 VFGWGRNDSQQICPSSVS 862



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 39/255 (15%)

Query: 121 RVYTFSWGNDAR--LGHHTEPNDVEP-----HPLLGTLENIPVV----QIAAGYCYLLAL 169
           RVY   W + ++   G   EP+ V P      PLL  + ++P++    Q+    C    L
Sbjct: 526 RVYALGWPSLSKEQPGFSAEPSTVTPSWSSQDPLL--VGSLPLLNCRFQVKQIACSESLL 583

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
                   +Y+  C LG          E  P+ IE+     +  +       H   +  +
Sbjct: 584 LLLSQDGKLYN--CRLG--------KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSN 633

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 288
               +WG G    LGHG+    +VP  + AL+  VKA+    G   +  ++  G++Y++G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDRCVKAVFC--GCSYSAAITWSGNLYTWG 691

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G    LGH       GN     + P +V +L +    ++ ++L +    +AH+  LT  
Sbjct: 692 RGTYGRLGH-------GNSDDQCV-PAIVMALAEYE--IIDVALGSG---DAHSLCLTSE 738

Query: 349 GKLYAFGAGDKGQLG 363
           G +YA+G GD G+LG
Sbjct: 739 GLVYAWGDGDYGKLG 753



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH++ G  + F+VS+DG V++ G G 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3089 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVH-----SGGKHALALTLDGKV 3135

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3136 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3161


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 20/307 (6%)

Query: 38   PLYCRSLQG---IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            P    + QG    +++ +    G +M +++ G+V+++G   FG+  +G    +    P+ 
Sbjct: 3754 PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQ 3811

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +E+L+   VVQ A G   +AV++ +G+++TF  G   RLG  +  N ++P   +  LE  
Sbjct: 3812 IEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPE-RVAALEGY 3870

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V Q++ G  + L L+    GMAV++ G G  GKLG GS T + +P+ +EQ  L N    
Sbjct: 3871 HVGQVSCGLNHTLVLSLD--GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMK 3926

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             V  GA  + V+  DG V T+G  R   L     +  S P+VV +L  +    +A G   
Sbjct: 3927 KVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEH 3986

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLT 333
               +S  GD+Y++GC     LG           H N++  P L+T+L+  N + +     
Sbjct: 3987 VLALSSTGDIYAWGCNSEGQLGLG---------HCNLVKEPTLITALQGKNIKQISAGRC 4037

Query: 334  NSIYWNA 340
            +S  W A
Sbjct: 4038 HSSAWTA 4044



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 22/296 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQA 106
           ++  +    G T+ I+  G+V+++G   +G+  +G   T+    P++V+  L +  VV A
Sbjct: 425 KVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIVQGPLFSKIVVSA 482

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGYCY 165
           + G   +A ++ +G +YT+  G+  RLGH    +D +       +++I  V Q+A G  +
Sbjct: 483 SAGYRHSAAVTNDGELYTWGEGDFGRLGH----SDSQSRNTPTLVKDISGVGQVACGSSH 538

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            +A+A    G  ++S G G  GKLGHG       P++IE      ++   V AG+  +  
Sbjct: 539 TIAVA--QDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRK--VCAGSQSSLA 594

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           +   G+V  WG G   CLG G+ E  S+ P+ V+ L+  K I ++ GD     +S + +V
Sbjct: 595 LTSAGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEV 652

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           Y++G   + ++G      GQG+    +  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 653 YAWG---NNTMGQC----GQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 701



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T  +S  G V A GK S+G    G    + +    ++E  +NI  V ++ G +  
Sbjct: 376 AGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGH 435

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T  ++ +G V+++  G   +LGH        P  + G L +  VV  +AGY +  A+   
Sbjct: 436 TLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT-- 493

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
            +   +Y+ G G  G+LGH        P L++    +      VA G+ H   V QDGR 
Sbjct: 494 -NDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDGRT 548

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           + ++G G  G LGHG+      PKV++AL+      V  G  ++  ++  G V+++GCG 
Sbjct: 549 MWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS 608

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
                      G G+     L P+ V  L     +++ IS  +S     H  AL+   ++
Sbjct: 609 CL---------GCGSSETTSLRPRFVEDLSIT--KIIDISCGDS-----HCLALSHENEV 652

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 653 YAWGNNTMGQCG 664



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 177  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 235
            AV +VG G  G+LG G+  D   P +I  FQ   +  +V + G+  H+  + + G V +W
Sbjct: 3731 AVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSW 3790

Query: 236  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
            G G +G LGHGN E +  PK ++AL     + +A G   + VV+ DG +++FG GES  L
Sbjct: 3791 GDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRL 3850

Query: 296  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAF 354
            G  +         +N + P+ V +L+  +   V   L        HT  L+  G  ++AF
Sbjct: 3851 GQRST--------SNKMQPERVAALEGYHVGQVSCGLN-------HTLVLSLDGMAVWAF 3895

Query: 355  GAGDKGQLGIELVNNQTERGNPERVD 380
            G GD G+LG     + T +  P++V+
Sbjct: 3896 GDGDYGKLG---AGSSTAKYYPQKVE 3918



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 27/225 (12%)

Query: 149 GTLENIPVVQIAAGYCYLLAL-ACQPSGMAVYSVG----CGLG--GKLGHGSRTDEKHPR 201
           GTLE I + ++  G+     + A Q    +V + G    CG G  G+LG G   ++  P+
Sbjct: 354 GTLEKILLPKLTQGFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPK 413

Query: 202 LIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            +      N++ V  + G+  H   +  DG V +WG G YG LGHGN   +  PK+VQ  
Sbjct: 414 KLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGP 473

Query: 261 NDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
              K +  A+  Y  +  V+ DG++Y++G G+   LGH   +D Q        TP LV  
Sbjct: 474 LFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH---SDSQSRN-----TPTLVKD 525

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQLG 363
           +  V     Q++  +S     HT A+ + G+ +++FG GD G+LG
Sbjct: 526 ISGVG----QVACGSS-----HTIAVAQDGRTMWSFGGGDNGKLG 561



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 27/318 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   + LI   G V A G+  +G    G      V  P ++ + +   V Q     
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFV--PTIISAFQGYVVTQLVTSC 3772

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ+A G+ +  
Sbjct: 3773 GSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHSA 3831

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    +   +++ G G  G+LG  S +++  P  +   +  ++  V  + G  H  V+ 
Sbjct: 3832 VVT---ADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQV--SCGLNHTLVLS 3886

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG G+   +  P+ V+ L +     V  G   + V++ DG VY+
Sbjct: 3887 LDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYT 3946

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            FG  +   +G   + D      +N   PQ+V SL+ +    + +          H  AL+
Sbjct: 3947 FG--QERLIG---LPDSMLKNRSN---PQVVPSLEGLFIEDIAVGC-------EHVLALS 3991

Query: 347  ESGKLYAFGAGDKGQLGI 364
             +G +YA+G   +GQLG+
Sbjct: 3992 STGDIYAWGCNSEGQLGL 4009



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 97/250 (38%), Gaps = 58/250 (23%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q A G   + +++  G+++ FG                         
Sbjct: 3809 PKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALE 3868

Query: 75   -------------------------SFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQA 106
                                     +FG+ +YG  G    T+   PQ VE L N  + + 
Sbjct: 3869 GYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKV 3928

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
              G  F+ VL+ +G VYTF       L      N   P  ++ +LE + +  IA G  ++
Sbjct: 3929 CCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQ-VVPSLEGLFIEDIAVGCEHV 3987

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA---AGAWHA 223
            LAL+   S   +Y+ GC   G+LG G     K P LI   Q  N++ +      + AW A
Sbjct: 3988 LALS---STGDIYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQISAGRCHSSAWTA 4044

Query: 224  AVVGQDGRVC 233
                ++  +C
Sbjct: 4045 PSTSKNSALC 4054



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCT---WGWGRYGCLGHGNEECESVPKVVQALNDV 263
           ++ NL    + + +   A  G DG   T   WG      L  G  E   +PK+ Q  +D 
Sbjct: 312 EICNLASYCLCSSSADTACPGTDGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDA 371

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           + I    G Y TF VS DG V + G G    LG   + D         L  +   ++K+V
Sbjct: 372 QTIEA--GQYCTFSVSTDGSVKACGKGSYGRLG---LGDSNNQSMPKKLVLEPHRNIKKV 426

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     +S   + HT A+T  G+++++G G+ G+LG
Sbjct: 427 ---------FSSKGSDGHTLAITVDGEVFSWGDGEYGKLG 457



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 15/143 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLV 95
           P    +L G  I +  AG+  ++ ++ AGQV+A+G  S      G  G+   TS  P+ V
Sbjct: 571 PKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRFV 625

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTL 151
           E L    ++  + G+     LS E  VY  +WGN+  +G     HT      P  +LG L
Sbjct: 626 EDLSITKIIDISCGDSHCLALSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-L 681

Query: 152 ENIPVVQIAAGYCYLLALACQPS 174
           E + + QI AG  + LA    P+
Sbjct: 682 EGVSIQQITAGTSHSLAWTAVPT 704


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 37/352 (10%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESL 98
           ++LQ  RI    AG+  ++ I+D G+++ +G   + + G         K   +P  V++L
Sbjct: 33  KALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKAL 92

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE------ 152
            ++ +VQAAIG +    +  +GR Y +      + G   E  D    PL   +E      
Sbjct: 93  SSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCA 152

Query: 153 -NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
             + V Q+AAG  + + L  +     V++     G     G       P  ++  + + L
Sbjct: 153 PKLVVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDIKQISVPVRVQGLENVRL 205

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+D+  + +A G
Sbjct: 206 ----IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAG 261

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
            + +  ++++G+VY +G GE   LG         +  ++ + PQ V  L    E +VQ+S
Sbjct: 262 GWHSTALTDEGEVYGWGRGEHGRLGFGD------SDKSSKMVPQKVQLL--AGEDIVQVS 313

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
              +     H+ ALT  G +++FG GD G+LG      +   G P  V IDL
Sbjct: 314 CGGT-----HSVALTRDGHMFSFGRGDHGRLGY---GRKVTTGQPMEVPIDL 357



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 32/275 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG---EAEYGVQGT-----KL 88
           TP   ++L  ++I+QAA G    + + D G+ YA+G + +G   E      GT     + 
Sbjct: 85  TPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRD 144

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----P 144
           +  PQ       + V Q A G   + VL+REG V+T+        G    P D++    P
Sbjct: 145 IEIPQ--RCAPKLVVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVP 194

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             + G LEN+ ++ + A       LA Q  G  +++ G    G+LG G       P  ++
Sbjct: 195 VRVQG-LENVRLIAVGA----FHNLALQEDG-TLWAWGNNEYGQLGTGDTQPRSQPIRVQ 248

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALND 262
               L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  VP+ VQ L  
Sbjct: 249 GLSDLTL--VDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAG 306

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
              + V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 307 EDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGY 341



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 49/246 (19%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           + + G G  G+LG GS  +++   L++  Q   ++ VV  AG+ ++  +  DG++ TWGW
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVV--AGSRNSLAIADDGKLFTWGW 64

Query: 238 GRYGCLGHGNE-----ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            +   LGH  E     + E+ P  V+AL+ VK +  A G +    V + G  Y++G  E 
Sbjct: 65  NQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 124

Query: 293 ASLGHNA-IADGQGN-------------------------RHANVLT----------PQL 316
              G      DG G                           H+ VLT          P  
Sbjct: 125 GQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 184

Query: 317 VTSLKQVNERVVQISLTNS--IYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
              +KQ++  V    L N   I   A H  AL E G L+A+G  + GQLG     +   R
Sbjct: 185 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLG---TGDTQPR 241

Query: 374 GNPERV 379
             P RV
Sbjct: 242 SQPIRV 247



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 11/152 (7%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +  WG G  G LG G+ E +    +V+AL   +   V  G   +  +++DG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A+LGH A    + N+  N  TP  V +L  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RATLGHPAETKSE-NKTEN--TPSQVKALSSV--KIVQAAIGG---W--HCLAVDDQGRA 116

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YA+G  + GQ G E    +   G P R DI++
Sbjct: 117 YAWGGNEYGQCG-EEPERKDGTGRPLRRDIEI 147


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 41/347 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS-----FGEAEYGVQGTKLVTSP 92
           P     L G RIIQ  +G   ++ +S  G VY++G+        G+   G      V  P
Sbjct: 25  PTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKP 84

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            L++SL++  +++ A GNF +  L+  G+VY   WG   RL       D++    L  + 
Sbjct: 85  TLIKSLQHERIIKVACGNFHSLALTDMGKVY--EWGQLHRLDESQSSLDIQSTNGLIEMP 142

Query: 153 NIPVVQIAAGYCYLLALACQPSG-MAVYSVGCGLGGK-------LGHGSRTDEKHP-RLI 203
            +   +I        +++   SG    Y    G   K         + +++  KH  ++I
Sbjct: 143 RLSSQRIIEA-----SVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKII 197

Query: 204 EQFQLLNLQ------PVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           +  Q + +Q       VV  +G W  +A V + GR+ TWG+   G LG GN    S P++
Sbjct: 198 DLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQL 257

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V+ L DV  + V  G      +++ G+VYS+G G    LGH  +         + L P+ 
Sbjct: 258 VKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNV--------KSYLHPKK 309

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +    ++NER+ Q++  ++      T   +  G LYAFG G+ GQLG
Sbjct: 310 IQQFVELNERIAQVACGSNF-----TMVRSVQGLLYAFGHGEYGQLG 351



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 36/236 (15%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVV 157
           VV  + G  F+A +++ GR+YT+ +    +LG      H+ P       L+ TL ++ +V
Sbjct: 214 VVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQ------LVKTLIDVNIV 267

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +  G  ++ A+  Q     VYS G G+ G+LGHG+     HP+ I+QF  LN +   VA
Sbjct: 268 SVVCGRQHICAITDQGE---VYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVA 324

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------------SVPKVVQALNDVK 264
            G+    V    G +  +G G YG LG   EE +             S+P VV++L   K
Sbjct: 325 CGSNFTMVRSVQGLLYAFGHGEYGQLG-STEETQHLDFGGRDNHFKYSIPIVVKSLETKK 383

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
             +VA G   T VV+++ +VY +G G S +L       G GN+    L PQL+TSL
Sbjct: 384 IKNVACGHLHTIVVTDENEVYQWGWGSSGAL-------GLGNKRFQ-LVPQLITSL 431



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 54/357 (15%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTK-LVTSPQ 93
           P   +SLQ  RII+ A G   ++ ++D G+VY +G   +    ++   +Q T  L+  P+
Sbjct: 84  PTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPR 143

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR------------------LGH 135
           L        +++A++  +    LS E + Y  + G   +                  LG 
Sbjct: 144 LSSQR----IIEASVSQY----LSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGK 195

Query: 136 HTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
             + N   P  +    ++IP  VV ++ G+ +  + A   SG  +Y+ G    G+LG G+
Sbjct: 196 IIDLNQTIPMQI----QDIPEEVVDVSGGWAF--SAAVTKSG-RLYTWGFNEKGQLGLGN 248

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           R     P+L++   L+++  V V  G  H   +   G V +WG G +G LGHGN +    
Sbjct: 249 RWFHSTPQLVKT--LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLH 306

Query: 254 PKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNR 307
           PK +Q   ++  +   VA G   T V S  G +Y+FG GE   LG       +  G  + 
Sbjct: 307 PKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDN 366

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           H     P +V SL+          + N    + HT  +T+  ++Y +G G  G LG+
Sbjct: 367 HFKYSIPIVVKSLETKK-------IKNVACGHLHTIVVTDENEVYQWGWGSSGALGL 416



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 23/297 (7%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGI--RIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           N    K   LG+ ++        +Q I   ++  + G   +  ++ +G++Y +G +  G+
Sbjct: 184 NSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQ 243

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
              G+      ++PQLV++L ++ +V    G      ++ +G VY++  G   +LGH   
Sbjct: 244 L--GLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNV 301

Query: 139 PNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD- 196
            + + P  +   +E N  + Q+A G  + +  + Q  G+ +Y+ G G  G+LG    T  
Sbjct: 302 KSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQ--GL-LYAFGHGEYGQLGSTEETQH 358

Query: 197 ------EKH-----PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
                 + H     P +++  +   ++ V  A G  H  VV  +  V  WGWG  G LG 
Sbjct: 359 LDFGGRDNHFKYSIPIVVKSLETKKIKNV--ACGHLHTIVVTDENEVYQWGWGSSGALGL 416

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           GN+  + VP+++ +L+  +   +  G+  T VV    DV SF     + +     AD
Sbjct: 417 GNKRFQLVPQLITSLSGEEIASITAGEKHTIVV-RCSDVTSFAYDYKSLINEKKYAD 472



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 14/127 (11%)

Query: 232 VCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           V + G  + G LGH + +EC   P V++ L   + I   +G+  +  VS  GDVYS+G  
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLE-PTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRS 61

Query: 291 ESASLGHNAIADGQG--NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
           +   LG   I  G G  ++   V  P L+ SL+  +ER+++++       N H+ ALT+ 
Sbjct: 62  KEGQLG---IGQGYGGSDKVMFVAKPTLIKSLQ--HERIIKVACG-----NFHSLALTDM 111

Query: 349 GKLYAFG 355
           GK+Y +G
Sbjct: 112 GKVYEWG 118



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M+V SVG    G+LGH S  +   P +IE   LL  + +   +G  H+  V + G V +W
Sbjct: 1   MSVLSVGQSKNGQLGHDSIKECLEPTVIE--GLLGKRIIQTVSGEAHSLAVSRFGDVYSW 58

Query: 236 GWGRYGCLGH-----GNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           G  + G LG      G+++   V  P ++++L   + I VA G++ +  +++ G VY +G
Sbjct: 59  GRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 41/258 (15%)

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
             + +LGH +    +EP  + G L    ++Q  +G  + LA++       VYS G    G
Sbjct: 9   SKNGQLGHDSIKECLEPTVIEGLLGK-RIIQTVSGEAHSLAVS---RFGDVYSWGRSKEG 64

Query: 188 KLGHGSR---TDE----KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
           +LG G     +D+      P LI+  Q  + + + VA G +H+  +   G+V  WG    
Sbjct: 65  QLGIGQGYGGSDKVMFVAKPTLIKSLQ--HERIIKVACGNFHSLALTDMGKVYEWGQLHR 122

Query: 241 GCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYT------------TFVVSEDGDVYS 286
                 + + +S   +++   L+  + I  +   Y             T    +D D  +
Sbjct: 123 LDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEA 182

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
               +S S     I D         L   +   ++ + E VV +S      W A + A+T
Sbjct: 183 SNSAQSKSKHLGKIID---------LNQTIPMQIQDIPEEVVDVSGG----W-AFSAAVT 228

Query: 347 ESGKLYAFGAGDKGQLGI 364
           +SG+LY +G  +KGQLG+
Sbjct: 229 KSGRLYTWGFNEKGQLGL 246


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 156/319 (48%), Gaps = 32/319 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++  G+VYA G + + +  + +   +    PQL+  L++  ++Q + G+
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGS 99

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  LS  G+V   SWG++   +LGH TE   V+   ++  L +  VVQIA G  + LA
Sbjct: 100 RHSLALSDWGQV--LSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++ 
Sbjct: 158 LT---SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + G V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V+
Sbjct: 215 KSGAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 272

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH           +N + P++V  L  +   + Q++  N      HT AL
Sbjct: 273 TCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLAL 317

Query: 346 TES-GKLYAFGAGDKGQLG 363
             S GK+YAFG G  GQLG
Sbjct: 318 VPSRGKVYAFGLGSSGQLG 336



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 40/298 (13%)

Query: 7   QVAHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAG 66
           Q+ H  P  RP +I E                     LQ   IIQ + G+  ++ +SD G
Sbjct: 71  QLGHDLPTKRPQLIPE---------------------LQDYVIIQISCGSRHSLALSDWG 109

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           QV ++G +  G+  +  +  ++V  P++V  L +  VVQ A GN  +  L+  G +Y  S
Sbjct: 110 QVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELY--S 166

Query: 127 WGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALACQPSGMAVY 179
           WG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++     SG AV+
Sbjct: 167 WGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS----KSG-AVF 220

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
             G    G+LG    T+  +P  ++  + L ++   VA G   +  +  +G V T G G 
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 296
           YG LGHG    E +P++V  L       VA G+ +T  +V   G VY+FG G S  LG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLG 336



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G+   GV     +T 
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVNSPNDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   G+V  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   PR I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  +     P+++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   G+VY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 3052 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRL 3110

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3111 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3168

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 3169 RSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 3224

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+        + + VA G+  A  +   +DG V +WG G +G LG G  E  + P 
Sbjct: 3225 LKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPH 3282

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3283 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3334

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3335 PIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3375



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R IQ A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4222 TPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4279

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ +G VY +  G D +LGH    +   P  LL  L  +
Sbjct: 4280 SLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPK-LLEHLNGM 4338

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4339 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4393

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4394 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4453

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4454 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4502

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4503 TGSL----HCVACSDAGEVYTWGDNDEGQLG 4529



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDI 3189

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 3190 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALHGRRVIQVACGSRDA 3248

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 3249 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--IQIECGAQFSLAL 3305

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3306 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3365

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++S+ W     +L 
Sbjct: 3366 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAWGLPNASLD 3417

Query: 347  ESGK 350
            E  +
Sbjct: 3418 EEKR 3421



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+L+
Sbjct: 4275 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMS--YDRPKLL 4332

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4333 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4391

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4392 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 4448

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4449 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4508

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4509 VACSDAGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4556

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4557 ---SAHTLALSTS 4566



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 34/282 (12%)

Query: 90  TSPQLV---ESLKNIFVVQAA--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           T PQL+   E     FV  AA   G  F AV S     Y++  G+  RLGH     D   
Sbjct: 602 TEPQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHN-AYSWGVGDSRRLGH----GDCHA 656

Query: 145 HPLLGTLENIPVVQIAAGYC---YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             L   +E++ V ++ + YC   Y  A+  + +   +Y+ G G  G+LGHG+  D+  P 
Sbjct: 657 RELPTKIESL-VRRVQSVYCGCSYSAAITLRGN---LYTWGRGTYGRLGHGNSDDQCMPA 712

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           ++   +   +  V + +G  H   + + G V  WG G YG LG+G+      P +++ L 
Sbjct: 713 MVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLP 772

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSL 320
            V+   V  G   +  ++ +G +YS+  G+++ LGH  +    QG        P+L+TSL
Sbjct: 773 RVQ--RVFAGSQFSLALTCEGQLYSW--GKASCLGHQLVERNVQGCS-----VPRLITSL 823

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           +  ++R+V +++       AH  AL+ +G+++ +G  D  Q+
Sbjct: 824 Q--HKRIVHVAVG-----VAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 42/284 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPN-------DV 142
           P   + L +  +  AA  N  + +L ++ RVY   W   +  + G + EP          
Sbjct: 502 PHPTQLLPSCLLRPAATPNTASTILEQQ-RVYALGWPALSKEQQGFNVEPALSWTSAATQ 560

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           +P P L T +   + Q+A     ++ L CQ   +  + +               E  P+L
Sbjct: 561 QPPPALLTCK-FQLKQVACSE-DMVVLLCQEGKLYNWPIA------------KPETEPQL 606

Query: 203 IEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           ++  ++ N   V +AA     H   V  +    +WG G    LGHG+     +P  +++L
Sbjct: 607 LDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL 666

Query: 261 NDVKAIH-VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
             V+ +  V  G   +  ++  G++Y++G G    LGH       GN     + P +V +
Sbjct: 667 --VRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGH-------GNSDDQCM-PAMVMA 716

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           LK  + +V+ ++L +    +AHT  LT  G +YA+G GD G+LG
Sbjct: 717 LK--DHQVLDVALGSG---DAHTLCLTRGGLVYAWGDGDYGKLG 755



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + FVVS+DG VY+ G G 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3107 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3153

Query: 352  YAFGAGDKGQLG 363
            +++G G+ G+LG
Sbjct: 3154 FSWGEGEDGKLG 3165



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 14/195 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   +  I+  G +Y +G+ ++G   +G    + +  P +V +LK+  V+  A
Sbjct: 669 RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM--PAMVMALKDHQVLDVA 726

Query: 108 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYC 164
           +  G+  T  L+R G VY +  G+  +LG+ +  + ++  PLL  +E +P VQ + AG  
Sbjct: 727 LGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQ--PLL--IECLPRVQRVFAGSQ 782

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           + LAL C+    +     C LG +L   +      PRLI   Q  + + V VA G  H  
Sbjct: 783 FSLALTCEGQLYSWGKASC-LGHQLVERNVQGCSVPRLITSLQ--HKRIVHVAVGVAHCL 839

Query: 225 VVGQDGRVCTWGWGR 239
            +  +G +  +GWGR
Sbjct: 840 ALSSNGEI--FGWGR 852



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 3339 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3396

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3397 NRVACGS 3403


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P +  ++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 3068 LNDKEQLGGLKGSKVK-VPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRL 3126

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3127 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3184

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 3185 RSTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 3240

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E  S P 
Sbjct: 3241 LKPKLVAA--LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPH 3298

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  I +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3299 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3350

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3351 PIAGLR--GHRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3391



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4237 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4294

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ +G VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4295 SLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4353

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4354 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4408

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4409 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4468

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4469 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------EHVRRPKKVAALQ--GKKIISIA- 4517

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A +++G+++ +G  D+GQLG
Sbjct: 4518 TGSL----HCVACSDAGEVFTWGDNDEGQLG 4544



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 14/304 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 3148 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRLVEALRAKKIRDI 3205

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 3206 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVAALSGRRVIQVACGSRDA 3264

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  + +  GA  +  +
Sbjct: 3265 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGV--IQIECGAQFSLAL 3321

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3322 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYA 3381

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G  +           G GN   N   P LV  L  V    V    ++S+ W     +L 
Sbjct: 3382 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVIVNRVACGSSHSMAWGLPNASLD 3433

Query: 347  ESGK 350
            E  +
Sbjct: 3434 EEKR 3437



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4290 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4347

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4348 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4406

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4407 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 4463

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ E    PK V AL   K I +ATG    
Sbjct: 4464 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHC 4523

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+V+++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4524 VACSDAGEVFTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4571

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4572 ---SAHTLALSTS 4581



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 27/257 (10%)

Query: 109 GNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G  F AV   +     +SWG  +  RLGH     D     L   +E++ V  + + YC  
Sbjct: 655 GRHFLAV---DSNFNAYSWGVGDSRRLGH----GDCHARELPTKIESL-VRLVKSVYCGC 706

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              A    G  +Y+ G G  G+LGHG+  D+  P ++   +   +  V + +G  H   +
Sbjct: 707 SYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCL 766

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G V  WG G YG LG+G+     +P+++  L  V+   V  G   +  +S +G +YS
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ--RVFAGAQFSLALSCEGQLYS 824

Query: 287 FGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +  G+++ LGH  +    QG        P+L+T L+  ++R+V +++       AH  AL
Sbjct: 825 W--GKASCLGHQLVERNVQG-----CSVPRLITGLQ--HKRIVDVAVG-----VAHCLAL 870

Query: 346 TESGKLYAFGAGDKGQL 362
           + SG+++ +G  D  Q+
Sbjct: 871 SSSGEIFGWGRNDNQQI 887



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 122/274 (44%), Gaps = 42/274 (15%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 163
           Q A       +LS+EG++Y +          H    + EP  L    + N   + IAA +
Sbjct: 604 QVACSEDVVLLLSKEGKLYNW----------HIAKPEAEPQQLDFAEIANETFISIAA-H 652

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           C         S    YS G G   +LGHG     + P  IE    L      V  G  ++
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRLVKS---VYCGCSYS 709

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSED 281
           A +   G + TWG G YG LGHG  + + +P +V AL D + + VA  +GD  T  ++ +
Sbjct: 710 AAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSIYW 338
           G V+++G G+   LG     +G  N   + L PQL+  L +V +RV    Q SL      
Sbjct: 770 GLVFAWGDGDYGKLG-----NGSCN---SSLLPQLIDCLPRV-QRVFAGAQFSL------ 814

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                AL+  G+LY++G      LG +LV    +
Sbjct: 815 -----ALSCEGQLYSWGKASC--LGHQLVERNVQ 841



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 10/250 (4%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +GK     R     P    +L+  +I   A G+  +  IS  G++Y +G   +G   +G 
Sbjct: 3177 DGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGD 3236

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              T+L   P+LV +L    V+Q A G  +  T  L+ +G V+++  G+  +LG       
Sbjct: 3237 NATQL--KPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS 3294

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              PH  +  L  I V+QI  G  + LAL        V++ G G   +LGHG     + P+
Sbjct: 3295 STPHE-IERLSGIGVIQIECGAQFSLALT---RAGEVWTWGKGDYYRLGHGGDQHVRKPQ 3350

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             I   +    + + VA GA H   V   G+V  WG   +G  G GN      P +V  L+
Sbjct: 3351 PIAGLR--GHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLD 3408

Query: 262  DVKAIHVATG 271
             V    VA G
Sbjct: 3409 AVIVNRVACG 3418



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 116  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            LS  G    + WG++ R  LG         P P    L  +  VQ+A G   L A+   P
Sbjct: 4208 LSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPC-EALSLLRPVQLAGGEQSLFAVT--P 4264

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             G  +++ G G GG+LG G       P L+   Q + ++ V V +G  H   +  DG V 
Sbjct: 4265 DG-KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4323

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
             WG G  G LGHGN      PK+V+ LN +    +A G   +  ++  G V ++G G   
Sbjct: 4324 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4383

Query: 294  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
             LGH    D         L P+LV +L  +  R + I+  +    +A T  +T+   +++
Sbjct: 4384 RLGHGDSEDQ--------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWS 4430

Query: 354  FGAGDKGQLG 363
            +G GD G+LG
Sbjct: 4431 WGDGDYGKLG 4440



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 15/197 (7%)

Query: 47  IRIIQAA-AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           +R++++   G   +  I+  G +Y +G+ ++G   +G    + +  P +V +LK+  VV 
Sbjct: 696 VRLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCL--PAMVMALKDHQVVD 753

Query: 106 AAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAG 162
            A+  G+  T  L+ EG V+ +  G+  +LG+ +  + + P      ++ +P VQ + AG
Sbjct: 754 VALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQ----LIDCLPRVQRVFAG 809

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + LAL+C+    +     C LG +L   +      PRLI   Q  + + V VA G  H
Sbjct: 810 AQFSLALSCEGQLYSWGKASC-LGHQLVERNVQGCSVPRLITGLQ--HKRIVDVAVGVAH 866

Query: 223 AAVVGQDGRVCTWGWGR 239
              +   G +  +GWGR
Sbjct: 867 CLALSSSGEI--FGWGR 881



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 17/122 (13%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVV 104
           R+ +  AGA  ++ +S  GQ+Y++GK S  G    E  VQG  +   P+L+  L++  +V
Sbjct: 802 RVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSV---PRLITGLQHKRIV 858

Query: 105 QAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLG-----TLENIPVVQ 158
             A+G      LS  G +  F WG ND        P  V   PLL      TL  +P   
Sbjct: 859 DVAVGVAHCLALSSSGEI--FGWGRND---NQQICPASVCSEPLLRQPIQVTLPTLPASG 913

Query: 159 IA 160
           IA
Sbjct: 914 IA 915


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4068 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4125

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ EG VY +  G D +LGH    +   P  L+  L  +
Sbjct: 4126 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4184

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4185 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4239

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  + V  G 
Sbjct: 4240 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGS 4299

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4300 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4348

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 4349 TGSL----HCVACSDSGEVYTWGDNDEGQLG 4375



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+VYA G+ + G  
Sbjct: 2990 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 3048

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 3049 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3106

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  +A G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 3107 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNVTQ 3162

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + V VA G+  A  +   +DG V +WG G +G LG G  E    P 
Sbjct: 3163 LKPKLV--VALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 3220

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3221 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3272

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3273 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3313



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 3070 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 3127

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    VVQ+A G    
Sbjct: 3128 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPK-LVVALAGRRVVQVACGSRDA 3186

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  V +  GA  +  +
Sbjct: 3187 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLAL 3243

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3244 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3303

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G GN   N   P LV  L  V    V    ++SI W
Sbjct: 3304 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3347



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+LV
Sbjct: 4121 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4178

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4179 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4237

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  V 
Sbjct: 4238 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVK 4294

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4295 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4354

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4355 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4402

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4403 ---SAHTLALSTS 4412



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 41/328 (12%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
           L CR     +I Q A    + +++S  G++Y + + +  EAE           P  +E +
Sbjct: 565 LSCR----FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE-----------PLPMEEV 608

Query: 99  KNIFVVQAA---IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            +   +  A    G  F A+ S     Y++  G D RLGH        P  +   LE   
Sbjct: 609 AHEVFISIAGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHC 666

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +  G  Y  A+ C   G  + + G G   +LGHG+  D   P L+       +  V 
Sbjct: 667 VQSVYCGCSYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVA 723

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + +G  H+  +  +G V  WG G YG LG+GN      P +V++L  V+   V  G   +
Sbjct: 724 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFS 781

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
             +S +G +YS+  G++  LGH  +    QG        P+LV+SL+  ++R+V ++++ 
Sbjct: 782 LALSSEGQLYSW--GKATCLGHQLVERSVQG-----CSVPRLVSSLQ--HKRIVDVAVS- 831

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQL 362
                AH  AL+ SG+++ +G  D  Q+
Sbjct: 832 ----VAHCLALSSSGEVFGWGRNDSQQI 855



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 44/341 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQL 94
           PL  R L  +R  QA A +  T   +   ++YA G  S  + + G      ++       
Sbjct: 507 PLMPRCL--LRGGQATAASSST---TPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTA 561

Query: 95  VESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           V +L   F + Q A       +LS+EG++YT+      RL       + EP P+      
Sbjct: 562 VPTLSCRFQIKQVACCETQMLILSQEGKLYTW------RLAK----PEAEPLPMEEVAHE 611

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +  + IA G+C         S    YS G G   +LGHG       P  I   +   +Q 
Sbjct: 612 V-FISIA-GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQS 669

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TG 271
           V    G  ++A +   G + TWG G Y  LGHGN +  S+P +V AL+D   + VA  +G
Sbjct: 670 VY--CGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSG 727

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           D  +  ++ +G V+++G G+   LG+       GN + + L P LV SL +V +RV   S
Sbjct: 728 DAHSLALTSEGLVFAWGDGDYGKLGN-------GNCNGS-LQPILVESLPRV-QRVFAGS 778

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                     + AL+  G+LY++G      LG +LV    +
Sbjct: 779 --------QFSLALSSEGQLYSWGKATC--LGHQLVERSVQ 809



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + F+VS+DG VY+ G G 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3044

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 3045 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3091

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3092 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3117



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 3277 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3334

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3335 NRVACGS 3341



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQL 94
           P+   SL   R+ +  AG+  ++ +S  GQ+Y++GK +  G    E  VQG  +   P+L
Sbjct: 762 PILVESLP--RVQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSV---PRL 816

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--L 151
           V SL++  +V  A+       LS  G V  F WG ND++      P  V   PLL T  L
Sbjct: 817 VSSLQHKRIVDVAVSVAHCLALSSSGEV--FGWGRNDSQ---QICPASVSSEPLLRTPIL 871

Query: 152 ENIPVVQIAAGYC 164
            ++P    +   C
Sbjct: 872 VSLPTFPASGIAC 884


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 36/349 (10%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L    +    AG+  ++ I + G+++ +G +  G   +  + TK    P  V++L N 
Sbjct: 34  KALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPE-TKTENIPSQVKALANA 92

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-------ENI 154
            +VQAAIG +    +  +GR Y +      + G   E  D    PL   +         +
Sbjct: 93  KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKL 152

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V++     G     G       P  ++  + + L   
Sbjct: 153 SVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDIKQISTPVRVQGLEKVRL--- 202

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+D+  + +A G + 
Sbjct: 203 -IAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWH 261

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  +++DG VY +G GE   LG        G+  ++ + PQ V  L  V E +VQIS   
Sbjct: 262 STALTDDGGVYGWGRGEHGRLGF-------GDDKSSKMVPQKVQLL--VEENIVQISCGG 312

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           +     H+ ALT  G++++FG GD G+LG      +   G+P  V I+L
Sbjct: 313 T-----HSVALTRDGRMFSFGRGDHGRLGY---GRKVTTGHPMEVPINL 353



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 25/270 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 89
           P   ++L   +I+QAA G    + + D G+ YA+G + +G+         + G    + +
Sbjct: 83  PSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDI 142

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           T PQ   S   + V Q A G   + VL+REG V+T+        G    P D++      
Sbjct: 143 TIPQRCAS--KLSVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISTPV 192

Query: 150 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            ++ +  V+ IA G  + LAL        +++ G    G+LG G       P  ++    
Sbjct: 193 RVQGLEKVRLIAVGAFHNLALL---EDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD 249

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIH 267
           L L  V +AAG WH+  +  DG V  WG G +G LG G+++    VP+ VQ L +   + 
Sbjct: 250 LTL--VDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQ 307

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           ++ G   +  ++ DG ++SFG G+   LG+
Sbjct: 308 ISCGGTHSVALTRDGRMFSFGRGDHGRLGY 337



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 48/237 (20%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +A +P   A+ S G G  G+LG G+  +++    ++     N+  VV  AG+ ++  + +
Sbjct: 1   MASKPK--AIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVV--AGSRNSLAICE 56

Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           DG++ TWGW + G LGH  E + E++P  V+AL + K +  A G +    V + G  Y++
Sbjct: 57  DGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAW 116

Query: 288 G------CGE----------------------SASLGHNAIADGQGNRHANVLT------ 313
           G      CGE                      ++ L    +A   G  H+ VLT      
Sbjct: 117 GGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVA--AGGTHSVVLTREGHVW 174

Query: 314 ----PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
               P     +KQ++   RV  +     I   A H  AL E G L+A+G  + GQLG
Sbjct: 175 TWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 15/152 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           + +WG G  G LG GN E +     V+AL       V  G   +  + EDG ++++G  +
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH         +  N+  P  V +L   N ++VQ ++     W  H  A+ + G+ 
Sbjct: 68  RGTLGHPPE-----TKTENI--PSQVKAL--ANAKIVQAAIGG---W--HCLAVDDQGRA 113

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           YA+G  + GQ G E    + + G P R DI +
Sbjct: 114 YAWGGNEYGQCG-EEPERKDDTGRPLRRDITI 144


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 163/328 (49%), Gaps = 29/328 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C +L  +R +Q   G  +T+       VYA G  +      G+ GT+ V+SP L+ES
Sbjct: 332 PTPCDALAALRPVQLIGGE-QTLF-----AVYATGYGA--GGRLGIGGTESVSSPTLLES 383

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ++++ + + A+  G      LS EG V+++    D +LGH    N  +   ++ +L    
Sbjct: 384 IQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR-NSCDRPRVIESLRGKE 442

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV IAAG  +    AC  S   +++ G G  G+LGHG   D+  P+L+E  + + +  V 
Sbjct: 443 VVDIAAGGAHS---ACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVA 499

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             +G      +  D  V +WG G YG LG G  +   +P+ V+AL     + V  G   +
Sbjct: 500 CGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFS 559

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G VY++G G+   LGH +          +V  P+ V +L+  N  V+ I+ T S
Sbjct: 560 VALTKSGCVYTWGKGDYHRLGHGS--------DDHVRRPRKVAALQGKN--VISIA-TGS 608

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +    H  A T+ G+++ +G  D+GQLG
Sbjct: 609 L----HCVACTDQGEVFTWGDNDEGQLG 632



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 18/321 (5%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           E   +P    S+Q + I + A  +G    + +S  G+V+++G+   G+  +G + +    
Sbjct: 373 ESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS--CD 430

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            P+++ESL+   VV  A G   +A ++  G ++T+  G   RLGH    + ++P  L+  
Sbjct: 431 RPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPK-LVEA 489

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L+ + V+ +A G      L C     +V+S G G  GKLG G     K P+ +E   L+ 
Sbjct: 490 LKGVRVIDVACGSGDAQTL-CITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVE--ALIG 546

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
              V V  G+  +  + + G V TWG G Y  LGHG+++    P+ V AL     I +AT
Sbjct: 547 QGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIAT 606

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G       ++ G+V+++G  +   LG  +         + +  P+LV +L+      V  
Sbjct: 607 GSLHCVACTDQGEVFTWGDNDEGQLGDGST--------SAIPRPRLVAALQGKKINRVAC 658

Query: 331 SLTNSIYWNAHTFALTESGKL 351
              +S+ W+  T     +GKL
Sbjct: 659 GSAHSLAWS--TSKPVNAGKL 677



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 116 LSREGRVYTFSWGNDARL-----GHHTEPNDVE------PHPLLGTLENIPVVQIAAGYC 164
           LSR    +T SWG   ++      H  +   VE      P P    L  +  VQ+  G  
Sbjct: 293 LSRRPDDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVKLPTPC-DALAALRPVQLIGGEQ 351

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            L A         VY+ G G GG+LG G       P L+E  Q ++++ V V +G  H  
Sbjct: 352 TLFA---------VYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCL 402

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            +  +G V +WG    G LGHGN      P+V+++L   + + +A G   +  ++  G++
Sbjct: 403 ALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGEL 462

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +++G G    LGH    D         + P+LV +LK V  RV+ ++  +    +A T  
Sbjct: 463 FTWGKGRYGRLGHGDSEDQ--------MKPKLVEALKGV--RVIDVACGSG---DAQTLC 509

Query: 345 LTESGKLYAFGAGDKGQLG 363
           +T+   ++++G GD G+LG
Sbjct: 510 ITDDDSVWSWGDGDYGKLG 528



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 25/255 (9%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G RN   R     P    SL+G  ++  AAG   +  I+  G+++ +GK  +G   +G 
Sbjct: 423 HGNRNSCDR-----PRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGD 477

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTE--- 138
              ++   P+LVE+LK + V+  A   G+  T  ++ +  V+++  G+  +LG       
Sbjct: 478 SEDQM--KPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGC 535

Query: 139 --PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
             P  VE   L+G      VV++  G  + +AL    SG  VY+ G G   +LGHGS   
Sbjct: 536 KIPQKVE--ALIGQ----GVVKVECGSQFSVALT--KSG-CVYTWGKGDYHRLGHGSDDH 586

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
            + PR +   Q  N+  + +A G+ H       G V TWG    G LG G+      P++
Sbjct: 587 VRRPRKVAALQGKNV--ISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRL 644

Query: 257 VQALNDVKAIHVATG 271
           V AL   K   VA G
Sbjct: 645 VAALQGKKINRVACG 659


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G+    L +  G+V+ +G++  G   +G      +  P+LVESL    V   
Sbjct: 275 LDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYI 332

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T V++  G +Y   WG    N   LGH T  +   P  + G LE + V+ +A G
Sbjct: 333 ACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACG 390

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +++ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 391 SWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWH 445

Query: 223 AAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A +              ++ TWG G    LGHG++E + VP  VQAL D     VA G 
Sbjct: 446 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGH 505

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G   +  LG N  ADG+         P +V   K  NE V +IS 
Sbjct: 506 SMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLGNELVEEISC 555

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++     H  ALT   ++Y +G G  G+LG
Sbjct: 556 GSN-----HVAALTSRSEVYTWGMGANGRLG 581



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 43/322 (13%)

Query: 62  ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           I   G VY +G+       S G + Y    T  +  P+ +ES   + V Q A G+    +
Sbjct: 231 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 289

Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            +R+G V+T  WG +   RLGH T+ +   P  L+ +L    V  IA G  +   +    
Sbjct: 290 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 344

Query: 174 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G G    G LGHG+      P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 345 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 402

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 281
           + T+G G +G LGHG+ E  + PK V+AL+  +A+ VA G + +  + E           
Sbjct: 403 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 462

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
             ++++G G+   LGH       G++ A  L P  V +L  V+    Q++  +S+     
Sbjct: 463 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 507

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T AL  SG ++  G+ + GQLG
Sbjct: 508 TVALATSGHVFTMGSSNNGQLG 529



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     
Sbjct: 379 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRA 436

Query: 104 VQAAIGNFFTA-VLSREGRVYT-------FSWGN--DARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A ++   G+  T       F+WG+    RLGH  +   + P   +  L +
Sbjct: 437 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVD 495

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N   
Sbjct: 496 HNFHQVACGHSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELV 550

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ G+ H A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G +
Sbjct: 551 EEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSN 610

Query: 273 YTTFV 277
           +TT +
Sbjct: 611 FTTCI 615


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G+    L +  G+V+ +G++  G   +G      +  P+LVESL    V   
Sbjct: 261 LDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYI 318

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T V++  G +Y   WG    N   LGH T  +   P  + G LE + V+ +A G
Sbjct: 319 ACGEFHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACG 376

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +++ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 377 SWHS---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWH 431

Query: 223 AAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A +              ++ TWG G    LGHG++E + VP  VQAL D     VA G 
Sbjct: 432 SAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGH 491

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G   +  LG N  ADG+         P +V   K  NE V +IS 
Sbjct: 492 SMTVALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLGNELVEEISC 541

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++     H  ALT   ++Y +G G  G+LG
Sbjct: 542 GSN-----HVAALTSRSEVYTWGMGANGRLG 567



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 43/322 (13%)

Query: 62  ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           I   G VY +G+       S G + Y    T  +  P+ +ES   + V Q A G+    +
Sbjct: 217 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLI-PKPLESDVVLDVQQIACGSRHIGL 275

Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            +R+G V+T  WG +   RLGH T+ +   P  L+ +L    V  IA G  +   +    
Sbjct: 276 TTRQGEVFT--WGEELGGRLGHGTDTDICRPK-LVESLAVSNVEYIACGEFHTCVVTA-- 330

Query: 174 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G G    G LGHG+      P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 331 SG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PLEGLQVLSVACGSWHSALTMSSGK 388

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 281
           + T+G G +G LGHG+ E  + PK V+AL+  +A+ VA G + +  + E           
Sbjct: 389 LFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMS 448

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
             ++++G G+   LGH       G++ A  L P  V +L  V+    Q++  +S+     
Sbjct: 449 RKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQAL--VDHNFHQVACGHSM----- 493

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T AL  SG ++  G+ + GQLG
Sbjct: 494 TVALATSGHVFTMGSSNNGQLG 515



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     
Sbjct: 365 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRA 422

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +          +   +++T+  G+  RLGH  +   + P   +  L +
Sbjct: 423 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVD 481

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N   
Sbjct: 482 HNFHQVACGHSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELV 536

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ G+ H A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G +
Sbjct: 537 EEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSN 596

Query: 273 YTTFV 277
           +TT +
Sbjct: 597 FTTCI 601


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 151/327 (46%), Gaps = 38/327 (11%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G+    L +  G+V+ +G++  G   +G      +  P+LVESL    V   A G 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTD--ICRPKLVESLAVSNVEYIACGE 286

Query: 111 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           F T V++  G +Y   WG    N   LGH T  +   P  + G LE + V+ +A G  + 
Sbjct: 287 FHTCVVTASGDLY--DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 344

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              A   S   +++ G G  G LGHG R    +P+ +E   L   + + VA G WH+A +
Sbjct: 345 ---ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEA--LSGFRAMKVACGVWHSAAI 399

Query: 227 ----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                         ++ TWG G    LGHG++E + VP  VQAL D     VA G   T 
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTV 459

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G V++ G   +  LG N  ADG+         P +V   K  NE V +IS  ++ 
Sbjct: 460 ALATSGHVFTMGSSNNGQLG-NPKADGK--------QPCMVQD-KLGNELVEEISCGSN- 508

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
               H  ALT   ++Y +G G  G+LG
Sbjct: 509 ----HVAALTSRSEVYTWGMGANGRLG 531



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 38/285 (13%)

Query: 95  VESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGT 150
           +ESL +++V   Q A G+    + +R+G V+T  WG +   RLGH T+ +   P  L+ +
Sbjct: 217 IESLGDVYVWGEQIACGSRHIGLTTRQGEVFT--WGEELGGRLGHGTDTDICRP-KLVES 273

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQL 208
           L    V  IA G  +   +    SG  +Y  G G    G LGHG+      P+ +    L
Sbjct: 274 LAVSNVEYIACGEFHTCVVT--ASG-DLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG-PL 329

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+  +A+ V
Sbjct: 330 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 389

Query: 269 ATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           A G + +  + E             ++++G G+   LGH       G++ A  L P  V 
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGH-------GDKEAK-LVPTCVQ 441

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +L  V+    Q++  +S+     T AL  SG ++  G+ + GQLG
Sbjct: 442 AL--VDHNFHQVACGHSM-----TVALATSGHVFTMGSSNNGQLG 479



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L   +G+++ FG  +FG   +G + +  V  P+ VE+L     
Sbjct: 329 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRES--VAYPKEVEALSGFRA 386

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +          +   +++T+  G+  RLGH  +   + P   +  L +
Sbjct: 387 MKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVP-TCVQALVD 445

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +ALA   +   V+++G    G+LG+  + D K P ++ Q +L N   
Sbjct: 446 HNFHQVACGHSMTVALA---TSGHVFTMGSSNNGQLGN-PKADGKQPCMV-QDKLGNELV 500

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ G+ H A +     V TWG G  G LGHG+ E +  P +V AL D     ++ G +
Sbjct: 501 EEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSN 560

Query: 273 YTTFV 277
           +TT +
Sbjct: 561 FTTCI 565


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 166/347 (47%), Gaps = 25/347 (7%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G +V  +P  C  L  ++    A G+  T  I++ G++Y+ G+ SFG+ 
Sbjct: 565 LNDKDQLGGLKGSKVK-SPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKL 623

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHH 136
             G   T  VTSP+LV  L  + V + ++   GN   A L+ +G  +++  G + +LGH 
Sbjct: 624 GIG-DITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMA-LTSDGLAFSWGDGENGQLGHG 681

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
              +  +PH +   +  I V  I+ G  +  A+        +Y+ G G  G+LGHG    
Sbjct: 682 NLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIV---ENKYLYTWGLGDFGRLGHGDEET 737

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P+ +  F   N+  V   +       +  D +V +WG G +G LG G  E   +P  
Sbjct: 738 ILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVE 797

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V+ L  ++   +  G   T  +++ G V+++G G+   LGH            +V  P+L
Sbjct: 798 VEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGT--------DIHVRQPKL 849

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V  L+   + V+ I++        H  A+T+ G+++++G  D GQLG
Sbjct: 850 VEGLR--GKHVIDIAVG-----ALHCLAVTQDGEVFSWGDNDHGQLG 889



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 23/305 (7%)

Query: 61   LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSR 118
            + +D   V+A G  + G+   G   T  VTSP+L+ES+K+I + + ++  G      LS 
Sbjct: 1489 ITTDGALVFATGYGNNGQLGLGYSET--VTSPRLLESIKHINIKKISVHSGGRHCLALSS 1546

Query: 119  EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
            +G V+++  G D +LGH       +P  +      I +  I AG  +  A+        +
Sbjct: 1547 DGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGE---L 1602

Query: 179  YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
            Y+ G G  G+LGHG   D+  P+ +E  Q   +  V   +G      +  D  V +WG G
Sbjct: 1603 YTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDG 1662

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             YG LG G  +   VP +++ L+    + V  G   +  +++ G +Y++G G+   LGH 
Sbjct: 1663 DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHG 1722

Query: 299  AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                       +V  P +VT+L   N+ V  IS       + H    T+ G++Y +G  D
Sbjct: 1723 T--------EEHVRRPMMVTAL--FNKIVTSISCG-----SLHCVVCTDEGEVYCWGDND 1767

Query: 359  KGQLG 363
            +GQLG
Sbjct: 1768 EGQLG 1772



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 147/327 (44%), Gaps = 23/327 (7%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
            NG+  L   E   +P    S++ I I  I   +G    + +S  G+V+++G+   G+  +
Sbjct: 1504 NGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGH 1563

Query: 82   GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
            G + T   + P+ +E      +     G   +A +   G +YT+  G   RLGH    + 
Sbjct: 1564 GNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQ 1621

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            ++P  +   L+   V+ +A G      L C  +   V+S G G  GKLG G     K P 
Sbjct: 1622 LKPKQV-EALQFFFVLDVACGSGDAQTL-CITNDDNVWSWGDGDYGKLGRGGSDGCKVPM 1679

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            +IE      +  V V  G+  +  + + G + TWG G Y  LGHG EE    P +V AL 
Sbjct: 1680 IIEDLSGKGI--VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALF 1737

Query: 262  DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            +     ++ G     V +++G+VY +G  +   LG   I   Q        TP L T L 
Sbjct: 1738 NKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQ--------TPTLNTFL- 1788

Query: 322  QVNERVVQISLTNSIYWNAHTFALTES 348
             +N+++ +IS       +AHT A + S
Sbjct: 1789 -LNKKIDRISCG-----SAHTIAWSTS 1809



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +  G  +   + G+  +  I +   +Y +G   FG   +G + T  +  P+ V  
Sbjct: 689 PHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEET--ILQPKFVTH 746

Query: 98  LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
                VVQ + G  +  T  ++ + +V+++  G+  +LG       + P  +   L  + 
Sbjct: 747 FLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEV-EQLRGLQ 805

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           + +I  G  + +AL    +G  V++ G G   +LGHG+    + P+L+E  +      + 
Sbjct: 806 ICKILCGAQFTVALT--KTG-TVWTWGKGDFYRLGHGTDIHVRQPKLVEGLR--GKHVID 860

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A GA H   V QDG V +WG   +G LG G  + + VP ++  L++ +  +VA G   +
Sbjct: 861 IAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHS 920

Query: 276 FVVSE 280
              +E
Sbjct: 921 IAWTE 925



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 12/132 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG      LG         P +   L+ ++   +A G  +TF ++  G +YS  CGE
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYS--CGE 617

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
           S S G   I D  G    NV +P+LVT L Q+   V ++S+ +      H  ALT  G  
Sbjct: 618 S-SFGKLGIGDITG----NVTSPRLVTGLNQL--IVTKVSVHSG---GNHVMALTSDGLA 667

Query: 352 YAFGAGDKGQLG 363
           +++G G+ GQLG
Sbjct: 668 FSWGDGENGQLG 679


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 47/373 (12%)

Query: 5   AYQVAHLSPILRPDIINERNGKRNLL--GREVNGT----------PLYCRSLQGIRIIQA 52
           ++ +AHL  +  P I      K N    G+ V G           P  C +L  + I Q 
Sbjct: 417 SFIMAHLDRLAEPHIPPLSFNKSNFYYNGQRVFGWGWFSWIFGVGPQNCDTLSELTIKQI 476

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI---G 109
                  ++++  G+V+     S  +             PQ + +L +  V++ A    G
Sbjct: 477 CCSDRTILILTQTGKVFFMYYSSDTQC------------PQEMTALDDKEVIKIAAHPEG 524

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
             + A L+++  VY++  G+  RLGH       EP  L+  L+   ++ +  G  Y  A+
Sbjct: 525 KHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKEEP-TLIQALKGKDIIDVECGGTYSAAI 582

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           +   +  A+Y+ G G  G+LGHG+  D   P +I      ++  V   +   H   +   
Sbjct: 583 S---ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQ 639

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G+V +WG G YG LG G  +   +P++++ L +VK + V  G   +  +SEDG VY++G 
Sbjct: 640 GKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGK 699

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           GE   LGH            NV  P++V  L+  + +VV +SL  S     H  ALT+ G
Sbjct: 700 GEGWKLGHPT--------EENVRFPEMVEVLR--DRKVVGVSLGVS-----HVLALTDQG 744

Query: 350 KLYAFGAGDKGQL 362
           ++Y +G  +  Q+
Sbjct: 745 EVYGWGKNENKQI 757



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 39/278 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           PQ  ++L  + + Q    +    +L++ G+V+   + +D +               +  L
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSSDTQCPQE-----------MTAL 510

Query: 152 ENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           ++  V++IAA   G  YL AL        VYS G G GG+LGHG  + ++ P LI+  + 
Sbjct: 511 DDKEVIKIAAHPEGKHYL-ALT---KDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKG 566

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            ++  + V  G  ++A +  +G + TWG G YG LGHG  E    P ++ AL+D   I V
Sbjct: 567 KDI--IDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKV 624

Query: 269 ATGDYT--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           A G +   T  ++  G VYS+G G+   LG    +DG          P+L+  L+ V  +
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGG-SDGSK-------LPRLIEKLQNV--K 674

Query: 327 VVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
           +VQ+      Y  A  + AL+E G +Y +G G+  +LG
Sbjct: 675 IVQV------YCGAQFSVALSEDGHVYTWGKGEGWKLG 706


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP  C +L  +R +Q A G      ++  G+++A G  S G    G   +  +  P L+ 
Sbjct: 4093 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSI--PTLLG 4150

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            SL+++FV + A+  G      L+ +G VY +  G D +LGH    +   P  LL  L  +
Sbjct: 4151 SLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPK-LLEHLNGM 4209

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E   LL  + +
Sbjct: 4210 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4264

Query: 215  VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  +  I V  G 
Sbjct: 4265 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGS 4324

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   ++++ I+ 
Sbjct: 4325 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4373

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            T S+    H  A +++G++Y +G  D+GQLG
Sbjct: 4374 TGSL----HCVACSDAGEVYTWGDNDEGQLG 4400



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 28/348 (8%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P + +++  +R I  A G+    ++S  G+V+A G+ + G  
Sbjct: 2919 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRL 2977

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              GV  T  V  P  +  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2978 GLGV--THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3035

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  L+  L    +  IA G  +  A++ Q     +Y+ G G  G+LGHG    +
Sbjct: 3036 RTTLDKPR-LVEALRAKKIRDIACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNATQ 3091

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P+L+    L   + + VA G+  A  +   +DG V +WG G +G LG G  E  + P 
Sbjct: 3092 LKPKLVTA--LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPH 3149

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             ++ L+ +  + +  G   +  ++  G+V+++G G+   LGH       G++H  V  PQ
Sbjct: 3150 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3201

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  L+    RV+ +++        H  A+T++G++YA+G  D GQ G
Sbjct: 3202 PIAGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3242



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            ++ +   +G    + ++  G+V+++G+   G+  +G + T  +  P+LVE+L+   +   
Sbjct: 2999 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDI 3056

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            A G+  +A +S +G +YT+  G   RLGH      ++P  L+  L    V+Q+A G    
Sbjct: 3057 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPK-LVTALCGSRVIQVACGSRDA 3115

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              LA    G AV+S G G  GKLG G       P  IE+   + +  V +  GA  +  +
Sbjct: 3116 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGV--VQIECGAQFSLAL 3172

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V TWG G Y  LGHG ++    P+ +  L   + IHVA G      V++ G VY+
Sbjct: 3173 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3232

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            +G  +           G GN   N   P LV  L  V    V    ++S+ W
Sbjct: 3233 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSMAW 3276



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 145/313 (46%), Gaps = 23/313 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            P    SLQ + + + A  +G    + ++  G+VYA+G+   G+  +G + +     P+L+
Sbjct: 4146 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLS--YDRPKLL 4203

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L    
Sbjct: 4204 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4262

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             + IA G      L C      V+S G G  GKLG G     K P  IE   L  L  + 
Sbjct: 4263 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVIK 4319

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG    
Sbjct: 4320 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4379

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               S+ G+VY++G  +   LG   +   Q         P+LV +L+   + +V+++    
Sbjct: 4380 VACSDAGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4427

Query: 336  IYWNAHTFALTES 348
               +AHT AL+ S
Sbjct: 4428 ---SAHTLALSTS 4437



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 49/327 (14%)

Query: 58  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT---------SPQLVESLKNIFVVQAAI 108
           RT+L  +  +VYA G  +  + + G      ++          P L+       V Q A 
Sbjct: 547 RTLL--EQQRVYALGWPTLSKEQQGFNVEPALSWTSASTQRPPPALLNC--KFHVKQVAC 602

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLL 167
                 +LS+EG++Y +          H    D EP PL  G + +   + IA+ +C   
Sbjct: 603 SKDIVLLLSKEGKLYNW----------HISKPDTEPQPLDFGDIGSETFISIAS-HCEGR 651

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
                 +    YS G G   +LGHG     + P  IE    L  +   V  G  ++A + 
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIES---LVRRVKSVYCGCSYSAAIT 708

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVY 285
             G + TWG G YG LGHG  + + +P +V AL D + + VA  +GD  T  ++ +G VY
Sbjct: 709 LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVY 768

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G G+   LG NA  +         L P L+  L +V +RV   S          + AL
Sbjct: 769 AWGDGDYGKLG-NASCNSS-------LQPLLIECLPRV-QRVFAGS--------QFSLAL 811

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTE 372
           T  G+LY++G      LG +LV    +
Sbjct: 812 TGEGQLYSWGKASC--LGHQLVERNVQ 836



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 116  LSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            LS  G    + WG++ R  LG         P P    L  +  VQ+A G   L A+   P
Sbjct: 4064 LSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPC-EALSLLRPVQLAGGEQSLFAVT--P 4120

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             G  +++ G G GG+LG G       P L+   Q + ++ V V +G  H   +  DG V 
Sbjct: 4121 DG-KLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4179

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
             WG G  G LGHGN      PK+++ LN +    +A G   +  ++  G V ++G G   
Sbjct: 4180 AWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4239

Query: 294  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
             LGH    D         L P+LV +L  +  R + I+  +    +A T  +T+   +++
Sbjct: 4240 RLGHGDSEDQ--------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWS 4286

Query: 354  FGAGDKGQLG 363
            +G GD G+LG
Sbjct: 4287 WGDGDYGKLG 4296



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           LV  +K+++      G  ++A ++  G +YT+  GN  RLGH    +   P  ++  L++
Sbjct: 690 LVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLP-TMVMALKD 743

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             VV +A G      L     G+ VY+ G G  GKLG+ S      P LIE    +    
Sbjct: 744 HQVVDVALGSGDAHTLCLTNEGL-VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ--- 799

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIHVA 269
             V AG+  +  +  +G++  + WG+  CLGH     N +  SVP+++ +L   + + VA
Sbjct: 800 -RVFAGSQFSLALTGEGQL--YSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVA 856

Query: 270 TGDYTTFVVSEDGDVYSFG 288
            G      +S  G+++ +G
Sbjct: 857 VGVTHCLALSSAGEIFGWG 875



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 16/149 (10%)

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V  WG      LG        VP   Q ++ ++ IH+A G  + FVVS+DG V++ G G 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            +  L       G G  H NV  P  +  L Q   + V +          H  ALT  GK+
Sbjct: 2974 NGRL-------GLGVTH-NVPLPHQLPVLHQYVVKKVAVHSGGK-----HALALTLDGKV 3020

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +++G G+ G+LG     N+T    P  V+
Sbjct: 3021 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3046



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 18/222 (8%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N R G  +   RE+   P    SL   R+     G   +  I+  G +Y +G+ ++G   
Sbjct: 670 NRRLGHGDCHSREL---PTKIESLVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLG 725

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTE 138
           +G+   + +  P +V +LK+  VV  A+G  +  T  L+ EG VY +  G+  +LG+ + 
Sbjct: 726 HGISDDQCL--PTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASC 783

Query: 139 PNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
            + ++  PLL  +E +P VQ + AG  + LAL  +    +     C LG +L   +    
Sbjct: 784 NSSLQ--PLL--IECLPRVQRVFAGSQFSLALTGEGQLYSWGKASC-LGHQLVERNVQGC 838

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
             PRLI   Q  + + V VA G  H   +   G +  +GWGR
Sbjct: 839 SVPRLITSLQ--HKRIVDVAVGVTHCLALSSAGEI--FGWGR 876



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            L+G R+I  A GA   + ++DAGQVYA+G +  G+   G   T +   P LV  L  +FV
Sbjct: 3206 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3263

Query: 104  VQAAIGN 110
             + A G+
Sbjct: 3264 NRVACGS 3270


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+++G++S G   +GV     V  P+L++SL NI +   A G + 
Sbjct: 310 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIDSLSNINIELVACGEYH 367

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 368 TCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 425

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 426 VT---SSGQLFTFGDGTFGVLGHGDRKSVSIPREVES--LKGLRTVRAACGVWHTAAVVE 480

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V AL +     VA G   T 
Sbjct: 481 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTV 540

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      LG N  ADG+         P  V       E  +  S    I
Sbjct: 541 ALTTSGHVYTMGSPVYGQLG-NPQADGK--------LPNRV-------EGRLSKSFVEEI 584

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 585 ACGAYHVAVLTSKTEVYTWGKGANGRLG 612



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 44/320 (13%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           +GV+   L+  P+ +ES   + V   A G    A+++++G V  FSWG ++  RLGH  +
Sbjct: 286 FGVKLDSLL--PKALESTVVLDVQNIACGGRHAALVTKQGEV--FSWGEESGGRLGHGVD 341

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTD 196
            + + P  L+ +L NI +  +A G  +  A+    SG  +Y+ G G    G LGHG+   
Sbjct: 342 SDVLHPK-LIDSLSNINIELVACGEYHTCAVTL--SG-DLYTWGDGTYNFGLLGHGNEVS 397

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ 
Sbjct: 398 HWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPRE 456

Query: 257 VQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQ 304
           V++L  ++ +  A G + T  V E             G ++++G G+   LGH       
Sbjct: 457 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------- 509

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           G++ A  L P  V +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG 
Sbjct: 510 GDKEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG- 560

Query: 365 ELVNNQTERGNPERVDIDLS 384
              N Q +   P RV+  LS
Sbjct: 561 ---NPQADGKLPNRVEGRLS 577



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ +GQ++ FG  +FG   +G +  K V+ P+ VESLK +  
Sbjct: 408 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRT 465

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 466 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAAL 524

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    SG  VY++G  + G+LG+  + D K P  +E  +L   
Sbjct: 525 VEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPNRVEG-RLSKS 579

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 580 FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACG 639

Query: 272 DYTTFVV 278
              T  +
Sbjct: 640 TNFTAAI 646



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 14/174 (8%)

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G G + D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG + 
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNI--ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDS 342

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
               PK++ +L+++    VA G+Y T  V+  GD+Y++G G      +N    G GN  +
Sbjct: 343 DVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVS 397

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + +        K+VN  +  I +++      HT  +T SG+L+ FG G  G LG
Sbjct: 398 HWVP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLG 444


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 172/365 (47%), Gaps = 51/365 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG--------EAEYGVQGTKLV 89
           PL    L+   I Q A G G T+ +   G VY++G  + G        +    V+G    
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH---HTEPND----- 141
            +P+++E L+++ V+Q A G+  T  L+++G++Y++  G   +LGH      P D     
Sbjct: 74  PTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCP 133

Query: 142 VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT----D 196
            +P P L+  L+N+ V Q+A G  + +A+    +   +YS G G  G+LGH   +    D
Sbjct: 134 YQPKPKLIVVLKNLEVKQVACGKAHTVAVL---NNGHLYSWGAGACGQLGHPDTSSFPAD 190

Query: 197 EKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--- 247
           E        PR +   +   L  +  + G  H  V+   G +  +G G  G LG GN   
Sbjct: 191 EDGYPYQPIPRCVTALKPFKL--IHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQ 248

Query: 248 -----EECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
                + C    VPK +++L  +  + ++ GD  +  +S +G VY++G      LG + I
Sbjct: 249 MPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDI 308

Query: 301 ADGQGNRHANVLT--PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            D   N         PQ V +L  +N+++V IS   +     HT ALTE G LY+FG   
Sbjct: 309 RDLPKNTDNKPYQPFPQKVVAL--MNKKIVAISCGET-----HTLALTEGGHLYSFGGNT 361

Query: 359 KGQLG 363
            GQLG
Sbjct: 362 CGQLG 366



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 52/330 (15%)

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE--- 138
           +G      P  ++ L+N  + Q A G+  T  +  +G VY  SWG  A  +LG  +    
Sbjct: 6   EGYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVY--SWGASACGQLGLASMKDL 63

Query: 139 PNDVEPHP------LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           P DVE +P      ++  L+++ V+QIA G  + +AL        +YS G G  G+LGH 
Sbjct: 64  PTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALT---QDGKLYSWGGGGCGQLGHP 120

Query: 193 SRT----DEK------HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             +    DE        P+LI    L NL+   VA G  H   V  +G + +WG G  G 
Sbjct: 121 DTSAMPKDEDGCPYQPKPKLI--VVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQ 178

Query: 243 LGHGNEEC----------ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           LGH +             + +P+ V AL   K IH + GD  T V+++ G++Y FG G  
Sbjct: 179 LGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSC 238

Query: 293 ASLGHNAIADGQGNRHANVL--TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
             LG   I+    +  +      P+ + SL+ +   +V +S  +S     H+ AL+  G 
Sbjct: 239 GQLGFGNISQMPLDVDSCPFMPVPKKIESLQGI--FIVSLSCGDS-----HSMALSREGH 291

Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           +YA+G    GQLG++ +     R  P+  D
Sbjct: 292 VYAWGEATYGQLGLDDI-----RDLPKNTD 316


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 150/315 (47%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G     +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E +  E    +G L    +V +A G  + LAL+ Q     ++S G G  G
Sbjct: 61  NTKGQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSLALSDQGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+ + +L    +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSK----PEQIGALAGQHIVHVAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA   +    ++ G    G+LG G     +  P+ ++    + L  V  AAG  H+  + 
Sbjct: 152 LA---ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV--AAGGAHSFALS 206

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVSQIACGRH-----HTLAFVP 311

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 312 SSGMIYAFGCGTRGQLG 328



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG +  G+ P    +L G  I+  A G   ++ +SD GQ++++G  S G+   G+   + 
Sbjct: 66  LGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQL--GLTTIED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            VT P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 AVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L+ IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VKSLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATGDYTTF-VVSEDGDVYSFGCGESASLG 296
             +A G + T   V   G +Y+FGCG    LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL GI + Q AAG   +  +S +G V+ +GK+S G+   G+   +
Sbjct: 171 LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDER 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L++  VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVSQIACGRHHTLAFV--PSSGMIYAFGCGTRGQLGTGHTCNVKCP 338


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 28/344 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  E+   P  C      ++     G   T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-TEPNDVEPHPLL 148
             P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG   TE     P  + 
Sbjct: 73  KRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNI- 131

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQ 207
            +L +I +VQ+A GY + LAL+    G  V+S G    G+LG G    ++  P++I+   
Sbjct: 132 KSLSDIQIVQVACGYFHSLALS---KGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKS-- 186

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           LL +    +AAG  H+ V+   G V  WG  ++G LG  +E    VP ++++L   K ++
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVY 246

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           ++ G+  T  ++++G V++FG G    LGHN+ A     R    L   +VT         
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVT--------- 297

Query: 328 VQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 370
            QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 298 -QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGTTSNR 335



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 28/311 (9%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +G  SFG+   G    ++V  P+      N  V     G   T  +  +G VYT    + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LGH       E    +G L+   +V ++ G  + LAL  +     VY+ G  + G+LG
Sbjct: 64  GQLGHEKSRKRPEQ---VGALDAQNIVTVSCGEAHTLALNDKGQ---VYAWGFAVDGQLG 117

Query: 191 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 248
             G+    + PR I+   L ++Q V VA G +H+  + +   V +WG  +YG LG G E 
Sbjct: 118 LSGTEEYTRVPRNIK--SLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEY 175

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           + ++ P+++++L  +    +A G   +FV++  G V+ +G  +   LG N     + +R+
Sbjct: 176 KKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLN----DENDRY 231

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
                P L+ SL+  ++++V IS         HT ALT+ G ++ FGAG  GQLG    N
Sbjct: 232 ----VPNLLKSLR--SQKIVYISCGED-----HTAALTKEGGVFTFGAGGYGQLG---HN 277

Query: 369 NQTERGNPERV 379
           +     NP +V
Sbjct: 278 STAHEINPRKV 288



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 5/165 (3%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            +P   +SL GI   Q AAG   + +++ +G V+ +G++ FG+     +  + V  P L+
Sbjct: 179 ASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLL 236

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           +SL++  +V  + G   TA L++EG V+TF  G   +LGH++  +++ P  +   + NI 
Sbjct: 237 KSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI- 295

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           V QIA G  +  A    PS   +YS G G  G+LG G+ ++ K P
Sbjct: 296 VTQIACGRQHTSAFV--PSTGRIYSFGLGGNGQLGMGTTSNRKSP 338



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL+  +I+  + G   T  ++  G V+ FG   +G+   G   T    +P+ V 
Sbjct: 232 VPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTAHEINPRKVF 289

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            L    V Q A G   T A +   GR+Y+F  G + +LG  T  N   P P+ G
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 149/306 (48%), Gaps = 20/306 (6%)

Query: 38   PLYCRSLQG---IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            P    + QG    +++ +    G +M +++ G+V+++G   FG+  +G    +    P+ 
Sbjct: 3093 PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHG--NNERQRRPKQ 3150

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +E+L+   VVQ A G   +AV++ +G+++TF  G   RLG  +  N + P   +  LE  
Sbjct: 3151 IEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPE-RVAALEGY 3209

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V Q++ G  + L L+    GMAV++ G G  GKLG GS T + +P+ +EQ  L N    
Sbjct: 3210 HVGQVSCGLNHTLVLSLD--GMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ--LCNKGMK 3265

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             V  GA  + VV  DG V T+G  R   L     +  S P+VV +L  +    +A G   
Sbjct: 3266 KVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEH 3325

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLT 333
               +S  GDVY++GC     LG           H N V  P L+T+L+  N + +     
Sbjct: 3326 VLALSSTGDVYAWGCNSEGQLGLG---------HCNPVKEPTLITALQGKNIKQISAGRC 3376

Query: 334  NSIYWN 339
            +S  W 
Sbjct: 3377 HSSAWT 3382



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 23/300 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+ I+  G+V+++G   +G+  +G   T+    P++++  L +  
Sbjct: 464 RNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQ--KYPKIIQGPLFSKI 521

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 161
           VV A+ G   +A ++++G +YT+  G+  RLGH    +D +   +   +++I  V Q+A 
Sbjct: 522 VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGH----SDSQSRNMPTLVKDISGVGQVAC 577

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + +A+A    G  V+S G G  GKLGHG       P++IE      ++   V AG+ 
Sbjct: 578 GSSHTIAVA--QDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRK--VCAGSQ 633

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSE 280
            +  +   G+V  WG G   CLG G+ E  S+ P+ V+ L+  K I ++ GD     +S 
Sbjct: 634 SSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSH 691

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           + +VY++G   + ++G      GQG+    +  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 692 ENEVYAWG---NNTMGQC----GQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTA 744



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T  +S  G V A GK S+G    G    + +    ++E  +NI  V ++ G +  
Sbjct: 419 AGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGH 478

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T  ++ +G V+++  G   +LGH        P  + G L +  VV  +AGY +  A+   
Sbjct: 479 TLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVT-- 536

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGH        P L++    +      VA G+ H   V QDGR 
Sbjct: 537 -KDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG----QVACGSSHTIAVAQDGRT 591

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL+      V  G  ++  ++  G V+++GCG 
Sbjct: 592 VWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS 651

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
                      G G+     L P+ V  L     +++ IS  +S     H  AL+   ++
Sbjct: 652 CL---------GCGSSETTSLRPRFVEDLSIT--KIIDISCGDS-----HCLALSHENEV 695

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 696 YAWGNNTMGQCG 707



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 41/271 (15%)

Query: 120  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------- 171
            G+   + WGN  R G            L GT  N+ V  +A        + C        
Sbjct: 3018 GKSDVYLWGN-GRYGQ-----------LAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLI 3065

Query: 172  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDG 230
            Q +G+ V +VG G  G+LG G+  D   P +I  FQ   +  +V + G+  H+  + + G
Sbjct: 3066 QSNGV-VTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
             V +WG G +G LGHGN E +  PK ++AL     + +A G   + VV+ DG +++FG G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 291  ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG- 349
            ES  LG  +         +N + P+ V +L+  +   V   L        HT  L+  G 
Sbjct: 3185 ESGRLGQRST--------SNKMLPERVAALEGYHVGQVSCGLN-------HTLVLSLDGM 3229

Query: 350  KLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
             ++AFG GD G+LG     + T +  P++V+
Sbjct: 3230 AVWAFGDGDYGKLG---AGSSTAKYYPQKVE 3257



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 27/225 (12%)

Query: 149 GTLENIPVVQIAAGYCYLLAL-ACQPSGMAVYSVG----CGLG--GKLGHGSRTDEKHPR 201
           GTLE I + ++  G+     + A Q    +V + G    CG G  G+LG G   ++  P+
Sbjct: 397 GTLEKILLPKLTQGFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPK 456

Query: 202 LIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            +      N++ V  + G+  H   +  DG V +WG G YG LGHGN   +  PK++Q  
Sbjct: 457 KLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGP 516

Query: 261 NDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
              K +  A+  Y  +  V++DG++Y++G G+   LGH   +D Q         P LV  
Sbjct: 517 LFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGH---SDSQSRN-----MPTLVKD 568

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGDKGQLG 363
           +  V     Q++  +S     HT A+ + G+ +++FG GD G+LG
Sbjct: 569 ISGVG----QVACGSS-----HTIAVAQDGRTVWSFGGGDNGKLG 604



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 27/318 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   + LI   G V A G+  +G    G      V  P ++ + +   V Q     
Sbjct: 3054 QVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYV--PTIISAFQGYVVTQLVTSC 3111

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ+A G+ +  
Sbjct: 3112 GSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQI-EALQGEDVVQLACGFRHSA 3170

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    +   +++ G G  G+LG  S +++  P  +   +  ++  V  + G  H  V+ 
Sbjct: 3171 VVT---ADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQV--SCGLNHTLVLS 3225

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG G+   +  P+ V+ L +     V  G   + VV+ DG VY+
Sbjct: 3226 LDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYT 3285

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            FG  +   +G   + D      +N   PQ+V SL+ +    + +          H  AL+
Sbjct: 3286 FG--QERLIG---LPDSMLKNRSN---PQVVPSLEGLFIEDIAVGC-------EHVLALS 3330

Query: 347  ESGKLYAFGAGDKGQLGI 364
             +G +YA+G   +GQLG+
Sbjct: 3331 STGDVYAWGCNSEGQLGL 3348



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 17/160 (10%)

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCT---WGWGRYGCLGHGNEECESVPKVVQALNDV 263
           ++ NL    + + +  AA  G +G   T   WG      L  G  E   +PK+ Q  +D 
Sbjct: 355 EICNLASYCLCSSSTDAASPGTEGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDA 414

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           + I    G Y TF VS DG V + G G    L       G G+ +   L  +LV    + 
Sbjct: 415 QTIEA--GQYCTFSVSTDGSVKACGKGSYGRL-------GLGDSNNQSLPKKLVLEPHRN 465

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++V     ++S   + HT A+T  G+++++G G+ G+LG
Sbjct: 466 IKKV-----SSSKGSDGHTLAITVDGEVFSWGDGEYGKLG 500



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 15/143 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLV 95
           P    +L G  I +  AG+  ++ ++ AGQV+A+G  S      G  G+   TS  P+ V
Sbjct: 614 PKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRFV 668

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTL 151
           E L    ++  + G+     LS E  VY  +WGN+  +G     HT      P  +LG L
Sbjct: 669 EDLSITKIIDISCGDSHCLALSHENEVY--AWGNNT-MGQCGQGHTSTPITRPKKVLG-L 724

Query: 152 ENIPVVQIAAGYCYLLALACQPS 174
           E + + QI AG  + LA    P+
Sbjct: 725 EGVSIQQITAGTSHSLAWTAVPT 747


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 157/312 (50%), Gaps = 27/312 (8%)

Query: 42  RSLQGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVE 96
           R +  I+ +I  +     +  I + G++Y +G +  G+   G         ++ +PQLVE
Sbjct: 86  RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVE 145

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L N  V++ + G+F TA L+   + YT+  G   RLGH  + NDV    L+ +L  + V
Sbjct: 146 KLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGH-GDTNDVYTPKLIESLAGLSV 204

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             I  G  +   L    +   VY  G G  GKLG GS+ D   P+L+ Q  L N     V
Sbjct: 205 KNIVCGGHHTAILL---NNGKVYFCGGGAFGKLGFGSKEDIYIPKLL-QGSLTNKSIKEV 260

Query: 217 AAGAWHAAVVGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + G  H+AV+   G+V TWG G R G + +G E     PK+V+ LN + A++++ G   T
Sbjct: 261 SLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHT 320

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            V+S  GDVY++G   + +LGH  I D + N       P L   L+  N+ +VQ+S   +
Sbjct: 321 VVISNIGDVYAWGV--TRNLGHGVI-DSKPN------DPTLHPILQ--NKNIVQVSCGKT 369

Query: 336 IYWNAHTFALTE 347
                HT AL++
Sbjct: 370 -----HTIALSD 376



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 32/333 (9%)

Query: 32  REVNGTPLYCRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
            E N  P    SL    RI +   G   + +I+ +G++  +G    G+   G+   K + 
Sbjct: 26  EESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQ--LGLGDLKDIV 83

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEP 144
            P+++ S+KN  V+  +  +  +A +  +GR+YT+      +LG      +        P
Sbjct: 84  IPRVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTP 141

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L+  L N  V++++ G       AC       Y+ G G+ G+LGHG   D   P+LIE
Sbjct: 142 Q-LVEKLLNEKVIKVSCGS---FHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIE 197

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDV 263
               L+++ +V   G  H A++  +G+V   G G +G LG G++E   +PK++Q +L + 
Sbjct: 198 SLAGLSVKNIV--CGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNK 255

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V+ G   + V++  G VY++G G    LGH  I +G      ++L+P+LV  L  +
Sbjct: 256 SIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGH--IYNGP---EPDILSPKLVEKLNSI 308

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
               V IS  +S     HT  ++  G +YA+G 
Sbjct: 309 --IAVNISCGHS-----HTVVISNIGDVYAWGV 334



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 48/306 (15%)

Query: 75  SFGEAEYGVQGTKLVTS---PQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           ++G +EYG  G     S   P+L+ESL +   + +   G   +AV++  G +  + +G  
Sbjct: 12  AWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGC 71

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGC 183
            +LG             LG L++I + ++      ++ ++C     A       +Y+ GC
Sbjct: 72  GQLG-------------LGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGC 118

Query: 184 GLGGKLGHGSRTDEKH------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
              GKLG GS     +      P+L+E+  LLN + + V+ G++H A +    +  TWG 
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEK--LLNEKVIKVSCGSFHTACLTDLNKAYTWGL 176

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G  G LGHG+      PK++++L  +   ++  G + T ++  +G VY  G G    LG 
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF 236

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
            +  D        +  P+L+      N+ + ++SL        H+  +T  GK+Y +G G
Sbjct: 237 GSKED--------IYIPKLLQG-SLTNKSIKEVSLGYQ-----HSAVITTKGKVYTWGQG 282

Query: 358 DKGQLG 363
             G+LG
Sbjct: 283 --GRLG 286



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 18/134 (13%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 290
           V  WG   YG LG   EE    PK++++L     I  V  G + + V++  G++  +G G
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
               LG   + D        ++ P+++TS+K V    + +S ++      H+ A+ E G+
Sbjct: 70  GCGQLGLGDLKD--------IVIPRVMTSIKNV----INVSCSDR-----HSAAILEDGR 112

Query: 351 LYAFGAGDKGQLGI 364
           LY +G    G+LGI
Sbjct: 113 LYTWGCNKSGKLGI 126


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 27/354 (7%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N+++    L G ++   P+    +  +++ Q A G+     +S  G+V+A G+ + G  
Sbjct: 2428 LNDKDQLGGLKGSKIK-VPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRL 2486

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G      VT P+ +E+L +  V + ++  G      L+ EG+++++  G D +LGH  
Sbjct: 2487 GLGPLSAN-VTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGN 2545

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              N   P  L+ T ++  V  ++ G  +  A+    S   +Y+ G G  G+LGHG     
Sbjct: 2546 RMNCDHPK-LIDTFKSSCVRDMSCGSSHSAAIL---SSGELYTWGLGEYGRLGHGDNYTH 2601

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              P+ ++ F    +  +   +       +  DG V +WG G +G LG G  E  SVP  V
Sbjct: 2602 LKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            + L       VA G   +  +S  G V+++G G+   LGH       GN   +V  PQ+V
Sbjct: 2662 EKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH-------GN-DTHVRKPQIV 2713

Query: 318  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
              L+   +++V +++        H  A+T+SG+++A+G  D GQ G    NN T
Sbjct: 2714 DGLR--GKKIVDVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG----NNTT 2756



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 164/345 (47%), Gaps = 24/345 (6%)

Query: 21   NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
            N R    +L G +V   P    +L  IR +Q   G      ++  G+VYA          
Sbjct: 3362 NHRGQLGSLEGAKVK-LPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA--TGYGHGGR 3418

Query: 81   YGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
             G+ GT  VTS +++ESL+++ V + A+  G      LS +G VY++  G+D +LGH   
Sbjct: 3419 LGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNR 3478

Query: 139  PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
             N  +   ++  L    V+ I+ G  +    AC      +Y+ G G  G+LGHG   D+ 
Sbjct: 3479 -NSCDRPRVIEALRGKGVIDISCGGSHS---ACITQNHELYTWGKGRYGRLGHGDSEDQL 3534

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             P+++E  +   +  V   +G      +  D  V +WG G YG LG G  +   +P  V+
Sbjct: 3535 LPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVE 3594

Query: 259  ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            +L  +    V  G   +  ++  G VY++G G+   LGH            +V  P+ V 
Sbjct: 3595 SLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGV--------DDHVRRPKRVA 3646

Query: 319  SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +L+   ++V+ I+ T S+    H  A T++G++Y +G  D+GQLG
Sbjct: 3647 ALQ--GKKVITIA-TGSL----HCVASTDTGEVYTWGDNDEGQLG 3684



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 132/264 (50%), Gaps = 22/264 (8%)

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQI 159
           + VV    G  F A L+REG VY++  G+  +LGH  T P + EP  + G L    V++I
Sbjct: 18  VQVVTHTDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPRE-EPTLVTG-LAGKQVIRI 74

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           + G  +  A+    S   +Y+ G G  G+LGHGS  D+  P L+   +  ++  V   +G
Sbjct: 75  SCGSTHSAAVT---SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSG 131

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             H      DG V +WG G YG LG G  +    PK ++ L  +    V  G   +  ++
Sbjct: 132 DAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT 191

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            DG V+++G GE   LGH            +V  P+LV +L    + VV +S+      +
Sbjct: 192 RDGSVWTWGKGEGFRLGHGT--------EDHVRHPKLVEALD--GKHVVDVSVG-----S 236

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H  ALT++G++Y +G  D+GQLG
Sbjct: 237 IHCLALTDAGEVYCWGRNDQGQLG 260



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 6/237 (2%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           + ++  G+VY++G    G+  +G   T     P LV  L    V++ + G+  +A ++ E
Sbjct: 30  LALTREGEVYSWGSGDGGKLGHG--DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G +YT+  GN  RLGH +  + + P  L+  L    ++ +A G      LA    G  V+
Sbjct: 88  GELYTWGRGNYGRLGHGSSEDQLVP-VLVSGLRGHHIIDVACGSGDAHTLAAADDG-TVW 145

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           S G G  GKLG G     K+P+ IE+ Q L +    V  GA  +  + +DG V TWG G 
Sbjct: 146 SWGDGDYGKLGRGGSDGCKNPKSIERLQGLGV--CKVYCGAQFSLALTRDGSVWTWGKGE 203

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              LGHG E+    PK+V+AL+    + V+ G      +++ G+VY +G  +   LG
Sbjct: 204 GFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 24/297 (8%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            +R +   +G    M ++  G+++++G+   G+  +G +       P+L+++ K+  V   
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN--CDHPKLIDTFKSSCVRDM 2566

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAA 161
            + G+  +A +   G +YT+  G   RLGH     H +P  V+      +  +  V+ IA 
Sbjct: 2567 SCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQ------SFTSHRVIDIAC 2620

Query: 162  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
            G      LA    G  V+S G G  GKLG G       P  +E+ Q   +    VA GA 
Sbjct: 2621 GSRDAQTLALTDDG-TVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGV--CKVACGAQ 2677

Query: 222  HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
             +  +   G V TWG G Y  LGHGN+     P++V  L   K + VA G      V++ 
Sbjct: 2678 FSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDS 2737

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            G V+++G  +    G+N       NR      PQLV  L+      V    ++SI W
Sbjct: 2738 GQVFAWGDNDHGQQGNNTTT---VNRR-----PQLVNGLEGQKITRVACGSSHSIAW 2786



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 25/263 (9%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +G RN   R     P    +L+G  +I  + G   +  I+   ++Y +GK  +G   +G 
Sbjct: 3475 HGNRNSCDR-----PRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGD 3529

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTE--- 138
               +L+  P++VE+L+   V+  A G  +  T  L+ +  V+++  G+  +LG       
Sbjct: 3530 SEDQLL--PKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGC 3587

Query: 139  --PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
              P  VE      +L  + V ++  G  + +AL    SG AVY+ G G   +LGHG    
Sbjct: 3588 KIPMKVE------SLIGLGVSKVECGSQFSVALT--RSG-AVYTWGKGDYYRLGHGVDDH 3638

Query: 197  EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
             + P+ +   Q    + + +A G+ H       G V TWG    G LG G     + P++
Sbjct: 3639 VRRPKRVAALQ--GKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRL 3696

Query: 257  VQALNDVKAIHVATGDYTTFVVS 279
            V AL   K   VA G   T   S
Sbjct: 3697 VTALQGKKISRVACGSAHTIAWS 3719



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 8/168 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+    L+G  II  A G+G   T+  +D G V+++G   +G+   G  G+    +P+ +
Sbjct: 112 PVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGK--LGRGGSDGCKNPKSI 169

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E L+ + V +   G  F+  L+R+G V+T+  G   RLGH TE +   P  L+  L+   
Sbjct: 170 ERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPK-LVEALDGKH 228

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           VV ++ G  + LAL        VY  G    G+LG         P L+
Sbjct: 229 VVDVSVGSIHCLALT---DAGEVYCWGRNDQGQLGDIDCQIRPEPTLV 273



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 227  GQDG--RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            GQ+G  +V  WG      LG        VP + + +  +K   +A G  T F VS DG V
Sbjct: 2416 GQEGQIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKV 2475

Query: 285  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
              F CGES + G      G G   ANV  P+ + +L     R V +          H  A
Sbjct: 2476 --FACGESTN-GRL----GLGPLSANVTVPRQIENLSSFMVRKVSVHSGGR-----HAMA 2523

Query: 345  LTESGKLYAFGAGDKGQLG 363
            LT  GKL+++G G+ G+LG
Sbjct: 2524 LTIEGKLFSWGEGEDGKLG 2542



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVE 96
           P     LQG+ + +   GA  ++ ++  G V+ +GK   GE      GT+  V  P+LVE
Sbjct: 166 PKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGK---GEGFRLGHGTEDHVRHPKLVE 222

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
           +L    VV  ++G+     L+  G VY +   +  +LG       + P P L+  L +  
Sbjct: 223 ALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDID--CQIRPEPTLVSGLASKG 280

Query: 156 VVQIAAGYCYLLALAC 171
           +V IA G     A +C
Sbjct: 281 IVGIACGPAQSFAWSC 296


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 40/340 (11%)

Query: 45  QGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           Q IR+   A+G    RTML         +G  S G+         +V  PQ+   + +  
Sbjct: 63  QWIRLWTLASGLDSIRTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRS 114

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V + A G   +  L  +G VYT       +LGH  E N  E    +G L +  +V +A G
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACG 171

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGA 220
             + LAL+ +     ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G 
Sbjct: 172 ESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGN 225

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
           WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  +    VA G   +F +S
Sbjct: 226 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 285

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V+ +G   +  LG +   D +   H  +L  Q          +VV IS        
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ----------KVVYISCGEE---- 331

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 332 -HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 367



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 104 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 159

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 219

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 220 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 274

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 275 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 334

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 335 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 383

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 384 ----HTLAFVPSSGLIYAFGCGARGQLG 407



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 145 LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 202

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 203 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 262

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 263 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 315

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 316 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 375

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 376 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 407



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 250 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 307

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 308 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 367

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 368 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 423


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 150/326 (46%), Gaps = 39/326 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L+S  G+V+ +G+ S G   +G+   K VT PQL+ESL    V   A G F 
Sbjct: 283 ACGVRHAALVSRQGEVFTWGEASGGRLGHGM--GKDVTGPQLIESLAATSVDFVACGEFH 340

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH T+ +   P  + G LE +   QIA+  C    
Sbjct: 341 TCAVTMTGEIYT--WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL---QIASVSCGPWH 395

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG +    +PR +E   L  L+ + VA G WHAA + +
Sbjct: 396 TALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVES--LSGLRTIAVACGVWHAAAIVE 453

Query: 229 -----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
                       G++ TWG G    LGHG++E    P  V AL D     VA G   T  
Sbjct: 454 VIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVG 513

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           ++  G VY+ G      LG N  ADG+         P LV   K + + V +I+     Y
Sbjct: 514 LTTSGKVYTMGSTVYGQLG-NPNADGK--------LPCLVED-KLIKDCVEEIAC--GAY 561

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
              H   LT   +++ +G G  G+LG
Sbjct: 562 ---HVAVLTSRNEVFTWGKGANGRLG 584



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 139/285 (48%), Gaps = 33/285 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A++SR+G V+T+   +  RLGH     DV    L+ +L
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMG-KDVTGPQLIESL 326

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLL 209
               V  +A G  +  A+        +Y+ G G    G LGHG+      P+ I    L 
Sbjct: 327 AATSVDFVACGEFHTCAVTMTGE---IYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLE 382

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            LQ   V+ G WH A++   G++ T+G G +G LGHG++E    P+ V++L+ ++ I VA
Sbjct: 383 GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVA 442

Query: 270 TGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            G +    + E            G ++++G G+ + LGH       G++ +  L P  V+
Sbjct: 443 CGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGH-------GDKESR-LKPTCVS 494

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +L  ++    +++  +S+     T  LT SGK+Y  G+   GQLG
Sbjct: 495 AL--IDHTFHRVACGHSL-----TVGLTTSGKVYTMGSTVYGQLG 532



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 19/246 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  +FG   +G + T  V  P+ VESL  +  
Sbjct: 381 LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRT 438

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G +  A +              G+++T+  G+ +RLGH  + + ++P  +   ++
Sbjct: 439 IAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID 498

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   VY++G  + G+LG+ +  D K P L+E  +L+   
Sbjct: 499 HT-FHRVACGHSLTVGLT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLIKDC 552

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V  L +    ++A G 
Sbjct: 553 VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGS 612

Query: 273 YTTFVV 278
             T  +
Sbjct: 613 NFTAAI 618



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           GSR+D   P+ +E   +L++  +  A G  HAA+V + G V TWG    G LGHG  +  
Sbjct: 260 GSRSDVLIPKPLESNVVLDVHHI--ACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDV 317

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           + P+++++L       VA G++ T  V+  G++Y++G G      HNA   G G   ++ 
Sbjct: 318 TGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGT-----HNAGLLGHGTDVSHW 372

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  ++   L+      +QI+  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 373 IPKRISGPLEG-----LQIASVSCGPW--HTALITSTGQLFTFGDGTFGVLG 417


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 38/310 (12%)

Query: 56  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           AG   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V
Sbjct: 357 AGEAAMVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFV 412

Query: 116 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 168
           +S +G V     G+  RLG     N         EPH     ++ +   + + G+     
Sbjct: 413 ISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----T 465

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           LA    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +
Sbjct: 466 LAFTSEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSE 523

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 287
           DG + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SF
Sbjct: 524 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 581

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT 
Sbjct: 582 GGGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTS 626

Query: 348 SGKLYAFGAG 357
           +G++YA+G G
Sbjct: 627 TGQVYAWGCG 636



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  + I  V ++ G +  
Sbjct: 405 AGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGH 464

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A++  
Sbjct: 465 TLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS-- 522

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 523 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 577

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 636

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     RVV IS+ +S     H  AL+   ++
Sbjct: 637 -ACLGC-------GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEV 681

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 682 YAWGNNSMGQCG 693



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 450 RAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 507

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A +S +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 508 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 564

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 565 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 620

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 621 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD 678

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 679 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 730



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 147/326 (45%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQMVTSC 4073

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 4132

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    S   ++S G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4133 VVT---SDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALE--GHQVGQVACGLNHTLAVS 4187

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG+VY+
Sbjct: 4188 ADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYT 4247

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V +L  V    V +          HT  L+
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQVPALTGVFIEDVAVG-------AEHTLTLS 4292

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 26/206 (12%)

Query: 182  GCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWG 238
             CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG G
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 239  RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG ++SFG G+   L   
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRL--- 4151

Query: 299  AIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESG-KLYAFG 355
                G GN  +N   P+ V++L+  QV +    ++         HT A++  G  ++AFG
Sbjct: 4152 ----GLGNT-SNKKLPERVSALEGHQVGQVACGLN---------HTLAVSADGMTVWAFG 4197

Query: 356  AGDKGQLGIELVNNQTERGNPERVDI 381
             GD G+LG+    N T + +P++VD+
Sbjct: 4198 DGDYGKLGL---GNSTAKSSPQKVDV 4220



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +S+ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 503 LQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 558

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 559 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 617

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE  +L   + V ++ G  
Sbjct: 618 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIE--ELATTRVVDISIGDS 670

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 671 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 721



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4202 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRA 4261

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V +L  +F+   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 4262 RNH--NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVY--AWGSNSEGQLGLGHT---N 4314

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4315 HVREPTLISALQGKNIQQISAGRCHSAAWTAPP 4347



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G++++FG                         
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALE 4169

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4170 GHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4229

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  +
Sbjct: 4230 ACGTQFSVALTKDGNVYTF--GQDRLIGLPEGRARNHNRPQQVP------ALTGVFIEDV 4281

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + L L+   S   VY+ G    G+LG G     + P LI   Q  N+Q   ++AG
Sbjct: 4282 AVGAEHTLTLS---STGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQ--ISAG 4336

Query: 220  AWHAA 224
              H+A
Sbjct: 4337 RCHSA 4341



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 600 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 653

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    VV  +IG+     LS +  VY  +WGN++      G+ T P   +P  ++G 
Sbjct: 654 IEELATTRVVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG- 709

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 710 LDGVAIQQISAGTSHSLAWTALPRDRQV 737


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 155/337 (45%), Gaps = 32/337 (9%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R +   P  CR +    I + A G   ++ + + G+VY  G +S G+  +  +G K    
Sbjct: 19  RGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNK---- 74

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ + +L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQ 207
               ++Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L       VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++
Sbjct: 192 LAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           ++ G+  T V+++ G V++FG G    LGH ++ D    R            L+ +   V
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV----------LELMGSEV 296

Query: 328 VQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
            QI+         HT A    SG +YAFG G +GQLG
Sbjct: 297 TQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT    +  +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG   +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPRRV 288



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           +  +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 VR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGHG+   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ--LGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  CR +    I + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA        ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 194

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 195 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----------LELMGSEVTQIACG 302

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT AL   SG +YAFG G KGQLG
Sbjct: 303 RQ-----HTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  + + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  ++ +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + VN++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSVNDEV---NPRRV 288



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T  +V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LAL   PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVTQIACGRQHTLALV--PSSGLIYAFGCGAKGQLGTGHTCNVKCP 338


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 159/342 (46%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q + G     L++  G+V+ +G++S G   +G++     T P+LVE
Sbjct: 255 TPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH--FTHPKLVE 312

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
           SL    +   A G + T  +S  G ++T  WG    N   LGH T+ +   P  + G LE
Sbjct: 313 SLAVTNIDYVACGEYHTCAISTSGDLFT--WGDGSNNSGLLGHGTDVSHWIPKRVSGPLE 370

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + V+ IA G  +  ALA   S   +++ G G  G LGHG R     P+   + Q LN L
Sbjct: 371 GLQVLSIACG-TWHSALAT--SNGKLFTFGDGTFGALGHGDRKSVSSPK---ELQSLNGL 424

Query: 212 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + + VA G WH A    V+ Q G      ++ TWG G    LGHGN++   +P  V +L 
Sbjct: 425 KTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLI 484

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           D     +A G   T  ++  G V++ G      L         GN  +N   P LV   +
Sbjct: 485 DYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQL---------GNPSSNGKIPCLVQD-R 534

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V E V +IS     Y   HT  LT   +++ +G G  GQLG
Sbjct: 535 LVGEFVEEISC--GAY---HTAVLTSRSEVFTWGRGANGQLG 571



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 147/287 (51%), Gaps = 32/287 (11%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +ES   + V Q + G    A+++R+G V+T  WG ++  RLGH  E +   P  
Sbjct: 253 VLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFT--WGEESGGRLGHGIEDHFTHPK- 309

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+ +L    +  +A G  +  A++     +  +  G    G LGHG+      P+ +   
Sbjct: 310 LVESLAVTNIDYVACGEYHTCAISTS-GDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSG- 367

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  LQ + +A G WH+A+   +G++ T+G G +G LGHG+ +  S PK +Q+LN +K I
Sbjct: 368 PLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTI 427

Query: 267 HVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            VA G + T     V+S+ G       ++++G G+   LGH       GN+ A +L P  
Sbjct: 428 KVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGH-------GNKDAYLL-PTC 479

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V+SL   N    Q++  +++     T ALT SG ++  G    GQLG
Sbjct: 480 VSSLIDYN--FQQLACGHTM-----TVALTTSGHVFTMGGSAYGQLG 519



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 134/245 (54%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G +  K V+SP+ ++SL  +  
Sbjct: 369 LEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDR--KSVSSPKELQSLNGLKT 426

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + TA    V+S+ G      +++T+  G+  RLGH  +   + P   + +L +
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPT-CVSSLID 485

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +AL    SG  V+++G    G+LG+ S ++ K P L+ Q +L+    
Sbjct: 486 YNFQQLACGHTMTVALTT--SGH-VFTMGGSAYGQLGNPS-SNGKIPCLV-QDRLVGEFV 540

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ GA+H AV+     V TWG G  G LGHG+ E   +P +V+AL +    +++ G +
Sbjct: 541 EEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGAN 600

Query: 273 YTTFV 277
           +T+ +
Sbjct: 601 FTSSI 605



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 33/300 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-------KLVT 90
           P    SL    I   A G   T  IS +G ++ +G  S      G  GT       K V+
Sbjct: 308 PKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLG-HGTDVSHWIPKRVS 366

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            P     L+ + V+  A G + +A+ +  G+++TF  G    LGH    +   P  L  +
Sbjct: 367 GP-----LEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKEL-QS 420

Query: 151 LENIPVVQIAAGYCYLLALA-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           L  +  +++A G  +  A+           S   +++ G G   +LGHG++     P  +
Sbjct: 421 LNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCV 480

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALND 262
                 N Q   +A G      +   G V T G   YG LG+ +   + +P +VQ  L  
Sbjct: 481 SSLIDYNFQ--QLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGK-IPCLVQDRLVG 537

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                ++ G Y T V++   +V+++G G +  LGH    D +         P LV +LK+
Sbjct: 538 EFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRK--------LPTLVEALKE 589


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 156/340 (45%), Gaps = 38/340 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL  + + Q A G   T L++  G+V+++G++S G   +GV     V  PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 155
           L +  V   A G + +  +++ G +YT+  G  N   LGH    +   P  + G LE + 
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR 231

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A G  + + +    S   ++S G G  G LGHG R     PR +E   L  L+ + 
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286

Query: 216 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            A G WH A V +             G++ TWG G    LGHG++E + VP  V AL D 
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               VA G   T  ++  G +Y+ G     S+ +  + D Q        T +L   L+  
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              + ++S     Y   H  ALT  G +  +G G  G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 22/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+R+   A G   T+L++  GQ+++FG  +FG   +G +  K  + P+ VESLK +  
Sbjct: 227 LEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKT 284

Query: 104 VQAAIGNFFTA----VLSR--------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++AA G + TA    V+SR         G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 285 LRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAAL 343

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL    +   +Y++G    G+LG    T     RL    +L   
Sbjct: 344 VDHNFRQVACGHSLTVALT---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRT 396

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               V+ GA+H A +   G VCTWG G  G LGHG+ E   VP +V+AL D +   V+ G
Sbjct: 397 LIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCG 456

Query: 272 DYTTFVV 278
              T  +
Sbjct: 457 SSFTSAI 463



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 17/189 (8%)

Query: 178 VYSVGCGLGG---KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           ++  G G GG   KL    RTD   PR +    +L++Q   +A G  H A+V + G V +
Sbjct: 89  MWGEGIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHTALVTRQGEVFS 146

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG    G LGHG +   + P+++ +L      +VA G+Y +  V++ GD+Y++G G    
Sbjct: 147 WGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT--- 203

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
             HN    G GN  ++  TP+ V    +     V++S      W  HT  +T +G+L++F
Sbjct: 204 --HNFGLLGHGNSISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSF 254

Query: 355 GAGDKGQLG 363
           G G  G LG
Sbjct: 255 GDGTFGVLG 263


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 41/306 (13%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I + G V+ FGK  FG+           T+   + S K   V   A G+  T V++  GR
Sbjct: 8   IPETGAVFTFGKSRFGDNR---------TNKFWIRSDK---VTDIACGDEHTVVVTENGR 55

Query: 122 VYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
           ++TF    WG   +LG  +     +P   +  L+   +  +AAG  + LA+        +
Sbjct: 56  LFTFGNNEWG---QLGIGSNKTRNKP-TTVKALKPEKITHVAAGRFHTLAVT---DSNKL 108

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           YS G G  G LGHG  TD   P  IE  +  ++   ++A G +H+A + ++G +  WG  
Sbjct: 109 YSFGQGSEGALGHGDETDLNMPTSIESLEDKDVN--IIACGGYHSAAITKNGELYIWGSN 166

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LG  N+   S P ++     V  I VA G Y T VV+ DG +Y+FG  E   LG  
Sbjct: 167 SEGQLGLKNDTI-SYPTMLDLGKSV--ISVACGYYHTAVVTADGKLYTFGETEGGKLG-- 221

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            + D + ++   V  P++V   K ++ +VV+++   +     HT ALT SG++Y FG+G 
Sbjct: 222 -LGDIEAHK---VTKPKVV---KGISGKVVKVACGGN-----HTVALTASGQVYTFGSGQ 269

Query: 359 KGQLGI 364
            GQLG+
Sbjct: 270 NGQLGL 275



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 28/322 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++  ++   A G   T+++++ G+++ FG + +G+   G+   K    P  V++LK   +
Sbjct: 32  IRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQ--LGIGSNKTRNKPTTVKALKPEKI 89

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
              A G F T  ++   ++Y+F  G++  LGH  E  D+     + +LE+  V  IA G 
Sbjct: 90  THVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDE-TDLNMPTSIESLEDKDVNIIACGG 148

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +  A+        +Y  G    G+LG  + T   +P +++    L    + VA G +H 
Sbjct: 149 YHSAAIT---KNGELYIWGSNSEGQLGLKNDTIS-YPTMLD----LGKSVISVACGYYHT 200

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSED 281
           AVV  DG++ T+G    G LG G+ E   V  PKVV+ ++  K + VA G   T  ++  
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTAS 259

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G VY+FG G++  LG        G++  +   P+LV +L +   ++  I+   S     H
Sbjct: 260 GQVYTFGSGQNGQLG-------LGSKIMDSNIPKLVEALSK--RKIKHIACGES-----H 305

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T  +++ G+L+ FG G  G+LG
Sbjct: 306 TAVVSDKGELFTFGDGRHGKLG 327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 23/289 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+  +I   AAG   T+ ++D+ ++Y+FG+ S G   +G +    +  P  +ES
Sbjct: 78  PTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETD--LNMPTSIES 135

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  V   A G + +A +++ G +Y +   ++ +LG     ND   +P +  L    V+
Sbjct: 136 LEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---KNDTISYPTMLDL-GKSVI 191

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVV 215
            +A GY +   +        +Y+ G   GGKLG G     K   P++++    ++ + V 
Sbjct: 192 SVACGYYHTAVVTADGK---LYTFGETEGGKLGLGDIEAHKVTKPKVVKG---ISGKVVK 245

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYT 274
           VA G  H   +   G+V T+G G+ G LG G++  +S +PK+V+AL+  K  H+A G+  
Sbjct: 246 VACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESH 305

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH-ANVLTPQLVTSLKQ 322
           T VVS+ G++++FG G    L       GQG+   +N+  P  V  LK+
Sbjct: 306 TAVVSDKGELFTFGDGRHGKL-------GQGDESFSNLFKPVKVQRLKE 347



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 15/161 (9%)

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
           +F + + +   +A G  H  VV ++GR+ T+G   +G LG G+ +  + P  V+AL   K
Sbjct: 29  KFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEK 88

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
             HVA G + T  V++   +YSFG G   +LGH    D             + TS++ + 
Sbjct: 89  ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETD-----------LNMPTSIESLE 137

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           ++ V I          H+ A+T++G+LY +G+  +GQLG++
Sbjct: 138 DKDVNIIACGGY----HSAAITKNGELYIWGSNSEGQLGLK 174


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 158/357 (44%), Gaps = 55/357 (15%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK---DSFGEAEYGVQGTKLVTSPQL 94
           P   R L  +++I  ++G   + L+++ G+++  G    D  G  E    G+K    P  
Sbjct: 108 PERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLG-LEGITTGSKKTFKP-- 164

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG---NDARLGHHTEPNDVEPHP--LLG 149
           VE L  IF+ Q A G++ T  LS+EG+VY   WG   ++ R     E  D   +   LL 
Sbjct: 165 VELLTQIFIKQVACGDYHTLALSKEGQVYV--WGGSLHNKRGDRSQERKDNAKYKPVLLQ 222

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +     + QI  G  + LAL        +YS G G  G+ GHG   D++ P+ I+ F   
Sbjct: 223 SFAGKKIKQIDCGDFHSLAL---DDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGK 279

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ---------AL 260
            +    + AG  H   +  D +V  WG GRYG  G G  E  ++P++V           L
Sbjct: 280 II--TQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYL 337

Query: 261 NDV-------------KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
           +D              K   +A G+  T V++  G ++SFG  +   LGHN +       
Sbjct: 338 DDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTV------- 390

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             N   P+LV  +  +N + VQ++   +     H+  LT    +YA G    GQ G+
Sbjct: 391 -DNYCRPKLVEGM--LNHKTVQVAAGRN-----HSLCLTNKNDVYACGNNQYGQCGL 439



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 41/325 (12%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V++FG+++ GE   G      V  P+ V  L  + V+  + G   + +++ +G+++    
Sbjct: 86  VWSFGQNTKGEL--GTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143

Query: 128 GNDARLGHHT----EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
               +LG            +P  LL     I + Q+A G  + LAL+ +     VY  G 
Sbjct: 144 NLHDKLGLEGITTGSKKTFKPVELL---TQIFIKQVACGDYHTLALSKEGQ---VYVWGG 197

Query: 184 GLGGKLGHGS--RTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
            L  K G  S  R D  +  P L++ F    ++ +    G +H+  +  +G + +WG G 
Sbjct: 198 SLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI--DCGDFHSLALDDNGTLYSWGVGE 255

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G  GHG  E +  P+ ++  +      +  G++ T  ++ D  VY++G G     G   
Sbjct: 256 KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGE 315

Query: 300 IADGQGNRHANVLTPQLVTSLKQ----------VNERVVQI-----SLTNSIYWNAHTFA 344
                     N   PQLV    Q          V + +++       +        HT  
Sbjct: 316 FE--------NTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLV 367

Query: 345 LTESGKLYAFGAGDKGQLGIELVNN 369
           LT SG++++FG   +GQLG   V+N
Sbjct: 368 LTSSGQIFSFGYNQQGQLGHNTVDN 392



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 34/268 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  +S  G +I Q   G   ++ + D G +Y++G    GE  +G    +   +PQ ++ 
Sbjct: 218 PVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQ--ETPQRIKF 275

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG----------------------- 134
                + Q   GN  T  ++ + +VY  +WG D R G                       
Sbjct: 276 FDGKIITQIEAGNHHTLAITADNQVY--AWG-DGRYGQCGFGEFENTAIPQLVNFPSQGN 332

Query: 135 HHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           + +  +D     +L   ++ P + QIAAG  + L L    S   ++S G    G+LGH +
Sbjct: 333 NTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLT---SSGQIFSFGYNQQGQLGHNT 389

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
             +   P+L+E   +LN + V VAAG  H+  +     V   G  +YG  G  + E    
Sbjct: 390 VDNYCRPKLVEG--MLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKT 447

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSED 281
              V +L  V +  +  G + ++VV ++
Sbjct: 448 FSHVLSLLSVNSFKLYAGGFHSWVVLDE 475



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGT---KL 88
           E   TP   +   G  I Q  AG   T+ I+   QVYA+G   +G+  +G  + T   +L
Sbjct: 265 EDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQL 324

Query: 89  VTSP---------------QLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           V  P               +++E  K+   + Q A G   T VL+  G++++F +    +
Sbjct: 325 VNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQ 384

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LGH+T  N   P  + G L N   VQ+AAG  + L   C  +   VY+ G    G+ G  
Sbjct: 385 LGHNTVDNYCRPKLVEGML-NHKTVQVAAGRNHSL---CLTNKNDVYACGNNQYGQCGLP 440

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            R  E          LL++    + AG +H+ VV
Sbjct: 441 DR--EMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 49/260 (18%)

Query: 123 YTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM-- 176
           Y +S+G + +     GH+ E   + P  + G L  + V+ +++G         + SG+  
Sbjct: 85  YVWSFGQNTKGELGTGHYNEV--LMPERVRG-LPKLKVIFLSSG--------GKHSGLVT 133

Query: 177 ---AVYSVGCGLGGKLG-----HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
               ++  G  L  KLG      GS+   K   L+ Q  +       VA G +H   + +
Sbjct: 134 EDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQ-----VACGDYHTLALSK 188

Query: 229 DGRVCTWGWGRYGCLGHGNEE----CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           +G+V  WG   +   G  ++E     +  P ++Q+    K   +  GD+ +  + ++G +
Sbjct: 189 EGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTL 248

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           YS+G GE    GH    D +  +       +++T ++  N                HT A
Sbjct: 249 YSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNH---------------HTLA 293

Query: 345 LTESGKLYAFGAGDKGQLGI 364
           +T   ++YA+G G  GQ G 
Sbjct: 294 ITADNQVYAWGDGRYGQCGF 313


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
           niloticus]
          Length = 4936

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G T ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 370 GETPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLASSFADAQTIEA--GQYCTFVI 425

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH     ++ +   + + G+     L
Sbjct: 426 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----TL 478

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 479 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSED 536

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 537 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 594

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 595 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 639

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 640 GQVYAWGCG 648



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  + I  V ++ G +  
Sbjct: 417 AGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGH 476

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A++  
Sbjct: 477 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS-- 534

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 535 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 589

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 590 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 648

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     RVV IS+ +S     H  AL+   ++
Sbjct: 649 -ACLGC-------GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEV 693

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 694 YAWGNNSMGQCG 705



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 462 RAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 519

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A +S +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 520 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 576

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 577 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 632

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 633 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD 690

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 691 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 742



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4150 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4207

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   V Q+
Sbjct: 4208 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQV 4266

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + L ++    GM V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4267 ACGLNHTLVVSAD--GMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4322

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG+V T+G  R   L  G     + P+ V  L+ +    VA G   T V+S
Sbjct: 4323 TQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLS 4382

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT+L+  N   +     +S  W
Sbjct: 4383 STGDVYTWGSNSEGQLGLG---------HTNHVREPTLVTTLQGKNIHQISAGRCHSAAW 4433

Query: 339  NA 340
             A
Sbjct: 4434 TA 4435



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 29/239 (12%)

Query: 153  NIPVVQIAAGYCYLLALAC--------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            NI V  IA  +     + C        QP+G  V + G G  G+LG G+  D     +I 
Sbjct: 4091 NILVPTIAPSFSQAQQVVCGQNCTFVIQPNG-TVLACGEGSYGRLGQGNSDDLHVLTVIS 4149

Query: 205  QFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              Q   +  +V + G+  H+  + + G V +WG G YG LGHGN + +  P+ ++AL   
Sbjct: 4150 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4209

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
            + + ++ G   + VV+ DG +++FG G+   L       G GN  +N   P+ VT+L+  
Sbjct: 4210 EVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-------GLGNT-SNKKLPEKVTALEGY 4261

Query: 324  NERVVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            +   V   L        HT  ++  G + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4262 HVGQVACGLN-------HTLVVSADGMMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4310



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4163

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4164 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4221

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   +   +++ G G  G+LG G+ +++K P  +   +  ++  V  A G  H  VV 
Sbjct: 4222 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQV--ACGLNHTLVVS 4277

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG V++
Sbjct: 4278 ADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFT 4337

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            FG  +   +G   + +G+   H     PQ V  L  ++ + V +          HT  L+
Sbjct: 4338 FG--QDRLIG---LPEGRARNHNR---PQQVPGLSGIHIQDVAVG-------AEHTLVLS 4382

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +Y +G+  +GQLG+   N+  E
Sbjct: 4383 STGDVYTWGSNSEGQLGLGHTNHVRE 4408



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +S+ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 515 LQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 570

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 571 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 629

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE  +L   + V ++ G  
Sbjct: 630 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIE--ELATTRVVDISIGDS 682

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 683 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 10/231 (4%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4200 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PEKVTA 4257

Query: 98   LKNIFVVQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   V Q A G   T V+S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4258 LEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGI 4316

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        V++ G      L  G   +   P+ +     +++Q V V
Sbjct: 4317 KKVACGTQFSVALT---KDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAV 4373

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
              GA H  V+   G V TWG    G LG G+      P +V  L   K IH
Sbjct: 4374 --GAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQG-KNIH 4421



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 5/142 (3%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G+V+ FG+D       G  
Sbjct: 4292 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRA 4351

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVE 143
                   PQ V  L  I +   A+G   T VLS  G VYT+   ++ +LG  HT  N V 
Sbjct: 4352 RNH--NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHT--NHVR 4407

Query: 144  PHPLLGTLENIPVVQIAAGYCY 165
               L+ TL+   + QI+AG C+
Sbjct: 4408 EPTLVTTLQGKNIHQISAGRCH 4429



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 612 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 665

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    VV  +IG+     LS +  VY  +WGN++      G+ T P   +P  ++G 
Sbjct: 666 IEELATTRVVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVIG- 721

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 722 LDGVAIQQISAGTSHSLAWTALPRDRQV 749


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G T ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4184

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4185 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4244

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4245 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4296

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4297 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4351

Query: 220  AWHAA 224
              H+A
Sbjct: 4352 RCHSA 4356



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +    I +AA GA  T+L+++ G++Y+ G +  G+  + V+       PQL+ +L+N  +
Sbjct: 344 MHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLP-NKRPQLLTALENYII 402

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            QA  G   +  L+  G+VY  SWG++A  +LG  T+        L+ ++    VVQIAA
Sbjct: 403 TQACCGTAHSLALTNWGQVY--SWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAA 460

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAG 219
           G+ + LAL    +   +Y+ G    G+LG G  T+EK   P L++   L  +    +A G
Sbjct: 461 GHYHCLALT---NSGELYAWGSNAYGQLGLG-MTNEKVSTPTLVQS--LAGVPIAFIACG 514

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             H+  V + G +  WG   +G LG  +      P  ++ L  +   +V+ GD  +  ++
Sbjct: 515 GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLT 574

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V++ G G    LGH     G  N   N + P++V  L  +  ++ QI+        
Sbjct: 575 AGGGVFTCGAGTFGQLGH-----GSCN---NEILPRMVFEL--MGSKITQIACGRR---- 620

Query: 340 AHTFALTES-GKLYAFGAGDKGQLGIELVNN 369
            HT A   S GK+Y FG    GQLGI +V N
Sbjct: 621 -HTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 22/285 (7%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  P+ ++ +    + +AA G   T +L+ +G++Y+    +  +LGH  E    +   L
Sbjct: 334 MVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQL 393

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 206
           L  LEN  + Q   G  + LAL    +   VYS G    G+LG  + T  +  PRLI   
Sbjct: 394 LTALENYIITQACCGTAHSLALT---NWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR-- 448

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA 265
            +   Q V +AAG +H   +   G +  WG   YG LG G   E  S P +VQ+L  V  
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPI 508

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
             +A G   +F VS+ G ++ +G      LG N +   Q         P  + +L+ +  
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ--------FPTQLRTLRSLGV 560

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           R V      S++       LT  G ++  GAG  GQLG    NN+
Sbjct: 561 RYVSCGDDFSVF-------LTAGGGVFTCGAGTFGQLGHGSCNNE 598



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 16/236 (6%)

Query: 30  LGREVNGT----PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           LG+E + T    P   RS+   +++Q AAG    + ++++G++YA+G +++G+   G+  
Sbjct: 432 LGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTN 491

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE 143
            K V++P LV+SL  + +   A G   +  +S+ G +  F WG +   +LG + + N  +
Sbjct: 492 EK-VSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLN-DLNSRQ 547

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
               L TL ++ V  ++ G  + + L    +G  V++ G G  G+LGHGS  +E  PR++
Sbjct: 548 FPTQLRTLRSLGVRYVSCGDDFSVFLT---AGGGVFTCGAGTFGQLGHGSCNNEILPRMV 604

Query: 204 EQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             F+L+  +   +A G  H  A V   G++  +G    G LG G     + P++V+
Sbjct: 605 --FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVR 658


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 144/328 (43%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+++ +G++S G   +GV     V  P+LV++L N  +   + G + 
Sbjct: 314 ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSD--VLQPKLVDALGNTNIELVSCGEYH 371

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  E +   P  + G LE I V  IA G  +   
Sbjct: 372 TCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAV 429

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 430 VT---SAGQLFTFGDGTFGVLGHGDRGSVTMPREVE--SLKGLRTVRAACGVWHTAAVVE 484

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V AL D     V+ G   T 
Sbjct: 485 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTV 544

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      L         GN HA+   P  V       E  +  S    I
Sbjct: 545 ALTTSGHVYTMGSPVYGQL---------GNPHADGKVPVRV-------EGKLSKSFVEEI 588

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 589 ACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   A G   T +++ AGQ++ FG  +FG   +G +G+  VT P+ VESLK +  
Sbjct: 412 LEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRT 469

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 470 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP-TCVAAL 528

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +++ G+   +AL    +   VY++G  + G+LG+    D K P  +E  +L   
Sbjct: 529 VDPNFCRVSCGHSMTVALT---TSGHVYTMGSPVYGQLGN-PHADGKVPVRVEG-KLSKS 583

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 584 FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACG 643

Query: 272 DYTTFVV 278
              T  +
Sbjct: 644 TNFTAAI 650



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 42/309 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G    A+++++G ++T  WG ++  RLGH  + + ++P  L+ 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFT--WGEESGGRLGHGVDSDVLQPK-LVD 355

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            L N  +  ++ G  +  A+    SG  +Y+ G G    G LGHG+      P+ I    
Sbjct: 356 ALGNTNIELVSCGEYHTCAVTL--SG-DLYTWGDGTYNFGLLGHGNEVSHWIPKKING-P 411

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  +    +A G WH AVV   G++ T+G G +G LGHG+    ++P+ V++L  ++ + 
Sbjct: 412 LEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVR 471

Query: 268 VATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            A G + T  V E             G ++++G G+   LGH       G++    L P 
Sbjct: 472 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKETK-LVPT 523

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V +L  V+    ++S  +S+     T ALT SG +Y  G+   GQLG    N   +   
Sbjct: 524 CVAAL--VDPNFCRVSCGHSM-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKV 572

Query: 376 PERVDIDLS 384
           P RV+  LS
Sbjct: 573 PVRVEGKLS 581



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 14/170 (8%)

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           + D   P+ +E   +L++Q +  A G  HAA+V + G + TWG    G LGHG +     
Sbjct: 293 KMDSLLPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQ 350

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           PK+V AL +     V+ G+Y T  V+  GD+Y++G G      +N    G GN  ++ + 
Sbjct: 351 PKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGT-----YNFGLLGHGNEVSHWIP 405

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  K++N  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 406 -------KKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLG 448


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 33/339 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  A+G   T+ ++   +VY+ G + FG+   G Q ++    P LV       +   A 
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAA 88

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+FF+  ++  G +  F WG         + + +    LL  + +  VVQ+A G  + +A
Sbjct: 89  GDFFSIAIAESGLL--FGWGRSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 226
           L  + +   + S G    G+LG GS   E   P +I     LN  P+  + AGA+H+ V+
Sbjct: 147 LTEEGT---ILSWGSNTQGQLGLGSSEIEFLEPTIIAS---LNAFPISQICAGAYHSGVL 200

Query: 227 GQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
              G + TWG   +G LGHGN +  +S P++V+ L   + + VA G+  +   + +G V+
Sbjct: 201 SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           S+G G +  LGHN++        ANV  P+ +  L  +   V QI          HT +L
Sbjct: 261 SWGHGGNGQLGHNSM--------ANVTQPKKIMEL--MGTTVCQICCGRR-----HTISL 305

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           T+  KL  FG     QLG    +N T    P  + I L+
Sbjct: 306 TDKRKLLGFGLNSNNQLG---THNDTSARLPITIPISLT 341



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 5/196 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL    I Q  AGA  + ++S +G ++ +GK+++G+  +G       +SP+LV++
Sbjct: 176 PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKT 234

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  VV  A+G   +   +R G V+++  G + +LGH++  N  +P  ++  L    V 
Sbjct: 235 LRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVC 293

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QI  G  + ++L        +   G     +LG  + T  + P  I      + Q   +A
Sbjct: 294 QICCGRRHTISLT---DKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIA 350

Query: 218 AGAWHAAVVGQDGRVC 233
           AG   +    Q+   C
Sbjct: 351 AGGDQSFSGSQNESSC 366



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N   + +A+G  H   +    +V + G   +G LG    +C   P +V      +  HVA
Sbjct: 30  NQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCR--PSLVTGFGAEEIFHVA 87

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            GD+ +  ++E G +  FG G S    +  +   Q + H     P+L+   K ++  VVQ
Sbjct: 88  AGDFFSIAIAESGLL--FGWGRSL---NGELMCKQDSLHE----PKLLD--KIMHWSVVQ 136

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           ++         H  ALTE G + ++G+  +GQLG+
Sbjct: 137 VACGAQ-----HCIALTEEGTILSWGSNTQGQLGL 166


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G T ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4070 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4127

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4128 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4186

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4187 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4242

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4243 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4302

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4303 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4353

Query: 339  NA 340
             A
Sbjct: 4354 TA 4355



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4044 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4103

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4104 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4161

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4162 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4208

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4209 GDYGKLGL---GNSTAKSSPQKVDV 4230



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4083

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4084 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4141

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4142 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4197

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4198 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4257

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4258 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4302

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4303 STGDVYAWGSNSEGQLGLGHTNHVRE 4328



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4120 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4179

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4180 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4239

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4240 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4291

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4292 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4346

Query: 220  AWHAA 224
              H+A
Sbjct: 4347 RCHSA 4351



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4271

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4272 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4324

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4325 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4357


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 29/330 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +   + G+  ++ I   G V ++G+   G+  +G     L  +P+ + +L +  +     
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL--APKAISTLTDAGIESVVC 72

Query: 109 GNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYL 166
           G  +T AV    G+VY++ WG+  RLGH  + NDV  P P+       PV ++A G  + 
Sbjct: 73  GAEYTIAVAPSRGQVYSWGWGDFGRLGH-GDCNDVFVPRPIE-FFSGRPVHRVACGDTHT 130

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L +A +     +++ G    G+LG G   D   P+L+   Q   ++ V  A G+ H+   
Sbjct: 131 LVVAGEGE---LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV--ACGSEHSLAA 185

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            + G V +WGWGRYG LG G  +   +P  V  L  ++ +    G   + VVSEDG V++
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFT 245

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   LGH          H +   P  V +L+    R+  ++      W  HT A  
Sbjct: 246 FGWSKYGQLGH--------GDHTDRTVPCQVAALRHT--RISSVAGG----WR-HTMAAD 290

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
            SG LY +G    GQLG+    + ++R +P
Sbjct: 291 SSGNLYGWGWNKFGQLGL---GDSSDRPSP 317



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 153/328 (46%), Gaps = 25/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +L    I     GA  T+ ++ + GQVY++G   FG   +G      V  P+ +E
Sbjct: 56  PKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFV--PRPIE 113

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIP 155
                 V + A G+  T V++ EG ++TF    + +LG  HT  ND     L+  L+   
Sbjct: 114 FFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHT--NDCLSPQLVVALQGER 171

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A G  +  +LA   SG  V+S G G  G LG G   D   P  +    L  ++ V 
Sbjct: 172 VRSVACGSEH--SLAATESGT-VFSWGWGRYGNLGDGESQDRYLPTRV--VGLEGIRMVS 226

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              G  H+AVV +DGRV T+GW +YG LGHG+    +VP  V AL   +   VA G   T
Sbjct: 227 AECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHT 286

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
                 G++Y +G  +   LG    +D    R + VL    +   +        +SL   
Sbjct: 287 MAADSSGNLYGWGWNKFGQLGLGDSSD----RPSPVLVGGALAGQR--------VSLVTC 334

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +   HT A+TE G++Y++G G  GQLG
Sbjct: 335 GW--RHTVAVTEGGRVYSWGRGVNGQLG 360



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 11/261 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
             G  + + A G   T++++  G+++ FG++  G+   G+  T    SPQLV +L+   V
Sbjct: 115 FSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQ--LGLGHTNDCLSPQLVVALQGERV 172

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
              A G+  +   +  G V+++ WG    LG     +   P  ++G LE I +V    G+
Sbjct: 173 RSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGW 231

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-H 222
            +   ++       V++ G    G+LGHG  TD   P  +   +   +  V   AG W H
Sbjct: 232 RHSAVVS---EDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV---AGGWRH 285

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSED 281
                  G +  WGW ++G LG G+      P +V  AL   +   V  G   T  V+E 
Sbjct: 286 TMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEG 345

Query: 282 GDVYSFGCGESASLGHNAIAD 302
           G VYS+G G +  LGH A  D
Sbjct: 346 GRVYSWGRGVNGQLGHGAEQD 366



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 7/213 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    +LQG R+   A G+  ++  +++G V+++G   +G    G    + +  P  V 
Sbjct: 160 SPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYL--PTRVV 217

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+ I +V A  G   +AV+S +GRV+TF W    +LGH    +   P   +  L +  +
Sbjct: 218 GLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVP-CQVAALRHTRI 276

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + +A     S   +Y  G    G+LG G  +D   P L+    L   +  +V
Sbjct: 277 SSVAGGWRHTMA---ADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGG-ALAGQRVSLV 332

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
             G  H   V + GRV +WG G  G LGHG E+
Sbjct: 333 TCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQ 365


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G T ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 361 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 416

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 469

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 470 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 527

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 528 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 585

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 586 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 630

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 631 GQVYAWGCG 639



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 408 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 467

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 468 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 525

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 526 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 580

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 639

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 640 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 684

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 685 YAWGNNSMGQCG 696



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 453 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 510

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 511 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 567

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 568 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 623

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 624 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 681

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 682 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 26/310 (8%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4077 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4134

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q 
Sbjct: 4135 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQA 4193

Query: 160  AAGYCYLLALAC--------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 + L +AC           G  V++ G G  GKLG G+ T +  P+ ++    + +
Sbjct: 4194 RNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGI 4253

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + V  A G   +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G
Sbjct: 4254 KKV--ACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVG 4311

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQI 330
               T  ++  GDVY++G      LG           H N V  P LVT L+  N R +  
Sbjct: 4312 AEHTLALASTGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISA 4362

Query: 331  SLTNSIYWNA 340
               +S  W A
Sbjct: 4363 GRCHSAAWTA 4372



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 28/213 (13%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4051 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4110

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4111 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4168

Query: 298  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA------HTFALTESG 349
                 G GN  +N   P+ VT+L+  Q+ +     +  N++++        HT A++  G
Sbjct: 4169 -----GLGNT-SNKKLPERVTALEGYQIGQ-----ARNNTLFFLQVACGLNHTLAVSADG 4217

Query: 350  KL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
             + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4218 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 4247



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 39/337 (11%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4090

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4091 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4148

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-----------LLNLQPVVV 216
              A   S   +++ G G  G+LG G+ +++K P  +   +           L  LQ   V
Sbjct: 4149 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ---V 4203

Query: 217  AAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            A G  H   V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +
Sbjct: 4204 ACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4263

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +++DG VY+F  G+   +G   + +G+   H     PQ +  L  V    V +     
Sbjct: 4264 VALTKDGHVYTF--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG---- 4311

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                 HT AL  +G +YA+G+  +GQLG+   N+  E
Sbjct: 4312 ---AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4345



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 506 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 561

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 562 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 620

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 621 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 673

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 603 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 656

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 657 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 712

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 713 LDGIAIQQISAGTSHSLAWTALPRDRQV 740



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 19/245 (7%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4127 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4184

Query: 98   LK----------NIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHP 146
            L+           +F +Q A G   T  +S +G  V+ F  G+  +LG         P  
Sbjct: 4185 LEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK 4244

Query: 147  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
             +  L  I + ++A G  + +AL        VY+ G      L  G   +   P+ I   
Sbjct: 4245 -VDVLCGIGIKKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL 4300

Query: 207  QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
              + ++ V V  GA H   +   G V  WG    G LG G+      P +V  L      
Sbjct: 4301 AGVVIEDVAV--GAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4358

Query: 267  HVATG 271
             ++ G
Sbjct: 4359 QISAG 4363



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4229 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4288

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4289 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4341

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4342 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4374


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 148/327 (45%), Gaps = 35/327 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE---AEYGVQGTKLVTS--- 91
           P     L G +I Q + G      +++ G+VY +G   FG+    E   Q  K+      
Sbjct: 127 PERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGN 186

Query: 92  -----------PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
                      PQ +ESL NI   Q A G  FT VLS +G+VYTF +     LG+ ++ N
Sbjct: 187 LSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQN 246

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            V    L+  L +I  V+I+AGY +  A+  Q     +Y+ G    G+LG+     +  P
Sbjct: 247 SVTTPQLIKDLNDI--VKISAGYSFCAAITKQGK---LYTWGNNRNGQLGNSQSLYQTKP 301

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            ++  F   N   V V+ G    A + Q G++ TWG+G  G LGHGN+     P+ V+  
Sbjct: 302 SIVTGFGSQN-SIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFK 360

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
              K I +A G      ++ED  +Y FG G    LG   I     +  +   TP LV   
Sbjct: 361 Q--KIIKIACGGSHAAFITEDNQLYQFGRGSEGQLG---IGQNVASEASIRSTPNLVQYF 415

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTE 347
           K   ++VV ++         HT A+T+
Sbjct: 416 K--GKQVVDVTCGGE-----HTIAITQ 435



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 48/350 (13%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L   +I +  AG   +M ++  G+VY++GK+  G   +  + +  +T P+ +E
Sbjct: 72  TPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIE 131

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPL------- 147
            L    + Q + G F  A ++ +G VYT  WGN    +LGH  E    +   +       
Sbjct: 132 KLLGKKIKQISCGQFHMAAVTEDGEVYT--WGNKEFGKLGHEEELKQEQKIKIKRGNLSH 189

Query: 148 -----------LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
                      + +L NI   Q+A G  + + L+       VY+ G    G LG+ S  +
Sbjct: 190 DYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS---EDGKVYTFGYNQYGSLGYVSDQN 246

Query: 197 E-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P+LI+    +    V ++AG    A + + G++ TWG  R G LG+     ++ P 
Sbjct: 247 SVTTPQLIKDLNDI----VKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPS 302

Query: 256 VVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
           +V       +I  V+ GD     +++ G +Y++G G    LGH   +D    RH      
Sbjct: 303 IVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV----- 357

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                  +  +++++I+   S     H   +TE  +LY FG G +GQLGI
Sbjct: 358 -------EFKQKIIKIACGGS-----HAAFITEDNQLYQFGRGSEGQLGI 395



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 144/323 (44%), Gaps = 56/323 (17%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VY++G   FG+   G+Q      +P  +E L +  + +   G   +  L+  G VY++  
Sbjct: 51  VYSWGYGGFGQL--GLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGK 108

Query: 128 GNDARLGHH-------TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
                LGH        T+P  +E   LLG      + QI+ G  ++ A+        VY+
Sbjct: 109 NKGGILGHEDRLSFNMTQPERIE--KLLGK----KIKQISCGQFHMAAVT---EDGEVYT 159

Query: 181 VGCGLGGKLGHGSRTDEKH-------------------PRLIEQFQLLNLQPVVVAAGAW 221
            G    GKLGH     ++                    P+ IE   L N++   VA G  
Sbjct: 160 WGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIE--SLGNIKAKQVACGIQ 217

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
              V+ +DG+V T+G+ +YG LG+  ++   + P++++ LND+  + ++ G      +++
Sbjct: 218 FTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI--VKISAGYSFCAAITK 275

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G +Y++G   +  LG+        ++      P +VT     N  +V +S  ++     
Sbjct: 276 QGKLYTWGNNRNGQLGN--------SQSLYQTKPSIVTGFGSQNS-IVDVSCGDNF---- 322

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
              ALT+ G+LY +G G  GQLG
Sbjct: 323 -IAALTQQGQLYTWGFGGDGQLG 344



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 110/281 (39%), Gaps = 91/281 (32%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCG------------------------------- 184
           V   A G+ Y   LA +     VYS G G                               
Sbjct: 29  VCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVE 88

Query: 185 ---------------------LGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAW 221
                                 GG LGH  R   +   P  IE  +LL  +   ++ G +
Sbjct: 89  AGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIE--KLLGKKIKQISCGQF 146

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNE-------------------ECESVPKVVQALND 262
           H A V +DG V TWG   +G LGH  E                   +   +P+ +++L +
Sbjct: 147 HMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGN 206

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           +KA  VA G   T V+SEDG VY+FG  +  SLG+  ++D       +V TPQL+  L  
Sbjct: 207 IKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY--VSD-----QNSVTTPQLIKDLND 259

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               +V+IS   S        A+T+ GKLY +G    GQLG
Sbjct: 260 ----IVKISAGYSF-----CAAITKQGKLYTWGNNRNGQLG 291



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V +WG+G +G LG  NE     P  ++ L D K   V  G   +  ++ +G+VYS+G  +
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH      +     N+  P+ +  L  + +++ QIS         H  A+TE G++
Sbjct: 111 GGILGH------EDRLSFNMTQPERIEKL--LGKKIKQISCG-----QFHMAAVTEDGEV 157

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           Y +G  + G+LG E    Q ++   +R ++
Sbjct: 158 YTWGNKEFGKLGHEEELKQEQKIKIKRGNL 187


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 149/326 (45%), Gaps = 39/326 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L+S  G+V+ +G+ S G   +G+   K VT PQL+ESL    +   A G F 
Sbjct: 278 ACGVKHAALVSRQGEVFTWGEASGGRLGHGM--GKDVTGPQLIESLAATSIDFVACGEFH 335

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH T+ +   P  + G LE +   QIA+  C    
Sbjct: 336 TCAVTMTGEIYT--WGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL---QIASVSCGPWH 390

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG +    +PR +E   L  L+ + VA G WHAA + +
Sbjct: 391 TALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVES--LSGLRTIAVACGVWHAAAIVE 448

Query: 229 -----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
                       G++ TWG G    LGHG++E    P  V AL D     VA G   T  
Sbjct: 449 VIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVG 508

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           ++  G VY+ G      LG N  ADG+         P LV   K   + V +I+     Y
Sbjct: 509 LTTSGKVYTMGSTVYGQLG-NPNADGK--------LPCLVED-KLTKDCVEEIAC--GAY 556

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
              H   LT   +++ +G G  G+LG
Sbjct: 557 ---HVAVLTSRNEVFTWGKGANGRLG 579



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 41/319 (12%)

Query: 66  GQVYAFGK------DSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           G VY +G+        FG +   G  G++  V  P+ +ES   + V   A G    A++S
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288

Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
           R+G V+T+   +  RLGH     DV    L+ +L    +  +A G  +  A+        
Sbjct: 289 RQGEVFTWGEASGGRLGHGMG-KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGE--- 344

Query: 178 VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           +Y+ G G    G LGHG+      P+ I    L  LQ   V+ G WH A++   G++ T+
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTF 403

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDV 284
           G G +G LGHG++E    P+ V++L+ ++ I VA G +    + E            G +
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKL 463

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +++G G+ + LGH       G++    L P  V++L  ++    +++  +S+     T  
Sbjct: 464 FTWGDGDKSRLGH-------GDKEPR-LKPTCVSAL--IDHTFHRVACGHSL-----TVG 508

Query: 345 LTESGKLYAFGAGDKGQLG 363
           LT SGK+Y  G+   GQLG
Sbjct: 509 LTTSGKVYTMGSTVYGQLG 527



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 19/246 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  +FG   +G + T  V  P+ VESL  +  
Sbjct: 376 LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRT 433

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G +  A +              G+++T+  G+ +RLGH  +   ++P  +   ++
Sbjct: 434 IAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID 493

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   VY++G  + G+LG+ +  D K P L+E  +L    
Sbjct: 494 HT-FHRVACGHSLTVGLT---TSGKVYTMGSTVYGQLGNPN-ADGKLPCLVED-KLTKDC 547

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V AL +    ++A G 
Sbjct: 548 VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGS 607

Query: 273 YTTFVV 278
             T  +
Sbjct: 608 NFTAAI 613


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G T ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDTPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+LV  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+V+ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4080 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4137

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4138 GEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4196

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4197 ACGLNHTLAVST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4252

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L  V    VA G   T  ++
Sbjct: 4253 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAIT 4312

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P L+T L+  N R +     +S  W
Sbjct: 4313 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAW 4363

Query: 339  NA 340
             A
Sbjct: 4364 TA 4365



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 36/357 (10%)

Query: 23   RNGKRNLLGREV---NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            R+G+    GR V    G P + ++ Q I       G   T +I   G V A G+ S+G  
Sbjct: 4011 RHGQLAEAGRNVMIPAGAPSFSQAQQVI------CGQNCTFVIQANGTVLACGEGSYGRL 4064

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDARLGHH 136
              G      V +  ++ +L+   V Q       +  +  L+  G V+++  G+  +LGH 
Sbjct: 4065 GQGNSDDLHVLT--VISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4122

Query: 137  TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
                   P  +   L+   VVQ++ G+ +   +    +   +++ G G  G+LG G+ ++
Sbjct: 4123 NSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVT---ADGKMFTFGNGDYGRLGLGNTSN 4178

Query: 197  EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPK 255
            +K P  +   +    Q   VA G  H   V  DG  V  +G G YG LG GN   +S P+
Sbjct: 4179 KKLPERVTALE--GYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQ 4236

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
             V  L  +    VA G   +  +++DG VY+F  G+   +G   + +G+   H     PQ
Sbjct: 4237 KVDVLCGIGIKKVACGTQFSVALTKDGHVYTF--GQDRLIG---LPEGRARNHNR---PQ 4288

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
             V  L  V    V +          HT A+T +G +YA+G+  +GQLG+   N+  E
Sbjct: 4289 QVPVLAGVVIEDVAVG-------AEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4054 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4113

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4114 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRL-- 4171

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4172 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4218

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4219 GDYGKLGL---GNSTAKSSPQKVDV 4240



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+L+E+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLVEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           VE L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 VEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQV 742


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q + G   T+ ++  G+VYA G + + +  + +   +    PQL+  L++  ++Q + G+
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGS 99

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  LS  G+V   SWG++   +LGH TE   V+   ++  L +  VVQIA G  + LA
Sbjct: 100 RHSLALSDWGQV--LSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++ 
Sbjct: 158 LT---SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + G V  +GWGR  C  LG  +E   + P  ++ L  +     A GD  +  ++ +G V+
Sbjct: 215 KSGAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVF 272

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH           +N + P++V  L  +   + Q++  N      HT A 
Sbjct: 273 TCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLAF 317

Query: 346 TES-GKLYAFGAGDKGQLG 363
             S GK+YAFG G  GQLG
Sbjct: 318 VPSRGKVYAFGLGSSGQLG 336



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 145/298 (48%), Gaps = 40/298 (13%)

Query: 7   QVAHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAG 66
           Q+ H  P  RP +I E                     LQ   IIQ + G+  ++ +SD G
Sbjct: 71  QLGHDLPTKRPQLIPE---------------------LQDYVIIQISCGSRHSLALSDWG 109

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           QV ++G +  G+  +  +  ++V  P++V  L +  VVQ A GN  +  L+  G +Y  S
Sbjct: 110 QVLSWGDNDCGQLGHATE-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELY--S 166

Query: 127 WGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQIAAG--YCYLLALACQPSGMAVY 179
           WG++   +LG ++ PND+    +PL L TL  IP+  IA G  + +L++     SG AV+
Sbjct: 167 WGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS----KSG-AVF 220

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
             G    G+LG    T+  +P  ++  + L ++    A G   +  +  +G V T G G 
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVR--FAACGDEFSVFLTNEGGVFTCGAGA 278

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 296
           YG LGHG    E +P++V  L       VA G+ +T   V   G VY+FG G S  LG
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLG 336



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   PR I       +Q V  + G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQV--SCGHRHTLFLTATGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  +     P+++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATEKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G+   GV     +T 
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVNSPNDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V   A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFAACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A V   G+V  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +  AA G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A +   G+VY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 146/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G+VY++G++S G   +GV     V  P+LVE+L ++ +   A G + 
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLVEALAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN       LGH  E +   P  L G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAV 432

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 433 VT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V +L +     VA G   T 
Sbjct: 488 VMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      LG N  ADG        + P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   + +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVASL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C+ +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCFTVALT---TSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 146/308 (47%), Gaps = 42/308 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G VY  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LVE 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
            L ++ +  +A G  +  A+    SG  +Y+ G G    G LGHG+      P+ +    
Sbjct: 359 ALAHMNIELVACGEYHTCAVTL--SG-DLYTWGNGTFNFGLLGHGNEVSHWMPKRLNG-P 414

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ + 
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVR 474

Query: 268 VATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            A G + T  V E             G ++++G G+   LGH       G++    L P 
Sbjct: 475 AACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPT 526

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V SL + N    Q++  +       T ALT SG +Y  G+   GQLG    N Q +   
Sbjct: 527 CVASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMV 575

Query: 376 PERVDIDL 383
           P RV+  L
Sbjct: 576 PARVEGKL 583



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
           R+G       +C  +PK ++    +   +++ G     +V++ G+VYS+G      LGH 
Sbjct: 288 RFGNSSGAKMDC-LLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHG 346

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
              D        V  P+LV +L  +N  +V            HT A+T SG LY +G G
Sbjct: 347 VDCD--------VPQPKLVEALAHMNIELVACG-------EYHTCAVTLSGDLYTWGNG 390


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 167/332 (50%), Gaps = 28/332 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P   +++  +R +  A G+    +++  G+VY  G+ + G    G+  T+ ++ P  ++
Sbjct: 2892 SPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGR--LGLGNTENISIPVQLD 2949

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +L   FV +  +  G   +  ++REG+V+++  G D +LGH    + + P  L+  LE+ 
Sbjct: 2950 TLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSP-TLIEALESK 3008

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             +V+IA G  +  A+        +Y+ G G  G+LGHG       P+ ++  Q  + + +
Sbjct: 3009 LIVEIACGSSHSAAVTADGE---LYTWGLGDYGRLGHGDSKTLHIPKQVKALQ--DYKVI 3063

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +A G+  A  +      C W WG   +G LG G  E  ++P+ + AL       +A G 
Sbjct: 3064 DIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGA 3123

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT-SLKQVNERVVQIS 331
              +  +S  G V+++G G+   LGH       GN  ++  +PQL+   LK+  +R+ +I+
Sbjct: 3124 QFSLALSTTGKVWTWGKGDYYRLGH-------GN-DSHYRSPQLIEGPLKK--KRITEIA 3173

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +        H  A+T++G++Y++G  D GQ G
Sbjct: 3174 VG-----ALHCLAVTDTGEVYSWGDNDHGQQG 3200



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 42/339 (12%)

Query: 25  GKRNLLGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           G  N LG E N G+     ++  + I Q    +   + +++ G+VY+   ++  EA    
Sbjct: 446 GNINWLGGESNDGSLKIYETVAELGIKQIMCSSDNIIALTNNGRVYSLAYNARCEA---- 501

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
                   P L++SL +I + + A    G  + A LS +G VY++  G+  RLGH     
Sbjct: 502 --------PVLLDSLIDIKIKKIAANVEGEHYLA-LSSDGCVYSWGSGDGGRLGH----G 548

Query: 141 DVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           D+   P L+  L N  + QIA G  Y  A+    S   +Y+ G G  G+LGHG+  D   
Sbjct: 549 DIRREPELVKELVNKKITQIACGSTYSAAVT---SNGELYTWGRGSYGRLGHGNSEDRLL 605

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           P L+      ++  V   +G  H   + +DG V +WG G YG LG G  +C  VPKVV+ 
Sbjct: 606 PTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVET 665

Query: 260 L--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           L  ++   ++V  G   +  + +DG V+++G  +   LGH  +         +V  P++V
Sbjct: 666 LKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTL--------DHVRYPKMV 717

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             L  +N  +V I++  S     H  ALT++ +++ +G+
Sbjct: 718 EGL--INYHIVDIAVGPS-----HCLALTDNCQIFTWGS 749



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 23/329 (6%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P+    +  +R    A G     +++  G+VYA G    G    G      + +P ++E
Sbjct: 3793 SPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDN--IVTPVIIE 3850

Query: 97   SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             L+++ + + ++  G     VL+    V+++  G D +LGH  + +   P  +   L   
Sbjct: 3851 PLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGK- 3909

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             +V I+ G  +  A+    S   +Y+ G G  G+LGHG   D   P+L+E  +   +  V
Sbjct: 3910 QIVHISCGSSHSAAIT---SKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDV 3966

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
               +G      +  D  V +WG G YG LG G  +    P  +++L  +    V  G   
Sbjct: 3967 ACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQF 4026

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            +  ++++GD+Y++G G+   LGH        N H  V  P+ V  L+   +++V ++   
Sbjct: 4027 SVALTKNGDLYTWGKGDYYRLGHGT------NDH--VRRPRKVACLQ--GKQIVTVAAG- 4075

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H  A T++G+++ +G  D+GQLG
Sbjct: 4076 ----SLHCVACTDAGEVFTWGDNDEGQLG 4100



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
            NG+  L   E    P+   +L    ++ +    G   ++ I+  G+V+++G+   G+  +
Sbjct: 2931 NGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGH 2990

Query: 82   GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
            G   ++L  SP L+E+L++  +V+ A G+  +A ++ +G +YT+  G+  RLGH      
Sbjct: 2991 GDVTSRL--SPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTL 3048

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  +   L++  V+ IA G      LA   +   V+S G G  GKLG G       P+
Sbjct: 3049 HIPKQV-KALQDYKVIDIACGSRDAQTLALTDNN-CVWSWGDGDFGKLGRGGSEGCNIPQ 3106

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-L 260
             I+   L       +A GA  +  +   G+V TWG G Y  LGHGN+     P++++  L
Sbjct: 3107 KIDA--LCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPL 3164

Query: 261  NDVKAIHVATGDYTTFVVSEDGDVYSFG 288
               +   +A G      V++ G+VYS+G
Sbjct: 3165 KKKRITEIAVGALHCLAVTDTGEVYSWG 3192



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 12/251 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP    +L G +I+  + G+  +  I+  G++Y +GK  +G   +G     L   P+L+E
Sbjct: 3899 TPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLE 3956

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPL-LGTLEN 153
            +LK+  V+  A G+     L+       +SWG+    +LG     +D    PL + +L  
Sbjct: 3957 ALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG--SDGCKKPLRIESLIG 4014

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
            + V ++  G  + +AL        +Y+ G G   +LGHG+    + PR +   Q    Q 
Sbjct: 4015 MAVCKVECGSQFSVALT---KNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQ--GKQI 4069

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V VAAG+ H       G V TWG    G LG+G       P +V  L +VK   V  G  
Sbjct: 4070 VTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSA 4129

Query: 274  TTFVVSEDGDV 284
             +F  S +  +
Sbjct: 4130 HSFAWSTEAPI 4140



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 19/188 (10%)

Query: 178  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
            V+  G    G+LG    +  K P   E   +  L+PV +A G+    +V  DG+V   G 
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSP--TEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGE 2928

Query: 238  GRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
            G  G LG GN E  S+P  +  LN   VK + V  G   +  ++ +G V+S+G G    L
Sbjct: 2929 GANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKL 2988

Query: 296  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
            GH  +         + L+P L+ +L+  ++ +V+I+  +S     H+ A+T  G+LY +G
Sbjct: 2989 GHGDV--------TSRLSPTLIEALE--SKLIVEIACGSS-----HSAAVTADGELYTWG 3033

Query: 356  AGDKGQLG 363
             GD G+LG
Sbjct: 3034 LGDYGRLG 3041



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 10/238 (4%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P    +L+   I++ A G+  +  ++  G++Y +G   +G   +G   +K +  P+ V+
Sbjct: 2998 SPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHG--DSKTLHIPKQVK 3055

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            +L++  V+  A G+     L+       +SWG+    +LG         P  +   L   
Sbjct: 3056 ALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKI-DALCGR 3114

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V +IA G  + LAL+   +   V++ G G   +LGHG+ +  + P+LIE   L   +  
Sbjct: 3115 DVCRIACGAQFSLALS---TTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEG-PLKKKRIT 3170

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV-VQALNDVKAIHVATG 271
             +A GA H   V   G V +WG   +G  G+GN      P++ +  L+ VK  H+A G
Sbjct: 3171 EIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACG 3228



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 31/243 (12%)

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           +     WGN   LG  +    ++   +  T+  + + QI      ++AL    +   VYS
Sbjct: 439 KTEVLGWGNINWLGGESNDGSLK---IYETVAELGIKQIMCSSDNIIALT---NNGRVYS 492

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
                   L + +R +   P L++    + ++ +       H   +  DG V +WG G  
Sbjct: 493 --------LAYNARCEA--PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDG 542

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           G LGHG+   E  P++V+ L + K   +A G   +  V+ +G++Y++G G    LGH   
Sbjct: 543 GRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGH--- 597

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
               GN    +L P LV  L      VV ++  +    +AHT A+ + G ++++G GD G
Sbjct: 598 ----GNSEDRLL-PTLVAGLS--GSHVVDVACGSG---DAHTLAIDKDGIVWSWGDGDYG 647

Query: 361 QLG 363
           +LG
Sbjct: 648 KLG 650



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 7/141 (4%)

Query: 31   GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
            G E    P    +L G  + + A GA  ++ +S  G+V+ +GK  +    +G        
Sbjct: 3098 GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHG--NDSHYR 3155

Query: 91   SPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPL 147
            SPQL+E  LK   + + A+G      ++  G VY  SWG++   + G+     +  P   
Sbjct: 3156 SPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVY--SWGDNDHGQQGNGNTTVNKRPQIC 3213

Query: 148  LGTLENIPVVQIAAGYCYLLA 168
            LG L+ + +  IA G  + +A
Sbjct: 3214 LGELDGVKISHIACGSSHSIA 3234



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 229  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
            D RV  WG    G LG         P  ++ +  ++ + +A G  T F+V+ DG VY  G
Sbjct: 2868 DSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927

Query: 289  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
             G +  L       G GN   N+  P  + +L     + V +          H+  +T  
Sbjct: 2928 EGANGRL-------GLGNTE-NISIPVQLDTLNMHFVKKVTVHPGGR-----HSLCITRE 2974

Query: 349  GKLYAFGAGDKGQLG 363
            GK++++G G  G+LG
Sbjct: 2975 GKVFSWGEGIDGKLG 2989


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 33/339 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  A+G   T+ ++   +VY+ G + FG+   G Q ++    P LV       +   A 
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQ--LGQQKSQ--CRPSLVTGFGAEEIFHVAA 88

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+FF+  ++  G +  F WG         + + +    LL  + +  VVQ+A G  + +A
Sbjct: 89  GDFFSIAIAESGLL--FGWGRSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 226
           L  + +   + S G    G+LG GS   E   P +I     LN  P+  + AGA+H+ V+
Sbjct: 147 LTEEGT---ILSWGSNTQGQLGLGSSEIEFLEPTIIAS---LNAFPISQICAGAYHSGVL 200

Query: 227 GQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
              G + TWG   +G LGHGN +  +S P++V+ L   + + VA G+  +   + +G V+
Sbjct: 201 SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           S+G G +  LGHN++        ANV  P+ +  L  +   V QI          HT +L
Sbjct: 261 SWGHGGNGQLGHNSM--------ANVTQPKKIMEL--MGTTVCQICCGRR-----HTISL 305

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           T+  KL  FG     QLG    +N T    P  + I L+
Sbjct: 306 TDKRKLLGFGLNSNNQLG---THNDTSARLPITIPISLT 341



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 5/196 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL    I Q  AGA  + ++S +G ++ +GK+++G+  +G       +SP+LV++
Sbjct: 176 PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG-NSDSFQSSPRLVKT 234

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  VV  A+G   +   +R G V+++  G + +LGH++  N  +P  ++  L    V 
Sbjct: 235 LRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIM-ELMGTTVC 293

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QI  G  + ++L        +   G     +LG  + T  + P  I      + Q   +A
Sbjct: 294 QICCGRRHTISLT---DKRKLLGFGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIA 350

Query: 218 AGAWHAAVVGQDGRVC 233
           AG   +    Q+   C
Sbjct: 351 AGGDQSFSGSQNESSC 366



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N   + +A+G  H   +    +V + G   +G LG    +C   P +V      +  HVA
Sbjct: 30  NQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCR--PSLVTGFGAEEIFHVA 87

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            GD+ +  ++E G +  FG G S    +  +   Q + H     P+L+   K ++  VVQ
Sbjct: 88  AGDFFSIAIAESGLL--FGWGRSL---NGELMCKQDSLHE----PKLLD--KIMHWSVVQ 136

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           ++         H  ALTE G + ++G+  +GQLG+
Sbjct: 137 VACGAQ-----HCIALTEEGTILSWGSNTQGQLGL 166


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GYC+ L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G   +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYCHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDSDGQLGL 118


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 12/263 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVE 96
           P    +L    I Q + G    ++++D  QV+++G D  G+  + ++ G      P++V+
Sbjct: 75  PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVK 134

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L ++ +VQ A G   +  LS +GR+  FSWGN++  +LG  +  N  +P  L  +L  I
Sbjct: 135 ELSSLQIVQVACGGKHSLALSNDGRI--FSWGNNSHGQLGIGSTKNQPKPQELT-SLTGI 191

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
           P  QI AG  +   L+   SG AV+  G    G+LG G   D K+P  ++   L +L+  
Sbjct: 192 PFCQIVAGGSHSFVLS--KSG-AVFGFGRNTFGQLGLGDTGDRKYPTHVKS--LRSLKVT 246

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-Y 273
            ++ G  H AV+  DG V T+G G YG LGH +   E++P+ V  L  ++   +A G  +
Sbjct: 247 HISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMH 306

Query: 274 TTFVVSEDGDVYSFGCGESASLG 296
           T   V   G +YSFG G +  LG
Sbjct: 307 TMAYVESSGRIYSFGLGGNGQLG 329



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 153/318 (48%), Gaps = 31/318 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           + + G   T+ +   G VY  G + +G+    +   K    P ++ +L    + Q + G+
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQ----LGQDKGHKRPTVITALDTQSIQQVSCGD 93

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEP--NDVEPHPLLGTLENIPVVQIAAGYCYL 166
           +   V++ + +V  FSWG D   +LGH  E   N+     ++  L ++ +VQ+A G  + 
Sbjct: 94  YHNLVVNDKYQV--FSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHS 151

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LAL+   +   ++S G    G+LG GS  ++  P+  E   L  +    + AG  H+ V+
Sbjct: 152 LALS---NDGRIFSWGNNSHGQLGIGSTKNQPKPQ--ELTSLTGIPFCQIVAGGSHSFVL 206

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            + G V  +G   +G LG G+      P  V++L  +K  H++ G+  T V++ DG V +
Sbjct: 207 SKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLT 266

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+      N H  +  P+ V  L       + + +T       HT A  
Sbjct: 267 FGAGSYGQLGHNS------NNHEAL--PRKVFEL-------MGLEVTQLACGRMHTMAYV 311

Query: 347 ES-GKLYAFGAGDKGQLG 363
           ES G++Y+FG G  GQLG
Sbjct: 312 ESSGRIYSFGLGGNGQLG 329



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 5/167 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL GI   Q  AG   + ++S +G V+ FG+++FG+   G  G +    P  V+S
Sbjct: 182 PQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDR--KYPTHVKS 239

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+++ V   + G   TAVL+ +G V TF  G+  +LGH++  ++  P  +   L  + V 
Sbjct: 240 LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVF-ELMGLEVT 298

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           Q+A G  + +A   + SG  +YS G G  G+LG    T+   P  ++
Sbjct: 299 QLACGRMHTMAYV-ESSG-RIYSFGLGGNGQLGSKGTTNCNTPITVD 343


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 24/346 (6%)

Query: 20   INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            +N++     L G +V   P Y   L  ++ I  + G+    ++S  G++YA G+ + G  
Sbjct: 2914 LNDKEQLGGLKGSKVK-LPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGR- 2971

Query: 80   EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
              G+     V +P+ V  L    V + A+  G      L+ +G+V+++  G D +LGH  
Sbjct: 2972 -LGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGN 3030

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                 +P  LL +L    +  IA G  +  A+    S   +Y+ G G  G+LGHG    +
Sbjct: 3031 RVTLEKPK-LLESLRTKRIRDIACGSSHSAAIT---SSGELYTWGLGEYGRLGHGDNCTQ 3086

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              P+L+   Q   +  V   +       + ++G V +WG G +G LG G  E  SVP  V
Sbjct: 3087 LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV 3146

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            + LN V  + +  G   +  +++ G+V+++G G+   LGH        ++H    TP  +
Sbjct: 3147 ERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGT------DQHVRKPTP--I 3198

Query: 318  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              L+   ++V+ +++        H  A+T+SG+++A+G  D GQ G
Sbjct: 3199 QGLR--GKKVIHVAVG-----ALHCLAVTDSGQVFAWGDNDHGQQG 3237



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 153/342 (44%), Gaps = 54/342 (15%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P  C +L  +R IQ A G      ++  G++YA G  +      G+ GT  V++P LVES
Sbjct: 3968 PTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA--GGRLGIGGTDSVSTPTLVES 4025

Query: 98   LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+++ + + A+  G      LS +G V+++  G D +LGH    +   P  L+  L  I 
Sbjct: 4026 LQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK-LIEALSGIG 4084

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR-------------- 201
            VV IA G  +    AC  S   V + G G  G+LGHG   D+  P+              
Sbjct: 4085 VVDIACGSAHS---ACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGV 4141

Query: 202  ------LIEQFQLLNLQP-----------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
                  L E+  +    P           + V  G+  +  + + G V TWG G Y  LG
Sbjct: 4142 TAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG 4201

Query: 245  HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
            HGN +    PK V AL   K I +ATG       S+ G+V+++G  +   LG   +   Q
Sbjct: 4202 HGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQ 4261

Query: 305  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
                     P+LV SL+   + +V++     I  +AHT AL+
Sbjct: 4262 --------RPRLVQSLQ--GKHIVKV-----ICGSAHTLALS 4288



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 153/318 (48%), Gaps = 36/318 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           +++ Q A       +++ +GQ+Y+    S  E            +P+LVE L+ + V+Q 
Sbjct: 534 LQVRQVACTENSIYIVTTSGQLYSI-HSSCAE----------TVAPKLVEGLEGVSVIQI 582

Query: 107 A--IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A          LS  G VY++  G   RLGH    +   P  +   LE   V  I AG  
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKI--ALEK-QVTAIYAGAS 639

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           Y  A++   S   +++ G G  G+LGHG+  D+  P  ++  +   +  V + +G  H+ 
Sbjct: 640 YSAAVS---SVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSM 696

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            V   G +  WG G +G LG+G+     +P  ++ ++ V  I+  +G   +  +S DG +
Sbjct: 697 AVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIY--SGSQFSVALSYDGTL 754

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           YS+G G    LGH        + H+NV  P+LV +L+   +++V +++ +     AH  A
Sbjct: 755 YSWGKGHGGRLGHG------NSEHSNV--PKLVHALE--GKKIVDVAVGS-----AHCLA 799

Query: 345 LTESGKLYAFGAGDKGQL 362
           LT SG+LY +G  D  Q+
Sbjct: 800 LTSSGELYGWGRNDYQQI 817



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 36/300 (12%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           ++Y F  ++   +   + G+    S   +E   ++ V Q A       +++  G++Y+  
Sbjct: 500 EMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLYSI- 558

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
                   H +    V P  L+  LE + V+QIAA      A+A   +G  VYS G G G
Sbjct: 559 --------HSSCAETVAPK-LVEGLEGVSVIQIAAHCEGRHAMALSSAG-EVYSWGAGEG 608

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGHG    ++ P  I     L  Q   + AGA ++A V   G + TWG G YG LGHG
Sbjct: 609 GRLGHGDTASKEVPTKIA----LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHG 664

Query: 247 NEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           N + + VP  VQAL   K + VA  +GD  +  V++ G ++++G G+   LG+       
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGN------- 717

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAFGAGDKGQLG 363
           G+ + + L  Q           +  +S    IY  +  + AL+  G LY++G G  G+LG
Sbjct: 718 GSCNGSPLPVQ-----------IEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 161/334 (48%), Gaps = 58/334 (17%)

Query: 65   AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
            A  ++ +G +  G+   G+ G++ +  P   E+L  +  +Q A G      ++ +G++Y 
Sbjct: 3943 ASTIFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYA 4000

Query: 125  FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA--AGYCYLLALACQPSGMAVYSVG 182
              +G   RLG     + V    L+ +L+++ + ++A  +G  + LAL+   S   V+S G
Sbjct: 4001 TGYGAGGRLGIGGT-DSVSTPTLVESLQHVIIKKVAVNSGGKHCLALS---SDGEVFSWG 4056

Query: 183  CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
             G  GKLGHG+R     P+LIE    + +  V +A G+ H+A +   G V TWG GRYG 
Sbjct: 4057 EGEDGKLGHGNRDSYDRPKLIEALSGIGV--VDIACGSAHSACITSQGHVLTWGKGRYGR 4114

Query: 243  LGHGNEECESVPK---------------------------------VVQALNDVKAIHVA 269
            LGHG+ E +  PK                                  +++L  +  I V 
Sbjct: 4115 LGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVE 4174

Query: 270  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
             G   +  ++  G VY++G G+   LGH       GN   +V  P+ V +L+   ++++ 
Sbjct: 4175 CGSQFSVALTRSGSVYTWGKGDYHRLGH-------GNTD-HVRRPKKVAALQ--GKKIIS 4224

Query: 330  ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            I+ T S+    H  A ++SG+++ +G  D+GQLG
Sbjct: 4225 IA-TGSL----HCVACSDSGEVFTWGDNDEGQLG 4253



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGA-GR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P     L+G+ +IQ AA   GR  M +S AG+VY++G    G   +G   +K V +   +
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIAL 627

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E  K +  + A  G  ++A +S  G ++T+  G   RLGH    +   P  +   L+   
Sbjct: 628 E--KQVTAIYA--GASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQV-QALKAYK 682

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV +A G     ++A    G+ +++ G G  GKLG+GS      P  IE    +      
Sbjct: 683 VVDVALGSGDAHSMAVTDGGL-LFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSV----AR 737

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + +G+  +  +  DG + +WG G  G LGHGN E  +VPK+V AL   K + VA G    
Sbjct: 738 IYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHC 797

Query: 276 FVVSEDGDVYSFG 288
             ++  G++Y +G
Sbjct: 798 LALTSSGELYGWG 810



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 12/237 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+  RI   A G+  +  I+ +G++Y +G   +G   +G   T+L   P+LV +
Sbjct: 3037 PKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQL--KPKLVTA 3094

Query: 98   LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            L+   VVQ A G  +  T  L+ EG V+++  G+  +LG         PH +   L  + 
Sbjct: 3095 LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV-ERLNGVG 3153

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            VVQI  G  + LAL        V++ G G   +LGHG+   ++H R     Q L  + V+
Sbjct: 3154 VVQIECGAQFSLALT---KIGEVWTWGKGDYYRLGHGT---DQHVRKPTPIQGLRGKKVI 3207

Query: 216  -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             VA GA H   V   G+V  WG   +G  G GN      P +V  L+ V    VA G
Sbjct: 3208 HVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 39/272 (14%)

Query: 121 RVYTFSWGN--DARLGHHTEPNDVEPHPLLG--------TLENIPVVQIAAGYCYLLALA 170
           +++T  W +      G  +E ++     L G        T+E  P +Q+    C   ++ 
Sbjct: 488 KIFTLGWSSCSPEMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIY 547

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
              +   +YS+         H S  +   P+L+E  + +++  +       HA  +   G
Sbjct: 548 IVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAG 598

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            V +WG G  G LGHG+   + VP  +     V AI+   G   +  VS  G+++++G G
Sbjct: 599 EVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA--GASYSAAVSSVGELFTWGRG 656

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
               LGH    D           P  V +LK    +VV ++L +    +AH+ A+T+ G 
Sbjct: 657 TYGRLGHGNSDDK--------FVPTQVQALKAY--KVVDVALGSG---DAHSMAVTDGGL 703

Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
           L+A+G GD G+LG     N +  G+P  V I+
Sbjct: 704 LFAWGDGDFGKLG-----NGSCNGSPLPVQIE 730



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 21/137 (15%)

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            +V  WG      LG        +P     L+ +K IH++ G  + F+VS+DG +Y+  CG
Sbjct: 2908 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYA--CG 2965

Query: 291  ESAS----LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            E  +    LGHN           NV TP+ V  L   N+ VV+    +S     H  ALT
Sbjct: 2966 EGTNGRLGLGHN----------NNVPTPRQVPIL---NQYVVKKVAVHS--GGKHAMALT 3010

Query: 347  ESGKLYAFGAGDKGQLG 363
              GK++++G G+ G+LG
Sbjct: 3011 LDGKVFSWGEGEDGKLG 3027


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 39/356 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + +   A G     +++  G+V+++G +S      G Q    V+ P+LVE+
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNES--SRTLGHQINDSVSCPKLVEA 310

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENI 154
           L ++ V   A G+  T  ++  G +  +S G   RLG   +  E N   PH L G +++I
Sbjct: 311 LASVHVKAVAFGSKHTCAVTVSGELLEWSEGAH-RLGLLSNWYERNQWSPHKLFGPMDSI 369

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V +IA G  +   +    S   +++ G G  G LGHG +     P+ +E  + L ++ V
Sbjct: 370 SVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426

Query: 215 VVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
             A G WH A V             G++ TWG    G LGH +++ + VP  V  L    
Sbjct: 427 --ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
            + V+ G   T V++  G V++ G  +   LG N  ADG+     ++ T +   +LK  N
Sbjct: 485 FLQVSCGAALTVVLTSTGVVFTIGSSKHGQLG-NPHADGE-----SICTVE--GTLK--N 534

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           E V +IS  +S     H   LT  G+++ +G G  GQLG+   +N   R +P  V+
Sbjct: 535 EFVREISSGSS-----HVAVLTLKGQVFTWGKGADGQLGLGDYDN---RSSPTLVE 582



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 20/239 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIF 102
           +  I + + A G   T +I+ +GQ++ +G  +FG   +G  QG   +  P+ VESLK + 
Sbjct: 366 MDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQG---IARPKEVESLKGLR 422

Query: 103 VVQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           V   A G + TA +          +  G+++T+   +  +LGH  +   + P   +  L 
Sbjct: 423 VKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVP-TCVDLLT 481

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +   +Q++ G    + L    S   V+++G    G+LG+     E    +  +  L N  
Sbjct: 482 SYDFLQVSCGAALTVVLT---STGVVFTIGSSKHGQLGNPHADGESICTV--EGTLKNEF 536

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +++G+ H AV+   G+V TWG G  G LG G+ +  S P +V+AL       +A G
Sbjct: 537 VREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIACG 595



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 18/123 (14%)

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           +++P++V +   +    +A G+    +V++ G+V+S+G   S +LGH  I D       +
Sbjct: 250 KALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-IND-------S 301

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           V  P+LV +L  V+ + V        + + HT A+T SG+L  +  G   +LG  L++N 
Sbjct: 302 VSCPKLVEALASVHVKAV-------AFGSKHTCAVTVSGELLEWSEG-AHRLG--LLSNW 351

Query: 371 TER 373
            ER
Sbjct: 352 YER 354


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 34/321 (10%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL----KNIFVVQ 105
           IQ  AG   T  + D G ++A GK S G+   G   +K     Q +  L    +NI  + 
Sbjct: 371 IQLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSK-----QCLHKLNLFNQNIDQIS 425

Query: 106 AAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           ++ G +  T  L++ G VY++  G   +LGH        P  + G  +N  +  I+AG  
Sbjct: 426 SSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSR 485

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +  A+        +Y+ G G  G+LGHG  + ++ P L+      +     VAAG  H  
Sbjct: 486 HSAAITKDGD---LYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQ----VAAGCSHTV 538

Query: 225 VVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           V+ +D   V T+G G  G LGHGN + E  PK+V AL  ++   +A G   +  ++  G 
Sbjct: 539 VLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGF 598

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           +Y +GCG            G G   A  L P++V SL+ V+  +V ISL      + H  
Sbjct: 599 IYVWGCGPCL---------GVGAADAVHLLPKIVESLRDVH--IVDISLG-----DCHCL 642

Query: 344 ALTESGKLYAFGAGDKGQLGI 364
           AL+   ++Y++G  + GQ G+
Sbjct: 643 ALSADHEVYSWGNNNMGQCGL 663



 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 85/305 (27%), Positives = 153/305 (50%), Gaps = 28/305 (9%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIF 102
           Q I  I ++ G+   T+ ++  G VY++G   FG+  +G   T+ +  P+++  + KN  
Sbjct: 419 QNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKL--PKVIRGVFKNQI 476

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +   + G+  +A ++++G +YT+  G   RLGH        P  L+ +++     Q+AAG
Sbjct: 477 ITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVP-TLVRSID--AASQVAAG 533

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + + L+     M V++ G G  GKLGHG+   E +P++++  + + ++   +AAG   
Sbjct: 534 CSHTVVLS--KDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKK--IAAGTQC 589

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G +  WG G   CLG G  +    +PK+V++L DV  + ++ GD     +S D
Sbjct: 590 SIALTWTGFIYVWGCGP--CLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSAD 647

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            +VYS+G        +N    G G+    V  P  V +L  +  ++ QIS   S     H
Sbjct: 648 HEVYSWG-------NNNMGQCGLGHCFTPVSLPTKVLALDGI--KIEQISTGTS-----H 693

Query: 342 TFALT 346
           +FA T
Sbjct: 694 SFAWT 698



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG      L  GN++    PK   A  +  AI +  G Y TF + +DG +++ G G    
Sbjct: 342 WGSNSSHQLVEGNKDKILTPKKNDAFKN--AIQLEAGQYCTFALFDDGSLHACGKGSHGK 399

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG   + D          + Q +  L   N+ + QIS +     ++HT ALT++G +Y++
Sbjct: 400 LG---LGDSS--------SKQCLHKLNLFNQNIDQISSSKGS--DSHTLALTKNGVVYSW 446

Query: 355 GAGDKGQLG 363
           G G+ G+LG
Sbjct: 447 GDGEFGKLG 455



 Score = 50.4 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NGK      ++   P    +L+GIRI + AAG   ++ ++  G +Y +G         GV
Sbjct: 555 NGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC----LGV 610

Query: 84  QGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND----ARLGHHTE 138
                V   P++VESL+++ +V  ++G+     LS +  VY  SWGN+      LGH   
Sbjct: 611 GAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVY--SWGNNNMGQCGLGHCFT 668

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
           P  + P  +L  L+ I + QI+ G  +  A    P
Sbjct: 669 PVSL-PTKVLA-LDGIKIEQISTGTSHSFAWTTPP 701


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 154/320 (48%), Gaps = 29/320 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIG 109
           Q A G   T+ ++  G+VYA G + + +  + +   +   SP  L+  L++  ++Q   G
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 110 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  LS  G+V   SWG++   +LGH T+   V+   ++  L    VVQIA G  + L
Sbjct: 104 SRHSLALSDWGQV--LSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL 161

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           AL    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++
Sbjct: 162 ALT---SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI 218

Query: 227 GQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            + G V  +GWGR  C  LG  +E   S P  ++ L  +    VA GD  +  ++ +G V
Sbjct: 219 SKSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 276

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           ++ G G    LGH           +N + P++V  L  +   + Q++  N      HT A
Sbjct: 277 FTCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLA 321

Query: 345 LTES-GKLYAFGAGDKGQLG 363
           L  S G++YAFG G  GQLG
Sbjct: 322 LVPSRGRVYAFGLGSSGQLG 341



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 19/261 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G+  ++ +SD GQV ++G +  G+  +     ++V  P++V  L    V
Sbjct: 92  LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTV 150

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLENIPVVQ 158
           VQ A GN  +  L+  G +Y  SWG++   +LG ++ PND+    +PL L TL  IP+  
Sbjct: 151 VQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAA 207

Query: 159 IAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           IA G  + +L++     SG AV+  G    G+LG    T+  +P  ++  + L ++   V
Sbjct: 208 IACGGNHSFLIS----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FV 260

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTT 275
           A G   +  +  +G V T G G YG LGHG    E +P++V  L       VA G+ +T 
Sbjct: 261 ACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTL 320

Query: 276 FVVSEDGDVYSFGCGESASLG 296
            +V   G VY+FG G S  LG
Sbjct: 321 ALVPSRGRVYAFGLGSSGQLG 341



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 24/228 (10%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K PR+     +  LQ  V
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPRMSPFLLIPELQDYV 96

Query: 216 V---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATG 271
           +     G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G
Sbjct: 97  IIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACG 156

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           +  +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I 
Sbjct: 157 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT---HCNY--PLRLTTL-------LGIP 204

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           L        H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 205 LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 249



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G  + GV     +T 
Sbjct: 133 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG--QLGVNSPNDLTH 190

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 191 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-L 249

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 250 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 304

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +   +P+VV
Sbjct: 305 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 90/211 (42%), Gaps = 21/211 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 232 VCTWGWGRYGCLGHG---NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           V   G   Y  LGH         S   ++  L D   I +  G   +  +S+ G V S+G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
             +   LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  
Sbjct: 121 DNDCGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSC 166

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           G+LY++G+   GQLG+   N+ T    P R+
Sbjct: 167 GELYSWGSNIYGQLGVNSPNDLTHCNYPLRL 197



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N + P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 237 LNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 296

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GRVY F  G+  +LG  +  + + P  +
Sbjct: 297 L--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354

Query: 148 LG 149
           +G
Sbjct: 355 IG 356


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L  I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G    +++ P +I+   LL +    +AAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS--LLGIPFAQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  ++    VP ++++L   K +H+  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   LVT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVT----------QITCGRQ-----HTTAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 19/266 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVE 96
           P +  +L    I+  + G   T+ ++D GQVYA+G  + G+   G+ GT + +  P+ ++
Sbjct: 75  PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIK 132

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           SL  I +VQ A G + +  LS+   V  FSWG +      LG+  +  +  PH ++ +L 
Sbjct: 133 SLSEIQIVQVACGYYHSLALSKGSEV--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLL 188

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            IP  QIAAG  +   L    SG A++  G    G+LG     D   P L++    L  Q
Sbjct: 189 GIPFAQIAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQ 242

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            VV +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +  G
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCG 302

Query: 272 -DYTTFVVSEDGDVYSFGCGESASLG 296
             +TT  V   G +YSFG G +  LG
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 28/312 (8%)

Query: 70  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
            +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT    +
Sbjct: 3   CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
             +LGH       E    +G L+   +V ++ G  + LAL  +     VY+ G    G+L
Sbjct: 63  LGQLGHEKARKRPEH---VGALDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLATDGQL 116

Query: 190 G-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           G  G+    + PR I+   L  +Q V VA G +H+  + +   V +WG  +YG LG G E
Sbjct: 117 GLPGTEECIRVPRNIK--SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE 174

Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + ++ P V+++L  +    +A G   +FV++  G ++ +G  +   LG N       +R
Sbjct: 175 YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DDNDR 230

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
           +     P L+ SL+   ++VV I          HT ALT+ G ++ FGAG  GQLG    
Sbjct: 231 YV----PTLLKSLR--TQKVVHICCGED-----HTAALTKEGGVFTFGAGGYGQLG---H 276

Query: 368 NNQTERGNPERV 379
           N+ +   NP +V
Sbjct: 277 NSTSHEINPRKV 288



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+        + V  P L++
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL+   VV    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + ++ V
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            QI  G  +  A    PS   +YS G G  G+LG G+ ++ K P  ++
Sbjct: 297 TQITCGRQHTTAFV--PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL  I+I+Q A G   ++ +S   +V+++G++ +G+   G +  K   SP +++
Sbjct: 127 VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIK 185

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  I   Q A G   + VL+  G +  F WG +   +LG + + ND     LL +L   
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQ 242

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+     
Sbjct: 243 KVVHICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVT 297

Query: 215 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            +  G  H  A V   GR+ ++G G  G LG G       P  V+
Sbjct: 298 QITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L  I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G    +++ P +I+   LL +    +AAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS--LLGIPFAQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  ++    VP ++++L   K +H+  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   LVT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVT----------QITCGRQ-----HTTAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 23/268 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVE 96
           P +  +L    I+  + G   T+ ++D GQVYA+G  + G+   G+ GT + +  P+ ++
Sbjct: 75  PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIK 132

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           SL  I +VQ A G + +  LS+   V  FSWG +      LG+  +  +  PH ++ +L 
Sbjct: 133 SLSEIQIVQVACGYYHSLALSKGSEV--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLL 188

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP  QIAAG  + ++L L    SG A++  G    G+LG     D   P L++    L 
Sbjct: 189 GIPFAQIAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LR 240

Query: 211 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            Q VV +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       + 
Sbjct: 241 TQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQIT 300

Query: 270 TG-DYTTFVVSEDGDVYSFGCGESASLG 296
            G  +TT  V   G +YSFG G +  LG
Sbjct: 301 CGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 28/312 (8%)

Query: 70  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
            +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT    +
Sbjct: 3   CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
             +LGH       E    +G L+   +V ++ G  + LAL  +     VY+ G    G+L
Sbjct: 63  LGQLGHEKARKRPEH---VGALDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLATDGQL 116

Query: 190 G-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           G  G+    + PR I+   L  +Q V VA G +H+  + +   V +WG  +YG LG G E
Sbjct: 117 GLPGTEECIRVPRNIK--SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE 174

Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + ++ P V+++L  +    +A G   +FV++  G ++ +G  +   LG N       +R
Sbjct: 175 YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DDNDR 230

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
           +     P L+ SL+   ++VV I          HT ALT+ G ++ FGAG  GQLG    
Sbjct: 231 YV----PTLLKSLR--TQKVVHICCGED-----HTAALTKEGGVFTFGAGGYGQLG---H 276

Query: 368 NNQTERGNPERV 379
           N+ +   NP +V
Sbjct: 277 NSTSHEINPRKV 288



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+        + V  P L++
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL+   VV    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + ++ V
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            QI  G  +  A    PS   +YS G G  G+LG G+ ++ K P  ++
Sbjct: 297 TQITCGRQHTTAFV--PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL  I+I+Q A G   ++ +S   +V+++G++ +G+   G +  K   SP +++
Sbjct: 127 VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIK 185

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  I   Q A G   + VL+  G +  F WG +   +LG + + ND     LL +L   
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQ 242

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+     
Sbjct: 243 KVVHICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVT 297

Query: 215 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            +  G  H  A V   GR+ ++G G  G LG G       P  V+
Sbjct: 298 QITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 150/324 (46%), Gaps = 35/324 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G++S G   +GV   K V  P+LVE+L +  V   A G F 
Sbjct: 284 ACGVRHASLVTRQGEVFTWGEESGGCLGHGV--GKNVVQPRLVEALTSTTVDFVACGEFH 341

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           +  ++  G +YT+  G  N   LGH ++ +   P  + G LE +   QIA   C     A
Sbjct: 342 SCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL---QIAFVACGPWHTA 398

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-- 228
              S   +++ G G  G LGHG R +  +PR +E   LL L+ + VA G WH A V +  
Sbjct: 399 LVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVES--LLGLRTIAVACGVWHTAAVVEVI 456

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++
Sbjct: 457 ATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLT 516

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           + G V++ G      LG N  +DG+         P L      V +++ + S+       
Sbjct: 517 KSGRVFTMGSTVYGQLG-NPQSDGK--------VPCL------VGDKIARESIEEIACGA 561

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 562 YHVAVLTSKNEVYTWGKGANGRLG 585



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 41/289 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G    ++++R+G V+T  WG ++   LGH    N V+P  L+ 
Sbjct: 269 PRPLESSVVLDVHHIACGVRHASLVTRQGEVFT--WGEESGGCLGHGVGKNVVQPR-LVE 325

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQ 205
            L +  V  +A G  +  A+      MA  +Y+ G G    G LGHGS      P+ I  
Sbjct: 326 ALTSTTVDFVACGEFHSCAVT-----MAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAG 380

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  LQ   VA G WH A+V   G++ T+G G +G LGHG+ +  S P+ V++L  ++ 
Sbjct: 381 -PLEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRT 439

Query: 266 IHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
           I VA G + T  V E            G ++++G G+   LGH       G++ A  L P
Sbjct: 440 IAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGH-------GDKEAR-LKP 491

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             V +L  ++    +I+  +S+     T  LT+SG+++  G+   GQLG
Sbjct: 492 TCVAAL--IDSNFHKIACGHSL-----TAGLTKSGRVFTMGSTVYGQLG 533



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 21/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   A G   T L++  GQ++ FG  +FG   +G +  + V+ P+ VESL  +  
Sbjct: 382 LEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRT 439

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 440 IAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVAALI 498

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNL 211
           +    +IA G+     L    SG  V+++G  + G+LG+  ++D K P L+ ++    ++
Sbjct: 499 DSNFHKIACGHSLTAGLT--KSGR-VFTMGSTVYGQLGN-PQSDGKVPCLVGDKIARESI 554

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           + +  A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 555 EEI--ACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 14/170 (8%)

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           R D   PR +E   +L++  +  A G  HA++V + G V TWG    GCLGHG  +    
Sbjct: 263 RADVLLPRPLESSVVLDVHHI--ACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQ 320

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           P++V+AL       VA G++ +  V+  G++Y++G G      HNA   G G+  ++ + 
Sbjct: 321 PRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGT-----HNAGLLGHGSDVSHWIP 375

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++   L+      +QI+      W  HT  +T +G+L+ FG G  G LG
Sbjct: 376 KRIAGPLEG-----LQIAFVACGPW--HTALVTSTGQLFTFGDGTFGVLG 418


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 144/324 (44%), Gaps = 36/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+ +++G++S G   +GV     +  P+L+++L    +   A G F 
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVACGEFH 371

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +  ++  G +YT+  G+   LGH  E +   P  +   LE I V  IA G  +   +   
Sbjct: 372 SCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT-- 429

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---- 228
            S   +++ G G  G LGHG +     PR ++   L  L+ V  A G WH A V +    
Sbjct: 430 -SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 229 --------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
                    G++ TWG G  G LGHGN+E + VP  V AL +     VA G   T  ++ 
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 546

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G VY+ G      L         GN HA+  TP  V       E  +  S    I   A
Sbjct: 547 SGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------EGKLHKSFVEEIACGA 590

Query: 341 -HTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 591 YHVAVLTSRTEVYTWGKGSNGRLG 614



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 40/303 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N  +P  L+ 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 355

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F L 
Sbjct: 356 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 411

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+++   +P+ V +L  ++ +  A
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 471

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       GN+    L P  V
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 523

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N+  +   P 
Sbjct: 524 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKTPN 572

Query: 378 RVD 380
           RV+
Sbjct: 573 RVE 575



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 410 LEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRT 467

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAAL 526

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    SG  VY++G  + G+LG+ S  D K P  +E  +L   
Sbjct: 527 VEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKS 581

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +A G
Sbjct: 582 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641

Query: 272 DYTTFVV 278
              T  V
Sbjct: 642 TNFTAAV 648



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 27/296 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V  P+ V  
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV--PKRVNF 408

Query: 98  L-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L + I V   A G + TAV++  G+++TF  G    LGH  + +   P  +  +L+ +  
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV-DSLKGLRT 467

Query: 157 VQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           V+ A G  +  A+     G           +++ G G  G+LGHG+    K P+L+    
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEPKLVPTCV 523

Query: 208 LLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              ++P        H+  V     G V T G   YG LG+ + + ++  +V   L+    
Sbjct: 524 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFV 583

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             +A G Y   V++   +VY++G G +  LGH  + D          +P LV SLK
Sbjct: 584 EEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVESLK 631



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 147/327 (44%), Gaps = 40/327 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+++++G++S G   +GV     V  PQL+E+L N  +   A G + 
Sbjct: 321 ACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPQLIEALSNTNIEFVACGEYH 378

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 379 TCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 436

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           ++   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 437 VS---SAGQLFTFGDGTFGVLGHGDRKSISLPREVE--SLKGLRTVQAACGVWHTAAVVE 491

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V AL +     VA G   T 
Sbjct: 492 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTI 551

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
             +  G VY+ G      LG N  +DG+         P       +V  ++ + S+    
Sbjct: 552 ARTTSGHVYTMGSPVYGQLG-NPQSDGK--------LPA------RVEGKLSRSSVEEIA 596

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
               H   LT   ++Y +G G  G+LG
Sbjct: 597 CGAYHVAVLTSKTEVYTWGKGANGRLG 623



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 128/247 (51%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T ++S AGQ++ FG  +FG   +G +  K ++ P+ VESLK +  
Sbjct: 419 LEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDR--KSISLPREVESLKGLRT 476

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           VQAA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 477 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVSAL 535

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   L +A   SG  VY++G  + G+LG+  ++D K P  +E  +L   
Sbjct: 536 VEPNFCQVACGHS--LTIARTTSGH-VYTMGSPVYGQLGN-PQSDGKLPARVEG-KLSRS 590

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ + +++P +V+AL D +   +A G
Sbjct: 591 SVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACG 650

Query: 272 DYTTFVV 278
              T  +
Sbjct: 651 TNFTAAI 657



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 44/320 (13%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           +GV+   L+  P+ +ES   + V   A G    A+++++G +  FSWG ++  RLGH  +
Sbjct: 297 FGVKMDSLL--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 352

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTD 196
            + + P  L+  L N  +  +A G  +  A+    SG  +Y+ G G    G LGHG+   
Sbjct: 353 SDVLHPQ-LIEALSNTNIEFVACGEYHTCAVTL--SG-DLYTWGDGTYNFGLLGHGNEVS 408

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ 
Sbjct: 409 HWVPKRVNG-PLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPRE 467

Query: 257 VQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQ 304
           V++L  ++ +  A G + T  V E             G ++++G G+   LGH       
Sbjct: 468 VESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------- 520

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           G++ A  L P  V++L + N    Q++  +S+     T A T SG +Y  G+   GQLG 
Sbjct: 521 GDKEAK-LVPTCVSALVEPN--FCQVACGHSL-----TIARTTSGHVYTMGSPVYGQLG- 571

Query: 365 ELVNNQTERGNPERVDIDLS 384
              N Q++   P RV+  LS
Sbjct: 572 ---NPQSDGKLPARVEGKLS 588


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 28/337 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           L  E    P   RS   + ++  A G   T+ +   G+V + G + +G+  +     K  
Sbjct: 27  LEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGH----EKPC 82

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLL 148
             P L++SL    V+QA+ G   + VL+  G+V+T+    D +LG    +        ++
Sbjct: 83  KRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMV 142

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L +  VVQ+A G  + + L    +   +Y+ G    G+LG  ++T +  P+ +     
Sbjct: 143 RGLADHKVVQVACGSAHTVGLT---ATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISG 199

Query: 209 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L   P+V VAAGA H  V+   G +  WG   +G LG G+++    P +V+ L +     
Sbjct: 200 L---PIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICA 256

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           +A GD  +  ++ DG V++FG G    LGHN           N L P+ V  L  +   V
Sbjct: 257 LACGDDHSLALTRDGGVFTFGAGMYGQLGHNT--------SNNELLPRKVFEL--MGSSV 306

Query: 328 VQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
            QI+         H+ A +  SG++Y FG G  GQLG
Sbjct: 307 TQIACGRK-----HSIAYVPSSGRVYVFGLGGNGQLG 338



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 6/205 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L  +     P +   + G+ I++ AAGA   ++++ +G ++A+G +SFG  + GV
Sbjct: 177 HGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG--QLGV 234

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
              +   +P LV++L+N  +   A G+  +  L+R+G V+TF  G   +LGH+T  N++ 
Sbjct: 235 GDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELL 294

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  +   L    V QIA G  +  ++A  PS   VY  G G  G+LG GS  +   P ++
Sbjct: 295 PRKVF-ELMGSSVTQIACGRKH--SIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    +     VV  GA H +  GQ
Sbjct: 352 KG-PFVAFGAEVVDKGAIHFSQHGQ 375



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 25/305 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V  +G  + G+   G    + VT P+ + S  N+ VV  A G   T  + ++GRV +   
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       +   L+ +L    V+Q ++G  +   L        V++ G     
Sbjct: 71  NDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLT---DAGQVFTWGSNEDN 124

Query: 188 KLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG G         PR++    L + + V VA G+ H   +   G++ TWG   +G LG 
Sbjct: 125 QLGRGQVDSASTSIPRMVRG--LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            N+  ++ P+ V  ++ +  + VA G     V++  G ++++GC     LG   + D Q 
Sbjct: 183 ANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG---VGDDQ- 238

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R A    P LV +L+  N+ +  ++  +      H+ ALT  G ++ FGAG  GQLG  
Sbjct: 239 DRGA----PTLVKTLR--NQGICALACGDD-----HSLALTRDGGVFTFGAGMYGQLGHN 287

Query: 366 LVNNQ 370
             NN+
Sbjct: 288 TSNNE 292



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 22/195 (11%)

Query: 187 GKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           G+LG G   +E    PR I  F   N++ V +A G  H   V +DGRV + G   YG LG
Sbjct: 20  GQLGLGGLEEETVTLPREIRSF--CNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLG 77

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           H  + C+  P ++ +L +   +  ++G   + V+++ G V+++G  E   LG   +    
Sbjct: 78  H-EKPCKR-PALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDS-- 133

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
               A+   P++V  L   + +VVQ++       +AHT  LT +G++Y +G+ + GQLG+
Sbjct: 134 ----ASTSIPRMVRGL--ADHKVVQVACG-----SAHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 365 ELVNNQTERGNPERV 379
               N+T +  P+ V
Sbjct: 183 A---NKTPQNEPQWV 194


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L +  G+V+A+G++  G   +G      ++ P+LVE+L    V   
Sbjct: 243 LDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEALAVSNVEYV 300

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH    +   P  + G LE + V+ ++ G
Sbjct: 301 ACGEFHTCAITASGDLYT--WGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCG 358

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   V++ G G  G LGHG+R    +P+ +E   L   + + VA G WH
Sbjct: 359 SWHS---ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVET--LSGFRTIKVACGLWH 413

Query: 223 AAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A +     Q G      ++ TWG G    LGHG+++   VP  VQ+L D     VA G 
Sbjct: 414 SAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGH 473

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  +S  G V++ G   +  LG N  +DG   +H   +  +L   L      V +IS 
Sbjct: 474 SMTIALSTSGHVFTMGSSSNGQLG-NPKSDG---KHPTPVQDRLAGEL------VEEISC 523

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + H   LT   ++Y +G G  G+LG
Sbjct: 524 G-----SCHVAVLTSRSEVYTWGMGANGRLG 549



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 153/322 (47%), Gaps = 43/322 (13%)

Query: 62  ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           I   G VY +G+       + G A Y      ++  P+ +ES   + V Q A G    A+
Sbjct: 199 IESLGDVYVWGEVWTDMIPAEGSANYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 257

Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            +R+G V  F+WG +   RLGH T+ +   P  L+  L    V  +A G  +  A+    
Sbjct: 258 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYVACGEFHTCAIT--- 311

Query: 174 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           +   +Y+ G G    G LGHG+ T    P+ +    L  +Q + V+ G+WH+A+    G+
Sbjct: 312 ASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 370

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 283
           V T+G G +G LGHGN    + PK V+ L+  + I VA G + +  + E  +        
Sbjct: 371 VFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430

Query: 284 --VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
             ++++G G+   LGH       G++ A  L P  V SL   N    Q++  +S+     
Sbjct: 431 RKLFTWGAGDKNPLGH-------GDKDAR-LVPTCVQSLIDYN--FHQVACGHSM----- 475

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T AL+ SG ++  G+   GQLG
Sbjct: 476 TIALSTSGHVFTMGSSSNGQLG 497



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  + G+  + L + +G+V+ FG  +FG   +G + T  V  P+ VE+L     
Sbjct: 347 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHT--VAYPKEVETLSGFRT 404

Query: 104 VQAAIGNFFTA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + +A            V+SR  +++T+  G+   LGH  +   + P   + +L
Sbjct: 405 IKVACGLWHSAAIVETTNQAGVNVISR--KLFTWGAGDKNPLGHGDKDARLVP-TCVQSL 461

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL+   +   V+++G    G+LG+  ++D KHP  + Q +L   
Sbjct: 462 IDYNFHQVACGHSMTIALS---TSGHVFTMGSSSNGQLGN-PKSDGKHPTPV-QDRLAGE 516

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ G+ H AV+     V TWG G  G LGHG  E +  P +V+AL D     +A G
Sbjct: 517 LVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACG 576

Query: 272 -DYTTFV 277
            ++TT +
Sbjct: 577 SNFTTCI 583


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L  I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G    +++ P +I+   LL +    +AAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS--LLGIPFAQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  ++    VP ++++L   K +H+  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   LVT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSLVT----------QITCGRQ-----HTTAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGN 344



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 19/266 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVE 96
           P +  +L    I+  + G   T+ ++D GQVYA+G  + G+   G+ GT + +  P+ ++
Sbjct: 75  PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIK 132

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           SL  I +VQ A G + +  LS+   V  FSWG +      LG+  +  +  PH ++ +L 
Sbjct: 133 SLSEIQIVQVACGYYHSLALSKGSEV--FSWGQNKYGQLGLGYEYKKQN-SPH-VIKSLL 188

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            IP  QIAAG  +   L    SG A++  G    G+LG     D   P L++    L  Q
Sbjct: 189 GIPFAQIAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRTQ 242

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            VV +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +  G
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCG 302

Query: 272 -DYTTFVVSEDGDVYSFGCGESASLG 296
             +TT  V   G +YSFG G +  LG
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 28/312 (8%)

Query: 70  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
            +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT    +
Sbjct: 3   CWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
             +LGH       E    +G L+   +V ++ G  + LAL  +     VY+ G    G+L
Sbjct: 63  LGQLGHEKARKRPEH---VGALDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLATDGQL 116

Query: 190 G-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           G  G+    + PR I+   L  +Q V VA G +H+  + +   V +WG  +YG LG G E
Sbjct: 117 GLPGTEECIRVPRNIK--SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE 174

Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + ++ P V+++L  +    +A G   +FV++  G ++ +G  +   LG N       +R
Sbjct: 175 YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DDNDR 230

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
           +     P L+ SL+   ++VV I          HT ALT+ G ++ FGAG  GQLG    
Sbjct: 231 YV----PTLLKSLR--TQKVVHICCGED-----HTAALTKEGGVFTFGAGGYGQLG---H 276

Query: 368 NNQTERGNPERV 379
           N+ +   NP +V
Sbjct: 277 NSTSHEINPRKV 288



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+        + V  P L++
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV--PTLLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL+   VV    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + ++ V
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            QI  G  +  A    PS   +YS G G  G+LG G+ ++ K P  ++
Sbjct: 297 TQITCGRQHTTAFV--PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 12/224 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL  I+I+Q A G   ++ +S   +V+++G++ +G+   G +  K   SP +++S
Sbjct: 128 PRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK-QNSPHVIKS 186

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  I   Q A G   + VL+  G +  F WG +   +LG + + ND     LL +L    
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQK 243

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      
Sbjct: 244 VVHICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQ 298

Query: 216 VAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           +  G  H  A V   GR+ ++G G  G LG G       P  V+
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 144/324 (44%), Gaps = 36/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+ +++G++S G   +GV     +  P+L+++L    +   A G F 
Sbjct: 301 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVACGEFH 358

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +  ++  G +YT+  G+   LGH  E +   P  +   LE I V  IA G  +   +   
Sbjct: 359 SCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT-- 416

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---- 228
            S   +++ G G  G LGHG +     PR ++   L  L+ V  A G WH A V +    
Sbjct: 417 -SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAACGVWHTAAVVEVMVG 473

Query: 229 --------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
                    G++ TWG G  G LGHGN+E + VP  V AL +     VA G   T  ++ 
Sbjct: 474 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 533

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G VY+ G      L         GN HA+  TP  V       E  +  S    I   A
Sbjct: 534 SGHVYTMGSPVYGQL---------GNSHADGKTPNRV-------EGKLHKSFVEEIACGA 577

Query: 341 -HTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 578 YHVAVLTSRTEVYTWGKGSNGRLG 601



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 40/303 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N  +P  L+ 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 342

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F L 
Sbjct: 343 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 398

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+++   +P+ V +L  ++ +  A
Sbjct: 399 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 458

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       GN+    L P  V
Sbjct: 459 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 510

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N+  +   P 
Sbjct: 511 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKTPN 559

Query: 378 RVD 380
           RV+
Sbjct: 560 RVE 562



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 397 LEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRT 454

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 455 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAAL 513

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    SG  VY++G  + G+LG+ S  D K P  +E  +L   
Sbjct: 514 VEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGN-SHADGKTPNRVEG-KLHKS 568

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +A G
Sbjct: 569 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 628

Query: 272 DYTTFVV 278
              T  V
Sbjct: 629 TNFTAAV 635



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 27/296 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V  P+ V  
Sbjct: 338 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV--PKRVNF 395

Query: 98  L-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L + I V   A G + TAV++  G+++TF  G    LGH  + +   P  +  +L+ +  
Sbjct: 396 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV-DSLKGLRT 454

Query: 157 VQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           V+ A G  +  A+     G           +++ G G  G+LGHG+    K P+L+    
Sbjct: 455 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEPKLVPTCV 510

Query: 208 LLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              ++P        H+  V     G V T G   YG LG+ + + ++  +V   L+    
Sbjct: 511 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFV 570

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             +A G Y   V++   +VY++G G +  LGH  + D          +P LV SLK
Sbjct: 571 EEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVESLK 618



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 280 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 337

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 338 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 390

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 391 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 433


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G     ++  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E +  E    +G L    +V +A G  + +AL+ Q     ++S G G  G
Sbjct: 61  NTKGQLGHDCEGSKPEQ---IGALAGQHIVHVACGESHSVALSDQGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   YG LG 
Sbjct: 115 QLGLTTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRSQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+ + +L    +V  A 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSK----PEQIGALAGQHIVHVAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA   +    ++ G    G+LG G     +  P+ ++    + L    VAAG  H+  + 
Sbjct: 152 LA---ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL--AQVAAGGAHSFALS 206

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E     P  V+ L   K ++++ G+  T V+++ G V++F
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH+++ D    R            L+ +   V QI+         HT A   
Sbjct: 267 GAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVSQIACGRH-----HTLAFVP 311

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G +GQLG
Sbjct: 312 SSGMIYAFGCGTRGQLG 328



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG +  G+ P    +L G  I+  A G   ++ +SD GQ++++G  S G+   G+   + 
Sbjct: 66  LGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQL--GLTTIED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            VT P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 AVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L+ IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VKSLDGIPLAQVAAGGAHSFALSL--SG-AVFGWGKNSSGQLGLSDERDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATGDYTTF-VVSEDGDVYSFGCGESASLG 296
             +A G + T   V   G +Y+FGCG    LG
Sbjct: 297 SQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL GI + Q AAG   +  +S +G V+ +GK+S G+   G+   +
Sbjct: 171 LGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL--GLSDER 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L++  VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 289 L-ELMGSEVSQIACGRHHTLAFV--PSSGMIYAFGCGTRGQLGTGHTCNVKCP 338


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GYC+ L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G   +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYCHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDSDGQLGL 118


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 42/327 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G+   ++++  GQ++++G+ S G+  +G      V+ P+++++L    VV  A G F 
Sbjct: 304 ACGSKHAVIVTKQGQIFSWGESSGGKLGHGADAD--VSQPKVIDALSESNVVLVACGEFH 361

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+D      LGH +  +   P  ++G +E++ +  ++ G  +  A
Sbjct: 362 TCAVTVSGNLYT--WGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAA 419

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-- 226
           ++ Q     +++ G G  G LGHG R+    PR +E  +   L+ + V+ G WH A V  
Sbjct: 420 VSSQGK---LFTFGDGTFGALGHGDRSSTSKPREVESLK--GLRTLKVSCGIWHTAAVID 474

Query: 227 ----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+EE   VP  V     V    VA     T 
Sbjct: 475 FINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGV--CQVACAHSMTI 532

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G  +   LG +  + G+   H         T     N  + QI+  +  
Sbjct: 533 ALTVLGQVYTMGAADYGQLG-SPCSVGKLPIH---------TDGDIRNCHIKQIACGSH- 581

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
               H  AL+ +G +Y +G G  GQLG
Sbjct: 582 ----HVVALSSNGDVYTWGKGINGQLG 604



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 42/302 (13%)

Query: 81  YGVQGTKLVTSPQLV-ESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDA--RLG 134
           Y V+ + ++    L+ ++L  I  + A I   G+    +++++G++  FSWG  +  +LG
Sbjct: 274 YDVKSSPIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQI--FSWGESSGGKLG 331

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           H  + +  +P  ++  L    VV +A G  +  A+      +  +       G LGHGS 
Sbjct: 332 HGADADVSQPK-VIDALSESNVVLVACGEFHTCAVTVS-GNLYTWGDDTHNTGYLGHGSA 389

Query: 195 TDEKHPR-LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
                PR +I Q + + +    V+ G WH A V   G++ T+G G +G LGHG+    S 
Sbjct: 390 VSHWIPREVIGQIESVRIS--FVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSK 447

Query: 254 PKVVQALNDVKAIHVATGDYTTFVV------------SEDGDVYSFGCGESASLGHNAIA 301
           P+ V++L  ++ + V+ G + T  V            S  G ++++G GE   LGH    
Sbjct: 448 PREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGH---- 503

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
              G+       P+LV S   +   V Q++  +S+     T ALT  G++Y  GA D GQ
Sbjct: 504 ---GDEE-----PRLVPSCVSMPAGVCQVACAHSM-----TIALTVLGQVYTMGAADYGQ 550

Query: 362 LG 363
           LG
Sbjct: 551 LG 552



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 26/249 (10%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++ +RI   + G   T  +S  G+++ FG  +FG   +G + +   + P+ VESLK +  
Sbjct: 402 IESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSS--TSKPREVESLKGLRT 459

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ + G + TA +            S  G+++T+  G   +LGH     D EP  L+ + 
Sbjct: 460 LKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGH----GDEEPR-LVPSC 514

Query: 152 ENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            ++P  V Q+A  +   +AL        VY++G    G+LG       K P +     + 
Sbjct: 515 VSMPAGVCQVACAHSMTIALTVLGQ---VYTMGAADYGQLGSPCSVG-KLP-IHTDGDIR 569

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N     +A G+ H   +  +G V TWG G  G LGHG+ +    P +V+AL   +   V 
Sbjct: 570 NCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVV 629

Query: 270 TGDYTTFVV 278
            G   T V+
Sbjct: 630 CGSNFTAVI 638


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+   G     +V  PQ    + +  V + A G      L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ Q     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNQPEQ---IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 156/337 (46%), Gaps = 32/337 (9%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R +   P  C  +    + + A G    + + + G+VY  G ++ G+  +  +G +    
Sbjct: 19  RGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ---- 74

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ + +L +  ++  A G   +  LS +G+++++  G+D +LG  T  + V    L+  L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQ 207
               ++Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   
Sbjct: 135 NQQTILQVSCGNWHCLALA---TDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 191

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L       VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++
Sbjct: 192 LAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           ++ G+  T V+++ G V++FG G    LGH+++ D    R            L+ +   V
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEV 296

Query: 328 VQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
            QI+         HT A    SG +YAFG G +GQLG
Sbjct: 297 TQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ--LGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GYC+ L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G   +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYCHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDSDGQLGL 118


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + GTL+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 159/310 (51%), Gaps = 38/310 (12%)

Query: 56  AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           +G   ++S+  +VY +G +S  +   G Q  + +  P+L     +   ++A  G + T V
Sbjct: 362 SGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPCFSDAQTIEA--GQYCTFV 417

Query: 116 LSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLA 168
           +S +G V     G+  RLG     N         EPH    +++ +   + + G+     
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----T 470

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           LA    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +
Sbjct: 471 LAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSF 287
           DG + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SF
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSF 586

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT 
Sbjct: 587 GGGDNGKLGH-----GDTNR---VYKPKVVEALQGMFTRKVCAGSQSSL-------ALTS 631

Query: 348 SGKLYAFGAG 357
           +G++YA+G G
Sbjct: 632 TGQVYAWGCG 641



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++ +L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGTLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q +  +   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4056 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4113

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE + + Q+
Sbjct: 4114 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQV 4172

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4173 ACGLNHTLAVSA--DGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4228

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P++V  L  +    +A G   T  +S
Sbjct: 4229 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALS 4288

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              G+VY++G      LG           H N V  P LVT+L+  N R +     +S  W
Sbjct: 4289 ASGEVYAWGSNSEGQLGLG---------HTNHVREPTLVTALQGKNIRQISAGRCHSAAW 4339

Query: 339  NA 340
             A
Sbjct: 4340 TA 4341



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4069

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4070 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4127

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   +   +++ G G  G+LG G+ +++K P  +   + L++  V  A G  H   V 
Sbjct: 4128 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQV--ACGLNHTLAVS 4183

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4184 ADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4243

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQLV  L       + I + +      HT AL+
Sbjct: 4244 F--GQDRLIG---LPEGRARNHNR---PQLVPVL-------LGIFIDDIAVGAEHTLALS 4288

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             SG++YA+G+  +GQLG+   N+  E
Sbjct: 4289 ASGEVYAWGSNSEGQLGLGHTNHVRE 4314



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4030 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4089

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4090 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4147

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+ ++   V   L        HT A++  G L +AFG 
Sbjct: 4148 -----GLGNT-SNKKLPERVTALEGLHIGQVACGLN-------HTLAVSADGSLVWAFGD 4194

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4195 GDYGKLGL---GNSTAKSSPQKVDV 4216



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 15/232 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  
Sbjct: 507 TLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN-- 562

Query: 103 VVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           V + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ +   ++ A
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFTRKVCA 621

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           G    LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G 
Sbjct: 622 GSQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGD 674

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
            H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 675 SHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4106 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4163

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+ + + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4164 LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGI 4222

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+L+    LL +    +
Sbjct: 4223 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQLVP--VLLGIFIDDI 4277

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A GA H   +   G V  WG    G LG G+      P +V AL       ++ G
Sbjct: 4278 AVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAG 4332



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4198 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4257

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQLV  L  IF+   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 4258 RNH--NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVY--AWGSNSEGQLGLGH---TN 4310

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4311 HVREPTLVTALQGKNIRQISAGRCHSAAWTAAP 4343



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+   +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQV 742


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 38/340 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   RSL  + + Q A G     L++  G+V+++G++S G   +GV     V  PQL++S
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDAD--VAHPQLIDS 171

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIP 155
           L +  V   A G + +  +++ G +YT+  G  N   LGH    +   P  + G LE + 
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVR 231

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A G  + + +    S   ++S G G  G LGHG R     PR +E   L  L+ + 
Sbjct: 232 VSSVACGPWHTVLVT---STGQLFSFGDGTFGVLGHGDRKSASMPREVE--SLKGLKTLR 286

Query: 216 VAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            A G WH A V +             G++ TWG G    LGHG++E + VP  V AL D 
Sbjct: 287 AACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDH 346

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               VA G   T  ++  G +Y+ G     S+ +  + D Q        T +L   L+  
Sbjct: 347 NFRQVACGHSLTVALTTTGHLYTMG-----SVSYGQLGDPQA-------TGRLPGVLRLG 394

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              + ++S     Y   H  ALT  G +  +G G  G+LG
Sbjct: 395 RTLIEEVSC--GAY---HVAALTSKGDVCTWGKGANGRLG 429



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 22/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+R+   A G   T+L++  GQ+++FG  +FG   +G +  K  + P+ VESLK +  
Sbjct: 227 LEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDR--KSASMPREVESLKGLKT 284

Query: 104 VQAAIGNFFTA----VLSR--------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++AA G + TA    V+SR         G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 285 LRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVP-TCVAAL 343

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL    +   +Y++G    G+LG    T     RL    +L   
Sbjct: 344 VDHNFRQVACGHSLTVALT---TTGHLYTMGSVSYGQLGDPQATG----RLPGVLRLGRT 396

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               V+ GA+H A +   G VCTWG G  G LGHG+ E   VP +V+AL D +   V+ G
Sbjct: 397 LIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCG 456

Query: 272 DYTTFVV 278
              T  +
Sbjct: 457 SSFTSAI 463



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 14/176 (7%)

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           KL    RTD   PR +    +L++Q   +A G  HAA+V + G V +WG    G LGHG 
Sbjct: 102 KLDTSFRTDAFLPRAVRSLVVLDVQ--QIACGVRHAALVTRQGEVFSWGEESGGRLGHGV 159

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
           +   + P+++ +L      +VA G+Y +  V++ GD+Y++G G      HN    G GN 
Sbjct: 160 DADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGT-----HNFGLLGHGNN 214

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++  TP+ V    +     V++S      W  HT  +T +G+L++FG G  G LG
Sbjct: 215 ISH-WTPKRVGGPLE----GVRVSSVACGPW--HTVLVTSTGQLFSFGDGTFGVLG 263


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 153/319 (47%), Gaps = 32/319 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++  G+VYA G + + +  + +   +    P L+  L++  ++Q   G+
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGS 99

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  LS  G+V   SWG++   +LGH T+   V+   ++  L    VVQIA G  + LA
Sbjct: 100 RHSLALSDWGQV--LSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA 157

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++ 
Sbjct: 158 LT---SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + G V  +GWGR  C  LG  +E   S P  ++ L  +    VA GD  +  ++ +G V+
Sbjct: 215 KSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 272

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH           +N + P++V  L  +   + Q++  N      HT AL
Sbjct: 273 TCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLAL 317

Query: 346 TES-GKLYAFGAGDKGQLG 363
             S G++YAFG G  GQLG
Sbjct: 318 VPSRGRVYAFGLGSSGQLG 336



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 137/267 (51%), Gaps = 19/267 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL    LQ   IIQ   G+  ++ +SD GQV ++G +  G+  +     ++V  P++V  
Sbjct: 81  PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQ 139

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLE 152
           L    VVQ A GN  +  L+  G +Y  SWG++   +LG ++ PND+    +PL L TL 
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLL 196

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP+  IA G  + +L++     SG AV+  G    G+LG    T+  +P  ++  + L 
Sbjct: 197 GIPLAAIACGGNHSFLIS----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG 251

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           ++   VA G   +  +  +G V T G G YG LGHG    E +P++V  L       VA 
Sbjct: 252 VR--FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVAC 309

Query: 271 GD-YTTFVVSEDGDVYSFGCGESASLG 296
           G+ +T  +V   G VY+FG G S  LG
Sbjct: 310 GNRHTLALVPSRGRVYAFGLGSSGQLG 336



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K P LI + Q  +   + 
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 274
           +  G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G+  
Sbjct: 95  ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I L  
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDL---THCNY--PLRLTTL-------LGIPLAA 202

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G  + GV     +T 
Sbjct: 128 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG--QLGVNSPNDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  +     P ++  L D   I +  G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N + P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GRVY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L    V
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQV 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D         + P+ V  L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMND--------EVNPRRV--LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 14/275 (5%)

Query: 27  RNLLGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           +  LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  
Sbjct: 63  KGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMT 120

Query: 86  TK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVE 143
           T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   
Sbjct: 121 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 180

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  +  +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +
Sbjct: 181 PQRVR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 204 EQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
              +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L  
Sbjct: 237 ---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 263 VKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L    V
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQV 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D         + P+ V  L  +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMND--------EVNPRRVLEL--MGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 138/275 (50%), Gaps = 14/275 (5%)

Query: 27  RNLLGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           +  LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S  + + G+  
Sbjct: 63  KGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS--DGQLGLMT 120

Query: 86  TK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVE 143
           T+  V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   
Sbjct: 121 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 180

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  +  +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +
Sbjct: 181 PQRVR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 204 EQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
              +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L  
Sbjct: 237 ---KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 263 VKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +   +A G  +T   V   G +Y+FGCG    LG
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 153/319 (47%), Gaps = 32/319 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++  G+VYA G + + +  + +   +    P L+  L++  ++Q   G+
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKR----PLLIPELQDYVIIQICCGS 99

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  LS  G+V   SWG++   +LGH T+   V+   ++  L    VVQIA G  + LA
Sbjct: 100 RHSLALSDWGQV--LSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA 157

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++ 
Sbjct: 158 LT---SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + G V  +GWGR  C  LG  +E   S P  ++ L  +    VA GD  +  ++ +G V+
Sbjct: 215 KSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 272

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH           +N + P++V  L  +   + Q++  N      HT AL
Sbjct: 273 TCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLAL 317

Query: 346 TES-GKLYAFGAGDKGQLG 363
             S G++YAFG G  GQLG
Sbjct: 318 VPSRGRVYAFGLGSSGQLG 336



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 137/267 (51%), Gaps = 19/267 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL    LQ   IIQ   G+  ++ +SD GQV ++G +  G+  +     ++V  P++V  
Sbjct: 81  PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQ 139

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLE 152
           L    VVQ A GN  +  L+  G +Y  SWG++   +LG ++ PND+    +PL L TL 
Sbjct: 140 LVTKTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLL 196

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP+  IA G  + +L++     SG AV+  G    G+LG    T+  +P  ++  + L 
Sbjct: 197 GIPLAAIACGGNHSFLIS----KSG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG 251

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           ++   VA G   +  +  +G V T G G YG LGHG    E +P++V  L       VA 
Sbjct: 252 VR--FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVAC 309

Query: 271 GD-YTTFVVSEDGDVYSFGCGESASLG 296
           G+ +T  +V   G VY+FG G S  LG
Sbjct: 310 GNRHTLALVPSRGRVYAFGLGSSGQLG 336



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+A G+ + L L    +   VY+ G     +LGH   T  K P LI + Q  +   + 
Sbjct: 42  VQQVACGHRHTLFLT---ATGKVYACGSNDYSQLGHDLPT--KRPLLIPELQ--DYVIIQ 94

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYT 274
           +  G+ H+  +   G+V +WG    G LGH  ++E   +PKVV+ L     + +A G+  
Sbjct: 95  ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 154

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++  G++YS+G      LG N+  D     H N   P  +T+L       + I L  
Sbjct: 155 SLALTSCGELYSWGSNIYGQLGVNSPNDL---THCNY--PLRLTTL-------LGIPLAA 202

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 H+F +++SG ++ +G  + GQLG+   N++T R  P ++
Sbjct: 203 IACGGNHSFLISKSGAVFGWGRNNCGQLGL---NDETNRSYPTQL 244



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G  + GV     +T 
Sbjct: 128 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG--QLGVNSPNDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +   G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTATGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  +     P ++  L D   I +  G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             V  P++V  L  V + VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VTKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+   N+ T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRL 192



 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N + P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GRVY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 41/357 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S Q + +   + G     +++  G+V+++GK+  G   + V  +  V  P+++ES
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 316

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 153
           L    V   A G   T  L+  G +  F WG     LG      + +   PH L G LE 
Sbjct: 317 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 374

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + VV++A G  +   ++   S   +++ G G  G LGHG  +    P+ +E  + L ++ 
Sbjct: 375 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 430

Query: 214 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
             VA G WH A + +           G++ TWG    G LGH ++E + VP  V+AL D 
Sbjct: 431 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 489

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V+     T  ++  G V++ G  E   LG + + D   +   +V  P     LK  
Sbjct: 490 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD---SSICSVEGP-----LK-- 539

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            E V +IS  +S     H   LT +GK++ +G G +GQLG+    N  +R +P  V+
Sbjct: 540 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 588



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+ +++ A G   T +IS +GQ++ +G  +FG   +G   T  V  P+ VESLK + V
Sbjct: 372 LEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRV 429

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +          +  G+++T+   +  +LGH  + + + P   +  L +
Sbjct: 430 KAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTD 488

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q++      +AL    +G+ V+++G    G+LG   R D+     +E    L  + 
Sbjct: 489 SDFAQVSCAKALTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEF 542

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           V  +++G+ H AV+  +G+V TWG G  G LG GN    S P +V+AL D +   +A G 
Sbjct: 543 VREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGS 602

Query: 273 YTTFVV 278
             T  V
Sbjct: 603 NFTVAV 608



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 146
           V+ P+L+ S + + V   + G    A+++++G V  FSWG +   RLGH      + P  
Sbjct: 256 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 312

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 203
           ++ +L    V  IA G  +  ALA   SG  ++  G G   LG       R+     +L 
Sbjct: 313 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 369

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              + +++  V +A G WH A++   G++ T+G G +G LGHG+    + PK V++L  +
Sbjct: 370 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 427

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +   VA G + T  + E           G ++++G  +   LGH   +D +       L 
Sbjct: 428 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 479

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           P  V +L   +    Q+S   ++     T ALT +G ++  G+ + GQLG   +++ +
Sbjct: 480 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 530


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       ++    + +L +I +VQIA GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G     +  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQIACGYYHSLALSKGSEV--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDTDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  G+    K PR I+   L ++Q V +A G +H+  + +   V +WG  ++G LG G
Sbjct: 115 QLGLPGTEEYIKVPRNIK--SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + +S P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N   D   
Sbjct: 173 FELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-- 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 231 ------FVPNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 30  LGREVNG--TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG E+     P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  +
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +
Sbjct: 231 FV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + +I V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 289 FELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ Q     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDQGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       ++    + +L +I +VQIA GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G     +  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL--GLPGTEEYIKVPRNIKSLTDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQIACGYYHSLALSKGSEV--FSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDTDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  G+    K PR I+   L ++Q V +A G +H+  + +   V +WG  ++G LG G
Sbjct: 115 QLGLPGTEEYIKVPRNIK--SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + +S P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N   D   
Sbjct: 173 FELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-- 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 231 ------FVPNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 30  LGREVNG--TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG E+     P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  +
Sbjct: 171 LGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +
Sbjct: 231 FV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + +I V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 289 FELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 165/349 (47%), Gaps = 39/349 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTK-LVTSPQLV 95
           P   ++L   R+++ A G   ++ ++D G+VY +G+     +++ G++ T  L+  P + 
Sbjct: 78  PNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMS 137

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--------------ARLGHHTEPND 141
           +        Q+ I N  +  L+ E  +Y  + GN+                +G   + N 
Sbjct: 138 KP-----KYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQ 192

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  + G L N  V+ I+AG+ +  + A   SG  +++ G    G+LG   R     P+
Sbjct: 193 TTPIQVQGLLANEEVIDISAGWAF--SAAVTKSG-KIFTWGFNEKGQLGLKHRWFNSSPQ 249

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-- 259
           L++   LL+++ V V+ G  H   V +DG + TWG G +G LGH N +    PK V A  
Sbjct: 250 LVKT--LLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFS 307

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQ 315
           LN ++   V+ G   T V+  +  +Y+FG GE A LG       +  G  + H    +P+
Sbjct: 308 LNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPK 367

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           +V +L+    + V          + HT ALTE  ++Y +G G  G LG+
Sbjct: 368 VVEALEDKKIKYVTCG-------HLHTLALTEDNEVYVWGWGSSGCLGL 409



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 44/362 (12%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N +NG+  +   + +  P    SL+G  I+  ++G    + +S  G VY++G+    E +
Sbjct: 8   NNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK--EGQ 65

Query: 81  YGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-----NDARLG 134
            GV    L  T P L+++L +  VV+ A GNF +  L+ +GRVY   WG     +D++ G
Sbjct: 66  LGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVY--EWGQLHKIDDSKTG 123

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
                N +   P +   +   +++ +    YL           +Y    G        S 
Sbjct: 124 LEA-TNGLLEMPGMSKPKYQSIIENSVSQ-YL------NGEKEIYDSTSGNNDDDDEAST 175

Query: 195 TDE---KHP-RLIEQFQ---------LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           +++   KH  ++I+  Q         L N + + ++AG   +A V + G++ TWG+   G
Sbjct: 176 SEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKG 235

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LG  +    S P++V+ L DVK + V+ G      V+EDGD+Y++G G    LGH+ + 
Sbjct: 236 QLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNV- 294

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
                   + L P+ V +      +V Q+S  ++      T  L  +  LYAFG G+  Q
Sbjct: 295 -------KSYLHPKKVAAFSLNGIQVSQVSCGSNF-----TMVLGRNQILYAFGHGEYAQ 342

Query: 362 LG 363
           LG
Sbjct: 343 LG 344



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 90  TSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           T+P  V+ L  N  V+  + G  F+A +++ G+++T+ +    +LG      +  P  L+
Sbjct: 193 TTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ-LV 251

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL ++ +V ++ G  ++ A+        +Y+ G G+ G+LGH +     HP+ +  F L
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVT---EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSL 308

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------------SVPK 255
             +Q   V+ G+    V+G++  +  +G G Y  LG   EE +             S PK
Sbjct: 309 NGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLG-ATEETQHLDMGSRDNHFKYSSPK 367

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           VV+AL D K  +V  G   T  ++ED +VY +G G S  LG N+       R    L PQ
Sbjct: 368 VVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNS------KRFQ--LVPQ 419

Query: 316 LVTSL 320
           LVTS+
Sbjct: 420 LVTSI 424



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 21/254 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            +I  +AG   +  ++ +G+++ +G +  G+   G++     +SPQLV++L ++ +V  +
Sbjct: 206 EVIDISAGWAFSAAVTKSGKIFTWGFNEKGQL--GLKHRWFNSSPQLVKTLLDVKIVSVS 263

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYL 166
            G      ++ +G +YT+  G   +LGH    + + P  +   +L  I V Q++ G  + 
Sbjct: 264 CGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFT 323

Query: 167 LALACQPSGMAVYSVGCGLGGKLG---------HGSRTDE---KHPRLIEQFQLLNLQPV 214
           + L        +Y+ G G   +LG          GSR +      P+++E  +   ++  
Sbjct: 324 MVLG---RNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIK-- 378

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            V  G  H   + +D  V  WGWG  GCLG  ++  + VP++V +++  +   ++ G+  
Sbjct: 379 YVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISCISAGEKH 438

Query: 275 TFVVSEDGDVYSFG 288
           + +V    D+ SF 
Sbjct: 439 SLIV-RGSDLTSFA 451



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 17/140 (12%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V + G  + G LG  N +    PKV+++L     +  ++G+     VS  GDVYS+G G+
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              L       G   +      P L+ +L  ++ERVV+++       N H+ ALT+ G++
Sbjct: 63  EGQL-------GVPEKMLFSTKPNLIKTL--LHERVVKVACG-----NFHSLALTDQGRV 108

Query: 352 YAFG---AGDKGQLGIELVN 368
           Y +G     D  + G+E  N
Sbjct: 109 YEWGQLHKIDDSKTGLEATN 128



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 7/116 (6%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHAAVVGQDGRVC 233
           M+V SVG    G+LG  +  +   P+++E  +      V+V  ++G  H   V + G V 
Sbjct: 1   MSVISVGNNKNGQLGIENIKEHLEPKVLESLK----GKVIVSCSSGEAHNICVSRFGDVY 56

Query: 234 TWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           +WG G+ G LG   +   S  P +++ L   + + VA G++ +  +++ G VY +G
Sbjct: 57  SWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWG 112



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 24/245 (9%)

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
           + +LG       +EP  +L +L+   +V  ++G  + +   C      VYS G G  G+L
Sbjct: 11  NGQLGIENIKEHLEP-KVLESLKGKVIVSCSSGEAHNI---CVSRFGDVYSWGRGKEGQL 66

Query: 190 GHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           G   +      P LI+   LL+ + V VA G +H+  +   GRV  + WG+   +     
Sbjct: 67  GVPEKMLFSTKPNLIKT--LLHERVVKVACGNFHSLALTDQGRV--YEWGQLHKIDDSKT 122

Query: 249 ECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
             E+   +++   ++  K   +     + ++  E  ++Y    G +      + ++    
Sbjct: 123 GLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEK-EIYDSTSGNNDDDDEASTSEQSKG 181

Query: 307 RHA------NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
           +H       N  TP  V  L   NE V+ IS      W A + A+T+SGK++ +G  +KG
Sbjct: 182 KHIGKIIDYNQTTPIQVQGL-LANEEVIDISAG----W-AFSAAVTKSGKIFTWGFNEKG 235

Query: 361 QLGIE 365
           QLG++
Sbjct: 236 QLGLK 240


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   L+S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPLVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    ++  +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIRKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + IR + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4072 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4129

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4130 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4188

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4189 ACGLNHTLAVSSD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4244

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4245 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4304

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4305 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4355

Query: 339  NA 340
             A
Sbjct: 4356 TA 4357



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4046 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4106 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4163

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4164 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSSDGSMVWAFGD 4210

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4211 GDYGKLGL---GNSTAKSSPQKVDV 4232



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4085

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4086 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4143

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4144 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4199

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4200 SDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4259

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4260 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4304

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4305 STGDVYAWGSNSEGQLGLGHTNHVRE 4330



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4122 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4179

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4180 LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGI 4238

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4239 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAV 4295

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +   G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4296 --GAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4348



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4214 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4273

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4274 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4326

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4327 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4359


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 143/295 (48%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 68  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ--- 124

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  +V +A G  + LAL+ +     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 125 IGALADQNIVHVACGESHSLALSDRGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 180

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 181 --LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 238

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   +F +S  G V+++G   +  LG +   D +   H  +L  Q         
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQ--------- 289

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 290 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 335



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 154/334 (46%), Gaps = 26/334 (7%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R +   P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    
Sbjct: 66  RGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---- 121

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ + +L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L
Sbjct: 122 PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 181

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLN 210
               ++Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + 
Sbjct: 182 NQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIP 238

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           L  V  AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ 
Sbjct: 239 LAQV--AAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISC 296

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G+  T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI
Sbjct: 297 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQI 346

Query: 331 SLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
           +         HT A    SG +YAFG G +GQLG
Sbjct: 347 ACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 375



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 113 LGHEREGNKPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 170

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 171 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 230

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV++ G    G+LG     D + P  +   
Sbjct: 231 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFAWGMNNAGQLGLSDEEDRESPCHV--- 283

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 284 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 343

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 344 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 375



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+A+G ++ G+   G+   +
Sbjct: 218 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQ--LGLSDEE 275

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 276 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 335

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 336 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 391


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 140/279 (50%), Gaps = 12/279 (4%)

Query: 30  LGREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG +  G +P    +L   +I   + G G +M +++ GQ++A+G    G+   G   T  
Sbjct: 65  LGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETT- 123

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPL 147
           V  P+LV+ L +  + Q   GN     LSR+G+++T+      +LG    EP+ + PHPL
Sbjct: 124 VRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPL 183

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
             +L  IP+ QI AG  +  AL+   SG AV+  G    G+LG   + D   P  I   +
Sbjct: 184 -KSLAGIPLAQITAGGDHSFALSL--SG-AVFGWGKNRAGQLGLNDKQDRAVPCHI---K 236

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  Q VV ++ G  H A + +DG + T+G G +G LGHG+   E +P+ V  L   +  
Sbjct: 237 FLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVS 296

Query: 267 HVATGDYTTF-VVSEDGDVYSFGCGESASLGHNAIADGQ 304
            +A G + T   V   G VY+FGC     LG   + D +
Sbjct: 297 QIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDAR 335



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 34/348 (9%)

Query: 24  NGKRNLLGREVNGTPLY----CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           N K   LG  V   P++    C    G  + +   G   ++ +   G VY  G +S G+ 
Sbjct: 6   NAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCGQL 65

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
            +   G     SP++V +L    +   + G   +  ++ +G+++ +  G+  +LG  T  
Sbjct: 66  GHDKAGI----SPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK- 198
             V    L+  L +  + Q+  G  + +AL+       +++ G    G+LG G     K 
Sbjct: 122 TTVRIPRLVKRLCDHRISQVMCGNQHCVALS---RDGQLFTWGQNTSGQLGLGKGEPSKL 178

Query: 199 --HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
             HP       L  +    + AG  H+  +   G V  WG  R G LG  +++  +VP  
Sbjct: 179 FPHPLK----SLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCH 234

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           ++ L   K ++++ GD  T  +++DG +++FG G    LGH     G  N     L P+ 
Sbjct: 235 IKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGH-----GSTNSE---LLPRR 286

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
           V  L+ +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 287 V--LELMGTEVSQIACGRH-----HTLAFVPSSGVVYAFGCNSHGQLG 327



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL GI + Q  AG   +  +S +G V+ +GK+  G+   G+   +    P  ++ 
Sbjct: 180 PHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQ--LGLNDKQDRAVPCHIKF 237

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  VV  + G+  TA L+++G ++TF  G+  +LGH +  +++ P  +L  L    V 
Sbjct: 238 LRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-ELMGTEVS 296

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI------EQFQLLNL 211
           QIA G  + LA    PS   VY+ GC   G+LG G   D + P  +      E F+++N+
Sbjct: 297 QIACGRHHTLAFV--PSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINI 354



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           R G+  L  ++    P + + L+  +++  + G   T  ++  G ++ FG  S+G+  +G
Sbjct: 217 RAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHG 276

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPND 141
              ++L+  P+ V  L    V Q A G   T A +   G VY F   +  +LG     + 
Sbjct: 277 STNSELL--PRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDA 334

Query: 142 VEPHPLLGTL--ENIPVVQI 159
             P P+  ++  E+  V+ I
Sbjct: 335 RSPFPVKTSVPSEDFRVINI 354


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A++  
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A +S +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4079 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4136

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               V+Q + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4137 GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4195

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4196 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4251

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4252 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4311

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P L+T L+  N R +     +S  W
Sbjct: 4312 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAW 4362

Query: 339  NA 340
             A
Sbjct: 4363 TA 4364



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4053 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4112

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + I ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4113 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4170

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4171 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4217

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4218 GDYGKLGL---GNSTAKSSPQKVDV 4239



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4092

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   V+Q++ G+ +  
Sbjct: 4093 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4150

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4151 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4206

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4207 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4266

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4267 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4311

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4312 STGDVYAWGSNSEGQLGLGHTNHVRE 4337



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +S+ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  +IQ + G   + +++  G+++ FG                         
Sbjct: 4129 PRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4188

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4189 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4248

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4249 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4300

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG
Sbjct: 4301 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAG 4355

Query: 220  AWHAA 224
              H+A
Sbjct: 4356 RCHSA 4360



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4221 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4280

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4281 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4333

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4334 HVREPTLITVLQGKNIRQISAGRCHSAAWTASP 4366


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVESL    V   
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVESLSLTVVDLI 313

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE + V+ +A G
Sbjct: 314 SCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 372 SWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKTIKVACGIWH 426

Query: 223 AA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL +     +A G 
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGH 486

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G   +  LG N  +DG+         P LV   +  +E V +IS 
Sbjct: 487 NMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLASELVEEISC 536

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S     H   LT   ++Y +G G  G+LG
Sbjct: 537 GAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 40/288 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V Q A G    A+ +R+G V+T  WG +   RLGH T+ +   P  L+ 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-KLVE 303

Query: 150 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           +L    V  I+ G  +  A+         G   Y+VG      LG G+      P+ +  
Sbjct: 304 SLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKKVSG 358

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+  K 
Sbjct: 359 -PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKT 417

Query: 266 IHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           I VA G + +  + E             +Y++G G+   LGH       G++    L P+
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-LVPK 469

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V +L + +    Q++  +++     T AL  SG+++  G+   GQLG
Sbjct: 470 CVQALLEYD--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L + +G++Y FG  +FG   +G + T  +  P+ VE+L     
Sbjct: 360 LEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKT 417

Query: 104 VQAAIGNFFTA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + +A            V+S+  ++YT+  G+  RLGH  +   + P  +   L
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALL 475

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     Q+A G+   +ALA   +   V+++G    G+LG+  ++D K P L+ Q +L + 
Sbjct: 476 E-YDFHQLACGHNMTVALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASE 529

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ GA H  V+     V TWG G  G LGHG+ +    P +V+AL D     ++ G
Sbjct: 530 LVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589

Query: 272 -DYTTFV 277
            ++TT +
Sbjct: 590 SNFTTCI 596


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 41/357 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S Q + +   + G     +++  G+V+++GK+  G   + V  +  V  P+++ES
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV--SVGVLHPKIIES 251

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 153
           L    V   A G   T  L+  G +  F WG     LG      + +   PH L G LE 
Sbjct: 252 LAFTHVKAIAFGAKHTCALAISGEL--FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEG 309

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + VV++A G  +   ++   S   +++ G G  G LGHG  +    P+ +E  + L ++ 
Sbjct: 310 VSVVKMACGQWHTAIIS---SSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVK- 365

Query: 214 VVVAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
             VA G WH A + +           G++ TWG    G LGH ++E + VP  V+AL D 
Sbjct: 366 -AVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDS 424

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V+     T  ++  G V++ G  E   LG + + D   +   +V  P     LK  
Sbjct: 425 DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD---SSICSVEGP-----LK-- 474

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            E V +IS  +S     H   LT +GK++ +G G +GQLG+    N  +R +P  V+
Sbjct: 475 TEFVREISSGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GNYVDRSSPTLVE 523



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+ +++ A G   T +IS +GQ++ +G  +FG   +G   T  V  P+ VESLK + V
Sbjct: 307 LEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG--DTSSVARPKEVESLKGLRV 364

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +          +  G+++T+   +  +LGH  + + + P   +  L +
Sbjct: 365 KAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVP-TCVKALTD 423

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q++      +AL    +G+ V+++G    G+LG   R D+     +E    L  + 
Sbjct: 424 SDFAQVSCAKALTVALTI--TGV-VFTIGSKEHGQLG-SHRLDDSSICSVEG--PLKTEF 477

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           V  +++G+ H AV+  +G+V TWG G  G LG GN    S P +V+AL D +   +A G 
Sbjct: 478 VREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGS 537

Query: 273 YTTFVV 278
             T  V
Sbjct: 538 NFTVAV 543



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 38/298 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 146
           V+ P+L+ S + + V   + G    A+++++G V  FSWG +   RLGH      + P  
Sbjct: 191 VSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEV--FSWGKEDGGRLGHKVSVGVLHPK- 247

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG---LGGKLGHGSRTDEKHPRLI 203
           ++ +L    V  IA G  +  ALA   SG  ++  G G   LG       R+     +L 
Sbjct: 248 IIESLAFTHVKAIAFGAKHTCALAI--SG-ELFEWGEGTHSLGVWDDQCQRSQWYPHKLF 304

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              + +++  V +A G WH A++   G++ T+G G +G LGHG+    + PK V++L  +
Sbjct: 305 GPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 362

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +   VA G + T  + E           G ++++G  +   LGH   +D +       L 
Sbjct: 363 RVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH---SDKESK-----LV 414

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           P  V +L   +    Q+S   ++     T ALT +G ++  G+ + GQLG   +++ +
Sbjct: 415 PTCVKAL--TDSDFAQVSCAKAL-----TVALTITGVVFTIGSKEHGQLGSHRLDDSS 465


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVESL    V   
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVESLSLTVVDLI 313

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE + V+ +A G
Sbjct: 314 SCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 372 SWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKTIKVACGIWH 426

Query: 223 AA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL +     +A G 
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGH 486

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G   +  LG N  +DG+         P LV   +  +E V +IS 
Sbjct: 487 NMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLASELVEEISC 536

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S     H   LT   ++Y +G G  G+LG
Sbjct: 537 GAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 139/288 (48%), Gaps = 40/288 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V Q A G    A+ +R+G V+T  WG +   RLGH T+ +   P  L+ 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRP-KLVE 303

Query: 150 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           +L    V  I+ G  +  A+         G   Y+VG      LG G+      P+ +  
Sbjct: 304 SLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKKVSG 358

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+  K 
Sbjct: 359 -PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKT 417

Query: 266 IHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           I VA G + +  + E             +Y++G G+   LGH       G++    L P+
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-LVPK 469

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V +L + N    Q++  +++     T AL  SG+++  G+   GQLG
Sbjct: 470 CVQALLEYN--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L + +G++Y FG  +FG   +G + T  +  P+ VE+L     
Sbjct: 360 LEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKT 417

Query: 104 VQAAIGNFFTA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + +A            V+S+  ++YT+  G+  RLGH  +   + P  +   L
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALL 475

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     Q+A G+   +ALA   +   V+++G    G+LG+  ++D K P L+ Q +L + 
Sbjct: 476 E-YNFHQLACGHNMTVALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASE 529

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ GA H  V+     V TWG G  G LGHG+ +    P +V+AL D     ++ G
Sbjct: 530 LVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589

Query: 272 -DYTTFV 277
            ++TT +
Sbjct: 590 SNFTTCI 596


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L +I +VQIA GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G     +  P+LI+   LL +    VAAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 13/264 (4%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP  Q+
Sbjct: 138 QIVQIACGYYHSLALSKGSEV--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQV 195

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           AAG  +   L    SG A++  G    G+LG     D   P L++   L + + V +  G
Sbjct: 196 AAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCG 250

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+  V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 279 SEDGDVYSFGCGESASLGHNAIAD 302
              G +YSFG G +  LG  + ++
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSN 334



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 30  LGREVN--GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG E+    +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+     +  +
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +
Sbjct: 231 FV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + +I V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 289 FELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDTDGQLGL 118


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 39/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + ++Q A G     L++  G+++ +G++S G   +GV   K V  P+LVE++ +  V   
Sbjct: 279 LDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVIQPRLVEAMASTTVDFV 336

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH T+ +   P  + G LE +   Q+A  
Sbjct: 337 ACGEFHTCAVTMAGELYT--WGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL---QVALV 391

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
            C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ + VA G WH
Sbjct: 392 TCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRTIAVACGVWH 449

Query: 223 AAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A V +             ++ TWG G    LGHG+++    P  V  L D     +A G
Sbjct: 450 TAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACG 509

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G+V++ G      LG N  +DG+         P LV   K   E V +I+
Sbjct: 510 HSLTVGLTTSGEVFTMGSSVYGQLG-NPQSDGK--------VPCLVKD-KLAGESVEEIA 559

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                Y   H   LT   ++Y +G G  G+LG
Sbjct: 560 C--GAY---HVAVLTSKNEVYTWGKGANGRLG 586



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V+Q A G    A+++R+G ++T+   +  RLGH    N ++P  L+  +
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR-LVEAM 328

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            +  V  +A G  +  A+      MA  +Y+ G G    G LGHG+      P+ I    
Sbjct: 329 ASTTVDFVACGEFHTCAVT-----MAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-P 382

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ  +V  G WH A++   G++ T+G G +G LGHG+ E  S P+ V++L+ ++ I 
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIA 442

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  V E              ++++G G+   LGH       G++ A  L P  
Sbjct: 443 VACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGH-------GDKDAR-LEPTC 494

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V+ L  ++    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 VSLL--IDSNFHRIACGHSL-----TVGLTTSGEVFTMGSSVYGQLG 534



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T LI+  GQ++ FG  +FG   +G +    V+ P+ VESL  +  
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRT 440

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +               +++T+  G+  RLGH  +   +EP   +  L 
Sbjct: 441 IAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEP-TCVSLLI 499

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    +   V+++G  + G+LG+  ++D K P L++  +L    
Sbjct: 500 DSNFHRIACGHSLTVGLT---TSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGES 554

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 555 VEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 613


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 144/328 (43%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+++++G++S G   +GV     V  P+L++SL N  +   A G + 
Sbjct: 318 ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLIDSLSNTNIELVACGEYH 375

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 376 TCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 433

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG       PR +E   L   + V+ A G WH A V +
Sbjct: 434 VT---SSGQLFTFGDGTFGVLGHGDTKSVSKPREVE--SLKGHRTVISACGVWHTAAVVE 488

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V AL D     VA G   T 
Sbjct: 489 IMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTV 548

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      LG N  ADG+               L    E  +  S    I
Sbjct: 549 ALTTSGHVYTMGSPVYGQLG-NPQADGK---------------LPTRVEGKLAKSFVEEI 592

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 593 ACGAYHVAVLTSRTEVYTWGKGANGRLG 620



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 44/320 (13%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           +G++   L+  P+ +ES   + V   A G    A+++++G +  FSWG ++  RLGH  +
Sbjct: 294 FGMKMDSLL--PKALESAVVLDVQNIACGGRHAALVTKQGEI--FSWGEESGGRLGHGVD 349

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTD 196
            + + P  L+ +L N  +  +A G  +  A+    SG  +Y+ G G    G LGHG+   
Sbjct: 350 SDVLHPK-LIDSLSNTNIELVACGEYHTCAVTL--SG-DLYTWGDGTYNFGLLGHGNEVS 405

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S P+ 
Sbjct: 406 HWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPRE 464

Query: 257 VQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQ 304
           V++L   + +  A G + T  V E             G ++++G G+   LGH       
Sbjct: 465 VESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGH------- 517

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           G++ A  L P  V +L  V+    +++  +S+     T ALT SG +Y  G+   GQLG 
Sbjct: 518 GDKEAK-LVPTCVAAL--VDPNFCRVACGHSL-----TVALTTSGHVYTMGSPVYGQLG- 568

Query: 365 ELVNNQTERGNPERVDIDLS 384
              N Q +   P RV+  L+
Sbjct: 569 ---NPQADGKLPTRVEGKLA 585



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ +GQ++ FG  +FG   +G   TK V+ P+ VESLK    
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRT 473

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V +A G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 474 VISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAAL 532

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +AL    SG  VY++G  + G+LG+  + D K P  +E  +L   
Sbjct: 533 VDPNFCRVACGHSLTVALTT--SGH-VYTMGSPVYGQLGN-PQADGKLPTRVEG-KLAKS 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 588 FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACG 647

Query: 272 DYTTFVV 278
              T  +
Sbjct: 648 TNFTATI 654


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4084 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4141

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4142 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4200

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4201 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4256

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4257 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4316

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4317 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4367

Query: 339  NA 340
             A
Sbjct: 4368 TA 4369



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4134 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4193

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4194 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4253

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4254 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4305

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4306 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4360

Query: 220  AWHAA 224
              H+A
Sbjct: 4361 RCHSA 4365



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4285

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4286 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4338

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4339 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4371


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 35/329 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +     G+  ++ I D G+++ +G +  G   +  + TK  ++P LV+SL N+ 
Sbjct: 34  ALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLVKSLANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTL-------ENI 154
           +VQAAIG +    +  +GR Y  +WG +       EP+  E   P+   +       + +
Sbjct: 93  IVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQL 150

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V++     G     G       P  ++  + + L   
Sbjct: 151 TVRQVAAGGTHSVVLTRE---GYVWT----WGQPWPPGDIKQISVPVRVQGLENVRL--- 200

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+D+  + +A G + 
Sbjct: 201 -IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWH 259

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++ +G+VY +G GE   LG         N  ++ + PQ V  L    E ++Q+S   
Sbjct: 260 STALTNEGEVYGWGRGEHGRLGFGD------NDKSSKMLPQKVNLL--AGEDIIQVSCGG 311

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +     H+ ALT  G++++FG GD G+LG
Sbjct: 312 T-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 31/274 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQGTKLV 89
           TP   +SL  ++I+QAA G    + + D G+ YA+G + +G+        E G    + +
Sbjct: 81  TPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDI 140

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PH 145
             P+     + + V Q A G   + VL+REG V+T+        G    P D++    P 
Sbjct: 141 VIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTW--------GQPWPPGDIKQISVPV 190

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            + G LEN+ ++ + A       LA +  G  +++ G    G+LG G      +P  ++ 
Sbjct: 191 RVQG-LENVRLIAVGA----FHNLALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDV 263
              L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  +P+ V  L   
Sbjct: 245 LDDLTL--VDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE 302

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             I V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 303 DIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG G +E + +  VV AL       V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        TP LV SL   N ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSLVKSL--ANVKIVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E   ++T  G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4064 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4121

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4122 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4180

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4181 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4236

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4237 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4296

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4297 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4347

Query: 339  NA 340
             A
Sbjct: 4348 TA 4349



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4038 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4097

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4098 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4155

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4156 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4202

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4203 GDYGKLGL---GNSTAKSSPQKVDV 4224



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4077

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4078 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4135

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4136 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4191

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4192 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4251

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4252 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4296

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4297 STGDVYAWGSNSEGQLGLGHTNHVRE 4322



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4114 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4173

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4174 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4233

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4234 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4285

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4286 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4340

Query: 220  AWHAA 224
              H+A
Sbjct: 4341 RCHSA 4345



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4206 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4265

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4266 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4318

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4319 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4351


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4184

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4185 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4244

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4245 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4296

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4297 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4351

Query: 220  AWHAA 224
              H+A
Sbjct: 4352 RCHSA 4356



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 150/332 (45%), Gaps = 39/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + I   A G     L++  G+V+ +G++S G   +GV   K V  P++VESL    +   
Sbjct: 281 LDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGV--VKDVIQPRMVESLAASSIGFV 338

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G LE + V  +  G
Sbjct: 339 ACGEFHTCAVTITGELYT--WGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCG 396

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +++ G G  G LGHG R +  +P+ +E   L  L+ + VA G WH
Sbjct: 397 PWHT---ALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVES--LSGLRTIAVACGVWH 451

Query: 223 AAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A V +            G++ TWG G    LGHG++E    P  V AL D     VA G
Sbjct: 452 TAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACG 511

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V+S G      LG N  ADG+         P LV   K   E V ++S
Sbjct: 512 HSITVGLTTSGQVFSMGSTVYGQLG-NPSADGK--------IPCLVED-KLFGESVEEVS 561

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                Y   H   LT   ++Y +G G  G+LG
Sbjct: 562 C--GAY---HVVVLTSKNEVYTWGKGANGRLG 588



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T L++  GQ++ FG  +FG   +G +    ++ P+ VESL  +  
Sbjct: 385 LEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDREN--ISYPKEVESLSGLRT 442

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 443 IAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALI 501

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    SG  V+S+G  + G+LG+ S  D K P L+E  +L    
Sbjct: 502 DYDFHKVACGHSITVGLTT--SGQ-VFSMGSTVYGQLGNPS-ADGKIPCLVED-KLFGES 556

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 271
              V+ GA+H  V+     V TWG G  G LGHG+ E    P +V+AL D    ++A G 
Sbjct: 557 VEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGS 616

Query: 272 DYTTFV 277
           +YT  +
Sbjct: 617 NYTAAI 622



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 33/285 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + +   A G    A+++R+G V+T+   +  RLGH    + ++P  ++ +L
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPR-MVESL 330

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLL 209
               +  +A G  +  A+        +Y+ G G    G LGHGS      P+ +    L 
Sbjct: 331 AASSIGFVACGEFHTCAVTITGE---LYTWGDGTHNAGLLGHGSDVSHWIPKRVSG-PLE 386

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            LQ   V  G WH A+V   G++ T+G G +G LGHG+ E  S PK V++L+ ++ I VA
Sbjct: 387 GLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAVA 446

Query: 270 TGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            G + T  V E            G ++++G G+   LGH       G++    L P  V 
Sbjct: 447 CGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTCVP 498

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +L  ++    +++  +SI     T  LT SG++++ G+   GQLG
Sbjct: 499 AL--IDYDFHKVACGHSI-----TVGLTTSGQVFSMGSTVYGQLG 536


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 21/274 (7%)

Query: 92  PQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           P L+ES++++F+ + A+  G      LS EG VY++  G+D +LGH  + +   P  L+ 
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPK-LIE 61

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L  + +V IA G  +  A+    S   +Y+ G G  G+LGHG   D+  P+++E  Q  
Sbjct: 62  DLLGVEIVDIACGGHHSAAIT---SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +  V   +G      V  D  V +WG G YG LG G  +   VP  + +L  +  + V 
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE 178

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   +  ++  G VY++G G+   LGH            +V  P+ V +L+   ++++ 
Sbjct: 179 CGSQFSVALTRSGAVYTWGKGDYHRLGHGT--------DDHVRRPRKVAALQ--GKKIIS 228

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           I+ T S+    H  A ++ G+++ +G  D+GQLG
Sbjct: 229 IA-TGSL----HCVACSDKGEVFTWGDNDEGQLG 257



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 8/285 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P    S+Q + I + A  +G    + +S  G VY++G+   G+  +G + +     P+L+
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLI 60

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E L  + +V  A G   +A ++  G +YT+  G   RLGH    + + P  ++  L++  
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPK-VVEALQDYK 119

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ +A G      L C      V+S G G  GKLG G     K P  I+   L  L  V 
Sbjct: 120 VIDVACGSGDAQTL-CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKID--SLAGLGVVK 176

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V  G+  +  + + G V TWG G Y  LGHG ++    P+ V AL   K I +ATG    
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
              S+ G+V+++G  +   LG    +     R  + L  + +T +
Sbjct: 237 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRV 281



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L G+ I+  A G   +  I+ AG +Y +GK  +G   +G    +L   P++VE+
Sbjct: 57  PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEA 114

Query: 98  LKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
           L++  V+  A G  +  T  ++ +  V+++  G+  +LG     +D    PL + +L  +
Sbjct: 115 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG--SDGCKVPLKIDSLAGL 172

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV++  G  + +AL    SG AVY+ G G   +LGHG+    + PR +   Q    + +
Sbjct: 173 GVVKVECGSQFSVALT--RSG-AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ--GKKII 227

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A G+ H       G V TWG    G LG G       P++V AL   K   VA G   
Sbjct: 228 SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAH 287

Query: 275 TFVVS 279
           T   S
Sbjct: 288 TLAWS 292


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 35/324 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G++S G   +GV   K V  P+LVE+L +  +   A G F 
Sbjct: 284 ACGVRHASLVTRQGEVFTWGEESGGRLGHGV--GKNVVQPRLVEALISTTIDFVACGEFH 341

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           +  ++  G +YT+  G  N   LGH +  +   P  + G LE + +  +A G  +   + 
Sbjct: 342 SCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALIT 401

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-- 228
              S   +++ G G  G LGHG R +  +PR +E   LL L+ + VA G WH A V +  
Sbjct: 402 ---STGQLFTFGDGTFGVLGHGDRQNVSYPREVE--SLLGLRTIAVACGVWHTAAVVEVI 456

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++
Sbjct: 457 ATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLT 516

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V++ G      LG ++++DG+         P LV   K   E + +I+     Y  
Sbjct: 517 TSGRVFTMGSTVYGQLG-SSLSDGK--------VPCLVGD-KIAGESIEEIAC--GAY-- 562

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 563 -HVAVLTSKNEVYTWGKGANGRLG 585



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 37/294 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    ++++R+G V+T+   +  RLGH    N V+P  L+  L
Sbjct: 269 PRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR-LVEAL 327

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            +  +  +A G  +  A+      MA  +Y+ G G+   G LGHGS      P+ I    
Sbjct: 328 ISTTIDFVACGEFHSCAVT-----MAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAG-P 381

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   VA G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L  ++ I 
Sbjct: 382 LEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA 441

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  V E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 442 VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGH-------GDKEAR-LKPTC 493

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           V++L   N    +I+  +S+     T  LT SG+++  G+   GQLG  L + +
Sbjct: 494 VSALIDYN--FHKIACGHSL-----TVGLTTSGRVFTMGSTVYGQLGSSLSDGK 540



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   A G   T LI+  GQ++ FG  +FG   +G +  + V+ P+ VESL  +  
Sbjct: 382 LEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRT 439

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 440 IAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKP-TCVSALI 498

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V+++G  + G+LG  S +D K P L+   ++    
Sbjct: 499 DYNFHKIACGHSLTVGLTT--SGR-VFTMGSTVYGQLG-SSLSDGKVPCLVGD-KIAGES 553

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 554 IEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACG 612


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L +  G+V+ +G++  G   +G      ++ P+LVESL    V   
Sbjct: 256 LDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD--ISRPKLVESLSLTVVDLI 313

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           + G F T  ++  G +  F+WG    N   LG  TE +   P  + G LE + V+ +A G
Sbjct: 314 SCGEFHTCAVTTSGDL--FNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACG 371

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   +Y+ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 372 SWHS---ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEA--LSGFKTIKVACGIWH 426

Query: 223 AA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A    V  Q G      ++ TWG G    LGHG++E   VPK VQAL +     +A G 
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGH 486

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G   +  LG N  +DG+         P LV   +  +E V +IS 
Sbjct: 487 NMTVALATSGRVFTMGSSSNGQLG-NPKSDGK--------QPCLVQD-RLASELVEEISC 536

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             S     H   LT   ++Y +G G  G+LG
Sbjct: 537 GAS-----HVTVLTSRSEVYTWGMGANGRLG 562



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 139/288 (48%), Gaps = 40/288 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V Q A G    A+ +R+G V+T  WG +   RLGH T+ +   P  L+ 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFT--WGEEFGGRLGHGTDADISRPK-LVE 303

Query: 150 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           +L    V  I+ G  +  A+         G   Y+VG      LG G+      P+ +  
Sbjct: 304 SLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGL-----LGCGTEVSYWLPKKVSG 358

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  LQ + VA G+WH+A+    G++ T+G G +G LGHG+ E  + PK V+AL+  K 
Sbjct: 359 -PLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKT 417

Query: 266 IHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           I VA G + +  + E             +Y++G G+   LGH       G++    L P+
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-------GDKEPR-LVPK 469

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V +L + N    Q++  +++     T AL  SG+++  G+   GQLG
Sbjct: 470 CVQALLEYN--FHQLACGHNM-----TVALATSGRVFTMGSSSNGQLG 510



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L + +G++Y FG  +FG   +G + T  +  P+ VE+L     
Sbjct: 360 LEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRET--LAYPKEVEALSGFKT 417

Query: 104 VQAAIGNFFTA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + +A            V+S+  ++YT+  G+  RLGH  +   + P  +   L
Sbjct: 418 IKVACGIWHSAAIVEVTNQTGANVMSK--KLYTWGDGDKNRLGHGDKEPRLVPKCVQALL 475

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     Q+A G+   +ALA   +   V+++G    G+LG+  ++D K P L+ Q +L + 
Sbjct: 476 E-YNFHQLACGHNMTVALA---TSGRVFTMGSSSNGQLGN-PKSDGKQPCLV-QDRLASE 529

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ GA H  V+     V TWG G  G LGHG+ +    P +V+AL D     ++ G
Sbjct: 530 LVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCG 589

Query: 272 -DYTTFV 277
            ++TT +
Sbjct: 590 SNFTTCI 596


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4084 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4141

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4142 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4200

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4201 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4256

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4257 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4316

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4317 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4367

Query: 339  NA 340
             A
Sbjct: 4368 TA 4369



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4058 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4117

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4118 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4175

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4176 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4222

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4223 GDYGKLGL---GNSTAKSSPQKVDV 4244



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4097

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4098 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4155

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4156 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4211

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4212 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4271

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4272 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4316

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4317 STGDVYAWGSNSEGQLGLGHTNHVRE 4342



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4134 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4193

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4194 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4253

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4254 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4305

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4306 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4360

Query: 220  AWHAA 224
              H+A
Sbjct: 4361 RCHSA 4365



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4285

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4286 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4338

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4339 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4371


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 153/345 (44%), Gaps = 45/345 (13%)

Query: 39  LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           L+ ++L+   ++     A G     L++  G+++++G++S G   +GV     V  P+L+
Sbjct: 299 LFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSD--VMHPKLI 356

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTL 151
           ++L N  +   A G + T  ++  G +YT  WG    N   LGH  E +   P  + G L
Sbjct: 357 DALSNTNIELVACGEYHTCAVTLSGDLYT--WGDGTYNFGLLGHGNEVSHWVPKRVNGPL 414

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E I V  I+ G  +   +    S   +++ G G  G LGHG R     P+ +E   L  L
Sbjct: 415 EGIHVSSISCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSISLPKEVE--SLKGL 469

Query: 212 QPVVVAAGAWHAAVV------------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           + V  A G WH A V               G++ TWG G  G LGHG++E + VP  V A
Sbjct: 470 RTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 529

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L +     VA G   T   +  G VY+ G      LG N +ADG+         P  V  
Sbjct: 530 LVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLG-NPLADGK--------LPTRV-- 578

Query: 320 LKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 579 -----EGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 618



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 44/320 (13%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           +GV+   L   P+ +ES   + V   A G    A+++++G +  FSWG ++  RLGH  +
Sbjct: 292 FGVKMDSLF--PKALESAVVLDVQNIACGGQHAALVTKQGEI--FSWGEESGGRLGHGVD 347

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTD 196
            + + P  L+  L N  +  +A G  +  A+        +Y+ G G    G LGHG+   
Sbjct: 348 SDVMHPK-LIDALSNTNIELVACGEYHTCAVTLSGD---LYTWGDGTYNFGLLGHGNEVS 403

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+PK 
Sbjct: 404 HWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKE 462

Query: 257 VQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQ 304
           V++L  ++ +  A G + T  V E             G ++++G G+   LGH       
Sbjct: 463 VESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------- 515

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           G++ A  L P  V +L + N    Q++  +S+     T A T SG +Y  G+   GQLG 
Sbjct: 516 GDKEAK-LVPTCVAALVEPN--FCQVACGHSL-----TVARTTSGHVYTMGSPVYGQLGN 567

Query: 365 ELVNNQTERGNPERVDIDLS 384
            L + +     P RV+  LS
Sbjct: 568 PLADGKL----PTRVEGKLS 583



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 22/248 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G +  K ++ P+ VESLK +  
Sbjct: 414 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRT 471

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           VQAA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 472 VQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAAL 530

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   L +A   SG  VY++G  + G+LG+    D K P  +E  +L   
Sbjct: 531 VEPNFCQVACGHS--LTVARTTSGH-VYTMGSPVYGQLGN-PLADGKLPTRVEG-KLSKS 585

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 586 FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 645

Query: 272 DYTTFVVS 279
             T+F  +
Sbjct: 646 --TSFTAA 651



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 134/320 (41%), Gaps = 41/320 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS--FGEAEYGVQGTKLVTSPQLV 95
           P    +L    I   A G   T  ++ +G +Y +G  +  FG   +G + +  V  P+ V
Sbjct: 353 PKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRV 410

Query: 96  E-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLG 149
              L+ I V   + G + TAV++  G+++TF  G    LGH        P +VE      
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVE------ 464

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHP 200
           +L+ +  VQ A G  +  A+     G           +++ G G  G+LGHG    +K  
Sbjct: 465 SLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG----DKEA 520

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQ--DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           +L+       ++P        H+  V +   G V T G   YG LG+   + +   +V  
Sbjct: 521 KLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEG 580

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L+      +A G Y   V++   +VY++G G +  LGH    D          +P LV 
Sbjct: 581 KLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN--------SPSLVE 632

Query: 319 SL--KQVNERVVQISLTNSI 336
           +L  KQV       S T +I
Sbjct: 633 ALKDKQVKSIACGTSFTAAI 652


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 162/362 (44%), Gaps = 44/362 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + +   + G    ML++  G+ +++G+++ G   +G +    V+ P+L++
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--VSHPKLIK 355

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           + K + V   A G + +  ++  G +YT  WG+ A+    LGH +E +   P  + G +E
Sbjct: 356 NFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPKKVCGLME 413

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V  ++ G  +   +    S   +++ G G  G LGHG R+    PR +E F    L+
Sbjct: 414 GLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVETFN--GLK 468

Query: 213 PVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECESVPKVVQA 259
            + VA G WH A V     G D R        + TWG G  G LGHG+ +    P+ + A
Sbjct: 469 TLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITA 528

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L D     VA     T  ++  G VY+ G      LG            AN ++P  V  
Sbjct: 529 LVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGMSPICVED 579

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              V+  V +IS  +      H   LT   ++Y +G G+ GQLG     N+     P  V
Sbjct: 580 Y-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC---TPTLV 630

Query: 380 DI 381
           DI
Sbjct: 631 DI 632



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 137/300 (45%), Gaps = 36/300 (12%)

Query: 85  GTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPND 141
           GT++   +P+ +ES   + V   + GN    +++++G    FSWG +A  RLGH  E  D
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEA--FSWGEEAGGRLGHGAE-TD 347

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           V    L+   + + V  IA G  +  A+      +  +  G    G LGH S      P+
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVT-SSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            +    +  L+   V+ G WH A++   GR+ T+G G +G LGHG+      P+ V+  N
Sbjct: 407 KVCGL-MEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFN 465

Query: 262 DVKAIHVATGDYTTFVVSE-------------DGDVYSFGCGESASLGHNAIADGQGNRH 308
            +K + VA G + T  V E              G ++++G G+   LGH       G+  
Sbjct: 466 GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGH-------GDNK 518

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
              L PQ +T+L       V  S +      A T ALT +G++Y  G+   GQLG  L N
Sbjct: 519 PR-LAPQCITAL-------VDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLAN 570



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 29/269 (10%)

Query: 41  CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           C  ++G+R+   + G   T LI+ AG+++ FG  +FG   +G +      +P+ VE+   
Sbjct: 409 CGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSG--CITPREVETFNG 466

Query: 101 IFVVQAAIGNFFTAVL--------SR-----EGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  ++ A G + TA +        SR      G ++T+  G+  +LGH      + P   
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQ-C 525

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           +  L +    ++A  Y   +AL    +   VY++G  + G+LG     +   P  +E + 
Sbjct: 526 ITALVDKSFSEVACSYAMTVALT---TTGRVYTMGSNVYGQLG-CPLANGMSPICVEDY- 580

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L++     ++ G+ H AV+     V TWG G  G LGHG+ E +  P +V  L D +   
Sbjct: 581 LVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKR 640

Query: 268 VATGDYTT-------FVVSEDGDVYSFGC 289
           +  G   +       + +S D  +  FGC
Sbjct: 641 IVCGSNFSAAICVHNWALSADNSI-CFGC 668


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 179/397 (45%), Gaps = 68/397 (17%)

Query: 9   AHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQV 68
           A   P L  D ++  N  + L G            L G  I+  + G+  TM ++ +G V
Sbjct: 27  AKRRPTLAIDDVSASNFPKQLGG------------LLGEEIVAVSCGSRHTMALTASGAV 74

Query: 69  YAFGKDSFGEAEYGVQGTKLVTSPQLV-----ESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           Y++G  S G+  +G    K +  PQ +     E LK  +V   + G   +A ++ +G +Y
Sbjct: 75  YSWGWGSMGQLGHG--DLKSINVPQKIAFFEQEGLKVDYV---SCGGCHSAAVTNDGTLY 129

Query: 124 TFS---WG-----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
            +    WG      +    H + P      PLL  + +  VV+++ G  +  AL    + 
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKC---PLLEGVADESVVKVSCGGTHTAALT---NL 183

Query: 176 MAVYSVGCGLGGKLGHGS----RTDE------KHPRLIEQFQLLNLQPVV-VAAGAWHAA 224
             VY  G G  G+LG GS     TD+        P L+E F   N + VV VA GA+H+A
Sbjct: 184 GRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGF---NGEKVVQVACGAFHSA 240

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            V + G V  WG   YG LG G    +  PK V+  +D+ A+ V+ G + T VV++ GD 
Sbjct: 241 AVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDC 300

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           Y+FG GE   LG   + D +         P LV +LK   + V+Q +   S     HT  
Sbjct: 301 YAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GQTVIQAACGGS-----HTLF 345

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           +T  G  Y  G  D G+LG+    +      P R+D+
Sbjct: 346 VTSDGIAYVAGRPDHGRLGM---TDMKPLSVPTRLDL 379



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 21/199 (10%)

Query: 177 AVYSVGCGLGGKLGHGSR-------TDEKHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQ 228
           AV + GC   G+LG G++        D       +Q   LL  + V V+ G+ H   +  
Sbjct: 11  AVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA 70

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYS 286
            G V +WGWG  G LGHG+ +  +VP+ +       +K  +V+ G   +  V+ DG +Y 
Sbjct: 71  SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV-NERVVQISLTNSIYWNAHTFAL 345
           +G      LG     +      A+   P     L+ V +E VV++S   +     HT AL
Sbjct: 131 WGETHWGQLGLPKEFEA-----AHESFPVKCPLLEGVADESVVKVSCGGT-----HTAAL 180

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T  G++Y +G GD GQLGI
Sbjct: 181 TNLGRVYVWGRGDSGQLGI 199



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 8/135 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP        I  ++ + G   TM+++ +G  YAFG+  +G    G+  TK  T P LV+
Sbjct: 269 TPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYG--RLGLGDTKSRTRPHLVK 326

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENI 154
           +LK   V+QAA G   T  ++ +G  Y     +  RLG      D++P   P    L  I
Sbjct: 327 ALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM----TDMKPLSVPTRLDLGPI 382

Query: 155 PVVQIAAGYCYLLAL 169
           PV Q++AG  + +AL
Sbjct: 383 PVRQVSAGGAHSMAL 397


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 361 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 416

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 417 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 469

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 470 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 527

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 528 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 585

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 586 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 630

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 631 GQVYAWGCG 639



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 408 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 467

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 468 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 525

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 526 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 580

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 639

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 640 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 684

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 685 YAWGNNSMGQCG 696



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 453 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 510

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 511 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 567

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 568 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 623

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 624 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 681

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 682 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 31/302 (10%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 3613 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 3670

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P             ++
Sbjct: 3671 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RV 3718

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 3719 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 3774

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L  V    VA G   T  ++
Sbjct: 3775 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA 3834

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 3835 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 3885

Query: 339  NA 340
             A
Sbjct: 3886 TA 3887



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 33/205 (16%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3587 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3646

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3647 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3704

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN           TS K++ ERV    L        HT A++  G + +AFG 
Sbjct: 3705 -----GLGN-----------TSNKKLPERVA-CGLN-------HTLAVSADGSMVWAFGD 3740

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 3741 GDYGKLGL---GNSTAKSSPQKVDV 3762



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 38/326 (11%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3626

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3684

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P               VA G  H   V 
Sbjct: 3685 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER-------------VACGLNHTLAVS 3729

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 3730 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 3789

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 3790 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 3834

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 3835 STGDVYAWGSNSEGQLGLGHTNHVRE 3860



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 506 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 561

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 562 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 620

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 621 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 673

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 674 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 60/234 (25%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 3663 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVACGL 3722

Query: 75   --------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
                          +FG+ +YG  G   +   +SPQ V+ L  I + + A G  F+  L+
Sbjct: 3723 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 3782

Query: 118  REGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
            ++G VYTF  G D  +G       +H  P  V   P+L     + +  +A G  + LALA
Sbjct: 3783 KDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDVAVGAEHTLALA 3834

Query: 171  CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
               S   VY+ G    G+LG G     + P L+   Q  N++   ++AG  H+A
Sbjct: 3835 ---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAGRCHSA 3883



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 603 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 656

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 657 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 712

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 713 LDGIAIQQISAGTSHSLAWTALPRDRQV 740



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 3744 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3803

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 3804 RNH--NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 3856

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 3857 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 3889


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4012 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4069

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4070 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4128

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4129 ACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4184

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4185 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4244

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4245 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4295

Query: 339  NA 340
             A
Sbjct: 4296 TA 4297



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3986 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4045

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4046 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4103

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4104 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4150

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4151 GDYGKLGL---GNSTAKSSPQKIDV 4172



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4025

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4026 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4083

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4084 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4139

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4140 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4199

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4200 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4244

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4245 SNGDVYAWGSNSEGQLGLGHTNHVRE 4270



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4062 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4119

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4120 LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4178

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4179 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4235

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4236 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4288



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4154 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4213

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4214 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4266

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4267 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4299


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+         ++ + P+ V  L  +   V QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNST--------SHEINPRKVFEL--MGSIVTQIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 17/266 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS  + + G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L+      A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTLS-----GAIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLGHNAIAD 302
            V   G +YSFG G +  LG  + ++
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSN 334



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVV-ALDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRY----VPNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 138
            G++  K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3690 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3750 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 3807

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 3808 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 3854

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 3855 GDYGKLGL---GNSTAKSSPQKIDV 3876



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3729

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 3730 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3787

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 3788 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 3843

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 3844 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 3903

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 3904 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 3948

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 3949 SNGDVYAWGSNSEGQLGLGHTNHVRE 3974



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 18/250 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTF---V 277
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G   +     
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735

Query: 278 VSEDGDVYSF 287
           +  D + +SF
Sbjct: 736 LPRDREHHSF 745



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 3766 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 3823

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 3824 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 3882

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 3883 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 3939

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P VV  L       ++ G
Sbjct: 3940 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAG 3992



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQP 173
           L+ I + QI+AG  + LA    P
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALP 737



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 3858 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3917

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 3918 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 3970

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    ++  L+   V QI+AG C+  A    P
Sbjct: 3971 HVREPTVVTGLQGKNVRQISAGRCHSAAWTAPP 4003


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+         ++ + P+ V  L  +   V Q++         HT A  
Sbjct: 266 FGAGGYGQLGHNST--------SHEINPRKVFEL--MGSIVTQVACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 133/264 (50%), Gaps = 13/264 (4%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS  + + G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS--DGQLGLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            +VQ A G + +  LS+   V+ +      +LG   +        L+ +L  IP +Q+AA
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 162 G--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           G  + ++L L+      A++  G    G+LG     D   P L++   L + + V +  G
Sbjct: 198 GGAHSFVLTLS-----GAIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCG 250

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+  V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310

Query: 279 SEDGDVYSFGCGESASLGHNAIAD 302
              G +YSFG G +  LG  + ++
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSN 334



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVV-ALDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRY----VPNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4073 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4130

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4189

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4190 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4245

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4246 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4306 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4356

Query: 339  NA 340
             A
Sbjct: 4357 TA 4358



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4243 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4294

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4295 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4349

Query: 220  AWHAA 224
              H+A
Sbjct: 4350 RCHSA 4354



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4275 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4327

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4328 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4360


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 155/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V+ + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4131

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4132 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4190

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + +A++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4191 ACGLNHTVAVST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACG 4246

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L+ V    +A G   T  +S
Sbjct: 4247 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALS 4306

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P L+T L+  N R +     +S  W
Sbjct: 4307 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLITVLQGKNIRQISAGRCHSAAW 4357

Query: 339  NA 340
             A
Sbjct: 4358 TA 4359



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4165

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4212

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VDI
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDI 4234



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   +   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVS 4201

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V  L  V    + +          HT AL+
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLSGVFIEDIAVG-------AEHTLALS 4306

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 STGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  +F+   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 4276 RNH--NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVY--AWGSNSEGQLGLGH---TN 4328

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4329 HVREPTLITVLQGKNIRQISAGRCHSAAWTAPP 4361



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4183

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4184 GYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV 4243

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  I
Sbjct: 4244 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDI 4295

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LAL+   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG
Sbjct: 4296 AVGAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAG 4350

Query: 220  AWHAA 224
              H+A
Sbjct: 4351 RCHSA 4355



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVSIQQISAGTSHSLAWTALPRDRQV 742


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNIRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNIRQISAGRCHSAAWTAPP 4362


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4073 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4130

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4189

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4190 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4245

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4246 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4306 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4356

Query: 339  NA 340
             A
Sbjct: 4357 TA 4358



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4243 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4294

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4295 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4349

Query: 220  AWHAA 224
              H+A
Sbjct: 4350 RCHSA 4354



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4275 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4327

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4360


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4131

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4190

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4191 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4246

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L  V    VA G   T  ++
Sbjct: 4247 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA 4306

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4307 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4357

Query: 339  NA 340
             A
Sbjct: 4358 TA 4359



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 STGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4183

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4184 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4243

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +
Sbjct: 4244 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDV 4295

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4296 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4350

Query: 220  AWHAA 224
              H+A
Sbjct: 4351 RCHSA 4355



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4276 RNH--NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4328

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4329 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4361


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 159/355 (44%), Gaps = 39/355 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   S   + +   A G     +I+  G+VY++G +S G    G Q    V+ P+LVES
Sbjct: 252 PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGG--IGNQVNIKVSRPKLVES 309

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVE-PHPLLGTLENIP 155
           + ++ V   A G+     ++  G +  F WG    +G      N++  PH L   L+ I 
Sbjct: 310 VASLHVKAVAYGSKHACAVTVSGEL--FEWGEGPHMGQLDCYANNLWFPHKLFSPLDGIS 367

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+IA G  +   +    S   +Y+ G G  G LGHG       P+ +E  +   ++   
Sbjct: 368 VVKIACGPWHTAIIT---SSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVK--C 422

Query: 216 VAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           VA G WH A + +            ++ TWG    G LGH +++ + +P  V +L D   
Sbjct: 423 VACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDF 482

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           I V+ G   T V+S  G V++ G      L         GN HA+  T   V  L +  E
Sbjct: 483 IQVSCGMALTVVLSITGVVFTIGSSMHGQL---------GNPHADGRTVCAVEGLLKT-E 532

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            V  IS  +S     H   LT +GK++ +G G +GQLG+    +   R  P  VD
Sbjct: 533 FVRHISSGSS-----HVAVLTTNGKVFTWGKGKEGQLGL---GDYLNRSTPTLVD 579



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIF 102
           L GI +++ A G   T +I+ +GQ+Y +G  +FG   +G  QGT   T P+ VE LK   
Sbjct: 363 LDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGT---TRPKEVEYLKGSR 419

Query: 103 VVQAAIGNFFTAVL--------SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE 152
           V   A G + TA +        S   R   F+WG+  R  LGH  +   + P   + +L 
Sbjct: 420 VKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLT 478

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +   +Q++ G    + L+   +G+ V+++G  + G+LG+    D +    +E   LL  +
Sbjct: 479 DYDFIQVSCGMALTVVLSI--TGV-VFTIGSSMHGQLGN-PHADGRTVCAVEG--LLKTE 532

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            V  +++G+ H AV+  +G+V TWG G+ G LG G+    S P +V AL   +   ++ G
Sbjct: 533 FVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCG 592

Query: 272 -DYTTFV 277
            +YT  V
Sbjct: 593 YNYTAAV 599



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 44/309 (14%)

Query: 71  FGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
           F  D+FG   +Y      L   P LV+S   + V   A G    A+++++G VY  SWGN
Sbjct: 233 FWGDAFGSILDYDDTSKSL---PMLVDSTNMLDVQSIACGETHAAIITKQGEVY--SWGN 287

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQI-AAGYCYLLALACQPSGMAVYSVGCGLGGK 188
           ++  G   + N     P L  +E++  + + A  Y    A A   SG  ++  G G    
Sbjct: 288 ESSGGIGNQVNIKVSRPKL--VESVASLHVKAVAYGSKHACAVTVSG-ELFEWGEG---- 340

Query: 189 LGHGSRTDEKHPRLIEQFQLLN----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
             H  + D     L    +L +    +  V +A G WH A++   G++ T+G G +G LG
Sbjct: 341 -PHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLG 399

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCGESAS 294
           HG+ +  + PK V+ L   +   VA G + T  + E             ++++G  +   
Sbjct: 400 HGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGK 459

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH   AD +       L P  V SL   +   +Q+S   ++     T  L+ +G ++  
Sbjct: 460 LGH---ADKKMK-----LIPTCVDSLTDYD--FIQVSCGMAL-----TVVLSITGVVFTI 504

Query: 355 GAGDKGQLG 363
           G+   GQLG
Sbjct: 505 GSSMHGQLG 513


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4068 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4125

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4126 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4184

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4185 ACGLNHTLAVSV--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4240

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4241 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4300

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4301 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4351

Query: 339  NA 340
             A
Sbjct: 4352 TA 4353



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4206

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4196 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4300

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4118 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4175

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4176 LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4234

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4235 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4291

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4292 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4344



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4270 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4322

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4323 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4355


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +G +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHGREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G +   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG++     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 171 LGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 12/210 (5%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTE-PNDVEPHPL 147
           +P+ +E+L  I V Q A G+  T VLS++G+VYT  WG ++R  LG   E  + +     
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYT--WGQNSRGQLGLGKEGCSSISSPQC 169

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +L ++PVVQ++AG  +  AL+   SG +V+  G    G+LG G  TD + P L+    
Sbjct: 170 VRSLSSMPVVQVSAGGDHSFALSV--SG-SVFGWGRNDCGQLGLGDTTDRETPTLV---H 223

Query: 208 LLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            LN++  V AA G  H AV+  DG V T+G G YG LGH +      P++V  L   K  
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            +A G Y T V+++   VYSFGC E   LG
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 23/316 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +L GI + Q A G+  T+++S  GQVY +G++S G+   G +G   ++SPQ V 
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVR 171

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIP 155
           SL ++ VVQ + G   +  LS  G V  F WG ND       +  D E   L+  L    
Sbjct: 172 SLSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRETPTLVHYLNMKK 229

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V  A G  +   L    +   V++ G G  G+LGH S  +   PRL+   +L   +   
Sbjct: 230 TVFAACGKDHTAVLTMDGT---VFTFGSGHYGQLGHNSFRNALCPRLVA--ELWGAKVTK 284

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH--VATGDY 273
           +A G +H  V+    +V ++G   +G LG   E    VP  VQ   +   I    A GD 
Sbjct: 285 IACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQNIFAGGDS 344

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ-VNERVVQISL 332
           +      + DV        + +    + D    R  +    +L T +KQ +++R    SL
Sbjct: 345 SFATCRPEQDV--------SEVPVEILVD----RWISEWDSKLQTKVKQEIDQRFSSASL 392

Query: 333 TNSIYWNAHTFALTES 348
            N  + N      T S
Sbjct: 393 MNRSFLNQSKHFQTSS 408



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 106/230 (46%), Gaps = 33/230 (14%)

Query: 144 PHP-----LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TD 196
           PHP      L  L  I V Q+A G  + + L+       VY+ G    G+LG G    + 
Sbjct: 107 PHPPFTPRSLEALSGITVTQVACGSQHTVVLS---KDGQVYTWGQNSRGQLGLGKEGCSS 163

Query: 197 EKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESV 253
              P+ +     L+  PVV V+AG  H+  +   G V  +GWGR  C  LG G+      
Sbjct: 164 ISSPQCVRS---LSSMPVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTDRET 218

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           P +V  LN  K +  A G   T V++ DG V++FG G    LGHN+          N L 
Sbjct: 219 PTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSF--------RNALC 270

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           P+LV  L     +V +I+         HT  LT+  K+Y+FG  + GQLG
Sbjct: 271 PRLVAEL--WGAKVTKIACG-----RYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           P+ ++AL+ +    VA G   T V+S+DG VY++G      LG       +G   +++ +
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK----EGC--SSISS 166

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
           PQ V SL  +   VVQ+S         H+FAL+ SG ++ +G  D GQLG+    + T+R
Sbjct: 167 PQCVRSLSSMP--VVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDTTDR 216

Query: 374 GNPERV 379
             P  V
Sbjct: 217 ETPTLV 222


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4068 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4125

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4126 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4184

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4185 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4240

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4241 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4300

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4301 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4351

Query: 339  NA 340
             A
Sbjct: 4352 TA 4353



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4042 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4102 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4159

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4160 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4206

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4207 GDYGKLGL---GNSTAKSSPQKIDV 4228



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4081

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4139

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4140 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4195

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4196 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4255

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4256 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4300

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4301 SNGDVYAWGSNSEGQLGLGHTNHVRE 4326



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4118 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4175

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4176 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4234

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4235 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4291

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4292 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4344



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4270 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4322

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4323 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4355


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4131

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4190

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4191 ACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4246

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4247 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4306

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4307 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4357

Query: 339  NA 340
             A
Sbjct: 4358 TA 4359



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4212

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 228  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4306

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4181

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4182 LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQK-VDVLCGIGI 4240

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4241 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4297

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4298 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4350



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4276 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4328

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4329 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4361


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4038 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4095

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4096 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4154

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4155 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4210

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4211 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4270

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4271 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4321

Query: 339  NA 340
             A
Sbjct: 4322 TA 4323



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4012 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4072 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4129

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4130 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4176

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4177 GDYGKLGL---GNSTAKSSPQKIDV 4198



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4051

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4052 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4109

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4110 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4165

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4166 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4225

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4226 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4270

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4271 SNGDVYAWGSNSEGQLGLGHTNHVRE 4296



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4088 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4145

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4146 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4204

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4205 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4261

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4262 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4314



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4180 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4239

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4240 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4292

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4293 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4325


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+LV  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLVEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+V+ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4131

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4190

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4191 ACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4246

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4247 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4306

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4307 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4357

Query: 339  NA 340
             A
Sbjct: 4358 TA 4359



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSTDGSMVWAFGD 4212

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+L+E+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLVEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4183

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4184 GYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4243

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4244 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4295

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4296 AVGAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4350

Query: 220  AWHAA 224
              H+A
Sbjct: 4351 RCHSA 4355



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           VE L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 VEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4276 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4328

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4329 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4361


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L +I +VQIA GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G     +  P+LI+   LL +    VAAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 13/258 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP  Q+
Sbjct: 138 QIVQIACGYYHSLALSKGSEV--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQV 195

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           AAG  +   L    SG A++  G    G+LG     D   P L++   L + + V +  G
Sbjct: 196 AAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCG 250

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+  V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 279 SEDGDVYSFGCGESASLG 296
              G +YSFG G +  LG
Sbjct: 311 PSSGRIYSFGLGGNGQLG 328



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 30  LGREVN--GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG E+    +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+     +  +
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +
Sbjct: 231 FV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + +I V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 289 FELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDTDGQLGL 118


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4073 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4130

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4189

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4190 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4245

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4246 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4306 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4356

Query: 339  NA 340
             A
Sbjct: 4357 TA 4358



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4243 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4294

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4295 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4349

Query: 220  AWHAA 224
              H+A
Sbjct: 4350 RCHSA 4354



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4275 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4327

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4360


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  112 bits (279), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 19/269 (7%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIA 160
           + Q A G+     ++ +  ++++  G    LG  T  +  EP  L+   ++    +  IA
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  + +   C      + + G G GG+LGHG   D   P+  E + L   +P+ ++AG 
Sbjct: 351 CGKYHSM---CLTRKKKILTWGQGQGGRLGHGDEDDVLVPK--EIYDLSKKKPIFISAGE 405

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            H+A + +   + TWG G YG LGHG +  E  PK+++ L+  + IHV+ G + T  ++ 
Sbjct: 406 SHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG 465

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK---QVNERVVQI---SLTN 334
            G VY+FG G+   LG N     +  R      P+ ++  K   +  E +VQ    ++  
Sbjct: 466 QGTVYAFGQGKYGKLGIN-----RKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILA 520

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  +N H+  L +SGK+Y++G   KG LG
Sbjct: 521 AAGYN-HSLCLAKSGKIYSWGYNGKGLLG 548



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR-LIEQFQLLNLQP 213
           P+ Q+A G  ++LA+        ++S G G  G LG G+R D   PR LI + +      
Sbjct: 290 PITQVACGSAHILAIT---EDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G +H+  + +  ++ TWG G+ G LGHG+E+   VPK +  L+  K I ++ G+ 
Sbjct: 347 EGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGES 406

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  +SE  ++Y++G G    LGH      +         P+L+  L Q    ++ +S  
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEK--------KPKLIEDLDQY--EIIHVSCG 456

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                  HT A+T  G +YAFG G  G+LGI     +     PE++
Sbjct: 457 A-----FHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKI 497



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 154/369 (41%), Gaps = 59/369 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G   +M ++   ++  +G+   G   +G +   LV  P+ +  L     +  + G   
Sbjct: 350 ACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLV--PKEIYDLSKKKPIFISAGESH 407

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +A +S +  +YT+  G   RLGH  + ++ +P  L+  L+   ++ ++ G  + LA+  Q
Sbjct: 408 SAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPK-LIEDLDQYEIIHVSCGAFHTLAITGQ 466

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE---KHPRLIEQFQLLNLQP-----------VVVAA 218
            +   VY+ G G  GKLG   +  E     P  I  F  + ++P           ++ AA
Sbjct: 467 GT---VYAFGQGKYGKLGINRKQREGVFSRPEKI-SFYKVGVEPQEMLVQDKNEAILAAA 522

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEE-------------CESVPKVVQALN-- 261
           G  H+  + + G++ +WG+   G LG   G EE                +P + + +   
Sbjct: 523 GYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRG 582

Query: 262 DVK--------AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           D+K         I VA G   T  ++  G+VY FG      L  +   D    R      
Sbjct: 583 DLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDK--DQTTFRKYKKQD 640

Query: 314 PQLVTSLKQVNERVVQISL-------TNSIYWNA----HTFALTESGKLYAFGAGDKGQL 362
                   Q  +   Q+SL       T  I + A    H FA++   +L+ +G  D+GQL
Sbjct: 641 QNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQL 700

Query: 363 GIELVNNQT 371
           G+  V++ T
Sbjct: 701 GLGFVSDFT 709



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 145/341 (42%), Gaps = 37/341 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           +RI   A G      IS   +++ +G++  G+   G   +     P L+  + +  +   
Sbjct: 668 VRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFV-SDFTAEPTLIRQIAHKNIQMI 726

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G+ ++A +S  G ++      + +LG     +   +    L+  L   P+  +A G  
Sbjct: 727 ACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLA--PIKSVACGPN 784

Query: 165 YLLALA-CQPS-----GMAVYSVGCGLGGKLGHGSRTDEKHPRLI----EQFQLLNLQPV 214
           ++LA+A   P      GM  YS G    G+LG GS+ D   P+ I    E+F+       
Sbjct: 785 HMLAIADYNPDHPIKDGMC-YSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFK------- 836

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA G   +  +    +V  WG  +Y C     ++ + +P+++QAL   +   +A     
Sbjct: 837 KVACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVD-IPQLLQALEQAQIKDIACSYKF 895

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
             V+++ G++  +G   +  +  N   D +   H  +        +++ +  +  IS   
Sbjct: 896 CSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITK----FPMRKFDFLMETISAGQ 951

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
           +     H+ A++    LY +G  + G+LG+    N+ E  N
Sbjct: 952 N-----HSAAVSVKRSLYTWGHAEGGRLGL----NEKEYKN 983



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 145/389 (37%), Gaps = 73/389 (18%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-------------VQ 84
           P     L    II  + GA  T+ I+  G VYAFG+  +G+                 + 
Sbjct: 439 PKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKIS 498

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT---EPND 141
             K+   PQ +        + AA G   +  L++ G++Y++ +     LG      E   
Sbjct: 499 FYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLP 558

Query: 142 VE----PHPLLGTLENI-----------------PVVQIAAGYCYLLALACQPSGMAVYS 180
           +E    P  L+G + NI                  V+Q+A G    ++L    +G  VY 
Sbjct: 559 IEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLT---NGGEVYV 615

Query: 181 VGCGLGGKLG--HGSRTDEKHPRLI--------------EQFQLL------NLQPVVVAA 218
            G    G+L       T  K+ +                EQ  L+       ++   +A 
Sbjct: 616 FGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETTVRINYIAC 675

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           G  H   + +   +  WG    G LG G   +  + P +++ +       +A GD  +  
Sbjct: 676 GGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAA 735

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS--LTNS 335
           VS  G+++  G  E+  LG      GQ  +   +L+  L+ +L  +       +  L  +
Sbjct: 736 VSAFGELFVTGNLENGKLGL-----GQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIA 790

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            Y   H     + G  Y++G   KGQLGI
Sbjct: 791 DYNPDHPI---KDGMCYSWGRNWKGQLGI 816



 Score = 44.7 bits (104), Expect = 0.077,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 24/259 (9%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAA-GAGRTMLISDA--------GQVYAF 71
           N  NGK  L      G  L    +Q +  I++ A G    + I+D         G  Y++
Sbjct: 747 NLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSW 806

Query: 72  GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
           G++  G+   G+   +    P+ + + K  F  + A G  F+  L+   +VY   WGN+ 
Sbjct: 807 GRNWKGQ--LGIGSKEDSNVPKKIHNAKERFK-KVACGQDFSIGLTYGNQVYL--WGNNK 861

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
                    DV+   LL  LE   +  IA  Y +   L  +     +   G  L  ++  
Sbjct: 862 YFCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGE---ILIWGSYLTDRIKQ 918

Query: 192 GSRTDEKHPR--LIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
             + D+K      I +F +     ++  ++AG  H+A V     + TWG    G LG   
Sbjct: 919 NQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNE 978

Query: 248 EECESV---PKVVQALNDV 263
           +E ++    P +VQ+++D+
Sbjct: 979 KEYKNAKIEPILVQSIHDI 997



 Score = 42.7 bits (99), Expect = 0.27,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 48/306 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----------VTSPQLVES 97
           +IQ A G   T+ +++ G+VY FG +++G+       T               + Q ++S
Sbjct: 594 VIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDS 653

Query: 98  LKNIFVVQ-----------AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
            + + +++            A G      +SR   ++ +   ++ +LG     +      
Sbjct: 654 SEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPT 713

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+  + +  +  IA G  Y  A++   +   ++  G    GKLG G    +     +  F
Sbjct: 714 LIRQIAHKNIQMIACGDNYSAAVS---AFGELFVTGNLENGKLGLGQALKKG---FLLSF 767

Query: 207 QLL-NLQPV-VVAAGAWHAAVVG--------QDGRVCTWGWGRYGCLGHGNEECESVPKV 256
            L+ NL P+  VA G  H   +         +DG   +WG    G LG G++E  +VPK 
Sbjct: 768 TLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKK 827

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           +    + +   VA G   +  ++    VY +G        +    D +  +  ++  PQL
Sbjct: 828 IHNAKE-RFKKVACGQDFSIGLTYGNQVYLWG-------NNKYFCDSKITKDVDI--PQL 877

Query: 317 VTSLKQ 322
           + +L+Q
Sbjct: 878 LQALEQ 883


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4131

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4190

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4191 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4246

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L  V    VA G   T  ++
Sbjct: 4247 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA 4306

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4307 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4357

Query: 339  NA 340
             A
Sbjct: 4358 TA 4359



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4048 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4108 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4165

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4166 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4212

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4213 GDYGKLGL---GNSTAKSSPQKVDV 4234



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4145

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4146 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4201

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4202 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4261

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V  L  V    V +          HT AL 
Sbjct: 4262 F--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEHTLALA 4306

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4307 SNGDVYAWGSNSEGQLGLGHTNHVRE 4332



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4124 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4183

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4184 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4243

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V   P+L     + +  +
Sbjct: 4244 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PVLA---GVVIEDV 4295

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4296 AVGAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAG 4350

Query: 220  AWHAA 224
              H+A
Sbjct: 4351 RCHSA 4355



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4275

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4276 RNH--NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4328

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4329 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4361


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4078 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4135

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4136 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4194

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4195 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4250

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4251 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALA 4310

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4311 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4361

Query: 339  NA 340
             A
Sbjct: 4362 TA 4363



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4169

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4216

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKIDV 4238



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4150 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4205

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4206 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4266 F--GQDRLIG---LPEGRARNHNR---PQQIPLLAGVIIEDVAVG-------AEHTLALA 4310

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4311 SNGDVYAWGSNSEGQLGLGHTNHVRE 4336



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4128 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4187

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ ++ L  I + + 
Sbjct: 4188 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV 4247

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   PLL     + +  +
Sbjct: 4248 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PLLA---GVIIEDV 4299

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4300 AVGAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ--ISAG 4354

Query: 220  AWHAA 224
              H+A
Sbjct: 4355 RCHSA 4359



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4220 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4279

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4280 RNH--NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4332

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4333 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4365


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4073 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4130

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4189

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4190 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4245

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4246 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4306 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4356

Query: 339  NA 340
             A
Sbjct: 4357 TA 4358



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4243 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4294

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4295 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4349

Query: 220  AWHAA 224
              H+A
Sbjct: 4350 RCHSA 4354



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4275 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4327

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4360


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4067 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4124

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4125 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4183

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4184 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4239

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4240 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4299

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4300 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4350

Query: 339  NA 340
             A
Sbjct: 4351 TA 4352



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4205

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKIDV 4227



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4195 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4299

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4300 SNGDVYAWGSNSEGQLGLGHTNHVRE 4325



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4117 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4174

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4175 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4233

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4234 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4290

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4291 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4343



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4209 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4268

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4269 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4321

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4322 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4354


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4042 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4099

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4100 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4158

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4159 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4214

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4215 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4274

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4275 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4325

Query: 339  NA 340
             A
Sbjct: 4326 TA 4327



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4016 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4075

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4076 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4133

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4134 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4180

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4181 GDYGKLGL---GNSTAKSSPQKVDV 4202



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4055

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4056 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4113

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4114 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4169

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4170 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4229

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4230 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4274

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4275 SNGDVYAWGSNSEGQLGLGHTNHVRE 4300



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4092 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4151

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4152 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4211

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4212 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4263

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4264 AVGAEHTLALA---SNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4318

Query: 220  AWHAA 224
              H+A
Sbjct: 4319 RCHSA 4323



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4184 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4243

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4244 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4296

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4297 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4329


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4073 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4130

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4189

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4190 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4245

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4246 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4306 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4356

Query: 339  NA 340
             A
Sbjct: 4357 TA 4358



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4047 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4106

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4107 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4164

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4165 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4211

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4212 GDYGKLGL---GNSTAKSSPQKVDV 4233



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4086

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4087 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4144

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4145 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4200

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4201 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4260

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4261 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4305

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4306 STGDVYAWGSNSEGQLGLGHTNHVRE 4331



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4242

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4243 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4294

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4295 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4349

Query: 220  AWHAA 224
              H+A
Sbjct: 4350 RCHSA 4354



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4275 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4327

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4328 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4360


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 152/325 (46%), Gaps = 26/325 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKARKRPEHVGALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       V     + +L  I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G    ++  P++I+   LL +    +AAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKS--LLGIPFAQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  ++    VP ++++L   K +H+  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSVVT----------QITCGRQ-----HTTAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ 370
             SG++Y+FG G  GQLG    +N+
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNR 335



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVE 96
           P +  +L    I+  + G   T+ ++D GQVYA+G  + G+   G+ GT + V  P+ + 
Sbjct: 75  PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL--GLPGTEECVRVPRNIR 132

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  I +VQ A G + +  LS+   V  FSWG +   +LG   E        ++ +L  I
Sbjct: 133 SLSEIQIVQVACGYYHSLALSKGSEV--FSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGI 190

Query: 155 PVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           P  QIAAG  + ++L L    SG A++  G    G+LG     D   P L++    L  Q
Sbjct: 191 PFAQIAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDDNDRYVPTLLKS---LRSQ 242

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            VV +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +  G
Sbjct: 243 KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCG 302

Query: 272 -DYTTFVVSEDGDVYSFGCGESASLG 296
             +TT  V   G +YSFG G +  LG
Sbjct: 303 RQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 148/314 (47%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       E    +G L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGHEKARKRPEH---VGALDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLATDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  G+    + PR I    L  +Q V VA G +H+  + +   V +WG  +YG LG G
Sbjct: 115 QLGLPGTEECVRVPRNIR--SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + ++ P+++++L  +    +A G   +FV++  G ++ +G  +   LG N       
Sbjct: 173 YEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DDN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  +++VV I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PTLLKSLR--SQKVVHICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   RSL  I+I+Q A G   ++ +S   +V+++G++ +G+   G +  K  TSPQ+++
Sbjct: 127 VPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK-QTSPQMIK 185

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  I   Q A G   + VL+  G +  F WG +   +LG + + ND     LL +L + 
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRSQ 242

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+     
Sbjct: 243 KVVHICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVT 297

Query: 215 VVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            +  G  H  A V   GR+ ++G G  G LG G       P  V+
Sbjct: 298 QITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL+  +++    G   T  ++  G V+ FG   +G+   G   T    +P+ V 
Sbjct: 232 VPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVF 289

Query: 97  SLKNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            L    V Q   G    TA +   GR+Y+F  G + +LG  T  N   P  + G+
Sbjct: 290 ELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGS 344


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 144/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
                      G G+  A  L P+L+  L     R+V IS+ +S     H  +L+   ++
Sbjct: 643 CL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLSLSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLSLSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQP 173
           L+ I + QI+AG  + LA    P
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALP 737


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 38/325 (11%)

Query: 58  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           RTML         +G  S G+         +V  PQ+   + +  V + A G   +  L 
Sbjct: 453 RTML--------CWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL 504

Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
            +G VYT       +LGH  E N  E    +G L +  +V +A G  + LAL+       
Sbjct: 505 EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALS---DRGQ 558

Query: 178 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TW
Sbjct: 559 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 615

Query: 236 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           G   +G LG G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  
Sbjct: 616 GKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 675

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG +   D +   H  +L  Q          +VV IS         HT  LT+SG ++ F
Sbjct: 676 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 720

Query: 355 GAGDKGQLGIELVNNQTERGNPERV 379
           GAG  GQLG + +N++    NP RV
Sbjct: 721 GAGSCGQLGHDSMNDEV---NPRRV 742



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 154/331 (46%), Gaps = 32/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 534

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 535 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 594

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDEKHPRLIEQFQLLNLQP 213
           Q++ G  + LALA   +    ++ G    G+LG G    S+T  +  R +E   L     
Sbjct: 595 QVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ--- 648

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+ 
Sbjct: 649 --VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 706

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+  
Sbjct: 707 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACG 756

Query: 334 NSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  HT A    SG +YAFG G +GQLG
Sbjct: 757 RQ-----HTLAFVPSSGLIYAFGCGARGQLG 782



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 520 LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 577

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 578 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQ- 636

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 637 RVRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 690

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 691 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 750

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 751 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 782



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 625 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 682

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 683 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 742

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 743 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 798


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNIRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNIRQISAGRCHSAAWTAPP 4362


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 144/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
                      G G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 643 CL---------GCGSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 155/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLGH  + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH-GDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++ V   AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKV--CAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V+ + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 146/301 (48%), Gaps = 18/301 (5%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 3548 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 3605

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 3606 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 3664

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + +A++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 3665 ACGLNHTVAVSMD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACG 3720

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L+ V    +A G   T  +S
Sbjct: 3721 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALS 3780

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
              GDVY++G      LG      G  N   +V  P L+T L+  N R +     +S  W 
Sbjct: 3781 STGDVYAWGSNSEGQLGL-----GHTN---HVREPTLITVLQGKNIRQISAGRCHSAAWT 3832

Query: 340  A 340
            A
Sbjct: 3833 A 3833



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 3561

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 3562 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 3619

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   +   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 3620 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVS 3675

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 3676 MDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 3735

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ V  L  V    + +          HT AL+
Sbjct: 3736 F--GQDRLIG---LPEGRARNHNR---PQQVPVLSGVFIEDIAVG-------AEHTLALS 3780

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 3781 STGDVYAWGSNSEGQLGLGHTNHVRE 3806



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3522 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3581

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 3582 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 3639

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 3640 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSMDGSMVWAFGD 3686

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VDI
Sbjct: 3687 GDYGKLGL---GNSTAKSSPQKVDI 3708



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 3690 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3749

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  +F+   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 3750 RNH--NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVY--AWGSNSEGQLGLGH---TN 3802

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 3803 HVREPTLITVLQGKNIRQISAGRCHSAAWTAPP 3835



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 3598 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 3657

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 3658 GYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV 3717

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V        L  + +  I
Sbjct: 3718 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQVP------VLSGVFIEDI 3769

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LAL+   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG
Sbjct: 3770 AVGAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ--ISAG 3824

Query: 220  AWHAA 224
              H+A
Sbjct: 3825 RCHSA 3829



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVSIQQISAGTSHSLAWTALPRDRQV 742


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 159/332 (47%), Gaps = 40/332 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L++  G+V+ +G++  G   +G+   +  + P LVE L    V   
Sbjct: 128 LDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEFLAVSHVDFV 185

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G + T  ++    +YT  WG    N   LGH T+ +   P  ++G+LE + V+ +A G
Sbjct: 186 ACGEYHTCAITSSNDLYT--WGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACG 243

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAW 221
             +  ALA   S   +Y+ G G  G LGHG R    +PR   + QLL+ L+ + VA G W
Sbjct: 244 -TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLRTIKVACGVW 297

Query: 222 HAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           H A    V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D     +A G
Sbjct: 298 HTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACG 357

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V++ G      LG N  +DG        + P LV   + V E V +IS
Sbjct: 358 HNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RLVGEFVEEIS 407

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                Y   HT  LT   +++++G G  G+LG
Sbjct: 408 C--GAY---HTVVLTSRNEVFSWGRGSNGRLG 434



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +E+   + V Q A G    A+++R+G V+T  WG +   RLGH  + +   PH 
Sbjct: 116 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 172

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 204
           L+  L    V  +A G  +  A+    S   +Y+ G G+   G LGHG+      P+ + 
Sbjct: 173 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 229

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  LQ + VA G WH+A+   +G++ T+G G YG LGHG+ E    P+ VQ L+ ++
Sbjct: 230 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 288

Query: 265 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTP 314
            I VA G + T     V+S+ G       ++++G G+   LGH       GN+   +L P
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 340

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             V+SL   N    Q++  +++     T ALT SG ++  G    GQLG
Sbjct: 341 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 382



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 18/243 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G++++  A G   + L +  G++Y FG  ++G   +G + +  V  P+ V+ L  + 
Sbjct: 231 SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLR 288

Query: 103 VVQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            ++ A G + TA    V+S+ G      +++T+  G+  RLGH  +   + P   + +L 
Sbjct: 289 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLI 347

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    Q+A G+   +AL    +   V+++G    G+LG+ S +D   P L+ Q +L+   
Sbjct: 348 DYNFHQLACGHNMTVALT---TSGHVFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEF 402

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              ++ GA+H  V+     V +WG G  G LGHG+ E    P +++AL D     ++ G 
Sbjct: 403 VEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGS 462

Query: 273 YTT 275
             T
Sbjct: 463 NFT 465



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 23/279 (8%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGN 110
           A G   T  I+ +  +Y +G   F     G  GT +      ++V SL+ + V+  A G 
Sbjct: 186 ACGEYHTCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGT 244

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           + +A+ +  G++YTF  G    LGH    + V P  +   L  +  +++A G  +  A+ 
Sbjct: 245 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIV 303

Query: 171 -------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
                     S   +++ G G   +LGHG++     P  +      N   +  A G    
Sbjct: 304 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMT 361

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDG 282
             +   G V T G   YG LG+ + +   +P +VQ  L       ++ G Y T V++   
Sbjct: 362 VALTTSGHVFTMGGTAYGQLGNPSSD-GVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRN 420

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +V+S+G G +  LGH  + D +         P L+ +LK
Sbjct: 421 EVFSWGRGSNGRLGHGDVEDRKA--------PTLIEALK 451


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4060 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4117

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4118 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4176

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4177 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4232

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 4233 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 4292

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4293 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4343

Query: 339  NA 340
             A
Sbjct: 4344 TA 4345



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4198

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKIDV 4220



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4188 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 4292

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 SNGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4167

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4168 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4226

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4227 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 4283

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4284 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4336



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4202 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4261

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4262 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4314

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4315 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4347


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 35/329 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +     G+  ++ I D G+++ +G +  G   +  + TK  ++P LV+SL N+ 
Sbjct: 34  ALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLVKSLANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTL-------ENI 154
           +VQAAIG +    +  +GR Y  +WG +       EP+  E   P+   +       + +
Sbjct: 93  IVQAAIGAWHCLAVDDQGRAY--AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQL 150

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V++     G     G       P  ++  + + L   
Sbjct: 151 TVRQVAAGGTHSVVLTRE---GYVWT----WGQPWPPGDIKQISVPVRVQGLENVRL--- 200

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+D+  + +A G + 
Sbjct: 201 -IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWH 259

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++ +G+VY +G GE   LG         N  ++ + PQ V  L    E ++Q+S   
Sbjct: 260 STALTNEGEVYGWGRGEHGRLGFGD------NDKSSKMLPQKVNLLP--GEDIIQVSCGG 311

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +     H+ ALT  G++++FG GD G+LG
Sbjct: 312 T-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 31/278 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQG 85
           +   TP   +SL  ++I+QAA GA   + + D G+ YA+G + +G+        E G   
Sbjct: 77  KTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPV 136

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-- 143
            + +  P+     + + V Q A G   + VL+REG V+T+        G    P D++  
Sbjct: 137 RRDIVIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTW--------GQPWPPGDIKQI 186

Query: 144 --PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  + G LEN+ ++ + A       LA +  G  +++ G    G+LG G      +P 
Sbjct: 187 SVPVRVQG-LENVRLIAVGA----FHNLALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPI 240

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQA 259
            ++    L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  +P+ V  
Sbjct: 241 PVQGLDDLTL--VDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           L     I V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 299 LPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG G +E + +  VV AL       V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        TP LV SL  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSLVKSLANV--KIVQAAIG---AW--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E   ++T  G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A+G     L++  G+V+ +G++S G   +G+   K    PQLVE L    V   
Sbjct: 264 LDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGID--KDFGRPQLVEFLAVTNVESV 321

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G   T  +S    +  FSWG    N   LGH T+ +   P  + G LE + V+ IA G
Sbjct: 322 ACGENHTCAVSISDEL--FSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACG 379

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAW 221
             +  ALA   S   +++ G G  G LGHG+R    +P+   + QLL+ L+ + VA G W
Sbjct: 380 -TWHSALAT--SNGKLFTFGDGTFGVLGHGNRESVAYPK---EVQLLSGLKTITVACGVW 433

Query: 222 HAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           H A    V  Q G      ++ TWG G    LGHGN+E    P  V  L +     +A G
Sbjct: 434 HTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACG 493

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G +++ G  E   LG N+++DG+         P LV     V E V +IS
Sbjct: 494 HTMTIALTTSGHLFTMGGTEFGQLG-NSLSDGK--------IPILVQD-ALVGEFVEEIS 543

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                    H  ALT   +LY +G G  G+LG
Sbjct: 544 CGAH-----HVAALTSRSELYTWGKGANGRLG 570



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 155/326 (47%), Gaps = 45/326 (13%)

Query: 62  ISDAGQVYAFGK---DSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           I   G VY +G+   D+      G Q   T  V  P+ +ES   + V Q A G    A++
Sbjct: 220 IESLGDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279

Query: 117 SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +R+G V+T  WG ++  RLGH  + +   P  L+  L    V  +A G  +  A++    
Sbjct: 280 TRQGEVFT--WGEESGGRLGHGIDKDFGRPQ-LVEFLAVTNVESVACGENHTCAVSISDE 336

Query: 175 ----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
               G   Y+VG      LGHG+      P+ I    L  LQ + +A G WH+A+   +G
Sbjct: 337 LFSWGDGKYNVGL-----LGHGTDVSHWVPKRING-PLEGLQVISIACGTWHSALATSNG 390

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------- 280
           ++ T+G G +G LGHGN E  + PK VQ L+ +K I VA G + T  + E          
Sbjct: 391 KLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNVS 450

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
              ++++G G+   LGH       GN+    L P  V++L + N    QI+  +++    
Sbjct: 451 SRKLFTWGDGDKYRLGH-------GNKET-YLQPTCVSTLIEYN--FHQIACGHTM---- 496

Query: 341 HTFALTESGKLYAFGAGDKGQLGIEL 366
            T ALT SG L+  G  + GQLG  L
Sbjct: 497 -TIALTTSGHLFTMGGTEFGQLGNSL 521



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 18/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++I  A G   + L +  G+++ FG  +FG   +G + +  V  P+ V+ L  +  
Sbjct: 368 LEGLQVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRES--VAYPKEVQLLSGLKT 425

Query: 104 VQAAIGNFFTAVLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           +  A G + TA +              +++T+  G+  RLGH  +   ++P   + TL  
Sbjct: 426 ITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPT-CVSTLIE 484

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               QIA G+   +AL    SG  ++++G    G+LG+ S +D K P L+ Q  L+    
Sbjct: 485 YNFHQIACGHTMTIALTT--SGH-LFTMGGTEFGQLGN-SLSDGKIPILV-QDALVGEFV 539

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ GA H A +     + TWG G  G LGHG+ +    P +V+AL +    +++ G  
Sbjct: 540 EEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSS 599

Query: 274 TTFVV 278
            T  +
Sbjct: 600 FTSCI 604


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 25/302 (8%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G        S +     +
Sbjct: 4074 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG-------NSDRQRRPXQ 4126

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4127 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4185

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4186 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4241

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4242 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4301

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4302 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4352

Query: 339  NA 340
             A
Sbjct: 4353 TA 4354



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 32/326 (9%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4087

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH    +D +  P  G      VVQ++ G+ +  
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGN--SDRQRRPXQGE----EVVQMSCGFKHS- 4140

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4141 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4196

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4197 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4256

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4257 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4301

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4302 SNGDVYAWGSNSEGQLGLGHTNHVRE 4327



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 125/279 (44%), Gaps = 44/279 (15%)

Query: 93   QLVESLKNIFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            QL E+ +N+ V  AA           G   T V+   G V     G+  RLG     +D+
Sbjct: 4008 QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNS-DDL 4066

Query: 143  EPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                ++  L+   V Q+       G+    ++A   SG  V+S G G  GKLGHG+   +
Sbjct: 4067 HVLTVISALQGFVVTQLVTSCGSDGH----SMALTESG-EVFSWGDGDYGKLGHGNSDRQ 4121

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            + P   E+        V ++ G  H+AVV  DG++ T+G G YG LG GN   + +P+ V
Sbjct: 4122 RRPXQGEEV-------VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV 4174

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
             AL   +   VA G   T  VS DG  V++FG G+   L       G GN  A   +PQ 
Sbjct: 4175 TALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL-------GLGNSTAKS-SPQK 4226

Query: 317  VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
            +  L  +  + V      S+       ALT+ G +Y FG
Sbjct: 4227 IDVLCGIGIKKVACGTQFSV-------ALTKDGHVYTFG 4258



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 9/231 (3%)

Query: 42   RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
            R  QG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +L+  
Sbjct: 4123 RPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTALEGY 4180

Query: 102  FVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
             + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I + ++A
Sbjct: 4181 QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGIKKVA 4239

Query: 161  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
             G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V  GA
Sbjct: 4240 CGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV--GA 4294

Query: 221  WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4295 EHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4345



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4211 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4270

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4271 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4323

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4324 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4356


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSV--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSVDGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 4203 VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4298

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4362


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +    D +LG       +     + +L +I +VQIA GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+    G  V+S G    G+LG G     +  P+LI+   LL +    VAAG  H+ V+
Sbjct: 151 ALS---KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKS--LLGIPFTQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 13/258 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL--GLPGTEEYIRVPRNIKSLTDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP  Q+
Sbjct: 138 QIVQIACGYYHSLALSKGSEV--FSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQV 195

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           AAG  +   L    SG A++  G    G+LG     D   P L++   L + + V +  G
Sbjct: 196 AAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCG 250

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+  V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 279 SEDGDVYSFGCGESASLG 296
              G +YSFG G +  LG
Sbjct: 311 PSSGRIYSFGLGGNGQLG 328



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 30  LGREVN--GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG E+    +P   +SL GI   Q AAG   + +++ +G ++ +G++ FG+     +  +
Sbjct: 171 LGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            V  P L++SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +
Sbjct: 231 FV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + +I V QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 289 FELMGSI-VTQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 235 WGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  +EE    P+      + K   V  G   T  V +DG VY+ GC + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH      + +R      P+ V +L   N  +V +S        AHT AL + G++Y
Sbjct: 64  GQLGH------EKSRKK----PEQVVALDAQN--IVAVSCG-----EAHTLALNDKGQVY 106

Query: 353 AFGAGDKGQLGI 364
           A+G    GQLG+
Sbjct: 107 AWGLDTDGQLGL 118


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 159/332 (47%), Gaps = 40/332 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L++  G+V+ +G++  G   +G+   +  + P LVE L    V   
Sbjct: 266 LDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGID--RDFSRPHLVEFLAVSHVDFV 323

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G + T  ++    +YT  WG    N   LGH T+ +   P  ++G+LE + V+ +A G
Sbjct: 324 ACGEYHTCAITSSNDLYT--WGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACG 381

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAW 221
             +  ALA   S   +Y+ G G  G LGHG R    +PR   + QLL+ L+ + VA G W
Sbjct: 382 -TWHSALAT--SNGKLYTFGDGTYGVLGHGDRESVVYPR---EVQLLSGLRTIKVACGVW 435

Query: 222 HAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           H A    V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D     +A G
Sbjct: 436 HTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACG 495

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V++ G      LG N  +DG        + P LV   + V E V +IS
Sbjct: 496 HNMTVALTTSGHVFTMGGTAYGQLG-NPSSDG--------VIPCLVQD-RLVGEFVEEIS 545

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                Y   HT  LT   +++++G G  G+LG
Sbjct: 546 C--GAY---HTVVLTSRNEVFSWGRGSNGRLG 572



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 36/289 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +E+   + V Q A G    A+++R+G V+T  WG +   RLGH  + +   PH 
Sbjct: 254 VLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFT--WGEECGGRLGHGIDRDFSRPH- 310

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIE 204
           L+  L    V  +A G  +  A+    S   +Y+ G G+   G LGHG+      P+ + 
Sbjct: 311 LVEFLAVSHVDFVACGEYHTCAIT---SSNDLYTWGDGIFNSGILGHGTDISHWIPKRVV 367

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  LQ + VA G WH+A+   +G++ T+G G YG LGHG+ E    P+ VQ L+ ++
Sbjct: 368 G-SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLR 426

Query: 265 AIHVATGDYTTF----VVSEDGD------VYSFGCGESASLGHNAIADGQGNRHANVLTP 314
            I VA G + T     V+S+ G       ++++G G+   LGH       GN+   +L P
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGH-------GNKETYLL-P 478

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             V+SL   N    Q++  +++     T ALT SG ++  G    GQLG
Sbjct: 479 TCVSSLIDYN--FHQLACGHNM-----TVALTTSGHVFTMGGTAYGQLG 520



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 18/243 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G++++  A G   + L +  G++Y FG  ++G   +G + +  V  P+ V+ L  + 
Sbjct: 369 SLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRES--VVYPREVQLLSGLR 426

Query: 103 VVQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            ++ A G + TA    V+S+ G      +++T+  G+  RLGH  +   + P   + +L 
Sbjct: 427 TIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLP-TCVSSLI 485

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    Q+A G+   +AL    +   V+++G    G+LG+ S +D   P L+ Q +L+   
Sbjct: 486 DYNFHQLACGHNMTVALT---TSGHVFTMGGTAYGQLGNPS-SDGVIPCLV-QDRLVGEF 540

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              ++ GA+H  V+     V +WG G  G LGHG+ E    P +++AL D     ++ G 
Sbjct: 541 VEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGS 600

Query: 273 YTT 275
             T
Sbjct: 601 NFT 603



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 23/279 (8%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGN 110
           A G   T  I+ +  +Y +G   F     G  GT +      ++V SL+ + V+  A G 
Sbjct: 324 ACGEYHTCAITSSNDLYTWGDGIFNSGILG-HGTDISHWIPKRVVGSLEGLQVLSVACGT 382

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           + +A+ +  G++YTF  G    LGH    + V P  +   L  +  +++A G  +  A+ 
Sbjct: 383 WHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV-QLLSGLRTIKVACGVWHTAAIV 441

Query: 171 -------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
                     S   +++ G G   +LGHG++     P  +      N   +  A G    
Sbjct: 442 EVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQL--ACGHNMT 499

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDG 282
             +   G V T G   YG LG+ + +   +P +VQ  L       ++ G Y T V++   
Sbjct: 500 VALTTSGHVFTMGGTAYGQLGNPSSD-GVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRN 558

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +V+S+G G +  LGH  + D +         P L+ +LK
Sbjct: 559 EVFSWGRGSNGRLGHGDVEDRKA--------PTLIEALK 589


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 18/301 (5%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4004 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4061

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               V+Q + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4062 GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4120

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4121 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4176

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    +A G   T  ++
Sbjct: 4177 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALA 4236

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
              GDVY++G      LG      G  N   +V  P L+T L+  N R +     +S  W 
Sbjct: 4237 STGDVYAWGSNSEGQLGL-----GHTN---HVREPTLITILQGKNIRQISAGRCHSAAWT 4288

Query: 340  A 340
            A
Sbjct: 4289 A 4289



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 3978 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4037

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + I ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4038 GDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4095

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4096 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4142

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4143 GDYGKLGL---GNSTAKSSPQKVDV 4164



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4017

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   V+Q++ G+ +  
Sbjct: 4018 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHS- 4075

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4076 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4131

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4132 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4191

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    + +          HT AL 
Sbjct: 4192 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDIAVG-------AEHTLALA 4236

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4237 STGDVYAWGSNSEGQLGLGHTNHVRE 4262



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  +IQ + G   + +++  G+++ FG                         
Sbjct: 4054 PRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4113

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4114 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4173

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  I
Sbjct: 4174 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDI 4225

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P LI   Q  N++   ++AG
Sbjct: 4226 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQ--ISAG 4280

Query: 220  AWHAA 224
              H+A
Sbjct: 4281 RCHSA 4285



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 715 LDGVAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4146 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4205

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4206 RNH--NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4258

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4259 HVREPTLITILQGKNIRQISAGRCHSAAWTASP 4291


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V +S+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + V+ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V V+ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 162/362 (44%), Gaps = 44/362 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + +   + G    ML++  G+ +++G+++ G   +G +    V+ P+L++
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETD--VSHPKLIK 355

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           + K + V   A G + +  ++  G +YT  WG+ A+    LGH +E +   P  + G +E
Sbjct: 356 NFKGMNVELIACGEYHSCAVTSSGDLYT--WGDGAKSSGLLGHRSEASHWIPKKVCGLME 413

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V  ++ G  +   +    S   +++ G G  G LGHG R+    PR +E F    L+
Sbjct: 414 GLRVSHVSCGPWHTALIT---SAGRLFTFGDGTFGALGHGDRSGCITPREVETFN--GLK 468

Query: 213 PVVVAAGAWHAAVV-----GQDGR--------VCTWGWGRYGCLGHGNEECESVPKVVQA 259
            + VA G WH A V     G D R        + TWG G  G LGHG+ +    P+ + A
Sbjct: 469 TLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITA 528

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L D     VA     T  ++  G VY+ G      LG            AN ++P  V  
Sbjct: 529 LVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPL---------ANGMSPICVED 579

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              V+  V +IS  +      H   LT   ++Y +G G+ GQLG     N+     P  V
Sbjct: 580 Y-LVDSTVEEISCGSH-----HVAVLTSRTEVYTWGKGENGQLGHGDCENKC---TPTLV 630

Query: 380 DI 381
           DI
Sbjct: 631 DI 632



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 137/300 (45%), Gaps = 36/300 (12%)

Query: 85  GTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPND 141
           GT++   +P+ +ES   + V   + GN    +++++G    FSWG +A  RLGH  E  D
Sbjct: 291 GTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEA--FSWGEEAGGRLGHGAE-TD 347

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           V    L+   + + V  IA G  +  A+      +  +  G    G LGH S      P+
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVT-SSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            +    +  L+   V+ G WH A++   GR+ T+G G +G LGHG+      P+ V+  N
Sbjct: 407 KVCGL-MEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFN 465

Query: 262 DVKAIHVATGDYTTFVVSE-------------DGDVYSFGCGESASLGHNAIADGQGNRH 308
            +K + VA G + T  V E              G ++++G G+   LGH       G+  
Sbjct: 466 GLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGH-------GDNK 518

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
              L PQ +T+L       V  S +      A T ALT +G++Y  G+   GQLG  L N
Sbjct: 519 PR-LAPQCITAL-------VDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLAN 570



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 29/269 (10%)

Query: 41  CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           C  ++G+R+   + G   T LI+ AG+++ FG  +FG   +G +      +P+ VE+   
Sbjct: 409 CGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSG--CITPREVETFNG 466

Query: 101 IFVVQAAIGNFFTAVL--------SR-----EGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  ++ A G + TA +        SR      G ++T+  G+  +LGH      + P   
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQ-C 525

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           +  L +    ++A  Y   +AL    +   VY++G  + G+LG     +   P  +E + 
Sbjct: 526 ITALVDKSFSEVACSYAMTVALT---TTGRVYTMGSNVYGQLG-CPLANGMSPICVEDY- 580

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L++     ++ G+ H AV+     V TWG G  G LGHG+ E +  P +V  L D +   
Sbjct: 581 LVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKR 640

Query: 268 VATGDYTT-------FVVSEDGDVYSFGC 289
           +  G   +       + +S D  +  FGC
Sbjct: 641 IVCGSNFSAAICVHNWALSADNSI-CFGC 668


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 38/349 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +     G+  ++ I D G+++ +G +  G   +  + TK  ++P LV+SL ++ 
Sbjct: 34  ALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE-TKTESTPSLVKSLASVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTL-------ENI 154
           +VQAAIG +    +  +GR Y  +WG +       EP+  E   P+   +         +
Sbjct: 93  IVQAAIGGWHCLAVDDQGRAY--AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQL 150

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V++     G     G       P  ++  + + L   
Sbjct: 151 TVRQVAAGGTHSVVLTRE---GYVWT----WGQPWPPGDIKQISIPVRVQGLENVRL--- 200

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+D+  + +A G + 
Sbjct: 201 -IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWH 259

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++ +G+VY +G GE   LG         N  ++ + PQ V  L    E ++Q+S   
Sbjct: 260 STALTNEGEVYGWGRGEHGRLGFGD------NDKSSKMLPQKVNLL--AGEDIIQVSCGG 311

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           +     H+ ALT  G++++FG GD G+LG      +   G P  + ID+
Sbjct: 312 T-----HSVALTRDGRIFSFGRGDHGRLGY---GRKVTTGQPLELPIDI 352



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 31/278 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQG 85
           +   TP   +SL  ++I+QAA G    + + D G+ YA+G + +G+        E G   
Sbjct: 77  KTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPV 136

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-- 143
            + +  P+       + V Q A G   + VL+REG V+T+        G    P D++  
Sbjct: 137 RRDIVIPK--RCAPQLTVRQVAAGGTHSVVLTREGYVWTW--------GQPWPPGDIKQI 186

Query: 144 --PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  + G LEN+ ++ + A       LA +  G  +++ G    G+LG G       P 
Sbjct: 187 SIPVRVQG-LENVRLIAVGA----FHNLALKEDG-TLWAWGNNEYGQLGTGDTQPRSFPI 240

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQA 259
            ++    L L  V +AAG WH+  +  +G V  WG G +G LG G+ +  S  +P+ V  
Sbjct: 241 PVQGLDDLTL--VDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           L     I V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 299 LAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG G +E + +  VV+AL       V  G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        TP LV SL  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSLVKSLASV--KIVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E   ++T  G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPSKDET--GRPVRRDI 140


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 150/324 (46%), Gaps = 35/324 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G   + +++  G+V+ +G+++ G    G+   K VT P+LVE+L    V   A G F 
Sbjct: 282 ACGVRHSAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEALAATTVDLVACGEFH 339

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           T  ++ +G +YT+  G  N   LG+ T+ +   P  + G LE + V  +A G  +   ++
Sbjct: 340 TCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS 399

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-- 228
              S   +++ G G  G LGHG +    +PR ++   L  L+ + VA G WH A V +  
Sbjct: 400 ---STGQLFTFGDGTFGVLGHGDKKSISYPREVDS--LTGLRTIAVACGVWHTAAVVEVI 454

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++
Sbjct: 455 MTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLT 514

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V++ G      L         GN HA+   P LV   K + E   +++     Y  
Sbjct: 515 TSGQVFTVGSSVYGQL---------GNPHADGKQPCLVED-KLLGESAEEVAC--GAY-- 560

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 561 -HVMVLTSKNEVYTWGKGANGRLG 583



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   A G   T LIS  GQ++ FG  +FG   +G +  K ++ P+ V+SL  +  
Sbjct: 380 LEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRT 437

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 438 IAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALI 496

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V++VG  + G+LG+    D K P L+E  +LL   
Sbjct: 497 DYNFHKIACGHSITIGLTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGES 551

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              VA GA+H  V+     V TWG G  G LGHG+ E    P +V++L D     +A G
Sbjct: 552 AEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 610



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 33/285 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   +     A G   +A+++R+G V+T+      RLG     +  +P  L+  L
Sbjct: 267 PKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPR-LVEAL 325

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLL 209
               V  +A G  +  A+        +Y+ G G+   G LG+G+      P+ I    L 
Sbjct: 326 AATTVDLVACGEFHTCAVTMDGE---LYTWGDGVHNAGLLGNGTDVSHWMPKRISGI-LE 381

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            LQ   VA G WH A++   G++ T+G G +G LGHG+++  S P+ V +L  ++ I VA
Sbjct: 382 GLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVA 441

Query: 270 TGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            G + T  V E            G ++++G G+   LGH       G++    L P  V 
Sbjct: 442 CGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTCVP 493

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +L   N    +I+  +SI     T  LT SG+++  G+   GQLG
Sbjct: 494 ALIDYN--FHKIACGHSI-----TIGLTTSGQVFTVGSSVYGQLG 531


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA   S    ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G YG LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 25/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +L   +I+    GA  T+  S++  +VY++G   FG   +G      +  PQ + 
Sbjct: 58  PTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFI--PQPIR 115

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ + + Q A G+     ++ EG V ++    + +LG  T  + + P  +  T + +P+
Sbjct: 116 ALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ-TFQGVPI 174

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +AAG  + +A+        +Y  G G  G LG G R D   P   E+  +   + V+V
Sbjct: 175 KMVAAGAEHSVAIT---ENGELYGWGWGRYGNLGLGDRNDRCIP---EKVSVDCDKMVLV 228

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G  H   V   G + T+GW +YG LGHG+ +   VP  +QA +D     V+ G   T 
Sbjct: 229 ACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTM 288

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G +Y +G  +    G   + D       NV     V      +++V QIS     
Sbjct: 289 ALTTGGQLYGWGWNK---FGQVGVGD-------NVDRCSPVQVKFPHDQKVAQISCG--- 335

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGI 364
            W  HT A+TE   +Y++G G  GQLGI
Sbjct: 336 -WR-HTIAVTEKDNVYSWGRGTNGQLGI 361



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 26/229 (11%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ I+AG  + +AL    SG  V S G G  G+LGHG   D   P    Q   L+ Q +V
Sbjct: 17  VLLISAGGSHSVALI---SGNVVCSWGRGEDGQLGHGDTDDRLLP---TQLSALDAQQIV 70

Query: 216 -VAAGAWHAAVVGQDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V  GA H     +    V +WGWG +G LGHGN     +P+ ++AL  ++   +A GD 
Sbjct: 71  SVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDS 130

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
               V+ +G+V S+G  ++  LG     D         L PQ + + + V  ++V     
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGTTEDS--------LVPQKIQTFQGVPIKMVAAGA- 181

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
                  H+ A+TE+G+LY +G G  G LG+    ++ +R  PE+V +D
Sbjct: 182 ------EHSVAITENGELYGWGWGRYGNLGL---GDRNDRCIPEKVSVD 221



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 11/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ QG+ I   AAGA  ++ I++ G++Y +G   +G    G
Sbjct: 148 QNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLG 207

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  + +     V+  K + V   A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 208 DRNDRCIPEKVSVDCDKMVLV---ACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHL 264

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L    + + + Q++ G+ + +AL    +G  +Y  G    G++G G   D   P  
Sbjct: 265 VPHKLQAFSDKL-ICQVSGGWRHTMALT---TGGQLYGWGWNKFGQVGVGDNVDRCSPV- 319

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +  + Q V   +  W H   V +   V +WG G  G LG G+    + PK+++AL+
Sbjct: 320 --QVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALS 377


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 35/348 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+  ++    AG+  ++ I D G+++ +G +  G   +  + TK    P  V++L N+ 
Sbjct: 34  ALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAE-TKTENIPSQVKALNNVN 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-------ENIP 155
           +VQAAIG +    +  +GR Y +      + G   E  D     L   +         + 
Sbjct: 93  IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV 152

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+AAG  + + L  +     V++     G     G       P  ++  + + L    
Sbjct: 153 VRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDIKQISVPVRVQGLEKVKL---- 201

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A GA+H   + +DG +  WG   YG LG G+ +  S P  VQ L+ +  + +A G + +
Sbjct: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++DG+VY +G GE   LG         N  ++ + PQ V  L    E +VQ+S   +
Sbjct: 262 TALTDDGEVYGWGRGEHGRLGFGD------NDKSSKMVPQKVNLL--AGEDIVQLSCGGT 313

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
                H+ ALT+ G++++FG GD G+LG      +   G P  V  D+
Sbjct: 314 -----HSVALTQDGRMFSFGRGDHGRLGY---GKKVTTGQPVEVPTDI 353



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 26/271 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--------EYGVQGTKLV 89
           P   ++L  + I+QAA G    + + D G+ YA+G + +G+         + G    + +
Sbjct: 82  PSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDI 141

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             PQ       + V Q A G   + VL+REG V+T+        G    P D++   +  
Sbjct: 142 VIPQ--RCAPKLVVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPV 191

Query: 150 TLENIPVVQ-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            ++ +  V+ IA G  + LAL  Q  G  +++ G    G+LG G       P  ++    
Sbjct: 192 RVQGLEKVKLIAVGAFHNLAL--QEDG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSG 248

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 266
           L L  V +AAG WH+  +  DG V  WG G +G LG G+ +  S  VP+ V  L     +
Sbjct: 249 LTL--VDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 306

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            ++ G   +  +++DG ++SFG G+   LG+
Sbjct: 307 QLSCGGTHSVALTQDGRMFSFGRGDHGRLGY 337



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 42/227 (18%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           ++ + G G  G+LG G   +++   ++   +   ++ VV  AG+ ++  +  DG++ TWG
Sbjct: 6   SLIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVV--AGSRNSLAICDDGKLFTWG 63

Query: 237 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG------C 289
           W + G LGH  E + E++P  V+ALN+V  +  A G +    V + G  Y++G      C
Sbjct: 64  WNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123

Query: 290 GESA----SLGHNAIAD----------------GQGNRHANVLT----------PQLVTS 319
           GE        G     D                  G  H+ VLT          P     
Sbjct: 124 GEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGD 183

Query: 320 LKQVN--ERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
           +KQ++   RV  +     I   A H  AL E G L+A+G  + GQLG
Sbjct: 184 IKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLG 230



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L G+ ++  AAG   +  ++D G+VY +G+   G   +G         PQ V  
Sbjct: 240 PIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 299

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE---------PNDVEPHPLL 148
           L    +VQ + G   +  L+++GR+++F  G+  RLG+  +         P D+ P   L
Sbjct: 300 LAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSL 359

Query: 149 GTLENIPVVQIAAGYCYLLALAC 171
              E       A G+     +AC
Sbjct: 360 SGTEE------AEGHWIAKLVAC 376



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 17/148 (11%)

Query: 235 WGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           WG G  G LG G NEE E V  VV AL   K   V  G   +  + +DG ++++G  +  
Sbjct: 10  WGAGEDGQLGIGINEEKEWV-CVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRG 68

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
           +LGH A       +  N+  P  V +L  VN  +VQ ++     W  H  A+ + G+ YA
Sbjct: 69  TLGHPAE-----TKTENI--PSQVKALNNVN--IVQAAIGG---W--HCLAVDDQGRAYA 114

Query: 354 FGAGDKGQLGIELVNNQTERGNPERVDI 381
           +G  + GQ G E    + + G   R DI
Sbjct: 115 WGGNEYGQCG-EEPERKDDTGKTLRRDI 141


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 160/347 (46%), Gaps = 31/347 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L G RI+  AAG   T  IS  G VY +G   +G+  +     + +  P+LVE+
Sbjct: 82  PFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENL--PRLVEA 139

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK   +V+ +IG    A + ++G +Y   WG  A  G     +   P  + G LE   V+
Sbjct: 140 LKGKNIVKVSIGGNHMAAIDKDGHLYC--WGRAASAGSGGTEHVFIPRLIKGDLEKEKVI 197

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            ++ G  +  A+  +     V++ G G  G+LGHG +  +  P+   + Q L  + V VA
Sbjct: 198 SVSCGRSHTAAVTEKGE---VWTWGNGYEGELGHGEKNSQYQPK---KVQSLTEKVVDVA 251

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATGDYT 274
            G      V + G + + G   YG LG G    E     P+ +        + ++ GDY 
Sbjct: 252 CGRDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYH 310

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
              +  DG VY++G G    LGH   AD       ++  P  V +L+  N  +VQ++   
Sbjct: 311 VCALGRDGLVYTWGLGREGQLGHGEKAD------CSLAKP--VDNLR--NFEIVQVACG- 359

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
                 HT A+T+ G LY +G G  GQLG   EL +  + R +P +V
Sbjct: 360 ----GGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQV 402



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 21/213 (9%)

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           +  A   +G  + + G  L G+LG G       P  +E   L   + V VAAG    A +
Sbjct: 49  MKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEA--LSGKRIVYVAAGDSCTAAI 106

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG V TWG G YG LGH ++  E++P++V+AL     + V+ G      + +DG +Y 
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYC 166

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G   SA  G        G  H  V  P+L+    +  E+V+ +S   S     HT A+T
Sbjct: 167 WGRAASAGSG--------GTEH--VFIPRLIKGDLE-KEKVISVSCGRS-----HTAAVT 210

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           E G+++ +G G +G+LG    N+Q +   P++V
Sbjct: 211 EKGEVWTWGNGYEGELGHGEKNSQYQ---PKKV 240


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 150/326 (46%), Gaps = 39/326 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     +++  G+V+ +G++S G   +GV   K V  P+LVESL    V   A G F 
Sbjct: 286 ACGFRHAAMVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVESLAMTTVDFIACGEFH 343

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH T+ +   P  + G LE +   Q+A+  C    
Sbjct: 344 TCAVTMAGEIYT--WGDGMHYAGLLGHGTDISHWIPKRISGPLEGL---QVASVTCGPWH 398

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG+R +  +P+ +E   L  L+ + VA G WH A V +
Sbjct: 399 TALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVES--LAGLRTIAVACGVWHTAAVVE 456

Query: 229 -----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
                       G++ TWG G    LGHG++E    P  V AL D     +A G   T  
Sbjct: 457 VIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVG 516

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           ++  G V++ G      LG N  ADG+         P LV   K   E V +I+     Y
Sbjct: 517 LTTSGHVFTMGSTVYGQLG-NPYADGK--------VPCLVED-KLSGESVEEIAC--GAY 564

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
              H   LT   ++Y +G G  G+LG
Sbjct: 565 ---HVAVLTSRNEVYTWGKGANGRLG 587



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 138/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++R+G V+T+   +  RLGH    + ++P  L+ +L
Sbjct: 271 PRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPR-LVESL 329

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
               V  IA G  +  A+      MA  +Y+ G G+   G LGHG+      P+ I    
Sbjct: 330 AMTTVDFIACGEFHTCAVT-----MAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISG-P 383

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V  G WH A+V   G++ T+G G +G LGHGN E  + PK V++L  ++ I 
Sbjct: 384 LEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA 443

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  V E            G ++++G G+   LGH       G++    L P  
Sbjct: 444 VACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTC 495

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V +L   N    +I+  +S+     T  LT SG ++  G+   GQLG
Sbjct: 496 VPALIDFN--FHKIACGHSL-----TVGLTTSGHVFTMGSTVYGQLG 535



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T L++  GQ++ FG  +FG   +G +    +  P+ VESL  +  
Sbjct: 384 LEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNREN--IAYPKEVESLAGLRT 441

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALI 500

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V+++G  + G+LG+    D K P L+E  +L    
Sbjct: 501 DFNFHKIACGHSLTVGLTT--SGH-VFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGES 555

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 556 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACG 614


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 155/345 (44%), Gaps = 29/345 (8%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N R G+R    R+ +  P   +  +   I Q A G G T+++ + G +++FG + +G+  
Sbjct: 20  NYRLGRRGT--RDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYGQLG 77

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
            G +    + + + + SL N  +   A G + +A L   G V+T+  G + RLGH    N
Sbjct: 78  NGTKVDSPLDASRDISSLSNKLIA-VACGRYHSAALDVNGTVFTWGGGKNGRLGH----N 132

Query: 141 DVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           D +   +   + ++P   +I  GY    A+    +   +Y+ G G  G+LG GS  D   
Sbjct: 133 DEQTRTIPCRITHLPRAHKIFCGYHITAAI----TDDGLYTWGWGEHGQLGQGSLEDSYG 188

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQ 258
           P+ +  F   NL    +A G  H  V  + G V TWG   +G LG G   E  S P ++ 
Sbjct: 189 PKKV-IFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLT 247

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           +L  +    VA GD  +  V+  G ++++GCG     GH    D           P LV 
Sbjct: 248 SLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCD--------MPFLVE 299

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           SL       V + +      +  T AL++   +Y FG    GQLG
Sbjct: 300 SL-------VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG 337



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 21/247 (8%)

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           +YT+    + RLG     +D     L+   EN  + Q+A G  + L L        ++S 
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLL---EDGCLHSF 68

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G    G+LG+G++ D       +   L N + + VA G +H+A +  +G V TWG G+ G
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGH +E+  ++P  +  L   +A  +  G + T  +++DG +Y++G GE   LG  ++ 
Sbjct: 128 RLGHNDEQTRTIPCRITHL--PRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLE 184

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           D  G +        L  S     +R              H    TESG +Y +G+ + GQ
Sbjct: 185 DSYGPKKVIFDDANLAISQLACGDR--------------HCLVRTESGDVYTWGSNEFGQ 230

Query: 362 LGIELVN 368
           LGI   N
Sbjct: 231 LGIGRYN 237



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E+  +P+   SL G+ +   AAG   +  +++ G ++ +G  + G+  +G         P
Sbjct: 238 EIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND--CDMP 295

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            LVESL  +F+++   G+ FT  LS++  +Y F   +  +LG  ++ +   P  L  ++ 
Sbjct: 296 FLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIP 355

Query: 153 NIPVVQIAAGYCYL 166
               +     +C L
Sbjct: 356 GTIDITCGHFHCTL 369


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 164/326 (50%), Gaps = 41/326 (12%)

Query: 40  YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
           Y R+      IQ     G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  
Sbjct: 351 YSRTCASPDSIQTG---GDAPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFS 405

Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLE 152
           +   ++A  G + T V+S +G V     G+  RLG     N         EPH    +++
Sbjct: 406 DAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIK 460

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            +   + + G+     LA    G  V+S G G  GKLGHG+ + +K+P+LI Q  L    
Sbjct: 461 KVSSSKGSDGH----TLAFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKV 514

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V V+AG  H+A V +DG + TWG G +G LGHG+    ++P +V+ +++V    V+ G 
Sbjct: 515 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGS 572

Query: 273 YTTFVVSEDG-DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
             T  +S+DG  V+SFG G++  LGH     G  NR   V  P+++ +L+ +  R V   
Sbjct: 573 SHTIALSKDGRTVWSFGGGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAG 624

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAG 357
             +S+       ALT +G++YA+G G
Sbjct: 625 SQSSL-------ALTSTGQVYAWGCG 643



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 412 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 471

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 472 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 529

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 530 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 584

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 585 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 643

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 644 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 688

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 689 YAWGNNSMGQCG 700



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 457 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 514

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 515 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 571

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 572 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 627

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 628 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 685

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  V  + +    ++S+ W A
Sbjct: 686 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 737



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4166 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4223

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P   +  LE   + ++
Sbjct: 4224 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPE-RVAALEGYQIGEV 4282

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + L ++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4283 ACGLNHTLVVSTD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACG 4338

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V AL+ V    +A G   T  +S
Sbjct: 4339 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALS 4398

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVTSL+  + R +     +S  W
Sbjct: 4399 ASGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTSLQGKSVRQISAGRCHSAAW 4449

Query: 339  NA 340
            ++
Sbjct: 4450 SS 4451



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 33/340 (9%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P +C++ Q I       G   T +I   G V A G+ S+G    G      V +  ++ 
Sbjct: 4114 SPSFCQAQQVI------CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VIS 4165

Query: 97   SLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            +L+   V Q       +  +  L+  G V+++  G+  +LGH        P  +   L+ 
Sbjct: 4166 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQG 4224

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              VVQ++ G+ +    A   +   +++ G G  G+LG G+ +++K P  +   +    Q 
Sbjct: 4225 EEVVQMSCGFKHS---AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALE--GYQI 4279

Query: 214  VVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              VA G  H  VV  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G 
Sbjct: 4280 GEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGT 4339

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  +++DG VY+FG  +   +G   + +G+   H     PQ V +L  V    + +  
Sbjct: 4340 QFSVALTKDGHVYTFG--QDRLIG---LPEGRARNHNR---PQQVPALSGVFVEDIAVG- 4390

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                    HT AL+ SG +YA+G+  +GQLG+   N+  E
Sbjct: 4391 ------AEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 26/207 (12%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4140 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4200 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4257

Query: 298  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKL-YAF 354
                 G GN  +N   P+ V +L+  Q+ E    ++         HT  ++  G + +AF
Sbjct: 4258 -----GLGNT-SNKKLPERVAALEGYQIGEVACGLN---------HTLVVSTDGSMVWAF 4302

Query: 355  GAGDKGQLGIELVNNQTERGNPERVDI 381
            G GD G+LG+    N T + +P++VDI
Sbjct: 4303 GDGDYGKLGL---GNSTAKSSPQKVDI 4326



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 510 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 565

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 566 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 624

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 625 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 677

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 678 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 728



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4308 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4367

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V +L  +FV   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 4368 RNH--NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVY--AWGSNSEGQLGLGHT---N 4420

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+ +L+   V QI+AG C+  A +  P
Sbjct: 4421 HVREPTLVTSLQGKSVRQISAGRCHSAAWSSPP 4453



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 20/144 (13%)

Query: 221  WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            WH   +G    V  WG GR+G L        S P    + +  +A  V  G   TFV+  
Sbjct: 4082 WH---LGGKCDVFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVIQA 4135

Query: 281  DGDVYSFGCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            +G V + G G    L       GQGN    +VLT  ++++L+      V   L  S   +
Sbjct: 4136 NGTVLACGEGSYGRL-------GQGNSDDLHVLT--VISALQG----FVVTQLVTSCGSD 4182

Query: 340  AHTFALTESGKLYAFGAGDKGQLG 363
             H+ ALTESG+++++G GD G+LG
Sbjct: 4183 GHSMALTESGEVFSWGDGDYGKLG 4206



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 607 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 660

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 661 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 716

Query: 151 LENIPVVQIAAGYCYLLALACQP 173
           L+ + + QI+AG  + LA    P
Sbjct: 717 LDGVAIQQISAGTSHSLAWTALP 739


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 152/332 (45%), Gaps = 39/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + ++Q A G     L++  G+++ +G++S G   +GV   K V  P LVE+L +  V   
Sbjct: 342 LDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGV--GKNVVQPCLVEALASSTVDFV 399

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH T+ +   P  + G LE +   Q+A  
Sbjct: 400 ACGEFHTCAVTMAGEIYT--WGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL---QVAFV 454

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
            C     A   S   +++ G G  G LGHG R +  +PR +E   L  L+ V VA G WH
Sbjct: 455 TCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVES--LSGLRTVSVACGVWH 512

Query: 223 AAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A + +            G++ TWG G    LGHG+++    P  + AL D     +A G
Sbjct: 513 TAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACG 572

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V++ G      LG N  +DG+         P LV   K   E V +I+
Sbjct: 573 HSLTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KLAGECVEEIA 622

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                Y   H   LT   ++Y +G G  G+LG
Sbjct: 623 C--GAY---HVTVLTSRNEVYTWGKGANGRLG 649



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V+Q A G    A+++R+G ++T+   +  RLGH    N V+P  L+  L
Sbjct: 333 PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQP-CLVEAL 391

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            +  V  +A G  +  A+      MA  +Y+ G G    G LGHG+      P+ I    
Sbjct: 392 ASSTVDFVACGEFHTCAVT-----MAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-P 445

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V  G WH A++   G++ T+G G +G LGHG+ E  S P+ V++L+ ++ + 
Sbjct: 446 LEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVS 505

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 506 VACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGH-------GDKDAR-LEPTC 557

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +++L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 558 ISALIDYN--FHRIACGHSL-----TVGLTTSGRVFTMGSTVYGQLG 597



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T LI+  GQ++ FG  +FG   +G +    ++ P+ VESL  +  
Sbjct: 446 LEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDREN--ISYPREVESLSGLRT 503

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           V  A G + TA +              G+++T+  G+  RLGH  +   +EP   +  L 
Sbjct: 504 VSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEP-TCISALI 562

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V+++G  + G+LG+  ++D K P L+E  +L    
Sbjct: 563 DYNFHRIACGHSLTVGLTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGEC 617

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +A GA+H  V+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 618 VEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACG 676


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  +  +   ++A  G + T V+
Sbjct: 373 GEAPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAATFADAQTIEA--GQYCTFVI 428

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH     ++ +   + + G+     L
Sbjct: 429 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RAIKKVSSSKGSDGH----TL 481

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 482 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVSED 539

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 540 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 597

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 598 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 642

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 643 GQVYAWGCG 651



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  + I  V ++ G +  
Sbjct: 420 AGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGH 479

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A++  
Sbjct: 480 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS-- 537

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 538 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 592

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 593 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 651

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     RVV IS+ +S     H  AL+   ++
Sbjct: 652 -ACLGC-------GSSEATALRPKLIEEL--ATTRVVDISIGDS-----HCLALSHDNEV 696

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 697 YAWGNNSMGQCG 708



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 465 RAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 522

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A +S +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 523 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 579

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 580 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 635

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 636 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD 693

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V  L  V  + +    ++S+ W A
Sbjct: 694 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTA 745



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +S+ G++Y +G+  FG   +G   ++ +  P LV+ + N+  
Sbjct: 518 LQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNVGE 575

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V  + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 576 V--SCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 632

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE  +L   + V ++ G  
Sbjct: 633 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIE--ELATTRVVDISIGDS 685

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ V    ++ G
Sbjct: 686 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 615 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 668

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    VV  +IG+     LS +  VY  +WGN++      G+ T P   +P  ++G 
Sbjct: 669 IEELATTRVVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVVG- 724

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ + + QI+AG  + LA    P    V
Sbjct: 725 LDGVAIQQISAGTSHSLAWTALPRDRQV 752


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 38/325 (11%)

Query: 58  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           RTML         +G  S G+         +V  PQ+   + +  V + A G   +  L 
Sbjct: 3   RTML--------CWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL 54

Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
            +G VYT       +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     
Sbjct: 55  EDGEVYTCGLNTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ--- 108

Query: 178 VYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
           ++S G G  G+LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TW
Sbjct: 109 LFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTW 165

Query: 236 GWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           G   +G LG G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  
Sbjct: 166 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ 225

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG +   D +   H  +L  Q          +VV IS         HT  LT+SG ++ F
Sbjct: 226 LGLSDEKDRESPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTF 270

Query: 355 GAGDKGQLGIELVNNQTERGNPERV 379
           GAG  GQLG + +N++    NP RV
Sbjct: 271 GAGSCGQLGHDSMNDEV---NPRRV 292



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 29  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 84

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 85  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 144

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 145 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 199

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 200 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 259

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 260 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 308

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 309 ----HTLAFVPSSGLIYAFGCGARGQLG 332



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 70  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 127

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 128 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 187

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 188 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 240

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 241 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 300

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 301 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 332



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 175 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 232

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 233 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 292

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 293 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 348


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 159/356 (44%), Gaps = 41/356 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   S   + +   A G     +I+  G+VY++G +S G    G Q    V+ P++V+S
Sbjct: 255 PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGR--IGNQVNIKVSRPKVVQS 312

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENIP 155
           L ++ V   A G+  T  ++  G +    WG    +G       N   PH L   L+ I 
Sbjct: 313 LASLHVKDVAYGSKHTCAVTVSGEL--IEWGEGPYMGQLDSYARNQWFPHKLFSPLDGIS 370

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV+IA G  +   +    S   +Y+ G G  G LGHG       P+ +E  +   ++   
Sbjct: 371 VVKIACGPWHTAIIT---SSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVK--C 425

Query: 216 VAAGAWHAAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           VA G WH A + +            ++ TWG    G LGH +++ + +P  V +L D   
Sbjct: 426 VACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDF 485

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           I V+ G   T  +S  G V++ G      L         GN HA+  T   V  L + +E
Sbjct: 486 IQVSCGTALTVALSVTGVVFTSGSSMHGQL---------GNPHADGKTVSAVEGLLK-SE 535

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-ELVNNQTERGNPERVD 380
            V  IS  +S     H   +T +GK++ +G G +GQLG+ + +N    R  P  VD
Sbjct: 536 FVRHISSGSS-----HVAVVTTNGKVFTWGKGKEGQLGLGDFLN----RSTPTLVD 582



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 22/229 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIF 102
           L GI +++ A G   T +I+ +GQ+Y +G  +FG   +G  QGT   T P+ VESLK   
Sbjct: 366 LDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGT---TRPKEVESLKGSR 422

Query: 103 VVQAAIGNFFTAVL--------SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE 152
           V   A G + TA +        S   R   F+WG+  R  LGH  +   + P   + +L 
Sbjct: 423 VKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIP-TCVDSLT 481

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +   +Q++ G    +AL+   +G+ V++ G  + G+LG+    D K    +E   LL  +
Sbjct: 482 DYDFIQVSCGTALTVALSV--TGV-VFTSGSSMHGQLGN-PHADGKTVSAVEG--LLKSE 535

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            V  +++G+ H AVV  +G+V TWG G+ G LG G+    S P +V AL
Sbjct: 536 FVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDAL 584



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 38/306 (12%)

Query: 71  FGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
           F  D+FG   E G     L   P LV+S   + V   A G    A+++++G VY  SWGN
Sbjct: 236 FWGDAFGSILECGDTSKPL---PMLVDSTNMLDVQSIACGETHAAIITKQGEVY--SWGN 290

Query: 130 DA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
           ++  R+G+        P  ++ +L ++ V  +A G  +  A+    SG  +        G
Sbjct: 291 ESSGRIGNQVNIKVSRP-KVVQSLASLHVKDVAYGSKHTCAVTV--SGELIEWGEGPYMG 347

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +L   +R      +L      +++  V +A G WH A++   G++ T+G G +G LGHG+
Sbjct: 348 QLDSYARNQWFPHKLFSPLDGISV--VKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD 405

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGH 297
            +  + PK V++L   +   VA G + T  + E             ++++G  +   LGH
Sbjct: 406 TQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGH 465

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
              AD +       L P  V SL   +   +Q+S   ++     T AL+ +G ++  G+ 
Sbjct: 466 ---ADKKMK-----LIPTCVDSLTDYD--FIQVSCGTAL-----TVALSVTGVVFTSGSS 510

Query: 358 DKGQLG 363
             GQLG
Sbjct: 511 MHGQLG 516


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 163/352 (46%), Gaps = 32/352 (9%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G+E   TP Y       +  Q  AG   T LI   G V A GK S+G    G      V 
Sbjct: 414 GQEKITTPKYSAVFTDCQ--QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVP 471

Query: 91  SPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              L +   +K I   + + G+  +  L+  G VY++  G+  +LGH T      P  + 
Sbjct: 472 KKPLFDKKYVKKISSSKGSDGH--SLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVK 529

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           G L    V  ++AGY +  A+        +Y+ G G  G+LGH   + +  P  ++  + 
Sbjct: 530 GPLVGKVVKCVSAGYRHSAAVT---EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES 586

Query: 209 LNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           + L    VA G  H   V QDG+ + ++G G  G LGHG+   +  PKV++ALN +    
Sbjct: 587 VGL----VACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRK 642

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           VA G  ++  V+  G +Y++GCG        AI  G G+     L P+LV  L+  ++R+
Sbjct: 643 VACGSQSSLAVTSSGQLYAWGCG--------AIL-GCGSAEYTALRPRLVEDLQ--SKRM 691

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           V I+  +S     H  ALT   ++YA+G    GQ G     +   R  P+RV
Sbjct: 692 VDIACGDS-----HVIALTHESEVYAWGNNAMGQCGQGHAQSPITR--PKRV 736



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 153/311 (49%), Gaps = 25/311 (8%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           V   PL+ +    ++ I ++ G+ G ++ ++  G+VY++G   +G+  +G   T+ +  P
Sbjct: 470 VPKKPLFDKKY--VKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKI--P 525

Query: 93  QLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           +LV+  L    V   + G   +A ++ +G +YT+  G   RLGH    +   P  +  ++
Sbjct: 526 KLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKV-QSI 584

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E++ +V     +     LA    G  ++S G G  GKLGHG    +  P++IE    L +
Sbjct: 585 ESVGLVACGGSH----TLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYI 640

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVAT 270
           + V  A G+  +  V   G++  WG G    LG G+ E  ++ P++V+ L   + + +A 
Sbjct: 641 RKV--ACGSQSSLAVTSSGQLYAWGCG--AILGCGSAEYTALRPRLVEDLQSKRMVDIAC 696

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQ 329
           GD     ++ + +VY++G        +NA+   GQG+  + +  P+ V  L  V+   V 
Sbjct: 697 GDSHVIALTHESEVYAWG--------NNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVS 748

Query: 330 ISLTNSIYWNA 340
              ++S+ W A
Sbjct: 749 AGTSHSVAWTA 759



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           +A + G  G V  WG      L  G +E  + PK      D +   V  G + TF++  D
Sbjct: 389 NANLSGSCGEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQ--QVEAGQFCTFLIYSD 446

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V + G G    LG      G  N   N   P+     K + ++     +++S   + H
Sbjct: 447 GTVGACGKGSYGRLGL-----GDSN---NCSVPK-----KPLFDKKYVKKISSSKGSDGH 493

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           + ALT +G++Y++G GD G+LG
Sbjct: 494 SLALTTTGEVYSWGDGDYGKLG 515


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 156/331 (47%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q + G+    L +  G+V+ +G++  G   +G    + ++ P+LVESL    V   
Sbjct: 254 LDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTD--EDISRPKLVESLAVSNVEYI 311

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +Y  +WG    N   LGH    +   P  + G LE + V+ +A G
Sbjct: 312 ACGEFHTCAVTASGDLY--NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACG 369

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +  ALA   S   V++ G G  G LGHG+R +  +P+ +E   L   + + VA G WH
Sbjct: 370 -SWHSALAM--SSGKVFTFGDGTFGALGHGNRENVAYPKEVES--LSGFRTMKVACGVWH 424

Query: 223 AAVV----GQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A +     Q G      ++ TWG G    LGHG++E   VP VVQAL D     VA G 
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGY 484

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G      LG N  ADG+         P  V   K  +E V +IS 
Sbjct: 485 SMTIALATSGHVFTMGSSNYGQLG-NPKADGK--------QPCQVQD-KLSSELVEEISC 534

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + H   LT   ++Y +G G  G+LG
Sbjct: 535 G-----SYHVAVLTSRSEVYTWGMGANGRLG 560



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 164/343 (47%), Gaps = 47/343 (13%)

Query: 62  ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           I   G VY +G+       S G +      T ++  P+ +ES   + V Q + G+   A+
Sbjct: 210 IESLGDVYVWGEVWTDVIPSEGSSNLVCSKTDVLI-PKPLESDVVLDVQQISCGSRHIAL 268

Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            +R+G V+T  WG +   RLGH T+  D+    L+ +L    V  IA G  +  A+    
Sbjct: 269 TTRQGEVFT--WGEELGGRLGHGTD-EDISRPKLVESLAVSNVEYIACGEFHTCAVTA-- 323

Query: 174 SGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y+ G G    G LGHG       P+ +    L  LQ + VA G+WH+A+    G+
Sbjct: 324 SG-DLYNWGDGSYNAGLLGHGIGASHWLPKRVSG-PLEGLQVLSVACGSWHSALAMSSGK 381

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------D 281
           V T+G G +G LGHGN E  + PK V++L+  + + VA G + +  + E           
Sbjct: 382 VFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVS 441

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
             ++++G G+   LGH       G++ A  L P +V +L  V+    Q++   S+     
Sbjct: 442 RKLFTWGDGDKNRLGH-------GDKEAR-LVPTVVQAL--VDNNFHQVACGYSM----- 486

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           T AL  SG ++  G+ + GQLG    N + +   P +V   LS
Sbjct: 487 TIALATSGHVFTMGSSNYGQLG----NPKADGKQPCQVQDKLS 525



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + L   +G+V+ FG  +FG   +G +    V  P+ VESL     
Sbjct: 358 LEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNREN--VAYPKEVESLSGFRT 415

Query: 104 VQAAIGNFFTAVL----SREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +    S+ G      +++T+  G+  RLGH  +   + P  +   ++N
Sbjct: 416 MKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDN 475

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A GY   +ALA   +   V+++G    G+LG+  + D K P  + Q +L +   
Sbjct: 476 -NFHQVACGYSMTIALA---TSGHVFTMGSSNYGQLGN-PKADGKQPCQV-QDKLSSELV 529

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ G++H AV+     V TWG G  G LGHG  E +  P +V AL D     +A G +
Sbjct: 530 EEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSN 589

Query: 273 YTTFV 277
           +TT +
Sbjct: 590 FTTCI 594


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 149/315 (47%), Gaps = 36/315 (11%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRS---------LQGIRIIQAAAGAGRTMLISDAGQVY 69
           I+  ++GK    G    G   +CRS         L+   I Q A GA  T+  ++ G+V+
Sbjct: 47  ILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGLEAHNITQVACGAQHTLAQNEWGEVF 106

Query: 70  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
           A+G +S G+    V+ + ++ +P++V+SL    VVQ A G   +  L+  G +Y   WG+
Sbjct: 107 AWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIY--CWGS 163

Query: 130 DAR----LGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           ++     LG    P   E  P L+  L+ IP+  I+ G  +  + A  PSG AVY  G  
Sbjct: 164 NSHGQLGLGSSGTP---ETKPCLVKLLQGIPISHISCGADF--SFAVTPSG-AVYGWGKN 217

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
             G+LG G  TD   P    Q + L  Q V  +  G  H A + +DG V T+G G YG L
Sbjct: 218 SFGQLGLGDTTDRPQP---TQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQL 274

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           GH     E +P+ V  L       +  G  +T   V   G +Y+FG G S  LG  +   
Sbjct: 275 GHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKST-- 332

Query: 303 GQGNRHANVLTPQLV 317
                 ANV +PQLV
Sbjct: 333 ------ANVNSPQLV 341



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 30/325 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+Q   G   T+L+   G++++FG + +G+  +    T+     + V+ L+   + Q A 
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTR----AEPVDGLEAHNITQVAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G   T   +  G V  F+WG+++  +LG + E + +    ++ +L    VVQIA G  + 
Sbjct: 92  GAQHTLAQNEWGEV--FAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHS 149

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
           +AL    +   +Y  G    G+LG GS  T E  P L++  Q + +  +  + GA  +  
Sbjct: 150 MALT---NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHI--SCGADFSFA 204

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V   G V  WG   +G LG G+      P  +++L   +  ++  G   T  ++ DG V+
Sbjct: 205 VTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVF 264

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +FG G    LGH           AN + P+ V  L  +   V QI          HT A 
Sbjct: 265 TFGAGMYGQLGHCT--------SANEMLPRKVLEL--MGTTVTQICCG-----RCHTLAF 309

Query: 346 TES-GKLYAFGAGDKGQLGIELVNN 369
             S G++YAFG G  GQLG +   N
Sbjct: 310 VPSKGRIYAFGLGGSGQLGTKSTAN 334



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 26/274 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +SL   +++Q A G   +M +++ G++Y +G +S G+   G  GT   T P LV+
Sbjct: 127 TPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTP-ETKPCLVK 185

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPL-LGTL 151
            L+ I +   + G  F+  ++  G VY   WG ++     LG  T+     P P  L +L
Sbjct: 186 LLQGIPISHISCGADFSFAVTPSGAVY--GWGKNSFGQLGLGDTTD----RPQPTQLKSL 239

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               V  I  G  +  AL        V++ G G+ G+LGH +  +E  PR +   +L+  
Sbjct: 240 RFQRVTYIRCGMDHTAALT---RDGGVFTFGAGMYGQLGHCTSANEMLPRKV--LELMGT 294

Query: 212 QPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--------QALND 262
               +  G  H  A V   GR+  +G G  G LG  +    + P++V         ++ D
Sbjct: 295 TVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKD 354

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
           VK +   T +  + + S+   V +  CG   S  
Sbjct: 355 VKDLATETAEALSAIQSKRVVVRNIFCGGDQSFS 388


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P++  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKMALSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P++V +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVVEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 144/312 (46%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++    +      V+ G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKVV+AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S        AL    ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDSX-----CLALRHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 153/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P+++E  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +  D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4192 ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4247

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4307

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4308 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4358

Query: 339  NA 340
             A
Sbjct: 4359 TA 4360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKVDV 4235



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4307

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4308 STGDVYAWGSNSEGQLGLGHTNHVRE 4333



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
               +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 XCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4184

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4185 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4244

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4245 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4296

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4297 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4351

Query: 220  AWHAA 224
              H+A
Sbjct: 4352 RCHSA 4356



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     L  +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSXCLALRHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4277 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4329

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4330 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4362


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 126/269 (46%), Gaps = 31/269 (11%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF----- 102
            R++Q A G   T LI+D   +Y FG    G   +G +     T P  V    ++      
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEED--CTDPIPVGYFTSLIAAEGV 1302

Query: 103  ----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
                VV  + G   T V++  G +Y F WG   RLG  T       +P    L NI  V 
Sbjct: 1303 EFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLG--TGETGSSLYPSRVDLRNIAAV- 1359

Query: 159  IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
             A G  + LAL    S   V++ G G GG+LG+GS TDE+ P L+E  +  ++  V +AA
Sbjct: 1360 -ACGREHTLALT---SKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSI--VAIAA 1413

Query: 219  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA----------LNDVKAI-H 267
            G  H+  + +DG V TWG+G  G LGHG  +   +P +V            ++D+  +  
Sbjct: 1414 GECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTS 1473

Query: 268  VATGDYTTFVVSEDGDVYSFGCGESASLG 296
            VA G Y T   + DG +Y +G   +  LG
Sbjct: 1474 VACGSYHTLAATNDGVLYGWGDAAAGQLG 1502



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 28/280 (10%)

Query: 103  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-----LGTLENIP-- 155
            VVQ A G   TA+++ +  +YTF  G   RLGH TE +  +P P+     L   E +   
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 156  -VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             VV ++ G  + + +        +Y  G G  G+LG G      +P  ++   L N+   
Sbjct: 1306 GVVDVSCGREHTMVVT---GNGDLYGFGWGEAGRLGTGETGSSLYPSRVD---LRNI--A 1357

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             VA G  H   +   GRV  +G G  G LG+G+E  E +P +V+ L +   + +A G+  
Sbjct: 1358 AVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECH 1417

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVVQIS 331
            +  +S DG+V ++G G S +LGH       G R  N L P LV    +   V   +  IS
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGH-------GTRD-NCLIPTLVDGPWTNPNVETLIHDIS 1469

Query: 332  LTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            +  S+   + HT A T  G LY +G    GQLG E ++ Q
Sbjct: 1470 VVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQ 1509



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 21/226 (9%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            G+   LG    G+ LY   +    I   A G   T+ ++  G+V+AFG    G    G +
Sbjct: 1332 GEAGRLGTGETGSSLYPSRVDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSE 1391

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
              + +  P LVE L+   +V  A G   +  LSR+G V T+ +G+   LGH T  N + P
Sbjct: 1392 TDEEL--PFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIP 1449

Query: 145  HPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLG--HGSRT 195
              + G   N  V  +      + ++AC         +   +Y  G    G+LG  H S  
Sbjct: 1450 TLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQ 1509

Query: 196  D-----EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            D      K  RL     +       +A G + +AV    G++  WG
Sbjct: 1510 DLVVLSPKEIRLPTSSGIRG-----IACGTFTSAVCSTQGQLFMWG 1550



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
            + + +A G   T ++++D  +Y+FG GE   LGH    D          T  L+ +    
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFT-SLIAAEGVE 1303

Query: 324  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
               VV +S         HT  +T +G LY FG G+ G+LG     +      P RVD+
Sbjct: 1304 FGGVVDVSCGRE-----HTMVVTGNGDLYGFGWGEAGRLGTGETGSSL---YPSRVDL 1353


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 148/328 (45%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L+S  G++Y++G++S G   +GV     V  P+L+++L ++ +   A G + 
Sbjct: 319 SCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDALTHMNIELVACGEYH 376

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  L G LE I V  I+ G  + + 
Sbjct: 377 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHTVI 434

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     P+ +E   L  L+ V  A G WH A V +
Sbjct: 435 VT---SAGQLFTFGDGSFGVLGHGDRESLSVPKEVE--SLKGLRTVRAACGVWHTAAVVE 489

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E   VP  V AL +     VA G   T 
Sbjct: 490 VMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTV 549

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ + P  V       E  +  +    I
Sbjct: 550 ALTTSGHVYTMG---------SAVYGQLGNPQADGMLPARV-------EGKLHKNFVEEI 593

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 594 SCGAYHVAVLTSRTEVYTWGKGANGRLG 621



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T++++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 417 LEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRES--LSVPKEVESLKGLRT 474

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  + + + P   +  L
Sbjct: 475 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVP-TCVAAL 533

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 534 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNF 589

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHGN + ++ P +V+AL D +  +V  G
Sbjct: 590 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCG 648

Query: 272 DYTTFVV 278
              T  +
Sbjct: 649 TNFTAAI 655



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A++S++G +Y  SWG ++  RLGH  + +   P  L+ 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIY--SWGEESGGRLGHGVDCDVAHPK-LID 360

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 361 ALTHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDISHWVPKKLHG-PLE 418

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G +H  +V   G++ T+G G +G LGHG+ E  SVPK V++L  ++ +  A
Sbjct: 419 GIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAA 478

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ +  L P  V
Sbjct: 479 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKESR-LVPTCV 530

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 531 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGMLPA 579

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 580 RVEGKL 585


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 52/333 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L+++L N+ +   A G + 
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDALANMNIELVACGEYH 373

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN       LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 374 TCAVTLSGDLYT--WGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAI 431

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 432 VT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 486

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     +A G   T 
Sbjct: 487 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 546

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLVTSLKQVNERVVQI 330
            ++  G VY+ G      LG N  ADG      +G  H N                V +I
Sbjct: 547 ALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF---------------VEEI 590

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S         H   LT   ++Y +G G  G+LG
Sbjct: 591 SCG-----AYHVAVLTSRTEVYTWGKGANGRLG 618



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 414 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRT 471

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAAL 530

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 QIA G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 531 VEPNFCQIACGHCMTVALT---TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF 586

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 587 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 577 RVEGKL 582


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 52/333 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L+++L N+ +   A G + 
Sbjct: 362 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDALANMNIELVACGEYH 419

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN       LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 420 TCAVTLSGDLYT--WGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAI 477

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E  +   L+ V  A G WH A V +
Sbjct: 478 VT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVRAACGVWHTAAVVE 532

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     +A G   T 
Sbjct: 533 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 592

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLVTSLKQVNERVVQI 330
            ++  G VY+ G      LG N  ADG      +G  H N                V +I
Sbjct: 593 ALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF---------------VEEI 636

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S     Y   H   LT   ++Y +G G  G+LG
Sbjct: 637 SC--GAY---HVAVLTSRTEVYTWGKGANGRLG 664



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 460 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRT 517

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P  +   +
Sbjct: 518 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALV 577

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     QIA G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 578 EP-NFCQIACGHCMTVALT---TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF 632

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 633 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 691



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 403

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 404 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 461

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 521

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 522 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 573

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 574 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 622

Query: 378 RVD 380
           RV+
Sbjct: 623 RVE 625


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 147/333 (44%), Gaps = 52/333 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L+++L N+ +   A G + 
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDALANMNIELVACGEYH 373

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN       LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 374 TCAVTLSGDLYT--WGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAI 431

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 432 VT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 486

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     +A G   T 
Sbjct: 487 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 546

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLVTSLKQVNERVVQI 330
            ++  G VY+ G      LG N  ADG      +G  H N                V +I
Sbjct: 547 ALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF---------------VEEI 590

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S     Y   H   LT   ++Y +G G  G+LG
Sbjct: 591 SC--GAY---HVAVLTSRTEVYTWGKGANGRLG 618



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 414 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRT 471

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP-TCVAAL 530

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 QIA G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 531 VEPNFCQIACGHCMTVALT---TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF 586

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ +  S P +V+AL D +   V  G
Sbjct: 587 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCG 645



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 357

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 358 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 415

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 527

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 528 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 576

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 577 RVEGKL 582


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G KGQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGAKGQLG 328



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   +
Sbjct: 171 LGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGY 344


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 143/324 (44%), Gaps = 36/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+ +++G++S G   +GV     +  P+L+++L    +   A G F 
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVACGEFH 371

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +  ++  G +YT+  G+   LGH  E +   P  +   LE I V  IA G  +   +   
Sbjct: 372 SCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT-- 429

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---- 228
            S   +++ G G  G LGHG +     PR ++   L  L+ V  A G WH A V +    
Sbjct: 430 -SAGQLFTFGDGTFGVLGHGDKKSVFIPREVDS--LKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 229 --------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
                    G++ TWG G  G LGHGN+E + VP  V AL +     VA G   T  ++ 
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 546

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G VY+ G      LG         N HA+   P  V       E  +  S    I   A
Sbjct: 547 SGHVYTMGSPVYGQLG---------NSHADGKLPNRV-------EGKLHKSFVEEIACGA 590

Query: 341 -HTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 591 YHVAVLTSRTEVYTWGKGSNGRLG 614



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 40/303 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N  +P  L+ 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPK-LID 355

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F L 
Sbjct: 356 ALNTTNIELVACGEFHSCAVTL--SG-DLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLE 411

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+++   +P+ V +L  ++ +  A
Sbjct: 412 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAA 471

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       GN+    L P  V
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GNKEPK-LVPTCV 523

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N+  +   P 
Sbjct: 524 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NSHADGKLPN 572

Query: 378 RVD 380
           RV+
Sbjct: 573 RVE 575



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 410 LEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK--KSVFIPREVDSLKGLRT 467

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP-TCVAAL 526

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    SG  VY++G  + G+LG+ S  D K P  +E  +L   
Sbjct: 527 VEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGN-SHADGKLPNRVEG-KLHKS 581

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +A G
Sbjct: 582 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641

Query: 272 DYTTFVV 278
              T  V
Sbjct: 642 TNFTAAV 648



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 27/296 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V  P+ V  
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV--PKRVNF 408

Query: 98  L-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L + I V   A G + TAV++  G+++TF  G    LGH  + +   P  +  +L+ +  
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV-DSLKGLRT 467

Query: 157 VQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           V+ A G  +  A+     G           +++ G G  G+LGHG+    K P+L+    
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN----KEPKLVPTCV 523

Query: 208 LLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              ++P        H+  V     G V T G   YG LG+ + + +   +V   L+    
Sbjct: 524 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFV 583

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             +A G Y   V++   +VY++G G +  LGH  + D          +P LV SLK
Sbjct: 584 EEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRN--------SPTLVESLK 631



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           + D   P+ +E   +L++Q +  A G  HA +V + G   +WG    G LGHG +     
Sbjct: 293 KMDSLLPKALESTIVLDVQNI--ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ 350

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           PK++ ALN      VA G++ +  V+  GD+Y++G G+   LGH       GN  ++ + 
Sbjct: 351 PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGH-------GNEVSHWVP 403

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  K+VN  +  I +++      HT  +T +G+L+ FG G  G LG
Sbjct: 404 -------KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG 446


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 52/333 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L+++L N+ +   A G + 
Sbjct: 361 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDALANMNIELVACGEYH 418

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN       LGH  E +   P  + G LE I V  I+ G  +   
Sbjct: 419 TCAVTLSGDLYT--WGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAI 476

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E  +   L+ V  A G WH A V +
Sbjct: 477 VT---SAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLK--GLRTVRAACGVWHTAAVVE 531

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     +A G   T 
Sbjct: 532 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTV 591

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLVTSLKQVNERVVQI 330
            ++  G VY+ G      LG N  ADG      +G  H N                V +I
Sbjct: 592 ALTTSGHVYTMGSPVYGQLG-NPQADGMLPVRVEGKLHKNF---------------VEEI 635

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S     Y   H   LT   ++Y +G G  G+LG
Sbjct: 636 SC--GAY---HVAVLTSRTEVYTWGKGANGRLG 663



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 459 LEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQS--LSVPREVESLKGLRT 516

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 517 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT-CVAAL 575

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 QIA G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 576 VEPNFCQIACGHCMTVALT---TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF 631

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ GA+H AV+     V TWG G  G LGHG+ +  S P +V++L D +   V  G
Sbjct: 632 V-EEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCG 690



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIY--SWGEESGGRLGHGVDCDVPQPK-LID 402

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L N+ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 403 ALANMNIELVACGEYHTCAVTLS-GDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNG-PLE 460

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ +  A
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 520

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 521 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDTR-LVPTCV 572

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    QI+  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 573 AALVEPN--FCQIACGHCM-----TVALTTSGHVYTMGSPVYGQLG----NPQADGMLPV 621

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 622 RVEGKL 627


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 38/309 (12%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLASSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ + +V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G++  LGH     G  NR   V  P+++ +L+ +  R V     +S+       ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632

Query: 349 GKLYAFGAG 357
           G++YA+G G
Sbjct: 633 GQVYAWGCG 641



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T +IS  G V A GK S+G    G    +        E  ++I  V ++ G +  
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T   + EG V+++  G+  +LGH        P  + G L+   VV ++AGY +  A+   
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
                +Y+ G G  G+LGHG       P L++   ++N+  V  + G+ H   + +DGR 
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKD--IINVGEV--SCGSSHTIALSKDGRT 582

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++AL  +    V  G  ++  ++  G VY++GCG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  L P+L+  L     R+V IS+ +S     H  AL+   ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEV 686

Query: 352 YAFGAGDKGQLG 363
           YA+G    GQ G
Sbjct: 687 YAWGNNSMGQCG 698



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDIIN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V  L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTA 735



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4078 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4135

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4136 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4194

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + +A++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4195 ACGLNHTVAVST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV--ACG 4250

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ V  L  V    +A G   T  +S
Sbjct: 4251 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALS 4310

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4311 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 4361

Query: 339  NA 340
             A
Sbjct: 4362 TA 4363



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4052 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4112 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL-- 4169

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 4170 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTVAVSTDGSMVWAFGD 4216

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VDI
Sbjct: 4217 GDYGKLGL---GNSTAKSSPQKVDI 4238



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4091

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4149

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   +   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4150 --AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTVAVS 4205

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4206 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            FG  +   +G   + +G+   H     PQ V  L  V    + +          HT AL+
Sbjct: 4266 FG--QDRLIG---LPEGRARNHNR---PQQVPLLAGVFIEDIAVG-------AEHTLALS 4310

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4311 STGDVYAWGSNSEGQLGLGHTNHVRE 4336



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDIIN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               LAL    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAG 726



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 13/146 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           +E L    +V  +IG+     LS +  VY  +WGN++  + G       +     +G L+
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPITKPKKVGGLD 716

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAV 178
            I + QI+AG  + LA    P    V
Sbjct: 717 GIAIQQISAGTSHSLAWTALPRDRQV 742



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4128 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4187

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4188 GYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKV 4247

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  V   PLL     + +  I
Sbjct: 4248 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQV---PLLA---GVFIEDI 4299

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LAL+   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4300 AVGAEHTLALS---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQ--ISAG 4354

Query: 220  AWHAA 224
              H+A
Sbjct: 4355 RCHSA 4359



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4220 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4279

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  +F+   A+G   T  LS  G VY  +WG+++     LGH    N
Sbjct: 4280 RNH--NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVY--AWGSNSEGQLGLGH---TN 4332

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4333 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4365


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHVREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA   S    ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 3/126 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   +   +P + + L+  +++  + G   T +++ +G V+ FG  S+G+  +   
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSM 279

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             ++  +P+ V  L    V Q A G   T A +   G +Y F  G   +LG     N   
Sbjct: 280 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKC 337

Query: 144 PHPLLG 149
           P P+ G
Sbjct: 338 PSPVKG 343


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 29/350 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P  C SL  +       G      ++D G+VYA G  + G    G+  +  V +P  + 
Sbjct: 3857 SPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGR--LGIGSSDNVATPTPLT 3914

Query: 97   SL--KNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            SL  + I V + AI  G      ++ +G +Y +  G D +LG  T  N   PH L+ +L+
Sbjct: 3915 SLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPH-LIESLK 3973

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            +  V+    G  +    AC     ++Y+ G G  G+LGH     +  P+L+   +   + 
Sbjct: 3974 SKHVIDAGCGSSHS---ACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVT 4030

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             V   +G          G V +WG G YG LG G  E   VPK + +L     I +  G 
Sbjct: 4031 CVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGS 4090

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  ++  G VY++G G+   LGH    D    R     TP+ V  L   +E V+ I  
Sbjct: 4091 QFSMALTTAGHVYTWGKGDYYRLGH---GDDSHQR-----TPRRVLGL-LAHENVIDIGC 4141

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVDI 381
                  + H    TESGK++++G  D+GQ+G    N+ T+  + P+R++I
Sbjct: 4142 G-----SLHCIVCTESGKVFSWGDNDEGQIG----NDTTQAVSVPKRINI 4182



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 133/276 (48%), Gaps = 20/276 (7%)

Query: 89   VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
            V SP    +L  +  +Q A G+  + V+S +G+V+    G+  RLG     N   PH  +
Sbjct: 2946 VKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQ-I 3004

Query: 149  GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             +L    V ++A        LA    G  V+S G G  G+LGHGS      P++IE FQ 
Sbjct: 3005 SSLSMYVVRKVAVSCAGRHVLAVTADG-KVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQA 3063

Query: 209  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             +++   V+ G  H+A V  +G + TWG G  G LGHG+   ++ PK+V+AL  V+   V
Sbjct: 3064 KHIRE--VSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCV 3121

Query: 269  ATGDYTTFVVSE-DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
            A G      ++  D  ++++G G    LG   + DG  +    V   Q++T        +
Sbjct: 3122 ACGSRNAHTLAAGDNSLWAWGDGSFGKLG---LKDGSSSTDVPV---QVIT----FPSNI 3171

Query: 328  VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +QI           +  LT+ GK+Y +G G+  +LG
Sbjct: 3172 IQIECGMHF-----SVLLTKEGKVYTWGKGEYYRLG 3202



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 18/188 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VYS G G  G LG G+   +  P  +    L   + V ++AG+ H+A V +DG + TWG 
Sbjct: 529 VYSWGQGSNGVLGIGNTESQTAPTAVAA--LSGDRIVHISAGSMHSAAVTEDGVLYTWGK 586

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHV--ATGDYTTFVVSEDGDVYSFGCGESASL 295
           G YG LGHGN E + +P +V+ LN VK + V   +GD  T  + + G V+S+G G+   L
Sbjct: 587 GSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKL 646

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G        G+    V  P+ ++ +   +  VV+I   N I     + ALT+ GKLY++G
Sbjct: 647 GR------PGSDQNKV--PKPISGIGSTSP-VVKIICGNQI-----SMALTKDGKLYSWG 692

Query: 356 AGDKGQLG 363
            GD  QLG
Sbjct: 693 CGDTYQLG 700



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 161/339 (47%), Gaps = 32/339 (9%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P+  R+L  +  IQ A G+  + ++SD G+V+A G+ S G    G+ G   +  P  + 
Sbjct: 2948 SPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSSG--RLGIGGFANIRMPHQIS 3005

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            SL    V + A+      VL+       FSWG+    +LGH +  +   P  ++   +  
Sbjct: 3006 SLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPK-MIEIFQAK 3064

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             + +++ G  +  A++       +++ G G  G+LGHG   ++  P+L+   + + +  V
Sbjct: 3065 HIREVSCGTGHSAAVSVNGE---LFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCV 3121

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGD 272
               +   H    G D  +  WG G +G LG   G+   +   +V+   +++  I +  G 
Sbjct: 3122 ACGSRNAHTLAAG-DNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNI--IQIECGM 3178

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
            + + +++++G VY++G GE   LG+++ +            P LV  L   ++ + Q+++
Sbjct: 3179 HFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQP--------IPTLVDGL--ASKTITQVAV 3228

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
                    H  ALT SG++Y++G  + GQ G    NN T
Sbjct: 3229 G-----ALHCLALTSSGEVYSWGDNEHGQQG----NNST 3258



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 14/258 (5%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG   +   E    P    +L G RI+  +AG+  +  +++ G +Y +GK S+G   +G 
Sbjct: 537 NGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGN 596

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
              KL+  P +VE L  + +VQ     G+  T  L   G+V+++  G+  +LG      +
Sbjct: 597 AEDKLI--PTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQN 654

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P P+ G     PVV+I  G    +AL        +YS GCG   +LGHG++   + P+
Sbjct: 655 KVPKPISGIGSTSPVVKIICGNQISMALT---KDGKLYSWGCGDTYQLGHGNQEHVRQPK 711

Query: 202 LIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           LIE       + VV  V+ GA H   +  D  V  WG      +    +   S P +++A
Sbjct: 712 LIEGLS----ETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVNESGDIISS-PLMIEA 766

Query: 260 LNDVKAIHVATGDYTTFV 277
            +   A+ +A G   TFV
Sbjct: 767 ASGKGALLIACGASETFV 784



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 7/234 (2%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           + ++  G+VY++G+ S G    G+  T+  T+P  V +L    +V  + G+  +A ++ +
Sbjct: 521 LALTKDGKVYSWGQGSNGV--LGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G +YT+  G+  RLGH    + + P  + G L  + +VQ+  G      LA   +G  V+
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQ-VW 636

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG 238
           S G G  GKLG       K P+ I      +  PVV +  G   +  + +DG++ +WG G
Sbjct: 637 SWGDGDYGKLGRPGSDQNKVPKPISGIG--STSPVVKIICGNQISMALTKDGKLYSWGCG 694

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
               LGHGN+E    PK+++ L++     V+ G      ++ D DVY++G   S
Sbjct: 695 DTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSS 748



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 21/248 (8%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           GN   A L+++G+VY++  G++  LG     +   P   +  L    +V I+AG  +  A
Sbjct: 517 GNHILA-LTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +        +Y+ G G  G+LGHG+  D+  P ++E    + +  V   +G  H   +  
Sbjct: 575 VT---EDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYSF 287
            G+V +WG G YG LG    +   VPK +  +      + +  G+  +  +++DG +YS+
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           GCG++  LGH       GN+  +V  P+L+  L +     V +          H  ALT 
Sbjct: 692 GCGDTYQLGH-------GNQE-HVRQPKLIEGLSETVVSDVSVGA-------QHCVALTT 736

Query: 348 SGKLYAFG 355
              +YA+G
Sbjct: 737 DSDVYAWG 744



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 154/333 (46%), Gaps = 23/333 (6%)

Query: 52   AAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
            A + AGR +L ++  G+V+++G   +G+  +G    +    P+++E  +   + + + G 
Sbjct: 3016 AVSCAGRHVLAVTADGKVFSWGDGQYGQLGHG--SLQSYDRPKMIEIFQAKHIREVSCGT 3073

Query: 111  FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
              +A +S  G ++T+  G D RLGH    N  +P  L+  LE + +  +A G      LA
Sbjct: 3074 GHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPK-LVRALEKVRISCVACGSRNAHTLA 3132

Query: 171  CQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
               +  ++++ G G  GKLG   GS + +   ++I          + +  G   + ++ +
Sbjct: 3133 AGDN--SLWAWGDGSFGKLGLKDGSSSTDVPVQVIT----FPSNIIQIECGMHFSVLLTK 3186

Query: 229  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
            +G+V TWG G Y  LG+ +   + +P +V  L       VA G      ++  G+VYS+G
Sbjct: 3187 EGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWG 3246

Query: 289  CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
              E    G+N+      NR      PQ+V SLK    R+ +I+  +S        +LT +
Sbjct: 3247 DNEHGQQGNNSTI---CNRK-----PQIVASLK--GHRICKIACGSSHSIAFAQGSLTTA 3296

Query: 349  GKLYAFG-AGDKGQLGIELVNNQTERGNPERVD 380
             K      +  K  LG  +V+ ++     E  D
Sbjct: 3297 VKFSPISFSNSKDPLGASIVHGKSSDDAKETKD 3329



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 21/244 (8%)

Query: 125  FSWG-NDAR-LGHHTEPNDVEPHPLLGTLENIPVVQIAAG-YCYLLALACQPSGMAVYSV 181
            F WG ND R LG       V+      TL  +  +Q A G  C  +          V++ 
Sbjct: 2927 FVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVV----SDDGKVFAC 2982

Query: 182  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            G G  G+LG G   + + P  I    +  ++ V V+    H   V  DG+V +WG G+YG
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042

Query: 242  CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
             LGHG+ +    PK+++         V+ G   +  VS +G+++++G G    LGH    
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGH---- 3098

Query: 302  DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
             G  N   N   P+LV +L++     V+IS       NAHT A  ++  L+A+G G  G+
Sbjct: 3099 -GDSN---NQTKPKLVRALEK-----VRISCVACGSRNAHTLAAGDNS-LWAWGDGSFGK 3148

Query: 362  LGIE 365
            LG++
Sbjct: 3149 LGLK 3152



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 13/142 (9%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H   + +DG+V +WG G  G LG GN E ++ P  V AL+  + +H++ G   +  V+ED
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G +Y++G G    LGH    D         L P +V  L  V  ++VQ+   +    +AH
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDK--------LIPTIVEGLNGV--KIVQVDCGSG---DAH 625

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T AL ++G+++++G GD G+LG
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLG 647



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 12/246 (4%)

Query: 30   LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
            LG  VN   P    SL+   +I A  G+  +  I+D G +Y +GK  +G   +    T+ 
Sbjct: 3957 LGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQ- 4015

Query: 89   VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHP 146
               P+LV +LK   V   A G+     L        FSWG+    +LG         P  
Sbjct: 4016 -HKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKK 4074

Query: 147  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            +  +L    V+++  G  + +AL    +   VY+ G G   +LGHG  + ++ PR +   
Sbjct: 4075 I-DSLTGKHVIKLLCGSQFSMALT---TAGHVYTWGKGDYYRLGHGDDSHQRTPRRV--L 4128

Query: 207  QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             LL  + V+ +  G+ H  V  + G+V +WG    G +G+   +  SVPK +   +++  
Sbjct: 4129 GLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICI 4188

Query: 266  IHVATG 271
             HVA G
Sbjct: 4189 DHVACG 4194



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 21/194 (10%)

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
            S  +V+  G    G+LG       K PRL E    LN  P ++  G      V  DG+V 
Sbjct: 3832 STFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELN--PAMITGGEQTLFAVTDDGKVY 3889

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVSEDGDVYSFGC 289
              G+  +G LG G+ +  + P  + +L      VK I + +G      V+  G++Y++G 
Sbjct: 3890 ASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 290  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
            GE   LG             N+  P L+ SLK  ++ V+     +S     H+  +T+ G
Sbjct: 3950 GEDGKLGLGTT--------VNMNVPHLIESLK--SKHVIDAGCGSS-----HSACITDDG 3994

Query: 350  KLYAFGAGDKGQLG 363
             LY +G G  G+LG
Sbjct: 3995 SLYTWGKGRYGRLG 4008



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 11/130 (8%)

Query: 235  WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            WG    G LG         P++ ++L+++    +  G+ T F V++DG VY+ G      
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGR 3898

Query: 295  LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
            LG  +          NV TP  +TSL      V +I++ +      H  A+T  G+LYA+
Sbjct: 3899 LGIGS--------SDNVATPTPLTSLATRGIAVKKIAIHSG---GKHCLAVTTQGELYAW 3947

Query: 355  GAGDKGQLGI 364
            G G+ G+LG+
Sbjct: 3948 GEGEDGKLGL 3957


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 164/347 (47%), Gaps = 37/347 (10%)

Query: 32  REVNGTPLYCRSLQ-GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           +E   TP    +L+    + + + G   T  +   G VY  G + FG+    +   K  T
Sbjct: 19  QEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQ----LGQEKSHT 74

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHP 146
           +P+ V +++   + +   G   T  +S +G V  F+WG+++     LG   +        
Sbjct: 75  NPESVHAIETFTITKVTCGKAHTVAVSDQGLV--FAWGDNSYGQIGLGSKVKEKVQTIPK 132

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           +L  L  + VVQIA G  + +AL    SG  ++  G    G+LG G    + H  + E  
Sbjct: 133 MLKGLAKMSVVQIACGCNHSMALTI--SG-HLFCWGDNSSGQLGIG----KTHSSMSEPA 185

Query: 207 QLLNLQPV---VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            +L+L  V   +++AG  H+  +   G +  WG   YG LG  +     +P ++++L   
Sbjct: 186 PVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQ 245

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
              +V+ G+  T V++ DG V++FGCG S  LGHN+      N H    TP+ V  L  +
Sbjct: 246 GVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNS------NHHE--YTPRKVFEL--M 295

Query: 324 NERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNN 369
              V QI+        AHT AL   SG++Y FG G  GQLG+ + NN
Sbjct: 296 GSVVTQIACG-----RAHTLALVPSSGRVYTFGRGGDGQLGLGVTNN 337


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 155/320 (48%), Gaps = 34/320 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           Q A G   T+ ++  G+VYA G +   +      G +L T  P L+  L++  V+Q + G
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQL-----GHELPTKRPLLIPELQDYVVIQISCG 98

Query: 110 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  LS  G+V   SWG++   +LGH T+   V+   ++  L +  VVQIA G  + L
Sbjct: 99  SRHSLALSEWGQV--LSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSL 156

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           AL    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++
Sbjct: 157 ALT---SCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI 213

Query: 227 GQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            + G V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V
Sbjct: 214 SKSGAV--FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           ++ G G    LGH           +N + P++V  L  +   + Q++  N      HT A
Sbjct: 272 FTCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLA 316

Query: 345 LTES-GKLYAFGAGDKGQLG 363
           L  S G++YAFG G  GQLG
Sbjct: 317 LVPSRGRVYAFGLGSSGQLG 336



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 141/276 (51%), Gaps = 20/276 (7%)

Query: 30  LGREV-NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG E+    PL    LQ   +IQ + G+  ++ +S+ GQV ++G +  G+  +     ++
Sbjct: 72  LGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATD-KEI 130

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE--P 144
           V  P++V  L +  VVQ A GN  +  L+  G +Y  SWG++   +LG ++ P D+    
Sbjct: 131 VQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNS-PKDLTHCN 187

Query: 145 HPL-LGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           +PL L TL  IP+  IA G  + +L++     SG AV+  G    G+LG     +  +P 
Sbjct: 188 YPLRLTTLLGIPLAAIACGGNHSFLIS----KSG-AVFGWGRNNCGQLGLNDEANRAYPT 242

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  + L ++   VA G   +  +  +G V T G G YG LGHG    E +P++V  L 
Sbjct: 243 QLKTLRTLGVR--FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM 300

Query: 262 DVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 296
                 VA G+ +T  +V   G VY+FG G S  LG
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G  + GV   K +T 
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG--QLGVNSPKDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   P  I       +Q V  A G  H   +  +G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQV--ACGHRHTLFLTANGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   +  LGH  E     P ++  L D   I ++ G   +  +SE G V S+G  +
Sbjct: 61  VYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             V  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIVQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+    + T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192



 Score = 44.3 bits (103), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GRVY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G++  K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 32/324 (9%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           +   I Q A G   T++I+  G++Y+ G + +G+  +     +L    QL+  L      
Sbjct: 59  KAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFK 114

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAA 161
           +AA G + T  ++  G++  FSWG++   +LG +++ N +E  P ++ TL    VVQIA 
Sbjct: 115 KAACGAYHTLAINEWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIAC 171

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGA 220
           G  +  AL    +   +YS G    G+LG G+ T  E  P+ I  F  + +    +A G 
Sbjct: 172 GMKHAFALT---NNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAF--IGIPIAFIACGG 226

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +H+  + + G V  WG   +G LG  + +  ++P  +Q L + K  + A G+  +  ++ 
Sbjct: 227 YHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DG V++ G G    LGH +        ++N + P+ V  L  +   V QIS         
Sbjct: 287 DGGVFTCGAGMYGQLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR----- 331

Query: 341 HTFALTES-GKLYAFGAGDKGQLG 363
           HT AL  S G++YA+G G  GQLG
Sbjct: 332 HTLALVPSRGRVYAWGLGGAGQLG 355



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 19/270 (7%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIG 109
           +AA GA  T+ I++ GQ++++G ++  E + G+     + +SP++V++L    VVQ A G
Sbjct: 115 KAACGAYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLA 168
                 L+  G +Y++   ++ +LG  T+   +++P   +     IP+  IA G  +  +
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPK-FISAFIGIPIAFIACGGYH--S 229

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +A   SG AV+  G    G+LG     D   P  ++  Q  N +    A G   +  +  
Sbjct: 230 IAISKSG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTV 286

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 287
           DG V T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++
Sbjct: 287 DGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 346

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLV 317
           G G +  LG+++          +V TPQ+V
Sbjct: 347 GLGGAGQLGNHST--------RSVTTPQVV 368



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 18/231 (7%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           +  +P   ++L    ++Q A G      +++ G++Y++G +S G+   G   TK    P+
Sbjct: 151 MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTD-TKYEIKPK 209

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL---L 148
            + +   I +   A G + +  +S+ G V  F WG +   +LG     ND +   L   L
Sbjct: 210 FISAFIGIPIAFIACGGYHSIAISKSGAV--FGWGKNTFGQLG----LNDTQDRNLPCQL 263

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL+N  +   A G  + + L        V++ G G+ G+LGHGS ++E  PR +   +L
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDG---GVFTCGAGMYGQLGHGSNSNEILPRQV--MEL 318

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           +      ++ G  H  A+V   GRV  WG G  G LG+ +    + P+VV 
Sbjct: 319 MGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH 369



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           ++  G  + G+LG G   DE    PR ++  +   +Q +  A G  +  V+ Q G + + 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G   YG LGH  E+     +++  L+       A G Y T  ++E G ++S+G      L
Sbjct: 86  GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G N+       ++    +P++V +L      VVQI+         H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189

Query: 356 AGDKGQLGI 364
           +  +GQLG+
Sbjct: 190 SNSEGQLGL 198



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           + QIA G  Y + +        +YS G    G+LGH      K  +LI        +   
Sbjct: 63  IQQIACGENYTVVIT---QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA- 116

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 274
            A GA+H   + + G++ +WG    G LG  ++   ES P++V+ L     + +A G   
Sbjct: 117 -ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            F ++ +G++YS+G      LG        G      + P+ +++        + I +  
Sbjct: 176 AFALTNNGELYSWGSNSEGQLG-------LGTDTKYEIKPKFISAF-------IGIPIAF 221

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
                 H+ A+++SG ++ +G    GQLG+   N+  +R  P
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGL---NDTQDRNLP 260



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 24/159 (15%)

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVA 269
           +PV+      H     +   +  WG   +G LG G  E E++  P+ +      +   +A
Sbjct: 13  EPVIAVEYPLH-----KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIA 67

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G+  T V+++ G++YS G  +   LGH      +G +       QL+  L         
Sbjct: 68  CGENYTVVITQIGEIYSCGNNDYGQLGHE-----KGRKRL-----QLIPGLDA------- 110

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
                +     HT A+ E G+L+++G+  +GQLG+   N
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKN 149



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQ  +I  AA G   ++ ++  G V+  G   +G+  +G    +++  P+ V  
Sbjct: 260 PCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL--PRQVME 317

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q + G   T A++   GRVY +  G   +LG+H+  +   P  + G
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 44/308 (14%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I D G V+ FGK  F +        K          +KN  VV+ A G+  +AV++  GR
Sbjct: 11  IPDLGAVFTFGKSKFADN----IANKFW--------IKNDGVVEMACGDEHSAVVTESGR 58

Query: 122 VYTF---SWGNDARLGHH---TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           +Y F    WG    LGH     +P+ V+P      L+   V ++A G  + +  +   SG
Sbjct: 59  LYVFGSNDWGQ-LGLGHTKSLNKPSFVKP------LKPEKVRKVACGRNHTIVYS--ESG 109

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             ++S GC   G+LGH  + +E  P+ IE    + ++ +  A G +H+ ++ +DG V  W
Sbjct: 110 -KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQI--ACGTYHSIILSEDGDVYVW 166

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G    G LG G E   S+PK ++   +V  + V+ G Y T +V+ DG +Y+FG  E   L
Sbjct: 167 GNNNEGQLGLGEEVENSLPKKLKFKKEV--VSVSCGYYHTALVTRDGFLYTFGENELGKL 224

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G ++      ++ +N   PQ V ++   N+  + +S         HT A+T+ G  YA+G
Sbjct: 225 GLSS------SQLSNTTVPQSV-AMPADNDEYISVSC-----GARHTVAITKQGHCYAWG 272

Query: 356 AGDKGQLG 363
            G +GQLG
Sbjct: 273 DGSQGQLG 280



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 134/262 (51%), Gaps = 12/262 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P + + L+  ++ + A G   T++ S++G++++FG +  G+  +  +  +L+  P+ +ES
Sbjct: 81  PSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELL--PKEIES 138

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           +  + + Q A G + + +LS +G VY +   N+ +LG   E  +  P  L    E   VV
Sbjct: 139 IPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VV 195

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TDEKHPRLIEQFQLLNLQPVV 215
            ++ GY Y  AL  +   +  Y+ G    GKLG  S   ++   P+ +      N + + 
Sbjct: 196 SVSCGY-YHTALVTRDGFL--YTFGENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYIS 251

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYT 274
           V+ GA H   + + G    WG G  G LGHG +  E + PK ++ L+  K I V+ G+  
Sbjct: 252 VSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESH 311

Query: 275 TFVVSEDGDVYSFGCGESASLG 296
           T VV+E G V++FG G    LG
Sbjct: 312 TAVVTESGKVFTFGDGRHGKLG 333



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 14/261 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S+  + I Q A G   ++++S+ G VY +G ++ G+   G +    +  P+ ++ 
Sbjct: 133 PKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSL--PKKLKF 190

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIP 155
            K   VV  + G + TA+++R+G +YTF      +LG  +    N   P  +    +N  
Sbjct: 191 KKE--VVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDE 248

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPV 214
            + ++ G  + +A+  Q      Y+ G G  G+LGHG++  E   P+ I++  L   + +
Sbjct: 249 YISVSCGARHTVAITKQG---HCYAWGDGSQGQLGHGTKLLEVNEPKQIKK--LSGQKCI 303

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGD 272
            V+ G  H AVV + G+V T+G GR+G LG G +   +   P  +   N    ++V+ G 
Sbjct: 304 SVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGG 363

Query: 273 YTTFVVSEDGDVYSFGCGESA 293
             T V++   +   F  GE++
Sbjct: 364 CHTLVLAVHKNKDDFVDGENS 384



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 15/163 (9%)

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           +  +F + N   V +A G  H+AVV + GR+  +G   +G LG G+ +  + P  V+ L 
Sbjct: 29  IANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK 88

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             K   VA G   T V SE G ++SFGC E   LGH    D +     N L P+ + S+ 
Sbjct: 89  PEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGH---VDKE-----NELLPKEIESIP 140

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           Q+   + QI+     Y   H+  L+E G +Y +G  ++GQLG+
Sbjct: 141 QM--EIKQIAC--GTY---HSIILSEDGDVYVWGNNNEGQLGL 176



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           ++N  VV++A G  +   +    SG  +Y  G    G+LG G       P  ++  +   
Sbjct: 35  IKNDGVVEMACGDEHSAVVT--ESGR-LYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK 91

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           ++ V  A G  H  V  + G++ ++G    G LGH ++E E +PK ++++  ++   +A 
Sbjct: 92  VRKV--ACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIAC 149

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G Y + ++SEDGDVY +G      LG        G    N L  +L     +  + VV +
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG-------LGEEVENSLPKKL-----KFKKEVVSV 197

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           S     Y+  HT  +T  G LY FG  + G+LG+
Sbjct: 198 SCG---YY--HTALVTRDGFLYTFGENELGKLGL 226


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 148/327 (45%), Gaps = 40/327 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+++G++  G   +GV     V  P+LV+ LKN  V   A G + 
Sbjct: 311 ACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSD--VLHPKLVDGLKNTNVELVACGEYH 368

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           +  ++  G +YT  WG    N   LG+  E ++  P  L G LE I V  ++ G  +   
Sbjct: 369 SCAVTLSGDLYT--WGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAV 426

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E  +   L+ V  A G WH A V +
Sbjct: 427 VT---SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLK--GLRTVRAACGVWHTAAVVE 481

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E   VP  V AL +     VA G   T 
Sbjct: 482 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTV 541

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      LG N  ADG+         P  V    ++++  V+  L    
Sbjct: 542 ALTTTGHVYTMGSPVYGQLG-NPQADGK--------LPVRVEG--KLSKNFVE-ELDCGA 589

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
           Y   H   LT   ++Y +G G  G+LG
Sbjct: 590 Y---HVAVLTSRTEVYTWGKGANGRLG 613



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 26/272 (9%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           ++  RN   N + +++NG       L+GI +   + G   T +++ +GQ++ FG  +FG 
Sbjct: 390 LLGYRNEASNWVPKKLNGP------LEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGV 443

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL------------SREGRVYTFS 126
             +G +  + V++P+ VESLK +  V+AA G + TA +               G+++T+ 
Sbjct: 444 LGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 501

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
            G+  RLGH  + + + P   +  L      Q+A G+   +AL    +   VY++G  + 
Sbjct: 502 DGDKGRLGHGDKESRLVP-TCVAALVEPNFCQVACGHSMTVALT---TTGHVYTMGSPVY 557

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LG+  + D K P  +E     N    +   GA+H AV+     V TWG G  G LGHG
Sbjct: 558 GQLGN-PQADGKLPVRVEGKLSKNFVEEL-DCGAYHVAVLTSRTEVYTWGKGANGRLGHG 615

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           + +  S P +V+AL D +   V  G   T  +
Sbjct: 616 DTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 48/312 (15%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + + + P  L+ 
Sbjct: 296 PKALESAVLLDVQTIACGRRHAALVTKQGEV--FSWGEELGGRLGHGVDSDVLHPK-LVD 352

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-----CGLGGKLGHGSRTDEKHPRLIE 204
            L+N  V  +A G  +  A+    SG  +Y+ G     CGL   LG+ +      P+ + 
Sbjct: 353 GLKNTNVELVACGEYHSCAVTL--SG-DLYTWGGSSHNCGL---LGYRNEASNWVPKKL- 405

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  +    V+ G WH AVV   G++ T+G G +G LGHG+    S P+ V++L  ++
Sbjct: 406 NGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLR 465

Query: 265 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            +  A G + T  V E             G ++++G G+   LGH       G++ +  L
Sbjct: 466 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKESR-L 517

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P  V +L + N    Q++  +S+     T ALT +G +Y  G+   GQLG    N Q +
Sbjct: 518 VPTCVAALVEPN--FCQVACGHSM-----TVALTTTGHVYTMGSPVYGQLG----NPQAD 566

Query: 373 RGNPERVDIDLS 384
              P RV+  LS
Sbjct: 567 GKLPVRVEGKLS 578


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  VVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              V  G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 154/332 (46%), Gaps = 26/332 (7%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           V   P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+
Sbjct: 21  VVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNK----PE 76

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            + +L +  +V  A G   +  LS +G+++++  G+D +LG  T  + V    L+  L  
Sbjct: 77  QIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQ 212
             ++Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L 
Sbjct: 137 QTILQVSCGNWHCLALAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 193

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            VV  AG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+
Sbjct: 194 QVV--AGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+ 
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIAC 301

Query: 333 TNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                   HT A    SG +YAFG G +GQLG
Sbjct: 302 GRQ-----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+ AG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVVAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 23  RNGKRNL-LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           RN    L LG+E     +P   RSL+GI + Q  AG   +  +S +G V+ +G ++ G+ 
Sbjct: 163 RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQ- 221

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
             G+   K   SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  
Sbjct: 222 -LGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           ++V P  +L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K 
Sbjct: 281 DEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKC 337

Query: 200 PRLIEQF 206
           P  ++ +
Sbjct: 338 PSPVKGY 344


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 160/342 (46%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q A G     L++  G+V+ +G++S G   +G+      + P LVE
Sbjct: 257 TPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVE 314

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
            L    V   A G + T  +S  G ++T  WG    N   LGH TE +   P  + G LE
Sbjct: 315 FLAVNNVDFVACGEYHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLE 372

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + V+ +A G  +  ALA   S   +++ G G  G LGHG R    +PR   + Q+L+ L
Sbjct: 373 GLQVLSVACG-TWHSALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGL 426

Query: 212 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + + VA G WH A    V+ Q G      ++ TWG G    LGHG++E   +P  V AL 
Sbjct: 427 KTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALI 486

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           D     +A G   T  ++  G V++ G      LG N ++DG+         P LV   K
Sbjct: 487 DYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-K 536

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V E V +IS     Y   H   LT   +++ +G G  G+LG
Sbjct: 537 LVGEFVEEISC--GAY---HVAVLTSRSEVFTWGRGANGRLG 573



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 32/292 (10%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +ES   + V Q A G    A+++R+G V+T  WG ++  RLGH  + +   PH 
Sbjct: 255 VLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGIDNDFSRPH- 311

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+  L    V  +A G  +  A++     +  +  G    G LGHG+      P+ +   
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG- 369

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  LQ + VA G WH+A+   +G++ T+G G +G LGHG+ E    P+ VQ L+ +K I
Sbjct: 370 PLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTI 429

Query: 267 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            VA G + T     V+S+ G       ++++G G+   LGH +            L P  
Sbjct: 430 KVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTC 481

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
           V++L   N    Q++  +++     T ALT SG ++  G    GQLG  L +
Sbjct: 482 VSALIDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSD 526



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 18/242 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G + +  V  P+ V+ L  +  
Sbjct: 371 LEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRES--VPYPREVQILSGLKT 428

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + TA    V+S+ G      +++T+  G+  RLGH ++   + P   +  L +
Sbjct: 429 IKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPT-CVSALID 487

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +AL    SG  V+++G    G+LG+   +D + P L+ Q +L+    
Sbjct: 488 YNFHQLACGHTMTVALTT--SGH-VFTMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFV 542

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ GA+H AV+     V TWG G  G LGHG+ E    P  V+AL D     ++ G  
Sbjct: 543 EEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSN 602

Query: 274 TT 275
            T
Sbjct: 603 FT 604



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 31/290 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE-SLKNIFVVQAAIGN 110
           A G   T  +S +G ++ +G  +      G  GT++    P+ V   L+ + V+  A G 
Sbjct: 325 ACGEYHTCAVSTSGDLFTWGDGTHNAGLLG-HGTEVSHWIPKRVSGPLEGLQVLSVACGT 383

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLAL 169
           + +A+ +  G+++TF  G    LGH     +  P+P  +  L  +  +++A G  +  A+
Sbjct: 384 WHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACGVWHTAAI 441

Query: 170 -------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
                      S   +++ G G   +LGHGS+     P  +      N     +A G   
Sbjct: 442 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH--QLACGHTM 499

Query: 223 AAVVGQDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
              +   G V T G   YG LG+    G   C    K+V    +     ++ G Y   V+
Sbjct: 500 TVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVE----EISCGAYHVAVL 555

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           +   +V+++G G +  LGH    D +        +P  V +LK  N + +
Sbjct: 556 TSRSEVFTWGRGANGRLGHGDTEDRR--------SPTFVEALKDRNVKSI 597


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G++  K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RI     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  +     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 164/354 (46%), Gaps = 34/354 (9%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G+  T+ + D G VY  G +  G+  +     K  
Sbjct: 1   IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK-- 58

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
             P  V +L    +V  + G   T  L+ +G+V  FSWG+ A  ++G     + +     
Sbjct: 59  --PDQVGALDAQTIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGLSVAEDYIRVPRN 114

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQF 206
           + +L +I +VQ+A G+ + LAL+ +     +YS G    G+LG GS    E  PR I+  
Sbjct: 115 IKSLYDIQIVQVACGHHHSLALSKESD---IYSWGQNQYGQLGLGSEIKKESAPRHIKS- 170

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  +    +AAG  H+  +   G +  WG  ++G LG  +E   S P ++++L   K I
Sbjct: 171 -LAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKII 229

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           H+  G+  T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   
Sbjct: 230 HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSI 279

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
           V QI+         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 280 VTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 328


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 38/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           I +   A G     +++  G+V+++G D+ G   + V  +  V+ P+++ESL +  V   
Sbjct: 215 IDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAI 272

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G   T  +S  G +Y   WG         G   + +   PH L G L+ I +++IA G
Sbjct: 273 AFGAKHTCAVSISGELY--EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 330

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + +   ++   S   +++ G G  G LGHG       P+ +E   L  ++   +A G WH
Sbjct: 331 HWHTAIIS---SAGQIFTYGDGTFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWH 385

Query: 223 AAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            A +             G++ TWG    G LGH +++ + VP  V+ LND     V+   
Sbjct: 386 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 445

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T V++  G V++ G  E   LG+    D          T   +       E V +IS 
Sbjct: 446 AQTIVLTITGVVFTIGSKEHGRLGNPLSED----------TSICLIEGPLKTEFVREISS 495

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +S     H   LT +GK++ +G G +GQLG+
Sbjct: 496 GSS-----HIAVLTMNGKVFTWGKGTEGQLGL 522



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 30/251 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L GI I++ A G   T +IS AGQ++ +G  +FG   +G   T  V  P+ VESLK +  
Sbjct: 319 LDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHG--DTLTVARPKQVESLKGVRA 376

Query: 104 VQAAIGNFFTA-VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLL 148
              A G + TA ++ R G V +       F+WG+  R  LGH  +     P  VEP    
Sbjct: 377 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP---- 432

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L +    Q++      + L    +G+ V+++G    G+LG+   +++    LIE    
Sbjct: 433 --LNDFDFAQVSCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--P 484

Query: 209 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  + V  +++G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   
Sbjct: 485 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 544

Query: 268 VATGDYTTFVV 278
           +A G   T  +
Sbjct: 545 IACGFNFTMAI 555



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 38/298 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHP 146
           V+ P+L+ +   I V   A G    A+++++G V  FSWG  N  RLGH    +  +P  
Sbjct: 203 VSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV--FSWGVDNGGRLGHKVSVSVSDPK- 259

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           ++ +L +  V  IA G  +  A++   SG  +Y  G G    G  G   +  +  P  + 
Sbjct: 260 IIESLASTRVKAIAFGAKHTCAVSI--SG-ELYEWGEGTHCLGLWGDQYQRSQWFPHKL- 315

Query: 205 QFQLLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            F  L+ +  + +A G WH A++   G++ T+G G +G LGHG+    + PK V++L  V
Sbjct: 316 -FGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGV 374

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +A  +A G + T  + E           G ++++G  +   LGH   AD +       L 
Sbjct: 375 RAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGH---ADKKMK-----LV 426

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           P  V  L   +    Q+S        A T  LT +G ++  G+ + G+LG  L  + +
Sbjct: 427 PTCVEPLNDFD--FAQVSCA-----KAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTS 477


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 30/295 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +V  PQ+   + +  V + A G   +  L  +G VYT       +LGH  E N  E    
Sbjct: 21  IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ--- 77

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
           +G L +  +V +A G  + LAL+ Q     ++S G G  G+LG  +  D    PRLI++ 
Sbjct: 78  IGALADQHIVHVACGESHSLALSDQGQ---LFSWGAGSDGQLGLMTIEDSVAVPRLIQK- 133

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVK 264
             LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V++L  + 
Sbjct: 134 --LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIP 191

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              V  G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q         
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--------- 242

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP RV
Sbjct: 243 -KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---NPRRV 288



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS +G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  VV 
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV- 196

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            AG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 197 -AGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+   + 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDG--QLGLMTIED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+ AG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVVAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 23  RNGKRNL-LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           RN    L LG+E     +P   RSL+GI + Q  AG   +  +S +G V+ +G ++ G  
Sbjct: 163 RNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG-- 220

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
           + G+   K   SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           ++V P  +L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K 
Sbjct: 281 DEVNPRRVL-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKC 337

Query: 200 PRLIEQF 206
           P  ++ +
Sbjct: 338 PSPVKGY 344


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 159/344 (46%), Gaps = 28/344 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G   T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-TEPNDVEPHPLL 148
             P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG   TE     P  + 
Sbjct: 73  KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNI- 131

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQ 207
            +L ++ +VQ+A GY + LAL+    G  V+S G    G+LG G     +  P+LI+   
Sbjct: 132 KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKS-- 186

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           LL +    +AAG  H+  +   G V  WG  ++G LG  +E    VP ++++L   K ++
Sbjct: 187 LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVY 246

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           ++ G+  T  ++++G V++FG G    LGHN+       R    L   +VT         
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVT--------- 297

Query: 328 VQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 370
            QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 298 -QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 147/311 (47%), Gaps = 28/311 (9%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +G  SFG+   G    ++V  P+      N  V     G   T  +  +G VYT    + 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LGH       E    +G L+   +V ++ G  + L L  +     VY+ G    G+LG
Sbjct: 64  GQLGHEKSRKRPEQ---VGALDAQNIVAVSCGEAHTLTLNDKGQ---VYAWGFAADGQLG 117

Query: 191 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 248
             G+    + PR I+   L ++Q V VA G +H+  + +   V +WG  ++G LG G + 
Sbjct: 118 LPGTEEYTRVPRNIK--SLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDL 175

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           + ++ P+++++L  +    +A G   +F ++  G V+ +G  +   LG N     + +R+
Sbjct: 176 KKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLN----DENDRY 231

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
                P L+ SL+  ++++V IS         HT ALT+ G ++ FGAG  GQLG    N
Sbjct: 232 ----VPNLLKSLR--SQKIVYISCGED-----HTAALTKEGGVFTFGAGGYGQLG---HN 277

Query: 369 NQTERGNPERV 379
           +     NP +V
Sbjct: 278 STGHEINPRKV 288



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI   Q AAG   +  ++ +G V+ +G++ FG+     +  + V  P L++
Sbjct: 180 SPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V  + G   TA L++EG V+TF  G   +LGH++  +++ P  +   + NI V
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  +  A    PS   +YS G G  G+LG GS ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL+  +I+  + G   T  ++  G V+ FG   +G+  +   G ++  +P+ V 
Sbjct: 232 VPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVF 289

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            L    V Q A G   T A +   GR+Y+F  G + +LG  +  N   P P+ G  
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 44  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 99

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 100 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 159

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 160 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 214

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 215 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 274

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 275 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 319

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 320 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 89  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 146

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 147 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 204

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 205 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 257

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 258 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 317

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 318 FVPSSGRIYSFGLGGNGQLG 337



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 69

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 70  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 123

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 124 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 182 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 237

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 238 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 284

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 285 -HNSTSHEINPRKV 297



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 120 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 179

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 180 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 236

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 237 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 292

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 293 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 350

Query: 258 Q 258
           +
Sbjct: 351 K 351


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 30/345 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  E+   P  C    G ++     G   T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH----EKPR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+ V +L    +V  + G   T  L+ +G+++++  G+D +LG +     V     + 
Sbjct: 73  KKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIK 132

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQF 206
            L ++ + Q+A GY +  AL+    G  V+S G    G+LG   HGS      P++I+  
Sbjct: 133 CLSDVQIAQVACGYRHSHALS---KGGQVFSWGQNQFGQLGLGMHGSSIST--PQIIQSL 187

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           Q   +    ++AG  H+  +   G V  WG  ++G LG  +      P ++++L   + I
Sbjct: 188 Q--GIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVI 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           +V+ G+  T  ++++G V++FG G    LGHN+       R    L   +VT        
Sbjct: 246 YVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVT-------- 297

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 370
             QIS         HT A T  SGK+Y+FG G  GQLG     N+
Sbjct: 298 --QISCGRQ-----HTLAFTPSSGKMYSFGLGGNGQLGTRSTCNR 335



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +SLQGI   Q +AG   +  I+ +G V+ +G++ FG+   G+  T     P L++
Sbjct: 180 TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQL--GLNDTNDRWFPALLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  V+  + G   TA L++EG V+TF  G   +LGH++  +++ P  +   + NI V
Sbjct: 238 SLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNI-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QI+ G  + LA    PS   +YS G G  G+LG  S  + K P
Sbjct: 297 TQISCGRQHTLAFT--PSSGKMYSFGLGGNGQLGTRSTCNRKSP 338



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  E      V     G   T  L  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  +P     H +   L+   +V ++ G  + LAL  +     ++S G G  G
Sbjct: 61  NDLGQLGHE-KPRKKPEHVV--ALDAQIIVAVSGGESHTLALNDKGQ---IFSWGLGSDG 114

Query: 188 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  +  +  + PR I+   L ++Q   VA G  H+  + + G+V +WG  ++G LG G
Sbjct: 115 QLGLNNFEECVRVPRNIK--CLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                 S P+++Q+L  +    ++ G   +F ++  G V+ +G  +   LG N   D   
Sbjct: 173 MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDR-- 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  ++RV+ +S         HT ALT+ G ++ FGAG  GQLG  
Sbjct: 231 ------WFPALLKSLR--SQRVIYVSCGED-----HTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 STNHEI---NPRKV 288



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 8/125 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  R+I  + G   T  ++  G V+ FG   +G+   G   T    +P+ V  
Sbjct: 233 PALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTNHEINPRKVFE 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L    V Q + G   T A     G++Y+F  G + +LG  +  N   P P+ G     P 
Sbjct: 291 LMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKG-----PF 345

Query: 157 VQIAA 161
           V  AA
Sbjct: 346 VASAA 350


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   E        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G++  K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 159/344 (46%), Gaps = 28/344 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G   T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-TEPNDVEPHPLL 148
             P+ V +L    +V  + G   T  L+ +G+VY + +  D +LG   TE     P  + 
Sbjct: 73  KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNI- 131

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQ 207
            +L ++ +VQ+A GY + LAL+    G  V+S G    G+LG G     +  P+LI+   
Sbjct: 132 KSLSDVQIVQVACGYYHSLALS---KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKS-- 186

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           LL +    +AAG  H+  +   G V  WG  ++G LG  +E    VP ++++L   K ++
Sbjct: 187 LLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVY 246

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           ++ G+  T  ++++G V++FG G    LGHN+       R    L   +VT         
Sbjct: 247 ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVT--------- 297

Query: 328 VQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQ 370
            QI+         HT A   S G++Y+FG G  GQLG+   +N+
Sbjct: 298 -QIACGRQ-----HTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 147/311 (47%), Gaps = 28/311 (9%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +G  SFG+   G    ++V  P+      N  V     G   T  +  +G VYT    + 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LGH       E    +G L+   +V ++ G  + L L  +     VY+ G    G+LG
Sbjct: 64  GQLGHEKSRKRPEQ---VGALDAQNIVAVSCGEAHTLTLNDKGQ---VYAWGFAADGQLG 117

Query: 191 -HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 248
             G+    + PR I+   L ++Q V VA G +H+  + +   V +WG  ++G LG G + 
Sbjct: 118 LPGTEEYTRVPRNIK--SLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDL 175

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           + ++ P+++++L  +    +A G   +F ++  G V+ +G  +   LG N     + +R+
Sbjct: 176 KKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLN----DENDRY 231

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
                P L+ SL+  ++++V IS         HT ALT+ G ++ FGAG  GQLG    N
Sbjct: 232 ----VPNLLKSLR--SQKIVYISCGED-----HTAALTKEGGVFTFGAGGYGQLG---HN 277

Query: 369 NQTERGNPERV 379
           +     NP +V
Sbjct: 278 STGHEINPRKV 288



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI   Q AAG   +  ++ +G V+ +G++ FG+     +  + V  P L++
Sbjct: 180 SPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV--PNLLK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V  + G   TA L++EG V+TF  G   +LGH++  +++ P  +   + NI V
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-V 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  +  A    PS   +YS G G  G+LG GS ++ K P
Sbjct: 297 TQIACGRQHTSAFV--PSTGRIYSFGLGGNGQLGMGSTSNRKSP 338



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL+  +I+  + G   T  ++  G V+ FG   +G+  +   G ++  +P+ V 
Sbjct: 232 VPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI--NPRKVF 289

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            L    V Q A G   T A +   GR+Y+F  G + +LG  +  N   P P+ G  
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 147/324 (45%), Gaps = 35/324 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G++S G   +GV   K V  P+LVESL    V   A G F 
Sbjct: 286 ACGVRHAALVTRQGEVFTWGEESGGRLGHGV--GKDVIQPRLVESLAVSTVDFVACGEFH 343

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           T  ++  G +YT+  G  N   LGH  + +   P  + G LE +   Q+A+  C     A
Sbjct: 344 TCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL---QVASVTCGPWHTA 400

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-- 228
              S   +++ G G  G LGHG R +  +PR +E   L  L+ +  A G WH A V +  
Sbjct: 401 LVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVES--LSGLRTIAAACGVWHTAAVVEVI 458

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++
Sbjct: 459 VTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLT 518

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V++ G      LG N  ADG+         P LV   K   E V +I+     Y  
Sbjct: 519 TSGHVFAMGSTVYGQLG-NPYADGK--------LPCLVED-KLSGESVEEIAC--GAY-- 564

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 565 -HVAVLTSRNEVYTWGKGANGRLG 587



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T L++  GQ++ FG  +FG   +G +    V  P+ VESL  +  
Sbjct: 384 LEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDREN--VAYPREVESLSGLRT 441

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           + AA G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 442 IAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALI 500

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V+++G  + G+LG+    D K P L+E  +L    
Sbjct: 501 DYNFHKIACGHSLTVGLTT--SGH-VFAMGSTVYGQLGN-PYADGKLPCLVED-KLSGES 555

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 271
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G 
Sbjct: 556 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGA 615

Query: 272 DYTTFV 277
           +YT  +
Sbjct: 616 NYTAAI 621



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++R+G V+T+   +  RLGH    + ++P  L+ +L
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPR-LVESL 329

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
               V  +A G  +  A+      MA  +Y+ G G    G LGHG+      P+ I    
Sbjct: 330 AVSTVDFVACGEFHTCAVT-----MAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISG-P 383

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V  G WH A+V   G++ T+G G +G LGHG+ E  + P+ V++L+ ++ I 
Sbjct: 384 LEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIA 443

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            A G + T  V E            G ++++G G+   LGH       G++    L P  
Sbjct: 444 AACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTC 495

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V +L   N    +I+  +S+     T  LT SG ++A G+   GQLG
Sbjct: 496 VPALIDYN--FHKIACGHSL-----TVGLTTSGHVFAMGSTVYGQLG 535


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 145/328 (44%), Gaps = 43/328 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+++G++S G   +GV     V  P+L+ESL N  +   A G + 
Sbjct: 318 ACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSD--VPHPKLIESLSNTNIELVACGEYH 375

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 376 TCAVTLSGDLYT--WGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 433

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR IE   L  L+ V  A G WH A V +
Sbjct: 434 VT---SSGQLFTFGDGTFGALGHGDRKSVSLPREIE--SLKGLRTVQAACGVWHTAAVVE 488

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V  L +     VA G   T 
Sbjct: 489 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNC-QVACGHSMTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +S  G VY+ G      LG N  ADG+         P  V       E  +  S    I
Sbjct: 548 ALSRSGHVYTMGSCVYGQLG-NTQADGK--------LPIRV-------EGKLSKSFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   +++ +G G  G+LG
Sbjct: 592 ACGAYHVAVLTSRTEVFTWGKGANGRLG 619



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 163/323 (50%), Gaps = 47/323 (14%)

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
           + +GV+   L+  P+ +ES   + V   A G    A+++++G V  FSWG ++  RLGH 
Sbjct: 292 SNFGVKMDSLL--PKALESAVVLDVQNIACGGKHAALVTKQGEV--FSWGEESGGRLGHG 347

Query: 137 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGS 193
            + +DV PHP L+ +L N  +  +A G  +  A+    SG  +Y+ G G    G LGHG+
Sbjct: 348 VD-SDV-PHPKLIESLSNTNIELVACGEYHTCAVTL--SG-DLYTWGDGTYNYGLLGHGN 402

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           +     P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+
Sbjct: 403 QVSHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSL 461

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIA 301
           P+ +++L  ++ +  A G + T  V E             G ++++G G+   LGH    
Sbjct: 462 PREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH---- 517

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
              G++ +  L P  V +L + N    Q++  +S+     T AL+ SG +Y  G+   GQ
Sbjct: 518 ---GDKESK-LVPTCVVTLVEPN---CQVACGHSM-----TVALSRSGHVYTMGSCVYGQ 565

Query: 362 LGIELVNNQTERGNPERVDIDLS 384
           LG    N Q +   P RV+  LS
Sbjct: 566 LG----NTQADGKLPIRVEGKLS 584



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 21/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ +GQ++ FG  +FG   +G +  K V+ P+ +ESLK +  
Sbjct: 416 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRT 473

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           VQAA G + TA +               G+++T+  G+  RLGH  + + + P  ++  +
Sbjct: 474 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLV 533

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E  P  Q+A G+   +AL+   SG  VY++G  + G+LG+ ++ D K P  +E  +L   
Sbjct: 534 E--PNCQVACGHSMTVALS--RSGH-VYTMGSCVYGQLGN-TQADGKLPIRVEG-KLSKS 586

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+    + P +V+AL D +   +A G
Sbjct: 587 FVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACG 646

Query: 272 DYTTFVV 278
              T  +
Sbjct: 647 TNFTAAI 653



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+ VG   G K+      D   P+ +E   +L++Q +  A G  HAA+V + G V +WG 
Sbjct: 287 VHQVGSNFGVKM------DSLLPKALESAVVLDVQNI--ACGGKHAALVTKQGEVFSWGE 338

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
              G LGHG +     PK++++L++     VA G+Y T  V+  GD+Y++G G      +
Sbjct: 339 ESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGT-----Y 393

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
           N    G GN+ ++ +        K+VN  +  I +++      HT  +T SG+L+ FG G
Sbjct: 394 NYGLLGHGNQVSHWVP-------KRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDG 446

Query: 358 DKGQLG 363
             G LG
Sbjct: 447 TFGALG 452


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 145/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     +++  G+V+++G +S G   +GV     V  P+L+ESL N  +   A G + 
Sbjct: 311 ACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSD--VPHPKLIESLSNTNIELVACGEYH 368

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 369 TCAVTLSGDLYT--WGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 426

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR IE   L  L+ V  A G WH A V +
Sbjct: 427 VT---SSGQLFTFGDGTFGVLGHGDRKSVSLPREIE--SLKGLRTVQAACGVWHTAAVVE 481

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V  L++     VA G   T 
Sbjct: 482 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTV 541

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +S  G VY+ G      LG N  ADG+      + TP          E  +  S    I
Sbjct: 542 ALSRLGHVYTMGSCVYGHLG-NTQADGK------LPTPV---------EGKLSKSFVEEI 585

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   +++ +G G  G LG
Sbjct: 586 ACGAYHVAVLTSRTEVFTWGKGANGCLG 613



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ +GQ++ FG  +FG   +G +  K V+ P+ +ESLK +  
Sbjct: 409 LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSLPREIESLKGLRT 466

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           VQAA G + TA +               G+++T+  G+  RLGH  + + + P  ++ TL
Sbjct: 467 VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVV-TL 525

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +     Q+A G+   +AL+       VY++G  + G LG+ ++ D K P  +E  +L   
Sbjct: 526 DEPNFCQVACGHSMTVALS---RLGHVYTMGSCVYGHLGN-TQADGKLPTPVEG-KLSKS 580

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  GCLGHG+    + P +V+AL D +   +A G
Sbjct: 581 FVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACG 640

Query: 272 DYTTFVV 278
              T  +
Sbjct: 641 TNFTAAI 647



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 42/321 (13%)

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
           + +GV+   L+  P+ +ES   + V   A G    A+++++G V  FSWG ++  RLGH 
Sbjct: 285 SNFGVKMDSLL--PKALESAVVLDVQNIACGGEHAAMVTKQGEV--FSWGGESGGRLGHG 340

Query: 137 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
            + +DV PHP L+ +L N  +  +A G  +  A+      +  +  G    G LGHG++ 
Sbjct: 341 VD-SDV-PHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTWGDGTYNYGLLGHGNQV 397

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P+ +    L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+
Sbjct: 398 SHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPR 456

Query: 256 VVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADG 303
            +++L  ++ +  A G + T  V E             G ++++G G+   LGH      
Sbjct: 457 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH------ 510

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            G++ +  L P  V +L + N    Q++  +S+     T AL+  G +Y  G+   G LG
Sbjct: 511 -GDKESK-LVPTRVVTLDEPN--FCQVACGHSM-----TVALSRLGHVYTMGSCVYGHLG 561

Query: 364 IELVNNQTERGNPERVDIDLS 384
               N Q +   P  V+  LS
Sbjct: 562 ----NTQADGKLPTPVEGKLS 578


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 40/339 (11%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  A
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-----H 341
           FG G    LGHN+ +                    ++N R V   L  SI   A     H
Sbjct: 266 FGAGGYGQLGHNSTS-------------------HEINPRKV-FELMGSIVTQAACGRQH 305

Query: 342 TFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
           T A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  A G   T+ ++D GQVYA+G DS G+   G+QG+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L        A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V +A G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+       A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 145/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G+VY++G++S G   +GV     V  P+L+++L ++ +   A G + 
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLIDALAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WGN        GH  E +   P  L G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAV 432

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 433 VT---SAGQLFTFGDGSFGVLGHGDRQSISVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E   VP  V +L +     VA G   T 
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G      LG N  ADG        + P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMGSSVYGQLG-NPQADG--------MVPARV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQS--ISVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   + +L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVP-TCVASL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C+ +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCFTVALT---TSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 42/308 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G     +++++G VY  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVY--SWGEESGGRLGHGVDCDVPQPK-LID 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
            L ++ +  +A G  +  A+    SG  +Y+ G G    G  GHG+      P+ +    
Sbjct: 359 ALAHMNIELVACGEYHTCAVTL--SG-DLYTWGNGTFNFGLSGHGNEVSHWMPKRLNG-P 414

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  SVP+ V++L  ++ + 
Sbjct: 415 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVR 474

Query: 268 VATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            A G + T  V E             G ++++G G+   LGH       G++    L P 
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKETR-LVPT 526

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V SL + N    Q++  +       T ALT SG +Y  G+   GQLG    N Q +   
Sbjct: 527 CVASLVEPN--FCQVACGHCF-----TVALTTSGHVYTMGSSVYGQLG----NPQADGMV 575

Query: 376 PERVDIDL 383
           P RV+  L
Sbjct: 576 PARVEGKL 583



 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 8/150 (5%)

Query: 24  NGKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           +G +  LG   +E    P    SL      Q A G   T+ ++ +G VY  G   +G+  
Sbjct: 508 DGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG 567

Query: 81  YGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
              Q   +V  P  VE  L   FV + + G +  AVL+    VYT+  G + RLG H + 
Sbjct: 568 -NPQADGMV--PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG-HGDT 623

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           +D     L+  L++  V  +  G  +  A+
Sbjct: 624 DDRNSPTLVEALKDKQVRSVVCGINFTAAI 653


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 167/357 (46%), Gaps = 41/357 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +S Q + +   A G     +++  GQV+++G+++ G    G + +  V+ P++++S
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGR--LGHKTSDSVSDPKIIDS 280

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LG---HHTEPNDVEPHPLLGTLEN 153
           L +  V   A G  +T  +S  G +Y   WG     LG   +  + +   PH L+ T + 
Sbjct: 281 LASTPVKTIAFGAKYTCAVSVSGELY--EWGEGIHSLGFGKNQCQRSPWFPHKLISTSDG 338

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           I V++IA G  +   ++   S   +Y+ G G  G LGHG      HP+ +E   L   + 
Sbjct: 339 ISVLKIACGQWHTAIIS---SLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES--LRGSRA 393

Query: 214 VVVAAGAWHAAVVGQD----------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
             VA G WH A + +           G++ TWG    G LGH N++ + VP  V++L D 
Sbjct: 394 KSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC 453

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V+ G   T V++  G V++ G  E   LG+        +R  N     +   LK  
Sbjct: 454 DFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGN--------SRSDNTSICMVEGPLK-- 503

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            E V  IS  +S     H   LT +GK++ +G G +GQLG+    +  +R +P  V+
Sbjct: 504 TEFVKDISCGSS-----HVAVLTMNGKVFTWGKGTEGQLGL---GDYVDRSSPTLVE 552



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 181/375 (48%), Gaps = 49/375 (13%)

Query: 15  LRPDIINE-RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 73
           + P+++N  +N  R++   E   T    R +Q  ++ Q+      T  + D   ++ +G 
Sbjct: 151 ISPELVNRVKNNLRDIRSAE---TIKDQRIIQMPKLKQSEGSNAATDSLKD---IFVWG- 203

Query: 74  DSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--ND 130
           D  G  +++G      ++ P+L++S + + V   A G    A+++++G+V  FSWG  N 
Sbjct: 204 DVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQV--FSWGEENG 261

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            RLGH T  +  +P  ++ +L + PV  IA G  Y  A++   SG  +Y  G G+   LG
Sbjct: 262 GRLGHKTSDSVSDPK-IIDSLASTPVKTIAFGAKYTCAVSV--SG-ELYEWGEGIHS-LG 316

Query: 191 HGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
            G    ++ P    +LI     +++  + +A G WH A++   G++ T+G+G +G LGHG
Sbjct: 317 FGKNQCQRSPWFPHKLISTSDGISV--LKIACGQWHTAIISSLGKLYTYGYGTFGVLGHG 374

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSED----------GDVYSFGCGESASLG 296
           +      PK V++L   +A  VA G + T  + E           G ++++G      LG
Sbjct: 375 DTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLG 434

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
           H        N+ +  L P  V SL  ++    Q+S   S+     T  LT +G ++  G+
Sbjct: 435 HT-------NKKSK-LVPTRVESL--IDCDFTQVSCGMSL-----TAVLTITGVVFTIGS 479

Query: 357 GDKGQLGIELVNNQT 371
            + GQLG    +N +
Sbjct: 480 KEHGQLGNSRSDNTS 494



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 20/244 (8%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           GI +++ A G   T +IS  G++Y +G  +FG   +G   T  V  P+ VESL+      
Sbjct: 338 GISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHG--DTHSVVHPKEVESLRGSRAKS 395

Query: 106 AAIGNFFTA-VLSREGRVYT-------FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
            A G + TA ++   G + +       F+WG+    +LGH  + + + P   + +L +  
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVP-TRVESLIDCD 454

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             Q++ G      L    +G+ V+++G    G+LG+ SR+D     ++E    L  + V 
Sbjct: 455 FTQVSCGMSLTAVLTI--TGV-VFTIGSKEHGQLGN-SRSDNTSICMVEG--PLKTEFVK 508

Query: 216 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            ++ G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   +A     
Sbjct: 509 DISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIACSSNF 568

Query: 275 TFVV 278
           T V 
Sbjct: 569 TAVT 572


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 146/332 (43%), Gaps = 37/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L+   G+V+ +G+DS G   +G +  +    P+LVESL    V   
Sbjct: 77  LDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVESLTVSNVDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH  +     P  + G LE + V  ++ G  
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTW 194

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   +    S   +++ G G  G LGHG      +PR +E   L  L+ + VA G WH A
Sbjct: 195 HTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVES--LSGLKTIAVACGVWHTA 249

Query: 225 VVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + +              G++ TWG G    LGHG++E    P  V  L D     VA G
Sbjct: 250 AIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACG 309

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V S G         NA+    GN H++   P LV   K V E+V+QI+
Sbjct: 310 HSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED-KIVGEQVLQIA 359

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  + H   LT   +++ +G G  G+LG
Sbjct: 360 CG-----SYHVAVLTNRSEVFTWGKGANGRLG 386



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 132/251 (52%), Gaps = 21/251 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G+++   + G   T LI+  GQ++ FG  SFG   +G    K V+ P+ VESL  + 
Sbjct: 180 ALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLK 237

Query: 103 VVQAAIGNFFTA-----VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            +  A G + TA     +++R         G+++T+  G+  RLGH  +   ++P   + 
Sbjct: 238 TIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVA 296

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           TL +    ++A G+   +AL    SG  V S+G  + G+LG+   +D + P L+E  +++
Sbjct: 297 TLIDHDFYRVACGHSLTVALT--TSGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIV 351

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
             Q + +A G++H AV+     V TWG G  G LGHG+ E   VP +V+AL D    ++A
Sbjct: 352 GEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIA 411

Query: 270 TGDYTTFVVSE 280
            G   T  + +
Sbjct: 412 CGANFTAAICQ 422



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 43/291 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    A++ + G V+T  WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVKHAALVMKNGEVFT--WGEDSGGRLGHGTREDCVRPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           +L    V  +A G  +  A+         G   Y+VG      LGHG+      P+ I  
Sbjct: 125 SLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGL-----LGHGNDVGHWIPKRISG 179

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  LQ   V+ G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L+ +K 
Sbjct: 180 -ALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKT 238

Query: 266 IHVATGDYTTFVVSE-------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           I VA G + T  + E              G ++++G G+   LGH       G++    L
Sbjct: 239 IAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGH-------GDKETR-L 290

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V +L  ++    +++  +S+     T ALT SG++ + G    GQLG
Sbjct: 291 KPTCVATL--IDHDFYRVACGHSL-----TVALTTSGQVLSMGNAVYGQLG 334



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 129/313 (41%), Gaps = 32/313 (10%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P    SL    +   A G   T  ++  G++Y +G  ++     G         
Sbjct: 114 REDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWI 173

Query: 92  PQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPH 145
           P+ +  +L+ + V   + G + TA+++  G+++TF  G+   LGH      + P +VE  
Sbjct: 174 PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVE-- 231

Query: 146 PLLGTLENIPVVQIAAGYCYLLAL----------ACQPSGMAVYSVGCGLGGKLGHGSRT 195
               +L  +  + +A G  +  A+          + + S   +++ G G   +LGHG + 
Sbjct: 232 ----SLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKE 287

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P  +    L++     VA G      +   G+V + G   YG LG+ + +      
Sbjct: 288 TRLKPTCVAT--LIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCL 345

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           V   +   + + +A G Y   V++   +V+++G G +  LGH    D +         P 
Sbjct: 346 VEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRK--------VPT 397

Query: 316 LVTSLKQVNERVV 328
           LV +LK    R +
Sbjct: 398 LVEALKDRAVRYI 410


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 156/321 (48%), Gaps = 32/321 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I Q A G   T+ ++ +G+VYA G +   +  + +   +    P L+  L +  VVQ A 
Sbjct: 42  IKQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKR----PLLIPELLDYVVVQIAC 97

Query: 109 GNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G+  +  LS  G+V   SWG++   +LG  T+ + V+   ++  L +  VVQIA G  + 
Sbjct: 98  GSRHSMALSEWGQV--LSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHS 155

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPVVVAAGAWHAAV 225
           LAL    S   +YS G  + G+LG  +  +  H  + +    LL +    +A G  H+ +
Sbjct: 156 LALT---SCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFI 212

Query: 226 VGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           + +   V  +GWGR  C  LG  +E   S P  ++ L  +    VA GD  +  ++ +G 
Sbjct: 213 ISKSSAV--FGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGG 270

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V++ G G    LGH     G G   AN + P++V  L  +   + Q++  N      HT 
Sbjct: 271 VFTCGAGAYGQLGH-----GFG---ANEMLPRMVMEL--MGSTITQVACGNR-----HTL 315

Query: 344 ALTES-GKLYAFGAGDKGQLG 363
           AL  S G++Y FG G  GQLG
Sbjct: 316 ALVPSRGRVYGFGLGSSGQLG 336



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 15/265 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL    L    ++Q A G+  +M +S+ GQV ++G +  G+         +V  P++V  
Sbjct: 81  PLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQATD-QDIVQLPKIVRQ 139

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDV--EPHPL-LGTLE 152
           L +  VVQ A GN  +  L+  G +Y  SWG++   +LG +T P +V     P+ L TL 
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNT-PKEVTHSNQPVRLTTLL 196

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            IPV  IA G  +   ++      AV+  G    G+LG    T   +P  ++  + L ++
Sbjct: 197 GIPVAAIACGGNHSFIIS---KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVR 253

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              VA G   +  +  +G V T G G YG LGHG    E +P++V  L       VA G+
Sbjct: 254 --FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGN 311

Query: 273 -YTTFVVSEDGDVYSFGCGESASLG 296
            +T  +V   G VY FG G S  LG
Sbjct: 312 RHTLALVPSRGRVYGFGLGSSGQLG 336



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT- 90
           +++   P   R L    ++Q A G   ++ ++  G++Y++G + +G+   GV   K VT 
Sbjct: 128 QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVNTPKEVTH 185

Query: 91  --SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I V   A G   + ++S+   V+ +   N  +LG + E +   P   L
Sbjct: 186 SNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG   +E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFGANEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +  ++P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 16/164 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VA G  H   +   GRV   G   +  LGH  +     P ++  L D   + +A G   +
Sbjct: 45  VACGHRHTLFLTSSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHS 102

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +SE G V S+G  +   LG       Q      V  P++V  L  V++ VVQI+  N+
Sbjct: 103 MALSEWGQVLSWGDNDCGQLG-------QATDQDIVQLPKIVRQL--VSKTVVQIACGNN 153

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                H+ ALT  G+LY++G+   GQLG+      T    P R+
Sbjct: 154 -----HSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRL 192



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    +++  P++V  
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEML--PRMVME 298

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    + Q A GN  T A++   GRVY F  G+  +LG  +  +   P  ++G
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQVVIG 351


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 162/341 (47%), Gaps = 38/341 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q   G     L++  G+V+ +G++  G   +G+Q    ++ P+LVE
Sbjct: 241 TPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVE 298

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
            L    +   A G + T V+S  G +  FSWG    N   LGH ++ +   P  + G LE
Sbjct: 299 FLALTNIDFVACGEYHTCVVSTSGDL--FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLE 356

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V+ +A G  +  ALA   +   +++ G G  G LGHG+R    +P+ ++   L  L+
Sbjct: 357 GLQVLSVACG-TWHSALAT--ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQS--LNGLK 411

Query: 213 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            V VA   WH A    V+GQ G      ++ TWG G    LGHGN+E   +P  V +L D
Sbjct: 412 TVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                +A G   T  ++  G V++ G      LG N+I+DG+         P LV   + 
Sbjct: 472 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGK--------LPCLVQD-RL 521

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V E V +I+  +      H   LT   +++ +G G  G+LG
Sbjct: 522 VGEFVEEIACGDH-----HVAVLTSRSEVFTWGKGANGRLG 557



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 42/292 (14%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +ES   + V Q   G    A+++R+G V+T  WG +   RLGH  + +   P  
Sbjct: 239 VLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFT--WGEEVGGRLGHGIQVDISRPKL 296

Query: 147 L-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLI 203
           +    L NI  V     +  +++ +       ++S G G+   G LGHGS      P+ +
Sbjct: 297 VEFLALTNIDFVACGEYHTCVVSTSGD-----LFSWGDGIHNVGLLGHGSDISHWIPKRV 351

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
               L  LQ + VA G WH+A+   +G++ T+G G +G LGHGN E  S PK VQ+LN +
Sbjct: 352 SG-PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL 410

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           K + VA   + T  + E             ++++G G+   LGH       GN+   +L 
Sbjct: 411 KTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGH-------GNKETYLL- 462

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTESGKLYAFGAGDKGQLG 363
           P  V+SL   N   +            HTF  ALT SG ++  G    GQLG
Sbjct: 463 PTCVSSLIDYNFHKIAC---------GHTFTVALTTSGHVFTMGGTAHGQLG 505



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 124/242 (51%), Gaps = 18/242 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+SL  +  
Sbjct: 355 LEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKT 412

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           V+ A   + TA    V+ + G      +++T+  G+  RLGH  +   + P   + +L +
Sbjct: 413 VKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLID 471

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               +IA G+ + +AL    SG  V+++G    G+LG+ S +D K P L+ Q +L+    
Sbjct: 472 YNFHKIACGHTFTVALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGEFV 526

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H AV+     V TWG G  G LGHG+ E +  P  V+AL D     ++ G  
Sbjct: 527 EEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSN 586

Query: 274 TT 275
            T
Sbjct: 587 FT 588



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 17/279 (6%)

Query: 53  AAGAGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 109
           A G   T ++S +G ++++G    + G   +G   +  +  P+ V   L+ + V+  A G
Sbjct: 309 ACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI--PKRVSGPLEGLQVLSVACG 366

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
            + +A+ +  G+++TF  G    LGH    +   P  +  +L  +  V++A    +  A+
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQ-SLNGLKTVKVACSIWHTAAI 425

Query: 170 A-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
                      S   +++ G G   +LGHG++     P  +      N   +  A G   
Sbjct: 426 VEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKI--ACGHTF 483

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSED 281
              +   G V T G   +G LG+   + + +P +VQ  L       +A GD+   V++  
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGNSISDGK-LPCLVQDRLVGEFVEEIACGDHHVAVLTSR 542

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            +V+++G G +  LGH    D +       L  + V SL
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSL 581


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 46/348 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+++++G++S G   +GV+    V+ P+++++L    V   A G + 
Sbjct: 296 ACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYH 353

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +E +   P  + G +E I V  I+ G  +   
Sbjct: 354 TCAVTLSGDLYT--WGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAV 411

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG       PR +E   L  L+   VA G WH A   +
Sbjct: 412 VT---SAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTKVACGVWHTAAAVE 466

Query: 229 ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                            ++ TWG G  G LGHG+ E   VP+ V AL + +   VA G+ 
Sbjct: 467 AINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGND 526

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G VY+ G      LG +A A+G+         P  V   +  N  V +++  
Sbjct: 527 LTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVEG-EIANSFVEEVACG 576

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                + H   LT   ++Y +G G  GQLG     +   R  P  VD+
Sbjct: 577 -----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTIVDV 616



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 41/298 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++R+G +  FSWG ++  RLGH  E  DV    ++ 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEI--FSWGEESGGRLGHGVEA-DVSHPKIID 337

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           TL    V  +A G  +  A+        +Y+ G G    G LGHGS      P+ +   Q
Sbjct: 338 TLSGTNVELVACGEYHTCAVTLSGD---LYTWGDGTHNYGLLGHGSEVSHWIPQKVSG-Q 393

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           +  ++   ++ GAWH AVV   G++ T+G G +G LGHG+    + P+ V+ L  ++   
Sbjct: 394 MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTK 453

Query: 268 VATGDYTTFV-------VSEDG--------DVYSFGCGESASLGHNAIADGQGNRHANVL 312
           VA G + T         +S+ G         +Y++G G+   LGH    D +       L
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGH---GDNEPR-----L 505

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            P+ V +L  + ER+ Q++  N +     T ALT +G++Y  G+   GQLG    N +
Sbjct: 506 VPECVAAL--MEERICQVACGNDL-----TVALTTAGRVYTMGSTAYGQLGSATANGK 556



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 23/250 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GIR+   + GA  T +++ AGQ++ FG  SFG   +G   T     P+ VE+L+ +  
Sbjct: 394 MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRT 451

Query: 104 VQAAIGNFFTAV-------LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLL 148
            + A G + TA        LS  G        ++YT+  G+  RLGH      + P  + 
Sbjct: 452 TKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVA 511

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             +E   + Q+A G    +AL    +   VY++G    G+LG  +  + K P  +E  ++
Sbjct: 512 ALMEE-RICQVACGNDLTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EI 565

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            N     VA G++H AV+     V TWG G  G LGHG+    + P +V  L D +  +V
Sbjct: 566 ANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNV 625

Query: 269 ATGDYTTFVV 278
           A G   T V+
Sbjct: 626 ACGSKFTVVI 635



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           +G +    S+ D   P+ +E   +L++  +  A G  HA +V + G + +WG    G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           HG E   S PK++  L+      VA G+Y T  V+  GD+Y++G G      HN    G 
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           G+  ++ + PQ V+   +     +++S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 379 GSEVSHWI-PQKVSGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 36/314 (11%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I   G VY +G + F +   G      V +P+L+ES   + V     G    A++SREG+
Sbjct: 56  IESKGDVYIWG-EVFAD---GFPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGK 111

Query: 122 VYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           V+T  WG ++  RLGH  + +  +PH  L    ++  + I A   +  +   +      +
Sbjct: 112 VFT--WGEESGGRLGHGIDKDFGKPH--LVEFPDVVTLDIVACGEFHTSAVSKCDNFFTW 167

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
             G    G LGHG+      P+ +  F L  L+ V VA G+WH+A+   +G++ T+G G 
Sbjct: 168 GDGTHNVGLLGHGNEISHWIPKSVNGF-LDGLRVVSVACGSWHSALATSNGKLFTFGDGT 226

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGC 289
           +G LGHG++E    PK VQ L+ +K + VA G + T  + E             ++++G 
Sbjct: 227 FGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGD 286

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G+   LGH       GN+    L P  V+ L + N    QI+  +++     T ALT SG
Sbjct: 287 GDKFRLGH-------GNKDM-YLKPTRVSPLIEYN--FQQIACGHTM-----TVALTTSG 331

Query: 350 KLYAFGAGDKGQLG 363
            ++  G+ + GQLG
Sbjct: 332 HVFTMGSTENGQLG 345



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + +    +G     ++S  G+V+ +G++S G   +G+   K    P LVE
Sbjct: 81  TPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGID--KDFGKPHLVE 138

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
               + +   A G F T+ +S+    +T  WG    N   LGH  E +   P  + G L+
Sbjct: 139 FPDVVTLDIVACGEFHTSAVSKCDNFFT--WGDGTHNVGLLGHGNEISHWIPKSVNGFLD 196

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + VV +A G  +  ALA   S   +++ G G  G LGHG +    +P+   + QLL+ L
Sbjct: 197 GLRVVSVACG-SWHSALAT--SNGKLFTFGDGTFGVLGHGDQESVMYPK---EVQLLSGL 250

Query: 212 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + V VA G WH A    V  Q G      ++ TWG G    LGHGN++    P  V  L 
Sbjct: 251 KTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLI 310

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +     +A G   T  ++  G V++ G  E+  L         GN +A    P LV   K
Sbjct: 311 EYNFQQIACGHTMTVALTTSGHVFTMGSTENGQL---------GNPNAAGKVPTLVQD-K 360

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + E + +IS         H  A+T   +LY +G G  G+LG
Sbjct: 361 LLGEFIEEISCGAH-----HVAAVTSRSELYTWGKGSNGRLG 397



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 24/262 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G+R++  A G+  + L +  G+++ FG  +FG   +G Q +  V  P+ V+ L  +  
Sbjct: 195 LDGLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQES--VMYPKEVQLLSGLKT 252

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           V+ A G + TA +          +   +++T+  G+  RLGH  +   ++P  +   +E 
Sbjct: 253 VKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIE- 311

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               QIA G+   +AL    +   V+++G    G+LG+ +    K P L+ Q +LL    
Sbjct: 312 YNFQQIACGHTMTVALT---TSGHVFTMGSTENGQLGNPNAAG-KVPTLV-QDKLLGEFI 366

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ GA H A V     + TWG G  G LGHG+ +    P +V AL D    +++ G +
Sbjct: 367 EEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSN 426

Query: 273 YTTFV-----VSEDGDVYSFGC 289
           +T+ V     VS       FGC
Sbjct: 427 FTSCVCNQKYVSGTDQSVCFGC 448


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 13/264 (4%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS  + + G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            +VQ A G + +  LS+   V+ +      +LG   +        L+ +L  IP +Q+AA
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 162 G--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           G  + ++L L+      A++  G    G+LG     D   P L++  +   +  V +  G
Sbjct: 198 GGAHSFVLTLS-----GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCG 250

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+  V
Sbjct: 251 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310

Query: 279 SEDGDVYSFGCGESASLGHNAIAD 302
              G +YSFG G +  LG  + ++
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSN 334



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRY----VPNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKE---GGVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 38/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           I +   A G     +++  G+V+++G D+ G   + V  +  V+ P+++ESL +  V   
Sbjct: 205 IDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAI 262

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G   T  +S  G +Y   WG         G   + +   PH L G L+ I +++IA G
Sbjct: 263 AFGAKHTCAVSISGELY--EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 320

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + +   ++   S   +++ G G  G LGHG       P+ +E   L  ++   +A G WH
Sbjct: 321 HWHTAIIS---SAGQLFAYGDGTFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWH 375

Query: 223 AAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            A +             G++ TWG    G LGH +++ + VP  V+ LND     V+   
Sbjct: 376 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 435

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T V++  G V++ G  E   LG+    D          T   +       E V +IS 
Sbjct: 436 AQTIVLTITGVVFTIGSKEHGRLGNPLSED----------TSICLIEGPLKTEFVREISS 485

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +S     H   LT +GK++ +G G +GQLG+
Sbjct: 486 GSS-----HIAVLTMNGKVFTWGKGTEGQLGL 512



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 30/251 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L GI I++ A G   T +IS AGQ++A+G  +FG   +G   T  V  P+ VESLK +  
Sbjct: 309 LDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRA 366

Query: 104 VQAAIGNFFTA-VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLL 148
              A G + TA ++ R G V +       F+WG+  R  LGH  +     P  VEP    
Sbjct: 367 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP---- 422

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L +    Q++      + L    +G+ V+++G    G+LG+   +++    LIE    
Sbjct: 423 --LNDFDFAQVSCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--P 474

Query: 209 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  + V  +++G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   
Sbjct: 475 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 534

Query: 268 VATGDYTTFVV 278
           +A G   T  +
Sbjct: 535 IACGFNFTMAI 545



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 38/298 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHP 146
           V+ P+L+ +   I V   A G    A+++++G V  FSWG  N  RLGH    +  +P  
Sbjct: 193 VSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV--FSWGVDNGGRLGHKVSVSVSDPK- 249

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           ++ +L +  V  IA G  +  A++   SG  +Y  G G    G  G   +  +  P  + 
Sbjct: 250 IIESLASTRVKAIAFGAKHTCAVSI--SG-ELYEWGEGTHCLGLWGDQYQRSQWFPHKL- 305

Query: 205 QFQLLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            F  L+ +  + +A G WH A++   G++  +G G +G LGHG+    + PK V++L  V
Sbjct: 306 -FGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGV 364

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +A  +A G + T  + E           G ++++G  +   LGH   AD +       L 
Sbjct: 365 RAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGH---ADKKMK-----LV 416

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           P  V  L   +    Q+S        A T  LT +G ++  G+ + G+LG  L  + +
Sbjct: 417 PTCVEPLNDFD--FAQVSCA-----KAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTS 467


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHNLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PR+I++   LN Q ++ V+ G WH+  +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDAVAVPRVIQK---LNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G      LS  G+++++  G+D +LG  T  + V    ++  L    ++
Sbjct: 81  LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHSLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G    + +SD GQ++++G  S G  + G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDG--QLGLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P++++ L    ++Q + GN+ +  L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 AVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADEHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  +    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEESVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT+SG ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRAQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T    V    L+  L    ++
Sbjct: 81  LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +EE    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+++ G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-K 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G  + G+  T +
Sbjct: 66  LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDG--QLGLMTTEE 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEEDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ + G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G  + G+   +
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG--QLGLSDEE 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 30/345 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G   T  + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKK-- 74

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
             P+ V +L    +V  + G   T  L+ +G+V  FSWG+ A  ++G     + +     
Sbjct: 75  --PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGVSIAEDYIRVPRN 130

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQF 206
           + +L +I +VQ+A G+ + LAL+ + +   +YS G    G+LG GS +  E  PR I+  
Sbjct: 131 IKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSEKRKESAPRHIKS- 186

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  +    +AAG  H+  +   G +  WG  ++G LG  +E   S P ++++L   K I
Sbjct: 187 -LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT        
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVT-------- 297

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 370
             QI+         HT A    SG++Y+FG G  GQLGI   +N+
Sbjct: 298 --QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     GN  T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       E    +G L+   +V ++ G  + LAL  +     V+S G    G
Sbjct: 61  NDLGQLGHDKSRKKPEQ---VGALDAQIIVAVSCGEAHTLALNDKGQ---VFSWGHAAHG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           ++G     D  + PR I+   L ++Q V VA G  H+  + ++  + +WG  +YG LG G
Sbjct: 115 QIGVSIAEDYIRVPRNIK--SLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG 172

Query: 247 NEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           +E+  ES P+ +++L+ +   H+A G   +F ++  G ++ +G  +   LG N   D   
Sbjct: 173 SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS- 231

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  +++++ I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 232 -------DPALLKSLR--SQKIIYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSASHEVNPRKV 288



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +     P + +SL GI     AAG G +  ++ +G ++ +G++ FG+   G+      + 
Sbjct: 175 KRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQ--LGLNDETDRSD 232

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P L++SL++  ++    G   TA L++EG V+TF  G   +LGH++  ++V P  +   +
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            NI V QIA G  + LA    PS   +YS G G  G+LG GS +++K P +++
Sbjct: 293 GNI-VTQIACGRQHTLAFV--PSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  +II    G   T  ++  G V+ FG   +G+   G        +P+ V  
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSASHEVNPRKVFE 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q A G   T A +   GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 38/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           I +   A G     +++  G+V+++G D+ G   + V  +  V+ P+++ESL +  V   
Sbjct: 203 IDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVS--VSDPKIIESLASTRVKAI 260

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARL----GHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G   T  +S  G +Y   WG         G   + +   PH L G L+ I +++IA G
Sbjct: 261 AFGAKHTCAVSISGELY--EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 318

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + +   ++   S   +++ G G  G LGHG       P+ +E   L  ++   +A G WH
Sbjct: 319 HWHTAIIS---SAGQLFAYGDGTFGVLGHGDTLTVARPKQVES--LKGVRAKAIACGPWH 373

Query: 223 AAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            A +             G++ TWG    G LGH +++ + VP  V+ LND     V+   
Sbjct: 374 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 433

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T V++  G V++ G  E   LG+    D          T   +       E V +IS 
Sbjct: 434 AQTIVLTITGVVFTIGSKEHGRLGNPLSED----------TSICLIEGPLKTEFVREISS 483

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +S     H   LT +GK++ +G G +GQLG+
Sbjct: 484 GSS-----HIAVLTMNGKVFTWGKGTEGQLGL 510



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 30/251 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L GI I++ A G   T +IS AGQ++A+G  +FG   +G   T  V  P+ VESLK +  
Sbjct: 307 LDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG--DTLTVARPKQVESLKGVRA 364

Query: 104 VQAAIGNFFTA-VLSREGRVYT-------FSWGNDAR--LGHHTE-----PNDVEPHPLL 148
              A G + TA ++ R G V +       F+WG+  R  LGH  +     P  VEP    
Sbjct: 365 KAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEP---- 420

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L +    Q++      + L    +G+ V+++G    G+LG+   +++    LIE    
Sbjct: 421 --LNDFDFAQVSCAKAQTIVLTI--TGV-VFTIGSKEHGRLGN-PLSEDTSICLIEG--P 472

Query: 209 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  + V  +++G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL D +   
Sbjct: 473 LKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS 532

Query: 268 VATGDYTTFVV 278
           +A G   T  +
Sbjct: 533 IACGFNFTMAI 543



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 38/298 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHP 146
           V+ P+L+ +   I V   A G    A+++++G V  FSWG  N  RLGH    +  +P  
Sbjct: 191 VSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEV--FSWGVDNGGRLGHKVSVSVSDPK- 247

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           ++ +L +  V  IA G  +  A++   SG  +Y  G G    G  G   +  +  P  + 
Sbjct: 248 IIESLASTRVKAIAFGAKHTCAVSI--SG-ELYEWGEGTHCLGLWGDQYQRSQWFPHKL- 303

Query: 205 QFQLLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            F  L+ +  + +A G WH A++   G++  +G G +G LGHG+    + PK V++L  V
Sbjct: 304 -FGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGV 362

Query: 264 KAIHVATGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +A  +A G + T  + E           G ++++G  +   LGH   AD +       L 
Sbjct: 363 RAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGH---ADKKMK-----LV 414

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           P  V  L   +    Q+S        A T  LT +G ++  G+ + G+LG  L  + +
Sbjct: 415 PTCVEPLNDFD--FAQVSCA-----KAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTS 465


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 162/362 (44%), Gaps = 49/362 (13%)

Query: 39  LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           L+ ++L+   ++     A G     L++  G+++++G++S G   +GV     V  P+L+
Sbjct: 321 LFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD--VLHPKLI 378

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTL 151
           ++L N  +   A G + T  ++  G +YT  WGN A     LGH  + +   P  + G L
Sbjct: 379 DALSNTNIELVACGEYHTCAVTLSGDLYT--WGNGAYNYGLLGHGNQVSHWVPKRVNGPL 436

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L
Sbjct: 437 EGIHVSYISCGPWH---TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGL 491

Query: 212 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           + +  + G WH A V +             G++ TWG G  G LGHG++E + VP  V A
Sbjct: 492 RTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-A 550

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L +     VA G   T  ++  G VY+ G      LG N  ADG+         P  V  
Sbjct: 551 LVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLG-NPQADGK--------LPTRV-- 599

Query: 320 LKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
                E  +  S    I   A H   LT   ++Y +G G  G+LG     +  +R NP  
Sbjct: 600 -----EGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGH---GDTDDRNNPTL 651

Query: 379 VD 380
           VD
Sbjct: 652 VD 653



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 21/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  
Sbjct: 436 LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRT 493

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++A+ G + TA +               G+++T+  G+  RLGH  +   + P  +    
Sbjct: 494 MRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVE 553

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            N    Q+A G+   +AL    SG  VY++G  + G+LG+  + D K P  +E  +LL  
Sbjct: 554 HNF--CQVACGHSLTVALTT--SGH-VYAMGSPVYGQLGN-PQADGKLPTRVEG-KLLKS 606

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V AL D     +A G
Sbjct: 607 FVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACG 666

Query: 272 DYTTFVV 278
              T  +
Sbjct: 667 TNFTAAI 673



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 20/185 (10%)

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + VG GLG K+      D   P+ +E   +L++Q +  A G  HAA+V + G + +WG  
Sbjct: 308 HRVGSGLGVKI------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEE 359

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LGHG +     PK++ AL++     VA G+Y T  V+  GD+Y++G G      +N
Sbjct: 360 SGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNG-----AYN 414

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
               G GN+ ++ +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G 
Sbjct: 415 YGLLGHGNQVSHWVPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGT 467

Query: 359 KGQLG 363
            G LG
Sbjct: 468 FGALG 472


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I ++Q+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++Q A G + +  LS+   V  F WG +   +LG  T+        L+ +L  IP +Q+
Sbjct: 138 QIIQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+IIQ A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q + VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 149/328 (45%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V+ P+L+++L ++ +   A G + 
Sbjct: 116 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDALSHMNIELVACGEYH 173

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 174 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWH--- 228

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 229 TALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVE--SLKGLRTVRAACGVWHTAAVVE 286

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E + VP  V AL +     VA G   T 
Sbjct: 287 VMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTV 346

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ + P  V       E  +  +    I
Sbjct: 347 ALTTSGHVYTMG---------SAVYGQLGNTQADGMLPVRV-------EGKLHKNFVEEI 390

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGANGRLG 418



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 214 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRT 271

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 272 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVP-TCVAAL 330

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+ ++ D   P  +E     N 
Sbjct: 331 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNF 386

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ + ++ P +V+AL D +   V  G
Sbjct: 387 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCG 445



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  +  DV    L+ 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 157

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 158 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG-PLE 215

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+ E  SVP+ V++L  ++ +  A
Sbjct: 216 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 275

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 276 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKEAK-LVPTCV 327

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 328 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NTQADGMLPV 376

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 377 RVEGKL 382


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY++   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 135/266 (50%), Gaps = 17/266 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVY++G DS G  + G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG--QLGLLGSEEYIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLGHNAIAD 302
            V   G +YSFG G +  LG  + ++
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSN 334



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VYS G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYSWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEEYIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 28/333 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +             +  TF + 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ-------------HTSTF-VP 311

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
            SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTST 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  L+G  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +  V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 34/320 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           Q A G   T+ ++ +G+VYA G +     +Y   G +L T  P  +  L++  + Q A G
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSN-----DYSQLGHELPTKRPLQIPELQDYVITQIACG 94

Query: 110 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  LS  G+V  FSWG++   +LGH ++ + V+   ++  L +  VVQIA G  + L
Sbjct: 95  SRHSMALSEWGQV--FSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSL 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVV 226
           AL C      +YS G  L G+LG  S  D +      +   L   PV  +A G  H+ ++
Sbjct: 153 ALTC---CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLI 209

Query: 227 GQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            +   V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V
Sbjct: 210 SKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGV 267

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           ++ G G    LGH           +N + P++V  L  +   + Q++  N      HT A
Sbjct: 268 FTCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLA 312

Query: 345 LTES-GKLYAFGAGDKGQLG 363
           L  S G++Y FG G  GQLG
Sbjct: 313 LVPSRGRIYGFGLGSSGQLG 332



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-- 89
           +++   P   R+L    ++Q A G+  ++ ++  G++Y++G + +G+   GV     +  
Sbjct: 124 QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQL--GVSSPNDLQQ 181

Query: 90  -TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
             +P  + +L  I V   A G   + ++S+   V+ +   N  +LG + E N   P   L
Sbjct: 182 SNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-L 240

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 241 KTLRTLGVRFVACGDEFSVFLTIEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 295

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GR+  +G G  G LG  N +  ++P++V
Sbjct: 296 MGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A G  H   +   G+V   G   Y  LGH  E     P  +  L D     +A G   +
Sbjct: 41  IACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHS 98

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +SE G V+S+G  E   LGH +  D        V  P++V +L  V++ VVQI+  ++
Sbjct: 99  MALSEWGQVFSWGDNECGQLGHASDQDI-------VKLPKIVRNL--VSKTVVQIACGSN 149

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                H+ ALT  G+LY++G+   GQLG+   N+  +   P R+
Sbjct: 150 -----HSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRL 188


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 35/330 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + ++Q A G     L++  G+++ +G++S G   +GV   K V  P+LVE++ +  V   
Sbjct: 279 LDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGV--GKNVVQPRLVEAMASTTVDFV 336

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH T+ +   P  + G LE +   Q+A   C
Sbjct: 337 ACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL---QVALVTC 393

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
                A   S   +++ G G  G LGHG R +  +PR +E   L  L+ + VA G WH A
Sbjct: 394 GPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVES--LSGLRTIAVACGVWHTA 451

Query: 225 VVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            + +            G++ TWG G    LGHG+++    P  V +L +     +A G  
Sbjct: 452 AIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHS 511

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G V++ G      LG N  +DG+         P LV   K   E V +I+  
Sbjct: 512 LTVGLTTSGRVFTMGSTVYGQLG-NPQSDGK--------LPCLVED-KFAGESVEEIAC- 560

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              Y   H   LT   +++ +G G  G+LG
Sbjct: 561 -GAY---HVAVLTSKNEVFTWGKGANGRLG 586



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 144/287 (50%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V+Q A G    A+++R+G ++T+   +  RLGH    N V+P  L+  +
Sbjct: 270 PRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR-LVEAM 328

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            +  V  +A G  +  A+      MA  +Y+ G G    G LGHG+      P+ I    
Sbjct: 329 ASTTVDFVACGEFHTCAVT-----MAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-P 382

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ  +V  G WH A++   G++ T+G G +G LGHG+ E  S P+ V++L+ ++ I 
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIA 442

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 443 VACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGH-------GDKDAR-LEPTC 494

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  + +   +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 VPSL--IEDNFHRIACGHSL-----TVGLTTSGRVFTMGSTVYGQLG 534



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 22/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T LI+  GQ++ FG  +FG   +G +    V+ P+ VESL  +  
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDREN--VSYPREVESLSGLRT 440

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   +EP  +   +E
Sbjct: 441 IAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIE 500

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNL 211
           +    +IA G+   + L    SG  V+++G  + G+LG+  ++D K P L+E +F   ++
Sbjct: 501 D-NFHRIACGHSLTVGLTT--SGR-VFTMGSTVYGQLGN-PQSDGKLPCLVEDKFAGESV 555

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           + +  A GA+H AV+     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 556 EEI--ACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACG 613

Query: 272 -DYTTFV 277
            +Y++ +
Sbjct: 614 SNYSSAI 620


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ++ GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+S G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ + G + +  LS+   V  FSWG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVSCGYYHSLALSKASEV--FSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q + G   ++ +S A +V+++G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V V+ G +H+  + +   V +WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 171/373 (45%), Gaps = 53/373 (14%)

Query: 24   NGKRNLLGREVN-----GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
            N  +  LG  +N      TP    + +   II  + G   ++ +  + Q+Y++G   +G+
Sbjct: 1058 NNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQ 1117

Query: 79   AEYGVQGTKLVTSPQLVESLKNIF----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
              +GV     +T   L + +++      V+  A G   T VL + G ++TF W +  +LG
Sbjct: 1118 LGHGV-----LTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLG 1172

Query: 135  -----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
                 +   P  +E   ++G +    +  IAAG+ +  ++ C  +G  +YS G    G+L
Sbjct: 1173 LGNFKNRAVPMRIETSEIVG-IHGERITAIAAGHSH--SIMCLDNG-DIYSWGANSKGQL 1228

Query: 190  GHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
            GHG+      P+ I++   L  +P++ ++ G +H   + +   V  WG G + CLG+G+ 
Sbjct: 1229 GHGNIEKSLRPKQIDE---LKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSN 1285

Query: 249  ECESVPKVVQALNDVKAIHVATGDYTTFVV------SEDGDVYSFGCGESASLGHNAIAD 302
            + E  PK+++   + K   V  G Y T  V      S+ G+VY  G GE   LG      
Sbjct: 1286 KNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTG---- 1341

Query: 303  GQGNRHANVLT---PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
              G+          P ++ SL  +N  +V  S  +       +  +T +G LY +G G+ 
Sbjct: 1342 --GDLKTPFFDKPHPAVIPSLNSMN--IVGFSSGSEF-----SAIITNNGALYTWGYGNF 1392

Query: 360  GQLGIELVNNQTE 372
            GQ+G    N +TE
Sbjct: 1393 GQIG----NGKTE 1401



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 84/328 (25%), Positives = 158/328 (48%), Gaps = 33/328 (10%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            + +  A G     +IS  G+++ +G +S G+  +G+   K  ++P+ VE+ K+  ++  +
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092

Query: 108  IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI----PVVQIAA 161
             G   +  + +  ++Y  SWG+    +LGH      + P  L   +E+      V+ IA 
Sbjct: 1093 CGGEHSVAVDQSFQIY--SWGSSRYGQLGHGV----LTPQNLPKKIEDFTGGQKVLAIAT 1146

Query: 162  GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---VVVAA 218
            GY + + L  + SG  +++ G    G+LG G+  +   P  IE  +++ +       +AA
Sbjct: 1147 GYAHTMVL--KKSG-DLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAA 1203

Query: 219  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
            G  H+ +   +G + +WG    G LGHGN E    PK +  L     I ++ G + T  +
Sbjct: 1204 GHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI 1263

Query: 279  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            SE   VY +G GE   LG+ +        + N L+P+++     +N+++ ++     +Y 
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGS--------NKNELSPKMIEFF--INKKIEKV--VCGLYH 1311

Query: 339  NAHTFAL---TESGKLYAFGAGDKGQLG 363
             A   A    ++ G +Y  G G+ G+LG
Sbjct: 1312 TATVTAAENGSDRGNVYICGGGEHGKLG 1339



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 14/227 (6%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            + G RI   AAG   +++  D G +Y++G +S G+  +G     L   P+ ++ LK   +
Sbjct: 1193 IHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSL--RPKQIDELKGKPI 1250

Query: 104  VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            ++ + G+F T  +S    VY +  G    LG+ +  N++ P  ++    N  + ++  G 
Sbjct: 1251 IKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPK-MIEFFINKKIEKVVCGL 1309

Query: 164  CYLLALACQPSGM---AVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVV 215
             +   +    +G     VY  G G  GKLG G        D+ HP +I     +N+  V 
Sbjct: 1310 YHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNI--VG 1367

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
             ++G+  +A++  +G + TWG+G +G +G+G  E   +P  + +LND
Sbjct: 1368 FSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKI-SLND 1413



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 25/174 (14%)

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVA 269
            + V VA G  H AV+  DG + TWG    G LGHG    + +S P+ V+       I ++
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092

Query: 270  TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ-LVTSLKQVN--ER 326
             G   +  V +   +YS+G      LGH             VLTPQ L   ++     ++
Sbjct: 1093 CGGEHSVAVDQSFQIYSWGSSRYGQLGHG------------VLTPQNLPKKIEDFTGGQK 1140

Query: 327  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            V+ I+        AHT  L +SG L+ FG  D GQLG+    N   R  P R++
Sbjct: 1141 VLAIATGY-----AHTMVLKKSGDLFTFGWNDSGQLGL---GNFKNRAVPMRIE 1186



 Score = 43.1 bits (100), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 15/111 (13%)

Query: 253  VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            +P +V+  N+ KA+ VA G     V+S DG+++++G      LGH        N      
Sbjct: 1024 MPPLVK--NEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGL------NVGKYQS 1075

Query: 313  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            TP+ V + K  +  ++ IS         H+ A+ +S ++Y++G+   GQLG
Sbjct: 1076 TPRRVETFK--SSPIIMISCGGE-----HSVAVDQSFQIYSWGSSRYGQLG 1119


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 148/318 (46%), Gaps = 35/318 (11%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
           + +++  G+V+ +G+++ G    G+   K VT P+LVE+L    V   A G F T  ++ 
Sbjct: 249 SAIVTRQGEVFTWGEETGGRLGLGM--GKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 119 EGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           +G +YT+  G  N   LG+ T+ +   P  + G LE + V  +A G  +   ++   S  
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS---STG 363

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-------- 228
            +++ G G  G LGHG +    +PR ++   L  L+ + VA G WH A V +        
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDS--LTGLRTIAVACGVWHTAAVVEVIMTQSST 421

Query: 229 ---DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
               G++ TWG G    LGHG++E    P  V AL D     +A G   T  ++  G V+
Sbjct: 422 SIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVF 481

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G      L         GN HA+   P LV   K + E   +++     Y   H   L
Sbjct: 482 TVGSSVYGQL---------GNPHADGKQPCLVED-KLLGESAEEVAC--GAY---HVMVL 526

Query: 346 TESGKLYAFGAGDKGQLG 363
           T   ++Y +G G  G+LG
Sbjct: 527 TSKNEVYTWGKGANGRLG 544



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   A G   T LIS  GQ++ FG  +FG   +G + +  ++ P+ V+SL  +  
Sbjct: 341 LEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRT 398

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   +  L 
Sbjct: 399 IAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKP-TCVPALI 457

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V++VG  + G+LG+    D K P L+E  +LL   
Sbjct: 458 DYNFHKIACGHSITIGLTT--SGQ-VFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGES 512

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              VA GA+H  V+     V TWG G  G LGHG+ E    P +V++L D     +A G
Sbjct: 513 AEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 571



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 12/142 (8%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+A+V + G V TWG    G LG G  +  + P++V+AL       VA G++ T  V+ D
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G++Y++G G      HNA   G G   ++ + P+ ++ + +     +Q++      W  H
Sbjct: 308 GELYTWGDGV-----HNAGLLGNGTDVSHWM-PKRISGILE----GLQVAYVACGPW--H 355

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T  ++ +G+L+ FG G  G LG
Sbjct: 356 TALISSTGQLFTFGDGTFGVLG 377


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 34/347 (9%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L  + +    AG+  ++ I   G+++ +G +  G   +  + TK  +SP  V++L  + 
Sbjct: 40  ALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPE-TKTESSPAPVDALAGVS 98

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +VQAAIG +    +  +GR Y +      + G   E  +     L     +IP+ Q  A 
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRAL---RRDIPIPQRCAP 155

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPV-VV 216
              +  +A   +   V +       + GH     +  P     ++    ++  L+ V V+
Sbjct: 156 KLKVRQVAAGGTHSVVLT-------QDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVI 208

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A GA+H   + +DG +  WG   YG LG G+ +  S P  V+ L+D+  + +A G + + 
Sbjct: 209 AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++++G+VY++G GE   LG        G+  ++ + PQ V  L    E ++Q+S   + 
Sbjct: 269 ALTKEGEVYAWGRGEHGRLGF-------GDDKSSHMVPQKVELL--AGEDIIQVSCGGT- 318

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
               H+ ALT  G+++++G GD G+LG      +   G+P  V IDL
Sbjct: 319 ----HSVALTRDGRMFSYGRGDHGRLGY---GRKVTTGHPMEVPIDL 358



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 31/287 (10%)

Query: 26  KRNLLGR----EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG---- 77
           +R  LG     +   +P    +L G+ I+QAA G    + + D G+ YA+G + +G    
Sbjct: 72  QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGE 131

Query: 78  EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
           EAE    GT+ +    P        + V Q A G   + VL+++G V+T+        G 
Sbjct: 132 EAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTW--------GQ 183

Query: 136 HTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
              P D++    P  + G LEN+ V+ + A       LA    G+ +++ G    G+LG 
Sbjct: 184 PWPPGDIKQISTPVRVQG-LENVKVIAVGA----FHNLALTEDGI-LWAWGNNEYGQLGT 237

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G       P  +E    L+L  V +AAG WH+  + ++G V  WG G +G LG G+++  
Sbjct: 238 GDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSS 295

Query: 252 S-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             VP+ V+ L     I V+ G   +  ++ DG ++S+G G+   LG+
Sbjct: 296 HMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY 342



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 45/244 (18%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AV + G G  G+LG G   +E   R +     L +  VV  AG+ ++  +  DGR+ TWG
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69

Query: 237 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           W + G LGH  E + ES P  V AL  V  +  A G +    V + G  Y++G  E    
Sbjct: 70  WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129

Query: 296 GHNAIADGQGNR--------------------------HANVLT----------PQLVTS 319
           G  A     G R                          H+ VLT          P     
Sbjct: 130 GEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGD 189

Query: 320 LKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           +KQ++   RV  +     I   A H  ALTE G L+A+G  + GQLG     +   R  P
Sbjct: 190 IKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGDTQPRSQP 246

Query: 377 ERVD 380
            RV+
Sbjct: 247 IRVE 250


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L++SL ++ +   A G + 
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDSLAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWH--- 429

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     VA G   T 
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ L P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  + +   P   +  L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAAL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ +  + P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSRFV-PTCV 528

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 578 RVEGKL 583


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 24/335 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           T L   SL G   I  A G   T+ +++ G+V ++G  +  E + G       T P +V+
Sbjct: 62  TALAHESLNGA--IYVACGGHHTVAVTEDGEVVSWGWGN--EGQLGSGNAFDQTVPAVVK 117

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G + TAV++  G V  +  GN  +LG     + + P   + TL N  +
Sbjct: 118 ALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRT-VSTLYNEKI 176

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-- 214
            QIA G  + LAL+       +YS G G  G+LG G   +E       Q   ++ +    
Sbjct: 177 RQIACGMAHTLALSVNGE---IYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFE 233

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV-QALNDVKAIHVATGDY 273
            +A G+ H   +  D R+ +WG G  G LG G+ E    P VV +++ +++  +VA G +
Sbjct: 234 FIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGH 293

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ--VNERVVQI- 330
            T V+S++G++++ G G    LGH   AD Q       LT +   +L+   +   +VQ+ 
Sbjct: 294 HTAVLSDNGEIFTCGRGSYGQLGHGD-ADPQ-------LTLKKARALRHGCLLLHIVQLR 345

Query: 331 --SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              +  +   + HT  ++ +G+++A+GA + GQLG
Sbjct: 346 DKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLG 380



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 138/301 (45%), Gaps = 33/301 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L   R+   A G   T +++D G V  +GK + G+   G   + L+  P+ V +
Sbjct: 113 PAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLL--PRTVST 170

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDV-EPHPL-LGTLE 152
           L N  + Q A G   T  LS  G +Y++  G D +LG   H  E  DV  P  + +   E
Sbjct: 171 LYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEE 230

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
               +   + +C  +   C+     ++S G G  G+LG G       P ++ +  + NL+
Sbjct: 231 KFEFIACGSRHCMAITDDCR-----LFSWGLGADGRLGLGDSESRFSPTVVRR-SIENLR 284

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA------------L 260
              VAAG  H AV+  +G + T G G YG LGHG+ + +   K  +A            L
Sbjct: 285 ICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQL 344

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            D K I  A GD  T V+S  G+V+++G  E   LG        G   AN  +P  +TSL
Sbjct: 345 RDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTG------GTEGAN--SPVELTSL 396

Query: 321 K 321
           +
Sbjct: 397 R 397



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 31/216 (14%)

Query: 182 GCGLGGKLGHG---SRTDEKHPRLIEQF-----------QLLNLQPVVVAAGAWHAAVVG 227
           G G  G+LGHG   S+ + K  R  ++F           + LN   + VA G  H   V 
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLN-GAIYVACGGHHTVAVT 86

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           +DG V +WGWG  G LG GN   ++VP VV+AL++ +   VA G Y T VV++ G V  +
Sbjct: 87  EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCW 146

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G S  L       GQG+  +++L P+ V++L   NE++ QI+        AHT AL+ 
Sbjct: 147 GKGNSGQL-------GQGDWTSSLL-PRTVSTL--YNEKIRQIACG-----MAHTLALSV 191

Query: 348 SGKLYAFGAGDKGQLGIELVNNQT-ERGNPERVDID 382
           +G++Y++GAG  GQLG+     +T +   P++V +D
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD 227



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 32/259 (12%)

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV---------------VQIAAGYCY 165
           R     WG   RLGH    + +EP  L    +  PV               + +A G  +
Sbjct: 23  RTSLQGWGEFGRLGHGDTLSQLEPKRLRFD-KRFPVSLSFTALAHESLNGAIYVACGGHH 81

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            +A+        V S G G  G+LG G+  D+  P +++   L N +   VA G +H AV
Sbjct: 82  TVAVT---EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAV 136

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V   G V  WG G  G LG G+     +P+ V  L + K   +A G   T  +S +G++Y
Sbjct: 137 VTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIY 196

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           S+G G    LG   +   Q    A+V TPQ V   ++     +          + H  A+
Sbjct: 197 SWGAGADGQLG---VGKHQ-EETADVATPQKVRVDEEEKFEFIACG-------SRHCMAI 245

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T+  +L+++G G  G+LG+
Sbjct: 246 TDDCRLFSWGLGADGRLGL 264


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L++SL ++ +   A G + 
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDSLAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWH--- 429

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     VA G   T 
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ L P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  + +   P   +  L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAAL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ +  + P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSRFV-PTCV 528

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 578 RVEGKL 583


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L++SL ++ +   A G + 
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDSLAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWH--- 429

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     VA G   T 
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ L P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  + +   P   +  L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAAL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ +  + P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSRFV-PTCV 528

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 578 RVEGKL 583


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 42/328 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V  P+L++SL ++ +   A G + 
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDSLAHMNIELVACGEYH 374

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 375 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWH--- 429

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVE--SLKGLRTVRAACGVWHTAAVVE 487

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG+++   VP  V AL +     VA G   T 
Sbjct: 488 VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTV 547

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G VY+ G         +A+    GN  A+ L P  V       E  +  +    I
Sbjct: 548 ALTTSGHVYTMG---------SAVYGQLGNPQADGLLPVRV-------EGKLHKNFVEEI 591

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
              A H   LT   ++Y +G G  G+LG
Sbjct: 592 SCGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 415 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRAS--LSVPREVESLKGLRT 472

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  + +   P   +  L
Sbjct: 473 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP-TCVAAL 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+C  +AL    +   VY++G  + G+LG+  + D   P  +E     N 
Sbjct: 532 VEPNFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG  + ++ P +V+AL D +   V  G
Sbjct: 588 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  + +  +P  L+ 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVDCDVAQPK-LID 358

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ ++   L 
Sbjct: 359 SLAHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLE 416

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH A+V   G++ T+G G +G LGHG+    SVP+ V++L  ++ +  A
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ +  + P  V
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKDSRFV-PTCV 528

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 529 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NPQADGLLPV 577

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 578 RVEGKL 583


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 31/326 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP--QL 94
           +P     LQ + I + + G   T++++  G++Y+ G + +GE  +    ++ V+    +L
Sbjct: 27  SPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVEL 86

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHP-LLGTL 151
           V SL ++ V+QAA G+ F+ V++  G V  FSWG + +  LG      + E  P L+ +L
Sbjct: 87  VSSLSSMQVIQAAGGSEFSLVITTAGEV--FSWGRNDKGQLGRGKLSKEEERKPKLMKSL 144

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLN 210
               VVQI  G  + LAL        ++S GC   G+LG GS  +    P   +Q   L 
Sbjct: 145 AVCTVVQITCGANHCLALT---DDGRLFSWGCNKYGQLGLGSSHSFHDTP---QQIVCLR 198

Query: 211 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
             P+  +A+G  H+ ++     V  WG   +G LG  +E  +S P + ++L + K ++++
Sbjct: 199 GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYIS 258

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G+  T  ++++G V+SFG G    LGHN+          N + P+ V  L  +   + Q
Sbjct: 259 CGEDHTVALTKEGGVFSFGAGGFGQLGHNST--------QNEILPKRVMEL--MGSVISQ 308

Query: 330 ISLTNSIYWNAHTFALT-ESGKLYAF 354
           ++         HT A +  SGK+YAF
Sbjct: 309 VACGRR-----HTVAFSPSSGKMYAF 329



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 31/319 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V+ +G+ + G+   G      + SP+ V  L+ + + + + G   T +++++G++Y+   
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 128 GNDARLGHHTEPND----VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                LGH ++P      ++   L+ +L ++ V+Q A G  + L +    +   V+S G 
Sbjct: 64  NEYGELGH-SKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVIT---TAGEVFSWGR 119

Query: 184 GLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
              G+LG G  S+ +E+ P+L++   +  +  V +  GA H   +  DGR+ +WG  +YG
Sbjct: 120 NDKGQLGRGKLSKEEERKPKLMKSLAVCTV--VQITCGANHCLALTDDGRLFSWGCNKYG 177

Query: 242 CLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            LG G+       P+ +  L  +    +A+G   +F+++    V+ +G      LG N  
Sbjct: 178 QLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLN-- 235

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
            D     H     P L  SL+  N++V+ IS         HT ALT+ G +++FGAG  G
Sbjct: 236 -DEYDKSH-----PTLCKSLR--NQKVMYISCGED-----HTVALTKEGGVFSFGAGGFG 282

Query: 361 QLGIELVNNQTERGNPERV 379
           QLG     N+     P+RV
Sbjct: 283 QLGHNSTQNEIL---PKRV 298



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 23  RNGK----RNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           RN K    R  L +E    P   +SL    ++Q   GA   + ++D G+++++G + +G+
Sbjct: 119 RNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQ 178

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
              G   +    +PQ +  L+ I + Q A G   + +L+    V  F WG ++  +LG +
Sbjct: 179 LGLGSSHS-FHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAV--FGWGKNSFGQLGLN 235

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
            E +   P  L  +L N  V+ I+ G  + +AL  +     V+S G G  G+LGH S  +
Sbjct: 236 DEYDKSHP-TLCKSLRNQKVMYISCGEDHTVALTKEG---GVFSFGAGGFGQLGHNSTQN 291

Query: 197 EKHPRLIEQF 206
           E  P+ + + 
Sbjct: 292 EILPKRVMEL 301


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+S G    G+LG G   +++  P+LI+   L  +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFSWGQNKYGQLGLGIDCNKQASPQLIKS--LTGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  FSWG +   +LG   + N      L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+++G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCNK-QASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V +WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            +   ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 147/335 (43%), Gaps = 34/335 (10%)

Query: 30  LGREVNGTPLYCRSLQGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG+    T L+ + + G+  ++  AAG   T+ +   G V ++G +SFG+   G    +L
Sbjct: 199 LGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRL 258

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
             SP+ + +L  I  V A  G +    L ++G V+T+   +  +LG  T  +   P PL 
Sbjct: 259 --SPERIPTLSGITSVAA--GTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLP 314

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           G      V  + AG   LL       G  V + G    G+LG G   D   P L+ +   
Sbjct: 315 GVGGARAVASLDAGSLALL------EGGDVLAWGANNSGQLGDGDTADRSTPSLVPELSA 368

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
           +      V  GA HA  + +DG +  WG G  G LGHG  E   VP  V  L +V ++  
Sbjct: 369 VT----AVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSM-- 422

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           ATG + +    EDG V+++G      LG   + +    RH  V  P L  S++ V     
Sbjct: 423 ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTE----RHVPVRVPGL-PSVRAVAAA-- 475

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                       H+ A+   G ++ +G    GQLG
Sbjct: 476 ----------GHHSIAVAMDGTVWTWGRNAAGQLG 500



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 155/384 (40%), Gaps = 90/384 (23%)

Query: 37  TPLYCRSLQGIRI------IQAAAGAGRTMLISDAGQVYAFGKDSFGE------------ 78
           +P   R+ Q IR+      ++ AAGA  ++ ++  G V+A+G +S G+            
Sbjct: 50  SPPASRAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLS 109

Query: 79  --------------------AEYGVQGTKLV-----------------TSPQLVESLKNI 101
                                  G  GT                      PQ VE   ++
Sbjct: 110 PARLPVLEDIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDV 169

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
             V A  G+F + VL  +G V+  +WG +   +LG       + P P+ G LE   VV +
Sbjct: 170 VAVAA--GDFHSLVLKSDGTVW--AWGTNFHGQLGQGHTQTGLWPKPVPG-LEG--VVAL 222

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           AAG+ + LA+       AV S G    G+LG G+ T    P  I     +      VAAG
Sbjct: 223 AAGFDFTLAVHADG---AVSSWGANSFGQLGLGTFTQRLSPERIPTLSGIT----SVAAG 275

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            +HA  +G+DG V TWG    G LG G     +VP  +  +   +A  VA+ D  +  + 
Sbjct: 276 TYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARA--VASLDAGSLALL 333

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           E GDV ++G   S  LG    AD          TP LV  L  V   V            
Sbjct: 334 EGGDVLAWGANNSGQLGDGDTADRS--------TPSLVPELSAVTAVVGGAQ-------- 377

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H  AL + G L+A+G G  GQLG
Sbjct: 378 -HALALRKDGTLWAWGGGLAGQLG 400



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 36/357 (10%)

Query: 26   KRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTML-ISDAGQVYAFGKDSFGEAEYGVQ 84
            +R  LG       +    ++G+  I A AG G T L +   G V+A+G ++ G+   G  
Sbjct: 845  QRGQLGDGTTSARVAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTV 904

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
              +L  +P+ +E+L ++ V+  A+G      +  +G V+ +      +LG   E   + P
Sbjct: 905  EDRL--TPRRIEALSDVMVI--ALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLP 960

Query: 145  HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              + G LE   V  +AAG  +  +LA +  G A ++ G    G+LG GS    + P  + 
Sbjct: 961  ARVKG-LEG--VGSVAAGRAF--SLAVRDDGTA-WAWGANESGQLGDGSNQSRRVPHRVA 1014

Query: 205  QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV 263
              + L      V+AGA HA  +G+DG V  WG    G LG G      + P+ V  L+DV
Sbjct: 1015 SVKGLR----AVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDV 1070

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ-GNRHANVLTPQLVTSLKQ 322
            ++  VA G+  +  V+ DG  +S+G  E   LG     DG+ G R    L+P  V     
Sbjct: 1071 ES--VAAGEQFSVAVAHDGTAFSWGSNEYGQLG-----DGKTGPR----LSPAEVKIGGS 1119

Query: 323  VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                VV +       W  H  AL   G L A+G    GQLG       T R +P  +
Sbjct: 1120 KARTVVTVG-----AWGQHAVALMADGTLQAWGDNATGQLGD---GTTTRRSSPGEI 1168



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 151/331 (45%), Gaps = 45/331 (13%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLV 95
            P+  R +   R+ + AAG    +L+   G V A+G ++ G+   G    G + VT     
Sbjct: 760  PVQVRGIG--RVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVT----- 812

Query: 96   ESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE 152
              ++ +   ++ A G   + VL+ +G V+T  WG + R  LG  T    V P  + G LE
Sbjct: 813  --VRGVSCARSVASGGQHSLVLACDGTVWT--WGENQRGQLGDGTTSARVAPGRVEG-LE 867

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
             I  V +A G    LAL    +   V++ G    G++G G+  D   PR IE    +   
Sbjct: 868  GI--VAVAGGGDTSLALRSDGT---VWAWGANASGQVGDGTVEDRLTPRRIEALSDV--- 919

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             +V+A G  HA  VG+DG V  WG    G LG G E    +P  V+ L  V +  VA G 
Sbjct: 920  -MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGS--VAAGR 976

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              +  V +DG  +++G  ES  LG     DG  N+   V  P  V S+K +  R V    
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLG-----DGS-NQSRRV--PHRVASVKGL--RAVSAGA 1026

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                    H  AL E G ++A+G    GQLG
Sbjct: 1027 H-------HAMALGEDGAVWAWGDNTLGQLG 1050



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 44/346 (12%)

Query: 28   NLLGREVNGTPLYC-----RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
            N LG+  +GT  +      R  +   +   AAG   ++ ++  G  +++G + +G+   G
Sbjct: 1044 NTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDG 1103

Query: 83   VQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHT 137
              G +L  SP  V+   S     V   A G    A+++ +G +   +WG++A  +LG  T
Sbjct: 1104 KTGPRL--SPAEVKIGGSKARTVVTVGAWGQHAVALMA-DGTLQ--AWGDNATGQLGDGT 1158

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                  P  + G      V  ++ G  + LAL    +   V++ G    G+LG G+ T  
Sbjct: 1159 TTRRSSPGEIRGVTR---VTAVSTGAWHSLALRLDGT---VWAWGANGFGQLGDGTTTAR 1212

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              P  ++  + +    V +AAG +H+  V  DG V TWG+  +G LG G  E  ++P  V
Sbjct: 1213 AVPVPVQGLRDV----VAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQV 1268

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
              L  V+A  V  GD+ +  +  DG V  +G   S  LG  +  D    R+  V      
Sbjct: 1269 HKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD----RYTPV------ 1316

Query: 318  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              LK V+       LT      AHT AL + G ++ +G    GQLG
Sbjct: 1317 -RLKDVD------GLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 39/318 (12%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +   A G+  ++   + G V+A+G++S+G+   G    + V  P  V  L ++  V AA 
Sbjct: 419 VTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHV--PVRVPGLPSVRAVAAA- 475

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
               +  ++ +G V+T  WG +A  +LG  T  +   P  + G      V+ IAAG  ++
Sbjct: 476 -GHHSIAVAMDGTVWT--WGRNAAGQLGDGTTRDRARPVAVSGLTS---VLAIAAGGSHV 529

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAV 225
           LAL        V++ G    G+LG G+  D+  P      ++  L P+  VAAG + +  
Sbjct: 530 LALRSDGD---VWAWGYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMA 581

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           +  DG V TWG G  G LG G       P  V+ L+D++ I V  G      V  DG V+
Sbjct: 582 LANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSDIRNISV--GSAHALAVRGDGTVW 639

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G      LG  +  D    R A V    L T +  V+               +H+ AL
Sbjct: 640 AWGDNNEGQLGDGSWMD----RFAPVQVRNL-TGITAVSGG------------RSHSLAL 682

Query: 346 TESGKLYAFGAGDKGQLG 363
              G + A+G+   GQLG
Sbjct: 683 HADGTVRAWGSNGYGQLG 700



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 44/337 (13%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            R+   + GA  ++ +   G V+A+G + FG+   G    + V  P  V+ L+++  + A 
Sbjct: 1173 RVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVP--VQGLRDVVAIAA- 1229

Query: 108  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLENIPVVQIAAGYC 164
             G + +  +  +G V+T+ +    +LG  T  +   P   H L G      V  +  G  
Sbjct: 1230 -GGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEG------VQAVTGGDH 1282

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            + LAL    +   V   G    G+LG GSRTD   P  ++    L      V AGA H  
Sbjct: 1283 HSLALHADGT---VSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLT----EVRAGAAHTV 1335

Query: 225  VVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             +G+DG V TWG   +G LG G        VPK V  L    AI    G + +F    + 
Sbjct: 1336 ALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAI--GAGAWHSFASGPEE 1393

Query: 283  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
              +++G      LG   + D     +A    PQ +  L  +  +V+      S+      
Sbjct: 1394 GAFTWGRNSHGQLG---VGD-----NAPRAEPQRMKLLSGL--KVIAGGADTSL------ 1437

Query: 343  FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             A+T+ G L ++G+   G LG+ ++    +R +P RV
Sbjct: 1438 -AMTQEGVLMSWGSSLHGTLGLGVLG---QRASPGRV 1470



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 147/344 (42%), Gaps = 43/344 (12%)

Query: 27  RNLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           RN  G+  +GT      P+    L  +  I  AAG    + +   G V+A+G ++ G+  
Sbjct: 493 RNAAGQLGDGTTRDRARPVAVSGLTSVLAI--AAGGSHVLALRSDGDVWAWGYNALGQLG 550

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
            G  G KL  +P  V  L  I  V A  G +F+  L+ +G V+T+  G + +LG      
Sbjct: 551 DGTSGDKL--TPVRVPGLAPIQSVAA--GTYFSMALANDGTVWTWGEGFEGQLGDGGGVQ 606

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            + P  + G L +I  + + + +    ALA +  G  V++ G    G+LG GS  D   P
Sbjct: 607 RLSPVAVKG-LSDIRNISVGSAH----ALAVRGDGT-VWAWGDNNEGQLGDGSWMDRFAP 660

Query: 201 RLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
                 Q+ NL  +  V+ G  H+  +  DG V  WG   YG LG G      +P V+  
Sbjct: 661 -----VQVRNLTGITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPG 715

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L+ ++A+H   G      +  D  +  +G      LG  A   G   R      P  V  
Sbjct: 716 LSGIQALH--PGHLHVLALHADKTLRGWGYNRFGQLGLGAA--GWSAR------PVQVRG 765

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + +V ER+            AH   +   G + A+GA   GQLG
Sbjct: 766 IGRV-ERLAAG--------RAHALLVRADGSVVAWGANASGQLG 800



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 30/229 (13%)

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E +  ++IAAG  + L L   P+G AV++ G    G+LG     D    RL    +L  L
Sbjct: 64  EPLSPMRIAAGAQHSLFL--TPTG-AVWAWGGNSAGQLGG---ADTSFQRL-SPARLPVL 116

Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           + +V V +G  H+  +G DG V TWG    G LG G     + P+ V+   DV  + VA 
Sbjct: 117 EDIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDV--VAVAA 174

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           GD+ + V+  DG V+++G      LG      G        L P+ V  L+ V       
Sbjct: 175 GDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTG--------LWPKPVPGLEGVVALAAGF 226

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             T          A+   G + ++GA   GQLG+      T+R +PER+
Sbjct: 227 DFT---------LAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERI 263


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 34/347 (9%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L  + +    AG+  ++ I   G+++ +G +  G   +  + TK  +SP  V++L  + 
Sbjct: 40  ALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPE-TKTESSPAPVDALAGVS 98

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +VQAAIG +    +  +GR Y +      + G   E  +     L     +IP+ Q  A 
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALR---RDIPIPQGCAP 155

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPV-VV 216
              +  +A   +   V +       + GH     +  P     ++    ++  L+ V V+
Sbjct: 156 KLKVRQVAAGGTHSVVLT-------QDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVI 208

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A GA+H   + +DG +  WG   YG LG G+ +  S P  V+ L+D+  + +A G + + 
Sbjct: 209 AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++++G+VY++G GE   LG        G+  ++ + PQ V  L    E ++Q+S   + 
Sbjct: 269 ALTKEGEVYAWGRGEHGRLGF-------GDDKSSHMVPQKVELL--AGEDIIQVSCGGT- 318

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
               H+ ALT  G+++++G GD G+LG      +   G+P  V IDL
Sbjct: 319 ----HSVALTRDGRMFSYGRGDHGRLGY---GRKVTTGHPMEVPIDL 358



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 31/287 (10%)

Query: 26  KRNLLGR----EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG---- 77
           +R  LG     +   +P    +L G+ I+QAA G    + + D G+ YA+G + +G    
Sbjct: 72  QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGE 131

Query: 78  EAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
           EAE    GT+ +    P        + V Q A G   + VL+++G V+T+        G 
Sbjct: 132 EAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTW--------GQ 183

Query: 136 HTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
              P D++    P  + G LEN+ V+ + A       LA    G+ +++ G    G+LG 
Sbjct: 184 PWPPGDIKQISTPVRVQG-LENVKVIAVGA----FHNLALTEDGI-LWAWGNNEYGQLGT 237

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G       P  +E    L+L  V +AAG WH+  + ++G V  WG G +G LG G+++  
Sbjct: 238 GDTQPRSQPIRVEGLSDLSL--VDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSS 295

Query: 252 S-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             VP+ V+ L     I V+ G   +  ++ DG ++S+G G+   LG+
Sbjct: 296 HMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGY 342



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 100/244 (40%), Gaps = 45/244 (18%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AV + G G  G+LG G   +E   R +     L +  VV  AG+ ++  +  DGR+ TWG
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVV--AGSRNSLAICADGRLFTWG 69

Query: 237 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           W + G LGH  E + ES P  V AL  V  +  A G +    V + G  Y++G  E    
Sbjct: 70  WNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129

Query: 296 GHNAIADGQGNR--------------------------HANVLT----------PQLVTS 319
           G  A     G R                          H+ VLT          P     
Sbjct: 130 GEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGD 189

Query: 320 LKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           +KQ++   RV  +     I   A H  ALTE G L+A+G  + GQLG     +   R  P
Sbjct: 190 IKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TGDTQPRSQP 246

Query: 377 ERVD 380
            RV+
Sbjct: 247 IRVE 250


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 29/332 (8%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           Q   +++   G   T+ ++  G++YA G +  G+  + +  T     PQ + SL+N  + 
Sbjct: 34  QADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLD-TLPNKRPQRLTSLENYIIT 92

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAA 161
             + G   +  L+  G+V  FSWG++A  +LGH  E N  +P P ++  +    VVQIA+
Sbjct: 93  CISCGTAHSLALTNWGQV--FSWGSNAVGQLGHDAE-NGRQPTPRMIKAIGAKHVVQIAS 149

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGA 220
           G  + LAL    +   +Y+ G    G+LG G+ +++   P LI+   L  +    +A G 
Sbjct: 150 GQYHCLALT---NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQS--LAGVPIAFIACGG 204

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            H+  V + G +  WG   +G LG  +      P  ++ L  +   +++ GD  +  ++ 
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTN 264

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           +G V++ G G    LGH +         +N + P+ V  L  +  ++ QI+         
Sbjct: 265 EGGVFTCGAGTFGQLGHGSC--------SNEIVPRKVFEL--MGSKITQIACGRR----- 309

Query: 341 HTFALTES-GKLYAFGAGDKGQLGIELVNNQT 371
           HT A   S GK+Y FG G  GQLGI +V N +
Sbjct: 310 HTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHS 341



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 22/298 (7%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G  + GE   G    + V  P+ ++  +   VV+   G   T  L++EG++Y    
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  +    +    L +LEN  +  I+ G  + LAL    +   V+S G    G
Sbjct: 63  NDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALT---NWGQVFSWGSNAVG 119

Query: 188 KLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LGH +    +  PR+I+     ++  V +A+G +H   +  +G +  WG   YG LG G
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHV--VQIASGQYHCLALTNNGELYAWGSNSYGQLGIG 177

Query: 247 -NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
              E   +P ++Q+L  V    +A G   +F VS+ G ++ +G      LG N +     
Sbjct: 178 TTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL----- 232

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               +   P  + +L+ +  R +      S++       LT  G ++  GAG  GQLG
Sbjct: 233 ---NSRCYPTQLRTLRSLGVRYISCGDDFSVF-------LTNEGGVFTCGAGTFGQLG 280



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +++    ++Q A+G    + +++ G++YA+G +S+G+   G    K V  P L++
Sbjct: 132 TPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQ 190

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  + +   A G   +  +S+ G +  F WG +   +LG +   +   P   L TL ++
Sbjct: 191 SLAGVPIAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSL 247

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  I+ G  + + L  +     V++ G G  G+LGHGS ++E  PR +  F+L+  +  
Sbjct: 248 GVRYISCGDDFSVFLTNEG---GVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKIT 302

Query: 215 VVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            +A G  H  A V   G++  +G G  G LG G     S P++V+
Sbjct: 303 QIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 347


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 154/328 (46%), Gaps = 40/328 (12%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           + A G     L++  G+V+ +G++S G   +G+      + P LVE L    V   A G 
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND--FSRPHLVEFLAVNNVDFVACGE 325

Query: 111 FFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           + T  +S  G ++T  WG    N   LGH TE +   P  + G LE + V+ +A G  + 
Sbjct: 326 YHTCAVSTSGDLFT--WGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACG-TWH 382

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAA- 224
            ALA   S   +++ G G  G LGHG R    +PR   + Q+L+ L+ + VA G WH A 
Sbjct: 383 SALAT--SNGKLFTFGDGTFGVLGHGDRESVPYPR---EVQILSGLKTIKVACGVWHTAA 437

Query: 225 ---VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
              V+ Q G      ++ TWG G    LGHG++E   +P  V AL D     +A G   T
Sbjct: 438 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 497

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             ++  G V++ G      LG N ++DG+         P LV   K V E V +IS    
Sbjct: 498 VALTTSGHVFTMGGTAYGQLG-NPLSDGR--------LPCLVQD-KLVGEFVEEISCG-- 545

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                H   LT   +++ +G G  G+LG
Sbjct: 546 ---AYHVAVLTSRSEVFTWGRGANGRLG 570



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)

Query: 92  PQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 148
           P  +ESL +++V  + A G    A+++R+G V+T  WG ++  RLGH  + +   PH L+
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFT--WGEESGGRLGHGIDNDFSRPH-LV 310

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L    V  +A G  +  A++     +  +  G    G LGHG+      P+ +    L
Sbjct: 311 EFLAVNNVDFVACGEYHTCAVSTS-GDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSG-PL 368

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             LQ + VA G WH+A+   +G++ T+G G +G LGHG+ E    P+ VQ L+ +K I V
Sbjct: 369 EGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKV 428

Query: 269 ATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           A G + T     V+S+ G       ++++G G+   LGH +            L P  V+
Sbjct: 429 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGS--------KETYLLPTCVS 480

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
           +L   N    Q++  +++     T ALT SG ++  G    GQLG  L +
Sbjct: 481 ALIDYN--FHQLACGHTM-----TVALTTSGHVFTMGGTAYGQLGNPLSD 523



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 18/242 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G + +  V  P+ V+ L  +  
Sbjct: 368 LEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRES--VPYPREVQILSGLKT 425

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + TA    V+S+ G      +++T+  G+  RLGH ++   + P   +  L +
Sbjct: 426 IKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLP-TCVSALID 484

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G+   +AL    SG  V+++G    G+LG+   +D + P L+ Q +L+    
Sbjct: 485 YNFHQLACGHTMTVALTT--SGH-VFTMGGTAYGQLGN-PLSDGRLPCLV-QDKLVGEFV 539

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ GA+H AV+     V TWG G  G LGHG+ E    P  V+AL D     ++ G  
Sbjct: 540 EEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSN 599

Query: 274 TT 275
            T
Sbjct: 600 FT 601



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 31/290 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE-SLKNIFVVQAAIGN 110
           A G   T  +S +G ++ +G  +      G  GT++    P+ V   L+ + V+  A G 
Sbjct: 322 ACGEYHTCAVSTSGDLFTWGDGTHNAGLLG-HGTEVSHWIPKRVSGPLEGLQVLSVACGT 380

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLAL 169
           + +A+ +  G+++TF  G    LGH     +  P+P  +  L  +  +++A G  +  A+
Sbjct: 381 WHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACGVWHTAAI 438

Query: 170 -------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
                      S   +++ G G   +LGHGS+     P  +      N   +  A G   
Sbjct: 439 IEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQL--ACGHTM 496

Query: 223 AAVVGQDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
              +   G V T G   YG LG+    G   C    K+V    +     ++ G Y   V+
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVE----EISCGAYHVAVL 552

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           +   +V+++G G +  LGH    D +        +P  V +LK  N + +
Sbjct: 553 TSRSEVFTWGRGANGRLGHGDTEDRR--------SPTFVEALKDRNVKSI 594


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 30/345 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G   T  + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKK-- 74

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
             P+ V +L    +V  + G   T  L+ +G+V  FSWG+ A  ++G     + +     
Sbjct: 75  --PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAAHGQIGVSIAEDYIRVPRN 130

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQF 206
           + +L +I +VQ+A G+ + LAL+ + +   +YS G    G+LG GS +  E  PR I+  
Sbjct: 131 IKSLSDIQIVQVACGHHHSLALSKESN---IYSWGQNQYGQLGLGSEKRKESAPRHIKS- 186

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  +    +AAG  H+  +   G +  WG  ++G LG  +E   S P ++++L   K I
Sbjct: 187 -LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT        
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVT-------- 297

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 370
             QI+         HT A    SG++Y+FG G  GQLGI   +N+
Sbjct: 298 --QIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLGIGSTSNK 335



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 148/314 (47%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     GN  T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       E    +G L+   +V ++ G  + LAL        V+S G    G
Sbjct: 61  NDLGQLGHDKSRKKPEQ---VGALDAQIIVAVSCGEAHTLALN---DKGQVFSWGHAAHG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           ++G     D  + PR I+   L ++Q V VA G  H+  + ++  + +WG  +YG LG G
Sbjct: 115 QIGVSIAEDYIRVPRNIK--SLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG 172

Query: 247 NEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           +E+  ES P+ +++L+ +   H+A G   +F ++  G ++ +G  +   LG N   D   
Sbjct: 173 SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD 232

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  +++++ I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 233 --------PALLKSLR--SQKIIYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSASHEVNPRKV 288



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 5/173 (2%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +     P + +SL GI     AAG G +  ++ +G ++ +G++ FG+   G+      + 
Sbjct: 175 KRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQ--LGLNDETDRSD 232

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P L++SL++  ++    G   TA L++EG V+TF  G   +LGH++  ++V P  +   +
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            NI V QIA G  + LA    PS   +YS G G  G+LG GS +++K P +++
Sbjct: 293 GNI-VTQIACGRQHTLAFV--PSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  +II    G   T  ++  G V+ FG   +G+   G        +P+ V  
Sbjct: 233 PALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSASHEVNPRKVFE 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q A G   T A +   GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 32/319 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++  G+VYA G +   +  + +   +    P L+  L++  ++Q + G+
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKR----PLLIPELQDYVIIQISCGS 99

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  LS  G+V   SWG++   +LGH T+   ++   ++  L +  VVQIA G  + LA
Sbjct: 100 RHSLALSDWGQV--LSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG  S  D  H    +    LL +    +A G  H+ ++ 
Sbjct: 158 LT---SCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + G V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V+
Sbjct: 215 KSGAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 272

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH           +N + P++V  L  +   + Q++  N      HT AL
Sbjct: 273 TCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTITQVACGNR-----HTLAL 317

Query: 346 TES-GKLYAFGAGDKGQLG 363
             S G++YAFG G  GQLG
Sbjct: 318 VPSRGRVYAFGLGSSGQLG 336



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 27/288 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL    LQ   IIQ + G+  ++ +SD GQV ++G +  G+  +     +++  P++V  
Sbjct: 81  PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATD-KEIMQLPKVVRQ 139

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVE--PHPL-LGTLE 152
           L +  VVQ A GN  +  L+  G +Y  SWG++   +LG ++ P D+    +PL L TL 
Sbjct: 140 LVSKTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVNS-PKDLTHCNYPLRLTTLL 196

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP+  IA G  + +L++     SG AV+  G    G+LG    T+  +P  ++  + L 
Sbjct: 197 GIPLAAIACGGNHSFLIS----KSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           ++   VA G   +  +  +G V T G G YG LGHG    E +P++V  L       VA 
Sbjct: 252 VR--FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVAC 309

Query: 271 GD-YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           G+ +T  +V   G VY+FG G S  LG  +          +++ PQ+V
Sbjct: 310 GNRHTLALVPSRGRVYAFGLGSSGQLGTRST--------KSLMLPQVV 349



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+   P   R L    ++Q A G   ++ ++  G++Y++G + +G+   GV   K +T 
Sbjct: 128 KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVNSPKDLTH 185

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I +   A G   + ++S+ G V+ +   N  +LG + E N   P   L
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQ-L 244

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 299

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GRV  +G G  G LG  + +   +P+VV
Sbjct: 300 MGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 20/208 (9%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           SG  +Y  G    G+LG G   DE+   P  I       ++ V  A G  H   +  +G+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQV--ACGHRHTLFLTANGK 60

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   +  LGH  +     P ++  L D   I ++ G   +  +S+ G V S+G  +
Sbjct: 61  VYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH             +  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 119 CGQLGH-------ATDKEIMQLPKVVRQL--VSKTVVQIACGNN-----HSLALTSCGEL 164

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG+    + T    P R+
Sbjct: 165 YSWGSNIYGQLGVNSPKDLTHCNYPLRL 192



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 232 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 291

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GRVY F  G+  +LG  +  + + P  +
Sbjct: 292 L--PRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349

Query: 148 LG 149
           +G
Sbjct: 350 IG 351


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L  +G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  +V +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    V  G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT++G ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  +V  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA        ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            AG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 TAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V++++G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    I+  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+ AG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVTAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ ++G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q  AG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 147/335 (43%), Gaps = 49/335 (14%)

Query: 50  IQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +QA A G     L++  G+V+++G++  G   +GV     V+ P+ V+ LKN  V   A 
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNFNVELVAC 330

Query: 109 GNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           G + +  ++  G +Y   WG +A     LG  +E     P  L G LE I V  ++ G  
Sbjct: 331 GEYLSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPW 388

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   +    S   +++ G G  G LGHG R+    PR +E   L  L+ + VA G WH A
Sbjct: 389 HTAVVT---SAGQLFTFGDGTFGVLGHGDRSSVSTPREVES--LKGLRTMRVACGVWHTA 443

Query: 225 VVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V +             G++ TWG G  G LGHG++E   VP  V  L +     VA G 
Sbjct: 444 AVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGH 503

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G VY+ G      LG N  ADG+                  V  RV    +
Sbjct: 504 SLTVALTTSGQVYTMGSPVYGQLG-NPQADGK------------------VPTRVEGKLM 544

Query: 333 TNSIYWNA----HTFALTESGKLYAFGAGDKGQLG 363
            N +   A    H   LT   ++Y +G G  G+LG
Sbjct: 545 KNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 579



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G + +  V++P+ VESLK +  
Sbjct: 375 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSS--VSTPREVESLKGLRT 432

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + TA +               G+++T+  G+  RLGH  +   + P   + TL
Sbjct: 433 MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVP-TYVATL 491

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    SG  VY++G  + G+LG+  + D K P  +E   + N 
Sbjct: 492 VEPSFCQVACGHSLTVALTT--SGQ-VYTMGSPVYGQLGN-PQADGKVPTRVEGKLMKNF 547

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +  G
Sbjct: 548 VEEL-ACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICG 606

Query: 272 DYTTFVV 278
              T  +
Sbjct: 607 TSFTAAI 613



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 38/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + +DV     + 
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD-SDVSHPKFVD 318

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L+N  V  +A G  YL         + ++       G LG GS   +  PR +    L 
Sbjct: 319 GLKNFNVELVACGE-YLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSG-PLE 376

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    V+ G WH AVV   G++ T+G G +G LGHG+    S P+ V++L  ++ + VA
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVA 436

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++ A  L P  V
Sbjct: 437 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPTYV 488

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L  V     Q++  +S+     T ALT SG++Y  G+   GQLG    N Q +   P 
Sbjct: 489 ATL--VEPSFCQVACGHSL-----TVALTTSGQVYTMGSPVYGQLG----NPQADGKVPT 537

Query: 378 RVDIDL 383
           RV+  L
Sbjct: 538 RVEGKL 543


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS  + + G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS--DGQLGLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRY----VPNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 26/328 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C  +    + + A G   ++ + + G+VY  G ++ G+  +  +G K    P+ + +
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  ++  A G   +  LS  G+++++  G+D +LG  T  + V    L+  L    ++
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTIL 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LALA   +    ++ G    G+LG G     +  P+ +   + + L  V  
Sbjct: 141 QVSCGNWHCLALA---ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K ++++ G+  T 
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V++++G V++FG G    LGH+++ D    R            L+ +   V QI+     
Sbjct: 256 VLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
               HT A    SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 30/315 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S G+         +V  PQ+   + +  V + A G   +  L   G VYT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGL 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LGH  E N  E    +G L +  ++ +A G  + LAL+ +     ++S G G  G
Sbjct: 61  NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           +LG  +  D    PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG 
Sbjct: 115 QLGLTTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G E   ++ P+ V++L  +    VA G   +F +S  G V+ +G   +  LG +   D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  +L  Q          +VV IS         HT  LT++G ++ FGAG  GQLG 
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 365 ELVNNQTERGNPERV 379
           + +N++    NP RV
Sbjct: 277 DSMNDEV---NPRRV 288



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
           LG E  G  P    +L    II  A G   ++ +SD GQ++++G  S G+   G+  T+ 
Sbjct: 66  LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLTTTED 123

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
            V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P  
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236

Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           +LL  Q VV ++ G  H AV+ ++G V T+G G  G LGH +   E  P+ V  L   + 
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
             +A G  +T   V   G +Y+FGCG    LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 157/327 (48%), Gaps = 30/327 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I Q A G   T+ ++  GQVY+ G +  G+        +L    QL+  +  +   +AA 
Sbjct: 36  IEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRL----QLISGIDPLAFRKAAC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G+  T V++  G++  FSWG++   +LG       +    ++ TL    +VQIA G  + 
Sbjct: 92  GSSHTLVVNEWGQL--FSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHS 149

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
           +AL    +   +Y+ G    G+LG GS T  E  P+L+     + +    VA G +H  V
Sbjct: 150 IALT---NNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPI--AFVACGGYHTIV 204

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + + G V  WG   +G LG  + +  +VP  ++ L + +  + A G+  +  ++ DG V+
Sbjct: 205 ISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVF 264

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH       GN+ + +L  Q+   ++ +   V QIS         HT AL
Sbjct: 265 TCGAGMYGQLGH-------GNKTSEILPRQI---MELMGSTVTQISCGRR-----HTLAL 309

Query: 346 TES-GKLYAFGAGDKGQLGIELVNNQT 371
             S G++YA+G G  GQLG  +  N T
Sbjct: 310 VPSRGRVYAWGLGGAGQLGNRIAQNST 336



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 12/223 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L    I+Q A G   ++ +++ G++YA+G +S G+   G   TK+   P+LV S
Sbjct: 128 PRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLG-SDTKMELKPKLVHS 186

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  + +   A G + T V+S+ G V  F+WG +   +LG     N   P  L  TL N  
Sbjct: 187 LAAVPIAFVACGGYHTIVISKSGAV--FAWGRNTFGQLGLSDIQNRNVPCQL-RTLRNSR 243

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V   A G  + + L        V++ G G+ G+LGHG++T E  PR I   +L+      
Sbjct: 244 VCYAACGEEFSVFLTMDG---GVFTCGAGMYGQLGHGNKTSEILPRQI--MELMGSTVTQ 298

Query: 216 VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           ++ G  H  A+V   GRV  WG G  G LG+   +  + P+VV
Sbjct: 299 ISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+L+  R+  AA G   ++ ++  G V+  G   +G+  +G + ++++  P+ +  
Sbjct: 233 PCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL--PRQIME 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q + G   T A++   GRVY +  G   +LG+    N   P  + G
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFG 343


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY++   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVY++G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VYS G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYSWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEEYIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 38/338 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q   G+    L +  G+V+ +G++  G   +G      ++ P+LVESL    V   
Sbjct: 256 LDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVESLSVTIVDFI 313

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           + G F T  +S  G +  F+WG+ +     LG+ T  +   P  + G LE + V+ +A G
Sbjct: 314 SCGEFHTCAISASGDL--FNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACG 371

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   +    S   +Y+ G G  G LGHG+R    +P+ +E   L   + V VA G WH
Sbjct: 372 SWHSALIT---STGRLYTFGDGKFGALGHGNRESAAYPKEVEA--LNGFRTVKVACGVWH 426

Query: 223 AAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A + +            ++ TWG G    LG G++E   +P  +QAL +     +  G 
Sbjct: 427 SAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQ 486

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G VY+ G  ++  LG N  +DG+         P LV   K  NE V +IS 
Sbjct: 487 NMTVALATSGHVYTMGSSDNGQLG-NPKSDGK--------HPCLVKD-KLANELVEEISC 536

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                  AH   LT   ++Y +G G  G+LG   +N++
Sbjct: 537 G-----AAHVAVLTSRSEVYTWGLGANGRLGHGDLNDK 569



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 32/284 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V Q   G+   A+ +R+G V+T  WG +   RLGH T+  D+    L+ 
Sbjct: 247 PKPLESDVVLDVNQIVCGSRHVALTTRQGEVFT--WGEELGGRLGHGTD-TDISRPKLVE 303

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L    V  I+ G  +  A++     +  +  G    G LG+ +      P+ +    L 
Sbjct: 304 SLSVTIVDFISCGEFHTCAISAS-GDLFNWGDGSYRAGLLGYDTGASHWLPKRVSG-PLE 361

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            LQ + VA G+WH+A++   GR+ T+G G++G LGHGN E  + PK V+ALN  + + VA
Sbjct: 362 GLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVA 421

Query: 270 TGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
            G + +  + E             +Y++G G+   L       GQG++ A  L P  + +
Sbjct: 422 CGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRL-------GQGDKEAR-LIPTCLQA 473

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           L + N    Q+    ++     T AL  SG +Y  G+ D GQLG
Sbjct: 474 LLEHN--FHQLGCGQNM-----TVALATSGHVYTMGSSDNGQLG 510



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)

Query: 16  RPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 75
           R  ++    G  + L + V+G       L+G++++  A G+  + LI+  G++Y FG   
Sbjct: 338 RAGLLGYDTGASHWLPKRVSGP------LEGLQVLSVACGSWHSALITSTGRLYTFGDGK 391

Query: 76  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR----------EGRVYTF 125
           FG   +G + +     P+ VE+L     V+ A G + +A +              ++YT+
Sbjct: 392 FGALGHGNRES--AAYPKEVEALNGFRTVKVACGVWHSAAIVEASVQTGMNVVSKKLYTW 449

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
             G+  RLG   +   + P  L   LE+    Q+  G    +ALA   SG  VY++G   
Sbjct: 450 GDGDKNRLGQGDKEARLIPTCLQALLEH-NFHQLGCGQNMTVALAT--SGH-VYTMGSSD 505

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
            G+LG+  ++D KHP L++  +L N     ++ GA H AV+     V TWG G  G LGH
Sbjct: 506 NGQLGN-PKSDGKHPCLVKD-KLANELVEEISCGAAHVAVLTSRSEVYTWGLGANGRLGH 563

Query: 246 GNEECESVPKVVQALNDVKAIHVATG-DYTTFV 277
           G+   +  P +V+AL D     ++ G ++TT +
Sbjct: 564 GDLNDKKTPTIVEALKDRHVKSISCGSNFTTCI 596



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 19/292 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 96
           P    SL    +   + G   T  IS +G ++ +G  S+     G         P+ V  
Sbjct: 299 PKLVESLSVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSG 358

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+ + V+  A G++ +A+++  GR+YTF  G    LGH    +   P  +   L     
Sbjct: 359 PLEGLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEA-LNGFRT 417

Query: 157 VQIAAGYCYLLAL--ACQPSGMAV-----YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           V++A G  +  A+  A   +GM V     Y+ G G   +LG G +     P  ++     
Sbjct: 418 VKVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEH 477

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N   +    G      +   G V T G    G LG+   + +    V   L +     ++
Sbjct: 478 NFHQL--GCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEIS 535

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            G     V++   +VY++G G +  LGH  + D +        TP +V +LK
Sbjct: 536 CGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKK--------TPTIVEALK 579


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 32/321 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            I Q A G   T++I+  G++Y+ G + +G+  +     +L    QL+  L      +AA
Sbjct: 62  EIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFKKAA 117

Query: 108 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYC 164
            G + T  ++  G++  FSWG++   +LG +++ N +E  P ++ TL    VVQIA G  
Sbjct: 118 CGAYHTLAINEWGQL--FSWGSNTEGQLGLNSK-NFMESSPRMVKTLGTSVVVQIACGMK 174

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           +  AL    +   +YS G    G+LG G+    E  P+ I  F  + +    +A G +H+
Sbjct: 175 HAFALT---NNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAF--IGIPIAFIACGGYHS 229

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             + + G V  WG   +G LG  + +  ++P  +Q L + K  + A G+  +  ++ DG 
Sbjct: 230 IAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGG 289

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V++ G G    LGH +        ++N + P+ V  L  +   V QIS         HT 
Sbjct: 290 VFTCGAGMYGQLGHGS--------NSNEILPRQVMEL--MGSTVTQISCGKR-----HTL 334

Query: 344 ALTES-GKLYAFGAGDKGQLG 363
           AL  S G++YA+G G  GQLG
Sbjct: 335 ALVPSRGRVYAWGLGGAGQLG 355



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 19/270 (7%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIG 109
           +AA GA  T+ I++ GQ++++G ++  E + G+     + +SP++V++L    VVQ A G
Sbjct: 115 KAACGAYHTLAINEWGQLFSWGSNT--EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLA 168
                 L+  G +Y++   ++ +LG  T+   +++P   +     IP+  IA G  +  +
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPK-FISAFIGIPIAFIACGGYH--S 229

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +A   SG AV+  G    G+LG     D   P  ++  Q  N +    A G   +  +  
Sbjct: 230 IAISKSG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQ--NAKICYAACGEEFSVFLTV 286

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSF 287
           DG V T G G YG LGHG+   E +P+ V  L       ++ G  +T  +V   G VY++
Sbjct: 287 DGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAW 346

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLV 317
           G G +  LG+++          +V TPQ+V
Sbjct: 347 GLGGAGQLGNHST--------RSVTTPQVV 368



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 18/231 (7%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           +  +P   ++L    ++Q A G      +++ G++Y++G +S G+   G    K    P+
Sbjct: 151 MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTD-IKYEIKPK 209

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL---L 148
            + +   I +   A G + +  +S+ G V  F WG +   +LG     ND +   L   L
Sbjct: 210 FISAFIGIPIAFIACGGYHSIAISKSGAV--FGWGKNTFGQLG----LNDTQDRNLPCQL 263

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL+N  +   A G  + + L        V++ G G+ G+LGHGS ++E  PR +   +L
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDG---GVFTCGAGMYGQLGHGSNSNEILPRQV--MEL 318

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           +      ++ G  H  A+V   GRV  WG G  G LG+ +    + P+VV 
Sbjct: 319 MGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH 369



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           ++  G  + G+LG G   DE    PR ++  +   +Q +  A G  +  V+ Q G + + 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQI--ACGENYTVVITQIGEIYSC 85

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G   YG LGH  E+     +++  L+       A G Y T  ++E G ++S+G      L
Sbjct: 86  GNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G N+       ++    +P++V +L      VVQI+         H FALT +G+LY++G
Sbjct: 144 GLNS-------KNFMESSPRMVKTLG--TSVVVQIACGMK-----HAFALTNNGELYSWG 189

Query: 356 AGDKGQLGI 364
           +  +GQLG+
Sbjct: 190 SNSEGQLGL 198



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           + QIA G  Y + +        +YS G    G+LGH      K  +LI        +   
Sbjct: 63  IQQIACGENYTVVIT---QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKA- 116

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYT 274
            A GA+H   + + G++ +WG    G LG  ++   ES P++V+ L     + +A G   
Sbjct: 117 -ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKH 175

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            F ++ +G++YS+G      LG        G      + P+ +++        + I +  
Sbjct: 176 AFALTNNGELYSWGSNSEGQLG-------LGTDIKYEIKPKFISAF-------IGIPIAF 221

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
                 H+ A+++SG ++ +G    GQLG+   N+  +R  P
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGL---NDTQDRNLP 260



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 24/155 (15%)

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVA 269
           +PV+      H     +   +  WG   +G LG G  E E++  P+ +      +   +A
Sbjct: 13  EPVIAVEYPLH-----KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIA 67

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G+  T V+++ G++YS G  +   LGH      +G +       QL+  L         
Sbjct: 68  CGENYTVVITQIGEIYSCGNNDYGQLGHE-----KGRKRL-----QLIPGLDA------- 110

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                +     HT A+ E G+L+++G+  +GQLG+
Sbjct: 111 FVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGL 145



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++LQ  +I  AA G   ++ ++  G V+  G   +G+  +G    +++  P+ V  
Sbjct: 260 PCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL--PRQVME 317

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q + G   T A++   GRVY +  G   +LG+H+  +   P  + G
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY++   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT +    +               HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVY++G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL--GLLGSEEYIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      VA G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VYS G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYSWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEEYIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 25/272 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +I     G    +L+S+ G VY             V  T+ +  P+++E+   I V Q A
Sbjct: 76  KIEAVGCGDDEVILLSEKGSVYR------------VDVTQALYLPRMLEAFCRIPVSQVA 123

Query: 108 IGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G+  T  L++EG+VYT  WG ++R  LG   +   +     + +L  +P+VQ++AG  +
Sbjct: 124 CGSRHTVALTKEGQVYT--WGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 224
             AL+   S   V+  G    G+LG G   D   P  ++    LNL+    ++ G  H A
Sbjct: 182 SFALSVSGS---VFGWGRNDCGQLGLGDSQDRCTPTSVDS---LNLKKTTSISCGKDHTA 235

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           ++ + G V T+G G++G LGH +   E  P++V  L   K   +A G Y T V+ E+  +
Sbjct: 236 ILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKI 295

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           YSFGC +   LG +   D   +    VL PQ+
Sbjct: 296 YSFGCNDQNQLGRS--NDSHPSVPLPVLLPQV 325



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 25/220 (11%)

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 205
           +L     IPV Q+A G  + +AL  +     VY+ G    G+LG G +      P+ +  
Sbjct: 110 MLEAFCRIPVSQVACGSRHTVALTKEGQ---VYTWGQNSRGQLGLGKKGCSISSPQCVRS 166

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDV 263
              + L  V V+AG  H+  +   G V  +GWGR  C  LG G+ +    P  V +LN  
Sbjct: 167 LSGMPL--VQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           K   ++ G   T ++++ G V++FG G+   LGHN+          N L P+LV  L   
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNS--------SRNELRPRLVAEL--W 272

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +V +I+         HT  L E+ K+Y+FG  D+ QLG
Sbjct: 273 GAKVTRIACGR-----YHTLVLQENNKIYSFGCNDQNQLG 307



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            +P   RSL G+ ++Q +AG   +  +S +G V+ +G++  G+   G+  ++   +P  V
Sbjct: 159 SSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQL--GLGDSQDRCTPTSV 216

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           +SL        + G   TA+L++ G V+TF  G   +LGH++  N++ P  L+  L    
Sbjct: 217 DSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR-LVAELWGAK 275

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           V +IA G  + L L        +YS GC    +LG   R+++ HP
Sbjct: 276 VTRIACGRYHTLVLQ---ENNKIYSFGCNDQNQLG---RSNDSHP 314



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 29/197 (14%)

Query: 178 VYSVGCG-----LGGKLGHGSRTDEKH----PRLIEQFQLLNLQPVV-VAAGAWHAAVVG 227
           + +VGCG     L  + G   R D       PR++E F  +   PV  VA G+ H   + 
Sbjct: 77  IEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRI---PVSQVACGSRHTVALT 133

Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           ++G+V TWG    G LG G + C  S P+ V++L+ +  + V+ G   +F +S  G V+ 
Sbjct: 134 KEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFG 193

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +   LG   + D Q        TP  V SL    ++   IS         HT  LT
Sbjct: 194 WGRNDCGQLG---LGDSQDR-----CTPTSVDSLNL--KKTTSISCGKD-----HTAILT 238

Query: 347 ESGKLYAFGAGDKGQLG 363
           + G ++ FG+G  GQLG
Sbjct: 239 KHGTVFTFGSGQFGQLG 255



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +P++++A   +    VA G   T  ++++G VY++G      LG        G +  ++ 
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLG-------LGKKGCSIS 159

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +PQ V SL  +   +VQ+S         H+FAL+ SG ++ +G  D GQLG+    +  +
Sbjct: 160 SPQCVRSLSGMP--LVQVSAGGD-----HSFALSVSGSVFGWGRNDCGQLGL---GDSQD 209

Query: 373 RGNPERVD 380
           R  P  VD
Sbjct: 210 RCTPTSVD 217


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 28/319 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           + +  + G   + +I+++G++Y FG + +G+   G+   K  T P  V+SLK   V   A
Sbjct: 37  KAMHISCGDEHSAIITESGRLYTFGSNDWGQ--LGLGHMKPTTKPGCVKSLKQEGVNLVA 94

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T V ++ GR+Y+F  G+D +LG  T        P L  L       ++AG  +  
Sbjct: 95  CGRSHTIVCTKAGRLYSFGAGSDGQLG--TGDAQCATSPQLINLPEQKYKLLSAGTDHSA 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           AL    +   +Y  G G  G+LG G+    + P+ ++    ++     V+ G +H A+V 
Sbjct: 153 ALTTDGT---LYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSW----VSCGYYHTAIVT 205

Query: 228 QDGRVCTWGWGRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
            DG++ T+G   +G LG   ++ E  + PK V+++ + K   VA G   T V+S+ G++Y
Sbjct: 206 DDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISDVGNLY 264

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +FG G    LG+       G     +  PQ V  L +   + V          + HT  +
Sbjct: 265 TFGDGMHGQLGN-------GPSLLQLSLPQKVARLSEHKCKYVSCG-------DNHTAVI 310

Query: 346 TESGKLYAFGAGDKGQLGI 364
           TE G +Y FG G  G+LGI
Sbjct: 311 TEKGAMYTFGDGRHGKLGI 329



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 143/303 (47%), Gaps = 37/303 (12%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I + G ++ FGK  F +             P     ++N   +  + G+  +A+++  GR
Sbjct: 9   IPETGAIFTFGKSRFAD-----------NLPSKFW-IRNDKAMHISCGDEHSAIITESGR 56

Query: 122 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           +YTF   +  +LG  H +P   +P   + +L+   V  +A G  +   + C  +G  +YS
Sbjct: 57  LYTFGSNDWGQLGLGHMKPT-TKP-GCVKSLKQEGVNLVACGRSH--TIVCTKAGR-LYS 111

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G G  G+LG G       P+LI    L   +  +++AG  H+A +  DG +  WG G  
Sbjct: 112 FGAGSDGQLGTGDAQCATSPQLI---NLPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSE 168

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           G LG GN +    PK ++  + V    V+ G Y T +V++DG +Y+FG  E   LG    
Sbjct: 169 GQLGLGNTDSVETPKELKFHSSVSW--VSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTE- 225

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                ++  +  TP+ V S   + E++  ++        AHT  +++ G LY FG G  G
Sbjct: 226 -----DQLEDTTTPKHVES---ITEKIKLVACG-----GAHTAVISDVGNLYTFGDGMHG 272

Query: 361 QLG 363
           QLG
Sbjct: 273 QLG 275



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+   +   A G   T++ + AG++Y+FG  S G  + G    +  TSPQL+  
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDG--QLGTGDAQCATSPQLINL 136

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            +  + + +A G   +A L+ +G +Y +  G++ +LG     +   P  L     +  V 
Sbjct: 137 PEQKYKLLSA-GTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKEL---KFHSSVS 192

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVV 215
            ++ GY Y  A+        +Y+ G    GKLG       D   P+ +E    +  +  +
Sbjct: 193 WVSCGY-YHTAIVTDDG--KLYTFGEKEFGKLGLTEDQLEDTTTPKHVES---ITEKIKL 246

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYT 274
           VA G  H AV+   G + T+G G +G LG+G    + S+P+ V  L++ K  +V+ GD  
Sbjct: 247 VACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNH 306

Query: 275 TFVVSEDGDVYSFGCGESASLG 296
           T V++E G +Y+FG G    LG
Sbjct: 307 TAVITEKGAMYTFGDGRHGKLG 328



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 16/163 (9%)

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           L  +F + N + + ++ G  H+A++ + GR+ T+G   +G LG G+ +  + P  V++L 
Sbjct: 27  LPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLK 86

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
                 VA G   T V ++ G +YSFG G    LG     D Q        +PQL+ +L 
Sbjct: 87  QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLG---TGDAQ-----CATSPQLI-NLP 137

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           +   +++            H+ ALT  G LY +G+G +GQLG+
Sbjct: 138 EQKYKLLSAG-------TDHSAALTTDGTLYMWGSGSEGQLGL 173



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 22/204 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           +AG   +  ++  G +Y +G  S  E + G+  T  V +P+ ++   ++  V  + G + 
Sbjct: 145 SAGTDHSAALTTDGTLYMWGSGS--EGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYH 200

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           TA+++ +G++YTF      +LG   +   +   P  +    E I +V     +  +++  
Sbjct: 201 TAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDV 260

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
                  +Y+ G G+ G+LG+G         +K  RL E       +   V+ G  H AV
Sbjct: 261 GN-----LYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEH------KCKYVSCGDNHTAV 309

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEE 249
           + + G + T+G GR+G LG   E+
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 22/241 (9%)

Query: 126 SWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           SWG   +  LGH +  N+  P P+  +L+   V+Q+A G  +  AL    S   +YS G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALC---SSGQIYSWGI 56

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           GL G+LGHG+  D   P+++   +  N   V +A GA H+A + QDG++ +WG G  G L
Sbjct: 57  GLNGRLGHGNIQDSSAPKMLASTKK-NCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGEL 115

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           G+G    +  P +V  L D+   +VA G  TTF  +  G ++S+G G+   L       G
Sbjct: 116 GNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCL-------G 168

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            G+R  + L P LV   ++  +R+++++         H  ALTE GKL+ +G G  G  G
Sbjct: 169 LGDRE-DRLEPSLVRLREE--DRIIRVACGEH-----HCLALTEDGKLWGWGRGTGGCHG 220

Query: 364 I 364
           +
Sbjct: 221 L 221



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 24/268 (8%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ ++SLK   V+Q A+G    + L   G++Y++  G + RLGH    +   P  L  T 
Sbjct: 21  PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +N   VQIA G  +   L        +YS G GL G+LG+G R D+  P L+   +L +L
Sbjct: 81  KNCTAVQIACGAAHSAYLT---QDGKLYSWGRGLNGELGNGERHDQWTPNLV--LRLRDL 135

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               VA G          G + +WG G++GCLG G+ E    P +V+   + + I VA G
Sbjct: 136 VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACG 195

Query: 272 DYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
           ++    ++EDG ++ +G G      LGH           + VL+P     L    +R + 
Sbjct: 196 EHHCLALTEDGKLWGWGRGTGGCHGLGHT----------SEVLSPH---KLPMPEDRTI- 241

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAG 357
           +S++   +   H+  LT  G ++ FG+G
Sbjct: 242 VSMSCGRW---HSAYLTIRGDIFCFGSG 266



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 11/256 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVE 96
           P   +SL+   +IQ A G      +  +GQ+Y++G    G   +G +Q +   ++P+++ 
Sbjct: 21  PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDS---SAPKMLA 77

Query: 97  SL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           S  KN   VQ A G   +A L+++G++Y++  G +  LG+    +   P+ +L  L ++ 
Sbjct: 78  STKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQWTPNLVL-RLRDLV 136

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A G       AC   G+ ++S G G  G LG G R D   P L+   +   +  + 
Sbjct: 137 VSYVACG--TNTTFACTGGGL-LFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRI--IR 191

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VA G  H   + +DG++  WG G  GC G G+      P  +    D   + ++ G + +
Sbjct: 192 VACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHS 251

Query: 276 FVVSEDGDVYSFGCGE 291
             ++  GD++ FG G 
Sbjct: 252 AYLTIRGDIFCFGSGR 267



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 14/222 (6%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N R G  N+  ++ +   +   + +    +Q A GA  +  ++  G++Y++G+   GE 
Sbjct: 58  LNGRLGHGNI--QDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGEL 115

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
             G +  +   +P LV  L+++ V   A G   T   +  G ++++  G    LG     
Sbjct: 116 GNGERHDQW--TPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDRE 173

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG--KLGHGSRTDE 197
           + +EP  L+   E   ++++A G  + LAL        ++  G G GG   LGH S    
Sbjct: 174 DRLEP-SLVRLREEDRIIRVACGEHHCLALT---EDGKLWGWGRGTGGCHGLGHTSEVLS 229

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
            H   + + + +    V ++ G WH+A +   G +  +G GR
Sbjct: 230 PHKLPMPEDRTI----VSMSCGRWHSAYLTIRGDIFCFGSGR 267


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 165/354 (46%), Gaps = 50/354 (14%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQA 106
           I+  + G+  TM ++ +G VY++G  S G+  +G    K++  PQ +   +   + V   
Sbjct: 51  IVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHG--DLKIINEPQKIAFFEQERLEVDYI 108

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIP-------VVQ 158
           + G   +A ++++G +Y   WG ++  G    P + E  H  L     +P       +V+
Sbjct: 109 SCGGCHSAAVTKDGTLYV--WG-ESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVK 165

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS----------RTDEKHPRLIEQFQL 208
           ++ G  +  AL    S   VY  G G  G+LG GS                P L++ F  
Sbjct: 166 VSCGGTHTAALT---SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAF-- 220

Query: 209 LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
            N + VV VA GA+H+A V + G V  WG   YG LG G    + +PK ++  +D+  + 
Sbjct: 221 -NGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLR 279

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           V+ G + T VV++ GD Y+FG GE   LG   + D +         P LV +LK   + V
Sbjct: 280 VSCGGWHTVVVAKSGDCYAFGRGEYGRLG---LGDTKSRTR-----PHLVKALK--GKTV 329

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           +Q +   S     HT  +T  G  Y  G  D G+LG+    +    G P R+D+
Sbjct: 330 IQAACGGS-----HTLFVTSDGTAYVAGRPDHGRLGLA---DMKALGVPTRLDL 375



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 21/241 (8%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           +G L +  +V ++ G  + +AL    S  AVYS G G  G+LGHG       P+ I  F+
Sbjct: 43  IGNLPDEDIVAVSCGSRHTMALT---SSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFE 99

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWG---WGRYGCLGHGNEECESVP---KVVQALN 261
              L+   ++ G  H+A V +DG +  WG   WG+ G         ES+P    + +   
Sbjct: 100 QERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEA 159

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI--ADGQGNRHANVLTPQLVTS 319
               + V+ G   T  ++  G VY +G G+S  LG  ++   D +         P L+ +
Sbjct: 160 GETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKA 219

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                E+VVQ++         H+ A+TE G +Y +G  D G LG   V   +++  P+R+
Sbjct: 220 FN--GEKVVQVACG-----AFHSAAVTEQGHVYVWGKEDYGMLG---VGQSSDQQIPKRL 269

Query: 380 D 380
           +
Sbjct: 270 E 270



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++  G +++Q A GA  +  +++ G VY +GK+ +G    G    + +  P+ +E 
Sbjct: 214 PHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI--PKRLEY 271

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
             +I V++ + G + T V+++ G  Y F  G   RLG     +   PH L+  L+   V+
Sbjct: 272 FDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPH-LVKALKGKTVI 330

Query: 158 QIAAGYCYLL 167
           Q A G  + L
Sbjct: 331 QAACGGSHTL 340


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  108 bits (269), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 31/289 (10%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHP 146
           P +V+   +I +++ + GN FT  LS+EG VY++  GN   LG   +     PN ++   
Sbjct: 243 PSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQK 302

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--- 203
                +NI    IA G  ++L+L  Q  G+ VYS G G GG+LGHG  T E  P+ I   
Sbjct: 303 NGHLFQNIK--DIACGSNHVLSLDHQ--GI-VYSWGNGQGGRLGHGDETGENIPKEIIGL 357

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            Q+++L     ++ AG   +A +     +  WG G +G LG G       P +++ L D 
Sbjct: 358 RQYKIL-----MIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQ 412

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           K   +A G   +  +  +G    +G  +   LG     D       N   P+ + +L + 
Sbjct: 413 KVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALD------RNFTQPKELVTLDK- 465

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            E++ QI+         H+ ALTE+G++Y+FG    G+LG + +    +
Sbjct: 466 -EKLYQIAAG-----PFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQ 508



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 42/285 (14%)

Query: 118 REGRVYTFSWG--NDARLG--------HHTEPNDVEPHPLLGTL----ENIPVVQIAAGY 163
           R G    F+WG  N+ RLG         + E  + E  P   ++     +I +++++ G 
Sbjct: 202 RCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGN 261

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ------FQLLNLQPVVVA 217
            + LAL+ +     VYS G G  G LG G +     P +I+       FQ  N++ +  A
Sbjct: 262 SFTLALSQEGH---VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQ--NIKDI--A 314

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G+ H   +   G V +WG G+ G LGHG+E  E++PK +  L   K + +  G+ ++  
Sbjct: 315 CGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAA 374

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S   +++ +G G    LG          + ANVL P ++  LK  +++V  I+L ++  
Sbjct: 375 ISIKNELFIWGVGLHGRLG--------TGKTANVLKPVMLEDLK--DQKVEDIALGSN-- 422

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
              H+  +  +GK   +G+   G+LG+E   ++      E V +D
Sbjct: 423 ---HSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLD 464



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 87/378 (23%), Positives = 144/378 (38%), Gaps = 82/378 (21%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+  +I+   AG G +  IS   +++ +G    G    G   T  V  P ++E LK+  V
Sbjct: 357 LRQYKILMIEAGEGSSAAISIKNELFIWGVGLHGR--LGTGKTANVLKPVMLEDLKDQKV 414

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT--EPNDVEPHPLLGTLENIPVVQIAA 161
              A+G+  +  + R G+   +    D +LG  T  + N  +P  L+ TL+   + QIAA
Sbjct: 415 EDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELV-TLDKEKLYQIAA 473

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           G  + +AL        +YS G    GKLG+   + + + PR I    +            
Sbjct: 474 GPFHSIALT---ENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIF----------- 519

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
             A   G + R       +Y      +++  +V    Q L   + I    G  +T  +  
Sbjct: 520 --ARKTGLNDRR-----DKYQLFNQFDDQM-TVISNNQQLGGCEVIQAQCGFNSTVFLLN 571

Query: 281 DGDVYSFGCGESASLGHNAIADGQ---GNR------------------------------ 307
           DG +Y  G  +   LG +  A G+   GN+                              
Sbjct: 572 DGQMYVCGSNKYGQLGFSKRAGGKDKDGNKMLINSNNDGNQGGMSGANDNDNDDDDNGIG 631

Query: 308 -------HANVLTPQLVTSLKQVNE-RVVQISLTNSIYWNA-------------HTFALT 346
                    +VL PQL   L ++ + + V+     +IY +A             H  A+T
Sbjct: 632 GGFLQQNSDDVLPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVT 691

Query: 347 ESGKLYAFGAGDKGQLGI 364
             G  + +G  D GQLG+
Sbjct: 692 HEGATFGWGRNDNGQLGM 709



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 53/287 (18%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           +   + G F    ++ EG   TF WG  ++ +LG   +   V     + +L++  ++  A
Sbjct: 677 IKHVSTGYFHVLAVTHEGA--TFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTA 734

Query: 161 AGYCYLLALA------CQPSGMAVY-SVGCGLGGKLGHGSRT-------DEKHPR-LIEQ 205
           +G  + L L+      C  SG   +  +G GL    G   +        DE + R LIE 
Sbjct: 735 SGESHSLFLSDLGEVLC--SGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIET 792

Query: 206 FQLLNLQPVVV---------AAGAWHAAVVGQDGR------VCTWGWGRYGCLGHGNEEC 250
              + L P ++         AAG  H+  +    R      + TWG G +G  GHG+ + 
Sbjct: 793 --KIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQN 850

Query: 251 ESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           + +P++V+   L D K I  + G   T  +   G ++ FG     S+G     D +    
Sbjct: 851 DYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG--YKPSVGIEDFNDEKQFMP 908

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           A + TP       ++ E    IS         H  A+T+SG +Y FG
Sbjct: 909 ARLETPS------KIQEPFKFISSGEE-----HNLAVTQSGLVYGFG 944



 Score = 50.4 bits (119), Expect = 0.001,   Method: Composition-based stats.
 Identities = 78/346 (22%), Positives = 142/346 (41%), Gaps = 53/346 (15%)

Query: 23   RNGKRNL-LGRE--VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            RN    L +GR+  V   P   +SLQ   II  A+G   ++ +SD G+V   G + FGE 
Sbjct: 701  RNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGEL 760

Query: 80   EYGVQG-------------------------TKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
              G+                           TK+  +P++++ L++I  + AA  N   A
Sbjct: 761  GIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLESIGFI-AAGKNHSIA 819

Query: 115  VLS---REGRVYTFSWGN--DARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLA 168
            + +   +E  +  F+WG     + GH +  ND  P  + +  L++   +Q + G  + +A
Sbjct: 820  IRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIA 879

Query: 169  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            L    +G   +    G    +G     DEK   P  +E    +      +++G  H   V
Sbjct: 880  L--DTTGHIWF---FGYKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAV 934

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDG 282
             Q G V  +G+G+     + N +  S  K      Q  N+ KA+  A G   + ++   G
Sbjct: 935  TQSGLV--YGFGK-----NTNTKINSSHKEYLYFDQVENEEKAVLTACGANHSVLIDTKG 987

Query: 283  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
              Y++G   +   G     D       ++  P ++  +K + ++ +
Sbjct: 988  VPYTWGFVGNGRCGLKLEKDDAQQEQESLSAPTVIYFMKTLFQKEI 1033


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   L+ +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LVGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 149/333 (44%), Gaps = 52/333 (15%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G     L++  G++Y++G++S G   +GV     V+ P+L+++L ++ +   A G + 
Sbjct: 355 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDALSHMNIELVACGEYH 412

Query: 113 TAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+       LGH  + +   P  + G LE I V  I+ G  +   
Sbjct: 413 TCAVTLSGDLYT--WGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTAV 470

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG R     PR +E   L  L+ V  A G WH A V +
Sbjct: 471 VT---SAGQLFTFGDGSFGVLGHGDRESISVPREVE--SLKGLRTVRAACGVWHTAAVVE 525

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++  + VP  V AL +     VA G   T 
Sbjct: 526 VMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTV 585

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADG------QGNRHANVLTPQLVTSLKQVNERVVQI 330
            ++  G VY+ G      LG NA ADG      +G  H N                V +I
Sbjct: 586 ALTTSGHVYTMGSAVYGQLG-NAQADGMLPVRVEGKLHKNF---------------VEEI 629

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           S     Y   H   LT   ++Y +G G  G+LG
Sbjct: 630 SC--GAY---HVAVLTSKTEVYTWGKGANGRLG 657



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 453 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRT 510

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P  +   +
Sbjct: 511 VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALV 570

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     Q+A G+C  +AL    +   VY++G  + G+LG+ ++ D   P  +E     N 
Sbjct: 571 EP-NFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-AQADGMLPVRVEGKLHKNF 625

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ + ++ P +V+AL D +   V  G
Sbjct: 626 VEEI-SCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCG 684



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 38/303 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +E    + V   + G    A+++++G +Y  SWG ++  RLGH  +  DV    L+ 
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIY--SWGEESGGRLGHGVD-CDVSQPKLID 396

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L ++ +  +A G  +  A+      +  +  G    G LGHG+      P+ +    L 
Sbjct: 397 ALSHMNIELVACGEYHTCAVTLS-GDLYTWGDGTFKFGLLGHGNDISHWVPKHVNG-PLE 454

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++ G WH AVV   G++ T+G G +G LGHG+ E  SVP+ V++L  ++ +  A
Sbjct: 455 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 514

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 515 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGH-------GDKGPK-LVPTCV 566

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  + +     T ALT SG +Y  G+   GQLG    N Q +   P 
Sbjct: 567 AALVEPN--FCQVACGHCL-----TVALTTSGHVYTMGSAVYGQLG----NAQADGMLPV 615

Query: 378 RVD 380
           RV+
Sbjct: 616 RVE 618


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRY----VPNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 146/334 (43%), Gaps = 41/334 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L+   G+V+ +G+DS G   +G +  +    P+LVESL    V   
Sbjct: 77  LDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTR--EDCVRPRLVESLTVSNVDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +Y  SWG    N   LGH  +     P  + G LE + V  ++ G
Sbjct: 135 ACGEFHTCAVTTTGELY--SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCG 192

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   +    S   +++ G G  G LGHG      +PR +E   L  L+ + VA G WH
Sbjct: 193 TWHTALIT---SMGQLFTFGDGSFGVLGHGDLKSVSYPREVES--LSGLKTIAVACGVWH 247

Query: 223 AAVVGQ-------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            A + +              G++ TWG G    LGHG++E    P  V  L D     VA
Sbjct: 248 TAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVA 307

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G V S G         NA+    GN H++   P LV   K V E+V+Q
Sbjct: 308 CGHSLTVALTTSGQVLSMG---------NAVYGQLGNPHSDGRIPCLVED-KIVGEQVIQ 357

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           I+       + H   LT   +++ +G G  G+LG
Sbjct: 358 IACG-----SYHVAVLTGRNEVFTWGKGANGRLG 386



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%), Gaps = 21/251 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G+++   + G   T LI+  GQ++ FG  SFG   +G    K V+ P+ VESL  + 
Sbjct: 180 ALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--DLKSVSYPREVESLSGLK 237

Query: 103 VVQAAIGNFFTA-----VLSRE--------GRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            +  A G + TA     +++R         G+++T+  G+  RLGH  +   ++P   + 
Sbjct: 238 TIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKP-TCVA 296

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           TL +    ++A G+   +AL    SG  V S+G  + G+LG+   +D + P L+E  +++
Sbjct: 297 TLIDHDFYRVACGHSLTVALTT--SGQ-VLSMGNAVYGQLGN-PHSDGRIPCLVED-KIV 351

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
             Q + +A G++H AV+     V TWG G  G LGHG+ E   VP +V+ L D    ++A
Sbjct: 352 GEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIA 411

Query: 270 TGDYTTFVVSE 280
            G   T  + +
Sbjct: 412 CGANFTAAICQ 422



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 39/289 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    A++ + G V  F+WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVKHAALVMKNGEV--FTWGEDSGGRLGHGTREDCVRPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    V  +A G  +  A+    +   +YS G G    G LGHG+      P+ +    
Sbjct: 125 SLTVSNVDFVACGEFHTCAVT---TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSG-A 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
           VA G + T  + E              G ++++G G+   LGH       G++    L P
Sbjct: 241 VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGH-------GDKETR-LKP 292

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             V +L  ++    +++  +S+     T ALT SG++ + G    GQLG
Sbjct: 293 TCVATL--IDHDFYRVACGHSL-----TVALTTSGQVLSMGNAVYGQLG 334



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 32/313 (10%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P    SL    +   A G   T  ++  G++Y++G  +      G         
Sbjct: 114 REDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWI 173

Query: 92  PQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-----TEPNDVEPH 145
           P+ V  +L+ + V   + G + TA+++  G+++TF  G+   LGH      + P +VE  
Sbjct: 174 PKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVE-- 231

Query: 146 PLLGTLENIPVVQIAAGYCYLLAL----------ACQPSGMAVYSVGCGLGGKLGHGSRT 195
               +L  +  + +A G  +  A+          + + S   +++ G G   +LGHG + 
Sbjct: 232 ----SLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKE 287

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P  +    L++     VA G      +   G+V + G   YG LG+ + +      
Sbjct: 288 TRLKPTCVAT--LIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCL 345

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
           V   +   + I +A G Y   V++   +V+++G G +  LGH  I D +         P 
Sbjct: 346 VEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRK--------VPT 397

Query: 316 LVTSLKQVNERVV 328
           LV  LK    R +
Sbjct: 398 LVEVLKDRAVRYI 410


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 33/328 (10%)

Query: 53   AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNF 111
            AAG    + ++  G V+++G +S G+   G  GT    + PQ + ++ N+  +  A G  
Sbjct: 1039 AAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI--ACGGS 1096

Query: 112  FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 171
             +  ++R+G ++++ +    +LG     +   P  +   + N  V  IAAG  Y LAL  
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV-NAISN--VAAIAAGEYYSLALTR 1153

Query: 172  QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
              S   V+S G    G+LG G   D   P+ +E    +      +AAG  H+  + +DG 
Sbjct: 1154 DGS---VWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNV----AAIAAGEDHSLALTRDGS 1206

Query: 232  VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            V +WG    G LG  + +  + P+ V  ++++KAI  A G+  +F +SE+G  +++G   
Sbjct: 1207 VWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLAWAWGYNY 1264

Query: 292  SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
               LG      G     AN  TPQ V  +  V      + L+   Y   H+ ALTE G L
Sbjct: 1265 DGQLGI-----GTSGSLANENTPQKVKVISNV------VGLSGGNY---HSLALTEDGAL 1310

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERV 379
            +A+G  D GQ+G    +   +R NP +V
Sbjct: 1311 WAWGDNDDGQIG----STGGDRKNPVQV 1334



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 35/317 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNF 111
           AAG G  + ++  G V+++G++S G+   G  GT    + PQ + ++ N+  +  A G  
Sbjct: 550 AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAI--ACGGS 607

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 171
            +  L+R+G  +++ +    +LG     +   P  +   L N  VV +AAG  + LAL  
Sbjct: 608 HSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV-NALSN--VVAMAAGDRHSLALTL 664

Query: 172 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
             S   ++S G    G+LG G       PR +     +    V +AAG  H+  + +DG 
Sbjct: 665 DGS---LWSWGDNTYGQLGLGDNDHRNTPRKVNAISNV----VAIAAGYRHSLALTRDGS 717

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V +WG    G LG G+ +  + P+ V  ++++KAI  A G+  +  +SE+G V+++G   
Sbjct: 718 VWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISEEGLVWAWGYNC 775

Query: 292 SASLG---HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
           S  LG   H ++AD          TPQ V  +      VV +S  +S     H+ ALTE 
Sbjct: 776 SGQLGIGTHGSLADEN--------TPQKVIVIS----NVVGLSAGSS-----HSIALTED 818

Query: 349 GKLYAFGAGDKGQLGIE 365
           G L+A+G  + GQ+  E
Sbjct: 819 GALWAWGNNEAGQIAAE 835



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 34/332 (10%)

Query: 53   AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
            AAG   ++ +   G ++++G +  G+   G+  +  V +P  V++L      + A G+  
Sbjct: 987  AAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAAGDNH 1044

Query: 113  TAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
               L+ +G V+++ + +D +LG     T      P  +   + N  V  IA G  + LA+
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKI-NAISN--VAAIACGGSHSLAV 1101

Query: 170  ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
            A   S   ++S G    G+LG G    +  P+ +     +      +AAG +++  + +D
Sbjct: 1102 ARDGS---LWSWGYNYYGQLGLGDNYSKTTPQKVNAISNV----AAIAAGEYYSLALTRD 1154

Query: 230  GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
            G V +WG    G LG G+ E  + P+ V+ L++V AI  A G+  +  ++ DG V+S+G 
Sbjct: 1155 GSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLALTRDGSVWSWGR 1212

Query: 290  GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
                 LG     D   +R+    TPQ VT++  +               N+H+FA++E G
Sbjct: 1213 NSRGQLG----LDDNDDRN----TPQPVTTISNIKAIAAG---------NSHSFAISEEG 1255

Query: 350  KLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              +A+G    GQLGI    +      P++V +
Sbjct: 1256 LAWAWGYNYDGQLGIGTSGSLANENTPQKVKV 1287



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 36/331 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG G ++ +   G V+++G +  G+   G+     V +P  V++L        A G   
Sbjct: 498 AAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGGH 555

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHP-LLGTLENIPVVQIAAGYCYLLA 168
              L+ +G V+  SWG ++              E  P  +  + N  V  IA G  + LA
Sbjct: 556 ALALASDGSVW--SWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGGSHSLA 611

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           LA   S    +S G    G+LG G    +  PR +     +    V +AAG  H+  +  
Sbjct: 612 LARDGS---FWSWGYNYYGQLGLGDNVSKTTPRKVNALSNV----VAMAAGDRHSLALTL 664

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG + +WG   YG LG G+ +  + P+ V A+++V AI  A G   +  ++ DG V+S+G
Sbjct: 665 DGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAI--AAGYRHSLALTRDGSVWSWG 722

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG   + D   N   N  TPQ VT++  +    V          N ++ A++E 
Sbjct: 723 NNTRGQLG---LGD---NDDRN--TPQPVTTISNIKAIAVG---------NNYSIAISEE 765

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           G ++A+G    GQLGI    +  +   P++V
Sbjct: 766 GLVWAWGYNCSGQLGIGTHGSLADENTPQKV 796



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 35/319 (10%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            I+  AAG   ++ ++  G ++A+G + +G+   G    +L  +P     L ++  +  A
Sbjct: 118 NIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDVAAI--A 173

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G++     ++ G V+     +  +LG   +  D  P  + G L N  V  +AAG  + L
Sbjct: 174 GGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA-PVQVAG-LSN--VKSVAAGEFFSL 229

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL    +   V++ G     +LG G   +    P  I     +      +AAG  HA  +
Sbjct: 230 ALKNDGT---VWAWGNNESAQLGTGIAGEAVATPAPIAVLSNI----TAIAAGRRHAMAL 282

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG V  WG    G LG G+ E    P  V +L DV AI  A+G + +  ++ DG +++
Sbjct: 283 AEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTAI--ASGWFHSLALTSDGVLWA 340

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G      LG +A +D           P  V+S+         +S         H+ A+ 
Sbjct: 341 WGNNGDGRLGTDATSDQS--------LPAQVSSISNA------VSFAGG---QRHSLAIA 383

Query: 347 ESGKLYAFGAGDKGQLGIE 365
             G ++++G    GQLG+E
Sbjct: 384 ADGSVWSWGGNAYGQLGVE 402



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 39/317 (12%)

Query: 58  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
            ++ +   G V+ +G++ + +   G    +L  +P+    + NI  V  A G  F+  L+
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNI--VSVAAGRLFSLALA 133

Query: 118 REGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
            +G ++  +WG +   +LG     N + P    G  +   V  IA G  +  ALA   SG
Sbjct: 134 SDGSLW--AWGGNYYGQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYH--ALAATQSG 186

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             V+++G    G+LG    T +     ++   L N++ V  AAG + +  +  DG V  W
Sbjct: 187 -EVWAMGRNDHGQLGF---TGDHADAPVQVAGLSNVKSV--AAGEFFSLALKNDGTVWAW 240

Query: 236 GWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           G      LG G   E  + P  +  L+++ AI  A G      ++EDG V+++G   S  
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAWGANGSGQ 298

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG       +         P  V+SL  V       ++ +  +   H+ ALT  G L+A+
Sbjct: 299 LGFGDFETPK--------APGRVSSLADV------TAIASGWF---HSLALTSDGVLWAW 341

Query: 355 GAGDKGQLGIELVNNQT 371
           G    G+LG +  ++Q+
Sbjct: 342 GNNGDGRLGTDATSDQS 358



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 28/239 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +L    ++  AAG   ++ ++  G ++++G +++G  + G+       +P+ V 
Sbjct: 639 TPRKVNALS--NVVAMAAGDRHSLALTLDGSLWSWGDNTYG--QLGLGDNDHRNTPRKVN 694

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           ++ N+  +  A G   +  L+R+G V+  SWGN+ R    LG + + N   P P+  T+ 
Sbjct: 695 AISNVVAI--AAGYRHSLALTRDGSVW--SWGNNTRGQLGLGDNDDRN--TPQPVT-TIS 747

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLL 209
           NI  + +   Y    ++A    G+ V++ G    G+LG   HGS  DE  P+ +    ++
Sbjct: 748 NIKAIAVGNNY----SIAISEEGL-VWAWGYNCSGQLGIGTHGSLADENTPQKV----IV 798

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
               V ++AG+ H+  + +DG +  WG    G +    E  E +   VQ     +  H+
Sbjct: 799 ISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIA-AEEAIEYIDNPVQVFQSGEVFHL 856



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 23/228 (10%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP    ++  +  I  AAG   ++ ++  G V+++G +S G+   G+   +   +PQ VE
Sbjct: 1128 TPQKVNAISNVAAI--AAGEYYSLALTRDGSVWSWGDNSDGQ--LGLGDNEDRNTPQKVE 1183

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENI 154
             L N+  +  A G   +  L+R+G V+  SWG ++R  LG     +   P P+  T+ NI
Sbjct: 1184 VLSNVAAI--AAGEDHSLALTRDGSVW--SWGRNSRGQLGLDDNDDRNTPQPVT-TISNI 1238

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNL 211
                IAAG  +  A++ +  G+A ++ G    G+LG    GS  +E  P+ ++    +  
Sbjct: 1239 KA--IAAGNSHSFAISEE--GLA-WAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV-- 1291

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
              V ++ G +H+  + +DG +  WG    G +G    + ++  +V Q+
Sbjct: 1292 --VGLSGGNYHSLALTEDGALWAWGDNDDGQIGSTGGDRKNPVQVFQS 1337



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 17/208 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L  ++ +  AAG   ++ + + G V+A+G +   +   G+ G + V +P  +  
Sbjct: 209 PVQVAGLSNVKSV--AAGEFFSLALKNDGTVWAWGNNESAQLGTGIAG-EAVATPAPIAV 265

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PV 156
           L NI  +  A G      L+ +G V+ +      +LG      D E     G + ++  V
Sbjct: 266 LSNITAI--AAGRRHAMALAEDGSVWAWGANGSGQLGF----GDFETPKAPGRVSSLADV 319

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             IA+G+ + LAL    S   +++ G    G+LG  + +D+  P  +          V  
Sbjct: 320 TAIASGWFHSLALT---SDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSIS----NAVSF 372

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           A G  H+  +  DG V +WG   YG LG
Sbjct: 373 AGGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N +P+V A+   H+  +  DG V  WG   Y  LG G++     P+    ++++  + VA
Sbjct: 67  NAEPMV-ASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSNI--VSVA 123

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   +  ++ DG ++++G      LG           + N LTP     L  V      
Sbjct: 124 AGRLFSLALASDGSLWAWGGNYYGQLGM--------GDNDNRLTPSKTPGLSDV------ 169

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            ++    Y   H  A T+SG+++A G  D GQLG 
Sbjct: 170 AAIAGGDY---HALAATQSGEVWAMGRNDHGQLGF 201



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 26/175 (14%)

Query: 210  NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKA 265
            N  P+V A G +  A+   DG +  W WG  G    G    +SV    P  V AL    A
Sbjct: 981  NPNPMVAAGGNFSLALK-TDGSL--WSWGDNGTGQLGLGLGQSVNVFTPTKVDAL--PPA 1035

Query: 266  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
              +A GD     ++ DG V+S+G      LG      G    ++    PQ + ++     
Sbjct: 1036 AKIAAGDNHALALAPDGSVWSWGYNSDGQLGL-----GSSGTYSTKNRPQKINAIS---- 1086

Query: 326  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
             V  I+   S     H+ A+   G L+++G    GQLG+    +   +  P++V+
Sbjct: 1087 NVAAIACGGS-----HSLAVARDGSLWSWGYNYYGQLGL---GDNYSKTTPQKVN 1133


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 148/332 (44%), Gaps = 39/332 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G V+ +G+DS G   +G +   +   P+LVESL    V   
Sbjct: 77  LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVESLAACNVDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ +PV  ++ G
Sbjct: 135 ACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCG 192

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ + VA G WH
Sbjct: 193 TWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVES--LSGLKTIAVACGVWH 247

Query: 223 AAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A + +            G++ TWG G    LGHG++E    P  V +L D     VA G
Sbjct: 248 TAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V S G         N++    GN +++   P LV   +   E V+Q++
Sbjct: 308 HSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RIAGEHVLQVA 357

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  + H   LT   +++ +G G  G+LG
Sbjct: 358 CG-----SYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 19/240 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L G+ +   + G   T LI+  GQ++ FG  SFG   +G      ++ P+ VESL  + 
Sbjct: 180 ALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLK 237

Query: 103 VVQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  + + ++P   + +L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +   C  +   V S+G  + G+LG+   +D + P L+E  ++   
Sbjct: 297 IDYDFYRVACGHSLTV---CLTTSGKVLSMGNSVYGQLGN-PNSDGRLPCLVED-RIAGE 351

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             + VA G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 117
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R G V+T  WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 176 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 282
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311

Query: 343 FALTESGKLYAFGAGDKGQLG 363
             LT SGK+ + G    GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   LL +  + +AAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQIAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +QI
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQI 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + +A G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 174/358 (48%), Gaps = 38/358 (10%)

Query: 21  NERNGKRNLLG--REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           N R+G+  L G   E+   P      +   I Q A G   T++I+  G++Y+ G + +G+
Sbjct: 54  NTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQ 113

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
             +  QG K +   QL+  L      +AA G + T  ++  G++  FSWG+++  +LG +
Sbjct: 114 LGHE-QGRKRL---QLILGLDAFVFKKAACGAYHTIAVNEWGQL--FSWGSNSEGQLGLN 167

Query: 137 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
           ++ N +E  P ++ TL    +VQIA G  + LAL    +   +YS G    G+LG G   
Sbjct: 168 SK-NFMECSPRMVKTLGTSIIVQIACGMKHALALT---NNGELYSWGSNSEGQLGLGVDI 223

Query: 196 D-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             E  P+LI    L  +    +A G +H+  + + G +  WG   +G LG  + +  ++P
Sbjct: 224 RCEMKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLP 281

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             +Q L + K  + A G+  +  ++ DG V++ G G    LGH     G  N   N + P
Sbjct: 282 YQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH-----GSNN---NEILP 333

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQT 371
           + V  L  +   V QIS         HT AL  S G++YA+G G  GQLG    NN T
Sbjct: 334 RQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQLG----NNST 380



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   ++L    I+Q A G    + +++ G++Y++G +S G+   GV   +    P+L+ 
Sbjct: 175 SPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVD-IRCEMKPKLIN 233

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           +L  + +   A G + +  +S+ G +  F WG +   +LG +   N   P+ L  TL N 
Sbjct: 234 TLAGVPIAFIACGGYHSIAISKSGAI--FGWGKNTFGQLGLNDTQNRNLPYQL-QTLRNA 290

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V   A G  + + L        V++ G G+ G+LGHGS  +E  PR +   +L+     
Sbjct: 291 KVCYAACGEEFSVFLTVDG---GVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVT 345

Query: 215 VVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            ++ G  H  A+V   GRV  WG G  G LG+ +    + P+VV+
Sbjct: 346 QISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVR 390


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 23/294 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C   Q + I++   G    + +S  G+VY +G   FG+   G +  + +  P  +E 
Sbjct: 131 PTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHL--PIRMEF 188

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPV 156
            ++  +V  + G   +A +S++GRV+T+ +G D +LGH+   ++++P  L     E I  
Sbjct: 189 FRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISR 248

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V     +  LL      +   +++ G G  G+LGHG R     P ++    L N++   V
Sbjct: 249 VTCGTDFTGLL----NETEGRLFTFGNGEAGQLGHGERGLCLEPSVVP---LDNVKE--V 299

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           AAG  H   + +DG+  +WGWG  G LGHG  E    P+ +  L   V  + V+ G   +
Sbjct: 300 AAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHS 359

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
             ++E G VY +G   S  L       G GN  ++V+TP L+ +L   ++RV++
Sbjct: 360 LALTESGQVYGWGFNASGRL-------GLGN-ESSVMTPTLIKAL--ADKRVLR 403



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 27/321 (8%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G   I AAAG  +  L++   ++Y +G      A   ++  K +  P L E  +++ +V+
Sbjct: 86  GASYIDAAAGWTQNFLLTTRHELYYWGSSGV-YALLPMRRDKRIYYPTLCEPAQSLGIVK 144

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH-PL-LGTLENIPVVQIAAGY 163
              G      LS+ G VY   WGN +  G     N    H P+ +    +  +V ++ G 
Sbjct: 145 IRTGRQHGIALSKNGEVYI--WGN-SEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGL 201

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +  A++       V++ G G+ G+LGH    DE  P+ +   +   +  V      +  
Sbjct: 202 DHSAAVSKDGR---VWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGT-DFTG 257

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
            +   +GR+ T+G G  G LGHG       P VV  L++VK   VA G      +++DG 
Sbjct: 258 LLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVV-PLDNVK--EVAAGGAHMLALTKDGQ 314

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            +S+G GE   LGH A  D         L P+ + +L      VV +S         H+ 
Sbjct: 315 AWSWGWGEDGRLGHGATED--------FLKPEPIPTLGPAVG-VVSVSAG-----GGHSL 360

Query: 344 ALTESGKLYAFGAGDKGQLGI 364
           ALTESG++Y +G    G+LG+
Sbjct: 361 ALTESGQVYGWGFNASGRLGL 381



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 22/265 (8%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EA 79
           N   G+  L  +E    P+     +   I+  + G   +  +S  G+V+ +G   +G + 
Sbjct: 166 NSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWG---YGIDG 222

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVYTFSWGNDARLGHHTE 138
           + G  GT+    P+ +  ++   + +   G  FT +L+  EGR++TF  G   +LGH   
Sbjct: 223 QLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGER 282

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
              +EP  +   L+N  V ++AAG  ++LAL     G A +S G G  G+LGHG+  D  
Sbjct: 283 GLCLEPSVV--PLDN--VKEVAAGGAHMLALT--KDGQA-WSWGWGEDGRLGHGATEDFL 335

Query: 199 HPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            P  I       L P V    V+AG  H+  + + G+V  WG+   G LG GNE     P
Sbjct: 336 KPEPIP-----TLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTP 390

Query: 255 KVVQALNDVKAIHVATG-DYTTFVV 278
            +++AL D + +    G D++ F+ 
Sbjct: 391 TLIKALADKRVLRAICGLDHSLFIT 415



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 32/249 (12%)

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----VQIAAGYCYLLALACQPSGMA 177
           VYT   G +A+LG      D+E + L   ++ +PV    +  AAG+     L  +     
Sbjct: 55  VYTCGTGRNAQLG----VGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHE--L 108

Query: 178 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
            Y    G+   L    R D++  +P L E  Q L +  V +  G  H   + ++G V  W
Sbjct: 109 YYWGSSGVYALLPM--RRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIW 164

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G   +G  G GN+E + +P  ++   D   + V+ G   +  VS+DG V+++G G    L
Sbjct: 165 GNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQL 224

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAF 354
           GHN   D         L P+ +T ++   E + +++          T  L E+ G+L+ F
Sbjct: 225 GHNGTED--------ELKPKELTVIR--GEGISRVTCGTDF-----TGLLNETEGRLFTF 269

Query: 355 GAGDKGQLG 363
           G G+ GQLG
Sbjct: 270 GNGEAGQLG 278


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 152/347 (43%), Gaps = 48/347 (13%)

Query: 39  LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           L+ +SL+   ++     A G     L++  G+++++G+++ G   +GV     V  P+L+
Sbjct: 299 LFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSD--VLHPKLI 356

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTL 151
           E+L N  +   A G + T  ++  G +YT  WGN       LGH  + +   P  + G L
Sbjct: 357 EALSNTNIELVACGEYHTCAVTLSGDLYT--WGNGTYNCGLLGHGNQVSHWVPKRVNGPL 414

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L
Sbjct: 415 EGIHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGL 469

Query: 212 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           + V  A G WH A V +             G++ TWG G  G LGHG++E + VP  V A
Sbjct: 470 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV-A 528

Query: 260 LNDVKA--IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           L +VK     VA G   T  ++  G VY+ G      LG                 PQ  
Sbjct: 529 LVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG----------------IPQAD 572

Query: 318 TSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
             L    E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 573 GKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 619



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 41/291 (14%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G    A+++++G +  FSWG +A  RLGH  + + + P  L+ 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEI--FSWGEEAGGRLGHGVDSDVLHPK-LIE 357

Query: 150 TLENIPVVQIAAGYCYLLALACQPS----GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            L N  +  +A G  +  A+         G   Y+  CGL   LGHG++     P+ +  
Sbjct: 358 ALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYN--CGL---LGHGNQVSHWVPKRVNG 412

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  +    ++ G WH AVV   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ 
Sbjct: 413 -PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT 471

Query: 266 IHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           +  A G + T  V E             G ++++G G+   LGH       G++ A  L 
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAK-LV 523

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           P  V +L  V     Q++  +S+     T ALT  G +Y  G+   GQLGI
Sbjct: 524 PTRV-ALVNVKPNFCQVACGHSL-----TVALTTKGHVYTMGSPVYGQLGI 568



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 19/247 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  
Sbjct: 414 LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRT 471

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P  +    
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVN 531

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL  +     VY++G  + G+LG   + D K P  +E ++L   
Sbjct: 532 VKPNFCQVACGHSLTVALTTKGH---VYTMGSPVYGQLGI-PQADGKLPICVE-WKLSES 586

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D     +A G
Sbjct: 587 FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACG 646

Query: 272 DYTTFVV 278
              T  +
Sbjct: 647 TNFTAAI 653



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 14/172 (8%)

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G + D   P+ +E   +L++Q +  A G  HAA+V + G + +WG    G LGHG +   
Sbjct: 293 GVKMDSLFPKSLESAVVLDVQNI--ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV 350

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
             PK+++AL++     VA G+Y T  V+  GD+Y++G G      +N    G GN+ ++ 
Sbjct: 351 LHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGT-----YNCGLLGHGNQVSHW 405

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 406 VPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGTFGALG 450


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 38/338 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q   G+    L +  G+V+ +G++  G   +G      ++ P+LVES+    V   
Sbjct: 257 LDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTD--ISRPKLVESISVTIVDFI 314

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           + G F T  +S  G +  F+WG+ +     LG+ T  +   P  + G LE + V+ +A G
Sbjct: 315 SCGEFHTCAISASGDL--FNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACG 372

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   +    S   +Y+ G G  G LGHG+R    +P+ +E   L   + + VA G WH
Sbjct: 373 SWHSALIT---STGRLYTFGDGTFGALGHGNRESSAYPKEVEA--LNGFRTIKVACGVWH 427

Query: 223 AAVVGQ----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A + +            ++ TWG G    LG G++E   +P  VQAL +     +A G 
Sbjct: 428 SAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQ 487

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G VY+ G  ++  LG N  +DG+         P LV   K  +E V +IS 
Sbjct: 488 NMTVALATSGHVYTMGSSDNGQLG-NPKSDGK--------QPCLVKD-KLAHELVEEISC 537

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                  AH   LT   ++Y +G G  G+LG   +N++
Sbjct: 538 G-----AAHVAVLTSRSEVYTWGMGANGRLGHGDLNDK 570



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 32/284 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V Q   G+   A+ +R+G V+T  WG +   RLGH T+  D+    L+ 
Sbjct: 248 PKPLESDVVLDVNQIVCGSRHIALTTRQGEVFT--WGEELGGRLGHGTD-TDISRPKLVE 304

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           ++    V  I+ G  +  A++     +  +  G    G LG+ +      P+ +    L 
Sbjct: 305 SISVTIVDFISCGEFHTCAISAS-GDLFNWGDGSYHAGLLGYDTGASHWLPKRVSG-PLE 362

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            LQ + VA G+WH+A++   GR+ T+G G +G LGHGN E  + PK V+ALN  + I VA
Sbjct: 363 GLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVA 422

Query: 270 TGDYTTFVVSE----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
            G + +  + E             +Y++G G+   L       GQG++ A  L P  V +
Sbjct: 423 CGVWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRL-------GQGDKEAR-LIPTCVQA 474

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           L + N    Q++   ++     T AL  SG +Y  G+ D GQLG
Sbjct: 475 LLEHN--FHQLACGQNM-----TVALATSGHVYTMGSSDNGQLG 511



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G+  + LI+  G++Y FG  +FG   +G + +     P+ VE+L     
Sbjct: 361 LEGLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAY--PKEVEALNGFRT 418

Query: 104 VQAAIGNFFTAVLSR----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +              ++YT+  G+  RLG   +   + P  +   LE+
Sbjct: 419 IKVACGVWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEH 478

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G    +ALA   +   VY++G    G+LG+  ++D K P L++  +L +   
Sbjct: 479 -NFHQLACGQNMTVALA---TSGHVYTMGSSDNGQLGN-PKSDGKQPCLVKD-KLAHELV 532

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ GA H AV+     V TWG G  G LGHG+   +  P +V+AL D     ++ G +
Sbjct: 533 EEISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGSN 592

Query: 273 YTTFV 277
           +TT +
Sbjct: 593 FTTCI 597


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ PK++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SP+L++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   L+ +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LVGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G+   ++  P+L++   L+ +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LVGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+L++   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLADI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        LL +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ PK++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SP+L++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGLDCKK-QASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 161/358 (44%), Gaps = 42/358 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + +   + G     LI+  G+V+ +G+ S G+  + V     V+SP++VES
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPKMVES 353

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND---ARLG-HHTEPNDVEPHPLLGTLEN 153
           L  + V   A G + T  L+  G +Y  +WG +   A LG      +   P  + G L  
Sbjct: 354 LDGVHVKSVACGEYQTCALTDSGELY--AWGENKYGANLGCEERSRSQWLPRRISGPLTG 411

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + ++ +A G  +   ++   S   +++ G G  G LGHG+      P+ +E  + L ++ 
Sbjct: 412 VCILNVACGDWHTAIVS---SSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKS 468

Query: 214 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           V  A G+WH A +           G  G++ TWG G  G LGH + E + +P  V  L +
Sbjct: 469 V--ACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE 526

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           +    V+ G   T  ++  G VY+ G      L         GN HA      +V    +
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQL---------GNPHAK--DKSIVIVEGK 575

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           + E  V+  +++  Y   H  ALT SG LY +G G  GQLG+    N  +R  P  V+
Sbjct: 576 LKEEFVK-EISSGSY---HVAALTSSGSLYTWGKGTNGQLGL---GNVEDRNFPTLVE 626



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 35/299 (11%)

Query: 80  EYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           ++G   TK V +  P+L+ES   + V   ++G    A++++ G V+ +  G+  +LGH  
Sbjct: 282 QFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKV 341

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-CGLGGKLGHGSRTD 196
           +  DV    ++ +L+ + V  +A G     AL    SG  +Y+ G    G  LG   R+ 
Sbjct: 342 D-MDVSSPKMVESLDGVHVKSVACGEYQTCALT--DSG-ELYAWGENKYGANLGCEERSR 397

Query: 197 EKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
            +  PR I    L  +  + VA G WH A+V   G++ T+G G +G LGHGN    S PK
Sbjct: 398 SQWLPRRISG-PLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPK 456

Query: 256 VVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQ 304
            V++L  +    VA G + T  + +            G ++++G G+   LGH  +    
Sbjct: 457 EVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKK- 515

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  L P  V  L +++    Q+S    +     T ALT +GK+Y  G+   GQLG
Sbjct: 516 -------LLPTCVAQLVELD--FDQVSCGRML-----TVALTNTGKVYTMGSSVHGQLG 560



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 33/272 (12%)

Query: 22  ERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           E   +   L R ++G       L G+ I+  A G   T ++S +GQ++ +G  SFG   +
Sbjct: 393 EERSRSQWLPRRISG------PLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGH 446

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA-----VLSR------EGRVYTFSWGND 130
           G      V+ P+ VESLK + V   A G++ TA     ++ R       G+++T+  G+ 
Sbjct: 447 G--NLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDK 504

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            RLGH      + P   +  L  +   Q++ G   +L +A   +G  VY++G  + G+LG
Sbjct: 505 GRLGHADLEKKLLP-TCVAQLVELDFDQVSCGR--MLTVALTNTG-KVYTMGSSVHGQLG 560

Query: 191 HGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +    D+       +L E+F         +++G++H A +   G + TWG G  G LG G
Sbjct: 561 NPHAKDKSIVIVEGKLKEEF------VKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLG 614

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           N E  + P +V+AL D++   +A G   T  +
Sbjct: 615 NVEDRNFPTLVEALRDMQVQSIACGSNLTAAI 646



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 25/295 (8%)

Query: 25  GKRNLLGREVN---GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           G R  LG +V+    +P    SL G+ +   A G  +T  ++D+G++YA+G++ +G    
Sbjct: 332 GSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLG 391

Query: 82  GVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH---- 136
             + ++    P+ +   L  + ++  A G++ TA++S  G+++T+  G+   LGH     
Sbjct: 392 CEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLS 451

Query: 137 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCGLGG 187
            ++P +VE      +L+ + V  +A G  +  A+             G  +++ G G  G
Sbjct: 452 VSQPKEVE------SLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKG 505

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LGH     +  P  + Q  L+ L    V+ G      +   G+V T G   +G LG+ +
Sbjct: 506 RLGHADLEKKLLPTCVAQ--LVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPH 563

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            + +S+  V   L +     +++G Y    ++  G +Y++G G +  LG   + D
Sbjct: 564 AKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVED 618



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 17/191 (8%)

Query: 175 GMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
           G+ V ++GC +  + G+    + D   P+L+E   +L++    ++ G  HAA++ + G V
Sbjct: 270 GVEVGNIGC-VDNQFGYHNTKQVDALLPKLLESTVMLDV--TNISLGRKHAALITKRGEV 326

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             WG G  G LGH  +   S PK+V++L+ V    VA G+Y T  +++ G++Y++G    
Sbjct: 327 FCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWG---E 383

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              G N    G   R  +   P      ++++  +  + + N    + HT  ++ SG+L+
Sbjct: 384 NKYGANL---GCEERSRSQWLP------RRISGPLTGVCILNVACGDWHTAIVSSSGQLF 434

Query: 353 AFGAGDKGQLG 363
            +G G  G LG
Sbjct: 435 TYGDGSFGVLG 445


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 32/330 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++G +    A G   T L++++G+++ FG + +G+   G+   K+ T P  V+ LK   V
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQ--LGIDEVKVSTRPCCVKKLKPEKV 90

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
              A G   T V +  G +YTF    D +LG    P+     P+    E      +AAG 
Sbjct: 91  KVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSN--CPVKVECEPRQYKALAAGA 148

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + +AL        +Y  G G  G+LG G   D+  P L+     +    + VA G +H 
Sbjct: 149 DHSVALT---DDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKV----ISVACGYYHT 201

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           A V   G V T+G G  G LG G +  ++V PK V      KA  VA G   T V++E G
Sbjct: 202 AFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTECG 259

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            VY+FG G +  LGH        N++    TP  +        +V QI+   +     HT
Sbjct: 260 KVYTFGEGGNGQLGHK-------NKYFYCETPVWL----NFKHKVTQIAAGEN-----HT 303

Query: 343 FALTESGKLYAFGAGDKGQLGI--ELVNNQ 370
             +TE G+LY FG G   +LG+  E  +NQ
Sbjct: 304 ALVTEKGQLYTFGDGRHAKLGLDHECYSNQ 333



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 27/143 (18%)

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + + G + T+G  R+G         +++P       D KA  VA GD  T +V+E G ++
Sbjct: 9   IPESGAIFTFGKSRFG---------DNLPNKFWVRGD-KAKSVACGDEHTALVTESGRLF 58

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +FG  +   LG + +          V T P  V  LK    +VV            HT  
Sbjct: 59  TFGVNDWGQLGIDEV---------KVSTRPCCVKKLKPEKVKVVACG-------RIHTIV 102

Query: 345 LTESGKLYAFGAGDKGQLGIELV 367
            TESG LY FGA   GQLG+E +
Sbjct: 103 ATESGCLYTFGANGDGQLGVEDI 125



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT-----ERGNPERVDI 381
           + HT  +TESG+L+ FG  D GQLGI+ V   T     ++  PE+V +
Sbjct: 45  DEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 46/348 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+++++G++S G   +GV+    V+ P+++++L    V   A G + 
Sbjct: 296 ACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYH 353

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +E +   P  + G +E I V  I+ G  +   
Sbjct: 354 TCAVTLSGDLYT--WGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAV 411

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG       PR +E   L  L+   VA G WH A   +
Sbjct: 412 VT---SAGQLFTFGDGSFGALGHGDHITSNFPREVE--TLRGLRTTKVACGVWHTAAAVE 466

Query: 229 ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                            ++ TWG G  G LGHG+ E   VP+ V AL + +   VA G+ 
Sbjct: 467 AINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGND 526

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G VY+ G      LG +A A+G+         P  V   +  N  V +++  
Sbjct: 527 LTVALTTAGRVYTMGSTAYGQLG-SATANGK--------LPTCVEG-EIANSFVEEVACG 576

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                + H   LT   ++Y +G G  GQLG     +   R  P  VD+
Sbjct: 577 -----SYHVAVLTSKNEVYTWGKGLNGQLGH---GDNNHRNTPTIVDV 616



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 41/298 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++R+G +  FSWG ++  RLGH  E  DV    ++ 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEI--FSWGEESGGRLGHGVEA-DVSHPKIID 337

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           TL    V  +A G  +  A+        +Y+ G G    G LGHGS      P+ +   Q
Sbjct: 338 TLSGTNVELVACGEYHTCAVTLSGD---LYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-Q 393

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           +  ++   ++ GAWH AVV   G++ T+G G +G LGHG+    + P+ V+ L  ++   
Sbjct: 394 MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTK 453

Query: 268 VATGDYTTFV-------VSEDG--------DVYSFGCGESASLGHNAIADGQGNRHANVL 312
           VA G + T         +S+ G         +Y++G G+   LGH       G+     L
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGH-------GDNEPR-L 505

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            P+ V +L  + ER+ Q++  N +     T ALT +G++Y  G+   GQLG    N +
Sbjct: 506 VPECVAAL--IEERICQVACGNDL-----TVALTTAGRVYTMGSTAYGQLGSATANGK 556



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 23/250 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GIR+   + GA  T +++ AGQ++ FG  SFG   +G   T     P+ VE+L+ +  
Sbjct: 394 MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITS--NFPREVETLRGLRT 451

Query: 104 VQAAIGNFFTAV-------LSREG--------RVYTFSWGNDARLGHHTEPNDVEPHPLL 148
            + A G + TA        LS  G        ++YT+  G+  RLGH      + P  + 
Sbjct: 452 TKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVA 511

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             +E   + Q+A G    +AL    +   VY++G    G+LG  +  + K P  +E  ++
Sbjct: 512 ALIEE-RICQVACGNDLTVALT---TAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEG-EI 565

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            N     VA G++H AV+     V TWG G  G LGHG+    + P +V  L D +  +V
Sbjct: 566 ANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNV 625

Query: 269 ATGDYTTFVV 278
           A G   T V+
Sbjct: 626 ACGSKFTVVI 635



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           +G +    S+ D   P+ +E   +L++  +  A G  HA +V + G + +WG    G LG
Sbjct: 266 VGSQCSLNSKLDALLPKALESTVVLDVHGI--ACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           HG E   S PK++  L+      VA G+Y T  V+  GD+Y++G G      HN    G 
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGT-----HNYGLLGH 378

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           G+  ++ + PQ V    +     +++S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 379 GSEVSHWI-PQKVGGQME----GIRVSYISCGAW--HTAVVTSAGQLFTFGDGSFGALG 430


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 158/343 (46%), Gaps = 42/343 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q A G     L++  G+V+ +G++S G   +G +     + P+LVE
Sbjct: 255 TPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FSCPRLVE 312

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
            L    V   A G + T  ++  G +YT  WG+  R    LG  T+ +   P  + G LE
Sbjct: 313 FLAVTNVDFVACGEYHTCAVTTSGDLYT--WGDGTRNAGLLGQGTDVSHWIPKRVSGPLE 370

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + V  IA G  +  ALA   S   +++ G G  G LGHG R     P+   + QLL+ L
Sbjct: 371 GLQVFSIACG-TWHSALAT--SNGKLFTFGDGAFGVLGHGDRESLSFPK---EVQLLSGL 424

Query: 212 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + + VA G WH A    V+ Q G      ++ TWG G    LGHG+++   +P  V +L 
Sbjct: 425 KTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLI 484

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           D     +A G   T  ++  G V++ G      LG N  +DG+         P LV    
Sbjct: 485 DYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG-NPASDGK--------MPTLVQD-S 534

Query: 322 QVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
            V E V ++S        AH  A LT   +LY +G G  G+LG
Sbjct: 535 LVGEFVEEVSC------GAHHVAVLTSRSELYTWGKGANGRLG 571



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 32/287 (11%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V +P+ +ES   + V Q A G    A+++R+G V+T  WG ++  RLGH  E +   P  
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFT--WGEESGGRLGHGFETDFSCPR- 309

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+  L    V  +A G  +  A+      +  +  G    G LG G+      P+ +   
Sbjct: 310 LVEFLAVTNVDFVACGEYHTCAVTTS-GDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSG- 367

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  LQ   +A G WH+A+   +G++ T+G G +G LGHG+ E  S PK VQ L+ +K I
Sbjct: 368 PLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTI 427

Query: 267 HVATGDYTTF----VVSEDG------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            VA G + T     V+S+ G       ++++G G+   LGH +            L P  
Sbjct: 428 KVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGS--------KDTYLLPTC 479

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V+SL   N    QI+   ++     T ALT SG ++  G    GQLG
Sbjct: 480 VSSLIDYN--FHQIACGQTL-----TVALTTSGHVFTMGGTAHGQLG 519



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 128/245 (52%), Gaps = 19/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   A G   + L +  G+++ FG  +FG   +G + +  ++ P+ V+ L  +  
Sbjct: 369 LEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRES--LSFPKEVQLLSGLKT 426

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + TA    V+S+ G      +++T+  G+  RLGH ++   + P   + +L +
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLP-TCVSSLID 485

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               QIA G    +AL    SG  V+++G    G+LG+ + +D K P L+ Q  L+    
Sbjct: 486 YNFHQIACGQTLTVALTT--SGH-VFTMGGTAHGQLGNPA-SDGKMPTLV-QDSLVGEFV 540

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             V+ GA H AV+     + TWG G  G LGHG+ E    P +V+AL D    +++ G +
Sbjct: 541 EEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSN 600

Query: 273 YTTFV 277
           +TT +
Sbjct: 601 FTTSI 605


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 166/369 (44%), Gaps = 43/369 (11%)

Query: 28  NLLGRE--VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           ++LG E      P    S + + +   A G     +I+  G+VY +G  S G  +  V  
Sbjct: 241 SMLGSEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNV 300

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LGHHTE---PND 141
               + P++VESL ++ V   A G+  T  ++  G +  F WG  A  LG   +    N 
Sbjct: 301 N--ASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL--FEWGEGAHSLGLMNDWYGRNQ 356

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             PH  LG ++NI V +IA G  +   +    S   +++ G G  G LGHG       P+
Sbjct: 357 WFPHKFLGPMDNISVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDTQGVARPK 413

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECE 251
            +E  +   ++ V  A G WH A +             G++ TWG    G LGH + + +
Sbjct: 414 EVESLKGSRVKSV--ACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 471

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
            +P  V +L     I V+ G   T V++  G V++ G      LG N  ADG+     +V
Sbjct: 472 LLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGES--ICSV 528

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
             P     LK   E V +IS  +S     H   LT SGK++ +G G +GQLG+    + +
Sbjct: 529 EGP-----LK--TEFVREISSGSS-----HVAVLTMSGKVFTWGKGAEGQLGL---GDYS 573

Query: 372 ERGNPERVD 380
            R +P  V+
Sbjct: 574 NRSSPTLVE 582



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 20/235 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +  I + + A G   T +I+ +GQ++ +G  +FG   +G   T+ V  P+ VESLK   V
Sbjct: 366 MDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 423

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +          +  G+++T+   +  +LGH      + P   + +L  
Sbjct: 424 KSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP-TCVDSLTA 482

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++Q++ G    + +    +GM V+++G    G+LG+     E    +    +   ++ 
Sbjct: 483 YDLIQVSCGT--AVTVVLTVTGM-VFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVRE 539

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAI 266
           +  ++G+ H AV+   G+V TWG G  G LG G+    S P +V+AL   DV+++
Sbjct: 540 I--SSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 592



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 28/237 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD----------AGQVYAFGKDSFGEAEYGVQGTK 87
           P    SL+G R+   A G   T  I +          +G+++ +G    G+  +  +  K
Sbjct: 412 PKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 471

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L+  P  V+SL    ++Q + G   T VL+  G V+T       +LG+  + +      +
Sbjct: 472 LL--PTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGN-PKADGESICSV 528

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            G L+   V +I++G  ++  L    SG  V++ G G  G+LG G  ++   P L+E  +
Sbjct: 529 EGPLKTEFVREISSGSSHVAVLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585

Query: 208 LLNLQPVV-----VAAGAWHAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 252
             +++ VV      AA   H  +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 586 GRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 5/146 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK     R++   P    SL    +IQ + G   T++++  G V+  G    G+      
Sbjct: 461 GKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKA 520

Query: 85  GTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             + + S   VE  LK  FV + + G+   AVL+  G+V+T+  G + +LG     N   
Sbjct: 521 DGESICS---VEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSS 577

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLAL 169
           P  L+  LE   V  +  G+ +  A+
Sbjct: 578 P-TLVEALEGRDVESVVCGFNFTAAI 602


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 166/369 (44%), Gaps = 43/369 (11%)

Query: 28  NLLGRE--VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           ++LG E      P    S + + +   A G     +I+  G+VY +G  S G  +  V  
Sbjct: 241 SMLGSEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNV 300

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LGHHTE---PND 141
               + P++VESL ++ V   A G+  T  ++  G +  F WG  A  LG   +    N 
Sbjct: 301 N--ASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL--FEWGEGAHSLGLMNDWYGRNQ 356

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             PH  LG ++NI V +IA G  +   +    S   +++ G G  G LGHG       P+
Sbjct: 357 WFPHKFLGPMDNISVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDTQGVARPK 413

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECE 251
            +E  +   ++ V  A G WH A +             G++ TWG    G LGH + + +
Sbjct: 414 EVESLKGSRVKSV--ACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 471

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
            +P  V +L     I V+ G   T V++  G V++ G      LG N  ADG+     +V
Sbjct: 472 LLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGESI--CSV 528

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
             P     LK   E V +IS  +S     H   LT SGK++ +G G +GQLG+    + +
Sbjct: 529 EGP-----LK--TEFVREISSGSS-----HVAVLTMSGKVFTWGKGAEGQLGL---GDYS 573

Query: 372 ERGNPERVD 380
            R +P  V+
Sbjct: 574 NRSSPTLVE 582



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 20/235 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +  I + + A G   T +I+ +GQ++ +G  +FG   +G   T+ V  P+ VESLK   V
Sbjct: 366 MDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 423

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +          +  G+++T+   +  +LGH      + P   + +L  
Sbjct: 424 KSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP-TCVDSLTA 482

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++Q++ G    + +    +GM V+++G    G+LG+     E    +    +   ++ 
Sbjct: 483 YDLIQVSCGT--AVTVVLTVTGM-VFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVRE 539

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAI 266
           +  ++G+ H AV+   G+V TWG G  G LG G+    S P +V+AL   DV+++
Sbjct: 540 I--SSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 592



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 28/237 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD----------AGQVYAFGKDSFGEAEYGVQGTK 87
           P    SL+G R+   A G   T  I +          +G+++ +G    G+  +  +  K
Sbjct: 412 PKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 471

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L+  P  V+SL    ++Q + G   T VL+  G V+T       +LG+  + +      +
Sbjct: 472 LL--PTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGN-PKADGESICSV 528

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            G L+   V +I++G  ++  L    SG  V++ G G  G+LG G  ++   P L+E  +
Sbjct: 529 EGPLKTEFVREISSGSSHVAVLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585

Query: 208 LLNLQPVV-----VAAGAWHAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 252
             +++ VV      AA   H  +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 586 GRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSS 642



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 5/146 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK     R++   P    SL    +IQ + G   T++++  G V+  G    G+      
Sbjct: 461 GKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKA 520

Query: 85  GTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             + + S   VE  LK  FV + + G+   AVL+  G+V+T+  G + +LG     N   
Sbjct: 521 DGESICS---VEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSS 577

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLAL 169
           P  L+  LE   V  +  G+ +  A+
Sbjct: 578 P-TLVEALEGRDVESVVCGFNFTAAI 602


>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
 gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
          Length = 423

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)

Query: 52  AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 111
           A+ G    ++++    +Y+ GK S+G      +   L   P+ +E+LKN  ++  + G  
Sbjct: 81  ASLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYE 140

Query: 112 FTAVLSREGRVYTFSWGNDAR---------------LGHHTEPNDVEPHPLLGTLENIPV 156
            + V + +G    FSWG   +               + + ++P  ++      T  NI  
Sbjct: 141 HSIVTTDKG---LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSD--STFRNIK- 194

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPV 214
            ++ +G  + L L    +   VYS G G  G  G G + +   P  I QF  +L N   +
Sbjct: 195 -KVCSGSDHSLVLNKDGT---VYSWGHGYFGATGLGKKDNVATPTKI-QFNKELENKLVL 249

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIH-VATG 271
            +A G +H+ ++  D  + ++GWG YG LGH   + ++   PK ++++N    I  V  G
Sbjct: 250 DIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAG 309

Query: 272 DY-TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            + T+F V E GDVYS+G GE  +LG     D Q     NV  P  V SL  + +     
Sbjct: 310 SHATSFYVDEKGDVYSWGWGEGGTLG---FGDNQ-----NVYVPTQVKSLSNIKKIAAGF 361

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     HT ALT   ++Y FG    GQLG
Sbjct: 362 ---------KHTLALTNDNQVYVFGDNTFGQLG 385



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 23/293 (7%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--- 88
           +++   P    +L+   II  ++G   +++ +D G ++++G+   G+   G   +++   
Sbjct: 115 KDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKG-LFSWGRSDKGQLANGELKSEIKDQ 173

Query: 89  ---VTSPQLVESLKNIF--VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
               + PQ +++  + F  + +   G+  + VL+++G VY++  G     G   + N   
Sbjct: 174 INYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKKDNVAT 233

Query: 144 PHPLL--GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-- 199
           P  +     LEN  V+ IA G  + L L    S   +YS G G  G+LGH S  D K+  
Sbjct: 234 PTKIQFNKELENKLVLDIACGGYHSLILT---SDNEIYSFGWGEYGQLGH-SENDTKNYY 289

Query: 200 -PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+ IE          V A     +  V + G V +WGWG  G LG G+ +   VP  V+
Sbjct: 290 SPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVPTQVK 349

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---HNAIADGQGNRH 308
           +L+++K I  A G   T  ++ D  VY FG      LG   +N   D Q +  
Sbjct: 350 SLSNIKKI--AAGFKHTLALTNDNQVYVFGDNTFGQLGSKQNNVFEDPQNDNQ 400


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 73/358 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGH---NAIAD----------------------------------------GQG 305
            G++  LGH   N +                                          G G
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCG 647

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  A  L P+L+  L     R+V IS+ +S     H  AL+   ++YA+G    GQ G
Sbjct: 648 SSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + V    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 27/310 (8%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4061 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4118

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-------LGTLE 152
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +       +G   
Sbjct: 4119 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAR 4178

Query: 153  NIPVV-QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            N  ++  +A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + +
Sbjct: 4179 NKSIICSVACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGI 4236

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + V  A G   +  + +DG+V T+G  R   L  G     + P+ V  L  V    VA G
Sbjct: 4237 KKV--ACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVG 4294

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQI 330
               T  ++  GD+Y++G      LG           H N V  P LVT L+  N R +  
Sbjct: 4295 AEHTLALTSTGDIYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISA 4345

Query: 331  SLTNSIYWNA 340
               +S  W A
Sbjct: 4346 GRCHSAAWTA 4355



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 23/210 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4035 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4094

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4095 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4152

Query: 298  NAIADGQGNRHANVLTPQLVTSLK-----QVNERVVQISLTNSIYWNAHTFALTESGKL- 351
                 G GN  +N   P+ VT+L+     Q   + +  S+   +    HT A++  G + 
Sbjct: 4153 -----GLGNT-SNKKLPERVTALEGYQIGQARNKSIICSVACGL---NHTLAVSADGSMV 4203

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            +AFG GD G+LG+    N T + +P++VD+
Sbjct: 4204 WAFGDGDYGKLGL---GNSTAKSSPQKVDV 4230



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 32/333 (9%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4074

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4075 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4132

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF------QLLNLQPVV-VAAGA 220
              A   S   +++ G G  G+LG G+ +++K P  +         Q  N   +  VA G 
Sbjct: 4133 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGL 4190

Query: 221  WHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             H   V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  ++
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            +DG VY+F  G+   +G   + +G+   H     PQ V  L  V    V +         
Sbjct: 4251 KDGQVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------A 4295

Query: 340  AHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
             HT ALT +G +YA+G+  +GQLG+   N+  E
Sbjct: 4296 EHTLALTSTGDIYAWGSNSEGQLGLGHTNHVRE 4328



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               L+L    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLSLT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    V+ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAG 726



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  GQVY FG+D       G  
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRA 4271

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  + +   A+G   T  L+  G +Y  +WG+++     LGH    N
Sbjct: 4272 RNH--NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIY--AWGSNSEGQLGLGH---TN 4324

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 4325 HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPP 4357



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + Q++AG  + LA    P    V
Sbjct: 715 LDGIAIQQVSAGTSHSLAWTALPRDRQV 742


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 168/335 (50%), Gaps = 18/335 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G+ I     G+   + +  +G++ ++G+   G+   G       ++P +++ 
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQ--LGHASFSHSSTPSIIDE 157

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  V + A G  F+A L   G++YT+      +LG     +   P  +L ++ +  V 
Sbjct: 158 LASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPR-MLPSMNHRHVH 216

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH---PRLIEQFQLLNLQPV 214
            +A G  +++ L    +   VY+ G    G+LGHG R  +KH   P+ +     L+++ +
Sbjct: 217 LMACGAAHIVVLT---TSRDVYTWGNNSYGQLGHGFR--KKHCLQPKSVRVMSGLDIKQI 271

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDY 273
           V  AG  H+ V+   G + TWG G +G LGHG+ E + +P ++  L+   +A  + +G  
Sbjct: 272 V--AGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGAD 329

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRH-ANVLTPQLVTSLKQVNERVVQIS 331
               ++  G VYS+G      LGH   +   + NR  ++V++P+++ S    +E    IS
Sbjct: 330 FIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKII-SFFAASEEHDAIS 388

Query: 332 LTNSIYWNAHTFALTESGK-LYAFGAGDKGQLGIE 365
           L++    + H  A+TE    L+A+G G+ GQLG++
Sbjct: 389 LSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLD 423



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 52/358 (14%)

Query: 35  NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           + TP     L   R+ + A G   +  + + GQ+Y +G + +G+   G + +  +  P++
Sbjct: 149 SSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAI--PRM 206

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           + S+ +  V   A G     VL+    VYT  WGN++  +LGH            +  + 
Sbjct: 207 LPSMNHRHVHLMACGAAHIVVLTTSRDVYT--WGNNSYGQLGHGFRKKHCLQPKSVRVMS 264

Query: 153 NIPVVQIAAG---YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            + + QI AG    C + +         +Y+ G G  G+LGHG    +  P L+      
Sbjct: 265 GLDIKQIVAGENHSCVMTSFG------DIYTWGRGDFGQLGHGDMESKDIPTLLSPLD-P 317

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES----------VPKVVQ- 258
             Q  ++ +GA     +   G V +WG   +G LGHG +   S           PK++  
Sbjct: 318 KTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISF 377

Query: 259 --ALNDVKAIHVAT---GDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVL 312
             A  +  AI +++   G +    ++E  D ++++G GE   LG     D +      + 
Sbjct: 378 FAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLG----LDPRDTSFRPI- 432

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-------KLYAFGAGDKGQLG 363
            PQ V  +K +      I L  +   N      T  G       K++++G G  GQLG
Sbjct: 433 -PQEVKKMKGM------IVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLG 483



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 37/297 (12%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R  +  P    S+    +   A GA   ++++ +  VY +G +S+G+  +G +  K    
Sbjct: 198 RTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFR-KKHCLQ 256

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGT 150
           P+ V  +  + + Q   G   + V++  G +YT+  G+  +LGH   E  D+    LL  
Sbjct: 257 PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIP--TLLSP 314

Query: 151 LENIPVVQ---IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR----------TDE 197
           L+  P  Q   I +G  +++A+    SG AVYS G    G+LGHG            +D 
Sbjct: 315 LD--PKTQASLIVSGADFIMAMTY--SG-AVYSWGRNCFGQLGHGVDMHYSKSNRFPSDV 369

Query: 198 KHPRLIEQFQLLNLQPVV----VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEEC-- 250
             P++I  F        +    ++ G+ H  A+  +   +  WG G +G LG    +   
Sbjct: 370 ISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSF 429

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSE--------DGDVYSFGCGESASLGHNA 299
             +P+ V+ +  +  +  A  +  + VV+         D  V+S+G G    LG+ +
Sbjct: 430 RPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGS 486



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           HG  +     R  E   L  L   ++  G+ H   +   G++ +WG G  G LGH +   
Sbjct: 89  HGRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSH 148

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
            S P ++  L   +   VA G   +  + E G +Y++GC     L       GQG+R ++
Sbjct: 149 SSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQL-------GQGDRTSS 201

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + P+++ S+   N R V +    +    AH   LT S  +Y +G    GQLG
Sbjct: 202 AI-PRMLPSM---NHRHVHLMACGA----AHIVVLTTSRDVYTWGNNSYGQLG 246



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 36/249 (14%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R + G+ I Q  AG   + +++  G +Y +G+  FG+  +G   +K +  P L+  
Sbjct: 257 PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDI--PTLLSP 314

Query: 98  LKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDA--RLGHHTE---------PNDVE 143
           L      QA++   G  F   ++  G VY  SWG +   +LGH  +         P+DV 
Sbjct: 315 LDP--KTQASLIVSGADFIMAMTYSGAVY--SWGRNCFGQLGHGVDMHYSKSNRFPSDVI 370

Query: 144 PHPLLGTL------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
              ++         + I +  I+ G  ++LA+  +     +++ G G  G+LG   R   
Sbjct: 371 SPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKD--TLFAWGRGEHGQLGLDPRDTS 428

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ--------DGRVCTWGWGRYGCLGHGNEE 249
             P   E  ++  +  +  A    H+ VV          D +V +WG G +G LG+G+ +
Sbjct: 429 FRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSGK 488

Query: 250 CESVPKVVQ 258
              + + VQ
Sbjct: 489 VPVMKETVQ 497


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 73/358 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGH---NAIAD----------------------------------------GQG 305
            G++  LGH   N +                                          G G
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCG 647

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  A  L P+L+  L     R+V IS+ +S     H  AL+   ++YA+G    GQ G
Sbjct: 648 SSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4067 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4124

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4125 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4183

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4184 ACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4239

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4240 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4299

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4300 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4350

Query: 339  NA 340
             A
Sbjct: 4351 TA 4352



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4080

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4138

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4139 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4194

Query: 228  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4195 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4254

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4255 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4299

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4300 STGDVYAWGSNSEGQLGLGHTNHVRE 4325



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4041 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4101 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4158

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4159 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4205

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4206 GDYGKLGL---GNSTAKSSPQKVDV 4227



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               L+L    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLSLT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4117 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4176

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4177 GYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4236

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4237 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4288

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4289 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4343

Query: 220  AWHAA 224
              H+A
Sbjct: 4344 RCHSA 4348



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4209 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4268

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4269 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4321

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4322 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4354



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 73/358 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGH---NAIAD----------------------------------------GQG 305
            G++  LGH   N +                                          G G
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCG 647

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  A  L P+L+  L     R+V IS+ +S     H  AL+   ++YA+G    GQ G
Sbjct: 648 SSEATALRPKLIEELAAT--RIVDISIGDS-----HCLALSHDNEVYAWGNNSMGQCG 698



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  +   G+V  WG G   CLG G+ E  ++ PK+++ L   + + ++ GD     +S D
Sbjct: 626 SLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            +VY++G   + S+G      GQGN    +  P+ V+ L  +  + +    ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 4060 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4117

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 4118 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4176

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 4177 ACGLNHTLAVSA--DGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 4232

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 4233 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4292

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 4293 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 4343

Query: 339  NA 340
             A
Sbjct: 4344 TA 4345



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4073

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4131

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 4132 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4187

Query: 228  QDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG V   +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 4188 ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 4247

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 4248 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 4292

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 4293 STGDVYAWGSNSEGQLGLGHTNHVRE 4318



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 4034 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 4094 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4151

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G  ++AFG 
Sbjct: 4152 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSVVWAFGD 4198

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 4199 GDYGKLGL---GNSTAKSSPQKVDV 4220



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
               L+L    S   VY+ GC  G  LG G S      P+LIE+     +  V ++ G  
Sbjct: 623 SQSSLSLT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDISIGDS 675

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           H   +  D  V  WG    G  G GN     + PK V  L+ +    ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 4110 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4169

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 4170 GYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 4229

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 4230 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 4281

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 4282 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 4336

Query: 220  AWHAA 224
              H+A
Sbjct: 4337 RCHSA 4341



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 4202 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4261

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 4262 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 4314

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 4315 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 4347



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG+  ++ ++  GQVYA+G  +    G +E     T L   P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           +E L    +V  +IG+     LS +  VY  +WGN++      G+ T P   +P  + G 
Sbjct: 659 IEELAATRIVDISIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
           L+ I + QI+AG  + LA    P    V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 166/369 (44%), Gaps = 43/369 (11%)

Query: 28  NLLGRE--VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           ++LG E      P    S + + +   A G     +I+  G+VY +G  S G  +  V  
Sbjct: 242 SMLGSEDIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNV 301

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LGHHTE---PND 141
               + P++VESL ++ V   A G+  T  ++  G +  F WG  A  LG   +    N 
Sbjct: 302 N--ASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL--FEWGEGAHSLGLMNDWYGRNQ 357

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             PH  LG ++NI V +IA G  +   +    S   +++ G G  G LGHG       P+
Sbjct: 358 WFPHKFLGPMDNISVSKIACGEWHTAIIT---SSGQLFTYGDGTFGVLGHGDTQGVARPK 414

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECE 251
            +E  +   ++ V  A G WH A +             G++ TWG    G LGH + + +
Sbjct: 415 EVESLKGSRVKSV--ACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 472

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
            +P  V +L     I V+ G   T V++  G V++ G      LG N  ADG+     +V
Sbjct: 473 LLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLG-NPKADGES--ICSV 529

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
             P     LK   E V +IS  +S     H   LT SGK++ +G G +GQLG+    + +
Sbjct: 530 EGP-----LK--TEFVREISSGSS-----HVAVLTMSGKVFTWGKGAEGQLGL---GDYS 574

Query: 372 ERGNPERVD 380
            R +P  V+
Sbjct: 575 NRSSPTLVE 583



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 20/235 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +  I + + A G   T +I+ +GQ++ +G  +FG   +G   T+ V  P+ VESLK   V
Sbjct: 367 MDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 424

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +          +  G+++T+   +  +LGH      + P   + +L  
Sbjct: 425 KSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLP-TCVDSLTA 483

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             ++Q++ G    + +    +GM V+++G    G+LG+     E    +    +   ++ 
Sbjct: 484 YDLIQVSCGT--AVTVVLTVTGM-VFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVRE 540

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAI 266
           +  ++G+ H AV+   G+V TWG G  G LG G+    S P +V+AL   DV+++
Sbjct: 541 I--SSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESV 593



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 28/237 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD----------AGQVYAFGKDSFGEAEYGVQGTK 87
           P    SL+G R+   A G   T  I +          +G+++ +G    G+  +  +  K
Sbjct: 413 PKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK 472

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L+  P  V+SL    ++Q + G   T VL+  G V+T       +LG+  + +      +
Sbjct: 473 LL--PTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGN-PKADGESICSV 529

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
            G L+   V +I++G  ++  L    SG  V++ G G  G+LG G  ++   P L+E  +
Sbjct: 530 EGPLKTEFVREISSGSSHVAVLTM--SG-KVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 586

Query: 208 LLNLQPVV-----VAAGAWHAAVVGQDGRVCT-----WGWGR--YGCLGHGNEECES 252
             +++ VV      AA   H  +  +D  VC+     +G+ R  + C   G+  C S
Sbjct: 587 GRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSS 643



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 5/146 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK     R++   P    SL    +IQ + G   T++++  G V+  G    G+      
Sbjct: 462 GKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKA 521

Query: 85  GTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             + + S   VE  LK  FV + + G+   AVL+  G+V+T+  G + +LG     N   
Sbjct: 522 DGESICS---VEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSS 578

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLAL 169
           P  L+  LE   V  +  G+ +  A+
Sbjct: 579 P-TLVEALEGRDVESVVCGFNFTAAI 603


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 93/335 (27%), Positives = 158/335 (47%), Gaps = 36/335 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQ 105
           I   ++G+  +  +++ G VY +G+ S       V G   +     P  +ESL +I VV 
Sbjct: 636 ICSISSGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV- 694

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            +IG + +A +   G + T+  G + +LGH    N VEP  ++ +L +  + Q+  G  +
Sbjct: 695 -SIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPK-VIQSLTSFWITQVQCGEKH 752

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            +   C      VY+ G    G+LG G  T    P  +   +  N+  + +A+G+ H AV
Sbjct: 753 TI---CLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNV--LQIASGSTHCAV 807

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           +     V  +G G       G     S+P +V +L  +    +  G Y+T  +SE GDVY
Sbjct: 808 LTNSKEVLVFGNGA----AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVY 863

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G G+   LGH       GN      TP+LV +L+  N+ + QIS         HT  L
Sbjct: 864 TWGTGQE--LGH-------GNNQTES-TPKLVEALR--NQSIRQISCGGR-----HTAFL 906

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           T+SG+++  G    GQLG    +   ++  P++++
Sbjct: 907 TDSGRIFTSGKDSFGQLG----HQAGDQNKPKKIE 937



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 16/262 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   SL  I ++  + G   +  +   G++  +G    G+  +G   T+    P++++S
Sbjct: 682 PIKLESLTDIVVV--SIGFYHSAAVRANGELLTWGVGEEGQLGHG--DTQNQVEPKVIQS 737

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L + ++ Q   G   T  L++ G+VYT+      +LG        +P P+   LE   V+
Sbjct: 738 LTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTA-LEKYNVL 796

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           QIA+G  +  A+      + V+  G  +G      + +    P L+   + L++  +   
Sbjct: 797 QIASGSTHC-AVLTNSKEVLVFGNGAAMG------AASIISIPTLVPSLKYLHIDKL--C 847

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G +  A + + G V TWG G+   LGHGN + ES PK+V+AL +     ++ G   T  
Sbjct: 848 CGHYSTAAISECGDVYTWGTGQE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAF 905

Query: 278 VSEDGDVYSFGCGESASLGHNA 299
           +++ G +++ G      LGH A
Sbjct: 906 LTDSGRIFTSGKDSFGQLGHQA 927



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 25/187 (13%)

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG- 241
           C LG K+    ++ +  P  +  F + ++    +++G++++A + ++G V  WG G    
Sbjct: 609 CKLGFKVASKEQS-QPTPERLPNFNVSDI--CSISSGSYYSAALTENGDVYMWGRGSVKN 665

Query: 242 ----CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
                LG    E + +P  +++L D+  + V+ G Y +  V  +G++ ++G GE   LGH
Sbjct: 666 PPVPVLGIPQIEDQLLPIKLESLTDI--VVVSIGFYHSAAVRANGELLTWGVGEEGQLGH 723

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
               D Q     N + P+++ SL       VQ           HT  LT++GK+Y +G+ 
Sbjct: 724 ---GDTQ-----NQVEPKVIQSLTSFWITQVQCG-------EKHTICLTKNGKVYTWGSS 768

Query: 358 DKGQLGI 364
           + GQLG+
Sbjct: 769 EYGQLGL 775



 Score = 45.4 bits (106), Expect = 0.051,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 27/148 (18%)

Query: 234 TWGWGRYGCLGH---GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           TWG      LG      E+ +  P+ +   N      +++G Y +  ++E+GDVY +G G
Sbjct: 602 TWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRG 661

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI---SLTNSIYWNA---HTFA 344
              +                   P  V  + Q+ ++++ I   SLT+ +  +    H+ A
Sbjct: 662 SVKN------------------PPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGFYHSAA 703

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +  +G+L  +G G++GQLG     NQ E
Sbjct: 704 VRANGELLTWGVGEEGQLGHGDTQNQVE 731



 Score = 40.4 bits (93), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVT 90
           +   TP    +L+   I Q + G   T  ++D+G+++  GKDSFG+   + G Q      
Sbjct: 877 QTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQ-----N 931

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY--TFSW 127
            P+ +ESL     +  + G  +   L    R +   F W
Sbjct: 932 KPKKIESLTKTTFISVSCGENYNIALFDTTRSFRDKFCW 970


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 157/361 (43%), Gaps = 44/361 (12%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           I+NER  + ++        P    S   + +   A G     +++  G+VY +G+   G 
Sbjct: 280 IVNERFVQNSIYSL----VPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR 335

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
              G +    ++SP++V++L +I V   A G + T  L+  G VY  +WGND       +
Sbjct: 336 --LGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVY--AWGNDVSCSDLVD 391

Query: 139 PNDVEP----HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
              +      H L   +E I +  IA G  +   ++   S   +++ G G  G LGHGS 
Sbjct: 392 EGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGSY 448

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCL 243
                P+ +E  + L ++ V  A G WH A +              G++ TWG    G L
Sbjct: 449 HSFSSPKEVESLKGLCVRSV--ACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRL 506

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GH +   + VP  V  L D   + V+ G   T  ++  G V++ G  +   LG+  + D 
Sbjct: 507 GHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD- 565

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                A V+       LKQ  E V  IS       + H   LT SG +Y +G G+ G+LG
Sbjct: 566 ----RAVVVEGM----LKQ--EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELG 610

Query: 364 I 364
           +
Sbjct: 611 L 611



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 22/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI I   A G   T ++S  G+++ +G  +FG   +G   +   +SP+ VESLK + V
Sbjct: 408 VEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHS--FSSPKEVESLKGLCV 465

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
              A G + TA +           +  G+++T+   ++ RLGH    N + P   +  L 
Sbjct: 466 RSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLV 524

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +   VQ++ G    LAL    +   V+++G    G+LG+    D    R +    +L  +
Sbjct: 525 DYDFVQVSCGRMMTLALT---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQE 577

Query: 213 PV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            V +++ G++H AV+   G V TWG G  G LG G+ E    P  V+AL D +   +  G
Sbjct: 578 YVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCG 637

Query: 272 DYTTFVV 278
              T  +
Sbjct: 638 PSFTVAI 644


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 147/334 (44%), Gaps = 43/334 (12%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G     L++  G+++ +G+DS G   +G    K    P+LV+SL    V   A G + T 
Sbjct: 271 GVSHIALVTRQGEIFTWGEDSGGRLGHGFD--KDYGKPRLVDSLAITSVSFVACGEYHTC 328

Query: 115 VLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
            +S  G +YT  WG    N   LGH T+ +   P  + G LE   VV IA G  +   + 
Sbjct: 329 AVSISGDLYT--WGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALIT 386

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQ- 228
              S   +++ G G  G LGHG R    +P+   + QLL+  + V VA G WH A + + 
Sbjct: 387 ---SNGKLFTFGDGTLGVLGHGDRESVAYPK---ELQLLSGHKAVKVACGVWHTAAIIEV 440

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                         ++ TWG G    LGH N+E    P  V AL D   + VA G   T 
Sbjct: 441 NDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTV 500

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G V++ G      LG N  +DG+         P LV    Q  E V +IS     
Sbjct: 501 ALTASGHVFTMGSKAYGQLG-NPTSDGK--------VPILVRDKLQ-GETVEEISCGTH- 549

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
               H   LT   +LY +G G  G+LG   + +Q
Sbjct: 550 ----HVAVLTSRSELYTWGRGANGRLGHGDIEDQ 579



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 38/314 (12%)

Query: 66  GQVYAFGKDSFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
           G+V+A G  S G  ++   +   L+  P   + + ++  ++  + +   A+++R+G ++T
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHI--ALVTRQGEIFT 286

Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
             WG D+  RLGH  + +  +P  L+ +L    V  +A G  +  A++     +  +  G
Sbjct: 287 --WGEDSGGRLGHGFDKDYGKPR-LVDSLAITSVSFVACGEYHTCAVSIS-GDLYTWGDG 342

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
               G LGHG+      P+ +    L   Q V +A GAWH A++  +G++ T+G G  G 
Sbjct: 343 THNAGILGHGTDVSHSIPKRVTG-PLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGV 401

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------------VYSFGC 289
           LGHG+ E  + PK +Q L+  KA+ VA G + T  + E  D             ++++G 
Sbjct: 402 LGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGD 461

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G+   LGH        N+    L P  V +L   N   +Q++  +S+     T ALT SG
Sbjct: 462 GDQYRLGH-------ANKET-YLQPTCVAALADYN--FLQVACGHSL-----TVALTASG 506

Query: 350 KLYAFGAGDKGQLG 363
            ++  G+   GQLG
Sbjct: 507 HVFTMGSKAYGQLG 520



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G +++  A GA  T LI+  G+++ FG  + G   +G + +  V  P+ ++ L     
Sbjct: 367 LEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRES--VAYPKELQLLSGHKA 424

Query: 104 VQAAIGNFFTAVL-------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           V+ A G + TA +             S   +++T+  G+  RLGH  +   ++P   +  
Sbjct: 425 VKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQP-TCVAA 483

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L +   +Q+A G+   +AL    SG  V+++G    G+LG+ + +D K P L+   +L  
Sbjct: 484 LADYNFLQVACGHSLTVALTA--SGH-VFTMGSKAYGQLGNPT-SDGKVPILVRD-KLQG 538

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                ++ G  H AV+     + TWG G  G LGHG+ E +  P +V+AL +    ++A 
Sbjct: 539 ETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIAC 598

Query: 271 G-DYTTFV 277
           G ++TT +
Sbjct: 599 GANFTTCI 606


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 26/334 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C       + + A G   T+ + + GQVY+ G +  G+  +  +GT     P  V +
Sbjct: 25  PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTH----PAPVAT 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L    +   A G   +  LS +G +Y++  GND +LGH T  +      ++  L    + 
Sbjct: 81  LAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ 140

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVV 216
           Q++ G  + LAL        +++ G    G+LG G+    +  P+ ++  + + L  V  
Sbjct: 141 QMSCGDDHCLALG---DDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQV-- 195

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            AG  H+  +   G V  WG    G LG  +E+ +  P  V+ L   K ++++ G+  T 
Sbjct: 196 TAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTA 255

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           ++++ G +++FG G S  LGH+++         N + P+ V  L  +   V QI+     
Sbjct: 256 ILTKAGGLFTFGAGGSGQLGHDSL--------HNEINPRRVLEL--MGSEVSQIACGRK- 304

Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNN 369
               HT A    SG LYAFG GD GQLG    NN
Sbjct: 305 ----HTLAFVPSSGTLYAFGCGDLGQLGTGHENN 334



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 146/314 (46%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  +FG+   G      V+ P          V + A G   T  L  +G+VY+  W
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
             + +LGH  E     P   + TL    +  IA G  + LAL+ Q +   +YS G G  G
Sbjct: 61  NGEGQLGHSHEGTHPAP---VATLAEEHIKHIACGQSHSLALSLQGN---LYSWGAGNDG 114

Query: 188 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LGH +     + PR+I++     +Q +  + G  H   +G DG++ TWG   +G LG G
Sbjct: 115 QLGHATVEHYSRIPRIIKKLSQQKIQQM--SCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172

Query: 247 NEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           N    +S P+ V++L  +    V  G   +F +S  G V+ +G   +  LG N   D Q 
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLN---DEQV 229

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                  TP  V  L+    +VV IS         HT  LT++G L+ FGAG  GQLG +
Sbjct: 230 KE-----TPCHVKPLR--THKVVYISCGEE-----HTAILTKAGGLFTFGAGGSGQLGHD 277

Query: 366 LVNNQTERGNPERV 379
            ++N+    NP RV
Sbjct: 278 SLHNEI---NPRRV 288



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL+GI + Q  AG   +  +S +G V+ +GK+S G  + G+   ++  +P  V+
Sbjct: 180 SPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAG--QLGLNDEQVKETPCHVK 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   VV  + G   TA+L++ G ++TF  G   +LGH +  N++ P  +L  L    V
Sbjct: 238 PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVL-ELMGSEV 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P +++
Sbjct: 297 SQIACGRKHTLAFV--PSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 41/341 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL  R +  + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 147 PLESRLV--LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 260

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 261 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVES--LSGLKT 315

Query: 214 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 316 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 375

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 376 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 425

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 426 AGEHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 461



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L G+ +   + G   T LI+  GQ++ FG  SFG   +G      ++ P+ VESL  + 
Sbjct: 257 ALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLK 314

Query: 103 VVQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  + + ++P   + +L
Sbjct: 315 TIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASL 373

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +   C  +   V S+G  + G+LG+ + +D + P L+E  ++   
Sbjct: 374 IDYDFYRVACGHSLTV---CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGE 428

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             + VA G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 429 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 488



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 117
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 112 GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 170

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R G V  F+WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 171 RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 224

Query: 176 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 225 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 283

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 282
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 284 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 343

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 344 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 388

Query: 343 FALTESGKLYAFGAGDKGQLG 363
             LT SGK+ + G    GQLG
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLG 409


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G    ++  P+LI+   L+ +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKS--LVGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++   L + + V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K  TSPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGLDCKK-QTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L +  +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+  ++++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 34/265 (12%)

Query: 125 FSWG--NDARLGHHTEPND--------VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           F WG  +D +LG  T P +        + P    G LE     +I A   Y +++  + +
Sbjct: 24  FVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKLE-----KIYAQSNYSMSIDTKGN 78

Query: 175 GMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
              V+S G G  G+LG+      +K+P++IE F + N+    +A G  H+A     G++ 
Sbjct: 79  ---VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLY 135

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           TWG G  G LGHG+ + E +PK V+   D++ + +A GD  T  +     VY +G  ++ 
Sbjct: 136 TWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAG 195

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG   +        + V  P+ +    Q  + VVQI          H+ ALT  G++Y+
Sbjct: 196 QLGFQDL--------SRVNLPKKIMFFNQ--KEVVQIQCGKK-----HSIALTVEGQVYS 240

Query: 354 FGAGDKGQLGIELVNNQTERGNPER 378
           +G+ + GQLGI+L     +   PE+
Sbjct: 241 WGSNEYGQLGIQLGKQSGKMTCPEQ 265



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 15/211 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP Y +     ++ +  A +  +M I   G V+++G   FG   Y  +  K    P+++E
Sbjct: 52  TPDYWQG----KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIE 106

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             S++NI V + A+G   +A  + +G++YT+  G + +LGH +  N+  P   +   ++I
Sbjct: 107 TFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKK-VKEFQDI 165

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V++IA G  + +A+    SG  VY  G    G+LG    +    P+ I      N + V
Sbjct: 166 RVLEIACGDSHTMAII---SGNLVYGWGFNQAGQLGFQDLSRVNLPKKI---MFFNQKEV 219

Query: 215 V-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           V +  G  H+  +  +G+V +WG   YG LG
Sbjct: 220 VQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 15/117 (12%)

Query: 25  GKRNLLGREVNGT-----------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 73
           GK    G+ VNG            P   +  Q IR+++ A G   TM I     VY +G 
Sbjct: 132 GKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGF 191

Query: 74  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +  G+   G Q    V  P+ +       VVQ   G   +  L+ EG+VY  SWG++
Sbjct: 192 NQAGQL--GFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVY--SWGSN 244


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 144/294 (48%), Gaps = 19/294 (6%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +I+ +    G +M I   GQ++ +G   +G+  +G   T+   SP+L+E+L +  +V A 
Sbjct: 215 KILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLGHGDSTTQ--KSPKLIEALASRVIVDAD 272

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G+  +A +   G +Y +  G+  RLG         P  +    E     Q+  G+ + +
Sbjct: 273 CGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTV 329

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            L+    G  V+S G    GKLGHG    +  P++I+  Q L +    +AAG   +A V 
Sbjct: 330 VLSTD--GRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTI--TQIAAGTQISAAVT 385

Query: 228 QDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           ++G +  WG+G   CLG+G+ +E   +PKVV+ L+    I +A G+     +++DG V++
Sbjct: 386 REGALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFT 443

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           +G  ++   G        G+  A   +PQ+V  L     + V    T++  W+A
Sbjct: 444 WGNNQNGQCG-------TGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWSA 490



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 33/330 (10%)

Query: 39  LYCRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 96
           LY R+L    +++   AG   T  +   G V A GK S+G    G   +   +SP L+E 
Sbjct: 152 LYPRNLSVYGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGA--SASSSSPILIEF 209

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
              ++ I   + + G+  +  + + G+++T+  G+  +LGH        P  L+  L + 
Sbjct: 210 PAPVRKILTSKGSDGH--SMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPK-LIEALASR 266

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            +V    G+ +  A+ C    +  Y  G G  G+LG G       P  +   +    +  
Sbjct: 267 VIVDADCGHRHSAAV-CDAGHL--YMWGEGDYGRLGLGDALQRSVPVQVPDIR----EAS 319

Query: 215 VVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V  G  H  V+  DGR V ++G    G LGHG+   +  PK++ AL  +    +A G  
Sbjct: 320 QVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQ 379

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  V+ +G +Y +G G            G G+     + P++V  L      V+ I++ 
Sbjct: 380 ISAAVTREGALYVWGFGPCL---------GNGSSDETFMLPKVVRGLS--GRVVIDIAIG 428

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +     H  ALT+ G ++ +G    GQ G
Sbjct: 429 EN-----HVVALTKDGLVFTWGNNQNGQCG 453



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 32/252 (12%)

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAG-YCYLLALACQPSGMAVY 179
           F WG+++      +  D  P   L    N+     V+ I AG YC    L    S   V 
Sbjct: 132 FCWGSNSS----QQLTDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVL----SNGTVM 183

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           + G G  G+LG+G+      P LIE F     + +       H+  +G++G++ TWG G 
Sbjct: 184 ANGKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGD 242

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           YG LGHG+   +  PK+++AL     +    G   +  V + G +Y +G G+   LG   
Sbjct: 243 YGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLG--- 299

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAGD 358
           + D           P  V  +++ ++ V   +         HT  L+  G+ +++FGA +
Sbjct: 300 LGDALQRS-----VPVQVPDIREASQVVCGFN---------HTVVLSTDGRTVWSFGAAE 345

Query: 359 KGQLGIELVNNQ 370
            G+LG    N Q
Sbjct: 346 NGKLGHGDTNRQ 357


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 151/344 (43%), Gaps = 43/344 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+L +      A G + 
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEALASSTTEVVACGEYH 372

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
              ++  G +YT  WG+       LGH  + +   P  + G LE + V  IA G  +   
Sbjct: 373 GCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAV 430

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    +   +++ G G  G LGH  R     PR +E   L  L+ V  A G WH A V +
Sbjct: 431 VT---TAGQLFTFGDGTFGVLGHNDRQSAYSPREVE--SLKGLRTVRAACGVWHTAAVVE 485

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E   VP  V AL D     VA G   T 
Sbjct: 486 VMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTV 545

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G+V++ G      LG +  ADG+         P +V        R+V   + +  
Sbjct: 546 ALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG------RLVDAYVEDIA 590

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
               H   +T   ++Y +G G  G+LG     +Q +R  P  V+
Sbjct: 591 CGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLVE 631



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+ +R+   A G   T +++ AGQ++ FG  +FG    G    +   SP+ VESLK +  
Sbjct: 413 LEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRT 470

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 471 VRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAAL 529

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +AL  +     V+++G  + G+LG   + D K P ++E  +L++ 
Sbjct: 530 VDHNFRKVACGHSLTVALTTKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDA 584

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA H A V     V TWG G  G LGHG++E  + P +V+AL + +   +A G
Sbjct: 585 YVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACG 644

Query: 272 DYTTFVV 278
              T  V
Sbjct: 645 ATFTAAV 651



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 30/284 (10%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++++G V+T+   +  RLGH  + +   P  L+  L
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQ-LVEAL 358

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +     +A G  +  A+      +  +  G    G LGHG+      P+ +    L  +
Sbjct: 359 ASSTTEVVACGEYHGCAVTLS-GDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEV 416

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           +   +A G WH AVV   G++ T+G G +G LGH + +    P+ V++L  ++ +  A G
Sbjct: 417 RVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACG 476

Query: 272 DYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
            + T  V E             G ++++G G+   LGH       G++    L P  V +
Sbjct: 477 VWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGH-------GDKEQR-LVPTCVAA 528

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           L   N R V          ++ T ALT  G+++  G+   GQLG
Sbjct: 529 LVDHNFRKVACG-------HSLTVALTTKGEVFTMGSSMFGQLG 565



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  Y+         +   SV  G GG +      D   P+ +E   +L++Q   VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAMN----LDAPLPKALESAIVLDVQ--YVACG 317

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             HAA+V + G V TWG    G LGHG +   S P++V+AL       VA G+Y    V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             GD+Y++G G      H+    G GN  ++ +  ++   L++V  RV  I+      W 
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            HT  +T +G+L+ FG G  G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 153/339 (45%), Gaps = 40/339 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++ +G+V+ +G+DS G   +G +   +   P+LVESL    +   
Sbjct: 77  LDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVESLAACNIDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH T+     P  + G LE + V  ++ G
Sbjct: 135 ACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCG 192

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   +    S   +++ G G  G LGHG+      PR +E   L  L+ + VA G WH
Sbjct: 193 TWHTALIT---SMGQLFTFGDGSFGVLGHGNVKSISCPREVES--LSGLKTIAVACGVWH 247

Query: 223 AA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A     +V Q       G++ TWG G    LGHG++E    P  V +L D     VA G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACG 307

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V++ G      LG N  +DG+         P LV   K  NE V+Q++
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVGD-KITNEHVLQVA 356

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                  + H   LT   +++ +G G  G+LG   + +Q
Sbjct: 357 CG-----SYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQ 390



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 20/240 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G+++   + G   T LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  + 
Sbjct: 180 ALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLK 237

Query: 103 VVQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  +   + P   + +L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   + L    +   V+++G  + G+LG+ +   +  P L+   ++ N 
Sbjct: 297 IDYDFYRVACGHSLTVGLT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVGD-KITNE 350

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             + VA G++H +V+     V TWG G  G LGHG+ E + VP +V+AL D    H+A G
Sbjct: 351 HVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACG 410



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    ++++R G V+T  WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFT--WGEDSGGRLGHGTREDSVHPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    +  +A G  +  A+    +   +Y+ G G    G LGHG+      PR I    
Sbjct: 125 SLAACNIDFVACGEFHTCAVT---TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISG-A 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHGN +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-------GDKEAR-LNPTC 292

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  ++    +++  +S+     T  LT SGK++  G    GQLG
Sbjct: 293 VASL--IDYDFYRVACGHSL-----TVGLTTSGKVWTMGNSVYGQLG 332


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 76  FGEAEYGVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +G   +G  GT     P ++E   + F     V + A G   +  L  +G VYT      
Sbjct: 63  WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LGH  E +  E    +G L +  ++ +A G  + LAL+ Q     ++S G G  G+LG
Sbjct: 123 GQLGHEKEGSKPEQ---IGALADQHIIHVACGESHSLALSDQGR---LFSWGAGSDGQLG 176

Query: 191 HGSRTDE-KHPRLIEQF-QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
             +  D    PRLI++  Q + LQ   V+ G WH   +  DG+   WG   +G LG G E
Sbjct: 177 LTTTEDSVAVPRLIKKLNQEMILQ---VSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233

Query: 249 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
              ++ P+ V++L+ +    VA G   +F +S  G V+ +G   S  LG +   D +   
Sbjct: 234 FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPC 293

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
           H  +L  Q          +VV IS  +      HT  LT++G ++ FGAG  GQLG +  
Sbjct: 294 HVKLLRTQ----------KVVYISCGSD-----HTAVLTKTGGVFTFGAGSCGQLGHDSF 338

Query: 368 NNQTERGNPERV 379
           N++    NP RV
Sbjct: 339 NDEV---NPRRV 347



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 26/317 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + A G   ++ + + G+VY  G ++ G+  +  +G+K    P+ + +L +  ++  A 
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK----PEQIGALADQHIIHVAC 150

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  LS +GR++++  G+D +LG  T  + V    L+  L    ++Q++ G  + LA
Sbjct: 151 GESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLA 210

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           LA   +    ++ G    G+LG G     +  P+ ++    + L    VAAG  H+  + 
Sbjct: 211 LA---ADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPL--AQVAAGGAHSFALS 265

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G V  WG    G LG  +E+    P  V+ L   K ++++ G   T V+++ G V++F
Sbjct: 266 LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTF 325

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT- 346
           G G    LGH++  D    R            L+ +   V QI+         HT A   
Sbjct: 326 GAGSCGQLGHDSFNDEVNPRRV----------LELMGSEVSQIACGRQ-----HTLAFVP 370

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG +YAFG G KGQLG
Sbjct: 371 SSGLIYAFGCGIKGQLG 387



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 7/199 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   +SL GI + Q AAG   +  +S +G V+ +GK++ G  + G+   +
Sbjct: 230 LGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSG--QLGLSDEQ 287

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G+  TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 288 DRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRV 347

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           L  L    V QIA G  + LA    PS   +Y+ GCG+ G+LG G   + K P  ++   
Sbjct: 348 L-ELMGSEVSQIACGRQHTLAFV--PSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHW 404

Query: 208 LLNLQPVVVAAGAWHAAVV 226
             + +PV   A A    VV
Sbjct: 405 AAHNEPVSRRADACKHYVV 423



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 27/264 (10%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
             P   + L    I+Q + G    + ++  GQ +A+G++S G+   G +      SPQ V
Sbjct: 185 AVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPS-QASPQRV 243

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 153
           +SL  I + Q A G   +  LS  G V  F WG +   +LG   E  D E    +  L  
Sbjct: 244 KSLDGIPLAQVAAGGAHSFALSLSGAV--FGWGKNTSGQLGLSDE-QDRESPCHVKLLRT 300

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             VV I+ G  +   L        V++ G G  G+LGH S  DE +PR +   +L+  + 
Sbjct: 301 QKVVYISCGSDHTAVLT---KTGGVFTFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEV 355

Query: 214 VVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEEC------------ESVPKVV 257
             +A G  H  A V   G +  +G G  G LG G   N +C            E V +  
Sbjct: 356 SQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRA 415

Query: 258 QALNDVKAIHVATGDYTTFVVSED 281
            A       H+ +G   TFV+  +
Sbjct: 416 DACKHYVVKHIFSGGDQTFVLCSE 439



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 19/136 (13%)

Query: 231 RVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           ++  WG+  +G  G  +     +  P+    +++     VA G   +  + EDG+VY+ G
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LGH    + +G++      P+ + +L   ++ ++ ++   S     H+ AL++ 
Sbjct: 119 VNTKGQLGH----EKEGSK------PEQIGAL--ADQHIIHVACGES-----HSLALSDQ 161

Query: 349 GKLYAFGAGDKGQLGI 364
           G+L+++GAG  GQLG+
Sbjct: 162 GRLFSWGAGSDGQLGL 177


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 151/344 (43%), Gaps = 43/344 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+L +      A G + 
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEALASSTTEVVACGEYH 372

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
              ++  G +YT  WG+       LGH  + +   P  + G LE + V  IA G  +   
Sbjct: 373 GCAVTLSGDLYT--WGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAV 430

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    +   +++ G G  G LGH  R     PR +E   L  L+ V  A G WH A V +
Sbjct: 431 VT---TAGQLFTFGDGTFGVLGHNDRQSAYSPREVE--SLKGLRTVRAACGVWHTAAVVE 485

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G  G LGHG++E   VP  V AL D     VA G   T 
Sbjct: 486 VMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTV 545

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G+V++ G      LG +  ADG+         P +V        R+V   + +  
Sbjct: 546 ALTTKGEVFTMGSSMFGQLG-DPQADGK--------LPGMVEG------RLVDAYVEDIA 590

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
               H   +T   ++Y +G G  G+LG     +Q +R  P  V+
Sbjct: 591 CGAHHVACVTLKSEVYTWGKGANGRLGH---GDQEDRNTPTLVE 631



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+ +R+   A G   T +++ AGQ++ FG  +FG    G    +   SP+ VESLK +  
Sbjct: 413 LEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGV--LGHNDRQSAYSPREVESLKGLRT 470

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 471 VRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP-TCVAAL 529

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +AL  +     V+++G  + G+LG   + D K P ++E  +L++ 
Sbjct: 530 VDHNFRKVACGHSLTVALTTKGE---VFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDA 584

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA H A V     V TWG G  G LGHG++E  + P +V+AL + +   +A G
Sbjct: 585 YVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACG 644

Query: 272 DYTTFVV 278
              T  V
Sbjct: 645 ATFTAAV 651



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 30/284 (10%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++++G V+T+   +  RLGH  + +   P  L+  L
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQ-LVEAL 358

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +     +A G  +  A+      +  +  G    G LGHG+      P+ +    L  +
Sbjct: 359 ASSTTEVVACGEYHGCAVTLS-GDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEV 416

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           +   +A G WH AVV   G++ T+G G +G LGH + +    P+ V++L  ++ +  A G
Sbjct: 417 RVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACG 476

Query: 272 DYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
            + T  V E             G ++++G G+   LGH       G++    L P  V +
Sbjct: 477 VWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGH-------GDKEQR-LVPTCVAA 528

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           L   N R V          ++ T ALT  G+++  G+   GQLG
Sbjct: 529 LVDHNFRKVACG-------HSLTVALTTKGEVFTMGSSMFGQLG 565



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  Y+         +   SV  G GG +      D   P+ +E   +L++Q   VA G
Sbjct: 264 ALGDVYMWGEGVGDGILGGGSVRIGAGGAM----NLDAPLPKALESAIVLDVQ--YVACG 317

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             HAA+V + G V TWG    G LGHG +   S P++V+AL       VA G+Y    V+
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             GD+Y++G G      H+    G GN  ++ +  ++   L++V  RV  I+      W 
Sbjct: 378 LSGDLYTWGDGT-----HSLGLLGHGNDISHWIPKRVNGPLEEV--RVASIACGP---W- 426

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            HT  +T +G+L+ FG G  G LG
Sbjct: 427 -HTAVVTTAGQLFTFGDGTFGVLG 449


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 160/364 (43%), Gaps = 51/364 (14%)

Query: 30  LGREVNGTPLYCR----SLQGIRI---------IQAAAGAGRTMLISDAGQVYAFGKDSF 76
           LG     T  YCR    ++ GI            Q +AGA  T+ +   G V+A+G +  
Sbjct: 561 LGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANW- 619

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
             ++ G   T   ++P  V  L +   +   +  + T  L  +G V+T+ W N  +LG  
Sbjct: 620 -NSQLGDGSTTDSSTPVQVSGLTDAIAIAGGV--YHTIALKSDGTVWTWGWNNSGQLGDG 676

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
           T  N   P  ++G  +   V+ IA G  + +AL    +   V++ G    G+LG G+ T+
Sbjct: 677 TTINRSTPVQVIGLTD---VIAIAGGDYHTIALKSDGT---VWTWGFNYYGQLGGGATTN 730

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
              P      Q+  L  ++  AG + H+  +  DG V  WG+  YG LG G+      P 
Sbjct: 731 RSTP-----VQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPV 785

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            V  L D+ AI  A G   T  +  DG V+++G  E   LG     DG      N  TP 
Sbjct: 786 QVSGLTDIIAI--AGGYIHTIALKSDGTVWAWGHNEGGQLG-----DGT---TTNSSTPV 835

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V+ L  V      I++T  +Y   HT AL   G ++ +G    GQLG     + TER  
Sbjct: 836 QVSGLTDV------IAVTARLY---HTIALKSDGTVWTWGRNIYGQLGD---GSTTERSL 883

Query: 376 PERV 379
           P +V
Sbjct: 884 PVQV 887



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 142/328 (43%), Gaps = 37/328 (11%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+    L    +I  A G   T+ +     V+A+G +S+G+   G    + + +P  V 
Sbjct: 1081 TPVQVSGLT--DVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VT 1136

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L NI  +  A G   T  L  +G V+ + +    +LG  +  N   P  + G  +   V
Sbjct: 1137 YLTNIIAI--AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---V 1191

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            + IA  Y + +AL    +   V++ G    G+LG GS T+   P      Q+  L  V+ 
Sbjct: 1192 IAIAGEYVHTVALKSDGT---VWAWGYNGYGQLGDGSTTNRSTP-----VQVSGLTDVIA 1243

Query: 217  AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
             AG + H   +  DG V TWGW   G LG G       P  V  L D  AI +A GDY T
Sbjct: 1244 IAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHT 1301

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +  D  V+++G      LG     DG      N LTP  V+ L         I++   
Sbjct: 1302 IALKSDNTVWAWGSNSYGQLG-----DGT---TINRLTPVQVSGLTDA------IAIAGG 1347

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
             Y   HT AL     ++A+G+   GQLG
Sbjct: 1348 DY---HTIALKSDNTVWAWGSNSYGQLG 1372



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 150/339 (44%), Gaps = 41/339 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L    +I  A GA  T+ +   G V+A+G +  G+   G   T   ++P  V 
Sbjct: 185 TPVQVSGLT--DVIAIAGGAYHTIALKSDGTVWAWGNNEGGQ--LGDGSTTDRSTPVQVS 240

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            L ++  +  A G   T  L  +G V+  +WG++   RLG  +  N   P  + G  +  
Sbjct: 241 GLTDVIAI--AGGYAHTIALKSDGTVW--AWGDNEGGRLGDGSTTNRSIPVKVGGLSD-- 294

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V+ IA G  + +AL    +   V++ G   GG+LG GS T+   P      ++  L  V
Sbjct: 295 -VIAIAGGNAHTIALKSDGT---VWAWGDNEGGQLGDGSTTNRSTP-----VKVSGLADV 345

Query: 215 VVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           +  AG + H  V+  DG V TWG    G LG G+    S P  V  L DV AI  A G Y
Sbjct: 346 IAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVY 403

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  V  DG ++++G      LG     DG      N  TP  V  L  V      I++ 
Sbjct: 404 HTIAVKSDGTMWAWGYNWYGQLG-----DGT---TINSSTPVQVNGLTDV------IAIA 449

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
              Y   HT A+   G ++ +G    GQLG   + N++ 
Sbjct: 450 GGYY---HTIAMKSDGAVWTWGFNYYGQLGDGSITNRST 485



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           Q + G + T  L  +G V+T+    + +LG  +  N   P  + G  +   V+ IA G  
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIAGGAY 203

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HA 223
           + +AL    +   V++ G   GG+LG GS TD   P      Q+  L  V+  AG + H 
Sbjct: 204 HTIALKSDGT---VWAWGNNEGGQLGDGSTTDRSTP-----VQVSGLTDVIAIAGGYAHT 255

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +  DG V  WG    G LG G+    S+P  V  L+DV AI  A G+  T  +  DG 
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAI--AGGNAHTIALKSDGT 313

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V+++G  E   LG  +      NR     TP  V+ L  V      I++       +HT 
Sbjct: 314 VWAWGDNEGGQLGDGSTT----NRS----TPVKVSGLADV------IAIAGGY---SHTI 356

Query: 344 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            L   G ++ +G  + GQLG     + T R  P +V
Sbjct: 357 VLRSDGTVWTWGHNEGGQLGD---GSTTNRSTPVQV 389



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 18/250 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  A G   T+ +   G V+ +G + +G+   G    +  ++P  V+ L +I  +  A 
Sbjct: 693 VIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNR--STPVQVKGLADIIAI--AG 748

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  L  +G V+ + +    +LG  +  + + P  + G  +   ++ IA GY + +A
Sbjct: 749 GYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTD---IIAIAGGYIHTIA 805

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 227
           L    +   V++ G   GG+LG G+ T+   P      Q+  L  V+ V A  +H   + 
Sbjct: 806 LKSDGT---VWAWGHNEGGQLGDGTTTNSSTP-----VQVSGLTDVIAVTARLYHTIALK 857

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            DG V TWG   YG LG G+    S+P  V  L DV AI  A G Y T  +  DG V+++
Sbjct: 858 SDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIAI--AGGYYHTIALKSDGAVWAW 915

Query: 288 GCGESASLGH 297
           G   +  LG+
Sbjct: 916 GYNGNNQLGN 925



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 103/227 (45%), Gaps = 31/227 (13%)

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           IP  QI+AG  + L L  +P G AV++ G    G+LG  S T+   P      Q+  L  
Sbjct: 143 IPRSQISAGAYHTLTL--KPDG-AVWTWGANWNGQLGDESTTNRSTP-----VQVSGLTD 194

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           V+ +A GA+H   +  DG V  WG    G LG G+    S P  V  L DV AI  A G 
Sbjct: 195 VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIAI--AGGY 252

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  +  DG V+++G  E   LG  +      NR      P  V  L  V      I++
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTT----NRSI----PVKVGGLSDV------IAI 298

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 NAHT AL   G ++A+G  + GQLG     + T R  P +V
Sbjct: 299 AGG---NAHTIALKSDGTVWAWGDNEGGQLGD---GSTTNRSTPVKV 339



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 119/268 (44%), Gaps = 33/268 (12%)

Query: 99   KNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            + IF+ ++ I  G + T  L  +G V+      + +LG  T  N   P  + G  +   V
Sbjct: 1035 ETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---V 1091

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            + IA G  + +AL    +   V++ G    G+LG G+ T+   P  +    L N+  + +
Sbjct: 1092 IAIAGGDYHTIALKSDNT---VWAWGSNSYGQLGDGTITNRSIPTPVTY--LTNI--IAI 1144

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-T 275
            A G  H   +  DG V  WG+  YG LG G+    S P  V  L DV AI    G+Y  T
Sbjct: 1145 AGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAI---AGEYVHT 1201

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              +  DG V+++G       G+  + DG      N  TP  V+ L  V      I++   
Sbjct: 1202 VALKSDGTVWAWGYN-----GYGQLGDGS---TTNRSTPVQVSGLTDV------IAIAGG 1247

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 HT AL   G ++ +G  + GQLG
Sbjct: 1248 Y---VHTIALKSDGTVWTWGWNNSGQLG 1272



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 95/227 (41%), Gaps = 31/227 (13%)

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
            +P  QI+AG  + L L  +P G  V++ G    G+LG G+  +   P      Q+  L  
Sbjct: 1039 LPRSQISAGAYHTLTL--KPDGT-VWACGANWNGQLGDGTTINRSTP-----VQVSGLTD 1090

Query: 214  VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V+ +A G +H   +  D  V  WG   YG LG G     S+P  V  L ++ AI  A G 
Sbjct: 1091 VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTNIIAI--AGGY 1148

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
              T  +  DG V+++G      LG  +      NR   V    L   +    E V     
Sbjct: 1149 VHTIALKSDGTVWAWGYNGYGQLGDGSTT----NRSTPVQVSGLTDVIAIAGEYV----- 1199

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                    HT AL   G ++A+G    GQLG     + T R  P +V
Sbjct: 1200 --------HTVALKSDGTVWAWGYNGYGQLGD---GSTTNRSTPVQV 1235



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 51/348 (14%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  A G   T+ +   G V+A+G +  G+   G   T   ++P  V  L ++  +  A 
Sbjct: 295 VIAIAGGNAHTIALKSDGTVWAWGDNEGGQ--LGDGSTTNRSTPVKVSGLADVIAI--AG 350

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   T VL  +G V+T+      +LG  +  N   P  + G  +   V+ IA G  + +A
Sbjct: 351 GYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIA 407

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 227
           +    +   +++ G    G+LG G+  +   P      Q+  L  V+ +A G +H   + 
Sbjct: 408 VKSDGT---MWAWGYNWYGQLGDGTTINSSTP-----VQVNGLTDVIAIAGGYYHTIAMK 459

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDYTTFVVSE---DG 282
            DG V TWG+  YG LG G+    S P  + +  +  V    V TG  T   +S    +G
Sbjct: 460 SDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNG 519

Query: 283 DVYSFGCGESASLGH-----------NAIADGQGNRHANV----LTPQLVTSLKQVNERV 327
            V   G   +A   +             I+ G G+ +       LTP      +  ++ +
Sbjct: 520 WVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNI 579

Query: 328 VQI------------SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             I             ++   Y   HT  L   G ++A+GA    QLG
Sbjct: 580 GGIYYGSETTFMPRTQISAGAY---HTLTLKPDGTVWAYGANWNSQLG 624



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 20/247 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  + L    II  A G   ++ +   G V+A+G + +G+   G     L  +P  V 
Sbjct: 733 TPVQVKGLA--DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHL--TPVQVS 788

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L +I  +  A G   T  L  +G V+ +      +LG  T  N   P  + G  +   V
Sbjct: 789 GLTDIIAI--AGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD---V 843

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           + + A   + +AL    +   V++ G  + G+LG GS T+   P      Q++ L  V+ 
Sbjct: 844 IAVTARLYHTIALKSDGT---VWTWGRNIYGQLGDGSTTERSLP-----VQVIGLTDVIA 895

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP--KVVQALNDVKAIHVATGDY 273
           +A G +H   +  DG V  WG+     LG+ + +  S P   +   +N V    V TG  
Sbjct: 896 IAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGST 955

Query: 274 TTFVVSE 280
           T   +S 
Sbjct: 956 TCVSLSS 962


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 41/341 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL  R +  + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 70  PLESRLV--LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 184 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVES--LSGLKT 238

Query: 214 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 298

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 299 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 348

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 349 AGEHVLQVAC-----GSYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L G+ +   + G   T LI+  GQ++ FG  SFG   +G      ++ P+ VESL  + 
Sbjct: 180 ALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLK 237

Query: 103 VVQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  + + ++P   + +L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +   C  +   V S+G  + G+LG+ + +D + P L+E  ++   
Sbjct: 297 IDYDFYRVACGHSLTV---CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGE 351

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             + VA G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 50/323 (15%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 117
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R G V+T  WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDVFT--WGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 176 MAVYSVGCGLG--GKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
             +Y+ G G    G LGHG  TD  H  P+ I    L  L    V+ G WH A++   G+
Sbjct: 148 GELYTWGDGTHNVGLLGHG--TDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQ 204

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------- 280
           + T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E           
Sbjct: 205 LFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+    
Sbjct: 265 AGKLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL---- 310

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
            T  LT SGK+ + G    GQLG
Sbjct: 311 -TVCLTTSGKVLSMGNSVYGQLG 332


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 155/342 (45%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q   G     L++  G+V+ +G+DS G   +G +  K    P LVE
Sbjct: 251 TPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVE 308

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           SL    V   A G + +  +S  G ++T  WG+       LGH T+ +   P  + G LE
Sbjct: 309 SLAITNVTFVACGEYHSCAVSTSGDLFT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLE 366

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + VV +A G  +  ALA   S   +++ G G  G LGHG+R    +P+   + QLL+  
Sbjct: 367 GLQVVAVACG-TWHSALAT--SNGKLFTFGDGRFGVLGHGNRASVAYPK---EVQLLSGY 420

Query: 212 QPVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + + VA G WH+A +              R+ TWG G    LGH N+E    P  V A+ 
Sbjct: 421 KAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVA 480

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +     VA G   T  ++  G V+S G      LG N  +DG+         P LV   K
Sbjct: 481 EYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLG-NPNSDGK--------VPILVRD-K 530

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V E V +IS   +     H   LT   +LY +G G  G+LG
Sbjct: 531 LVGEFVEEISCGAN-----HVAVLTSRSELYTWGRGANGRLG 567



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 149/312 (47%), Gaps = 35/312 (11%)

Query: 66  GQVYAFGK--DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           G+V+A G   D  G        T ++T P+ +ES   + V Q   G+   A+++R+G V+
Sbjct: 225 GEVWADGNSFDGLGSQLQAFCKTDVLT-PKPLESDVVLDVHQIGPGDRHIALVTRQGEVF 283

Query: 124 TFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           T  WG D+  RLGH  E +   PH L+ +L    V  +A G  +  A++     +  +  
Sbjct: 284 T--WGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCAVSTS-GDLFTWGD 339

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G    G LGHG+      P+ +    L  LQ V VA G WH+A+   +G++ T+G GR+G
Sbjct: 340 GTHGAGLLGHGTDVSYWIPKRVSG-PLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFG 398

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD----------VYSFGCGE 291
            LGHGN    + PK VQ L+  KAI VA G + +  + +  D          ++++G G+
Sbjct: 399 VLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGD 458

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH        N+    L P  V ++ + N   V    T        T ALT SG +
Sbjct: 459 QYRLGH-------ANKET-YLEPTCVAAVAEYNFHQVACGYT-------MTVALTASGHV 503

Query: 352 YAFGAGDKGQLG 363
           ++ G    GQLG
Sbjct: 504 FSMGGTTYGQLG 515



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 18/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG   FG   +G + +  V  P+ V+ L     
Sbjct: 365 LEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKA 422

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +          +   R++T+  G+  RLGH  +   +EP  +    E 
Sbjct: 423 IKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAE- 481

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A GY   +AL    SG  V+S+G    G+LG+ + +D K P L+   +L+    
Sbjct: 482 YNFHQVACGYTMTVALTA--SGH-VFSMGGTTYGQLGNPN-SDGKVPILVRD-KLVGEFV 536

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ GA H AV+     + TWG G  G LGHG+ + +  P +V+AL D    +++ G  
Sbjct: 537 EEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGST 596

Query: 274 TTFVV 278
            T  +
Sbjct: 597 FTSCI 601


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 180/391 (46%), Gaps = 44/391 (11%)

Query: 1   MATPAYQVAHLSPILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTM 60
           MATP    A L+        +  +G+  + G E    P +  +L    +    AG+  ++
Sbjct: 1   MATPLRATAVLA------WGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSL 54

Query: 61  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
            I D G+++ +G +  G   +  + TK  +SP  V++L    +VQAAIG +    +  +G
Sbjct: 55  AICDDGRLFTWGWNQRGTLGHPPE-TKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKG 113

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           R Y  +WG +   G   E  + +         +IP+ Q     C L     Q +    +S
Sbjct: 114 RAY--AWGGN-EYGQCGEEPERKEDGTRALRRDIPIPQ----RCALKLKVRQVAAGGTHS 166

Query: 181 VGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCT 234
           V   +  + GH     +  P     ++    ++  L+ V V+A GA+H   + +D  V  
Sbjct: 167 V---VLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTED--VIL 221

Query: 235 WGWG--RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           W WG   YG LG G+ +  S P  V+ L+D+  + +A G + +  ++ DG+VY++G GE 
Sbjct: 222 WAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEH 281

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG        G+  ++ + P  V  L    E +VQ+S   +     H+ AL   G+++
Sbjct: 282 GRLGF-------GDDKSSHMVPLKVELL--AGEDIVQVSCGGT-----HSVALARDGRMF 327

Query: 353 AFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           ++G GD G+LG      +   G+P  + I+L
Sbjct: 328 SYGRGDHGRLGY---GRKVTTGHPMELPINL 355


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 162/342 (47%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q   G     L++  G+V+ +G++  G   +G+Q    ++ P+LVE
Sbjct: 250 TPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVE 307

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
            L    +   A G + T V+S  G +  FSWG    N   LGH ++ +   P  + G LE
Sbjct: 308 FLALTNIDFVACGEYHTCVVSTSGDL--FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLE 365

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V+ +A G  +  ALA   +   +++ G G  G LGHG+R    +P+ ++   L  L+
Sbjct: 366 GLQVLSVACG-TWHSALAT--ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQS--LNGLK 420

Query: 213 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            V VA   WH A    V+GQ        ++ TWG G    LGHGN+E   +P  V +L D
Sbjct: 421 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 480

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                +A G   T  ++  G V++ G      LG N+I+DG+         P LV   + 
Sbjct: 481 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGK--------LPCLVQD-RL 530

Query: 323 VNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           V E V +I+        AH  A LT   +++ +G G  G+LG
Sbjct: 531 VGEFVEEIAC------GAHHVAVLTSRSEVFTWGKGANGRLG 566



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 43/315 (13%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G+V+  G    G A      T ++T P+ +ES   + V Q   G    A+++R+G V+T 
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLT-PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFT- 283

Query: 126 SWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            WG +   RLGH  + +   P  +    L NI  V     +  +++ +       ++S G
Sbjct: 284 -WGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGD-----LFSWG 337

Query: 183 CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G+   G LGHGS      P+ +    L  LQ + VA G WH+A+   +G++ T+G G +
Sbjct: 338 DGIHNVGLLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSALATANGKLFTFGDGAF 396

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCG 290
           G LGHGN E  S PK VQ+LN +K + VA   + T  + E             ++++G G
Sbjct: 397 GVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDG 456

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTES 348
           +   LGH       GN+   +L P  V+SL   N   +            HTF  ALT S
Sbjct: 457 DKNRLGH-------GNKETYLL-PTCVSSLIDYNFHKIAC---------GHTFTVALTTS 499

Query: 349 GKLYAFGAGDKGQLG 363
           G ++  G    GQLG
Sbjct: 500 GHVFTMGGTAHGQLG 514



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 22/244 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+SL  +  
Sbjct: 364 LEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKT 421

Query: 104 VQAA------------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+ A            +G   T++ SR  +++T+  G+  RLGH  +   + P   + +L
Sbjct: 422 VKVACSIWHTAAIVEVMGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSL 478

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+ + +AL    SG  V+++G    G+LG+ S +D K P L+ Q +L+  
Sbjct: 479 IDYNFHKIACGHTFTVALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGE 533

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA H AV+     V TWG G  G LGHG+ E +  P +V+AL D     ++ G
Sbjct: 534 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 593

Query: 272 DYTT 275
              T
Sbjct: 594 SNFT 597


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN---IFVV 104
            + I+ + G     +I+D G++Y +G +  G+  +G++  K ++ P+ V+  +    IF+V
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182

Query: 105  QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            +   G    AV   +   + +SWG+D   +LGH T+  +     ++  L    +  IAAG
Sbjct: 1183 ECG-GEHTIAV---DSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAG 1238

Query: 163  YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQP------VV 215
            + + + L  + SG  ++S G G  G+LG GS   +  P  IE   ++  LQ         
Sbjct: 1239 FAHNIVL--KKSG-ELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQ 1295

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
            +A G  H+ +  ++G V +WG G+ G LGH   E  S P++++ L  V  I  + G + T
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKI--SCGHFHT 1353

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
               ++  +VYS+G GE   LGH++  D                S+ +V +  +Q +++  
Sbjct: 1354 VATTDLKNVYSWGSGEHMKLGHSSDKD---------------ESVPKVVDFFIQKNVSKV 1398

Query: 336  IYWNAHTFALT---------------------ESGKLYAFGAGDKGQLGI 364
            +    HT  +T                      S  +YA+G+ + G+LG+
Sbjct: 1399 VCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGL 1448



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 53/367 (14%)

Query: 31   GREVNGTPLYCRSLQGIR----IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
            G EVN T    + +   R    I     G   T+ +     VY++G D FG+  +G +  
Sbjct: 1157 GLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAV 1216

Query: 87   KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTE--PND 141
               + P+++E L    +   A G     VL + G +++F +G+  +LG    H++  P  
Sbjct: 1217 NQ-SRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTR 1275

Query: 142  VEPHPLLGTLENI---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +E + ++G L++     + QIA G+ +  ++ C  +G  VYS G G  G+LGH    +  
Sbjct: 1276 IEINAIMGGLQHHDGGKITQIACGFGH--SVICSENG-EVYSWGLGKQGQLGHKVFENIS 1332

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             PRLIE  + +      ++ G +H         V +WG G +  LGH +++ ESVPKVV 
Sbjct: 1333 KPRLIETLRGVT----KISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVD 1388

Query: 259  ALNDVKAIHVATGDYTTFVVS----------EDGD-----------VYSFGCGESASLGH 297
                     V  G   T  ++          +D D           +Y++G  E   LG 
Sbjct: 1389 FFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGL 1448

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                   G+  +      + T++K VN   ++ IS  +       +  +T +  +Y +G 
Sbjct: 1449 G------GDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDF-----SAMITSNNAIYVWGC 1497

Query: 357  GDKGQLG 363
            G  GQ+G
Sbjct: 1498 GRFGQIG 1504



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 41/293 (13%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P     L G +I   AAG    +++  +G++++FG   FG+   G   +K + +   + +
Sbjct: 1221 PKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINA 1280

Query: 98   LKNIF-------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            +           + Q A G   + + S  G VY++  G   +LGH    N  +P  L+ T
Sbjct: 1281 IMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPR-LIET 1339

Query: 151  LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            L    V +I+ G+ + +A     +   VYS G G   KLGH S  DE  P++++ F   N
Sbjct: 1340 LRG--VTKISCGHFHTVATTDLKN---VYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKN 1394

Query: 211  LQPVVVAAGAWHAAVV---------GQDGR------------VCTWGWGRYGCLGHGNEE 249
            +  VV   G  H   +          QD              +  WG   +G LG G + 
Sbjct: 1395 VSKVV--CGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDL 1452

Query: 250  C-----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
                  + +P  ++ +N +  I ++ G   + +++ +  +Y +GCG    +G+
Sbjct: 1453 KSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGN 1505



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)

Query: 178  VYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCT 234
            +Y+ G    G+LGHG   ++    P+ ++ F+     P+ +V  G  H   V  +  V +
Sbjct: 1143 LYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR--GKSPIFMVECGGEHTIAVDSNYFVYS 1200

Query: 235  WGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
            WG  ++G LGHG +   +S PKV++ L   K   +A G     V+ + G+++SFG G+  
Sbjct: 1201 WGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFG 1260

Query: 294  SLGHNAIADGQGNRHA-NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG        G+ H+ N+ T   + ++    +      +T       H+   +E+G++Y
Sbjct: 1261 QLG-------TGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVY 1313

Query: 353  AFGAGDKGQLGIELVNN 369
            ++G G +GQLG ++  N
Sbjct: 1314 SWGLGKQGQLGHKVFEN 1330



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 31/240 (12%)

Query: 46   GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
            G +I Q A G G +++ S+ G+VY++G    G+  + V   + ++ P+L+E+L+   V +
Sbjct: 1290 GGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKV--FENISKPRLIETLRG--VTK 1345

Query: 106  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
             + G+F T   +    VY++  G   +LGH ++ ++  P  +   ++   V ++  G  +
Sbjct: 1346 ISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNH 1404

Query: 166  LLALACQ------------------PSGMAVYSVGCGLGGKLGHGSRT-----DEKHPRL 202
             + +                      S   +Y+ G    GKLG G        D+  P  
Sbjct: 1405 TMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTA 1464

Query: 203  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            I+    LNL  + ++ G+  +A++  +  +  WG GR+G +G+G  +   VP  + +LND
Sbjct: 1465 IKGVNSLNL--IDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI-SLND 1521


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 34/325 (10%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           +   I Q A G   T+LI+  GQVY+ G + +G+  +     +L    QL+  L      
Sbjct: 109 KATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRL----QLIPGLDAFVFK 164

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE--PHPLLGTLENIPVVQIA 160
           + A G   T  ++  G++  FSWG++A  +LG +++ N +E  PH ++  L    VVQ+A
Sbjct: 165 KVACGAHHTLAVNEWGQL--FSWGSNAEGQLGLNSK-NLIECVPH-MVRALGTSVVVQVA 220

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAG 219
            G  ++LAL    +   +YS G    G+LG G+   +E  P+LI    L  +    +  G
Sbjct: 221 CGINHVLALT---NNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISS--LAGVPIAFITCG 275

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            +H+  + + G V  WG   +G LG  +    ++P+ +Q L + K  + A G+  +  ++
Sbjct: 276 GYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLT 335

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            DG V++ G G    LGH       GN  +N + P+ V  L  +   V QIS        
Sbjct: 336 VDGGVFTCGAGMYGQLGH-------GNT-SNEILPRQVMEL--MGSTVTQISCGKR---- 381

Query: 340 AHTFALTES-GKLYAFGAGDKGQLG 363
            HT  L  S G++YA+G G  GQLG
Sbjct: 382 -HTLGLVPSRGRVYAWGLGGAGQLG 405



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 19/270 (7%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           + A GA  T+ +++ GQ++++G ++  E + G+    L+   P +V +L    VVQ A G
Sbjct: 165 KVACGAHHTLAVNEWGQLFSWGSNA--EGQLGLNSKNLIECVPHMVRALGTSVVVQVACG 222

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
                 L+  G++Y++   +D +LG  T+  N+++P  L+ +L  +P+  I  G  + +A
Sbjct: 223 INHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPK-LISSLAGVPIAFITCGGYHSMA 281

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           ++   SG AV+  G    G+LG     +   PR ++  Q  N +    A G   +  +  
Sbjct: 282 IS--KSG-AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQ--NAKVCYAACGEEFSVFLTV 336

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF-VVSEDGDVYSF 287
           DG V T G G YG LGHGN   E +P+ V  L       ++ G   T  +V   G VY++
Sbjct: 337 DGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAW 396

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLV 317
           G G +  LG+N           +V TPQ+V
Sbjct: 397 GLGGAGQLGNNIT--------RSVATPQVV 418



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           +   P   R+L    ++Q A G    + +++ G++Y++G +S G+   G    K    P+
Sbjct: 201 IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTD-VKNEIKPK 259

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTL 151
           L+ SL  + +     G + +  +S+ G V  F WG +   +LG +   N   P  L  TL
Sbjct: 260 LISSLAGVPIAFITCGGYHSMAISKSGAV--FGWGKNTFGQLGLNDTRNRNLPRQL-QTL 316

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +N  V   A G  + + L        V++ G G+ G+LGHG+ ++E  PR +   +L+  
Sbjct: 317 QNAKVCYAACGEEFSVFLTVDG---GVFTCGAGMYGQLGHGNTSNEILPRQV--MELMGS 371

Query: 212 QPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
               ++ G  H   +V   GRV  WG G  G LG+      + P+VV 
Sbjct: 372 TVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVH 419



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 7/176 (3%)

Query: 30  LGREVNG--TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG +V     P    SL G+ I     G   +M IS +G V+ +GK++FG+   G+  T+
Sbjct: 248 LGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQL--GLNDTR 305

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
               P+ +++L+N  V  AA G  F+  L+ +G V+T   G   +LGH    N++ P  +
Sbjct: 306 NRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQV 365

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           +  L    V QI+ G  + L L   PS   VY+ G G  G+LG+        P+++
Sbjct: 366 M-ELMGSTVTQISCGKRHTLGLV--PSRGRVYAWGLGGAGQLGNNITRSVATPQVV 418



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 169 LACQPSGMAVYSV---------GCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVA 217
           LAC+P     YS          G  + G+LG G   DE    PR ++  +   ++ +  A
Sbjct: 60  LACEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQI--A 117

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G  +  ++ +DG+V + G   YG LGH  E+     +++  L+      VA G + T  
Sbjct: 118 CGENYTVLITRDGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLA 175

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           V+E G ++S+G      LG N+       ++     P +V +L      VVQ++   +  
Sbjct: 176 VNEWGQLFSWGSNAEGQLGLNS-------KNLIECVPHMVRALG--TSVVVQVACGIN-- 224

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGI 364
              H  ALT +GKLY++G+   GQLG+
Sbjct: 225 ---HVLALTNNGKLYSWGSNSDGQLGL 248


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 41/341 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL  R +  + +     G     L++  G V+ +G+DS G   +G +   +   P+LVES
Sbjct: 70  PLESRLV--LDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L    V   A G F T  ++  G +YT  WG    N   LGH T+     P  + G L+ 
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +PV  ++ G  +   +    S   +++ G G  G LGHG+ T    P+ +E   L  L+ 
Sbjct: 184 LPVAYVSCGTWHTALIT---SMGQLFTFGDGSFGVLGHGNLTSISCPKEVES--LSGLKT 238

Query: 214 VVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           + VA G WH A + +            G++ TWG G    LGHG++E    P  V +L D
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID 298

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                VA G   T  ++  G V S G         N++    GN +++   P LV   + 
Sbjct: 299 YDFYRVACGHSLTVCLTTSGKVLSMG---------NSVYGQLGNPNSDGRLPCLVED-RI 348

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             E V+Q++       + H   LT   +++ +G G  G+LG
Sbjct: 349 AGEHVLQVACG-----SYHVAVLTGRSEVFTWGKGANGRLG 384



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 19/240 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L G+ +   + G   T LI+  GQ++ FG  SFG   +G      ++ P+ VESL  + 
Sbjct: 180 ALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NLTSISCPKEVESLSGLK 237

Query: 103 VVQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  + + ++P   + +L
Sbjct: 238 TIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    ++A G+   +   C  +   V S+G  + G+LG+ + +D + P L+E  ++   
Sbjct: 297 IDYDFYRVACGHSLTV---CLTTSGKVLSMGNSVYGQLGNPN-SDGRLPCLVED-RIAGE 351

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             + VA G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 HVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACG 411



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 46/321 (14%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTS--------PQLVESLKNIFVVQAAIGNFFTAVLS 117
           G VY +G + F E    V    ++ S        P+ +ES   + V     G    A+++
Sbjct: 35  GDVYVWG-EVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVT 93

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R G V  F+WG D+  RLGH T  + V P  L+ +L    V  +A G  +  A+    + 
Sbjct: 94  RNGDV--FTWGEDSGGRLGHGTREDSVHPR-LVESLAACNVDFVACGEFHTCAVT---TT 147

Query: 176 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             +Y+ G G    G LGHG+      P+ I    L  L    V+ G WH A++   G++ 
Sbjct: 148 GELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTALITSMGQLF 206

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DG 282
           T+G G +G LGHGN    S PK V++L+ +K I VA G + T  + E            G
Sbjct: 207 TFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAG 266

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++++G G+   LGH       G++ +  L P  V SL  ++    +++  +S+     T
Sbjct: 267 KLFTWGDGDKHRLGH-------GDKESR-LKPTCVASL--IDYDFYRVACGHSL-----T 311

Query: 343 FALTESGKLYAFGAGDKGQLG 363
             LT SGK+ + G    GQLG
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLG 332


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 156/343 (45%), Gaps = 26/343 (7%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  E+   P  C    G R+     G   T  + + G VY  G +  G+  +     K  
Sbjct: 17  IDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGH----EKSR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+ V +L    +V  + G   T  L+ +G+V+++  G+D +LG +     +     + 
Sbjct: 73  KKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIK 132

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 208
           +L ++ V Q+A GY + LAL+    G  ++S G    G+LG G        P+ ++  Q 
Sbjct: 133 SLSDVQVAQVACGYWHSLALS---KGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQ- 188

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             +    +AAG  H+  +   G V  WG  ++G LG  +      P +++AL   + I++
Sbjct: 189 -GIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYI 247

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           + G+  T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   V 
Sbjct: 248 SCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGNVVT 297

Query: 329 QISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ 370
           QI+         HT A T  SGK+ +FG G  GQLG     N+
Sbjct: 298 QIACGRQ-----HTLAFTPSSGKMDSFGLGGNGQLGTRSTCNR 335



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  E      V     G   TA L  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++     I +V ++ G  + LAL  +     V+S G G  G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVALDAQI-IVALSCGESHTLALNDKGQ---VFSWGLGSDG 114

Query: 188 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  +  +  + PR I+   L ++Q   VA G WH+  + + G + +WG  RYG LG G
Sbjct: 115 QLGLNNFEECIRVPRNIK--SLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
              +  SVP+ +Q+L  +    +A G   +F ++  G V+ +G  +   LG N   D   
Sbjct: 173 MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDR-- 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ +L+  ++RV+ IS         HT ALT+ G ++ FGAG  GQLG  
Sbjct: 231 ------CFPALLKALR--SQRVIYISCGED-----HTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 STNHEV---NPRKV 288



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 5/163 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P + +SLQGI   Q AAG   +  ++ +G V+ +G++ FG+   G+  T     P L+++
Sbjct: 181 PQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQ--LGLNDTNDRCFPALLKA 238

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  V+  + G   TA L++EG V+TF  G   +LGH++  ++V P  +   + N+ V 
Sbjct: 239 LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV-VT 297

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           QIA G  + LA    PS   + S G G  G+LG  S  + K P
Sbjct: 298 QIACGRQHTLAFT--PSSGKMDSFGLGGNGQLGTRSTCNRKSP 338



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+  R+I  + G   T  ++  G V+ FG   +G+   G   T    +P+ V  
Sbjct: 233 PALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTNHEVNPRKVFE 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q A G   T A     G++ +F  G + +LG  +  N   P P+ G
Sbjct: 291 LMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKG 343


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 157/329 (47%), Gaps = 35/329 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +    +G+  ++ I D G ++ +G +  G   +  + TK    P  V++L N+ 
Sbjct: 34  ALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPE-TKTENIPSRVKALANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP-NDVEPHPLLGTL-------ENI 154
           + QAAIG +    +  +GR Y  +WG +       EP  D    P+   +         +
Sbjct: 93  ITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V Q+AAG  + + L  +     V++     G     G       P  ++  + + L   
Sbjct: 151 TVRQVAAGGTHSVVLTREGH---VWT----WGQPWPPGDIKQISVPVRVQGLENVRL--- 200

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A GA+H   + +DGR+  WG   YG LG G+ +  S P  VQ L+D+  + +A G + 
Sbjct: 201 -IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWH 259

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  +++ G+VY +G GE   LG   + D   N  ++ + PQ V  L +  E ++Q+S   
Sbjct: 260 STALTDKGEVYGWGRGEHGRLG---LGD---NDKSSKMVPQKVNLLAE--EDIIQVSCGG 311

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +     H+ ALT  G++++FG GD G+LG
Sbjct: 312 T-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 31/273 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVT 90
           P   ++L  ++I QAA G    + + D G+ YA+G + +G+        E G    + + 
Sbjct: 82  PSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIV 141

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHP 146
            P+       + V Q A G   + VL+REG V+T+        G    P D++    P  
Sbjct: 142 IPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQISVPVR 191

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           + G LEN+ ++ + A       LA +  G  + + G    G+LG G      HP  ++  
Sbjct: 192 VQG-LENVRLIAVGA----FHNLALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVQGL 245

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVK 264
             L L  V +AAG WH+  +   G V  WG G +G LG G+ +  S  VP+ V  L +  
Sbjct: 246 DDLTL--VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED 303

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            I V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 23/234 (9%)

Query: 27  RNLLGREVNGT---PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           ++ +GR V      P  C     +R  Q AAG   +++++  G V+ +G+       +  
Sbjct: 129 KDEMGRPVRRDIVIPKRCAPKLTVR--QVAAGGTHSVVLTREGHVWTWGQ------PWPP 180

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND 141
              K ++ P  V+ L+N+ ++  A+G F    L  +GR+   +WGN+   +LG       
Sbjct: 181 GDIKQISVPVRVQGLENVRLI--AVGAFHNLALEEDGRL--LAWGNNEYGQLGTGDTQPT 236

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P P+ G L+++ +V IAAG  +  AL  +     VY  G G  G+LG G   D+    
Sbjct: 237 SHPVPVQG-LDDLTLVDIAAGGWHSTALTDKGE---VYGWGRGEHGRLGLGD-NDKSSKM 291

Query: 202 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           + ++  LL  + ++ V+ G  H+  + +DGR+ ++G G +G LG+G +     P
Sbjct: 292 VPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 22/153 (14%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +  WG G  G LG G  E +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSIYWNAHTFALTES 348
             +LGH                 Q  T  + +  RV     + +T +     H  A+ + 
Sbjct: 67  RGTLGH-----------------QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           G+ YA+G  + GQ G E + +  E G P R DI
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 33/334 (9%)

Query: 37  TPL-YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           TP+ +C +   ++I+  A G  +T  + + G V+  G +  G+   G+  T  V S +LV
Sbjct: 36  TPISFCHN---VKILDVACGNEQTAFLFETGDVFTCGYNDSGQC--GIGSTSRVQSLRLV 90

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            +L  ++I  +++A G      +SR G +YTF + +  +LGH +  N +     +  L +
Sbjct: 91  PALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGST-NPITTPTKIKDLAS 149

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             VV++A  Y + + +  + +   +Y+ G    G+LG     D   P  +  F   N +P
Sbjct: 150 YHVVEVACSYFHTIVMTMEGT---LYAFGRNDLGQLGIDDGMDRHVPVPLTYF---NSRP 203

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQA-LNDVKAIHVAT 270
           V+ VA G  H  V   +G V  +G   +G LG G   +  + P ++ A L+ +    +A 
Sbjct: 204 VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLAC 263

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G Y T  ++E G VYSFG  +   LGH       G+RH ++  P L+ +L + +     +
Sbjct: 264 GYYHTIALAEHGSVYSFGRNDYGQLGH-------GHRH-HLSEPTLIKALAKTHA----V 311

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +T   Y   HT  L+E GK+Y FG  + GQLG+
Sbjct: 312 QVTCGCY---HTLVLSEDGKVYPFGRNNHGQLGL 342



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 18/288 (6%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           + I  I++A G      IS +G +Y FG +S G+  +G   T  +T+P  ++ L +  VV
Sbjct: 96  EDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG--STNPITTPTKIKDLASYHVV 153

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           + A   F T V++ EG +Y F   +  +LG     +   P PL     + PV+ +A G  
Sbjct: 154 EVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPL-TYFNSRPVLAVACGQH 212

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           + +      +   V + G    G+LG G   D    P L+    L +L    +A G +H 
Sbjct: 213 HTVV---SLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAA-PLDSLVVPSLACGYYHT 268

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             + + G V ++G   YG LGHG+    S P +++AL    A+ V  G Y T V+SEDG 
Sbjct: 269 IALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGK 328

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           VY FG      LG   + D          +PQ++ SL+  ++ VV+++
Sbjct: 329 VYPFGRNNHGQLGLGNLID--------CTSPQIIASLR--DKFVVKVA 366



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 136/297 (45%), Gaps = 23/297 (7%)

Query: 69  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           Y+FG++S+GE  +     + + +P  +    N+ ++  A GN  TA L   G V+T  + 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTP--ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 129 NDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
           +  +  +G  +    +   P L T E+I  ++ A G  +L A++   SG A+Y+ G    
Sbjct: 72  DSGQCGIGSTSRVQSLRLVPALVT-EDIAHIRSANGCEHLTAIS--RSG-ALYTFGFNSR 127

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGHGS      P  I+   L +   V VA   +H  V+  +G +  +G    G LG  
Sbjct: 128 GQLGHGSTNPITTPTKIKD--LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGID 185

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           +     VP  +   N    + VA G + T V   +G V +FG  +   LG     D    
Sbjct: 186 DGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLD---- 241

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            HA   +P L   L    + +V  SL    Y   HT AL E G +Y+FG  D GQLG
Sbjct: 242 YHA---SPSL---LAAPLDSLVVPSLACGYY---HTIALAEHGSVYSFGRNDYGQLG 289



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 19/189 (10%)

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           YS G    G+L H    D   P  I      N++ + VA G    A + + G V T G+ 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCH--NVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 239 RYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             G  G G+       ++V AL   D+  I  A G      +S  G +Y+FG      LG
Sbjct: 72  DSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
           H     G  N    + TP  +  L   +  VV+++ +   Y+  HT  +T  G LYAFG 
Sbjct: 132 H-----GSTNP---ITTPTKIKDLASYH--VVEVACS---YF--HTIVMTMEGTLYAFGR 176

Query: 357 GDKGQLGIE 365
            D GQLGI+
Sbjct: 177 NDLGQLGID 185



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 32/183 (17%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L     +Q   G   T+++S+ G+VY FG+++ G+   G+      TSPQ++ S
Sbjct: 299 PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQ--LGLGNLIDCTSPQIIAS 356

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV- 156
           L++ FVV+ A G + +  L+        S G+      HT   D      LG L N P+ 
Sbjct: 357 LRDKFVVKVASGFYHSICLTATKN----SVGSRMDTS-HTLCQD------LGKLVNNPMR 405

Query: 157 ---------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQF 206
                    VQI A  C ++A  C+P           LGG++  GS ++   P    E F
Sbjct: 406 SDLVFVLSGVQIHAHSCVVMA-RCEPLEKM-------LGGRMIEGSLSEINIPDYSPEVF 457

Query: 207 QLL 209
           Q+ 
Sbjct: 458 QVF 460


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 151/347 (43%), Gaps = 39/347 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           E+    L  ++L+   ++     A G    +L++  G+ +++G++S G   +GV     V
Sbjct: 290 EIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--V 347

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+L+++L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +  
Sbjct: 348 QHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF 407

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            +E I V  IA G  +   +    S   +++ G G  G LGHG R     PR ++   L 
Sbjct: 408 LMEGIHVSSIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LK 462

Query: 210 NLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            L+ V  A G WH A V +             G++ TWG G    LGHG++E + VP  V
Sbjct: 463 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV 522

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            AL +     VA G   T  ++  G VY+ G      LG         N HA+   P  V
Sbjct: 523 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV 573

Query: 318 TSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                  E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 574 -------EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 613



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 26/250 (10%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 409 MEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRT 466

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPH---PLL 148
           V+AA G + TA +               G+++T+  G+ +RLGH     D EP      +
Sbjct: 467 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCV 522

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L      Q+A G+   +AL    +   VY++G  + G+LG+    D K P  +E  +L
Sbjct: 523 AALVEPNFCQVACGHSLTVALT---TSGHVYTMGSPVYGQLGN-PHADGKVPTRVEG-KL 577

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
                  +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D +   +
Sbjct: 578 HKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637

Query: 269 ATGDYTTFVV 278
           A G   T  V
Sbjct: 638 ACGSNFTAAV 647



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 40/303 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 354

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 355 ALSTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 410

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 411 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 470

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 522

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 523 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 571

Query: 378 RVD 380
           RV+
Sbjct: 572 RVE 574



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 22/185 (11%)

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           Y VG  L  K+      D   P+ +E   +L++Q   +A G  HA +V + G   +WG  
Sbjct: 283 YRVGSSLEIKM------DSLLPKALESTIVLDVQ--YIACGGQHAVLVTKQGESFSWGEE 334

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LGHG +     PK++ AL+      VA G+Y +  V+  GD+Y++G G+   LGH 
Sbjct: 335 SEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGH- 393

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                 GN  ++ +        K+VN  +  I +++      HT  +T +G+L+ FG G 
Sbjct: 394 ------GNEVSHWVP-------KRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 440

Query: 359 KGQLG 363
            G LG
Sbjct: 441 FGVLG 445


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 157/348 (45%), Gaps = 46/348 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+++++G++S G   +G++    V +P+L+++L  + +   A G   
Sbjct: 304 ACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--VPNPKLIDTLAGMNIELVACGENH 361

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG+ A     LGH +E +   P  + G +E I V  ++ G  +  A
Sbjct: 362 TCAVTFSGDLYT--WGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAA 419

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG  +    PR +E   L  L+ + V+ G WH A   +
Sbjct: 420 VT---SVGQLFTFGDGTFGALGHGDHSSATVPREVET--LRGLRTIRVSCGVWHTAAAVE 474

Query: 229 D---------------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                           G++ TWG G    LGHG++E    P+ V AL D     VA G  
Sbjct: 475 ITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHN 534

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G VY+ G   S S G        GN  A    P +V    ++  ++++    
Sbjct: 535 LTLALTAAGRVYTMG---STSYGQ------LGNPRATGKVPAIVEG--KIAGKIIEEIAC 583

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            S     H   LT   ++Y +G G  GQLG     +  +R  P  VD 
Sbjct: 584 GSY----HVAVLTSKAEVYTWGKGTNGQLG---HGDNKDRNQPTVVDF 624



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 47/294 (15%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     ++++ G +  FSWG ++  RLGH  +  DV    L+ 
Sbjct: 289 PKALESKVVLDVHYIACGGRHAVLVTKPGEI--FSWGEESGGRLGHGIKA-DVPNPKLID 345

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-----CGLGGKLGHGSRTDEKHPRLIE 204
           TL  + +  +A G  +  A+    SG  +Y+ G     CGL   LGHGS      P+ I 
Sbjct: 346 TLAGMNIELVACGENHTCAVTF--SG-DLYTWGDGAYNCGL---LGHGSEASHWIPKRIG 399

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              +  +    V+ G WH A V   G++ T+G G +G LGHG+    +VP+ V+ L  ++
Sbjct: 400 G-DMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLR 458

Query: 265 AIHVATGDYTTFVVSED---------------GDVYSFGCGESASLGHNAIADGQGNRHA 309
            I V+ G + T    E                G ++++G G+   LGH       G++  
Sbjct: 459 TIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGH-------GDKEP 511

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +  P+ V +L   +E + Q++  +++     T ALT +G++Y  G+   GQLG
Sbjct: 512 RLF-PECVVALG--DENICQVACGHNL-----TLALTAAGRVYTMGSTSYGQLG 557



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 23/250 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   + G   T  ++  GQ++ FG  +FG   +G   +   T P+ VE+L+ +  
Sbjct: 402 MEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSS--ATVPREVETLRGLRT 459

Query: 104 VQAAIGNFFTAV---LSRE------------GRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           ++ + G + TA    ++ E            G+++T+  G++ RLGH  +   + P  ++
Sbjct: 460 IRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVV 519

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L +  + Q+A G+   LAL    +   VY++G    G+LG+  R   K P ++E  ++
Sbjct: 520 A-LGDENICQVACGHNLTLALT---AAGRVYTMGSTSYGQLGN-PRATGKVPAIVEG-KI 573

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
                  +A G++H AV+     V TWG G  G LGHG+ +  + P VV  L D +   V
Sbjct: 574 AGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAV 633

Query: 269 ATGDYTTFVV 278
           A G   T ++
Sbjct: 634 ACGSNFTAII 643



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +PK +++   +   ++A G     +V++ G+++S+G      LGH   AD        V 
Sbjct: 288 LPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKAD--------VP 339

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
            P+L+ +L  +N  +V            HT A+T SG LY +G G
Sbjct: 340 NPKLIDTLAGMNIELVACG-------ENHTCAVTFSGDLYTWGDG 377


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 158/342 (46%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q   G     L++  G+V+ +G+DS G   +G +  K    P LVE
Sbjct: 293 TPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFE--KDFGRPHLVE 350

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           SL    V   A G + +  +S  G ++T  WG+       LGH T+ +   P  + G LE
Sbjct: 351 SLAITNVTFVACGEYHSCAVSSSGDLFT--WGDGTHGAGLLGHGTDVSYWIPKRVSGPLE 408

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-L 211
            + VV +A G  +  ALA   S   ++++G G  G LGHG R    +P+   + QLL+  
Sbjct: 409 GLQVVSVACG-TWHSALAT--SNGKLFTIGDGRFGVLGHGDRDSVAYPK---EVQLLSGH 462

Query: 212 QPVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           + + VA G WH+A    V+G  G      R+ TWG G    LGH N+E    P  V A+ 
Sbjct: 463 KAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVA 522

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +     VA G   T  ++  G V++ G      LG N  +DG+         P LV   K
Sbjct: 523 EYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLG-NPNSDGK--------VPILVRG-K 572

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V E V +IS   +     H   LT   +LY +G G  G+LG
Sbjct: 573 LVGEFVEEISCGAN-----HVAVLTSRSELYTWGRGANGRLG 609



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 144/310 (46%), Gaps = 33/310 (10%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G+V+  G  S G        T ++T P+ +ES   + V Q   G+   A+++R+G V+T 
Sbjct: 269 GEVWVDGNSSDGLGSLASCKTDVLT-PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFT- 326

Query: 126 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
            WG D+  RLGH  E +   PH L+ +L    V  +A G  +  A++     +  +  G 
Sbjct: 327 -WGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCAVSSS-GDLFTWGDGT 383

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
              G LGHG+      P+ +    L  LQ V VA G WH+A+   +G++ T G GR+G L
Sbjct: 384 HGAGLLGHGTDVSYWIPKRVSG-PLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVL 442

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCGESA 293
           GHG+ +  + PK VQ L+  KAI VA G + +  + E             ++++G G+  
Sbjct: 443 GHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQY 502

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH              L P  V ++ + N   V    T        T ALT SG ++ 
Sbjct: 503 RLGH--------VNKETYLEPTCVAAVAEYNFHQVACGYT-------MTVALTTSGHVFT 547

Query: 354 FGAGDKGQLG 363
            G    GQLG
Sbjct: 548 MGGTAYGQLG 557



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 18/245 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++  G   FG   +G + +  V  P+ V+ L     
Sbjct: 407 LEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKA 464

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + +A +          +   R++T+  G+  RLGH  +   +EP  +    E 
Sbjct: 465 IKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAE- 523

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A GY   +AL    SG  V+++G    G+LG+ + +D K P L+ + +L+    
Sbjct: 524 YNFHQVACGYTMTVALTT--SGH-VFTMGGTAYGQLGNPN-SDGKVPILV-RGKLVGEFV 578

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ GA H AV+     + TWG G  G LGHG+ + +  P +V+AL D    +++ G  
Sbjct: 579 EEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGST 638

Query: 274 TTFVV 278
            T  +
Sbjct: 639 FTSCI 643


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 162/342 (47%), Gaps = 40/342 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    S   + + Q   G     L++  G+V+ +G++  G   +G+Q    ++ P+LVE
Sbjct: 241 TPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVE 298

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLE 152
            L    +   A G + T V+S  G +  FSWG    N   LGH ++ +   P  + G LE
Sbjct: 299 FLALTNIDFVACGEYHTCVVSTSGDL--FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLE 356

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V+ +A G  +  ALA   +   +++ G G  G LGHG+R    +P+ ++   L  L+
Sbjct: 357 GLQVLSVACG-TWHSALAT--ANGKLFTFGDGAFGVLGHGNRESVSYPKEVQS--LNGLK 411

Query: 213 PVVVAAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            V VA   WH A    V+GQ        ++ TWG G    LGHGN+E   +P  V +L D
Sbjct: 412 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
                +A G   T  ++  G V++ G      LG N+I+DG+         P LV   + 
Sbjct: 472 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGK--------LPCLVQD-RL 521

Query: 323 VNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           V E V +I+        AH  A LT   +++ +G G  G+LG
Sbjct: 522 VGEFVEEIAC------GAHHVAVLTSRSEVFTWGKGANGRLG 557



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 147/315 (46%), Gaps = 43/315 (13%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G+V+  G    G A      T ++T P+ +ES   + V Q   G    A+++R+G V+T 
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLT-PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFT- 274

Query: 126 SWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            WG +   RLGH  + +   P  +    L NI  V     +  +++ +       ++S G
Sbjct: 275 -WGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGD-----LFSWG 328

Query: 183 CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G+   G LGHGS      P+ +    L  LQ + VA G WH+A+   +G++ T+G G +
Sbjct: 329 DGIHNVGLLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSALATANGKLFTFGDGAF 387

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGDVYSFGCG 290
           G LGHGN E  S PK VQ+LN +K + VA   + T  + E             ++++G G
Sbjct: 388 GVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDG 447

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF--ALTES 348
           +   LGH       GN+   +L P  V+SL   N   +            HTF  ALT S
Sbjct: 448 DKNRLGH-------GNKETYLL-PTCVSSLIDYNFHKIAC---------GHTFTVALTTS 490

Query: 349 GKLYAFGAGDKGQLG 363
           G ++  G    GQLG
Sbjct: 491 GHVFTMGGTAHGQLG 505



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 22/244 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+SL  +  
Sbjct: 355 LEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKT 412

Query: 104 VQAA------------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+ A            +G   T++ SR  +++T+  G+  RLGH  +   + P   + +L
Sbjct: 413 VKVACSIWHTAAIVEVMGQTATSMSSR--KLFTWGDGDKNRLGHGNKETYLLP-TCVSSL 469

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+ + +AL    SG  V+++G    G+LG+ S +D K P L+ Q +L+  
Sbjct: 470 IDYNFHKIACGHTFTVALTT--SGH-VFTMGGTAHGQLGN-SISDGKLPCLV-QDRLVGE 524

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA H AV+     V TWG G  G LGHG+ E +  P +V+AL D     ++ G
Sbjct: 525 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 584

Query: 272 DYTT 275
              T
Sbjct: 585 SNFT 588


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 46/345 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTSPQL 94
           P    S   + +   A G     L++  G+V+ +G     + ++G  G K+   ++SP++
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWG-----QGKWGRLGQKIDMDISSPKI 349

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLLGT 150
           V+SL  + V   A G + T  L+  G VYT  WGND      L      +   P  L G 
Sbjct: 350 VDSLNGLHVKTVACGEYHTCALTDSGEVYT--WGNDVCCADLLNEGRTRSQWIPQRLGGP 407

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L+ I +  +A G  +   ++   S   +++ G G  G LGHG       P+ +E    L 
Sbjct: 408 LDGISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLR 464

Query: 211 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           ++    A G+WH A + +            G++ TWG G  G LGH +   + VP  V  
Sbjct: 465 VRSA--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQ 522

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L D   + V+ G   T  ++  G V++ G  +   L         GN HA     ++V  
Sbjct: 523 LVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL---------GNPHAR---DKVVIV 570

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             Q+ +  V++  T S     H   LT +G +Y +G G+ GQLG+
Sbjct: 571 EGQLKQEFVKVISTGSY----HVAVLTSAGSVYTWGRGEIGQLGL 611



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 26/272 (9%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           D++NE   +   + + + G       L GI I   A G   T ++S  G+++ +G  +FG
Sbjct: 388 DLLNEGRTRSQWIPQRLGG------PLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFG 441

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-----------SREGRVYTFS 126
              +G    +  +SP+ VESL  + V  AA G++ TA +           S  G+++T+ 
Sbjct: 442 VLGHG--DLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWG 499

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
            G++ RLGH    N + P   +  L +   VQ++ G    +AL    +   V+++G    
Sbjct: 500 DGDEGRLGHVDNGNKIVP-TRVTQLVDYDFVQVSCGRMLTVALT---NMGKVFAMGSAKY 555

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LG+    D+    +I + QL      V++ G++H AV+   G V TWG G  G LG G
Sbjct: 556 GQLGNPHARDKV---VIVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLG 612

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           + E    P  V+AL D +   +  G   T  +
Sbjct: 613 DTEDRYTPCFVEALRDRQVNTITCGPSFTAAI 644



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 15/103 (14%)

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           VPK++++   +   ++A G     +V++ G+V+ +G G+   LG     D        + 
Sbjct: 294 VPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMD--------IS 345

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           +P++V SL  ++ + V            HT ALT+SG++Y +G
Sbjct: 346 SPKIVDSLNGLHVKTVACG-------EYHTCALTDSGEVYTWG 381


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 46/364 (12%)

Query: 24  NGKRNLLGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           NG    LG+   E    P  C+S+Q ++ I  A G   T+++++ G+VYA G + +G+  
Sbjct: 16  NGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQL- 74

Query: 81  YGVQGTKLVTSPQL----VESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
               G  L T   +    VE L +       A G+F +A +S +GRVY +      +LG 
Sbjct: 75  ----GLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGL 130

Query: 136 HTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS- 193
                  V     + +L++  +  +A G  + LAL+ +     V S G  L G+LGHG  
Sbjct: 131 GKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGE---VLSWGTSLNGRLGHGEG 187

Query: 194 -----------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
                      ++ E  PRL++ F+  +++   VAAG  H+A + + G + T+G GR   
Sbjct: 188 HRSSSMFSIFRKSSEYTPRLVKGFR--DVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQ 245

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           LG G +   S PK V  +  V+ I  A G Y T  +S +G +Y +G  E   LG      
Sbjct: 246 LGLGGDRDISEPKRVPVIPPVEEI--ACGGYHTGAISRNGQLYMWGSNEYGCLGF----- 298

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG-AGDKGQ 361
             G +H N  +  ++      + RV Q+       W  HT ALT  G ++A+G  G +G 
Sbjct: 299 --GYKHQNATSLPMLVEGALESLRVTQVQCG----WK-HTMALTVDGDVFAWGWGGSQGT 351

Query: 362 LGIE 365
            G++
Sbjct: 352 HGVD 355



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 46/311 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +    AAG   +  IS+ G+VY +G+++ G+   G +G   V + Q VESLK+  +   A
Sbjct: 97  KFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALA 156

Query: 108 IGNFFTAVLSREGRVYTFSWGN--DARLGH------------HTEPNDVEPHPLLGTLEN 153
           +G   +  LS EG V   SWG   + RLGH              + ++  P  L+    +
Sbjct: 157 LGAEHSLALSEEGEV--LSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPR-LVKGFRD 213

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + V ++AAG   L   AC     ++++ G G   +LG G   D   P+ +         P
Sbjct: 214 VKVSKVAAG---LTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRV---------P 261

Query: 214 VV-----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQ-ALNDVKA 265
           V+     +A G +H   + ++G++  WG   YGCLG G  ++   S+P +V+ AL  ++ 
Sbjct: 262 VIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRV 321

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGES-ASLGHNAIADGQ----GNRHANVLTPQLVTSL 320
             V  G   T  ++ DGDV+++G G S  + G + ++ G     GN + + L P   T +
Sbjct: 322 TQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNEN-DFLEP---TQV 377

Query: 321 KQVNERVVQIS 331
           K  N + +QIS
Sbjct: 378 KSKNMKAIQIS 388



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G YG LG  + E    P V +++  ++ I +A G   T V++E+G VY+ G  +
Sbjct: 11  VALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLND 70

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LG               L+        +V     +   T+    + H+ A++E G++
Sbjct: 71  WGQLGLP-------------LSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRV 117

Query: 352 YAFGAGDKGQLGI 364
           Y +G   +GQLG+
Sbjct: 118 YMWGRNTQGQLGL 130


>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
          Length = 427

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+LVE L +  +V AA G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+LV  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGIFTEQVAMGYSHSLVIARD 407


>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
          Length = 427

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  VA GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKVACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  +F  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGVFTEQVAMGYSHSLVIARD 407


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 40/331 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L G+  I  A G   T  +   G V+A+G + +G+   G +  +L  +P  V 
Sbjct: 299 TPVQVPGLSGVTAI--AEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRL--TPVQVP 354

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            L ++  +  A G++ T  + ++G V+  +WG++   +LG  T  + + P  + G     
Sbjct: 355 DLTSVTAI--AAGDYHTLAVRQDGTVW--AWGDNVWGQLGDGTYTDRLTPVQVPGLTG-- 408

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  IAAG  + +A+    +   V++ G  + G+LG G+ TD   P      Q+ +L  V
Sbjct: 409 -VTAIAAGESHTVAMRQDGT---VWAWGDNVWGQLGDGTYTDRLTP-----VQVPDLTSV 459

Query: 215 V-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGD 272
             +AAG +H   V QDG VC WG+  YG LG G       P +V  L  V     +A GD
Sbjct: 460 TAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGD 519

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  V +DG V+++G   S  LG  A  D    R   V  P L               +
Sbjct: 520 SHTVAVMQDGTVWAWGLNASGQLGDGATID----RRIPVQIPGLA-------------GV 562

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           T     +AHT A  + G ++++GA   GQLG
Sbjct: 563 TAIAAGSAHTLAAGQDGAVWSWGANSYGQLG 593



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 159/351 (45%), Gaps = 54/351 (15%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L G+  I  AAG+  T+     G V+++G +S+G+   G    +L  SP  V  
Sbjct: 553 PVQIPGLAGVTAI--AAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRL--SPVQVPG 608

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEP---HPLLGTL 151
           L  +  +  A G+  +  L ++G V  +   SWG   +LG  T    + P   H L G  
Sbjct: 609 LTGVSAM--AAGDAHSVALLQDGTVSAWGRNSWG---QLGDGTTAARLTPVQVHGLTG-- 661

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               V  +AAG  + +AL    +   V++ G    G+LG G+ T     R +   Q+  L
Sbjct: 662 ----VTAVAAGSLHTVALRQDGT---VWAWGYNDLGQLGDGTTT-----RRLAPVQVQGL 709

Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
             V  +AAG +H   V QDG V  WG+  +G LG G+    S P  VQ L  V A+  A 
Sbjct: 710 TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSAL--AA 767

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   T  V +DG V+++G      LG+ +  D    R+    TP  V  L  V+      
Sbjct: 768 GYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTD----RY----TPVWVEGLTGVS------ 813

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           +LT   +   HT A++  G  +A+G  + GQ+G     + T    P  VD+
Sbjct: 814 ALTAGRF---HTAAVSPEGFGWAWGRNNFGQVG-----DGTTADRPRPVDV 856



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 154/346 (44%), Gaps = 44/346 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L G+  I  AAG   T  +S  G V+A+G + +G+   G +  +   +P  + 
Sbjct: 99  TPVQVPGLTGVTAI--AAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRH--TPVQLP 154

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L  +  +  A G   T  + ++G V+  +WG++A  +LG  T  N + P  + G     
Sbjct: 155 ELTGVTAI--AAGRRHTFAVRQDGTVW--AWGDNAWGQLGDGTRTNRLTPVQVPGLTG-- 208

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  IAAG  + LA+    +   V++ G    G+LG G+ T+   P      Q+  L  V
Sbjct: 209 -VTAIAAGDYHTLAVRQDGT---VWAWGNNALGQLGDGTYTERLTP-----VQVPGLTGV 259

Query: 215 V-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++AG  H   V QDG V  WG   +G LG G       P  V  L+ V AI  A G  
Sbjct: 260 TAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI--AEGRR 317

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            TF V +DG V+++G      LG    +D         LTP  V  L  V       ++ 
Sbjct: 318 HTFAVRQDGTVWAWGLNFWGQLGDGTRSD--------RLTPVQVPDLTSVT------AIA 363

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              Y   HT A+ + G ++A+G    GQLG       T+R  P +V
Sbjct: 364 AGDY---HTLAVRQDGTVWAWGDNVWGQLGD---GTYTDRLTPVQV 403



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 145/335 (43%), Gaps = 44/335 (13%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +    AG   T+ +   G  +A+G +++G+   G +  +L  +P  V  L  +  V  A 
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRL--TPVQVPGLTGVTAV--AA 64

Query: 109 GNFFTAVLSREGRVYTFS---WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
           G   T  + ++G V+ +    WG     G HTE +     P L       V  IAAG  +
Sbjct: 65  GRHHTFAVRQDGTVWAWGLNVWGQLGD-GTHTERHTPVQVPGL-----TGVTAIAAGRRH 118

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAA 224
             A++   +   V++ G    G+LG G+R D   P      QL  L  V  +AAG  H  
Sbjct: 119 TFAVSQDGT---VWAWGDNDWGQLGDGTRADRHTP-----VQLPELTGVTAIAAGRRHTF 170

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            V QDG V  WG   +G LG G       P  V  L  V AI  A GDY T  V +DG V
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAI--AAGDYHTLAVRQDGTV 228

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +++G      LG     DG    +   LTP  V  L  V      IS   S     HT A
Sbjct: 229 WAWGNNALGQLG-----DGT---YTERLTPVQVPGLTGVTA----ISAGES-----HTVA 271

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           + + G ++A+G    GQLG      +T+R  P +V
Sbjct: 272 VRQDGTVWAWGDNVWGQLGD---GTRTDRLTPVQV 303


>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
           africana]
          Length = 523

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 118 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCXSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 176

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 177 RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 234

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 235 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 290

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 291 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 350

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 351 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 410



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G    + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 140 PH-RYGCXSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 197

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 313

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 314 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 364



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 223

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 388

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 389 QIYAGYTC-----SFAVSEVGGLFFWGA 411



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGC         S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 138 WGPHRYGCX--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 182

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 183 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 227

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 228 GENKMGQLGL---GNQTD 242



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G +I   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 416 RESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 475

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 476 AQEVKTLDGIFTEQVAMGYSHSLVIARD 503


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ + D G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+ +      +  G    G+LG G    ++  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALSKEGE---FFCWGQNKYGQLGLGIDCKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+EG    F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKEGEF--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL        VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALN---DKGQVYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + ++G    WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYV----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S  G+ + +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDCKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYVPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 42/337 (12%)

Query: 41   CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
            CR+++    I  A G     L++  G+V+ +G+++ G   +G+Q    V+ P+LVE L  
Sbjct: 1079 CRTVK----IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVD--VSRPKLVEFLAL 1132

Query: 101  IFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPV 156
              +   A G + T  +S  G ++T  WG    N   LGH ++ +   P  + G +E + V
Sbjct: 1133 TNIDFVACGEYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQV 1190

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            + +A G  +  ALA   +   +++ G G  G LGHG R    +P+ ++   L  L+ + V
Sbjct: 1191 LSVACG-TWHSALAT--ANGKLFTFGDGAFGVLGHGDRESVSYPKEVK--MLSGLKTMKV 1245

Query: 217  AAGAWHAA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            A G WH      V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D    
Sbjct: 1246 ACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ 1305

Query: 267  HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
             +A G   T  ++  G V++ G      LG ++ +DG+         P LV   + V E 
Sbjct: 1306 QIACGHTLTVALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEF 1355

Query: 327  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V +IS  +      H   LT   +++ +G G  G+LG
Sbjct: 1356 VEEISCGDH-----HVAVLTSRSEVFTWGKGSNGRLG 1387



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 123/238 (51%), Gaps = 20/238 (8%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            ++G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+ L  +  
Sbjct: 1185 VEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRES--VSYPKEVKMLSGLKT 1242

Query: 104  VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            ++ A G + T     V+++ G      +++T+  G+  RLGH  +   + P   + +L +
Sbjct: 1243 MKVACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLID 1301

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
                QIA G+   +AL    +   V+++G    G+LG  S +D K P L+ Q +L+    
Sbjct: 1302 YNFQQIACGHTLTVALT---TSGHVFTMGGTSHGQLG-SSNSDGKLPCLV-QDRLVGEFV 1356

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVA 269
              ++ G  H AV+     V TWG G  G LGHG++E    P +V+AL +  VK+I  A
Sbjct: 1357 EEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 37/287 (12%)

Query: 53   AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG---------TKLVTSPQLVESLKNIFV 103
            A G   T  +S +G ++ +G    G    G+ G          K V+ P  VE L+   V
Sbjct: 1139 ACGEYHTCAVSTSGDLFTWGD---GIHNVGLLGHGSDLSHWIPKRVSGP--VEGLQ---V 1190

Query: 104  VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            +  A G + +A+ +  G+++TF  G    LGH    +   P  +   L  +  +++A G 
Sbjct: 1191 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEV-KMLSGLKTMKVACGV 1249

Query: 164  CYLLALA-------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             + +A+           S   +++ G G   +LGHG++     P  +      N Q +  
Sbjct: 1250 WHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQI-- 1307

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTT 275
            A G      +   G V T G   +G LG  N + + +P +VQ  L       ++ GD+  
Sbjct: 1308 ACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGK-LPCLVQDRLVGEFVEEISCGDHHV 1366

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
             V++   +V+++G G +  LGH    D +        TP LV +LK+
Sbjct: 1367 AVLTSRSEVFTWGKGSNGRLGHGDKEDRK--------TPTLVEALKE 1405


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 149/318 (46%), Gaps = 39/318 (12%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+   +G   ++ + +AG V+A+G +S G+   G    ++  +P  V  L ++  V A  
Sbjct: 102 IVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRV--TPMQVAGLTDVVAVAA-- 157

Query: 109 GNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
           G+F +  L  +G V+  +WG +   +LG  HTEP  + P P+ G LE   VV +AAG+ +
Sbjct: 158 GDFHSLALRGDGTVW--AWGTNFHGQLGRGHTEPG-LTPEPVPG-LEG--VVALAAGFDF 211

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LA+    +   V + G    G+LG G+ T    P  +     ++     V AG +HA  
Sbjct: 212 TLAVMDDGT---VRAWGANSSGQLGDGTFTQRLAPVEVAHISGIS----AVTAGTYHAVA 264

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           +G+DG V TWG    G LG G     +VP  V  L  VKA  VA+ D ++  + E G V 
Sbjct: 265 LGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVL 322

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G   S  LG +   D          TP  V  L+ V   V             H  AL
Sbjct: 323 AWGANGSGQLGDSGTDD--------RATPGEVPGLRSVAAVVGGAQ---------HALAL 365

Query: 346 TESGKLYAFGAGDKGQLG 363
              G L+A+G G  GQLG
Sbjct: 366 RGDGTLWAWGGGLAGQLG 383



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 133/328 (40%), Gaps = 37/328 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L+G+  +  AAG   T+ + D G V A+G +S G+   G    +L  +P  V 
Sbjct: 192 TPEPVPGLEGV--VALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRL--APVEVA 247

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            +  I  V A  G +    L ++G V+T+   +  +LG     +   P  + G      V
Sbjct: 248 HISGISAVTA--GTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKAV 305

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             + A    LL          V + G    G+LG     D   P  +   + +      V
Sbjct: 306 ASMDASSLALLEAGS------VLAWGANGSGQLGDSGTDDRATPGEVPGLRSV----AAV 355

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
             GA HA  +  DG +  WG G  G LGHG  E   VP  +  L DV ++  A G + + 
Sbjct: 356 VGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLADVASM--AAGSFHSL 413

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
               DG V+S+G      LG    A+    RHA V              RV  +S    +
Sbjct: 414 AALGDGTVWSWGRNTYGQLGDGTTAE----RHAAV--------------RVEGLSGIRGV 455

Query: 337 YWNA-HTFALTESGKLYAFGAGDKGQLG 363
             +  H+ A+   G ++A+G    GQLG
Sbjct: 456 AASGHHSLAVGADGTVWAWGRNAAGQLG 483



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 167/396 (42%), Gaps = 62/396 (15%)

Query: 28   NLLGREVNGTP----LYCRSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
            N LG+  +GT     ++ R +  +R ++A AAG   ++ +   G  +A+G + +G+   G
Sbjct: 1027 NTLGQLGDGTSAPTWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDG 1086

Query: 83   VQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
              G +L      +E+  L+       A      A+++ +G V   +WG++A  +LG  T 
Sbjct: 1087 KTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA-DGTVQ--AWGDNAHGQLGDGTT 1143

Query: 139  PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
                 P  + G      VV ++ G  + LAL    +   V++ G    G+LG G+     
Sbjct: 1144 ERRAAPVVVRGL---TGVVAVSTGAWHSLALRSDGT---VWAWGANGFGQLGDGTTLSRT 1197

Query: 199  HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             P  +   Q +    V + AG +HA  V  DG V  WG+  +G LG G  E   +P  V+
Sbjct: 1198 TPVRVAGLQKV----VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVE 1253

Query: 259  ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---------------------- 296
             L++V +  VA GD+ +  +  DG + ++G   +  LG                      
Sbjct: 1254 GLSNVTS--VAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEV 1311

Query: 297  -----HNAIADGQG-------NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTF 343
                 H     G G       N H+ +      T  + V   V  +S   +I   A H+F
Sbjct: 1312 RAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSF 1371

Query: 344  ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            A+   G ++A+G    GQLG+    +   R  P RV
Sbjct: 1372 AVGPKGTVWAWGRNSHGQLGL---GDNANRAEPLRV 1404



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 36/328 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  A G   TM +   G V+A+G ++ G+   G    +L  +P  V  L ++  V A  
Sbjct: 502 VVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRL--TPVRVARLDSVVAVAA-- 557

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G +F+  L  +G V+T+  G + ++G       + P  + G L N  V ++AAG  +  A
Sbjct: 558 GTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAG-LTN--VTRVAAGSAH--A 612

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           LA +  G  V++ G    G+LG G+ +D   P  +     +      V+ G  H+  +  
Sbjct: 613 LAVRGDGT-VWAWGDNGEGQLGDGTWSDRFRPVQVPGLTGIT----AVSGGRSHSMALHG 667

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V  WG+  YG LG G       P VV  L  ++A+H +        +  DG +  +G
Sbjct: 668 DGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPS--HLHVLALHADGTLRGWG 725

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG  A   G  +R      P  V  L +V+   V           AHT  +   
Sbjct: 726 YNRFGQLGLGAA--GWSSR------PVQVRGLGRVDRLAVG---------RAHTLMVRPD 768

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNP 376
           G + A+G    GQLG       T R  P
Sbjct: 769 GAVLAWGENASGQLGD---GTTTHRAGP 793



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 131/311 (42%), Gaps = 35/311 (11%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R+   A+    ++ + +AG V A+G +  G  + G  GT    +P  V  L+++  V   
Sbjct: 301 RVKAVASMDASSLALLEAGSVLAWGAN--GSGQLGDSGTDDRATPGEVPGLRSVAAVVG- 357

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G      L  +G ++ +  G   +LGH      V P PLL   +   V  +AAG  + L
Sbjct: 358 -GAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLAD---VASMAAGSFHSL 413

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           A     +   V+S G    G+LG G+ T E+H  + +E    +      VAA   H+  V
Sbjct: 414 AALGDGT---VWSWGRNTYGQLGDGT-TAERHAAVRVEGLSGIR----GVAASGHHSLAV 465

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           G DG V  WG    G LG G+    + P  V  L  V  + VATG   T  +  DG V++
Sbjct: 466 GADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLTSV--VAVATGGSHTMALRGDGTVWA 523

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G      LG     D         LTP  V  L  V      +++    Y    + AL 
Sbjct: 524 WGYNALGQLGDGTTVD--------RLTPVRVARLDSV------VAVAAGTY---FSMALR 566

Query: 347 ESGKLYAFGAG 357
             G ++ +G G
Sbjct: 567 GDGTVWTWGEG 577



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 22/263 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+    LQ  +++   AG    + +   G V+A+G ++FG+   G   ++L+  P  VE
Sbjct: 1198 TPVRVAGLQ--KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLL--PVRVE 1253

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
             L N+  V  A G+  +  L  +G +   +WGN+A  +LG  T         + G     
Sbjct: 1254 GLSNVTSV--AGGDHHSLALLADGSL--GAWGNNAAGQLGDGTGTTRYSRVWVKGV---D 1306

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             VV++ AG  + LAL    +   V++ G     +LG G   D    R++ +  +  L  V
Sbjct: 1307 GVVEVRAGAAHTLALRGDGT---VWTWGDNTHSQLGAGD--DSTRTRIVPR-PVPGLSGV 1360

Query: 215  V-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
              + AGA H+  VG  G V  WG   +G LG G+    + P  V+ L +V    V+ G  
Sbjct: 1361 TAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSV--VSGGAD 1418

Query: 274  TTFVVSEDGDVYSFGCGESASLG 296
             +  +  DG V S+G     +LG
Sbjct: 1419 FSLAMQRDGTVSSWGSSLHGALG 1441



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 42/350 (12%)

Query: 14   ILRPDIINERNGKRNLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQ 67
            ++RPD      G+ N  G+  +GT      P+  R +  +R +  A+G   ++ ++  G 
Sbjct: 764  MVRPDGAVLAWGE-NASGQLGDGTTTHRAGPVLVRGVPCVRSV--ASGVLHSLALACDGS 820

Query: 68   VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
            V+A+G +  G+   G   ++++  P  V+ L+    V A      +  L  +G  +  +W
Sbjct: 821  VWAWGANGRGQLGDGTTASRVI--PARVDGLQGAVAVAAG--GDASLALLADGTAW--AW 874

Query: 128  GNDA--RLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGC 183
            G +A  +LG  +  +   P  L      +P  ++ +A G  +   LA    G A+++ G 
Sbjct: 875  GANAHGQLGDGSTSDRAVPGQL-----KLPSNIMSVALGETH--GLAAGEDG-ALWAWGA 926

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
               G+LG GS T    P  ++  + +      V+AG   +  V QDG    WG    G L
Sbjct: 927  NGSGQLGEGSTTPSPTPVRVKGLEGV----ASVSAGRAFSLAVRQDGTAWAWGANPSGQL 982

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            G G    + VPK V ++  V+A+  + G +    + EDG V+++G      L       G
Sbjct: 983  GDGTNHSQRVPKQVTSVKRVRAM--SAGAHHVVALGEDGAVWTWGDNTLGQL-------G 1033

Query: 304  QGNRHANVLTPQLVTSLKQVNERVV--QISLTNSIYWNAHTFALTESGKL 351
             G      + P+ V  L+ V       Q S+   +   AH +   E G+L
Sbjct: 1034 DGTSAPTWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQL 1083



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 124/315 (39%), Gaps = 33/315 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + AAG+   + +   G V+A+G +  G+   G    +    P  V  L  I  V    
Sbjct: 602 VTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRF--RPVQVPGLTGITAVSG-- 657

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   +  L  +G V  + +    +LG  T  + V P  + G L  I  +  +  + ++LA
Sbjct: 658 GRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPG-LTGIQALHPS--HLHVLA 714

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    +   +   G    G+LG G+      P  +     ++     +A G  H  +V  
Sbjct: 715 LHADGT---LRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDR----LAVGRAHTLMVRP 767

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V  WG    G LG G     + P +V+ +  V++  VA+G   +  ++ DG V+++G
Sbjct: 768 DGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPCVRS--VASGVLHSLALACDGSVWAWG 825

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG            A+ + P  V  L+                    + AL   
Sbjct: 826 ANGRGQLGDGTT--------ASRVIPARVDGLQGAVAVAAGGDA---------SLALLAD 868

Query: 349 GKLYAFGAGDKGQLG 363
           G  +A+GA   GQLG
Sbjct: 869 GTAWAWGANAHGQLG 883



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 45/218 (20%)

Query: 166 LLALACQPSG-MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAAGAWHA 223
           LL +AC+P+G +A                    + PR     ++ +   P+ +AAG+ H+
Sbjct: 20  LLLVACEPTGELAAL------------------EQPRAARTQRITVTAPPMRIAAGSQHS 61

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             V   G V  WG    G LG      + + P  + +  D+  + V +G+  +  + E G
Sbjct: 62  LYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI--VSVVSGEAHSLALDEAG 119

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            V+++G   S  LG     D         +TP  V  L  V      +++    +   H+
Sbjct: 120 TVWAWGGNSSGQLGDGTTTD--------RVTPMQVAGLTDV------VAVAAGDF---HS 162

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTERG-NPERV 379
            AL   G ++A+G    GQLG       TE G  PE V
Sbjct: 163 LALRGDGTVWAWGTNFHGQLG----RGHTEPGLTPEPV 196


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 61/343 (17%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            +V+ +G +S  +   G   T++   P+LV SL ++  V+A  G + T ++  +G V   
Sbjct: 342 SEVFMWGSNSSNQHAEG--ATEVTDIPRLVRSLSDVQQVEA--GQYCTFIIDTKGCVSAC 397

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCG 184
              +  RLG     N  +P P    + N  + Q+++   C   +LA   +G  VYS G G
Sbjct: 398 GKNSYGRLGLGNSSN--QPVPKRINI-NCKIKQVSSSKGCDGHSLALSDTG-EVYSWGDG 453

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
             GKLGHG     K P+LI Q   +     +V+AG  H+A V  DG++ TWG G +G LG
Sbjct: 454 DYGKLGHGDVATHKEPKLI-QGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLG 512

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGH-NAI-- 300
           HG+     +P +V++L+D+   +VA G   T   S DG+ V+SFG G++  LGH N I  
Sbjct: 513 HGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRL 572

Query: 301 ---ADGQGNRHANV-------------------------------------LTPQLVTSL 320
                 +G RH  +                                      +P +V  L
Sbjct: 573 YKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSPAVVEDL 632

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            Q  + ++ IS+ +S     H  ALT +  +YA+G+  KGQ G
Sbjct: 633 MQ--QMIIDISVGDS-----HCLALTRNCAVYAWGSNGKGQCG 668



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 177  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTW 235
             V S G G  G+LGHG      +  +I   Q   +  V  + G+  H+  + + G V +W
Sbjct: 3446 TVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505

Query: 236  GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
            G G +G LGHGN E +  PK++++L DV  I VA G   + V+S+DG+VY FG  E   L
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKL 3565

Query: 296  GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
            G           H N   P  +     +N + +            HT  + E   ++AFG
Sbjct: 3566 GLGG--------HINKKRPTKIVHKGFLNIKYIACG-------QNHTICIGE-NVVWAFG 3609

Query: 356  AGDKGQLGI 364
             G+ G+LGI
Sbjct: 3610 EGEGGKLGI 3618



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 50/320 (15%)

Query: 43   SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  I Q +   G    ++ +++ G+V+++G   FG+  +G    +    P+L+ESL 
Sbjct: 3474 ALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHG--NNERQRKPKLIESLY 3531

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            ++ V+Q A G+  +AVLS++G VY F      +LG     N   P  +           +
Sbjct: 3532 DVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKI-----------V 3580

Query: 160  AAGYCYLLALACQPSGM------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              G+  +  +AC  +         V++ G G GGKLG GS+ D   P+ I      N++ 
Sbjct: 3581 HKGFLNIKYIACGQNHTICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKK 3640

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-------PKVVQALNDVKAI 266
                 G      + +DG +       Y C     ++   V       P+ +         
Sbjct: 3641 AYCGNG--FTMFLSEDGEL-------YSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVT 3691

Query: 267  HVATGDYTTFVVSEDGDVYSFG--CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
             VATG     V++  G V+++G  C      GH+            V  P ++  L   N
Sbjct: 3692 DVATGPDHVLVLTARGHVWAWGNNCEGILGFGHD----------LPVQKPMIIQILSDKN 3741

Query: 325  ERVVQISLTNSIYWNAHTFA 344
             + +  S T+   W A  F+
Sbjct: 3742 IKQIATSRTHCAAWTAEPFS 3761



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 22/145 (15%)

Query: 235  WGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
            WG GR G LG     +C ++   ++  N   A  +  G   TFV++  G V S G G   
Sbjct: 3397 WGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNYG 3456

Query: 294  SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
             LGH     G  +   N+    ++++L    +  V   ++ SI  + H+ ALTE+G++++
Sbjct: 3457 RLGH-----GHSDSLPNL---TMISAL----QGFVITQVSTSIGSDGHSLALTETGEVFS 3504

Query: 354  FGAGDKGQLGIELVNNQTERGNPER 378
            +G GD G+LG          GN ER
Sbjct: 3505 WGDGDFGKLG---------HGNNER 3520



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 15/237 (6%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL  + +IQ A G   + ++S  G+VY FG    G+   G    K   +  + + 
Sbjct: 3524 PKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKG 3583

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIP 155
              NI  +  A G   T  +  E  V+ F  G   +LG  ++ +   P  ++ TL  +NI 
Sbjct: 3584 FLNIKYI--ACGQNHTICIG-ENVVWAFGEGEGGKLGIGSKKDIYVPQEII-TLNGKNIK 3639

Query: 156  VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
                  G+   L+         +YS G            T++  P  I +FQ    Q V 
Sbjct: 3640 KAYCGNGFTMFLS-----EDGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQ---GQIVT 3691

Query: 216  -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             VA G  H  V+   G V  WG    G LG G++     P ++Q L+D     +AT 
Sbjct: 3692 DVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATS 3748



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVE 96
           P     L+  +I + AAG   ++ ++  G+V+ +G+ S      G   +++ + SP +VE
Sbjct: 575 PQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGS----NLGCGSSEITLFSPAVVE 630

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
            L    ++  ++G+     L+R   VY  +WG++ +     GH T P    P  ++  LE
Sbjct: 631 DLMQQMIIDISVGDSHCLALTRNCAVY--AWGSNGKGQCGQGHSTSPVS-RPSKVIN-LE 686

Query: 153 NIPVVQIAAGYCYLLALACQP 173
              + QI+AG  + +A    P
Sbjct: 687 GKQINQISAGTSHSVAWTTLP 707


>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
 gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
          Length = 520

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 115 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 173

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+LVE L +  +V AA G   T  L+  G V+ F      +
Sbjct: 174 RNEKGQLGHG--DTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 231

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 232 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 287

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 288 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 347

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 407



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 385

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+LV  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 413 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 472

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 473 AQEVKTLDGIFTEQVAMGYSHSLVIARD 500


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 38/331 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L +  G+V+A+G++  G   +G      ++ P+LVE+L    V   
Sbjct: 255 LDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD--ISRPKLVEALAVSNVEYI 312

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LG+    +   P  + G LE + V+ ++ G
Sbjct: 313 ACGEFHTCAVTASGDLYT--WGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCG 370

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +    A   S   V++ G G  G LGHG R    +P+ +E   L   + + VA G WH
Sbjct: 371 SWHS---ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEA--LSGFRTMKVACGLWH 425

Query: 223 AAVVGQDG----------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           +A + +            ++ TWG G    LGHG+++   VP  VQ+L D     VA G 
Sbjct: 426 SAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGH 485

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  +S  G V++ G   +  LG N  +DG+         P  V   +   E V +IS 
Sbjct: 486 SMTIALSTSGHVFTMGSSSNGQLG-NPKSDGK--------QPIPVQD-RLSGELVEEISC 535

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + H   LT   ++Y +G G  G+LG
Sbjct: 536 G-----SCHVAVLTSRSEVYTWGMGANGRLG 561



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 152/322 (47%), Gaps = 43/322 (13%)

Query: 62  ISDAGQVYAFGK------DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           I   G VY +G+       + G   Y      ++  P+ +ES   + V Q A G    A+
Sbjct: 211 IESLGDVYVWGEVWTDVIPAEGSTNYLCSKADILI-PKPLESDVVLDVQQIACGYRHIAL 269

Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
            +R+G V  F+WG +   RLGH T+ +   P  L+  L    V  IA G  +  A+    
Sbjct: 270 TTRQGEV--FAWGEELGGRLGHGTDADISRPK-LVEALAVSNVEYIACGEFHTCAVT--- 323

Query: 174 SGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
           +   +Y+ G G    G LG+G+      P+ +    L  +Q + V+ G+WH+A+    G+
Sbjct: 324 ASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSG-PLEGVQVLSVSCGSWHSALTTSSGK 382

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-------- 283
           V T+G G +G LGHG  E    PK V+AL+  + + VA G + +  + E  +        
Sbjct: 383 VFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVIS 442

Query: 284 --VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
             +Y++G G+   LGH       G++ +  L P  V SL  ++    Q++  +S+     
Sbjct: 443 RKLYTWGAGDKNQLGH-------GDKDSR-LVPTCVQSL--IDYSFHQVACGHSM----- 487

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T AL+ SG ++  G+   GQLG
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLG 509



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 128/247 (51%), Gaps = 23/247 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  + G+  + L + +G+V+ FG  +FG   +G + T  V  P+ VE+L     
Sbjct: 359 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRET--VGYPKEVEALSGFRT 416

Query: 104 VQAAIGNFFTA------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++ A G + +A            V+SR  ++YT+  G+  +LGH  + + + P   + +L
Sbjct: 417 MKVACGLWHSAAIVESSNHVSINVISR--KLYTWGAGDKNQLGHGDKDSRLVP-TCVQSL 473

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL+   +   V+++G    G+LG+  ++D K P  + Q +L   
Sbjct: 474 IDYSFHQVACGHSMTIALS---TSGHVFTMGSSSNGQLGN-PKSDGKQPIPV-QDRLSGE 528

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ G+ H AV+     V TWG G  G LGHG  E +  P +V+AL D     +A G
Sbjct: 529 LVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACG 588

Query: 272 -DYTTFV 277
            ++TT +
Sbjct: 589 SNFTTCI 595


>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
          Length = 655

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 250 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 308

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 309 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 366

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 367 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 422

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 423 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 482

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 483 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 542



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 272 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 329

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 330 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 385

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 386 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 445

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 446 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 496



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL     
Sbjct: 297 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT---E 352

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
             +V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 353 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 408

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 409 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 468

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 469 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 520

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 521 QIYAGYTC-----SFAVSEVGGLFFWGA 543



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 270 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 314

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 315 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 359

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 360 GENKMGQLGL---GNQTD 374



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 548 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 607

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 608 AQEVKTLDGIFTEQVAMGYSHSLVIARD 635


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 41/334 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ- 105
           + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVESL     V  
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVESLTATSSVDF 338

Query: 106 AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G LE + V  +  
Sbjct: 339 VACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTC 396

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  +   +    S   +++ G G  G LGHG R   ++PR +E   L  L+ + V+ G W
Sbjct: 397 GPWHTALIT---SYGRLFTFGDGTFGVLGHGDRETVQYPREVES--LSGLRTIAVSCGVW 451

Query: 222 HAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           H A V +             G++ TWG G    LGHG+++    P  V AL D     +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G V++ G      LG N   DG+         P LV   K  +E V +
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KLASEFVEE 561

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 562 ISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 21/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+ +     G   T LI+  G+++ FG  +FG   +G + T  V  P+ VESL  +  
Sbjct: 386 LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRET--VQYPREVESLSGLRT 443

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           +  + G + TA +               G+++T+  G+  RLGH  +   ++P   +  L
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPAL 502

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+   + L    SG  V+++G  + G+LG+  +TD K P L+E  +L + 
Sbjct: 503 IDYNFHKIACGHSLTVGLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLASE 557

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               ++ GA+H A +     V TWG G  G LGHG+ E   VP +V+AL D    ++A G
Sbjct: 558 FVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACG 617

Query: 272 -DYTTFV 277
            +YT  +
Sbjct: 618 SNYTAAI 624



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 37/291 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  L    V  G WH A++   GR+ T+G G +G LGHG+ E    P+ V++L+ ++
Sbjct: 384 GC-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLR 442

Query: 265 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V +L  ++    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 KPTCVPAL--IDYNFHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 157/348 (45%), Gaps = 46/348 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G    +L++  G+V+++G++      +GV+    V+ P+L+++L  + +   A G + 
Sbjct: 298 ACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYH 355

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           +  ++  G +YT  WG    N   LGH +E +   P  + G +E + V  +A G  +   
Sbjct: 356 SCAVTLSGDLYT--WGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAV 413

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    S   +++ G G  G LGHG  +    PR +E   L   + + VA G WH A V +
Sbjct: 414 VT---SAGQLFTFGDGTFGALGHGDHSSMSIPREVEA--LRGQRTMRVACGVWHTAAVVE 468

Query: 229 ---------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                           G++ TWG G  G LGHG++E   VP+ V AL +     VA G  
Sbjct: 469 LMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHN 528

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++  G VY+ G      LG + +ADG+         P LV   K  N  V +++  
Sbjct: 529 LSVALTTSGRVYTMGSAVYGQLG-SPVADGK--------IPTLVEG-KIANSFVEEVACG 578

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           +      H   LT   ++Y +G G  GQLG     +   R  P  VD 
Sbjct: 579 S-----YHVAVLTSKTEVYTWGKGTNGQLGH---GDNDHRNTPTLVDF 618



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 37/289 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G V  FSWG +  +RLGH  E  DV    L+ 
Sbjct: 283 PKALESTVVLDVHSIACGGKHAVLVTKKGEV--FSWGEECGSRLGHGVEV-DVSHPKLID 339

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L  + +  +A G  +  A+      +  +  G    G LGHGS      P+ +    + 
Sbjct: 340 ALCGMNIELVACGEYHSCAVTLS-GDLYTWGDGTHNSGLLGHGSEASHWIPKKVSG-PME 397

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    VA G WH AVV   G++ T+G G +G LGHG+    S+P+ V+AL   + + VA
Sbjct: 398 GMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVA 457

Query: 270 TGDYTTFVVSE---------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
            G + T  V E                G ++++G G+   LGH       G++    L P
Sbjct: 458 CGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGH-------GDKEPR-LVP 509

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           Q VT+L  +NE   Q++  +++     + ALT SG++Y  G+   GQLG
Sbjct: 510 QSVTAL--INESFCQVACGHNL-----SVALTTSGRVYTMGSAVYGQLG 551



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 23/251 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++G+ +   A G   T +++ AGQ++ FG  +FG   +G   +  ++ P+ VE+L+    
Sbjct: 396 MEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSS--MSIPREVEALRGQRT 453

Query: 104 VQAAIGNFFTAVL---------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           ++ A G + TA +               S  G+++T+  G+  RLGH  +   + P  + 
Sbjct: 454 MRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVT 513

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             L N    Q+A G+   L++A   SG  VY++G  + G+LG     D K P L+E  ++
Sbjct: 514 A-LINESFCQVACGHN--LSVALTTSGR-VYTMGSAVYGQLG-SPVADGKIPTLVEG-KI 567

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            N     VA G++H AV+     V TWG G  G LGHG+ +  + P +V  L D +  +V
Sbjct: 568 ANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627

Query: 269 ATGDYTTFVVS 279
             G   T  +S
Sbjct: 628 VCGLNFTAAIS 638


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 93  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 151

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E+L +  +V AA G   T  L+  G V+ F      +
Sbjct: 152 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 209

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 210 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 265

Query: 193 S---------RTD---EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S         R +   E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 266 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 325

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 326 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 385



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 115 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 172

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 173 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 228

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 229 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 288

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 289 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 339



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 140 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 198

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 199 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 251

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 311

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 312 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 363

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 364 QIYAGYTC-----SFAVSEVGGLFFWGA 386



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 113 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 157

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 158 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 202

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 203 GENKMGQLGL---GNQTD 217



 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 391 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 450

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 451 AQEVKTLDGIFSEQVAMGYSHSLVIARD 478


>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
          Length = 521

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G ++++G
Sbjct: 116 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGTLWSWG 174

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 175 RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 232

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 233 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 288

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 289 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 348

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 349 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWG 408



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 138 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-TLWSWGRNEKGQLGHGDTKRVEAPKLI 195

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 196 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 251

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 252 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 311

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 312 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 362



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG ++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 163 LITTEGTLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 221

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 222 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 274

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 334

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 335 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAA 386

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 387 QIYAGYTC-----SFAVSEVGGLFFWGA 409



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 136 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGTLWSWGRNEKGQ 180

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 181 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 225

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 226 GENKMGQLGL---GNQTD 240



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 414 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 473

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 474 AQEVKTLDGIFTEQVAMGYAHSLVIARD 501


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 149/343 (43%), Gaps = 42/343 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S+  + +   A G     L++  G+V+++G++  G   +G  G      P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L N+ +   A G + T  ++  G +YT  WG    N   LGH  + +   P  + G L+ 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + +  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469

Query: 214 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +     VA G   T  ++  G +Y+ G      LG N  ADG+         P  V    
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576

Query: 322 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
              E  +  S    +   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 42/309 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES+  + V   A GN   A+++++G V  FSWG +   RLGH  + +   P  L+ 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            L N+ +  +A G  +  A+    SG  +Y+ G G    G LGHG       P+ +    
Sbjct: 356 ALSNLNIELVACGEYHTCAVTL--SG-DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-P 411

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  L    ++ G WH A+V   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ + 
Sbjct: 412 LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVR 471

Query: 268 VATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            A G + T  V E             G ++++G G+   LGH       G++ A  L P 
Sbjct: 472 AACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPT 523

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N Q +   
Sbjct: 524 CVAALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKL 572

Query: 376 PERVDIDLS 384
           P RV+  LS
Sbjct: 573 PARVEGKLS 581



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG+ I   + G   T L++ AG+++ FG  +FG   +G + +  ++ P+ VESLK +  
Sbjct: 412 LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRT 469

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +            +  G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAAL 528

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    +   +Y++G  + G+LG+  + D K P  +E  +L   
Sbjct: 529 VEPNFCQVACGHSLTVALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKS 583

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 584 FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACG 643

Query: 272 DYTTFVV 278
              T  +
Sbjct: 644 TNFTAAI 650



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S+ D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG +    
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 310
            PK++ AL+++    VA G+Y T  V+  GD+Y++G G   S  LGH     G+   H  
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              P+ VT   Q     + IS  +   W  HT  +T +GKL+ FG G  G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 153/334 (45%), Gaps = 41/334 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ- 105
           + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVESL     V  
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVESLTATSSVDF 338

Query: 106 AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE + V  ++ 
Sbjct: 339 VACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSC 396

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+ + V+ G W
Sbjct: 397 GPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVES--LSGLRTIAVSCGVW 451

Query: 222 HAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           H A V +             G++ TWG G    LGHG+++    P  V AL D     +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G V++ G      LG N   DG+         P LV   K  +E V +
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KLASEFVEE 561

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 562 ISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 21/248 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G+ +   + G   T LI+  G+++ FG  +FG   +G + T  V  P+ VESL  + 
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLR 442

Query: 103 VVQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            +  + G + TA +               G+++T+  G+  RLGH  +   ++P   +  
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPA 501

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L +    +IA G+   + L    SG  V+++G  + G+LG+  +TD K P L+E  +L +
Sbjct: 502 LIDYNFHKIACGHSLTVGLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLAS 556

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                ++ GA+H A +     V TWG G  G LGHG+ E   VP +V+AL D    ++A 
Sbjct: 557 EFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616

Query: 271 G-DYTTFV 277
           G +YT  +
Sbjct: 617 GSNYTAAI 624



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 37/291 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 384 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 442

Query: 265 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 37/287 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGN 110
           A G   T  ++ AG++Y +G  +      G  G+ +      ++  SL+ + V   + G 
Sbjct: 340 ACGEFHTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCY 165
           + TA+++  GR++TF  G    LGH  +     P +VE      +L  +  + ++ G  +
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVE------SLSGLRTIAVSCGVWH 452

Query: 166 LLALA---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             A+             S   +++ G G   +LGHG +     P  +      N   +  
Sbjct: 453 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 512

Query: 217 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
                H+  VG    G+V T G   YG LG+   + +    V   L       ++ G Y 
Sbjct: 513 G----HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 568

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
              ++   +VY++G G +  LGH  + D +         P +V +LK
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRK--------VPTIVEALK 607


>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
          Length = 520

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 115 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 173

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 174 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 231

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 232 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 287

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 288 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 347

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 407



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 220

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 385

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 413 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 472

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 473 AQEVKTLDGIFTEQVAMGYSHSLVIARD 500


>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
          Length = 484

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 79  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 137

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E+L +  +V AA G   T  L+  G V+ F      +
Sbjct: 138 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 195

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 196 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 251

Query: 193 S---------RTD---EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDG 230
           S         R +   E  PR +  F       Q+L +  VV   VA GA H  V+    
Sbjct: 252 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQK 311

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 312 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 371



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 28/297 (9%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP--------- 139
           V+   + + LK+ F+++  I  F       +G++  F   N   +G    P         
Sbjct: 35  VSKGTIFQRLKSAFLLKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNL 94

Query: 140 --NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             N   PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     
Sbjct: 95  GQNLWGPH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRV 152

Query: 198 KHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           + PRLIE    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP  
Sbjct: 153 EAPRLIEA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSP 208

Query: 257 VQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANV 311
            Q + + + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   
Sbjct: 209 AQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCE 268

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
           L P+ V    +  +    + + N ++ +      HT  L    +++++G G  G+LG
Sbjct: 269 LVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLG 325



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V  +HV
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHV 297

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 349

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 99  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 377 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 436

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 437 AQEVKTLDGIFSEQVAMGYSHSLVIARD 464


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 152/336 (45%), Gaps = 42/336 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G+    L++  G V+ +G++  G   +G+     V+ PQLV++L  +     A G+F 
Sbjct: 286 ACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD--VSEPQLVQALAGVNTELVACGDFH 343

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG DA+    +GH    +   P  +   LE + +  IA G  +   
Sbjct: 344 TCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTAL 401

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           ++   S   +++ G G  G LGHG + +   P+ +E   L  L+ V  A G WH A V +
Sbjct: 402 VS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEVES--LKGLKTVRAACGIWHTAAVVE 456

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G    LGHG++E + VP  V AL D     VA G   T 
Sbjct: 457 VIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTV 516

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G V++ G      LG N  ADG+         P +V       +  +  +    I
Sbjct: 517 ALTTSGRVFTMGSTIYGQLG-NPKADGK--------VPGMV-------DGELARTFVEEI 560

Query: 337 YWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQT 371
              AH   AL+   ++Y +G G  G+LG   V ++T
Sbjct: 561 GCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRT 596



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+RI   A GA  T L+S AGQ++ FG  +FG   +G +  + +  P+ VESLK +  
Sbjct: 384 LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKT 441

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 442 VRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAAL 500

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL    SG  V+++G  + G+LG+  + D K P +++  +L   
Sbjct: 501 VDYNFRQVACGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELART 555

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +  GA H A +     + TWG G  G LGHG+ E  + P +V+AL D +   VA G
Sbjct: 556 FVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACG 615

Query: 272 DYTTFVV 278
              T V+
Sbjct: 616 SSFTAVI 622



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +++   + V   A G+   A+++++G V  F WG +   RLGH  + +  EP  L+ 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 327

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L  +    +A G  +  A+      +  +      GG +GH +      P+ +    L 
Sbjct: 328 ALAGVNTELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 385

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            ++   +A GAWH A+V   G++ T+G G +G LGHG++   ++PK V++L  +K +  A
Sbjct: 386 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 445

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 446 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 497

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L   N R  Q++  +S+     T ALT SG+++  G+   GQLG    N + +   P 
Sbjct: 498 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 546

Query: 378 RVDIDLS 384
            VD +L+
Sbjct: 547 MVDGELA 553



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 11/173 (6%)

Query: 24  NGKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           +G +  LG   +E    P    +L      Q A G   T+ ++ +G+V+  G   +G+  
Sbjct: 477 DGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG 536

Query: 81  YGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
                 K+   P +V+  L   FV +   G    A LS +  +YT+  G + RLGH    
Sbjct: 537 NPKADGKV---PGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVE 593

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--QPSGMAVYSVGCGLGGKLG 190
           +   P  L+  L +  V  +A G  +  A+ C  +P   A  SV  G     G
Sbjct: 594 DRTAPT-LVEALRDKQVKTVACGSSF-TAVICLHKPVSDADQSVCSGCKQAFG 644


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 153/334 (45%), Gaps = 41/334 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ- 105
           + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVESL     V  
Sbjct: 286 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVESLTATSSVDF 343

Query: 106 AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE + V  ++ 
Sbjct: 344 VACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSC 401

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+ + V+ G W
Sbjct: 402 GPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVES--LSGLRTIAVSCGVW 456

Query: 222 HAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           H A V +             G++ TWG G    LGHG+++    P  V AL D     +A
Sbjct: 457 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 516

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G V++ G      LG N   DG+         P LV   K  +E V +
Sbjct: 517 CGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KLASEFVEE 566

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 567 ISC--GAY---HVAALTSRNEVYTWGKGANGRLG 595



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 21/248 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G+ +   + G   T LI+  G+++ FG  +FG   +G + T  V  P+ VESL  + 
Sbjct: 390 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLR 447

Query: 103 VVQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            +  + G + TA +               G+++T+  G+  RLGH  +   ++P   +  
Sbjct: 448 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPA 506

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L +    +IA G+   + L    SG  V+++G  + G+LG+  +TD K P L+E  +L +
Sbjct: 507 LIDYNFHKIACGHSLTVGLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLAS 561

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                ++ GA+H A +     V TWG G  G LGHG+ E   VP +V+AL D    ++A 
Sbjct: 562 EFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 621

Query: 271 G-DYTTFV 277
           G +YT  +
Sbjct: 622 GSNYTAAI 629



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 37/291 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 274 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 331

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 332 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 388

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 389 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 447

Query: 265 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 448 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 499

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 500 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 543



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 37/287 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGN 110
           A G   T  ++ AG++Y +G  +      G  G+ +      ++  SL+ + V   + G 
Sbjct: 345 ACGEFHTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCY 165
           + TA+++  GR++TF  G    LGH  +     P +VE      +L  +  + ++ G  +
Sbjct: 404 WHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVE------SLSGLRTIAVSCGVWH 457

Query: 166 LLALA---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             A+             S   +++ G G   +LGHG +     P  +      N   +  
Sbjct: 458 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 517

Query: 217 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
                H+  VG    G+V T G   YG LG+   + +    V   L       ++ G Y 
Sbjct: 518 G----HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 573

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
              ++   +VY++G G +  LGH  + D +         P +V +LK
Sbjct: 574 VAALTSRNEVYTWGKGANGRLGHGDLEDRK--------VPTIVEALK 612


>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
          Length = 427

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E      +  V  A G  H   + + G V  +G  + G LG GN+  ++VP   Q + + 
Sbjct: 102 EGLSHETI--VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNG 158

Query: 264 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
           + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V 
Sbjct: 159 QPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 218

Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
              +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 219 IFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HETIVSAACGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKTVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  +F  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGVFTEQVAMGYSHSLVIARD 407


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 153/334 (45%), Gaps = 41/334 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ- 105
           + + Q A G      ++  G+++ +G++S G   +G+   K V  P+LVESL     V  
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFHPRLVESLTATSSVDF 338

Query: 106 AAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            A G F T  ++  G +YT  WG    N   LGH ++ +   P  + G+LE + V  ++ 
Sbjct: 339 VACGEFHTCAVTLAGELYT--WGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSC 396

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  +   +    S   +++ G G  G LGHG +   ++PR +E   L  L+ + V+ G W
Sbjct: 397 GPWHTALIT---SYGRLFTFGDGTFGVLGHGDKETVQYPREVES--LSGLRTIAVSCGVW 451

Query: 222 HAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           H A V +             G++ TWG G    LGHG+++    P  V AL D     +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G V++ G      LG N   DG+         P LV   K  +E V +
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGK--------LPCLVED-KLASEFVEE 561

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           IS     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 562 ISC--GAY---HVAALTSRNEVYTWGKGANGRLG 590



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 21/248 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G+ +   + G   T LI+  G+++ FG  +FG   +G + T  V  P+ VESL  + 
Sbjct: 385 SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLR 442

Query: 103 VVQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            +  + G + TA +               G+++T+  G+  RLGH  +   ++P   +  
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP-TCVPA 501

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L +    +IA G+   + L    SG  V+++G  + G+LG+  +TD K P L+E  +L +
Sbjct: 502 LIDYNFHKIACGHSLTVGLTT--SGQ-VFTMGSTVYGQLGN-LQTDGKLPCLVED-KLAS 556

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                ++ GA+H A +     V TWG G  G LGHG+ E   VP +V+AL D    ++A 
Sbjct: 557 EFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616

Query: 271 G-DYTTFV 277
           G +YT  +
Sbjct: 617 GSNYTAAI 624



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 37/291 (12%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
           V  P+ +ES   + V Q A G    A ++R+G ++T  WG ++  RLGH    +   P  
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFT--WGEESGGRLGHGIGKDVFHPRL 326

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIE 204
           +        V  +A G  +  A+        +Y+ G G    G LGHGS      P+ I 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTL---AGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  L    V+ G WH A++   GR+ T+G G +G LGHG++E    P+ V++L+ ++
Sbjct: 384 G-SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR 442

Query: 265 AIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            I V+ G + T  V E             G ++++G G+   LGH       G++    L
Sbjct: 443 TIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGH-------GDKDPR-L 494

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V +L   N    +I+  +S+     T  LT SG+++  G+   GQLG
Sbjct: 495 KPTCVPALIDYN--FHKIACGHSL-----TVGLTTSGQVFTMGSTVYGQLG 538



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 37/287 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGN 110
           A G   T  ++ AG++Y +G  +      G  G+ +      ++  SL+ + V   + G 
Sbjct: 340 ACGEFHTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLENIPVVQIAAGYCY 165
           + TA+++  GR++TF  G    LGH  +     P +VE      +L  +  + ++ G  +
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVE------SLSGLRTIAVSCGVWH 452

Query: 166 LLALA---------CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             A+             S   +++ G G   +LGHG +     P  +      N   +  
Sbjct: 453 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 512

Query: 217 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
                H+  VG    G+V T G   YG LG+   + +    V   L       ++ G Y 
Sbjct: 513 G----HSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 568

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
              ++   +VY++G G +  LGH  + D +         P +V +LK
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRK--------VPTIVEALK 607


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 151/347 (43%), Gaps = 39/347 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           E+    L  ++L+   ++     A G    +L++  G+ +++G++S G   +GV     V
Sbjct: 329 EIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--V 386

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+L+++L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +  
Sbjct: 387 QHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF 446

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            +E I V  IA G  +   +    S   +++ G G  G LGHG R     PR ++   L 
Sbjct: 447 LMEGIHVSSIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LK 501

Query: 210 NLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            L+ V  A G WH A V +             G++ TWG G    LGHG++E + VP  V
Sbjct: 502 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV 561

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            AL +     VA G   T  ++  G VY+ G      LG         N HA+   P  V
Sbjct: 562 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV 612

Query: 318 TSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                  +  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 613 -------DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 652



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 40/306 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 393

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 394 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 449

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 450 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 509

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 510 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 561

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 562 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 610

Query: 378 RVDIDL 383
           RVD  L
Sbjct: 611 RVDGKL 616



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 36/255 (14%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 448 MEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRT 505

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+ +RLGH  +   + P   +  L
Sbjct: 506 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP-TCVAAL 564

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HPRLI 203
                 Q+A G+   +AL    SG  VY++G  + G+LG+        +R D K H   +
Sbjct: 565 VEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFV 621

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E+          +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L D 
Sbjct: 622 EE----------IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDK 671

Query: 264 KAIHVATGDYTTFVV 278
           +   +A G   T  V
Sbjct: 672 QVKSIACGSNFTAAV 686



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V  P+ V  
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV--PKRVNF 446

Query: 98  L-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L + I V   A G + TAV++  G+++TF  G    LGH    +   P  +  +L+ +  
Sbjct: 447 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV-DSLKGLRT 505

Query: 157 VQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           V+ A G  +  A+     G           +++ G G   +LGHG    +K P+L+    
Sbjct: 506 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHG----DKEPKLVPTCV 561

Query: 208 LLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              ++P        H+  V     G V T G   YG LG+ + + +   +V   L+    
Sbjct: 562 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFV 621

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             +A G Y   V++   +VY++G G +  LGH    D          +P LV SLK
Sbjct: 622 EEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRN--------SPTLVESLK 669


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 12/266 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L G R+   A G   T++ +  GQ++AFG++  G+   G+   +    PQLV +
Sbjct: 106 PCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQC--GLGSIQDCLEPQLVTA 163

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   VV  A G   +  ++ EG VY + WG    +G   E  D     L   LE + V 
Sbjct: 164 LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGD-GESQDRHLPTLAKGLEGVKVA 222

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           Q+  G+ + +A+     G A+Y+ G G   +L  G R D   P+ +E      +Q V   
Sbjct: 223 QVNCGWRHSIAV---DEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-----VQQVATV 274

Query: 218 AGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AG W H       GR+   GW ++G  G G+ E     + V+AL   + + V +G   T 
Sbjct: 275 AGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTM 334

Query: 277 VVSEDGDVYSFGCGESASLGHNAIAD 302
            V+  G  +S+G   +  LGH+ + D
Sbjct: 335 AVTHTGKFFSWGRNVNGQLGHSGMQD 360



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 36/327 (11%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
           L C S   + +I   +G+           V ++G+   G+  +G    +    PQ V SL
Sbjct: 12  LACGSSHSLALISTPSGS----------MVLSWGRGEDGQLGHGDAEDR--QEPQAVFSL 59

Query: 99  KNIFVVQAAIG-NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            +        G  +  AV   + +VY++ WG+  RLG     +   P PL   L    V 
Sbjct: 60  LHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLP-ALAGRRVA 118

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G  + L    +     +++ G    G+ G GS  D   P+L+   Q    + V VA
Sbjct: 119 SVACGDTHTLVATAEGQ---LFAFGRNQNGQCGLGSIQDCLEPQLVTALQ--GKEVVAVA 173

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            GA H+  V  +G V  WGWGRYG +G G  +   +P + + L  VK   V  G   +  
Sbjct: 174 CGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIA 233

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           V E G +Y++G G  A L        QG+R  + + P+ V +++QV         T +  
Sbjct: 234 VDEGGAMYTWGWGAYAQL-------MQGDRKDHYV-PKRVEAVQQV--------ATVAGG 277

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGI 364
           W  HT A    G+L+A G    GQ G+
Sbjct: 278 WR-HTMAADSQGRLFASGWNKFGQCGV 303



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +LQG  ++  A GA  +M ++  G+VY +G   +G    G    + +  P L + 
Sbjct: 158 PQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHL--PTLAKG 215

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PV 156
           L+ + V Q   G   +  +   G +YT+ WG  A+L       D + H +   +E +  V
Sbjct: 216 LEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQ----GDRKDHYVPKRVEAVQQV 271

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A G+ + +A   Q     +++ G    G+ G G   D      ++Q + L  + VV 
Sbjct: 272 ATVAGGWRHTMAADSQGR---LFASGWNKFGQCGVGHNEDVVR---VQQVEALAGERVVQ 325

Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
               W H   V   G+  +WG    G LGH   +  + P  + AL+
Sbjct: 326 VKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAALS 371



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 16/142 (11%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 290
           V +WG G  G LGHG+ E    P+ V +L    A  V  G +Y+  V   D  VYS+G G
Sbjct: 31  VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWG 90

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
           +   LG   + D        V  P  + +L     RV  ++  ++     HT   T  G+
Sbjct: 91  DFGRLGTGDVKD--------VFIPCPLPAL--AGRRVASVACGDT-----HTLVATAEGQ 135

Query: 351 LYAFGAGDKGQLGIELVNNQTE 372
           L+AFG    GQ G+  + +  E
Sbjct: 136 LFAFGRNQNGQCGLGSIQDCLE 157


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 149/343 (43%), Gaps = 42/343 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S+  + +   A G     L++  G+V+++G++  G   +G  G      P+L+++
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHG--GDSDAHHPKLIDA 356

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L N+ +   A G + T  ++  G +YT  WG    N   LGH  + +   P  + G L+ 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYT--WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + +  I+ G  +    A   S   +++ G G  G LGHG R     PR +E   L  L+ 
Sbjct: 415 LHISSISCGPWHT---ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVES--LKGLRT 469

Query: 214 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALV 529

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           +     VA G   T  ++  G +Y+ G      LG N  ADG+         P  V    
Sbjct: 530 EPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NPQADGK--------LPARV---- 576

Query: 322 QVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
              E  +  S    +   A H   LT   ++Y +G G  G+LG
Sbjct: 577 ---EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 42/309 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +ES+  + V   A GN   A+++++G V  FSWG +   RLGH  + +   P  L+ 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEV--FSWGEEYGGRLGHGGDSDAHHPK-LID 355

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL--GGKLGHGSRTDEKHPRLIEQFQ 207
            L N+ +  +A G  +  A+    SG  +Y+ G G    G LGHG       P+ +    
Sbjct: 356 ALSNLNIELVACGEYHTCAVTL--SG-DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTG-P 411

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  L    ++ G WH A+V   G++ T+G G +G LGHG+ +  S+P+ V++L  ++ + 
Sbjct: 412 LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVR 471

Query: 268 VATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            A G + T  V E             G ++++G G+   LGH       G++ A  L P 
Sbjct: 472 AACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGH-------GDKEAR-LVPT 523

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            V +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N Q +   
Sbjct: 524 CVAALVEPN--FCQVACGHSL-----TVALTNSGHIYTMGSPVYGQLG----NPQADGKL 572

Query: 376 PERVDIDLS 384
           P RV+  LS
Sbjct: 573 PARVEGKLS 581



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG+ I   + G   T L++ AG+++ FG  +FG   +G + +  ++ P+ VESLK +  
Sbjct: 412 LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDS--ISIPREVESLKGLRT 469

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +            +  G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 470 VRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP-TCVAAL 528

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+   +AL    +   +Y++G  + G+LG+  + D K P  +E  +L   
Sbjct: 529 VEPNFCQVACGHSLTVALT---NSGHIYTMGSPVYGQLGN-PQADGKLPARVEG-KLSKS 583

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D +   +A G
Sbjct: 584 FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACG 643

Query: 272 DYTTFVV 278
              T  +
Sbjct: 644 TNFTAAI 650



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S+ D   P+ +E   +L++Q +  A G  HAA+V + G V +WG    G LGHG +    
Sbjct: 292 SKIDSLLPKALESVVVLDVQNI--ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAH 349

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG--ESASLGHNAIADGQGNRHAN 310
            PK++ AL+++    VA G+Y T  V+  GD+Y++G G   S  LGH     G+   H  
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-----GKDVSH-- 402

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              P+ VT   Q     + IS  +   W  HT  +T +GKL+ FG G  G LG
Sbjct: 403 -WVPKRVTGPLQ----GLHISSISCGPW--HTALVTSAGKLFTFGDGTFGVLG 448


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 95  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 153

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E+L +  +V AA G   T  L+  G V+ F      +
Sbjct: 154 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 211

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 212 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 267

Query: 193 S---------RTD---EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S         R +   E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 268 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 327

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 328 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 387



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 117 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 174

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 175 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 230

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 231 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 290

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 291 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 341



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 142 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 200

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 201 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 253

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 313

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 314 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 365

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 366 QIYAGYTC-----SFAVSEVGGLFFWGA 388



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 115 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 159

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 160 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 204

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 205 GENKMGQLGL---GNQTD 219



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 393 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 452

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 453 AQEVKTLDGIFSEQVAMGYSHSLVIARD 480


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 151/347 (43%), Gaps = 39/347 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           E+    L  ++L+   ++     A G    +L++  G+ +++G++S G   +GV     V
Sbjct: 295 EIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--V 352

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+L+++L    +   A G + +  ++  G +YT+  G+   LGH  E +   P  +  
Sbjct: 353 QHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF 412

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            +E I V  IA G  +   +    S   +++ G G  G LGHG R     PR ++   L 
Sbjct: 413 LMEGIHVSSIACGPYHTAVVT---SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDS--LK 467

Query: 210 NLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            L+ V  A G WH A V +             G++ TWG G    LGHG++E + VP  V
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCV 527

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            AL +     VA G   T  ++  G VY+ G      LG         N HA+   P  V
Sbjct: 528 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPHADGKVPTRV 578

Query: 318 TSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                  +  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 579 -------DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 618



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 40/306 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V   A G     +++++G   +FSWG ++  RLGH  + N   P  L+ 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNVQHPK-LID 359

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L    +  +A G  +  A+    SG  +Y+ G G  G LGHG+      P+ +  F + 
Sbjct: 360 ALNTTNIELVACGEYHSCAVTL--SG-DLYTWGKGDFGILGHGNEVSHWVPKRV-NFLME 415

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    +A G +H AVV   G++ T+G G +G LGHG+ +   +P+ V +L  ++ +  A
Sbjct: 416 GIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 475

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+ + LGH       G++    L P  V
Sbjct: 476 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH-------GDKEPK-LVPTCV 527

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L + N    Q++  +S+     T ALT SG +Y  G+   GQLG    N   +   P 
Sbjct: 528 AALVEPN--FCQVACGHSL-----TVALTTSGHVYTMGSPVYGQLG----NPHADGKVPT 576

Query: 378 RVDIDL 383
           RVD  L
Sbjct: 577 RVDGKL 582



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 42/258 (16%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   A G   T +++ AGQ++ FG  +FG   +G +  K V  P+ V+SLK +  
Sbjct: 414 MEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVFIPREVDSLKGLRT 471

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPH---PLL 148
           V+AA G + TA +               G+++T+  G+ +RLGH     D EP      +
Sbjct: 472 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGH----GDKEPKLVPTCV 527

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-------SRTDEK-HP 200
             L      Q+A G+   +AL    SG  VY++G  + G+LG+        +R D K H 
Sbjct: 528 AALVEPNFCQVACGHSLTVALTT--SGH-VYTMGSPVYGQLGNPHADGKVPTRVDGKLHK 584

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
             +E+          +A GA+H AV+     V TWG G  G LGHG+ +  + P +V++L
Sbjct: 585 SFVEE----------IACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESL 634

Query: 261 NDVKAIHVATGDYTTFVV 278
            D +   +A G   T  V
Sbjct: 635 KDKQVKSIACGSNFTAAV 652



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 27/296 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L    I   A G   +  ++ +G +Y +GK  FG   +G + +  V  P+ V  
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV--PKRVNF 412

Query: 98  L-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L + I V   A G + TAV++  G+++TF  G    LGH    +   P  +  +L+ +  
Sbjct: 413 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV-DSLKGLRT 471

Query: 157 VQIAAGYCYLLALACQPSGM---------AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           V+ A G  +  A+     G           +++ G G   +LGHG    +K P+L+    
Sbjct: 472 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHG----DKEPKLVPTCV 527

Query: 208 LLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              ++P        H+  V     G V T G   YG LG+ + + +   +V   L+    
Sbjct: 528 AALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFV 587

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             +A G Y   V++   +VY++G G +  LGH    D          +P LV SLK
Sbjct: 588 EEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRN--------SPTLVESLK 635


>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
          Length = 464

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + +   A  ++LI+  G+++++G
Sbjct: 59  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVQVRSVVSGPCAAHSLLITAEGKLWSWG 117

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G VY F      +
Sbjct: 118 RNEKGQLGHG--DTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQ 175

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 176 LGLGNQ-TDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 231

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 232 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 291

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 292 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSETGGLFFWG 351



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 81  PH-RYGCLSGVQVRSVVSGPCAAHSLLITAEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 138

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E   +L  + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 139 E---VLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQT-DAVPSPTQIMYN 194

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 195 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 254

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 255 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 305



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 134/330 (40%), Gaps = 67/330 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 60  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL-------------- 105

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL   
Sbjct: 106 --LITAEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET 162

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 230
            S   VY+ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 163 GS---VYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 215

Query: 231 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 266
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 216 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 275

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 276 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 327

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             QI    +      +FA++E+G L+ +GA
Sbjct: 328 AAQIYAGYTC-----SFAVSETGGLFFWGA 352



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 79  WGPHRYGCL--------SGVQVRSVVSGPCAAH-------SLLITAEGKLWSWGRNEKGQ 123

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G +YAF
Sbjct: 124 LGH-----GDTKR---VEAPKLIEVLG--SEAIVLAACGRN-----HTLALTETGSVYAF 168

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 169 GENKMGQLGL---GNQTD 183



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G +I   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 357 RESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 416

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I+  Q A+G   + V++R+
Sbjct: 417 AQEVKTLDGIYTEQVAMGYAHSLVIARD 444


>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
          Length = 484

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 79  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 137

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E+L +  +V AA G   T  L+  G V+ F      +
Sbjct: 138 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 195

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 196 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 251

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 252 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 311

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 312 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 371



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 101 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 158

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 159 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 214

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 215 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 274

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 275 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 325



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 126 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 184

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 185 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 297

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 298 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 349

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 350 QIYAGYTC-----SFAVSEVGGLFFWGA 372



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 99  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 143

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 144 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 188

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 189 GENKMGQLGL---GNQTD 203



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 377 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 436

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 437 AQEVKTLDGIFSEQVAMGYSHSLVIARD 464


>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 439

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 19/309 (6%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           +++  P     L  + +++ AAG   +++++    VY+FG++ +G    G    +   +P
Sbjct: 138 QMHYVPERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRW--TP 195

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            LVE+L+   +VQ   G+  +A +++ G+V  F WG+  R       ND     L+  L 
Sbjct: 196 TLVEALRGEEIVQVVAGDTNSAAITKSGQV--FMWGS-CRSCIDLPSNDPTKPTLVEALS 252

Query: 153 NIPVVQIAAGYCYLLALACQ----PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             P+  +A G C+ L L         G+ +Y  G  LG  +    R +++ PR I  F  
Sbjct: 253 GTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGL-LGYDVRDNPRKEQRVPRPIPHFT- 310

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-------SVPKVVQALN 261
                  +AAG  H+ V+ +DGR+  +G  R G LG G    E        +P  V AL 
Sbjct: 311 -GEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALA 369

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            V+   V      +  ++ DG VYSFG GE   LGH         +  + L P  +TS+ 
Sbjct: 370 HVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIA 429

Query: 322 QVNERVVQI 330
                 + +
Sbjct: 430 STRAHTLAL 438



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 152/357 (42%), Gaps = 36/357 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK------LVTS 91
           P    +L+G+RI   AAG   ++ ++D GQVYA G  S   ++ G  G +      +   
Sbjct: 84  PARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGV-SLNGSQLGFAGCREEDLCQMHYV 142

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ V  L ++ VV+ A G   + VL+    VY+F       LG     N   P  L+  L
Sbjct: 143 PERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEAL 201

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               +VQ+ AG     + A   SG       C     L      D   P L+E    L+ 
Sbjct: 202 RGEEIVQVVAGDTN--SAAITKSGQVFMWGSCRSCIDL---PSNDPTKPTLVEA---LSG 253

Query: 212 QPV-VVAAGAWHAAVVGQDGRVCTWGWGRY--GCLGH----GNEECESVPKVVQALNDVK 264
            P+  VA G  H   +  DG V + G   Y  G LG+       + + VP+ +       
Sbjct: 254 TPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEV 313

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
           A  +A G+  + V++ DG +++FG   S  LG      G+ +   NV  P   T L    
Sbjct: 314 AAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGL-----GRTSPELNVSKP---TELPSPV 365

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 380
             +  + +   +    H+ A+   G +Y+FG G+  QLG    +  T+  N P+++D
Sbjct: 366 AALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLG----HGTTDSWNVPKKID 418


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 156/364 (42%), Gaps = 50/364 (13%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           I+NER     +  R  +  P    S   + +   A G     L +  G+V+ +G      
Sbjct: 280 IVNERF----VQPRIYSLVPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWG-----H 330

Query: 79  AEYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA---- 131
            ++G  G K+   ++SP++V+SL  + V   A G + T  L+  G VYT  WGND     
Sbjct: 331 GKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYT--WGNDVCCAD 388

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
            L      +   P  L G+L+ I +  +A G  +   ++   S   +++ G G  G LGH
Sbjct: 389 LLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVS---SCGRLFTYGDGTFGVLGH 445

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRY 240
           G       P+ +E    L ++    A G+WH A +              G++ TWG G  
Sbjct: 446 GDLRSYSSPKEVESLSGLRVRSA--ACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDE 503

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           G LGH +   + VP  V  L D   + V+ G   T  ++  G V++ G  +   L     
Sbjct: 504 GRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL----- 558

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
               GN HA     + V    Q+ +  V++  T S     H   LT  G +Y +G G+ G
Sbjct: 559 ----GNPHAR---DKAVMVEGQLKQEFVKVISTGSY----HVAVLTSGGSVYTWGRGENG 607

Query: 361 QLGI 364
           QLG+
Sbjct: 608 QLGL 611



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 20/248 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL GI I   A G   T ++S  G+++ +G  +FG   +G    +  +SP+ VESL  + 
Sbjct: 407 SLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHG--DLRSYSSPKEVESLSGLR 464

Query: 103 VVQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V  AA G++ TA +           S  G+++T+  G++ RLGH    + + P   +  L
Sbjct: 465 VRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQL 523

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +   VQ++ G    +AL    +   V+++G    G+LG+    D+    ++ + QL   
Sbjct: 524 VDYDFVQVSCGRMLTVALT---NMGKVFAMGSAKYGQLGNPHARDKA---VMVEGQLKQE 577

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              V++ G++H AV+   G V TWG G  G LG G+ E    P  V+AL D +   +  G
Sbjct: 578 FVKVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCG 637

Query: 272 DYTTFVVS 279
              T  +S
Sbjct: 638 PSFTAAIS 645


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 144/326 (44%), Gaps = 39/326 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+V+ +G +S G   +GV     V  P+LVE+L        A G + 
Sbjct: 313 ACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVD--VAHPKLVEALATTNTEFVACGEYH 370

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           +  ++  G ++T  WG+       LGH  + +   P  + G LE I V  +A   C +  
Sbjct: 371 SCAVTLSGDLFT--WGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVA---CGVWH 425

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-- 226
            A   S   +++ G G  G LGHG +     P+ +E   L  L+ V VA G WH A V  
Sbjct: 426 TALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVE--SLKGLKTVRVACGVWHTAAVVE 483

Query: 227 ---------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
                    G  G++ TWG G  G LGHG++E + VP  V AL D     VA G   T  
Sbjct: 484 VMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVA 543

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           ++ +G V++ G      LG +  ADG+         P LV        R+ +  +     
Sbjct: 544 LTINGRVFTMGSSLYGQLG-DVRADGK--------LPGLVEG------RLWEAFVEEIAC 588

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLG 363
              H   LT   ++Y +G G  G+LG
Sbjct: 589 GAYHVAVLTAKTEVYTWGKGANGRLG 614



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 19/246 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GIR+   A G   T L++ AGQ++ FG  +FG   +G +  + V  P+ VESLK +  
Sbjct: 411 LEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDK--RSVALPKEVESLKGLKT 468

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           V+ A G + TA +              G+++T+  G+  RLGH  +   + P   +  L 
Sbjct: 469 VRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVP-TCVAALV 527

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    Q+A G+   +AL        V+++G  L G+LG   R D K P L+E  +L    
Sbjct: 528 DYNFKQVACGHTLTVALTIN---GRVFTMGSSLYGQLGD-VRADGKLPGLVEG-RLWEAF 582

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +A GA+H AV+     V TWG G  G LGHG+    + P +V+AL + +   VA G 
Sbjct: 583 VEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGS 642

Query: 273 YTTFVV 278
             T  +
Sbjct: 643 GFTAAI 648



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 36/311 (11%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G V+ +G +S G  + G++   L+  P+ +ES   + V   A GN   A+++++G V  F
Sbjct: 275 GDVFLWG-ESVGSGDGGIKTDSLL--PKALESAVVLDVHHIACGNRHAALVTKQGEV--F 329

Query: 126 SWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
            WG+++  RLGH  + +   P  L+  L       +A G  +  A+      +  +  G 
Sbjct: 330 CWGDESGGRLGHGVDVDVAHPK-LVEALATTNTEFVACGEYHSCAVTLS-GDLFTWGDGT 387

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
              G LGHG+      P+ +    L  ++   VA G WH A+V   G++ T+G G +G L
Sbjct: 388 HSYGLLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVL 446

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGES 292
           GHG++   ++PK V++L  +K + VA G + T  V E            G ++++G G+ 
Sbjct: 447 GHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDK 506

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH       G++    L P  V +L   N +  Q++  +++     T ALT +G+++
Sbjct: 507 GRLGH-------GDKEQK-LVPTCVAALVDYNFK--QVACGHTL-----TVALTINGRVF 551

Query: 353 AFGAGDKGQLG 363
             G+   GQLG
Sbjct: 552 TMGSSLYGQLG 562



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 8/150 (5%)

Query: 24  NGKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           +G +  LG   +E    P    +L      Q A G   T+ ++  G+V+  G   +G+  
Sbjct: 503 DGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLG 562

Query: 81  YGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
                 KL   P LVE  L   FV + A G +  AVL+ +  VYT+  G + RLGH    
Sbjct: 563 DVRADGKL---PGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVM 619

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           +   P  L+  L+   V  +A G  +  A+
Sbjct: 620 DRNTP-TLVEALKEKQVKSVACGSGFTAAI 648


>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
          Length = 507

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 102 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 160

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 161 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 218

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 219 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 274

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 275 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 334

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 335 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 394



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 124 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 181

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 182 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 237

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 238 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 297

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 298 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 348



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 149 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 207

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 208 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 260

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 320

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 321 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 372

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 373 QIYAGYTC-----SFAVSEVGGLFFWGA 395



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 122 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 166

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 167 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 211

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 212 GENKMGQLGL---GNQTD 226



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 400 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 459

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 460 AQEVKTLDGIFSEQVAMGYSHSLVIARD 487


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 152/336 (45%), Gaps = 42/336 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G+    L++  G V+ +G++  G   +G+     V+ PQLV++L  +     A G+F 
Sbjct: 295 ACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD--VSEPQLVQALAGVNAELVACGDFH 352

Query: 113 TAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG DA+    +GH    +   P  +   LE + +  IA G  +   
Sbjct: 353 TCAVTLSGELYT--WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTAL 410

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           ++   S   +++ G G  G LGHG + +   P+ +E   L  L+ V  A G WH A V +
Sbjct: 411 VS---SAGQLFTFGDGTFGVLGHGDKRNLAIPKEVES--LKGLKTVRAACGIWHTAAVVE 465

Query: 229 ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
                        G++ TWG G    LGHG++E + VP  V AL D     VA G   T 
Sbjct: 466 VIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTV 525

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++  G V++ G      LG N  ADG+         P +V       +  +  +    I
Sbjct: 526 ALTTSGRVFTMGSTIYGQLG-NPKADGK--------VPGMV-------DGELARTFVEEI 569

Query: 337 YWNAH-TFALTESGKLYAFGAGDKGQLGIELVNNQT 371
              AH   AL+   ++Y +G G  G+LG   V ++T
Sbjct: 570 GCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRT 605



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+RI   A GA  T L+S AGQ++ FG  +FG   +G +  + +  P+ VESLK +  
Sbjct: 393 LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK--RNLAIPKEVESLKGLKT 450

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P   +  L
Sbjct: 451 VRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPT-CVAAL 509

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A G+   +AL    SG  V+++G  + G+LG+  + D K P +++  +L   
Sbjct: 510 VDYNFRQVACGHSLTVALTT--SGR-VFTMGSTIYGQLGN-PKADGKVPGMVDG-ELART 564

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +  GA H A +     + TWG G  G LGHG+ E  + P +V+AL D +   VA G
Sbjct: 565 FVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACG 624

Query: 272 DYTTFVV 278
              T V+
Sbjct: 625 SSFTAVI 631



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 38/307 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLG 149
           P+ +++   + V   A G+   A+++++G V  F WG +   RLGH  + +  EP  L+ 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDV--FCWGEEYGGRLGHGIDVDVSEPQ-LVQ 336

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            L  +    +A G  +  A+      +  +      GG +GH +      P+ +    L 
Sbjct: 337 ALAGVNAELVACGDFHTCAVTLS-GELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLE 394

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            ++   +A GAWH A+V   G++ T+G G +G LGHG++   ++PK V++L  +K +  A
Sbjct: 395 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAA 454

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G G+   LGH       G++    L P  V
Sbjct: 455 CGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGH-------GDKEQK-LVPTCV 506

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
            +L   N R  Q++  +S+     T ALT SG+++  G+   GQLG    N + +   P 
Sbjct: 507 AALVDYNFR--QVACGHSL-----TVALTTSGRVFTMGSTIYGQLG----NPKADGKVPG 555

Query: 378 RVDIDLS 384
            VD +L+
Sbjct: 556 MVDGELA 562



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 11/173 (6%)

Query: 24  NGKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           +G +  LG   +E    P    +L      Q A G   T+ ++ +G+V+  G   +G+  
Sbjct: 486 DGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG 545

Query: 81  YGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
                 K+   P +V+  L   FV +   G    A LS +  +YT+  G + RLGH    
Sbjct: 546 NPKADGKV---PGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVE 602

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALAC--QPSGMAVYSVGCGLGGKLG 190
           +   P  L+  L +  V  +A G  +  A+ C  +P   A  SV  G     G
Sbjct: 603 DRTAPT-LVEALRDKQVKTVACGSSF-TAVICLHKPVSDADQSVCSGCKQAFG 653


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 145/348 (41%), Gaps = 30/348 (8%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            PL   +       Q AAG    + I   G VY++G++  G+   G    +    P     
Sbjct: 841  PLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTG 900

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-LGHHTEPNDVEPHPLLGTLENIP- 155
             +    VQ + G   +A +  E RVYT  WG+++   G     +    +P      + P 
Sbjct: 901  GQPFKAVQVSAGVADSAAIDSENRVYT--WGSESTGKGQTPAYSTTRKNPTPAADPDNPG 958

Query: 156  ----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 VQ++  + +++AL    +   VY+ G    G+LG+G+     +     +    + 
Sbjct: 959  QTLHAVQVSLNWSFVMALDADGN---VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSF 1015

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIH 267
            Q   ++AG+WHA  +  DG   TWG+  YG LG G+   +  P+ VQ   D    +KA  
Sbjct: 1016 QASQISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQ 1075

Query: 268  VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
            ++ G   + VV  DG ++++G   +  LG             N +      ++K    + 
Sbjct: 1076 ISAGVDHSLVVDRDGSLWAWGWNSNGQLG-----------IGNTVNQTKPATIKDPANKA 1124

Query: 328  VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
                   S     H+ A+ + G L+A+G    GQLG    NNQT   N
Sbjct: 1125 QTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQYGQLG----NNQTATRN 1168



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 62/376 (16%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--- 87
           G +V  TP   R   GIR  Q +AG G  + ++  G +Y++G +  G+   G    +   
Sbjct: 221 GTKVTLTPPGPR---GIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEP 277

Query: 88  -LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEP 144
             V  PQ V   ++   VQA+ G  F+  L  +G++Y  SWG++   +LG++T      P
Sbjct: 278 VPVKKPQGVS--QDFTWVQASAGYLFSVGLGSDGKLY--SWGDNTYGQLGNNTTTAHYTP 333

Query: 145 HPLLGTLENIPV----VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            P +   +N P      Q A G  + L L    S   +YS G     +LG G+ T+   P
Sbjct: 334 EP-VNLPQNAPSGFTWKQEAVGSLHALGLG---SDGNLYSWGDNDHNQLGDGTTTERHAP 389

Query: 201 RLIEQFQLLNLQPVVVAAG---------AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
             ++        P  V +G          WH+  +G D  +  WG    G +G G+    
Sbjct: 390 IQVK-------MPSGVPSGFAWKQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDN 442

Query: 252 SVPKVVQAL-----NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
            +  V  A      ++        GDY +  +  DG++Y++G G + ++G+ +  D  G 
Sbjct: 443 KITPVRIATPQGVPSNFTWGQFQMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGP 502

Query: 307 RHA---NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             A   N + P    S KQV+   V             + A+   G LY++GA + GQLG
Sbjct: 503 TQAHKPNGVLPNF--SWKQVSLLSVA------------SLAIGSDGNLYSWGANNNGQLG 548

Query: 364 IELVNNQTERGNPERV 379
               N  T+R  P RV
Sbjct: 549 D---NTTTQRNTPIRV 561



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 12/166 (7%)

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDY 273
            VAAG  H   +G +G V +WG   +G LG G       P+ V+       KA+ V+ G  
Sbjct: 855  VAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVA 914

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  +  +  VY++G   +      A +  + N      TP             VQ+SL 
Sbjct: 915  DSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNP-----TPAADPDNPGQTLHAVQVSLN 969

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             S        AL   G +Y +G    GQLG    ++ +   NP R+
Sbjct: 970  WSF-----VMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARL 1010


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 30/338 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G+  T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRK-- 74

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
             P+ V +L    +V  + G   T  L+ +G+V  FSWG+    ++G  T    +     
Sbjct: 75  --PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIGLSTAEEYIRVPRN 130

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQF 206
           + +L ++ +VQ+A G+ + LAL+       ++S G    G+LG G     E  PR I+  
Sbjct: 131 IKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKS- 186

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  +    +AAG  H+  +   G +  WG  ++G LG  +E   +VP ++++L   K I
Sbjct: 187 -LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           H+  G+  T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   
Sbjct: 246 HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSI 295

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
           V QI+         HT A    SG++Y+FG G  GQLG
Sbjct: 296 VTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G+  T  +  +G VYT   
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       E    +G L+   +V ++ G  + LAL        V+S G  + G
Sbjct: 61  NDLGQLGHDKSRRKPEQ---VGALDAQIIVAVSCGEAHTLALN---DKGQVFSWGHAVYG 114

Query: 188 KLGHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           ++G    T E++ R+    + L ++Q V VA G  H+  + +D  + +WG  +YG LG G
Sbjct: 115 QIGLS--TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + E  P+ +++L+ +   H+A G   +F ++  G ++ +G  +   LG     D   
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN- 231

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  +++++ I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 232 -------VPALLKSLR--SQKIIHICCGED-----HTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 STNHEV---NPRKV 288



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 6/149 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           + G+  L        P   +SL+  +II    G   T  ++  G V+ FG   +G  + G
Sbjct: 218 KFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYG--QLG 275

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPND 141
              T    +P+ V  L    V Q A G   T A +   GR+Y+F  G + +LG  +  N 
Sbjct: 276 HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINR 335

Query: 142 VEPHPLLG---TLENIPVVQIAAGYCYLL 167
             P  + G   T E+       A  CY L
Sbjct: 336 KSPFTVKGNWLTYEDYVRHLPEANGCYCL 364


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 38/358 (10%)

Query: 21  NERNGKRNLLG--REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           N R+G+  L G   E+   P      +   I Q A G   T++I+  G++Y+ G + +G+
Sbjct: 38  NTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQ 97

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
             +     +L    QL+  L      + A G + T  ++  G++  FSWG+++  +LG +
Sbjct: 98  LGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQL--FSWGSNSEGQLGLN 151

Query: 137 TEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
           ++ N +E  P ++ TL    +VQ+A G  + LAL    +   +YS G    G+LG G   
Sbjct: 152 SK-NFMECSPRMVKTLGTSIIVQVACGMKHALALT---NNGELYSWGSNSEGQLGLGVDI 207

Query: 196 -DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             E  P+LI    L  +    +A G +H+  + + G +  WG   +G LG  + +  ++P
Sbjct: 208 RSEVKPKLINT--LAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLP 265

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             +Q L + K  + A G+  +  ++ DG V++ G G    LGH     G  N   N + P
Sbjct: 266 HQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH-----GSNN---NEILP 317

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQT 371
           + V  L  +   V QIS         HT AL  S G++YA+G G  GQLG    NN T
Sbjct: 318 RQVMEL--MGSTVTQISCGKR-----HTLALVPSQGRVYAWGLGGAGQLG----NNST 364



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   ++L    I+Q A G    + +++ G++Y++G +S G+   GV   +    P+L+ 
Sbjct: 159 SPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVD-IRSEVKPKLIN 217

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           +L  + +   A G + +  +S+ G +  F WG +   +LG +   N   PH L  TL N 
Sbjct: 218 TLAGVPIAFIACGGYHSIAISKSGAI--FGWGKNTFGQLGLNDTQNRNLPHQL-QTLRNA 274

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            +   A G  + + L        V++ G G+ G+LGHGS  +E  PR +   +L+     
Sbjct: 275 KICYAACGEEFSVFLTVDG---GVFTCGAGMYGQLGHGSNNNEILPRQV--MELMGSTVT 329

Query: 215 VVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            ++ G  H  A+V   GRV  WG G  G LG+ +      P+VV 
Sbjct: 330 QISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVH 374


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 10/246 (4%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 115
           M ++  G+VY++G    G   +G   ++    P LV  L        VV    G+ ++A 
Sbjct: 252 MALTSEGEVYSWGNGDGGRLGHGDTNSR--EEPTLVRGLSGKQLGRHVVHIVCGSTYSAA 309

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           ++ +G ++T+  GN  RLGH +  + + P  L+ +L+   V+ I  G      LA    G
Sbjct: 310 ITADGELFTWGRGNYGRLGHGSSEDQLTP-TLVVSLKGRRVIDICCGSGDAQTLAVTDDG 368

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             V+S G G  GKLG G     K P++I++ Q  ++  V V  GA  +  + + G + TW
Sbjct: 369 -TVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDI--VRVCCGAQFSLALTKTGHIWTW 425

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G    LGHG EE    PK ++ L   K + VA G     V++E+G+VY +G  +   L
Sbjct: 426 GKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQL 485

Query: 296 GHNAIA 301
           G ++ +
Sbjct: 486 GDSSFS 491



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 29/331 (8%)

Query: 38  PLYCRSLQGIRIIQAAA--GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P    SL    +++ AA       M ++  G+VY++G    G   +G           LV
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---HPLLGTLE 152
                I       G  + A L+ EG VY++  G+  RLGH    +  EP     L G   
Sbjct: 240 -----IVYPYHPEGKHYMA-LTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL 293

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
              VV I  G  Y  A+        +++ G G  G+LGHGS  D+  P L+   +   + 
Sbjct: 294 GRHVVHIVCGSTYSAAITADGE---LFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVI 350

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            +   +G      V  DG V +WG G YG LG G  +    PK++  L     + V  G 
Sbjct: 351 DICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGA 410

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             +  +++ G ++++G G+S  LGH            ++  P+ +  L+   ++VV +++
Sbjct: 411 QFSLALTKTGHIWTWGKGDSQRLGHGT--------EEHIRFPKQLEGLR--GKKVVDVAV 460

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 + H   +TE G++Y +G  D+GQLG
Sbjct: 461 G-----SMHCLVMTEEGEVYGWGRNDQGQLG 486



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 8/169 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           TP    SL+G R+I    G+G  +T+ ++D G V+++G   +G  + G  G+    +P++
Sbjct: 337 TPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYG--KLGRGGSDGCKTPKI 394

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           ++ L+   +V+   G  F+  L++ G ++T+  G+  RLGH TE +   P  L G L   
Sbjct: 395 IDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEG-LRGK 453

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            VV +A G  + L +  +     VY  G    G+LG  S + +  P L+
Sbjct: 454 KVVDVAVGSMHCLVMTEEGE---VYGWGRNDQGQLGDSSFSTKSDPTLM 499



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESV 253
           ++ + P+L+E      +  V       H   +  +G V +WG G  G LGHG+   C   
Sbjct: 175 SESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKG 234

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
            KV   L  V   H     Y    ++ +G+VYS+G G+   LGH     G  N       
Sbjct: 235 QKV---LVIVYPYHPEGKHY--MALTSEGEVYSWGNGDGGRLGH-----GDTNSREE--- 281

Query: 314 PQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           P LV  L  KQ+   VV I     +  + ++ A+T  G+L+ +G G+ G+LG
Sbjct: 282 PTLVRGLSGKQLGRHVVHI-----VCGSTYSAAITADGELFTWGRGNYGRLG 328



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 8/133 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     LQG  I++   GA  ++ ++  G ++ +GK       +G +  + +  P+ +E
Sbjct: 391 TPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTE--EHIRFPKQLE 448

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   VV  A+G+    V++ EG VY +   +  +LG  +     +  P L  L+   +
Sbjct: 449 GLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSS--FSTKSDPTLMPLDGKSI 506

Query: 157 VQIAAG----YCY 165
             IA G    +C+
Sbjct: 507 SGIACGPAQSFCW 519


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 30/338 (8%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C       +     G+  T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRK-- 74

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
             P+ V +L    +V  + G   T  L+ +G+V  FSWG+    ++G  T    +     
Sbjct: 75  --PEQVGALDAQIIVAVSCGEAHTLALNDKGQV--FSWGHAVYGQIGLSTAEEYIRVPRN 130

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQF 206
           + +L ++ +VQ+A G+ + LAL+       ++S G    G+LG G     E  PR I+  
Sbjct: 131 IKSLSDVQIVQVACGHHHSLALS---KDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKS- 186

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  +    +AAG  H+  +   G +  WG  ++G LG  +E   +VP ++++L   K I
Sbjct: 187 -LSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           H+  G+  T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   
Sbjct: 246 HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSI 295

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
           V QI+         HT A    SG++Y+FG G  GQLG
Sbjct: 296 VTQIACGRQ-----HTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G+  T  +  +G VYT   
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH       E    +G L+   +V ++ G  + LAL  +     V+S G  + G
Sbjct: 61  NDLGQLGHDKSRRKPEQ---VGALDAQIIVAVSCGEAHTLALNDKGQ---VFSWGHAVYG 114

Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           ++G  +  +  + PR I+   L ++Q V VA G  H+  + +D  + +WG  +YG LG G
Sbjct: 115 QIGLSTAEEYIRVPRNIK--SLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            E + E  P+ +++L+ +   H+A G   +F ++  G ++ +G  +   LG     D   
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN- 231

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  +++++ I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 232 -------VPALLKSLR--SQKIIHICCGED-----HTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 STNHEV---NPRKV 288



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 6/149 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           + G+  L        P   +SL+  +II    G   T  ++  G V+ FG   +G  + G
Sbjct: 218 KFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYG--QLG 275

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPND 141
              T    +P+ V  L    V Q A G   T A +   GR+Y+F  G + +LG  +  N 
Sbjct: 276 HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINR 335

Query: 142 VEPHPLLG---TLENIPVVQIAAGYCYLL 167
             P  + G   T E+       A  CY L
Sbjct: 336 KSPFTVKGNWLTYEDYVRHLPEANGCYCL 364


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 43/343 (12%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +I  A G   ++ I+ +G+ ++FG + +G+  +G   TK + +P+ V++LK+   +  A 
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHG--HTKALVNPRCVKALKDKRAILVAC 101

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           G   T V + + +VY F   ++ +LG      +H +P       L+ TL  + V  + AG
Sbjct: 102 GRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQ------LVATLNGVQVKALTAG 155

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + LAL+ +     VY  G    G+LG G +   K P  ++       + + ++AGA+H
Sbjct: 156 ADHSLALSAKG---IVYLWGSSEHGQLGLGRKKQRKLPVQLKT----EGKAIAISAGAYH 208

Query: 223 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKV--VQALNDVKAIHVATGDYTTFVV 278
           +A V  DG + T+G   +G LG     ++C    KV  +Q L       VA G   T  +
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL----VTSVACGGSHTVAL 264

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           + DG  YSFG G    L       G G R  +   P L+     V  ++ ++S   S   
Sbjct: 265 TCDGRAYSFGDGSQGQL-------GLGQRVTHAGRPHLIQMPTGV--KMARVSAGQS--- 312

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
             HT  L+E  ++Y  G G  G+L +E     + + +P  VDI
Sbjct: 313 --HTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDI 353



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 36/304 (11%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I + G V+ FGK  F +    + GT  V         KN  V+  A G+  +  ++  GR
Sbjct: 15  IPELGAVFTFGKSKFSD---NLPGTFWV---------KNDAVISVACGDQHSVFITASGR 62

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
            ++F   +  +LGH      V P   +  L++   + +A G  + L          VY+ 
Sbjct: 63  TFSFGSNDYGQLGHGHTKALVNPR-CVKALKDKRAILVACGRSHTLVAT---DDKKVYAF 118

Query: 182 GCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
           G     +LG   S      P+L+    L  +Q   + AGA H+  +   G V  WG   +
Sbjct: 119 GINSEHQLGVKSSAAYHADPQLVAT--LNGVQVKALTAGADHSLALSAKGIVYLWGSSEH 176

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           G LG G ++   +P  VQ   + KAI ++ G Y +  V+ DG +Y+FG  E   LG N  
Sbjct: 177 GQLGLGRKKQRKLP--VQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTN-- 232

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                      L P+      +V +  +Q  +T+     +HT ALT  G+ Y+FG G +G
Sbjct: 233 -----------LAPKKCRKPSKVPD--IQGLVTSVACGGSHTVALTCDGRAYSFGDGSQG 279

Query: 361 QLGI 364
           QLG+
Sbjct: 280 QLGL 283



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 23/294 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVE 96
           P   ++L+  R I  A G   T++ +D  +VYAFG +S  E + GV+ +      PQLV 
Sbjct: 85  PRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINS--EHQLGVKSSAAYHADPQLVA 142

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L  + V     G   +  LS +G VY +      +LG   +     P  L    + I +
Sbjct: 143 TLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAI 202

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
              A    Y+       +   +Y+ G    GKLG    T+    +  +  ++ ++Q +V 
Sbjct: 203 SAGAYHSAYV------NTDGVLYTFGETEHGKLG----TNLAPKKCRKPSKVPDIQGLVT 252

Query: 216 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDY 273
            VA G  H   +  DGR  ++G G  G LG G     +  P ++Q    VK   V+ G  
Sbjct: 253 SVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQS 312

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT--SLKQVNE 325
            T  +SE   +Y+  CGE     H  +A   G   +N  +P LV   SL QV +
Sbjct: 313 HTAFLSEGRQMYT--CGEGR---HGKLALEDGEMGSNKFSPMLVDILSLFQVQQ 361


>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
          Length = 448

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 43  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 101

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 102 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 159

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 160 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 215

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 216 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 275

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 276 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 335



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 65  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 122

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 123 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 178

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 179 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 238

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 239 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 289



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 90  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 148

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 149 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 201

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 202 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 261

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 262 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 313

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 314 QIYAGYTC-----SFAVSEVGGLFFWGA 336



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 63  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 107

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 108 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 152

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 153 GENKMGQLGL---GNQTD 167



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 341 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 400

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 401 AQEVKTLDGIFSEQVAMGYSHSLVIARD 428


>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
          Length = 488

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 83  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 141

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 142 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 199

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 200 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 255

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 256 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 315

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 316 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 375



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 105 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 162

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 163 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 218

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 219 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 278

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 279 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 329



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 130 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 188

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 189 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 241

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 242 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 301

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 302 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 353

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 354 QIYAGYTC-----SFAVSEVGGLFFWGA 376



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 103 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 147

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 148 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 192

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 193 GENKMGQLGL---GNQTD 207



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 381 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 440

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 441 AQEVKTLDGIFSEQVAMGYSHSLVIARD 468


>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
          Length = 427

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 40.8 bits (94), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKLKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGIFSEQVAMGYSHSLVIARD 407


>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
 gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
 gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
 gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
          Length = 520

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 115 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 173

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E+L +  +V AA G   T  L+  G V+ F      +
Sbjct: 174 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 232 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 287

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 288 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 347

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+AA G  H   +   G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 385

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+ +L   +E +V  +   +     HT ALT++G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 224

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 413 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 472

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 473 AQEVKTLDGIFSEQVAMGYSHSLVIARD 500


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +    +G+  ++ I D G ++ +G +  G   +  + TK    P  V++L N+ 
Sbjct: 34  ALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPE-TKTENIPSRVKALANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP-NDVEPHPLLGTL-------ENI 154
           + QAAIG +    +  +GR Y  +WG +       EP  D    P+   +         +
Sbjct: 93  ITQAAIGGWHCLAVDDQGRAY--AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLL 209
            V Q+AAG  + + L                  + GH     +  P     ++    ++ 
Sbjct: 151 TVRQVAAGGTHSVVLT-----------------REGHVWTWGQPWPPGDIKQIFVPVRVQ 193

Query: 210 NLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            L+ V ++A GA+H   + +DGR+  WG   YG LG G+ +  S P  V  L+D+  + +
Sbjct: 194 GLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDI 253

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G + +  +++ G+VY +G GE   LG         N  ++ + PQ V  L +  E ++
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGFGD------NDKSSKMVPQKVNLLAE--EDII 305

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           Q+S   +     H+ ALT  G++++FG GD G+LG
Sbjct: 306 QVSCGGT-----HSVALTRDGRIFSFGRGDHGRLG 335



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 31/273 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVT 90
           P   ++L  ++I QAA G    + + D G+ YA+G + +G+        E G    + + 
Sbjct: 82  PSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIV 141

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHP 146
            P+       + V Q A G   + VL+REG V+T+        G    P D++    P  
Sbjct: 142 IPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTW--------GQPWPPGDIKQIFVPVR 191

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           + G LEN+ ++ + A       LA +  G  + + G    G+LG G      HP  +   
Sbjct: 192 VQG-LENVSIIAVGA----FHNLALEEDGR-LLAWGNNEYGQLGTGDTQPTSHPVPVHGL 245

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVK 264
             L L  V +AAG WH+  +   G V  WG G +G LG G+ +  S  VP+ V  L +  
Sbjct: 246 DDLTL--VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEED 303

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            I V+ G   +  ++ DG ++SFG G+   LG+
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 41/229 (17%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S  ++ + G G  G+LG G+  +++   ++E  +  +++ VV  +G+ ++  +  DG + 
Sbjct: 3   SATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVV--SGSRNSLAICDDGTMF 60

Query: 234 TWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           TWGW + G LGH  E + E++P  V+AL +VK    A G +    V + G  Y++G  E 
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 293 ASLGHNAIAD-------------------------GQGNRHANVLT----------PQLV 317
              G   + D                           G  H+ VLT          P   
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP 180

Query: 318 TSLKQ--VNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
             +KQ  V  RV  +   + I   A H  AL E G+L A+G  + GQLG
Sbjct: 181 GDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 23/234 (9%)

Query: 27  RNLLGREVNGT---PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           ++ +GR V      P  C     +R  Q AAG   +++++  G V+ +G+       +  
Sbjct: 129 KDEMGRPVRRDIVIPKRCAPKLTVR--QVAAGGTHSVVLTREGHVWTWGQ------PWPP 180

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND 141
              K +  P  V+ L+N+ ++  A+G F    L  +GR+   +WGN+   +LG       
Sbjct: 181 GDIKQIFVPVRVQGLENVSII--AVGAFHNLALEEDGRL--LAWGNNEYGQLGTGDTQPT 236

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P P+ G L+++ +V IAAG  +  AL  +     VY  G G  G+LG G   D+    
Sbjct: 237 SHPVPVHG-LDDLTLVDIAAGGWHSTALTDKGE---VYGWGRGEHGRLGFGD-NDKSSKM 291

Query: 202 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           + ++  LL  + ++ V+ G  H+  + +DGR+ ++G G +G LG+G +     P
Sbjct: 292 VPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 16/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +  WG G  G LG G  E +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH         +  N+  P  V +L  V        +T +     H  A+ + G+ 
Sbjct: 67  RGTLGHPP-----ETKTENI--PSRVKALANVK-------ITQAAIGGWHCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E + +  E G P R DI
Sbjct: 113 YAWGGNEYGQCGEEPLKD--EMGRPVRRDI 140


>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
          Length = 427

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGIFSEQVAMGYSHSLVIARD 407


>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
          Length = 458

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 53  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 111

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V  P+L+E L +  +V AA G   T +L   G V+ F      +
Sbjct: 112 RNEKGQLGHG--DTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLPETGSVFAFGENKMGQ 169

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 170 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 225

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 226 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 285

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 286 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 345



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 75  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEXPRLL 132

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H  ++ + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 133 EG---LSHEVIVSAACGRNHTLLLPETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 188

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 189 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 248

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 249 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 299



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   LL  L +  +V  A G  + L L   P 
Sbjct: 100 LITTEGKLWSWGRNEKGQLGH-GDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLL---PE 155

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
             +V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 156 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 211

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 212 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 271

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 272 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 323

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 324 QIYAGYTC-----SFAVSEVGGLFFWGA 346



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 73  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 117

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT  L E+G ++AF
Sbjct: 118 LGH-----GDTKR---VEXPRLLEGLS--HEVIVSAACGRN-----HTLLLPETGSVFAF 162

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 163 GENKMGQLGL---GNQTD 177



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 351 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 410

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 411 AQEVKTLDGIFTEQVAMGYSHSLVIARD 438


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 147/330 (44%), Gaps = 36/330 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVESL    +   
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVESLAACNIDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE +   QIA   C
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL---QIAYVSC 191

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
                A   S   +++ G G  G LGHG       PR +E   L  L+ + VA G WH A
Sbjct: 192 GTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVES--LSGLKTIAVACGVWHTA 249

Query: 225 -----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                +V Q       G++ TWG G    LGHG++E    P  V +L D     VA G  
Sbjct: 250 AIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHS 309

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G V++ G      LG N  +DG+         P LV   K  +E V+QI+  
Sbjct: 310 LTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIASEHVLQIACG 358

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H   LT   +++ +G G  G+LG
Sbjct: 359 -----SYHVAVLTSRSEVFTWGKGANGRLG 383



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 20/239 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKT 238

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L 
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLI 297

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   V+++G  + G+LG+     +  P L+E  ++ +  
Sbjct: 298 DYDFYRVACGHSLTVGLT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEH 351

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + +A G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 VLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    ++++R G V+T  WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFT--WGEDSGGRLGHGTREDSVHPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    +  +A G  +  A+    +   +Y+ G G    G LGHG+      PR I    
Sbjct: 125 SLAACNIDFVACGEFHTCAVT---TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISG-P 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-------GDKEAR-LKPTC 292

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  ++    +++  +S+     T  LT SGK++  G    GQLG
Sbjct: 293 VASL--IDYDFYRVACGHSL-----TVGLTTSGKVWTMGNSVYGQLG 332


>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
 gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
 gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
 gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
 gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
          Length = 523

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 118 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 176

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 177 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 234

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 235 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 290

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 291 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 350

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 351 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 410



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 140 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 197

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 198 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 253

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 254 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 313

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 314 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 364



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 165 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 223

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 224 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 276

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 277 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 336

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 337 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 388

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 389 QIYAGYTC-----SFAVSEVGGLFFWGA 411



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 138 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 182

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 183 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 227

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 228 GENKMGQLGL---GNQTD 242



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 416 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 475

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 476 AQEVKTLDGIFSEQVAMGYSHSLVIARD 503


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  103 bits (258), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 97/354 (27%), Positives = 160/354 (45%), Gaps = 37/354 (10%)

Query: 31  GREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           GRE +  TP    +     I   + G+  +  +++ G VY +G+ S         G   +
Sbjct: 607 GREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSL 666

Query: 90  TS---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
                P  VESL  + +V  +IG + +A L   G + T+  G D +LGH    N   P  
Sbjct: 667 EDQLLPTKVESLSEVVLV--SIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPK- 723

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           ++ T+ +  V Q+  G  + +   C      V++ G    G+LG G       P L+   
Sbjct: 724 VVQTMTSHWVTQVQCGEKHTI---CLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL 780

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           +  N+  + +A G+ H AV+     V  +G G       G+    SVP +V AL  +   
Sbjct: 781 EKYNI--IQIACGSTHCAVLTNAREVLVFGNGA----AMGSANIISVPMMVPALKHLNIE 834

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            ++ G Y+T  ++E GDVY++G G+   LGH          + + L P+LV  L+  ++ 
Sbjct: 835 RLSCGHYSTAALTECGDVYTWGSGQ--ELGHGT--------NQSELHPKLVDGLR--SQS 882

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           + QIS         H   LT+SGK+Y  G    GQLG    + Q ++  P+++D
Sbjct: 883 IRQISCGGR-----HMAFLTDSGKIYTCGKDPFGQLG----HAQGDQNKPKKID 927



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 31/241 (12%)

Query: 126 SWGNDA--RLGHHTEPND-VEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSV 181
           +WG+ +  +LG  TE  +  +  P      NIP +  I+ G  Y  AL        VY  
Sbjct: 592 TWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALT---ENGDVYMW 648

Query: 182 GCGLG-----GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           G G         LG+GS  D+  P  +E       + V+V+ G +H+A +  +G + TWG
Sbjct: 649 GRGSVKNPPLSTLGNGSLEDQLLPTKVESLS----EVVLVSIGYYHSAALKSNGELLTWG 704

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            G  G LGHG+   +++PKVVQ +       V  G+  T  ++++G V+++G  E   LG
Sbjct: 705 CGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLG 764

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
              + D Q N      TP LVTSL++ N  ++QI+  ++     H   LT + ++  FG 
Sbjct: 765 ---LGDTQKN-----CTPMLVTSLEKYN--IIQIACGST-----HCAVLTNAREVLVFGN 809

Query: 357 G 357
           G
Sbjct: 810 G 810



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 17/201 (8%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   + N TP+   SL+   IIQ A G+    ++++A +V  FG  +       + 
Sbjct: 761 GQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGA------AMG 814

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
              +++ P +V +LK++ + + + G++ TA L+  G VYT  WG+   LGH T  N  E 
Sbjct: 815 SANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYT--WGSGQELGHGT--NQSEL 870

Query: 145 HP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           HP L+  L +  + QI+ G  ++  L    SG  +Y+ G    G+LGH ++ D+  P+ I
Sbjct: 871 HPKLVDGLRSQSIRQISCGGRHMAFLT--DSG-KIYTCGKDPFGQLGH-AQGDQNKPKKI 926

Query: 204 EQFQLLNLQPVVVAAGAWHAA 224
           +   LL    + V+ G  H A
Sbjct: 927 D--SLLKTTFISVSCGENHNA 945


>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
          Length = 426

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 48  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 106

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V  F      +
Sbjct: 107 RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQ 164

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 165 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 220

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 221 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 280

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 281 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 340



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 70  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 127

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 128 EG---LSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQT-DAVPSPAQIMYN 183

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 184 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 243

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 244 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 294



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 95  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 153

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V + G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 154 ---VLAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 206

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 207 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 266

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 267 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 318

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 319 QIYAGYTC-----SFAVSEVGGLFFWGA 341



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 68  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 112

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G + AF
Sbjct: 113 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVLAF 157

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 158 GENKMGQLGL---GNQTD 172


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 148/324 (45%), Gaps = 35/324 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++  G+++ +G++S G   +GV   + V  P+LVESL    V   A G F 
Sbjct: 286 ACGVRHAALVTRQGEIFTWGEESGGRLGHGV--GRDVIQPRLVESLAFTSVDFVACGEFH 343

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           T  ++  G ++T+  G  N   LGH T+ +   P  + G LE +   Q+A+  C     A
Sbjct: 344 TCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL---QVASVTCGPWHTA 400

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-- 228
              +   +++ G G  G LGHG + +  +PR +E   L  L+ + VA G WH A V +  
Sbjct: 401 LVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVES--LSGLRTIAVACGVWHTAAVVEVI 458

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG++E    P  V AL +     VA G   T  ++
Sbjct: 459 VTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLT 518

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G V + G      LG N  +DG+         P  V   K + E V +I+     Y  
Sbjct: 519 TSGQVCTMGSTVYGQLG-NPQSDGK--------LPCFVED-KLLGECVEEIAC--GAY-- 564

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT   ++Y +G G  G+LG
Sbjct: 565 -HVAVLTSRNEVYTWGKGANGRLG 587



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T L++   Q++ FG  +FG   +G +    V  P+ VESL  +  
Sbjct: 384 LEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDN--VAYPREVESLSGLRT 441

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P  +   +E
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIE 501

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
                ++A G+   + L    SG  V ++G  + G+LG+  ++D K P  +E  +LL   
Sbjct: 502 -YNFQKVACGHSLTVGLTT--SGQ-VCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGEC 555

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 271
              +A GA+H AV+     V TWG G  G LGHG+ E    P +V+ L D    ++A G 
Sbjct: 556 VEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGS 615

Query: 272 DYTTFV 277
           +YT  +
Sbjct: 616 NYTAAI 621



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 29/283 (10%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++R+G ++T+   +  RLGH    + ++P  L+ +L
Sbjct: 271 PKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR-LVESL 329

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               V  +A G  +  A+      +  +  G    G LGHG+      P+ I    L  L
Sbjct: 330 AFTSVDFVACGEFHTCAVT-MAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGL 387

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           Q   V  G WH A+V    ++ T+G G +G LGHG+++  + P+ V++L+ ++ I VA G
Sbjct: 388 QVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACG 447

Query: 272 DYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            + T  V E            G ++++G G+   LGH       G++    L P  V +L
Sbjct: 448 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGH-------GDKEPR-LKPTCVPAL 499

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            + N + V          ++ T  LT SG++   G+   GQLG
Sbjct: 500 IEYNFQKVACG-------HSLTVGLTTSGQVCTMGSTVYGQLG 535


>gi|301777289|ref|XP_002924055.1| PREDICTED: protein RCC2-like [Ailuropoda melanoleuca]
          Length = 447

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 42  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 100

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V  F      +
Sbjct: 101 RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQ 158

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 159 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 214

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 215 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 274

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 275 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 334



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 64  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 121

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 122 EG---LSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQT-DAVPSPAQIMYN 177

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 178 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 237

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 238 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 288



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 89  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 147

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V + G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 148 ---VLAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 200

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 201 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 260

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 261 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 312

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 313 QIYAGYTC-----SFAVSEVGGLFFWGA 335



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 62  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 106

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G + AF
Sbjct: 107 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVLAF 151

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 152 GENKMGQLGL---GNQTD 166



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 340 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 399

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 400 AQEVKTLDGIFTEQVAMGYAHSLVIARD 427


>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
          Length = 460

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 55  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 113

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V  F      +
Sbjct: 114 RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQ 171

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 172 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 227

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 228 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 287

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 288 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 347



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 77  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 134

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 135 EG---LSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQT-DAVPSPAQIMYN 190

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 191 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 250

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 251 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 301



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 102 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 160

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V + G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 161 ---VLAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 213

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 214 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 273

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 274 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 325

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 326 QIYAGYTC-----SFAVSEVGGLFFWGA 348



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 75  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 119

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G + AF
Sbjct: 120 LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVLAF 164

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 165 GENKMGQLGL---GNQTD 179



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 353 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 412

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 413 AQEVKTLDGIFTEQVAMGYAHSLVIARD 440


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 147/330 (44%), Gaps = 36/330 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVESL    +   
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVESLAACNIDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE +   QIA   C
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL---QIAYVSC 191

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
                A   S   +++ G G  G LGHG       PR +E   L  L+ + VA G WH A
Sbjct: 192 GTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVES--LSGLKTIAVACGVWHTA 249

Query: 225 -----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                +V Q       G++ TWG G    LGHG++E    P  V +L D     VA G  
Sbjct: 250 AIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHS 309

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G V++ G      LG N  +DG+         P LV   K  +E V+QI+  
Sbjct: 310 LTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIASEHVLQIACG 358

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H   LT   +++ +G G  G+LG
Sbjct: 359 -----SYHVAVLTSRSEVFTWGKGANGRLG 383



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 20/239 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKT 238

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L 
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLI 297

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   V+++G  + G+LG+     +  P L+E  ++ +  
Sbjct: 298 DYDFYRVACGHSLTVGLT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEH 351

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + +A G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 VLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    ++++R G V+T  WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFT--WGEDSGGRLGHGTREDSVHPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    +  +A G  +  A+    +   +Y+ G G    G LGHG+      PR I    
Sbjct: 125 SLAACNIDFVACGEFHTCAVT---TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISG-P 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-------GDKEAR-LKPTC 292

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  ++    +++  +S+     T  LT SGK++  G    GQLG
Sbjct: 293 VASL--IDYDFYRVACGHSL-----TVGLTTSGKVWTMGNSVYGQLG 332


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 156/360 (43%), Gaps = 42/360 (11%)

Query: 17  PDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 76
           PD +    GK + L       P    S   + +     G     L++  G+V+ +G++S 
Sbjct: 53  PDTVIRSTGKADFL------LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESG 106

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLG 134
           G   +G +   +   P+LVESL    V   A G F T  ++  G +YT+  G  N   LG
Sbjct: 107 GRLGHGSREDSV--HPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLG 164

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           + T+ +   P  + G LE   V  ++ G  +    A   S   +++ G G  G LGHG+R
Sbjct: 165 NGTDVSHWIPKRISGALEGHQVAYVSCGTWHT---ALVTSRGQLFTFGDGTFGVLGHGNR 221

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCL 243
                PR +E   L  L+ + VA G WH A V +            G++ TWG G    L
Sbjct: 222 ESFSCPREVES--LSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRL 279

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GHG++E    P  V +L D     +A G   T  ++  G + S G         N +   
Sbjct: 280 GHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQILSMG---------NTVYGQ 330

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            GN  ++   P LV  +  + E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 331 LGNPRSDGKLPCLVEDI--MGEHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 20/249 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G ++   + G   T L++  GQ++ FG  +FG   +G + +   + P+ VESL  + 
Sbjct: 180 ALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLK 237

Query: 103 VVQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L
Sbjct: 238 TIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+   + L    SG  + S+G  + G+LG+  R+D K P L+E   ++  
Sbjct: 297 IDYDFCRIACGHSLTVGLTT--SGQ-ILSMGNTVYGQLGN-PRSDGKLPCLVED--IMGE 350

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V VA G++H AV+     V TWG G  G LGHG+ E   +P +V+AL D    H+A G
Sbjct: 351 HVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACG 410

Query: 272 DYTTFVVSE 280
              T  + +
Sbjct: 411 SNFTSAICQ 419


>gi|281346734|gb|EFB22318.1| hypothetical protein PANDA_013306 [Ailuropoda melanoleuca]
          Length = 427

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V  F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 44  PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V + G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VLAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G + AF
Sbjct: 87  LGH-----GDTKR---VEAPKLIEGLS--HEVIVSAACGRN-----HTLALTETGSVLAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGIFTEQVAMGYAHSLVIARD 407


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 26/280 (9%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGND--ARLGHHTEPNDVEP 144
           ++  P L++  + + V   A G+    AVL  +  V   SWG +   +LG   + N   P
Sbjct: 127 IIKLPTLIK--QGLIVSMIACGDSHALAVLPNDATV--LSWGCNRWGQLGLGDQVNRCHP 182

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            P+ G  ++IPV  +AAG  +   L+       ++S GCG  G+LGHG+     +PR I 
Sbjct: 183 TPISGLSQSIPVF-VAAGSQHSFVLS---KFGELFSFGCGTFGRLGHGNELPSFNPRPIS 238

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L+    V VAAG  H+A V   G + TWGW RYG LG G  +  ++P   + L    
Sbjct: 239 T--LVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFN 296

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
            + V  G   T V+  +G VYSFG      LG  +  D       ++   ++   LKQ N
Sbjct: 297 IVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTD-------SIKPNRIDLDLKQ-N 348

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           + ++ I+   + Y+  H   LT+ G +Y+FG    G LG+
Sbjct: 349 DEIIDIA---AGYY--HVLLLTKKGCVYSFGYISDGALGL 383



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 67/327 (20%)

Query: 30  LGREVN---GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
           LG +VN    TP+   S Q I +   AAG+  + ++S  G++++FG  +FG   +G +  
Sbjct: 173 LGDQVNRCHPTPISGLS-QSIPVF-VAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELP 230

Query: 87  KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPND 141
               +P+ + +L    +V  A G   +A +  +G +YT+ W    +LG      HT PN 
Sbjct: 231 SF--NPRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK 288

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            +       LE   +V++  G  + L L        VYS G  + G+LG GS TD   P 
Sbjct: 289 NK------ELERFNIVKVVCGKNHTLVLDVNGH---VYSFGFNVCGQLGIGSYTDSIKPN 339

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------------- 246
            I+     N + + +AAG +H  ++ + G V ++G+   G LG G               
Sbjct: 340 RIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFS 399

Query: 247 -----------------------------NEECESVPKVVQALNDVK--AIHVATGDYTT 275
                                        N   +  PKVV+  N++   A+ +A G + +
Sbjct: 400 HFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHS 459

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIAD 302
            +++  G +Y+FG G++  LG+N   D
Sbjct: 460 AIITSSGRLYTFGLGDNFRLGNNCQED 486



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 54/359 (15%)

Query: 45  QGIRIIQAAAGAGRTM-LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           QG+ +   A G    + ++ +   V ++G + +G+   G Q  +   +P  +  L     
Sbjct: 136 QGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTP--ISGLSQSIP 193

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           V  A G+  + VLS+ G +++F  G   RLGH  E     P P+  TL    +V +AAG 
Sbjct: 194 VFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPI-STLVGKHIVSVAAGL 252

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +  A+  Q    A+Y+ G    G+LG G+      P   ++ +  N+  V V  G  H 
Sbjct: 253 MHSAAVDSQG---ALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNI--VKVVCGKNHT 307

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ---ALNDVKAIHVATGDYTTFVVSE 280
            V+  +G V ++G+   G LG G+      P  +      ND + I +A G Y   ++++
Sbjct: 308 LVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND-EIIDIAAGYYHVLLLTK 366

Query: 281 DGDVYSFGCGESASLG------------------------------------HNAIADGQ 304
            G VYSFG     +LG                                    +N+ ++  
Sbjct: 367 KGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSEND 426

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            N +   L P++V    ++ +  V+I+      W  H+  +T SG+LY FG GD  +LG
Sbjct: 427 INNNNAKLPPKVVELHNEIGDVAVKIAAGG---W--HSAIITSSGRLYTFGLGDNFRLG 480



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 50/266 (18%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L G  I+  AAG   +  +   G +Y +G + +G+   G+   K  T P   + 
Sbjct: 234 PRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQ--LGLGTVKKHTLPNKNKE 291

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPV 156
           L+   +V+   G   T VL   G VY+F +    +LG  +  + ++P+ + L   +N  +
Sbjct: 292 LERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEI 351

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVG------CGLGGKLGHGSR---------------- 194
           + IAAGY ++L L  +     VYS G       GLG  +GH SR                
Sbjct: 352 IDIAAGYYHVLLLTKKG---CVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDS 408

Query: 195 ------------TDEKH----------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
                       +D ++          P+++E    +    V +AAG WH+A++   GR+
Sbjct: 409 IDSYKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRL 468

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQ 258
            T+G G    LG+  +E + +P +V 
Sbjct: 469 YTFGLGDNFRLGNNCQEDQDMPCIVN 494


>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
 gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
 gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
           AltName: Full=Telophase disk protein of 60 kDa
 gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
 gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
 gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
 gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
 gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
          Length = 522

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 117 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 175

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 176 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 234 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 289

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 290 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 349

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 350 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 226

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 415 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 474

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 475 AQEVKTLDGIFSEQVAMGYSHSLVIARD 502


>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
          Length = 564

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 159 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 217

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 218 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 275

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 276 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 331

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 332 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 391

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 392 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 451



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 181 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 238

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 239 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 294

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 295 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 354

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 355 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 405



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 206 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 264

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 265 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 317

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 318 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 377

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 378 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 429

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 430 QIYAGYTC-----SFAVSEVGGLFFWGA 452



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 179 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 223

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 224 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 268

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 269 GENKMGQLGL---GNQTD 283



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 457 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 516

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 517 AQEVKTLDGIFSEQVAMGYSHSLVIARD 544


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 30/326 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           Q A G   T+ ++  GQVYA G +   +      G +L T  P  +  L+   V+Q A G
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQL-----GHELPTKRPLPIPELQAYVVIQIACG 94

Query: 110 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  L+  G++   SWG++   ++GH T+ + +E   +L  L +  VVQIA G  + L
Sbjct: 95  SRHSMALTEWGQI--LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           AL    S   +YS G  + G+LG  S  D  H    +    +L +    +A G  H+ ++
Sbjct: 153 ALT---SCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLI 209

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +   V  WG    G LG  +E+  + P  ++++  +    V  GD  +  ++ +G V++
Sbjct: 210 SKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFT 269

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            G G    LGH A          N + P++V  L  +   + Q++  N      HT AL 
Sbjct: 270 CGAGNYGQLGHGA--------SNNEMIPRMVIEL--MGSTITQVACGNR-----HTLALV 314

Query: 347 ES-GKLYAFGAGDKGQLGIELVNNQT 371
            S G++Y+FG G  GQLG     +QT
Sbjct: 315 PSGGRVYSFGLGASGQLGTRNTISQT 340



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 22/283 (7%)

Query: 24  NGKRNLLGREV-NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           N   + LG E+    PL    LQ   +IQ A G+  +M +++ GQ+ ++G +  G+  + 
Sbjct: 62  NNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHS 121

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN 140
                ++  P+++  L +  VVQ A GN  +  L+  G +Y  SWG++   +LG  + P 
Sbjct: 122 TDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVQS-PK 177

Query: 141 DVEPH---PL-LGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           D+ PH   PL L T+  IP+  IA G  + +L++        AV+  G    G+LG    
Sbjct: 178 DL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-----KSSAVFGWGKNTCGQLGLNDE 231

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +  +P  ++  + L ++   V  G  ++  +  +G V T G G YG LGHG    E +P
Sbjct: 232 QNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP 289

Query: 255 KVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 296
           ++V  L       VA G+ +T  +V   G VYSFG G S  LG
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 5/169 (2%)

Query: 35  NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           +  PL   ++ GI +   A G   + LIS +  V+ +GK++ G  + G+   +    P  
Sbjct: 182 SNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCG--QLGLNDEQNRAYPSQ 239

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           ++S++ + V     G+ ++  L+ EG V+T   GN  +LGH    N++ P  ++  L   
Sbjct: 240 LKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVI-ELMGS 298

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            + Q+A G  + LAL   PSG  VYS G G  G+LG  +   +  P+++
Sbjct: 299 TITQVACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 234
           MA+Y  G    G+LG G   +E+   L  Q +     PV  +A G  H   +  +G+V  
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            G   +  LGH  E     P  +  L     I +A G   +  ++E G + S+G  +   
Sbjct: 60  CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           +GH+   D        +  P+++  L  V+  VVQI+  N+     H+ ALT  G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163

Query: 355 GAGDKGQLGIELVNNQTERGNPERV 379
           G+   GQLG++   +      P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   +    P   +S++ + +     G   ++ +++ G V+  G  ++G+  +G  
Sbjct: 224 GQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGAS 283

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             +++  P++V  L    + Q A GN  T A++   GRVY+F  G   +LG     +   
Sbjct: 284 NNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTL 341

Query: 144 PHPLLG 149
           P  ++G
Sbjct: 342 PKVVIG 347


>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
           cuniculus]
          Length = 560

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 155 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 213

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 214 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 271

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + +   C+ +   +YS GC   G+LGH 
Sbjct: 272 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMITDCKGN---LYSFGCPEYGQLGHN 327

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 328 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 387

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 388 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 447



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 177 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 234

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 235 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 290

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + +    G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 291 GQPITKMACGAEFSMITDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 350

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 351 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 401



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 202 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 260

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + +    G +
Sbjct: 261 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMITDCKGNL 313

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 314 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 373

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 374 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 425

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 426 QIYAGYTC-----SFAVSEVGGLFFWGA 448



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 175 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 219

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 220 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 264

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 265 GENKMGQLGL---GNQTD 279



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 453 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 512

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 513 AQEVKTLDGIFSEQVAMGYSHSLVIARD 540


>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
          Length = 457

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 52  IGRKEVPRQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 110

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 111 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 168

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 169 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 224

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 225 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 284

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 285 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASRIYAGYTCSFAVSEVGGLFFWG 344



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 74  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 131

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 132 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 187

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 188 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 247

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 248 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 298



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 99  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 157

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 158 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 210

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 211 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 270

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 271 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 322

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           +I    +      +FA++E G L+ +GA
Sbjct: 323 RIYAGYTC-----SFAVSEVGGLFFWGA 345



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 72  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 116

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 117 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 161

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 162 GENKMGQLGL---GNQTD 176



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 350 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 409

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 410 AQEVKTLDGIFSEQVAMGYSHSLVIARD 437


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ +   G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G     +  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E     P ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 -NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYF----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 30/334 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++     G   T+ +   G VY  G +  G+  +     K    P+ V +L    +V  +
Sbjct: 35  KVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T  L+ +G+VY +   +D +LG       +     + +L +I +VQ+A GY + L
Sbjct: 91  CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           AL+       V+  G    G+LG G     +  P+LI+   LL +  + VAAG  H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKS--LLGIPFMQVAAGGAHSFVL 205

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +  WG  ++G LG  +E     P ++++L   K +++  G+  T  ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFT 265

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    LGHN+ +     R    L   +VT          QI+         HT A  
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310

Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 17/260 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G DS G+   G+ G+ + +  P+ ++SL +I
Sbjct: 80  ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDI 137

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L  IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQV 195

Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           AAG  + ++L L    SG A++  G    G+LG     D   P L++  +   +  V + 
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKI--VYIC 248

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
            G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G  +T+ 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308

Query: 277 VVSEDGDVYSFGCGESASLG 296
            V   G +YSFG G +  LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    ++V  P+  +   N  V     G   T  +  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++  L+   +V ++ G  + LAL  +     VY+ G    G
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114

Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  GS    + PR I+   L ++Q V VA G +H+  + +   V  WG  +YG LG G
Sbjct: 115 QLGLLGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 247 -NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            + + ++ P+++++L  +  + VA G   +FV++  G ++ +G  +   LG N     + 
Sbjct: 173 IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+     P L+ SL+   +++V I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 229 DRYF----PNLLKSLR--TQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275

Query: 366 LVNNQTERGNPERV 379
             N+ +   NP +V
Sbjct: 276 -HNSTSHEINPRKV 288



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 22  ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           + +G+  LLG  E    P   +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+  
Sbjct: 111 DSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G+   K   SPQL++SL  I  +Q A G   + VL+  G +  F WG +   +LG + E
Sbjct: 171 LGIDYKK-QASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +   P+ LL +L    +V I  G  +  AL  +     V++ G G  G+LGH S + E 
Sbjct: 228 NDRYFPN-LLKSLRTQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +PR +  F+L+      +A G  H +A V   GR+ ++G G  G LG G+      P  V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341

Query: 258 Q 258
           +
Sbjct: 342 K 342


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 147/330 (44%), Gaps = 36/330 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVESL    +   
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVESLAACNIDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH T+     P  + G LE +   QIA   C
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL---QIAYVSC 191

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
                A   S   +++ G G  G LGHG       PR +E   L  L+ + VA G WH A
Sbjct: 192 GTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVES--LSGLKTIAVACGVWHTA 249

Query: 225 -----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
                +V Q       G++ TWG G    LGHG++E    P  V +L D     VA G  
Sbjct: 250 AIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHS 309

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G V++ G      LG N  +DG+         P LV   K  +E V+QI+  
Sbjct: 310 LTVGLTTSGKVWTMGNSVYGQLG-NLNSDGR---------PCLVED-KIASEHVLQIACG 358

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H   LT   +++ +G G  G+LG
Sbjct: 359 -----SYHVAVLTSRSEVFTWGKGANGRLG 383



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 20/239 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--DLKSISCPREVESLSGLKT 238

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L 
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLI 297

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   V+++G  + G+LG+     +  P L+E  ++ +  
Sbjct: 298 DYDFYRVACGHSLTVGLT---TSGKVWTMGNSVYGQLGN--LNSDGRPCLVED-KIASEH 351

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + +A G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 VLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACG 410



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    ++++R G V  F+WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEV--FTWGEDSGGRLGHGTREDSVHPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    +  +A G  +  A+    +   +Y+ G G    G LGHG+      PR I    
Sbjct: 125 SLAACNIDFVACGEFHTCAVT---TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISG-P 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHG+ +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-------GDKEAR-LKPTC 292

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  ++    +++  +S+     T  LT SGK++  G    GQLG
Sbjct: 293 VASL--IDYDFYRVACGHSL-----TVGLTTSGKVWTMGNSVYGQLG 332


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 156/340 (45%), Gaps = 30/340 (8%)

Query: 11  LSPILRPDIINERNGKRNLLG---REVNGTPLYCRSLQGIRI---IQAAAGAGRTMLISD 64
           L P L P   N   G    LG         P   R     +I   + +    G T+ I+ 
Sbjct: 427 LIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIAS 486

Query: 65  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVY 123
            G++Y++G   +G+  +G   T+   SP+L+   ++   V Q A+G   +A ++ EG +Y
Sbjct: 487 DGRIYSWGDGDYGKLGHGNHVTQ--KSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLY 544

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           T+  G+  RLGH    +   P  L+  +  +  V   + +  +++         V+S G 
Sbjct: 545 TWGDGDYGRLGHGDNHSRSIP-TLVKDITGVGSVSCGSSFTVVIS----QDATTVWSFGA 599

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G  GKLGHG  +    P++I   Q L ++ V  A+ +  +  +   G+V  WG G   CL
Sbjct: 600 GDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQS--SLALTSIGQVFVWGSG--PCL 655

Query: 244 GHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           G+G  +    VPK +    D++ I +A GD     ++ D DVYS+G   S          
Sbjct: 656 GYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQC------- 708

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISL--TNSIYWNA 340
           G GN ++ VL P+ VT     N  + QIS+  ++SI W A
Sbjct: 709 GLGNNNSPVLLPRKVTGFD--NHVIYQISVGTSHSIAWTA 746



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 25/184 (13%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAAVVGQDGRVCT 234
           +YS G G  GKLGHG+   +K P+LI    L  +Q  VV   A G  H+A +  +G + T
Sbjct: 490 IYSWGDGDYGKLGHGNHVTQKSPKLI----LGPMQGKVVRQIAVGYRHSAAITSEGLLYT 545

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESA 293
           WG G YG LGHG+    S+P +V+ +  V +  V+ G   T V+S+D   V+SFG G++ 
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDITGVGS--VSCGSSFTVVISQDATTVWSFGAGDNG 603

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGH     G  +R   V  P+++++L+ +  R V  +  +S+       ALT  G+++ 
Sbjct: 604 KLGH-----GDTSR---VYRPKVISNLQGLLIRKVCCASQSSL-------ALTSIGQVFV 648

Query: 354 FGAG 357
           +G+G
Sbjct: 649 WGSG 652



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D    R I   Q   +  +  + G   H+  + + G V +WG 
Sbjct: 3459 LACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGD 3518

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN E +  P+ ++AL     +HVA G   + +V+ DG +++FG  +   L  
Sbjct: 3519 GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRL-- 3576

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                 G GN  +N   P  VT+L+ +   ++     +++         T+   ++ FG G
Sbjct: 3577 -----GLGNT-SNKKLPAQVTALQPIMVELIACGANHTV------VVTTDRESVWTFGEG 3624

Query: 358  DKGQLGIELVNNQTERGNPERVD 380
            + GQLG+      T +  P+ VD
Sbjct: 3625 EYGQLGL---GRTTAKMTPQYVD 3644



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 137/321 (42%), Gaps = 32/321 (9%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
            Q   G   T +I   G V A G+ S+G    G         P  + +L+   V + A   
Sbjct: 3441 QIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRP--ITALQGFVVTELATST 3498

Query: 111  FF---TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
                 +  L+  G V+++  G+  +LGH        P  +   L    V+ +A G+ +  
Sbjct: 3499 GLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQI-EALRGEDVLHVACGHKHSA 3557

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV---AAGAWHAA 224
             +        +++ G    G+LG G+ +++K P      Q+  LQP++V   A GA H  
Sbjct: 3558 IVTVDGK---LFTFGASDLGRLGLGNTSNKKLPA-----QVTALQPIMVELIACGANHTV 3609

Query: 225  VVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
            VV  D   V T+G G YG LG G    +  P+ V A + +    +  G   T  ++++G 
Sbjct: 3610 VVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGK 3669

Query: 284  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            VYS  CG +   G   +      +HA+    Q++   +Q  E +             H  
Sbjct: 3670 VYS--CGHNRCNGIFEV----DTQHADYYPQQVMALSEQFIEDIAA--------GYEHAL 3715

Query: 344  ALTESGKLYAFGAGDKGQLGI 364
            ALT+ G ++++G    GQLG+
Sbjct: 3716 ALTKEGDVWSWGNDTDGQLGL 3736



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRYGCLGH 245
           G+LG G  +++  P+LI       ++ +V + G+  H   +  DGR+ +WG G YG LGH
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGH 503

Query: 246 GNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           GN   +  PK++      K +  +A G   +  ++ +G +Y++G G+   LGH       
Sbjct: 504 GNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGH------- 556

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           G+ H+  + P LV  +  V       S T  I  +A T        +++FGAGD G+LG
Sbjct: 557 GDNHSRSI-PTLVKDITGVGSVSCGSSFTVVISQDATT--------VWSFGAGDNGKLG 606



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 59/272 (21%)

Query: 43   SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + + A   G    ++ +++ G+V+++G   +G+  +G   ++    P+ +E+L+
Sbjct: 3485 ALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHG--NSERQRRPRQIEALR 3542

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               V+  A G+  +A+++ +G+++TF   +  RLG     N   P  +   L+ I V  I
Sbjct: 3543 GEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELI 3601

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---- 215
            A G  + + +       +V++ G G  G+LG G  T +  P+ ++ F  LN++ +     
Sbjct: 3602 ACGANHTVVVTTDRE--SVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGAR 3659

Query: 216  -----------------------------------------------VAAGAWHAAVVGQ 228
                                                           +AAG  HA  + +
Sbjct: 3660 FTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTK 3719

Query: 229  DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            +G V +WG    G LG G    +  P ++ +L
Sbjct: 3720 EGDVWSWGNDTDGQLGLGQTLPQREPCLISSL 3751



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 28/147 (19%)

Query: 234  TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
            TWG GR+G L          P +  + +  K IH   G  +TFV+  DG V + G G   
Sbjct: 3411 TWGGGRHGQLAESGRLVLQ-PTLTSSFSKAKQIHC--GHNSTFVIEHDGTVLACGEGSYG 3467

Query: 294  SLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             L       GQGN       P+L  +T+L    +  V   L  S     H+ ALTE+G++
Sbjct: 3468 RL-------GQGNSDD---LPRLRPITAL----QGFVVTELATSTGLEGHSLALTETGEV 3513

Query: 352  YAFGAGDKGQLGIELVNNQTERGNPER 378
            +++G GD G+LG          GN ER
Sbjct: 3514 FSWGDGDYGKLG---------HGNSER 3531



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 30   LGREV-NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF-GEAEYGVQGTK 87
            LGR     TP Y  +   + I +   GA  T+ ++  G+VY+ G +   G  E   Q   
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690

Query: 88   LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPH 145
                PQ V +L   F+   A G      L++EG V+  SWGND   +LG        EP 
Sbjct: 3691 YY--PQQVMALSEQFIEDIAAGYEHALALTKEGDVW--SWGNDTDGQLGLGQTLPQREP- 3745

Query: 146  PLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
             L+ +L+   + QI+AG+ +  A    P+ +
Sbjct: 3746 CLISSLQGKGIRQISAGHNHSAAWTVAPASI 3776


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 179/387 (46%), Gaps = 46/387 (11%)

Query: 11  LSPILRPDII----NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAG 66
           ++P+ RP  +    +  +G+  + G +         +L    +    AG+  ++ I D G
Sbjct: 1   MAPLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDG 60

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +++ +G +  G   +  + TK  +SP  VE+L  + +VQAAIG +    +  +GR Y  +
Sbjct: 61  RLFTWGWNQRGTLGHPPE-TKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAY--A 117

Query: 127 WGNDARLGHHTEPNDVE----------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           WG +       EP   E          P P    L+ + V Q+AAG  + + L  +    
Sbjct: 118 WGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALK-LKVQQVAAGGTHSVVLTQEGH-- 174

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            V++     G     G       P  ++  + +    +++A GA+H   + +D  +  WG
Sbjct: 175 -VWT----WGQPWPPGDIKQISTPVRVQGLEKV----MMIAVGAFHNLALSEDAVLWAWG 225

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              YG LG G+ +  S P  V+ L+ +  + +A G + +  +++DG+VY++G GE   LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                   G+  ++ + P  V  L    E +VQ+S   +     H+ ALT  G+++++G 
Sbjct: 286 F-------GDDKSSHMVPLKVQLLD--GEDIVQVSCGGT-----HSVALTSDGRIFSYGR 331

Query: 357 GDKGQLGIELVNNQTERGNPERVDIDL 383
           GD G+LG      +   G+P  V ++L
Sbjct: 332 GDHGRLGY---GRKVTTGHPMEVPLNL 355


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 31/280 (11%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           G   ++S+  +VY +G +S  +   G Q  + +  P+L  S  +   ++A  G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418

Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           S +G V     G+  RLG     N         EPH    +++ +   + + G+     L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR---SIKKVSSSKGSDGH----TL 471

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A    G  V+S G G  GKLGHG+ + +K+P+LI Q  L     V V+AG  H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
           G + TWG G +G LGHG+    ++P +V+ +++V    V+ G   T  +S+DG  V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
            G++  LGH     G  NR   V  P+++ +L+ +  R V
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKV 619



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           ++S    VY +   +  +L   T+   ++P  L  +  +   ++ A  YC  +      +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPK-LAPSFSDAQTIE-AGQYCTFVI----ST 420

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVC 233
             +V + G G  G+LG G   ++   + +      +++ V  + G+  H      +G V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           +WG G YG LGHGN   +  PK++Q  L     + V+ G   +  V+EDG++Y++G G+ 
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-L 351
             LGH     G  N   N+  P LV  +  V E    +S  +S     HT AL++ G+ +
Sbjct: 541 GRLGH-----GDSNSR-NI--PTLVKDISNVGE----VSCGSS-----HTIALSKDGRTV 583

Query: 352 YAFGAGDKGQLG 363
           ++FG GD G+LG
Sbjct: 584 WSFGGGDNGKLG 595



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 11/190 (5%)

Query: 45  QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
           + I+ + ++ G+ G T+  +  G+V+++G   +G+  +G   T+    P+L++  L+   
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VV  + G   +A ++ +G +YT+  G+  RLG H + N      L+  + N  V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+    G  V+S G G  GKLGHG       P++IE  Q + ++   V AG+  
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625

Query: 223 AAVVGQDGRV 232
           +  +   G+V
Sbjct: 626 SLALTSTGQV 635



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG  ++  +AG   +  +++ G++Y +G+  FG   +G   ++ +  P LV+ + N  V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + + G+  T  LS++GR V++F  G++ +LG H + N V    ++  L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 163 YCYLLAL 169
               LAL
Sbjct: 623 SQSSLAL 629


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 26/343 (7%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  EV   P  C   +G R+     G   T+ + + G VY  G +  G+  +     K  
Sbjct: 17  IDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGH----EKAR 72

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+ V SL    +V  + G   T  L+ +G+V+ +  G+D +LG     + +     + 
Sbjct: 73  KKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVK 132

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQL 208
           +L  + + Q+A GY + LALA    G  ++S G    G+LG G +      P++I+  Q 
Sbjct: 133 SLSEVHITQVACGYWHSLALA---RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQG 189

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
           +    +  +AG  H+  +   G +  WG  ++G LG G+ +    P +++ L   + +++
Sbjct: 190 IPFGQI--SAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYI 247

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
             G+  T  ++++G V++FG G    LGHN+      N   N   P+ V  L  +   V 
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNST-----NHEVN---PRKVFEL--MGSVVS 297

Query: 329 QISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLGIELVNNQ 370
           QI+         HT A +  SGK+ +FG G  GQLG     N+
Sbjct: 298 QIACGRQ-----HTLAFIPSSGKIDSFGLGGNGQLGTRSTCNR 335



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  SFG+   G    +++  P+  E  +   V     G   T  L  +G VYT   
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E    +P  ++ +L+   +V ++ G  + LAL        V++ G G  G
Sbjct: 61  NDLGQLGH--EKARKKPEQVV-SLDAQNIVAVSCGEAHTLALN---DKGQVFAWGLGSDG 114

Query: 188 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG     D  + PR ++    +++    VA G WH+  + + G + +WG  +YG LG G
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEVHITQ--VACGYWHSLALARGGEIFSWGQNKYGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
            +  C   P+V+Q+L  +    ++ G   +F ++  G ++ +G  +   LG   + D   
Sbjct: 173 QQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLG---LGDNDD 229

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
            R      P L+ +L+  +++VV I          HT ALT+ G ++ FGAG  GQLG  
Sbjct: 230 RRF-----PVLLKTLR--SQQVVYICCGED-----HTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 STNHEV---NPRKV 288



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  ++L+  +++    G   T  ++  G V+ FG   +G+   G   T    +P+ V  
Sbjct: 233 PVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTNHEVNPRKVFE 290

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V Q A G   T A +   G++ +F  G + +LG  +  N + P P+ G
Sbjct: 291 LMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVKG 343


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 162/342 (47%), Gaps = 26/342 (7%)

Query: 31  GREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           GR+ N T P   ++LQG  ++ AA G+  +  ++  G++Y  G +     + GV+G ++ 
Sbjct: 53  GRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND--ARQLGVKGREVA 110

Query: 90  TSPQLVESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPH 145
             P  V +L+  N+  V    G+    V       +  +WG++   +LG           
Sbjct: 111 LEPIRVSALEMNNVHGVACGQGHMLAVV----DNGHLAAWGSNEYGQLGTGEVGASAAQP 166

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
            +L  +      ++AAG  + LAL    S   VYS G G  G LGHG   +   P L++ 
Sbjct: 167 RVLKRIRGAHFARVAAGATHSLALT---SSGQVYSFGEGSFGALGHGDVNNRAKPTLVQA 223

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
                +  V +AAG + +A V   GRV TWG  +YG LG+G      +P+ V  +   +A
Sbjct: 224 LWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIE--QA 279

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           + VA GD+    ++  G+VY++G   S  LG  +   G    +  + +P  V SL   ++
Sbjct: 280 VQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNL-GSEALNGCLCSPSRVDSL--ADQ 336

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
            + Q+S         H+F ++   +L+  GA D+GQL ++ V
Sbjct: 337 SIRQVSAGAR-----HSFFVSPGEQLWGAGANDEGQLALQSV 373



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 28/298 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G+   G+   G       T+P+ V++L+   VV AA G++ +A ++R+G +YT + 
Sbjct: 39  LYTWGRSDLGQTGSGRDQNS--TAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYT-TG 95

Query: 128 GNDAR-LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
            NDAR LG       +EP   +  LE   V  +A G  ++LA+      +A +  G    
Sbjct: 96  SNDARQLGVKGREVALEPI-RVSALEMNNVHGVACGQGHMLAV-VDNGHLAAW--GSNEY 151

Query: 187 GKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G+LG G        PR++++ +  +     VAAGA H+  +   G+V ++G G +G LGH
Sbjct: 152 GQLGTGEVGASAAQPRVLKRIRGAHF--ARVAAGATHSLALTSSGQVYSFGEGSFGALGH 209

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G+    + P +VQAL     + +A G+Y +  VS  G V+++G  +   LG+        
Sbjct: 210 GDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEF----- 264

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               N   PQ V  ++Q     VQ++  +      H  ALT  G++Y +G    GQLG
Sbjct: 265 ---GNAFLPQPVPGIEQ----AVQVACGDH-----HCIALTRWGEVYTWGLHSSGQLG 310



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 18/251 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   + ++G    + AAGA  ++ ++ +GQVY+FG+ SFG   +G    +    P LV++
Sbjct: 166 PRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNR--AKPTLVQA 223

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L    +V  A G +F+A +S  GRV+T+      +LG+    N   P P+ G  +    V
Sbjct: 224 LWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIEQ---AV 280

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-------HPRLIEQFQLLN 210
           Q+A G  + +AL        VY+ G    G+LG GS    +        P  ++     +
Sbjct: 281 QVACGDHHCIALT---RWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQS 337

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA-IHVA 269
           ++   V+AGA H+  V    ++   G    G L   +    ++P  V  L  +     VA
Sbjct: 338 IR--QVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRVPGLPGLPMRFAVA 395

Query: 270 TGDYTTFVVSE 280
            GD++  V+ E
Sbjct: 396 AGDHSIAVLDE 406



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 38/177 (21%)

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           TWG    G  G G ++  + P+ VQAL     +H A G Y +  V+ DG++Y+ G  ++ 
Sbjct: 41  TWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDAR 100

Query: 294 SLGH--------------------NAIADGQG----------------NRHANVLTPQLV 317
            LG                     + +A GQG                N +  + T ++ 
Sbjct: 101 QLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160

Query: 318 TSLKQ--VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            S  Q  V +R+             H+ ALT SG++Y+FG G  G LG   VNN+ +
Sbjct: 161 ASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAK 217


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 139/330 (42%), Gaps = 56/330 (16%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G    +L++  GQ+Y++G++S G   +GV     V  P+L++      V  A  G F 
Sbjct: 302 SCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPKLIDEFNGSTVELADCGEFH 359

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +Y  +WG    N   LG  +  +  +P  +LG +E I          Y+ A
Sbjct: 360 TCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILGQMEGI----------YVKA 407

Query: 169 LACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           ++C P       S   +++ G G  G LGHG R     PR +E   L   + +  A G W
Sbjct: 408 ISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVE--ALNGCRTIKAACGVW 465

Query: 222 HAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           H+A V          G++ TWG G  G LGHG+ EC  +P  V  L+      VA G   
Sbjct: 466 HSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSI 525

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T  +S  G VY+ G  + +              H  V  P  +       E  +  S   
Sbjct: 526 TVALSMSGQVYAMGTADPS--------------HDIVRAPSCI-------EGGLGKSFVQ 564

Query: 335 SIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
            +    H  A L    ++Y +G G  GQLG
Sbjct: 565 EVACGFHHIAVLNSKAEVYTWGKGSNGQLG 594



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)

Query: 86  TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 140
           + L+T   L + LK+   + A   + G  +  +++++G++Y  SWG ++  RLGH     
Sbjct: 278 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 333

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              PHP L    N   V++A    +          +  +  G    G LG GS      P
Sbjct: 334 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 393

Query: 201 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
            R++ Q + + ++   ++ G WH A V  +G++ T+G G +G LGHG+    ++P+ V+A
Sbjct: 394 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 451

Query: 260 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           LN  + I  A G + +  V       +  G ++++G G+   LGH  I           L
Sbjct: 452 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 503

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            P  VT L   +    Q++   SI     T AL+ SG++YA G  D
Sbjct: 504 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 542



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 27/245 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   + G   T  ++  G+++ FG  +FG   +G + +  +  P+ VE+L     
Sbjct: 400 MEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRT 457

Query: 104 VQAAIGNFFTAVL-------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLEN 153
           ++AA G + +A +       +  G+++T+  G+D RLGH     D+E   +   +  L+ 
Sbjct: 458 IKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDT 513

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G    +AL+   SG  VY++G          S    + P  IE   L     
Sbjct: 514 TSFQQVACGQSITVALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFV 563

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             VA G  H AV+     V TWG G  G LGHG+ E   +P +V+AL   +   V  G +
Sbjct: 564 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 623

Query: 273 YTTFV 277
           YT  +
Sbjct: 624 YTATI 628



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 20/190 (10%)

Query: 180 SVGCGL--GGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S+G GL  GG    GS     TD   P++++    L+ Q +  + G  +A +V + G++ 
Sbjct: 261 SIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSI--SCGTNYAVLVTKQGQMY 318

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           +WG    G LGHG       PK++   N         G++ T  V+  GD+Y++G G+  
Sbjct: 319 SWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGD-- 376

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
              HNA   G G+  ++    +++  ++ +  + +         W  HT  +T  GKL+ 
Sbjct: 377 ---HNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP-----W--HTAFVTSEGKLFT 426

Query: 354 FGAGDKGQLG 363
           FG G  G LG
Sbjct: 427 FGDGTFGALG 436


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 43/330 (13%)

Query: 53  AAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGN 110
             G   TML+S +  Q+Y+ G  SF   +   + T   +  P LV  LK+  + Q A G 
Sbjct: 101 VCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGR 160

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL----LGTLENIPVVQIAAGYCYL 166
             T VL+ + RV++F  G++ +LG  +  N  +P P+    L  L NI  +++  G+ + 
Sbjct: 161 RHTLVLTEDFRVFSFGVGSEYQLGVGSTEN--QPLPVEIESLSKLGNI--IKLECGWGHS 216

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAV 225
           L L    S   +++ G     + GHG   +  H P++I+     N +   +  G+     
Sbjct: 217 LVLT---SDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT----NYKFKNIFTGSDFNLA 269

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--------DVKAIH----VATGDY 273
           +  DGRVC+WG G +G LGHG+ +    PK++Q++         +   I+    VA G  
Sbjct: 270 ITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFS 329

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
              ++  DG + + G   +  LG     D       N L P  +       E+VV++S  
Sbjct: 330 HALIIDNDGKLLTLGWNGNGQLGSGVKGD-------NHLVPTKL-EFDFDGEKVVKVSAG 381

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +     H+  +TESGKLY +G G+KG+LG
Sbjct: 382 RN-----HSACITESGKLYIWGNGNKGKLG 406



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 36/314 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L+  +I Q A G   T+++++  +V++FG  S  E + GV  T+    P  +ES
Sbjct: 142 PSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGS--EYQLGVGSTENQPLPVEIES 199

Query: 98  LK---NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           L    NI  ++   G+  + VL+ +G ++T+ +  D++ GH      +    ++ T  N 
Sbjct: 200 LSKLGNIIKLECGWGH--SLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NY 255

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ------L 208
               I  G  + LA+    +   V S G G  G+LGHG   + + P+LI+  Q      L
Sbjct: 256 KFKNIFTGSDFNLAIT---NDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNL 312

Query: 209 LNLQPV----VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVP-KVVQALND 262
           +N   +    +VA G  HA ++  DG++ T GW   G LG G + +   VP K+    + 
Sbjct: 313 INTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDG 372

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            K + V+ G   +  ++E G +Y +G G    LG+       G    + LTP  +  + +
Sbjct: 373 EKVVKVSAGRNHSACITESGKLYIWGNGNKGKLGN-------GKSVGDQLTPLELIDIDE 425

Query: 323 -----VNERVVQIS 331
                 N++V+ IS
Sbjct: 426 NNTDPSNQKVLNIS 439



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 31/203 (15%)

Query: 178 VYSVGCGLGGKLGHGSR--TDEKHPRLIEQFQ-----------LLNLQPVVVAAGAWHAA 224
           +YS GCG+ GKLG  +     E  P  + +F              NL+   +  G +H  
Sbjct: 49  LYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGHYHTM 108

Query: 225 VVGQD-GRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +V ++  ++ + GW  +  +   N+E      +P +V  L D K   VA G   T V++E
Sbjct: 109 LVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTE 168

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           D  V+SFG G    LG  +          N   P  + SL ++   ++++       W  
Sbjct: 169 DFRVFSFGVGSEYQLGVGST--------ENQPLPVEIESLSKLG-NIIKLECG----W-G 214

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           H+  LT  G ++ +G     Q G
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTG 237



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 15/112 (13%)

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV--LTPQLVT 318
           ++++   +  G Y T +VS++ D   + CG ++ +  + +     N+  N   + P LVT
Sbjct: 93  DNLECKDIVCGHYHTMLVSKEKDQL-YSCGWTSFVAMDRV-----NKETNFKSIIPSLVT 146

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            LK    ++ Q++         HT  LTE  ++++FG G + QLG+    NQ
Sbjct: 147 PLKDF--KIKQVAGGRR-----HTLVLTEDFRVFSFGVGSEYQLGVGSTENQ 191



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 17/135 (12%)

Query: 52  AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 111
            A G    ++I + G++   G +  G+   GV+G   +   +L        VV+ + G  
Sbjct: 324 VACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRN 383

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLENIPVVQIAAGYCYLLALA 170
            +A ++  G++Y +  GN  +LG+     D + P  L+   EN                 
Sbjct: 384 HSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN----------------N 427

Query: 171 CQPSGMAVYSVGCGL 185
             PS   V ++ CG 
Sbjct: 428 TDPSNQKVLNISCGF 442


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 43/344 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + +   + G     LI+  G+++++G+   G   + +     +  P+LV+S
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 368

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 152
           L  I     A G + T  L++ G VYT  WG D+R G     E N      P  L G L+
Sbjct: 369 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 425

Query: 153 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            I +  +A G  +   + AC      +++ G G  G LGHG+      P+ +E    L +
Sbjct: 426 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 481

Query: 212 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           + V  A G+WH A +              G++ TWG G  G LGHG+ E + +P  V  L
Sbjct: 482 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 539

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            D     V+ G   T  ++  G VY+ G      LG+ +      +R A+V   +     
Sbjct: 540 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS------SRDASVAIVE----- 588

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            ++ E  V+ ++++  Y   H  +LT +G++Y +G G  GQLG+
Sbjct: 589 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 628



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 35/277 (12%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           D   E N +   L ++++G       L+GI I   A G   T ++S  G+++ +G  +FG
Sbjct: 404 DFDCEENSRSRWLPQKLSGP------LKGISISNVACGEWHTAVVSACGRLFTYGDGTFG 457

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-----------SREGRVYTFS 126
              +G      ++ P+ VESL  + V   A G++ TA +           S  G+++T+ 
Sbjct: 458 ALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWG 515

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGL 185
            G+  +LGH      + P   +  L +    Q++ G    + L    + M  VY++G  +
Sbjct: 516 DGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVGL----TNMGRVYTMGSSI 570

Query: 186 GGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            G+LG+ S  D        +L E+F         +++G++H A +   GRV TWG G +G
Sbjct: 571 HGQLGNLSSRDASVAIVEGKLKEEFV------KAISSGSYHVASLTSTGRVYTWGKGAHG 624

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
            LG G+ +  ++P  V+AL D +   +A G   T  +
Sbjct: 625 QLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 661


>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
          Length = 439

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + +   A  ++LI+  G+++++G
Sbjct: 33  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVQVRTVVSGPCAAHSLLITTEGKLWSWG 91

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L    +V AA G   T  L+  G V+ F      +
Sbjct: 92  RNEKGQLGHG--DTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 149

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 150 LGLGNQ-TDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 205

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A G  H  V+    
Sbjct: 206 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQK 265

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 266 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWG 325



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 55  PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 112

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E   +L+ + +V AA G  H   + + G V  +G  + G LG GN+  +++P   Q + +
Sbjct: 113 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAIPSPAQIMYN 168

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 169 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 228

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 229 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 279



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 34  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 79

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             +++ EG+++++      +LGH  +   VE   L+  L    +V  A G  + LAL   
Sbjct: 80  --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 230
            S   V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 137 GS---VFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 189

Query: 231 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 266
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 190 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 249

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 250 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 301

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             QI    +      +FA++E G L+ +GA
Sbjct: 302 AAQIYAGYTC-----SFAVSEVGGLFFWGA 326



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 53  WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 97

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L +  E +V  +   +     HT ALTE+G ++AF
Sbjct: 98  LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 142

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 143 GENKMGQLGL---GNQTD 157



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G +I   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 331 RESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 390

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I+  Q A+G   + V++R+
Sbjct: 391 AQEVKTLDGIYTEQVAMGYSHSLVIARD 418


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 148/332 (44%), Gaps = 40/332 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G+V+ +G+DS G   +G +   +   P+LVESL    +   
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVESLAASNIDFV 134

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G F T  ++  G +YT  WG    N   LGH T+     P  + G LE +   QIA  
Sbjct: 135 ACGEFHTCAVTTTGELYT--WGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL---QIAYV 189

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
            C     A   S   +++ G G  G LGHG+      PR +E   L  L+ + VA G WH
Sbjct: 190 SCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVES--LSGLKTIAVACGVWH 247

Query: 223 AA-----VVGQD------GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            A     +V Q       G++ TWG G    LGHG++E    P  V +L D     VA G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACG 307

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++  G V++ G      LG N  +DG+         P LV   K  +E V+QI+
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLG-NPNSDGR---------PCLVED-KIASEHVLQIA 356

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  + H   LT   +++ +G G  G+LG
Sbjct: 357 CG-----SYHVAVLTSRSEVFTWGKGANGRLG 383



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 20/239 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++I   + G   T LI+  GQ++ FG  SFG   +G    K ++ P+ VESL  +  
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKT 238

Query: 104 VQAAIGNFFTAVLSR-----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L 
Sbjct: 239 IAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKP-TCVASLI 297

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    ++A G+   + L    +   V+++G  + G+LG+ +   +  P L+E  ++ +  
Sbjct: 298 DYDFYRVACGHSLTVGLT---TSGKVWTMGNSVYGQLGNPN--SDGRPCLVED-KIASEH 351

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            + +A G++H AV+     V TWG G  G LGHG+ E   VP  V+AL D    H+A G
Sbjct: 352 VLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACG 410



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 37/287 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLG 149
           P+ +ES   + V     G    ++++R G V+T  WG D+  RLGH T  + V P  L+ 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFT--WGEDSGGRLGHGTREDSVHPR-LVE 124

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQ 207
           +L    +  +A G  +  A+    +   +Y+ G G    G LGHG+      PR I    
Sbjct: 125 SLAASNIDFVACGEFHTCAVT---TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISG-P 180

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           L  LQ   V+ G WH A++   G++ T+G G +G LGHGN +  S P+ V++L+ +K I 
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA 240

Query: 268 VATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           VA G + T  + E            G ++++G G+   LGH       G++ A  L P  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-------GDKEAR-LKPTC 292

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V SL  ++    +++  +S+     T  LT SGK++  G    GQLG
Sbjct: 293 VASL--IDYDFYRVACGHSL-----TVGLTTSGKVWTMGNSVYGQLG 332


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 43/344 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + +   + G     LI+  G+++++G+   G   + +     +  P+LV+S
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMD--LDHPKLVDS 348

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVE---PHPLLGTLE 152
           L  I     A G + T  L++ G VYT  WG D+R G     E N      P  L G L+
Sbjct: 349 LNGIAAKSVACGEYQTCALTKAGEVYT--WG-DSRFGADFDCEENSRSRWLPQKLSGPLK 405

Query: 153 NIPVVQIAAGYCYLLAL-ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            I +  +A G  +   + AC      +++ G G  G LGHG+      P+ +E    L +
Sbjct: 406 GISISNVACGEWHTAVVSACG----RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCV 461

Query: 212 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           + V  A G+WH A +              G++ TWG G  G LGHG+ E + +P  V  L
Sbjct: 462 KSV--ACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPL 519

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            D     V+ G   T  ++  G VY+ G      LG+ +      +R A+V   +     
Sbjct: 520 VDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLS------SRDASVAIVE----- 568

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            ++ E  V+ ++++  Y   H  +LT +G++Y +G G  GQLG+
Sbjct: 569 GKLKEEFVK-AISSGSY---HVASLTSTGRVYTWGKGAHGQLGL 608



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 35/277 (12%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           D   E N +   L ++++G       L+GI I   A G   T ++S  G+++ +G  +FG
Sbjct: 384 DFDCEENSRSRWLPQKLSGP------LKGISISNVACGEWHTAVVSACGRLFTYGDGTFG 437

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-----------SREGRVYTFS 126
              +G      ++ P+ VESL  + V   A G++ TA +           S  G+++T+ 
Sbjct: 438 ALGHG--NLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWG 495

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGL 185
            G+  +LGH      + P   +  L +    Q++ G    + L    + M  VY++G  +
Sbjct: 496 DGDKGKLGHGDNERKLLP-TCVAPLVDCDFAQVSCGRMLTVGL----TNMGRVYTMGSSI 550

Query: 186 GGKLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            G+LG+ S  D        +L E+F         +++G++H A +   GRV TWG G +G
Sbjct: 551 HGQLGNLSSRDASVAIVEGKLKEEFV------KAISSGSYHVASLTSTGRVYTWGKGAHG 604

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
            LG G+ +  ++P  V+AL D +   +A G   T  +
Sbjct: 605 QLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAI 641


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 150/330 (45%), Gaps = 40/330 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  R L  +  I    G   TM +   G V+ +G +  G+   G    K V +P  V 
Sbjct: 76  TPVQARGLNDVMDIHT--GVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVPTP--VS 131

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L  I  +   +G + +  L+  G V+T+   ++  LG+ T      P  ++G  +   V
Sbjct: 132 GLSGIKAISGGLG-YHSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD---V 187

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
             IAAG  Y LAL    +   +++ G    G+LG G+  D+  P      Q+  L  V+ 
Sbjct: 188 TAIAAGGYYSLALKSDGT---IWAWGANGNGELGDGTIVDKHTP-----VQVSGLSDVIA 239

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG  H+  + QDG V  WG   YG LG G     ++P  V+ L  +KAI  A G + +
Sbjct: 240 ITAGGSHSLAIKQDGTVWAWGINMYGTLGDGTRTNRTIPVKVRNLQHIKAI--AGGGHHS 297

Query: 276 FVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             + ++G+V+ +G        LGHN          ++  TP+ +T +    E V+ I+  
Sbjct: 298 LALDQEGNVWGWGDNSRGQLGLGHN----------SSRTTPEQLTGI----EHVLDIAGG 343

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  H+ AL + G+++ +G    GQ+G
Sbjct: 344 -----GFHSAALKKDGRVWGWGLNSSGQIG 368



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 43/330 (13%)

Query: 54  AGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           AG   T  +  +G VY +G   +   G+A +  + T     P     L ++  +   + +
Sbjct: 41  AGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNT-----PVQARGLNDVMDIHTGVRS 95

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             T  L  +G V+T+    + +LG  T  +   P P+ G L  I  +    GY    ++A
Sbjct: 96  --TMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSG-LSGIKAISGGLGYH---SMA 149

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 229
              +G  V++ G    G+LG+G+   +  P L+     + L  V  +AAG +++  +  D
Sbjct: 150 LTENG-TVWTWGKNDNGELGNGTTVQQNSPVLV-----IGLSDVTAIAAGGYYSLALKSD 203

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G +  WG    G LG G    +  P  V  L+DV AI    G   +  + +DG V+++G 
Sbjct: 204 GTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAI--TAGGSHSLAIKQDGTVWAWGI 261

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
               +LG        G R  N   P  V +L+ +                 H+ AL + G
Sbjct: 262 NMYGTLG-------DGTR-TNRTIPVKVRNLQHIKAIAGG---------GHHSLALDQEG 304

Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            ++ +G   +GQLG+    + + R  PE++
Sbjct: 305 NVWGWGDNSRGQLGL---GHNSSRTTPEQL 331



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 116/290 (40%), Gaps = 57/290 (19%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L GI+ I    G   +M +++ G V+ +GK+  GE   G   T    SP LV  
Sbjct: 127 PTPVSGLSGIKAISGGLGY-HSMALTENGTVWTWGKNDNGELGNGT--TVQQNSPVLVIG 183

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L ++  + A  G +++  L  +G ++ +    +  LG  T  +   P  + G  +   V+
Sbjct: 184 LSDVTAIAA--GGYYSLALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSD---VI 238

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ---------- 207
            I AG  + LA+    +   V++ G  + G LG G+RT+   P  +   Q          
Sbjct: 239 AITAGGSHSLAIKQDGT---VWAWGINMYGTLGDGTRTNRTIPVKVRNLQHIKAIAGGGH 295

Query: 208 -----------------------------------LLNLQPVV-VAAGAWHAAVVGQDGR 231
                                              L  ++ V+ +A G +H+A + +DGR
Sbjct: 296 HSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTGIEHVLDIAGGGFHSAALKKDGR 355

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           V  WG    G +G G     + P + +A+ D  A     G  + ++++ D
Sbjct: 356 VWGWGLNSSGQIGDGTRNDRNAPALTKAVLDTTAPDTGRGMLSPYLITVD 405



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG +H A +   G V  WG G  G +G       + P   + LNDV  IH  TG  +T
Sbjct: 39  LVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIH--TGVRST 96

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G  E+  LG    AD       NV TP  V+ L  +  + +   L   
Sbjct: 97  MALRSDGTVWTWGSNENGQLGIGTTAD------KNVPTP--VSGLSGI--KAISGGL--- 143

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                H+ ALTE+G ++ +G  D G+LG
Sbjct: 144 ---GYHSMALTENGTVWTWGKNDNGELG 168


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + +   A  ++LI+  G+++++G
Sbjct: 77  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVQVRTVVSGPCAAHSLLITTEGKLWSWG 135

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L    +V AA G   T  L+  G V+ F      +
Sbjct: 136 RNEKGQLGHG--DTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 193

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 194 LGLGNQ-TDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 249

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A G  H  V+    
Sbjct: 250 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQK 309

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 310 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWG 369



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 99  PH-RYGCLSGVQVRTVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 156

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E   +L+ + +V AA G  H   + + G V  +G  + G LG GN+  +++P   Q + +
Sbjct: 157 E---VLSKEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAIPSPAQIMYN 212

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 213 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 272

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 273 AIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 323



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 132/330 (40%), Gaps = 67/330 (20%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 78  GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL-------------- 123

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             +++ EG+++++      +LGH  +   VE   L+  L    +V  A G  + LAL   
Sbjct: 124 --LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALT-- 178

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 230
               +V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 179 -ETGSVFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 233

Query: 231 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 266
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 234 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 293

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            VA G   T V+     V+S+G G    LGH    D         + P+LV         
Sbjct: 294 DVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRG 345

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             QI    +      +FA++E G L+ +GA
Sbjct: 346 AAQIYAGYTC-----SFAVSEVGGLFFWGA 370



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 97  WGPHRYGCL--------SGVQVRTVVSGPCAAH-------SLLITTEGKLWSWGRNEKGQ 141

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L +  E +V  +   +     HT ALTE+G ++AF
Sbjct: 142 LGH-----GDTKR---VEAPKLIEVLSK--EVIVSAACGRN-----HTLALTETGSVFAF 186

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 187 GENKMGQLGL---GNQTD 201



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G +I   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 375 RESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 434

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I+  Q A+G   + V++R+
Sbjct: 435 AQEVKTLDGIYTEQVAMGYSHSLVIARD 462


>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
 gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
          Length = 1711

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 40/262 (15%)

Query: 105  QAAI---GNFFTAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLEN 153
            QAA+   G    A+L+ EG VYT+   +  RLGH        +  P  VE      +++ 
Sbjct: 866  QAAVVSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVE----TLSIQR 920

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
            + V+ +A G  + LAL        VY+ G    G+LG G    + HP L+ Q +  ++  
Sbjct: 921  VQVMAVACGQEHTLALC----DNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLK--DVFC 974

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V VA G +H+A +  +GRV  WGWG +G LG GN E  + P +V A+ +  A+ V+TG  
Sbjct: 975  VAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQN--AVQVSTGYA 1032

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             T V++  G+V++FGCG    LGH A           V  PQ V   + +  +V Q++  
Sbjct: 1033 HTAVLTRSGEVFTFGCGLHGQLGHGAT--------DKVSIPQRV---QGIMGKVAQVAC- 1080

Query: 334  NSIYWNAHTFALTESGKLYAFG 355
              ++   HT  +T S ++Y FG
Sbjct: 1081 -GLF---HTVVVTSSQQVYTFG 1098



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 19/225 (8%)

Query: 23   RNGKRNLLGREVNGTPLYCR--SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
            R G   LLG      P+     S+Q ++++  A G   T+ + D G VYA+G  ++G+  
Sbjct: 895  RLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQ-- 951

Query: 81   YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
             G+      T P LV  LK++F V  A G + +A L  EGRV+ + WG   +LG     N
Sbjct: 952  LGLGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAEN 1011

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              +PH L+  ++N   VQ++ GY +   L    SG  V++ GCGL G+LGHG+      P
Sbjct: 1012 LNKPH-LVAAVQN--AVQVSTGYAHTAVLT--RSG-EVFTFGCGLHGQLGHGATDKVSIP 1065

Query: 201  RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG-----WGRY 240
            + ++       Q   VA G +H  VV    +V T+G     W +Y
Sbjct: 1066 QRVQGIMGKVAQ---VACGLFHTVVVTSSQQVYTFGRHPQVWKQY 1107



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 45/345 (13%)

Query: 53   AAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVE--SLKNIFVVQAAIG 109
            + G     L+++ G VY +GK   G   +G + G      P  VE  S++ + V+  A G
Sbjct: 871  SCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACG 929

Query: 110  NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCYL 166
               T  L   G    ++WG+    +LG      D + HP L T L+++  V +A G  + 
Sbjct: 930  QEHTLALCDNG---VYAWGSSTYGQLG--LGDWDRQTHPTLVTQLKDVFCVAVATGQYHS 984

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
             AL  +     V+  G G+ G+LG G+  +   P L+   Q      V V+ G  H AV+
Sbjct: 985  AALDGEGR---VWMWGWGVHGQLGQGNAENLNKPHLVAAVQ----NAVQVSTGYAHTAVL 1037

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             + G V T+G G +G LGHG  +  S+P+ VQ +   K   VA G + T VV+    VY+
Sbjct: 1038 TRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYT 1096

Query: 287  FG---------CGESASLGHNAIADGQG-NRHANVLTPQLVTSL---KQVNERVVQIS-- 331
            FG            S      + +  Q   +HA  L+ +L   L    +V  R+ Q+   
Sbjct: 1097 FGRHPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAG 1156

Query: 332  ------LTNSIYWNA----HTFALTESGKLYAFGAGDKGQLGIEL 366
                  LT+S+   A     + A+  SGK++ +G    GQLGI++
Sbjct: 1157 AVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQLGIDM 1201


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 154/342 (45%), Gaps = 42/342 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL    +  +++I  A G     L++  G+V+ +G++S G   +GV     V+ PQLVE+
Sbjct: 305 PLESALVLDVQLI--ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 360

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLEN 153
           L +      A G +    ++  G +Y  SWG    N   LGH  + +   P  + G LE 
Sbjct: 361 LASSTTEVVACGEYHACAVTLSGDLY--SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEG 418

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           + V  IA G  +   +    +G+ +++ G G  G LGH  R     PR +E   L  L+ 
Sbjct: 419 LRVASIACGPWHTALVTT--TGL-LFTFGDGTFGVLGHNDRKSAYSPREVE--SLKGLRT 473

Query: 214 VVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           V  A G WH A V +             G++ TWG G  G LGHG++E   VP  V AL 
Sbjct: 474 VRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALV 533

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           D     VA G   T  ++  G V++ G      LG +  ADG+         P LV    
Sbjct: 534 DHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLG-DPQADGK--------LPGLVEG-- 582

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               ++V+  + +      H   LT + ++Y +G G  G+LG
Sbjct: 583 ----KLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLG 620



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+R+   A G   T L++  G ++ FG  +FG    G    K   SP+ VESLK +  
Sbjct: 416 LEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGV--LGHNDRKSAYSPREVESLKGLRT 473

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G   RLGH  +   + P   +  L
Sbjct: 474 VRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPT-CVAAL 532

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q+A GY   +AL  +     V+++G    G+LG   + D K P L+E  +L+  
Sbjct: 533 VDHNFRQVACGYSLTVALTTK---GGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEA 587

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA H AV+  +  V TWG G  G LGHG+ E  + P +V+AL + +   +A G
Sbjct: 588 YVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACG 647

Query: 272 DYTTFVV 278
              T  +
Sbjct: 648 ATFTAAI 654



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 34/286 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V   A G    A+++++G V+T+   +  RLGH  + +   P  L+  L
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQ-LVEAL 361

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLL 209
            +     +A G  +  A+        +YS G G    G LGHG+      P+ +    L 
Sbjct: 362 ASSTTEVVACGEYHACAVTLSGD---LYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLE 417

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L+   +A G WH A+V   G + T+G G +G LGH + +    P+ V++L  ++ +  A
Sbjct: 418 GLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAA 477

Query: 270 TGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            G + T  V E             G ++++G GE   LGH       G++    L P  V
Sbjct: 478 CGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGH-------GDKEQR-LVPTCV 529

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +L  V+    Q++   S+     T ALT  G ++  G+   GQLG
Sbjct: 530 AAL--VDHNFRQVACGYSL-----TVALTTKGGVFTMGSSTYGQLG 568


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 139/330 (42%), Gaps = 56/330 (16%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G    +L++  GQ+Y++G++S G   +GV     V  P+L++      V  A  G F 
Sbjct: 305 SCGTNYAVLVTKQGQMYSWGEESGGRLGHGV--CSYVPHPKLIDEFNGSTVELADCGEFH 362

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +Y  +WG    N   LG  +  +  +P  +LG +E I          Y+ A
Sbjct: 363 TCAVTASGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILGQMEGI----------YVKA 410

Query: 169 LACQP-------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           ++C P       S   +++ G G  G LGHG R     PR +E   L   + +  A G W
Sbjct: 411 ISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVE--ALNGCRTIKAACGVW 468

Query: 222 HAAVV-------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           H+A V          G++ TWG G  G LGHG+ EC  +P  V  L+      VA G   
Sbjct: 469 HSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSI 528

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T  +S  G VY+ G  + +              H  V  P  +       E  +  S   
Sbjct: 529 TVALSMSGQVYAMGTADPS--------------HDIVRAPSCI-------EGGLGKSFVQ 567

Query: 335 SIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
            +    H  A L    ++Y +G G  GQLG
Sbjct: 568 EVACGFHHIAVLNSKAEVYTWGKGSNGQLG 597



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 34/286 (11%)

Query: 86  TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 140
           + L+T   L + LK+   + A   + G  +  +++++G++Y  SWG ++  RLGH     
Sbjct: 281 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMY--SWGEESGGRLGHGV--C 336

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              PHP L    N   V++A    +          +  +  G    G LG GS      P
Sbjct: 337 SYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKP 396

Query: 201 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
            R++ Q + + ++   ++ G WH A V  +G++ T+G G +G LGHG+    ++P+ V+A
Sbjct: 397 VRILGQMEGIYVK--AISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA 454

Query: 260 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           LN  + I  A G + +  V       +  G ++++G G+   LGH  I           L
Sbjct: 455 LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDI--------ECRL 506

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            P  VT L   +    Q++   SI     T AL+ SG++YA G  D
Sbjct: 507 IPSCVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTAD 545



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 27/245 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   + G   T  ++  G+++ FG  +FG   +G + +  +  P+ VE+L     
Sbjct: 403 MEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRT 460

Query: 104 VQAAIGNFFTAVL-------SREGRVYTFSWGNDARLGHHTEPNDVEPHPL---LGTLEN 153
           ++AA G + +A +       +  G+++T+  G+D RLGH     D+E   +   +  L+ 
Sbjct: 461 IKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH----GDIECRLIPSCVTELDT 516

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+A G    +AL+   SG  VY++G          S    + P  IE   L     
Sbjct: 517 TSFQQVACGQSITVALSM--SGQ-VYAMG------TADPSHDIVRAPSCIEG-GLGKSFV 566

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             VA G  H AV+     V TWG G  G LGHG+ E   +P +V+AL   +   V  G +
Sbjct: 567 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSN 626

Query: 273 YTTFV 277
           YT  +
Sbjct: 627 YTATI 631



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 20/190 (10%)

Query: 180 SVGCGL--GGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S+G GL  GG    GS     TD   P++++    L+ Q +  + G  +A +V + G++ 
Sbjct: 264 SIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSI--SCGTNYAVLVTKQGQMY 321

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           +WG    G LGHG       PK++   N         G++ T  V+  GD+Y++G G+  
Sbjct: 322 SWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGD-- 379

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
              HNA   G G+  ++    +++  ++ +  + +         W  HT  +T  GKL+ 
Sbjct: 380 ---HNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGP-----W--HTAFVTSEGKLFT 429

Query: 354 FGAGDKGQLG 363
           FG G  G LG
Sbjct: 430 FGDGTFGALG 439


>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
          Length = 494

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +  + +   A  ++LI+  G+++++G
Sbjct: 89  IGRKEVPKQQAAFRNL-GQNLWGPHRYGCLNDVQVSCVVSGPCAAHSLLITTEGKLWSWG 147

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK + +P+L+E L +  VV AA G   T  L+  G VY+F      +
Sbjct: 148 RNEKGQLGHG--DTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDNGSVYSFGENKLGQ 205

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG  ++   V   P L + +  P+V++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 206 LGQCSQTYAVL-SPALISYDGQPLVKVACGAEFSMVVDCKGN---LYSFGCPEYGQLGHN 261

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR I  F       Q++ +  VVV   A GA H  V+    
Sbjct: 262 SDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVVRDVACGANHTLVLDSQK 321

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++++  +     A  + TG   +F V+E+G +  +G
Sbjct: 322 RVFSWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCSFAVTENGSLSFWG 381



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRLEAPKLI 168

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E   L +   V  A G  H   +  +G V ++G  + G LG  ++    +   + + +  
Sbjct: 169 EG--LADHLVVAAACGRNHTLALTDNGSVYSFGENKLGQLGQCSQTYAVLSPALISYDGQ 226

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 319
             + VA G   + VV   G++YSFGC E   LGHN+    IA  Q       + P+ +  
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI 286

Query: 320 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
             + ++    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 287 FIEKSKDGQVMPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 335



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 140/350 (40%), Gaps = 70/350 (20%)

Query: 39  LYCRSLQGIRIIQAAAG---AGRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTS 91
           L C +++G  ++  A      GR  +          G++ +G   YG    VQ + +V+ 
Sbjct: 69  LDCPNIKGQLLVFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSG 128

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P    SL                +++ EG+++++      +LGH  +   +E   L+  L
Sbjct: 129 PCAAHSL----------------LITTEGKLWSWGRNEKGQLGH-GDTKRLEAPKLIEGL 171

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLN 210
            +  VV  A G  + LAL       +VYS G    G+LG  S+T     P LI      +
Sbjct: 172 ADHLVVAAACGRNHTLALT---DNGSVYSFGENKLGQLGQCSQTYAVLSPALIS----YD 224

Query: 211 LQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE------------ECESVPKV- 256
            QP+V VA GA  + VV   G + ++G   YG LGH ++            +CE +P+  
Sbjct: 225 GQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRI 284

Query: 257 -----------VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                      V  + +V    VA G   T V+     V+S+G G    LGH    D   
Sbjct: 285 AIFIEKSKDGQVMPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--- 341

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
                 + P+L+           QI           +FA+TE+G L  +G
Sbjct: 342 -----EMVPRLIKLFDFPGRGASQIYTGYQC-----SFAVTENGSLSFWG 381


>gi|388497640|gb|AFK36886.1| unknown [Lotus japonicus]
          Length = 69

 Score =  103 bits (256), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/67 (76%), Positives = 57/67 (85%), Gaps = 1/67 (1%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF-TAVLSR 118
           MLISD+GQVYAFGKDSFG+AEYGVQG+K V SPQLVESLKNIFVVQAAIGNFF +  + R
Sbjct: 1   MLISDSGQVYAFGKDSFGDAEYGVQGSKTVISPQLVESLKNIFVVQAAIGNFFHSCTVKR 60

Query: 119 EGRVYTF 125
              +Y F
Sbjct: 61  RQGLYIF 67


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 156/360 (43%), Gaps = 42/360 (11%)

Query: 17  PDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 76
           PD +     K + L       P    S   + +     G     L++  G+V+ +G++S 
Sbjct: 53  PDTVIRSTAKADFL------LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESG 106

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLG 134
           G   +G +   +   P+LVESL    V   A G F T  ++  G +YT+  G  N   LG
Sbjct: 107 GRLGHGSREDSV--HPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLG 164

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           + T+ +   P  + G LE   V  ++ G  +    A   S   +++ G G  G LGHG+R
Sbjct: 165 NGTDVSHWIPKRISGVLEGHQVAYVSCGTWHT---ALVTSRGQLFTFGDGTFGVLGHGNR 221

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCL 243
                PR +E   L  L+ + VA G WH A V +            G++ TWG G    L
Sbjct: 222 ESFSCPREVES--LSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRL 279

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GHG++E +  P  V +L D     +A G   T  ++  G V S G         N +   
Sbjct: 280 GHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMG---------NTVYGQ 330

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            GN  ++   P L+  +  + E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 331 LGNPRSDGKLPCLIEDI--MGEHVVQVACG-----SYHVAVLTNKSEVFTWGKGANGRLG 383



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 20/248 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G ++   + G   T L++  GQ++ FG  +FG   +G + +   + P+ VESL  +  
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRES--FSCPREVESLSGLKT 238

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L 
Sbjct: 239 IAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKP-TCVASLI 297

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    SG  V S+G  + G+LG+  R+D K P LIE   ++   
Sbjct: 298 DYDFCRIACGHSLTVGLTT--SGQ-VLSMGNTVYGQLGN-PRSDGKLPCLIED--IMGEH 351

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V VA G++H AV+     V TWG G  G LGHG+ E   +P +V++L D    H+A G 
Sbjct: 352 VVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGS 411

Query: 273 YTTFVVSE 280
             T  + +
Sbjct: 412 NFTSAICQ 419



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +PK +++   +   HV  G     +V+++G+V+++G      LGH +  D         +
Sbjct: 67  LPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDS--------V 118

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P+LV SL   N  +V            HT A+T SG+LY +G G      I L+ N T+
Sbjct: 119 HPRLVESLAICNVDIVACG-------EFHTCAVTTSGELYTWGDGTH---NIGLLGNGTD 168

Query: 373 RGN--PERV 379
             +  P+R+
Sbjct: 169 VSHWIPKRI 177


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 42/341 (12%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---------QLV 95
           Q   +++   G   T+ ++  G++YA G +  G+      G  L T P         + +
Sbjct: 34  QADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQL-----GHDLDTLPNKRPRMSRFKRL 88

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLE 152
            SL+N  +   + G   +  L+  G+V  FSWG++A  +LGH  E N  +P P ++  + 
Sbjct: 89  TSLENYIITCISCGTAHSLALTNWGQV--FSWGSNAVGQLGHDAE-NGRQPTPRMIKAIG 145

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNL 211
              VVQIA+G  + LAL    +   +Y+ G    G+LG G+ +++   P LI+   L  +
Sbjct: 146 AKHVVQIASGQYHCLALT---NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQS--LAGV 200

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A G  H+  V + G +  WG   +G LG  +      P  ++ L  +   +++ G
Sbjct: 201 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 260

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           D  +  ++ +G V++ G G    LGH +         +N + P+ V  L  +  ++ QI+
Sbjct: 261 DDFSVFLTNEGGVFTCGAGTFGQLGHGSC--------SNEIVPRKVFEL--MGSKITQIA 310

Query: 332 LTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQT 371
                    HT A   S GK+Y FG G  GQLGI +V N +
Sbjct: 311 CGRR-----HTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHS 346



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 27/303 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G  + GE   G    + V  P+ ++  +   VV+   G   T  L++EG++Y    
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 128 GNDARLGH--HTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            +  +LGH   T PN    +     L +LEN  +  I+ G  + LAL    +   V+S G
Sbjct: 63  NDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALT---NWGQVFSWG 119

Query: 183 CGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
               G+LGH +    +  PR+I+     ++  V +A+G +H   +  +G +  WG   YG
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHV--VQIASGQYHCLALTNNGELYAWGSNSYG 177

Query: 242 CLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            LG G   E   +P ++Q+L  V    +A G   +F VS+ G ++ +G      LG N +
Sbjct: 178 QLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 237

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                    +   P  + +L+ +  R +      S++       LT  G ++  GAG  G
Sbjct: 238 --------NSRCYPTQLRTLRSLGVRYISCGDDFSVF-------LTNEGGVFTCGAGTFG 282

Query: 361 QLG 363
           QLG
Sbjct: 283 QLG 285



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 12/225 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +++    ++Q A+G    + +++ G++YA+G +S+G+   G    K V  P L++
Sbjct: 137 TPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEK-VPMPTLIQ 195

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  + +   A G   +  +S+ G +  F WG +   +LG +   +   P   L TL ++
Sbjct: 196 SLAGVPIAFIACGGNHSFAVSKSGAI--FGWGKNTFGQLGLNDLNSRCYPTQ-LRTLRSL 252

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  I+ G  + + L  +     V++ G G  G+LGHGS ++E  PR +  F+L+  +  
Sbjct: 253 GVRYISCGDDFSVFLTNEG---GVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKIT 307

Query: 215 VVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            +A G  H  A V   G++  +G G  G LG G     S P++V+
Sbjct: 308 QIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 352


>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
          Length = 522

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 117 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 175

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 176 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQ 233

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 234 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 289

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 290 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 349

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 350 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 197 EG---LSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGS 222

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVLAACGRN-----HTLALTETGSVFAF 226

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 415 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 474

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 475 AQEVKTLDGIFSEQVAMGYSHSLVIARD 502


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G+ +   + G   T LI+ +GQ+Y FG  +FG   +G + +   + P+ VESLK +  
Sbjct: 182 LDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRT 239

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + TA +         +  G+++T+  G+  RLGH    + ++P   + +L + 
Sbjct: 240 ISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCIPSLIDY 298

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              + A G+   + L    +   +++VG  + G+LG+ +  D ++PRL+E+ QL     V
Sbjct: 299 NFHKAACGHTLTIGLT---TSGHIFTVGSSVYGQLGNPN-NDGRYPRLVEE-QLGGGGVV 353

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA G++H AV+   G V TWG G  G LGHG+     VP +V+AL D     VA G   
Sbjct: 354 EVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSF 413

Query: 275 TFVVSE 280
           T  + +
Sbjct: 414 TAAICQ 419



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 146/322 (45%), Gaps = 33/322 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++   +V+ +G++  G   +G  GT  V  P+LVESL    V   A G F 
Sbjct: 84  ACGVKHAALVTRQSEVFTWGEECSGRLGHGT-GTN-VFQPRLVESLSICNVELIACGEFH 141

Query: 113 TAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           T  ++  G +YT+  G  N   LGH +  +   P  + G L+ +PV  ++ G  +   + 
Sbjct: 142 TCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALIT 201

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---- 226
              S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ + V+ G WH A V    
Sbjct: 202 ---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVES--LKGLRTISVSCGVWHTAAVVEVI 256

Query: 227 -----GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
                   G++ TWG G    LGHG+   +  P  + +L D      A G   T  ++  
Sbjct: 257 ISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTS 316

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G +++ G      LG N   DG   R+  ++  QL          VV+++  +      H
Sbjct: 317 GHIFTVGSSVYGQLG-NPNNDG---RYPRLVEEQLGGG------GVVEVACGS-----YH 361

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
              LT +G++Y +G G  G+LG
Sbjct: 362 VAVLTNAGEVYTWGKGANGRLG 383



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 66  GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           G +Y +G        +     + Y    T  V  P+ +ES   + V   A G    A+++
Sbjct: 35  GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R+  V  F+WG +   RLGH T  N  +P  L+ +L    V  IA G  +  A+      
Sbjct: 95  RQSEV--FTWGEECSGRLGHGTGTNVFQPR-LVESLSICNVELIACGEFHTCAVTAT-GD 150

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           +  +  G    G LGHGS      P+ +    L  L    V+ G WH A++   G++ T+
Sbjct: 151 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSTVSCGTWHTALITSSGQLYTF 209

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYS 286
           G G +G LGHGN    S PK V++L  ++ I V+ G + T  V E          G +++
Sbjct: 210 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 269

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G G+   LGH       G+R +  L P  + SL       +  +   +   +  T  LT
Sbjct: 270 WGDGDKYRLGH-------GDRSSK-LKPTCIPSL-------IDYNFHKAACGHTLTIGLT 314

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG ++  G+   GQLG
Sbjct: 315 TSGHIFTVGSSVYGQLG 331


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 147/324 (45%), Gaps = 37/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++   +V+ +G++  G   +G+ GT  V  P+LVESL    V   A G F 
Sbjct: 269 ACGVKHAALVTRQAEVFTWGEECSGRLGHGI-GTN-VFQPRLVESLSTCNVELIACGEFH 326

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +  +   P  + G L+ +PV  ++ G  +   
Sbjct: 327 TCAVTATGDLYT--WGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTAL 384

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-- 226
           +    S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ + V+ G WH A V  
Sbjct: 385 IT---SSGQLYTFGDGTFGVLGHGNRASCSYPKEVES--LKGLRTISVSCGVWHTAAVVE 439

Query: 227 -------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG+   +  P  V +L D      A G   T  ++
Sbjct: 440 VIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLT 499

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G +++ G      LG N   DG   R+  ++  QL          VV+++  +     
Sbjct: 500 TSGHIFTVGSPVYGQLG-NPNNDG---RYPRLVEEQLGGG------GVVEVACGS----- 544

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT +G++Y +G G  G+LG
Sbjct: 545 YHVAVLTNAGEVYTWGKGTNGRLG 568



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G+ +   + G   T LI+ +GQ+Y FG  +FG   +G + +   + P+ VESLK +  
Sbjct: 367 LDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRAS--CSYPKEVESLKGLRT 424

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + TA +         +  G+++T+  G+  RLGH    + ++P   + +L + 
Sbjct: 425 ISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDY 483

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              + A G+   + L    +   +++VG  + G+LG+ +  D ++PRL+E+ QL     V
Sbjct: 484 NFHKAACGHTLTIGLT---TSGHIFTVGSPVYGQLGNPN-NDGRYPRLVEE-QLGGGGVV 538

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA G++H AV+   G V TWG G  G LGHG+     VP +V+AL D     VA G   
Sbjct: 539 EVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSF 598

Query: 275 TFVVSE 280
           T  + +
Sbjct: 599 TAAICQ 604



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 139/317 (43%), Gaps = 39/317 (12%)

Query: 66  GQVYAFG--------KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           G +Y +G        +     + Y    T  V  P+ +ES   + V   A G    A+++
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279

Query: 118 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           R+  V  F+WG +   RLGH    N  +P  L+ +L    V  IA G  +  A+      
Sbjct: 280 RQAEV--FTWGEECSGRLGHGIGTNVFQPR-LVESLSTCNVELIACGEFHTCAVTAT-GD 335

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           +  +  G    G LGHGS      P+ +    L  L    V+ G WH A++   G++ T+
Sbjct: 336 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLDGLPVSAVSCGTWHTALITSSGQLYTF 394

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVYS 286
           G G +G LGHGN    S PK V++L  ++ I V+ G + T  V E          G +++
Sbjct: 395 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 454

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G G+   LGH       G+R +  L P  V SL       +  +   +   +  T  LT
Sbjct: 455 WGDGDKYRLGH-------GDRSSK-LKPTCVPSL-------IDYNFHKAACGHTLTIGLT 499

Query: 347 ESGKLYAFGAGDKGQLG 363
            SG ++  G+   GQLG
Sbjct: 500 TSGHIFTVGSPVYGQLG 516


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 30/326 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           Q A G   T+ ++  GQVYA G +   +      G +L T  P  +  L+   V+Q A G
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQL-----GHELPTKRPLPIPELQAYVVIQIACG 94

Query: 110 NFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  L+  G++   SWG++   ++GH T+ + +E   +L  L +  VVQIA G  + L
Sbjct: 95  SRHSMALTEWGQI--LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           AL    S   +YS G  + G+LG  S  D  H    +    +L +    +A G  H+ ++
Sbjct: 153 ALT---SCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLI 209

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +   V  WG    G LG  +E+  + P  ++++  +    V  GD  +  ++ +G V++
Sbjct: 210 SKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFT 269

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            G G    LGH     G  N   N + P++V  L  +   + Q++  N      HT AL 
Sbjct: 270 CGAGNYGQLGH-----GVSN---NEMIPRMVIEL--MGSTITQVACGNR-----HTLALV 314

Query: 347 ES-GKLYAFGAGDKGQLGIELVNNQT 371
            S G++Y+FG G  GQLG     +QT
Sbjct: 315 PSGGRVYSFGLGASGQLGTRNTISQT 340



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 22/283 (7%)

Query: 24  NGKRNLLGREV-NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           N   + LG E+    PL    LQ   +IQ A G+  +M +++ GQ+ ++G +  G+  + 
Sbjct: 62  NNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHS 121

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPN 140
                ++  P+++  L +  VVQ A GN  +  L+  G +Y  SWG++   +LG  + P 
Sbjct: 122 TDN-DVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELY--SWGSNIYGQLGVQS-PK 177

Query: 141 DVEPH---PL-LGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           D+ PH   PL L T+  IP+  IA G  + +L++        AV+  G    G+LG    
Sbjct: 178 DL-PHSNAPLRLTTILGIPLATIACGGNHSFLIS-----KSSAVFGWGKNTCGQLGLNDE 231

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +  +P  ++  + L ++   V  G  ++  +  +G V T G G YG LGHG    E +P
Sbjct: 232 QNRAYPSQLKSMRTLGVR--FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP 289

Query: 255 KVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGESASLG 296
           ++V  L       VA G+ +T  +V   G VYSFG G S  LG
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 5/166 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL   ++ GI +   A G   + LIS +  V+ +GK++ G+   G+   +    P  ++S
Sbjct: 185 PLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL--GLNDEQNRAYPSQLKS 242

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           ++ + V     G+ ++  L+ EG V+T   GN  +LGH    N++ P  ++  L    + 
Sbjct: 243 MRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVI-ELMGSTIT 301

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           Q+A G  + LAL   PSG  VYS G G  G+LG  +   +  P+++
Sbjct: 302 QVACGNRHTLALV--PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 234
           MA+Y  G    G+LG G   +E+   L  Q +     PV  +A G  H   +  +G+V  
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQ-ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYA 59

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            G   +  LGH  E     P  +  L     I +A G   +  ++E G + S+G  +   
Sbjct: 60  CGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           +GH+   D        +  P+++  L  V+  VVQI+  N+     H+ ALT  G+LY++
Sbjct: 118 VGHSTDNDV-------IELPKILRFL--VSRTVVQIACGNN-----HSLALTSCGELYSW 163

Query: 355 GAGDKGQLGIELVNNQTERGNPERV 379
           G+   GQLG++   +      P R+
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRL 188



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   +    P   +S++ + +     G   ++ +++ G V+  G  ++G+  +GV 
Sbjct: 224 GQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVS 283

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             +++  P++V  L    + Q A GN  T A++   GRVY+F  G   +LG     +   
Sbjct: 284 NNEMI--PRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTL 341

Query: 144 PHPLLG 149
           P  ++G
Sbjct: 342 PKVVIG 347


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 169/338 (50%), Gaps = 30/338 (8%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           G+    G EV+  P     L+ +  I + + G+  +  I+++G +  +G    G+  +G 
Sbjct: 19  GQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGN 78

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH----TEP 139
               LV  P++  SLKN  VVQ A  +  TA +   G +YT+    + +LGH     +  
Sbjct: 79  LEDCLV--PRVNLSLKN--VVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSIS 134

Query: 140 NDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
           N+V   P+ +  LE   V+Q++ G  +     C        + G GL G+LGHG   D  
Sbjct: 135 NNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWGLGLQGRLGHGDTQDIF 191

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+LIE    L ++ +  + G  H A++   G++  +G G +G LG G+ +   +P++++
Sbjct: 192 TPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLE 249

Query: 259 A-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             L D++   V+ G   +  V++ G VY++G G    LGH  I +G      + L+P+ +
Sbjct: 250 GPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IFNGP---EHDFLSPKRL 302

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           ++L++    +V IS  NS     H+ AL++ G +Y +G
Sbjct: 303 SNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 28/309 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG-----KDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++Q A     T  I   G++Y +G     K   G+ E  +    +V+ P  V++L+   V
Sbjct: 94  VVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKV 152

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           +Q + G++ T  L+ + +  T+  G   RLGH  +  D+    L+ +L  +P+ +I+ G 
Sbjct: 153 IQVSCGSYHTGCLTDDKKALTWGLGLQGRLGH-GDTQDIFTPKLIESLAGLPIKEISCGG 211

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +   L        +Y  G G  GKLG GS  D   PRL+E   L ++Q   V+ G+ H+
Sbjct: 212 HHTAILLVTGK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHS 267

Query: 224 AVVGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           A V + G+V TWG G R G + +G E     PK +  L     + ++ G+  +  +S+ G
Sbjct: 268 AAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG 327

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           D+Y++G   + ++GH     G    H N+ +   +      N+ +VQ+  ++S     H+
Sbjct: 328 DIYTWGM--TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HS 371

Query: 343 FALTESGKL 351
            AL++ G L
Sbjct: 372 IALSDIGAL 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 30/296 (10%)

Query: 76  FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 131
           +G +EYG  G+K   +   P LV+ L+++  + + + G+ ++A ++  G +  + +G   
Sbjct: 13  WGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           +LG     + + P   L +L+N  VVQ+A   C     A   S   +Y+ GC   GKLGH
Sbjct: 73  QLGFGNLEDCLVPRVNL-SLKN--VVQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126

Query: 192 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           G         ++ Q    + L  + V+ V+ G++H   +  D +  TWG G  G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            +    PK++++L  +    ++ G + T ++   G +Y FG G    LG  +  D     
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              VL P+L+         +  I +T     + H+ A+T+ GK+Y +G G  G+LG
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLG 286



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 14/212 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  ++L+G ++IQ + G+  T  ++D  +   +G    G   +G   T+ + +P+L+ES
Sbjct: 141 PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHG--DTQDIFTPKLIES 198

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  + + + + G   TA+L   G++Y F  G   +LG  +  + + P  L G LE+I + 
Sbjct: 199 LAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQIT 258

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQPV 214
           +++ G  +  + A    G  VY+   G GG+LGH   G   D   P+ +   +   +  V
Sbjct: 259 KVSLGSQH--SAAVTKCG-KVYT--WGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFI--V 311

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
            ++ G  H+  +   G + TWG  +   +GHG
Sbjct: 312 DISCGNSHSVALSDVGDIYTWGMTKN--IGHG 341



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 290
           V  WG   YG  G   EE    P +V  L  + +I  V+ G   +  ++  GD+  +G G
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
               LG   + D         L P++  SLK     VVQ++ ++      HT A+  +G+
Sbjct: 70  GCGQLGFGNLED--------CLVPRVNLSLKN----VVQVACSDR-----HTAAILSNGE 112

Query: 351 LYAFGAGDKGQLG 363
           LY +G    G+LG
Sbjct: 113 LYTWGCSKNGKLG 125


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 152/345 (44%), Gaps = 46/345 (13%)

Query: 39  LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           L+ ++L+   ++     A G     L++  G+V+++G++S G   +GV     V  P+L+
Sbjct: 298 LFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD--VLHPKLI 355

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTL 151
           E+L N  +   A G + +  ++  G +YT  WGN       LGH  + +   P  + G L
Sbjct: 356 EALSNTNIELVACGEYHSCAVTLSGDLYT--WGNGTYNYGLLGHGNQVSHWVPKRVNGPL 413

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E I V  I+ G  +   +    S   +++ G G  G LGHG R     PR +E   L  L
Sbjct: 414 EGIHVSYISCGPWHTAVVT---SAGQLFTFGDGTFGALGHGDRKSVSLPREVE--SLKGL 468

Query: 212 QPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           + V  A G WH A V +               + TWG G  G LGH ++E + VP  V A
Sbjct: 469 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-A 527

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L +     VA G   T  ++  G VY+ G      LG N  ADG+         P LV  
Sbjct: 528 LAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG-NPQADGK--------LPILV-- 576

Query: 320 LKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                E  +  S    I   A H   LT   ++Y +G G  G+LG
Sbjct: 577 -----EGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 23/248 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G +  K V+ P+ VESLK +  
Sbjct: 413 LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRT 470

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +          S    V  F+WG+    RLGH  +   + P  +    
Sbjct: 471 VRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAE 530

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            N  V Q+A G+   +AL    +   VY++G  + G+LG+  + D K P L+E  +L   
Sbjct: 531 HN--VCQVACGHSLTVALT---TSGRVYTMGSPVYGQLGN-PQADGKLPILVEG-KLSES 583

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A GA+H AV+     V TWG G  G LGHG+ +  + P +V+AL D     +A G
Sbjct: 584 FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACG 643

Query: 272 DYTTFVVS 279
             TTF  +
Sbjct: 644 --TTFTAA 649



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 20/185 (10%)

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + VG  LG K+      D   P+ +E   +L++Q +  A G  HAA+V + G V +WG  
Sbjct: 285 HRVGSCLGAKM------DSLFPKALESAVVLDVQNI--ACGGRHAALVTKQGEVFSWGEE 336

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LGHG +     PK+++AL++     VA G+Y +  V+  GD+Y++G G      +N
Sbjct: 337 SGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGT-----YN 391

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
               G GN+ ++ +  ++   L+ ++     +S  +   W  HT  +T +G+L+ FG G 
Sbjct: 392 YGLLGHGNQVSHWVPKRVNGPLEGIH-----VSYISCGPW--HTAVVTSAGQLFTFGDGT 444

Query: 359 KGQLG 363
            G LG
Sbjct: 445 FGALG 449


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 153/320 (47%), Gaps = 34/320 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIG 109
           Q A G   T+ ++ +G+VYA G +     +Y   G +L T  P  +  L++  + Q A G
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSN-----DYSQLGHELPTKRPLQIPELEDYVITQIACG 94

Query: 110 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +  +  L+  G+V   SWG++   +LGH ++ + ++   ++  L +  VVQIA G  + L
Sbjct: 95  SRHSMALTEWGQV--LSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSL 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVV 226
           AL C      +YS G  + G+LG  S ++       +    LL +    +A G  H  ++
Sbjct: 153 ALTC---CGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLI 209

Query: 227 GQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            +   V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V
Sbjct: 210 SKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           ++ G G    LGH           +N + P++V  L  +   + Q++  N      HT A
Sbjct: 268 FTCGAGAYGQLGHGF--------SSNEMLPRMVMEL--MGSTISQVACGNR-----HTLA 312

Query: 345 LTES-GKLYAFGAGDKGQLG 363
           L  S G++Y FG G  GQLG
Sbjct: 313 LVPSRGRIYGFGLGSSGQLG 332



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           ++V   P   R L    ++Q A G   ++ ++  G++Y++G + +G+   GV+    ++ 
Sbjct: 124 QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQL--GVKSPSELSQ 181

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              P  + +L  I     A G   T ++S+   V+ +   N  +LG + E N   P   L
Sbjct: 182 CNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-L 240

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG  ++E  PR++   +L
Sbjct: 241 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFSSNEMLPRMV--MEL 295

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GR+  +G G  G LG  N +  ++P+VV
Sbjct: 296 MGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 24/208 (11%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 231
           M +Y  G    G+LG G   DE+    I     +  +P      VA G  H   +   G+
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQ----ILTPSQIPWKPDSAVNQVACGHRHTLFLTASGK 56

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  E     P  +  L D     +A G   +  ++E G V S+G  E
Sbjct: 57  VYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNE 114

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH +  D        +  P++V  L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 115 CGQLGHASDQDV-------IQLPKIVRYL--VSKTVVQIACGNN-----HSLALTCCGEL 160

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERV 379
           Y++G+   GQLG++  +  ++   P R+
Sbjct: 161 YSWGSNIYGQLGVKSPSELSQCNYPMRL 188



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    ++
Sbjct: 228 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEM 287

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GR+Y F  G+  +LG     +   P  +
Sbjct: 288 L--PRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345

Query: 148 LG 149
           +G
Sbjct: 346 IG 347


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 39/357 (10%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEA 79
           R G   ++   V    L  + L+   ++ A     G   + L++  G+V+ +G++S G  
Sbjct: 50  RTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRL 109

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHT 137
            +G +   +   P+L+ESL    V   A G F T  ++  G +YT+  G  N   LGH  
Sbjct: 110 GHGSREDSI--HPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGK 167

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
           + +   P  + G LE + V  ++ G  +   +        +++ G G  G LGHG+R   
Sbjct: 168 DVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQ---LFTFGDGTFGVLGHGNRESI 224

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHG 246
             P+ +E   L  L+ + VA G WH A + +            G++ TWG G    LGHG
Sbjct: 225 SCPKEVES--LSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHG 282

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           ++E    P  V +L D     +A G   T  ++  G V S G         N +    GN
Sbjct: 283 DKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMG---------NTVYGQLGN 333

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             ++   P LV  +  V E VVQ++       + H   LT   +++ +G G  G+LG
Sbjct: 334 PRSDGKIPCLVEEI--VGENVVQVACG-----SYHVAVLTIKSEVFTWGKGANGRLG 383



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 20/249 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G+ +   + G   T LI+  GQ++ FG  +FG   +G +  + ++ P+ VESL  + 
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR--ESISCPKEVESLSGLK 237

Query: 103 VVQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L
Sbjct: 238 TISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+   + L    +   V S+G  + G+LG+  R+D K P L+E+    N+
Sbjct: 297 IDYDFHRIACGHSLTVGLT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV 352

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V VA G++H AV+     V TWG G  G LGHG+ E   +P +V+AL D    H+A G
Sbjct: 353 --VQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACG 410

Query: 272 DYTTFVVSE 280
              T  + +
Sbjct: 411 ANFTAAICQ 419


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 32/342 (9%)

Query: 36   GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
             TP+   SL+   I+  + G   T++I  +  +Y++G   +G+  +GV     +  P+ +
Sbjct: 1237 STPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNL--PKRI 1294

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            E      +   A G + T VL   G ++ F      +LG     ND++ H  + T  N  
Sbjct: 1295 EEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGL----NDLKHHLPIPTRVNTA 1350

Query: 156  VVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
             +  A     +  + C       + S   VYS G    G+LGHGS    ++P+LI+  + 
Sbjct: 1351 DIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKG 1410

Query: 209  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
             N++   +  G +H  V      V  WG G + CLG G+ + E VPK+V+   + +   V
Sbjct: 1411 KNIKR--ITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERV 1468

Query: 269  ATGDYTTFVVSED-------GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
              G Y T  +++        G+VY  G  E   LG   I     +   +   P ++ S+ 
Sbjct: 1469 VCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLG---IGGDPRSPSLDKAYPAIIPSIN 1525

Query: 322  QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              N     + L +   +NA    +T +G LY +GAG  GQ+G
Sbjct: 1526 SANV----VDLASGAEFNA---LITSNGALYMWGAGTHGQIG 1560



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)

Query: 178  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWG 236
            +++ G    G+LGHG     KH     + + L   P+++ + G  H  V+ +   + +WG
Sbjct: 1215 LFTWGNNTSGQLGHGLAAG-KHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWG 1273

Query: 237  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             G+YG LGHG     ++PK ++     K   +ATG + T V+   GD+++FG  E   LG
Sbjct: 1274 NGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLG 1333

Query: 297  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             N +      +H   +  ++ T+   ++       +T     ++H+   T  G +Y+FGA
Sbjct: 1334 LNDL------KHHLPIPTRVNTA--DIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGA 1385

Query: 357  GDKGQLG 363
              KGQLG
Sbjct: 1386 NAKGQLG 1392



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 19/152 (12%)

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDY 273
            V+ G  HAAV+  DG + TWG    G LGHG    + +S P  V++L     + ++ G  
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ-ISL 332
             T V+     +YS+G G+   LGH             V TP  +   K++ E   Q IS 
Sbjct: 1259 HTVVIDRSFHIYSWGNGKYGQLGH------------GVSTPHNLP--KRIEEFAGQKISS 1304

Query: 333  TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              + YW  HT  L   G L+AFG+ + GQLG+
Sbjct: 1305 IATGYW--HTLVLRSGGDLFAFGSNEHGQLGL 1334



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 254  PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
            P      N+  A  V+ G     V++ DG+++++G   S  LGH  +A G   +H +  T
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGH-GLAAG---KHQS--T 1238

Query: 314  PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            P  V SLKQ    ++ +SL        HT  +  S  +Y++G G  GQLG
Sbjct: 1239 PMRVESLKQT--PIMMMSLGGE-----HTVVIDRSFHIYSWGNGKYGQLG 1281


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 13/258 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNI 101
           +L    I+  + G   T+ ++D GQVYA+G D+ G+   G+ GT+  +  P+ ++SL +I
Sbjct: 29  ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQL--GLPGTEECIRVPRNIKSLSDI 86

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            +VQ + G + +  LS+   V  FSWG +   +LG   E        L+ +L  IP +QI
Sbjct: 87  QIVQVSCGYYHSLALSKGSEV--FSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQI 144

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           AAG  +   L    SG A++  G    G+LG     D   P L++   L + + V +  G
Sbjct: 145 AAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCG 199

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV 278
             H A + ++G V T+G G YG LGH +   E  P+ V  L       VA G  +T+  V
Sbjct: 200 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 259

Query: 279 SEDGDVYSFGCGESASLG 296
              G +YSFG G +  LG
Sbjct: 260 PSSGRIYSFGLGGNGQLG 277



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 26/279 (9%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +V  + G+  T  L+ +G+VY +    D +LG       +     + +L +I +VQ++ G
Sbjct: 35  IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAW 221
           Y + LAL+    G  V+S G    G+LG G    ++  P+LI+   LL +  + +AAG  
Sbjct: 95  YYHSLALS---KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS--LLGIPFMQIAAGGA 149

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +++  G+  T  ++++
Sbjct: 150 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 209

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V++FG G    LGHN+ +     R    L   +VT +    +               H
Sbjct: 210 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------H 254

Query: 342 TFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
           T A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 255 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 12/224 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL  I+I+Q + G   ++ +S   +V+++G++ +G+   G +  K  TSPQL++S
Sbjct: 77  PRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKK-QTSPQLIKS 135

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  I  +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L +  
Sbjct: 136 LLGIPFMQIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQK 192

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +V I  G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      
Sbjct: 193 IVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQ 247

Query: 216 VAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           VA G  H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 248 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L++
Sbjct: 129 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 186

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I V
Sbjct: 187 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 245

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            Q+A G  +  A    PS   +YS G G  G+LG GS ++ K P
Sbjct: 246 TQVACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSP 287


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G++I   AAG   T+++SD GQV+ +G    G+   G +  ++V+SP ++  + +  +VQ
Sbjct: 10  GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 68

Query: 106 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
                               A G   +AV++  G V  F WG   + G  +  +++ P  
Sbjct: 69  GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSP-T 127

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L  I +  +AAG   L    C  +   VY+ G    G+LG GS   E  PRL++  
Sbjct: 128 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 184

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L N+    ++ GA H A+V  +G+V +WGW +YG LG G+    ++P  V A+    A 
Sbjct: 185 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 243

Query: 267 HVATGDYTTFVVSE 280
           +VA G + T +++E
Sbjct: 244 NVACGWWHTLLLAE 257



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 58/293 (19%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P LV     + +   A G   T VLS  G+V+ + +G + +LG  +    V    ++  +
Sbjct: 2   PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           ++  +VQ                                 GS + E H      F++   
Sbjct: 62  DSSSLVQ---------------------------------GSMSSEGH-----NFRIPGS 83

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A G  H+AV+   G V  +GWG YG  G G+ + E  P  V +L  ++   VA G
Sbjct: 84  CIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAAG 143

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT--SLKQVNERVVQ 329
            + T   S DGDVY+FG  +   L       G G+  A  L P+L+   SL+ VN + + 
Sbjct: 144 LWHTVCTSADGDVYAFGGNQFGQL-------GTGSDQAETL-PRLLDCPSLENVNVKTIS 195

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
                      HT  +T++GK++++G    GQLG+    +  +R  P  V I+
Sbjct: 196 CGAR-------HTALVTDNGKVFSWGWNKYGQLGL---GDVIDRNIPSEVAIE 238



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I   AAG   T+  S  G VYAFG + FG  + G    +  T P+L++
Sbjct: 125 SPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLD 182

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL+N+ V   + G   TA+++  G+V+++ W    +LG     +   P  +   +E  
Sbjct: 183 CPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGC 240

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 241 IAKNVACGWWHTLLLAESPT 260


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 169/338 (50%), Gaps = 30/338 (8%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           G+    G EV+  P     L+ +  I + + G+  +  I+++G +  +G    G+  +G 
Sbjct: 19  GQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGN 78

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH----TEP 139
               LV  P++  SLKN  V+Q A  +  TA +   G +YT+    + +LGH     +  
Sbjct: 79  LEDCLV--PRVNLSLKN--VIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSIS 134

Query: 140 NDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
           N+V   P+ +  LE   V+Q++ G  +     C        + G GL G+LGHG   D  
Sbjct: 135 NNVVSQPMKVKALEGEKVIQVSCGSYHT---GCLTDDKKALTWGLGLQGRLGHGDTQDIF 191

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+LIE    L ++ +  + G  H A++   G++  +G G +G LG G+ +   +P++++
Sbjct: 192 TPKLIESLAGLPIKEI--SCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLE 249

Query: 259 A-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             L D++   V+ G   +  V++ G VY++G G    LGH  I +G      + L+P+ +
Sbjct: 250 GPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGH--IFNGP---EHDFLSPKRL 302

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           ++L++    +V IS  NS     H+ AL++ G +Y +G
Sbjct: 303 SNLEKA--FIVDISCGNS-----HSVALSDVGDIYTWG 333



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 28/309 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG-----KDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +IQ A     T  I   G++Y +G     K   G+ E  +    +V+ P  V++L+   V
Sbjct: 94  VIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSIS-NNVVSQPMKVKALEGEKV 152

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           +Q + G++ T  L+ + +  T+  G   RLGH  +  D+    L+ +L  +P+ +I+ G 
Sbjct: 153 IQVSCGSYHTGCLTDDKKALTWGLGLQGRLGH-GDTQDIFTPKLIESLAGLPIKEISCGG 211

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +   L        +Y  G G  GKLG GS  D   PRL+E   L ++Q   V+ G+ H+
Sbjct: 212 HHTAILLVTGK---LYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHS 267

Query: 224 AVVGQDGRVCTWGWG-RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           A V + G+V TWG G R G + +G E     PK +  L     + ++ G+  +  +S+ G
Sbjct: 268 AAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG 327

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           D+Y++G   + ++GH     G    H N+ +   +      N+ +VQ+  ++S     H+
Sbjct: 328 DIYTWGM--TKNIGH-----GIQGIHPNMPSKHPILQ----NKNIVQVVCSSS-----HS 371

Query: 343 FALTESGKL 351
            AL++ G L
Sbjct: 372 IALSDIGAL 380



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 30/296 (10%)

Query: 76  FGEAEYGVQGTK---LVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA 131
           +G  EYG  G+K   +   P LV+ L+++  + + + G+ ++A ++  G +  + +G   
Sbjct: 13  WGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCG 72

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           +LG     + + P   L +L+N  V+Q+A   C     A   S   +Y+ GC   GKLGH
Sbjct: 73  QLGFGNLEDCLVPRVNL-SLKN--VIQVA---CSDRHTAAILSNGELYTWGCSKNGKLGH 126

Query: 192 GSRTDEKHPRLIEQ---FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           G         ++ Q    + L  + V+ V+ G++H   +  D +  TWG G  G LGHG+
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD 186

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            +    PK++++L  +    ++ G + T ++   G +Y FG G    LG  +  D     
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDD----- 241

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              VL P+L+         +  I +T     + H+ A+T+ GK+Y +G G  G+LG
Sbjct: 242 ---VLIPRLLEG------PLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLG 286



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 24/298 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  ++L+G ++IQ + G+  T  ++D  +   +G    G   +G   T+ + +P+L+ES
Sbjct: 141 PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHG--DTQDIFTPKLIES 198

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  + + + + G   TA+L   G++Y F  G   +LG  +  + + P  L G LE+I + 
Sbjct: 199 LAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQIT 258

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQP- 213
           +++ G  +  + A    G  VY+   G GG+LGH   G   D   P+     +L NL+  
Sbjct: 259 KVSLGSQH--SAAVTKCG-KVYT--WGQGGRLGHIFNGPEHDFLSPK-----RLSNLEKA 308

Query: 214 --VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVAT 270
             V ++ G  H+  +   G + TWG  +   +GHG +    ++P     L +   + V  
Sbjct: 309 FIVDISCGNSHSVALSDVGDIYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVC 366

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
               +  +S   D+ +     S +    ++A+ Q  + A+    +  T L  +  R +
Sbjct: 367 SSSHSIALS---DIGALVQKSSETRKPQSLAEDQEPKKADQSIEEFKTGLDSLIRRKI 421



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCG 290
           V  WG   YG  G   EE    P +V  L  + +I  V+ G   +  ++  GD+  +G G
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
               LG   + D         L P++  SLK     V+Q++ ++      HT A+  +G+
Sbjct: 70  GCGQLGFGNLED--------CLVPRVNLSLKN----VIQVACSDR-----HTAAILSNGE 112

Query: 351 LYAFGAGDKGQLG 363
           LY +G    G+LG
Sbjct: 113 LYTWGCSKNGKLG 125


>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
 gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
          Length = 402

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 32/294 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + + + A  ++LI+  G+++++G
Sbjct: 115 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 173

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+LVE L +  +V AA G   T  L+  G V+ F      +
Sbjct: 174 RNEKGQLGHG--DTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 231

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 232 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 287

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 288 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 347

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDG 282
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVG 401



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRL+
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLV 194

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 195 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 251 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 34/214 (15%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGS 220

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 273

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           A G   T V+     V+S+G G    LGH    D
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 367



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH             V  P+LV  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 180 LGHGDTK--------RVEAPRLVEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 224

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239


>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
          Length = 453

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 48  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 106

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L++ L +  +V AA G   T  L+  G V+ F      +
Sbjct: 107 RNEKGQLGHG--DTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQ 164

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 165 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 220

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  ++    
Sbjct: 221 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLILDSQK 280

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 281 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 340



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 70  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 127

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           +    L+ + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 128 DG---LSHEVIVLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 183

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 184 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 243

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 244 AIFIEKTKDGQILPVPNVVVRDVACGANHTLILDSQKRVFSWGFGGYGRLG 294



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 95  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTETGS 153

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 154 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 206

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 207 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 266

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T ++     V+S+G G    LGH    D         + P+LV           
Sbjct: 267 ACGANHTLILDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 318

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 319 QIYAGYTC-----SFAVSEVGGLFFWGA 341



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 68  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 112

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 113 LGH-----GDTKR---VEAPRLIDGLS--HEVIVLAACGRN-----HTLALTETGSVFAF 157

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 158 GENKMGQLGL---GNQTD 172



 Score = 40.8 bits (94), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 346 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 405

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 406 AQEVKTLDGIFSEQVAMGYSHSLVIARD 433


>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 464

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 25/254 (9%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G++I   AAG   T+++SD GQV+ +G    G+   G +  ++V+SP ++  + +  +VQ
Sbjct: 214 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSR-VRMVSSPHIIPCIDSSSLVQ 272

Query: 106 A-------------------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
                               A G   +AV++  G V  F WG   + G  +  +++ P  
Sbjct: 273 GSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPT- 331

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            + +L  I +  +AAG   L    C  +   VY+ G    G+LG GS   E  PRL++  
Sbjct: 332 CVSSLLGIQIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCP 388

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L N+    ++ GA H A+V  +G+V +WGW +YG LG G+    ++P  V A+    A 
Sbjct: 389 SLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV-AIEGCIAK 447

Query: 267 HVATGDYTTFVVSE 280
           +VA G + T +++E
Sbjct: 448 NVACGWWHTLLLAE 461



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 153/367 (41%), Gaps = 53/367 (14%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLV---TSPQLVE 96
           + I++AA+     +  +D G+VY +G          FGE   GV   K      S  L E
Sbjct: 98  VSIVKAASAWAHCVAATDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTE 157

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIP 155
            + +   V  + G   ++      R    S    A     +  + +   P L TL   + 
Sbjct: 158 QVSSRSQVSKSTGGTVSSGEESSKRRKVSS-AKQAAQTSSSGDDILTAMPCLVTLNPGVK 216

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI----------- 203
           +  +AAG  + L L+       V+  G G  G+LG GSR      P +I           
Sbjct: 217 ITSVAAGGRHTLVLS---DIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSSLVQG 273

Query: 204 ------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
                   F++       +A G  H+AV+   G V  +GWG YG  G G+ + E  P  V
Sbjct: 274 SMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCV 333

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
            +L  ++   VA G + T   S DGDVY+FG  +   L       G G+  A  L P+L+
Sbjct: 334 SSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQL-------GTGSDQAETL-PRLL 385

Query: 318 T--SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
              SL+ VN + +            HT  +T++GK++++G    GQLG+    +  +R  
Sbjct: 386 DCPSLENVNVKTISCGAR-------HTALVTDNGKVFSWGWNKYGQLGL---GDVIDRNI 435

Query: 376 PERVDID 382
           P  V I+
Sbjct: 436 PSEVAIE 442



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I   AAG   T+  S  G VYAFG + FG  + G    +  T P+L++
Sbjct: 329 SPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFG--QLGTGSDQAETLPRLLD 386

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL+N+ V   + G   TA+++  G+V+++ W    +LG     +   P  +   +E  
Sbjct: 387 CPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEV--AIEGC 444

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 445 IAKNVACGWWHTLLLAESPT 464



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 21/186 (11%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGN 247
           LG    T  KH    E F L N   +V AA AW   V   D G V TWGW          
Sbjct: 75  LGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGW---------- 124

Query: 248 EECESVPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA---- 299
           +EC    KV     Q ++  K        + T  VS    V S   G + S G  +    
Sbjct: 125 KECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQV-SKSTGGTVSSGEESSKRR 183

Query: 300 -IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            ++  +     +     ++T++  +      + +T+      HT  L++ G+++ +G G 
Sbjct: 184 KVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGG 243

Query: 359 KGQLGI 364
           +GQLG+
Sbjct: 244 EGQLGL 249


>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
          Length = 427

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V A  G   T  L+  G V+ F      +
Sbjct: 81  RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVLATCGRNHTLALTETGSVFAFGENKMGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 195 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 254

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 255 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 314



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 44  PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 101

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V+A  G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 102 EG---LSHEVIVLATCGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYN 157

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 158 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 217

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 218 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 268



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V    G  + LAL    S
Sbjct: 69  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVLATCGRNHTLALTETGS 127

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 128 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 240

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 241 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 292

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 293 QIYAGYTC-----SFAVSEVGGLFFWGA 315



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 42  WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 86

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 87  LGH-----GDTKR---VEAPRLIEGLS--HEVIVLATCGRN-----HTLALTETGSVFAF 131

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 132 GENKMGQLGL---GNQTD 146



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 320 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 379

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 380 AQEVKTLDGIFSEQVAMGYSHSLVIARD 407


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 20/240 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T L++ AGQ++ FG  SFG   +G + +  ++ P+ VESLK +  
Sbjct: 287 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRT 344

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           V+AA G + TA +               G+++T+  G+  RLGH  +   + P  +   +
Sbjct: 345 VRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALV 404

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           E     Q+A G+C  +AL    +   VY++G  + G+LG+ ++ D   P  +E     N 
Sbjct: 405 EP-NFCQVACGHCLTVALT---TSGHVYTMGSAVYGQLGN-AQADGMLPVRVEGKLYKNF 459

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + + GA+H AV+     V TWG G  G LGHG+ E ++ P +V+AL D +  +V  G
Sbjct: 460 VEEI-SCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCG 518



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 128/287 (44%), Gaps = 38/287 (13%)

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA----RLGHHTEPNDVEPHPLL 148
           +L+++L ++ +   A G + T  ++  G +YT  WG+       LGH  + +   P  + 
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYT--WGDGTFKFGLLGHGNDVSHWVPKHVN 284

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           G LE I V  I+ G  +    A   S   +++ G G  G LGHG R     PR +E  + 
Sbjct: 285 GPLEGIHVSSISCGPWHT---ALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLK- 340

Query: 209 LNLQPVVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKV 256
             L+ V  A G WH A V +             G++ TWG G  G LGHG++E + VP  
Sbjct: 341 -GLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTC 399

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V AL +     VA G   T  ++  G VY+ G      LG NA ADG        + P  
Sbjct: 400 VAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG-NAQADG--------MLPVR 450

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V   K     V +IS     Y   H   LT   ++Y +G G  G+LG
Sbjct: 451 VEG-KLYKNFVEEISC--GAY---HVAVLTSRTEVYTWGKGANGRLG 491



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 32/206 (15%)

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G LGHG+      P+ +    L  +    ++ G WH A+V   G++ T+G G +G LGHG
Sbjct: 267 GLLGHGNDVSHWVPKHVNG-PLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 325

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESAS 294
           + E  SVP+ V++L  ++ +  A G + T  V E             G ++++G G+   
Sbjct: 326 DRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGR 385

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH       G++    L P  V +L + N    Q++  + +     T ALT SG +Y  
Sbjct: 386 LGH-------GDKEPK-LVPTCVAALVEPN--FCQVACGHCL-----TVALTTSGHVYTM 430

Query: 355 GAGDKGQLGIELVNNQTERGNPERVD 380
           G+   GQLG    N Q +   P RV+
Sbjct: 431 GSAVYGQLG----NAQADGMLPVRVE 452


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 128/252 (50%), Gaps = 16/252 (6%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           GAG    ++D G VY +G+  +G+  +G    K++  PQ V  +K   V   + G + T 
Sbjct: 281 GAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKII--PQPVPRIKG-EVKSVSAGFYHTV 337

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQP 173
            ++  G ++T+  G + +LGH+     + P  +   +E  +PV    AG  + L L  + 
Sbjct: 338 AVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRG 397

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
               V+S G G  G+LGHG+  D+  P  +   +  + + V +AAG  H+  +   G++ 
Sbjct: 398 Q---VFSFGSGDSGRLGHGNDNDQWSPTFLSALE--SERCVSIAAGFAHSVALTDQGQIY 452

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           TWG G+ G LGHG++  E +P+ +  +  + +KAI VA G+  T +   +G + + G   
Sbjct: 453 TWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG--- 509

Query: 292 SASLGHNAIADG 303
              + H  +A+G
Sbjct: 510 --RVSHGRMAEG 519



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQA 106
           +   +AG   T+ ++  G ++ +G    G+  +     +L+  P LV +     + V  A
Sbjct: 326 VKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWGMPVAAA 383

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
             G   T VL+R G+V++F  G+  RLGH  + ND      L  LE+   V IAAG+ + 
Sbjct: 384 QAGGSHTLVLNRRGQVFSFGSGDSGRLGHGND-NDQWSPTFLSALESERCVSIAAGFAHS 442

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           +AL  Q     +Y+ GCG  G+LGHGS +DE  PR +       ++ + VAAG  H  + 
Sbjct: 443 VALTDQGQ---IYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIF 499

Query: 227 GQDGRVCTWGWGRYGCLGHGN 247
             +G + T G   +G +  G+
Sbjct: 500 RSEGSLITLGRVSHGRMAEGS 520



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+ +     + G    A ++  G VYT+  G   +LGH  + + + P P+        V 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE--VK 327

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            ++AG+ + +A+       A+++ G G  GKLGH        P L+  F    +      
Sbjct: 328 SVSAGFYHTVAVTHH---GALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQ 384

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H  V+ + G+V ++G G  G LGHGN+  +  P  + AL   + + +A G   +  
Sbjct: 385 AGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVA 444

Query: 278 VSEDGDVYSFGCGESASLGHNAIAD 302
           +++ G +Y++GCG+   LGH + +D
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSD 469



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 25/209 (11%)

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           +   AG+C     A   +G+ VY+ G G  G+LGHG   D+  P+ + +   +  +   V
Sbjct: 278 LSFGAGHC----AAVTDTGL-VYTWGQGRYGQLGHGDDVDKIIPQPVPR---IKGEVKSV 329

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYT 274
           +AG +H   V   G + TWG G+ G LGH +     +P +V A  +  +       G   
Sbjct: 330 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSH 389

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T V++  G V+SFG G+S  LGH     G  N   +  +P  +++L+  +ER V I+   
Sbjct: 390 TLVLNRRGQVFSFGSGDSGRLGH-----GNDN---DQWSPTFLSALE--SERCVSIAAGF 439

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                AH+ ALT+ G++Y +G G  G+LG
Sbjct: 440 -----AHSVALTDQGQIYTWGCGKLGRLG 463



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 19/164 (11%)

Query: 211 LQPVVVAA---GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAI 266
           L+ VV +A   GA H A V   G V TWG GRYG LGHG++  + +P+ V  +  +VK+ 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKS- 328

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            V+ G Y T  V+  G ++++G G+   LGHN         +A  L P LV +  +    
Sbjct: 329 -VSAGFYHTVAVTHHGALFTWGDGKEGKLGHN--------DNAQRLIPTLVAAFIEWGMP 379

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           V       S     HT  L   G++++FG+GD G+LG    N+Q
Sbjct: 380 VAAAQAGGS-----HTLVLNRRGQVFSFGSGDSGRLGHGNDNDQ 418



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G+ +  A AG   T++++  GQV++FG    G   +G    +   SP  + +L++   V 
Sbjct: 377 GMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQW--SPTFLSALESERCVS 434

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 164
            A G   +  L+ +G++YT+  G   RLGH ++ ++V P  L L + + I  + +AAG  
Sbjct: 435 IAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEA 494

Query: 165 Y 165
           +
Sbjct: 495 H 495



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 46/106 (43%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P +  +L+  R +  AAG   ++ ++D GQ+Y +G    G   +G    +++     + 
Sbjct: 420 SPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALI 479

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
           S   I  +  A G   T +   EG + T    +  R+   +   D+
Sbjct: 480 SHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQDM 525


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 144/324 (44%), Gaps = 37/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++   +V+ +G++  G   +G  GT +   P+LVESL    V   A G F 
Sbjct: 292 ACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVESLSICNVETIACGEFH 349

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +  +   P  + G LE +   Q++A  C    
Sbjct: 350 TCAITATGDLYT--WGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL---QVSAVSCGTWH 404

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ + V+ G WH A V +
Sbjct: 405 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRTISVSCGVWHTAAVVE 462

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG+   +  P  V +L D        G   T  ++
Sbjct: 463 VIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 522

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G +++ G      LG N   DG+         P+LV       E++    +   +   
Sbjct: 523 TSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLV------EEKLGGGGVVEVVCGA 567

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT+SG++Y +G G  G+LG
Sbjct: 568 YHVAVLTQSGEVYTWGKGANGRLG 591



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           Y       +  P+ +ES   + V   A G    A+++R+  V+T  WG +   RLGH   
Sbjct: 266 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFT--WGEECSGRLGHGAG 323

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +  +P  L+ +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 324 TSIFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHW 381

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+ +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V+
Sbjct: 382 IPKRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 440

Query: 259 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 309
           +L  ++ I V+ G + T  V E          G ++++G G+   LGH       G+R +
Sbjct: 441 SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-S 492

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + L P  V SL       +  +   ++  +  T  LT SG ++  G+   GQLG
Sbjct: 493 SKLKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 539



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 17/250 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   + G   T LI+ +G++Y FG  +FG   +G + T  ++ P+ VESLK +  
Sbjct: 390 LEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRT 447

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + TA +         +  G+++T+  G+  RLGH    + ++P   + +L + 
Sbjct: 448 ISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDY 506

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              +   G+   + L    SG  +++ G  + G+LG+ +  D ++PRL+E+ +L     V
Sbjct: 507 NFHKAVCGHTLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVV 561

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            V  GA+H AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G   
Sbjct: 562 EVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGF 621

Query: 275 TFVVSEDGDV 284
           T  + +   V
Sbjct: 622 TAAICQHKSV 631


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 161/341 (47%), Gaps = 41/341 (12%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-----------QLV 95
           + +IQ AAG   T++++D G VY+ G +  G +    QG   ++             +LV
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSL--SQGPNAMSQNNNNNNTRTGQLKLV 58

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           E L  KNI  + A+ G      L+  G+V++F +    +LGH  + +   P  +   L  
Sbjct: 59  EKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQV-EALSR 117

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             V  +   Y Y    +C    M +YS G    G+LG G+  D+  P LIE    LN + 
Sbjct: 118 KFVTAVGCSY-YHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEA---LNGKR 172

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATG 271
           +V +  G +H+ V   DG + ++G    G LG  G++   S+PK V+ L   K+  +A G
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL---KSTQIACG 229

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
            Y T  ++ +G +YS+G  +S  LG        G   A  + P LV  L+  ++ +V ++
Sbjct: 230 YYHTVAIN-NGQLYSWGKNDSGQLG-------IGIYSAKEILPTLVRDLE--DQEIVSVA 279

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                    HT AL  +G+L++FG    GQLG    NN  +
Sbjct: 280 C-----GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCK 315



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 102/195 (52%), Gaps = 18/195 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P    +L G RI+    G   +++ S  G++++FG++  G+   G+ G+   ++ P+ V
Sbjct: 161 SPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQL--GITGSDGNISLPKEV 218

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENI 154
           ++LK+    Q A G + T  ++  G++Y++   +  +LG       ++ P  L+  LE+ 
Sbjct: 219 KNLKS---TQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILP-TLVRDLEDQ 273

Query: 155 PVVQIAAGYCYLLALACQPSGMA--VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            +V +A G  + LAL     G A  ++S G    G+LG G+  +   P LI+   L++ +
Sbjct: 274 EIVSVACGCYHTLAL-----GYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQ--GLIDKK 326

Query: 213 PVVVAAGAWHAAVVG 227
              +AAG +H+ V+ 
Sbjct: 327 VCQIAAGFYHSIVLA 341


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 32/299 (10%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           D   VY +G +S  +   G    + +  P+L +   +  +++A  G + T  +S +G V 
Sbjct: 368 DTVMVYVWGSNSSHQLAEGT--LEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAVK 423

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLL----GTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
               G+  RLG     N   P  L+     T+  +   + + G+     LA    G  V+
Sbjct: 424 ACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH----TLAVTAEG-EVF 478

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           S G G  GKLGHG+   +K+P++I Q  LL    V V+AG  H+A V  DG + TWG G 
Sbjct: 479 SWGDGDYGKLGHGNSATQKYPKII-QGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGD 537

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHN 298
           +G LGH +    +VP +V+ ++ V    VA G   T  V++DG  V+SFG G++  LGH 
Sbjct: 538 FGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH- 594

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
               G  NR   V  P+++ +L     R V     +S+       ALT +G+++A+G G
Sbjct: 595 ----GDTNR---VYRPKVIEALHGFIIRKVCAGSQSSL-------ALTSAGQVFAWGCG 639



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 154/299 (51%), Gaps = 25/299 (8%)

Query: 47  IRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVV 104
           +R + ++ G+ G T+ ++  G+V+++G   +G+  +G   T+    P++++  L    VV
Sbjct: 455 MRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHGNSATQ--KYPKIIQGPLLGKVVV 512

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAAGY 163
             + G   +A ++ +G +YT+  G+  RLGH    +D     +   +++I  V Q+A G 
Sbjct: 513 CVSAGYRHSAAVTNDGELYTWGEGDFGRLGH----SDSHSRNVPTLVKDISGVGQVACGS 568

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + +A+A    G  V+S G G  GKLGHG       P++IE      ++   V AG+  +
Sbjct: 569 SHTIAVA--QDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRK--VCAGSQSS 624

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             +   G+V  WG G   CLG G+ E  S+ P++++ L+  K I ++ GD     +S + 
Sbjct: 625 LALTSAGQVFAWGCG--SCLGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHEN 682

Query: 283 DVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           +V+++        G+NA+   GQG+    V  P+ V  L+ V+ + +    ++S+ W A
Sbjct: 683 EVFAW--------GNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTA 733



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 143/312 (45%), Gaps = 25/312 (8%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T  +S  G V A GK S+G    G    + +    ++E  + +  V ++ G +  
Sbjct: 408 AGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGH 467

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T  ++ EG V+++  G+  +LGH        P  + G L    VV ++AGY +  A+   
Sbjct: 468 TLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT-- 525

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            +   +Y+ G G  G+LGH        P L++    +      VA G+ H   V QDGR+
Sbjct: 526 -NDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG----QVACGSSHTIAVAQDGRI 580

Query: 233 C-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
             ++G G  G LGHG+      PKV++AL+      V  G  ++  ++  G V+++GCG 
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS 640

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
                      G G+     L P+L+  L     +++ IS  +S     H  AL+   ++
Sbjct: 641 CL---------GCGSSETTSLRPRLIEELSIT--KIIDISCGDS-----HCLALSHENEV 684

Query: 352 YAFGAGDKGQLG 363
           +A+G    GQ G
Sbjct: 685 FAWGNNAMGQCG 696



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 148/328 (45%), Gaps = 63/328 (19%)

Query: 74   DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV---LSREGRVYTFSWGND 130
            ++F   E+   G    T P  +++ K  F++   + ++ T+      + G+   + WGN 
Sbjct: 3811 EAFIAPEFHHPGAAEFTKP--LDNSKWTFMMDEQLMSWATSRPEDWQQGGKSEVYLWGN- 3867

Query: 131  ARLGHHTEPNDVEPHPLLGTLENIPVV--------QIAAGY-CYLLALACQPSGMAVYSV 181
               G H +  D       GT  ++P +        Q+  G  C  L    Q +G  V +V
Sbjct: 3868 ---GRHGQLADA------GTSASVPTLAPSLSQTQQVVCGQNCTFLV---QANG-TVLAV 3914

Query: 182  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGRY 240
            G G  G+LG G+  D   P +I   Q   +  +V + G+  H+  + + G V +WG G Y
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDY 3974

Query: 241  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            G LGHGN E +  PK ++ L   + + +A G   + VV+ DG +++FG G+S  LG  + 
Sbjct: 3975 GKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRST 4034

Query: 301  ADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWN------------------- 339
                    +N + P+ VT+L    + +R+  I L +++  N                   
Sbjct: 4035 --------SNKMIPERVTALDGHHIGQRL--IGLPDAMLKNHNRPQIIPALEGVFIEDIA 4084

Query: 340  ---AHTFALTESGKLYAFGAGDKGQLGI 364
                H  AL+ +G +YA+G   + QLG+
Sbjct: 4085 VGCEHILALSNTGDVYAWGCNCEAQLGL 4112



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 51/315 (16%)

Query: 67   QVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            +VY +G    G+ A+ G   +    +P L ++       Q   G   T ++   G V   
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSLSQT------QQVVCGQNCTFLVQANGTVLAV 3914

Query: 126  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY-CYLLALACQPSGMAVYSVGCG 184
              G+  RLG     +D+    ++  L+   V Q+   Y     +LA   +G  V+S G G
Sbjct: 3915 GEGSYGRLGQGNS-DDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETG-EVFSWGDG 3972

Query: 185  LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
              GKLGHG+   ++ P+ IE  Q    + V +A G  H+AVV  DG++ T+G G  G LG
Sbjct: 3973 DYGKLGHGNSERQRRPKQIEGLQ--GEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLG 4030

Query: 245  HGNEECESVP-----------------------------KVVQALNDVKAIHVATGDYTT 275
              +   + +P                             +++ AL  V    +A G    
Sbjct: 4031 QRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHI 4090

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTN 334
              +S  GDVY++GC   A LG           H+N V  P LVT+L+  N R +     +
Sbjct: 4091 LALSNTGDVYAWGCNCEAQLGLG---------HSNPVKEPILVTTLQGKNIRQISAGRCH 4141

Query: 335  SIYWNAHTFALTESG 349
            S  W     +   SG
Sbjct: 4142 SSAWTTPALSTRASG 4156



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 38/219 (17%)

Query: 37   TPLYCRSLQG---IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
            TP    +LQG    +++ +    G ++ +++ G+V+++G   +G+  +G   ++    P+
Sbjct: 3932 TPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHG--NSERQRRPK 3989

Query: 94   LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH-------- 145
             +E L+   VVQ A G   +AV++ +G+++TF  G+  RLG  +  N + P         
Sbjct: 3990 QIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGH 4049

Query: 146  --------------------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
                                 ++  LE + +  IA G  ++LAL+   +   VY+ GC  
Sbjct: 4050 HIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILALS---NTGDVYAWGCNC 4106

Query: 186  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
              +LG G     K P L+   Q  N++   ++AG  H++
Sbjct: 4107 EAQLGLGHSNPVKEPILVTTLQGKNIR--QISAGRCHSS 4143



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIR----IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +G    LG   + T  Y + +QG      ++  +AG   +  +++ G++Y +G+  FG  
Sbjct: 482 DGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRL 541

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTE 138
            +    ++ V  P LV+ +    V Q A G+  T  ++++GR V++F  G++ +LG H +
Sbjct: 542 GHSDSHSRNV--PTLVKDISG--VGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG-HGD 596

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDE 197
            N V    ++  L    + ++ AG    LAL    S   V++ GC  G  LG G S T  
Sbjct: 597 TNRVYRPKVIEALHGFIIRKVCAGSQSSLALT---SAGQVFAWGC--GSCLGCGSSETTS 651

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKV 256
             PRLIE+  +  +  + ++ G  H   +  +  V  WG    G  G G+     + PK 
Sbjct: 652 LRPRLIEELSITKI--IDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKK 709

Query: 257 VQALNDVKAIHVATG 271
           V  L  V    +  G
Sbjct: 710 VIGLEGVSIQQITAG 724



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 281
            +V  +G V   G G YG LG GN +    P ++ AL       + T    D  +  ++E 
Sbjct: 3904 LVQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            G+V+S+G G+   LGH     G   R      P+ +  L+   E VVQ++         H
Sbjct: 3964 GEVFSWGDGDYGKLGH-----GNSERQRR---PKQIEGLQ--GEEVVQLACGFK-----H 4008

Query: 342  TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +  +T  GKL+ FG+GD G+LG    +N+     PERV
Sbjct: 4009 SAVVTADGKLFTFGSGDSGRLGQRSTSNKM---IPERV 4043



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLV 95
           P    +L G  I +  AG+  ++ ++ AGQV+A+G  S      G  G+   TS  P+L+
Sbjct: 603 PKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC----LGC-GSSETTSLRPRLI 657

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTL 151
           E L    ++  + G+     LS E  V  F+WGN+A +G     HT     +P  ++G L
Sbjct: 658 EELSITKIIDISCGDSHCLALSHENEV--FAWGNNA-MGQCGQGHTSTPVTKPKKVIG-L 713

Query: 152 ENIPVVQIAAGYCYLLALACQPS 174
           E + + QI AG  + LA    P+
Sbjct: 714 EGVSIQQITAGTSHSLAWTAVPT 736


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 146/330 (44%), Gaps = 36/330 (10%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + +     G     L++  G+V+ +G++S G   +G +   +   P LVESL    V   
Sbjct: 92  LDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVESLAVSNVDFV 149

Query: 107 AIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           A G F T  ++  G +YT+  G  N   LGH T+ +   P  + G LE   V  ++ G  
Sbjct: 150 ACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTW 209

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   +    S   +++ G G  G LGHG+R     PR +E   L  L+ + VA G WH A
Sbjct: 210 HTALIT---STGQLFTFGDGTFGVLGHGNRESIPCPREVES--LSGLKTIAVACGVWHTA 264

Query: 225 VVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            V +            G++ TWG G    LGHG++E    P  V +L D     +A G  
Sbjct: 265 AVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHS 324

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++  G V+  G         N +    GN  ++   P LV  +  + E VVQ++  
Sbjct: 325 LTVGLTTSGQVWGMG---------NTVYGQLGNPRSDGKLPCLVEDI--MGENVVQVACG 373

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + H   LT   +++ +G G  G+LG
Sbjct: 374 -----SYHVAVLTVKSEVFTWGKGANGRLG 398



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 20/249 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G ++   + G   T LI+  GQ++ FG  +FG   +G + +  +  P+ VESL  + 
Sbjct: 195 ALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRES--IPCPREVESLSGLK 252

Query: 103 VVQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  +   V+P   + +L
Sbjct: 253 TIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKP-TCVASL 311

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+   + L    SG  V+ +G  + G+LG+  R+D K P L+E     N+
Sbjct: 312 IDYDFHRIACGHSLTVGLTT--SGQ-VWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENV 367

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V VA G++H AV+     V TWG G  G LGHG+ E   +P +V+ L D    H+A G
Sbjct: 368 --VQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACG 425

Query: 272 DYTTFVVSE 280
              T  + +
Sbjct: 426 ANFTAAICQ 434



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 33/285 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   + V     G    A++++ G V+T+   +  RLGH +  + +  HP L  +
Sbjct: 83  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSL--V 138

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLL 209
           E++ V  +    C         +   +Y+ G G    G LGHG+      P+ I    L 
Sbjct: 139 ESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISG-ALE 197

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
             Q   V+ G WH A++   G++ T+G G +G LGHGN E    P+ V++L+ +K I VA
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257

Query: 270 TGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            G + T  V E            G ++++G G+   LGH       G++   V  P  V 
Sbjct: 258 CGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPRV-KPTCVA 309

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           SL  ++    +I+  +S+     T  LT SG+++  G    GQLG
Sbjct: 310 SL--IDYDFHRIACGHSL-----TVGLTTSGQVWGMGNTVYGQLG 347


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 157/360 (43%), Gaps = 43/360 (11%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           I+NER  + ++        P    S   + +   A G     +++  G+VY +G+   G 
Sbjct: 280 IVNERFVQNSIYSL----VPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR 335

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
              G +    ++SP++V+SL +I V + A G + T  L+  G VYT  WG D+      E
Sbjct: 336 --LGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYT--WGKDSCSDLVDE 391

Query: 139 ---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
               +    H     +E I +  IA G  +   ++   S   +++ G G  G LGHG+  
Sbjct: 392 GRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVS---SCGRLFTYGDGTFGVLGHGNYH 448

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLG 244
               P+ +E  + L ++ V  A G WH A +              G++ TWG    G LG
Sbjct: 449 SFSSPKEVESLKGLCVRSV--ACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLG 506

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           H +   + VP  V  L D   + V+ G   T  ++  G V++ G  +   LG+  + D  
Sbjct: 507 HADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD-- 564

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
               A V+       LKQ  E V  IS       + H   LT SG +Y +G G+ G+LG+
Sbjct: 565 ---RAVVVEGM----LKQ--EYVKMISCG-----SYHVAVLTSSGSVYTWGKGENGELGL 610



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 22/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI I   A G   T ++S  G+++ +G  +FG   +G   +   +SP+ VESLK + V
Sbjct: 407 VEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHS--FSSPKEVESLKGLCV 464

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
              A G + TA +           +  G+++T+   ++ RLGH    N + P   +  L 
Sbjct: 465 RSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLV 523

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +   VQ++ G    LAL    +   V+++G    G+LG+    D    R +    +L  +
Sbjct: 524 DYDFVQVSCGRMMTLALT---NMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQE 576

Query: 213 PV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            V +++ G++H AV+   G V TWG G  G LG G+ E    P  V+AL D +   +  G
Sbjct: 577 YVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCG 636

Query: 272 DYTTFVV 278
              T  +
Sbjct: 637 PSFTVAI 643


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 47/365 (12%)

Query: 31  GREVNGTP---LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  +N T    L  ++L+   ++ A   A G    +L++  G+++++G+   G+  +G++
Sbjct: 265 GNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE 324

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                  P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E +
Sbjct: 325 TD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNESS 380

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     P
Sbjct: 381 CWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSVP 437

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHGN 247
           R +E   L+ L    VA G WH A V                G+V TWG G  G LGHG+
Sbjct: 438 REVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGD 495

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + + +P+ V +L +     VA G   T   +  G VY+ G      LG N  A G    
Sbjct: 496 NDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN--- 551

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
                 P+      +V   +V+ S+      + H   LT   ++Y +G G  GQLG   V
Sbjct: 552 -----FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNV 600

Query: 368 NNQTE 372
            N+ E
Sbjct: 601 ENKRE 605



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 37/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   +     A G     +++++G ++++  G   +LGH  E +  +P   + ++
Sbjct: 278 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPK-FISSV 336

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
             +    +A G  +  A+  Q   +  +  G      LGHG+ +    P+ +    L  L
Sbjct: 337 RGLGFKSLACGDFHTCAIT-QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGL 394

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               VA G WH AVV   G++ T+G G +G LGHG+    SVP+ V++L  +    VA G
Sbjct: 395 YVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACG 454

Query: 272 DYTTFVV-------------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            + T  V             S  G V+++G GE   LGH       G+    +L P+ V 
Sbjct: 455 VWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH-------GDNDTKLL-PECVI 506

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN-PE 377
           SL   NE + Q++  +S+     T + T  G +Y  G+   GQLG     N T +GN PE
Sbjct: 507 SL--TNENICQVACGHSL-----TVSRTSRGHVYTMGSTAYGQLG-----NPTAKGNFPE 554

Query: 378 RVDIDL 383
           RV+ D+
Sbjct: 555 RVEGDI 560



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG+ +   A G   T +++ +GQ++ FG  +FG   +G + +  V  P+ VESL  + V
Sbjct: 391 LQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIV 448

Query: 104 VQAAIGNFFTA-------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            + A G + TA             V S  G+V+T+  G   +LGH      + P  ++ +
Sbjct: 449 TKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-S 507

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L N  + Q+A G+   ++   + S   VY++G    G+LG+ +      P  +E   ++ 
Sbjct: 508 LTNENICQVACGHSLTVS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVE 562

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                +A G++H AV+     + TWG G  G LGHGN E +  P VV  L + +   +  
Sbjct: 563 ASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITC 622

Query: 271 GDYTTFVV 278
           G   T V+
Sbjct: 623 GSNFTAVI 630



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 320 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDG-----THNVDLLG 374

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 375 HGN-ESSCWIPKRVTGDLQ----GLYVSDVACGPW--HTAVVASSGQLFTFGDGTFGALG 427


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 33/328 (10%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   +    +G+  ++ I D G ++ +G +  G   +  + TK    P  V++L N+ 
Sbjct: 34  ALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPE-TKTENIPSQVKALANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-------ENIP 155
           +VQAAIG +    +  +GR Y +      + G     +++E  PL   +         + 
Sbjct: 93  IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEME-RPLRRDIVIPKRCAPKLV 151

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+AAG  + + L  +     V+S     G     G       P  ++  + + L    
Sbjct: 152 VRQVAAGGTHSVVLTREGH---VWS----WGQPWPPGDIKQISIPVRVQGLENVRL---- 200

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A GA+H   + ++G +  WG   YG LG G+ +  S P  VQ L+ +  + +A G + +
Sbjct: 201 IAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHS 260

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +++ G+VY +G GE   LG         N  ++ + PQ V  L    E ++Q+S   +
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGFGD------NDKSSKMLPQKVNLL--AGEDIIQVSCGGT 312

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                H+ ALT  G++++FG GD G+LG
Sbjct: 313 -----HSVALTRDGRIFSFGRGDHGRLG 335



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 27/270 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLV 95
           P   ++L  ++I+QAA G    + + D G+ YA+G + +G+   E G    +      +V
Sbjct: 82  PSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIV 141

Query: 96  ---ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLL 148
                   + V Q A G   + VL+REG V+++        G    P D++    P  + 
Sbjct: 142 IPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSW--------GQPWPPGDIKQISIPVRVQ 193

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           G LEN+ ++ + A       LA + +G  +++ G    G+LG G       P  ++    
Sbjct: 194 G-LENVRLIAVGA----FHNLALEENG-TLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDS 247

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAI 266
           L L  V +AAG WH+  +   G V  WG G +G LG G+ +  S  +P+ V  L     I
Sbjct: 248 LTL--VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII 305

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            V+ G   +  ++ DG ++SFG G+   LG
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 16/150 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG G  + +    VV+AL       V +G   +  + +DG ++++G  +
Sbjct: 7   VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH         +  N+  P  V +L   N ++VQ ++     W  H  A+ + G+ 
Sbjct: 67  RGTLGHPPE-----TKTENI--PSQVKAL--ANVKIVQAAIGG---W--HCLAVDDQGRA 112

Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           YA+G  + GQ G E   ++ ER  P R DI
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMER--PLRRDI 140


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 17/250 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   + G   T LI+ +G++Y FG  +FG   +G + T  ++ P+ VESLK +  
Sbjct: 365 LEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRT 422

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + TA +         +  G+++T+  G+  RLGH    + ++P   + +L + 
Sbjct: 423 ISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDY 481

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              +   G+   + L    +   +++ G  + G+LG+ +  D ++PRL+E+ +L     V
Sbjct: 482 NFHKAVCGHTLTIGLT---TSGHIFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVV 536

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA GA+H AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G   
Sbjct: 537 EVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGF 596

Query: 275 TFVVSEDGDV 284
           T  + +   V
Sbjct: 597 TAAICQHKSV 606



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 146/324 (45%), Gaps = 37/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     L++   +V+ +G++  G   +G  GT +   P+LVESL    V   A G F 
Sbjct: 267 ACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVESLSICNVETIACGEFH 324

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +  +   P  + G LE +   Q++A  C    
Sbjct: 325 TCAITATGDLYT--WGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL---QVSAVSCGTWH 379

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A   S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ + V+ G WH A V +
Sbjct: 380 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVES--LKGLRTISVSCGVWHTAAVVE 437

Query: 229 ---------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG+   +  P  V +L D        G   T  ++
Sbjct: 438 VIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 497

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G +++ G      LG N   DG+         P+LV   K     VV+++     Y  
Sbjct: 498 TSGHIFTAGSSVYGQLG-NPNNDGR--------YPRLVEE-KLGGGGVVEVAC--GAY-- 543

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT+SG++Y +G G  G+LG
Sbjct: 544 -HVAVLTQSGEVYTWGKGANGRLG 566



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 27/292 (9%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
           Y       +  P+ +ES   + V   A G    A+++R+  V+T+      RLGH    +
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTS 300

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
             +P  L+ +L    V  IA G  +  A+      +  +  G    G LGHGS      P
Sbjct: 301 IFQPR-LVESLSICNVETIACGEFHTCAITAT-GDLYTWGDGTHNAGLLGHGSNVSHWIP 358

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           + +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V++L
Sbjct: 359 KRVSG-PLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL 417

Query: 261 NDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHANV 311
             ++ I V+ G + T  V E          G ++++G G+   LGH       G+R ++ 
Sbjct: 418 KGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGH-------GDR-SSK 469

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           L P  V SL       +  +   ++  +  T  LT SG ++  G+   GQLG
Sbjct: 470 LKPTCVPSL-------IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG 514


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 36/322 (11%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G   + L++  G+V+ +G++S G   +G +   +   P+L+ESL    V   A G F T 
Sbjct: 85  GVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIESLAVCNVDIVACGEFHTC 142

Query: 115 VLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
            ++  G +YT+  G  N   LGH  + +   P  + G LE + V  ++ G  +   +   
Sbjct: 143 AVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTM 202

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---- 228
                +++ G G  G LGHG+R     P+ +E   L  L+ + VA G WH A + +    
Sbjct: 203 GQ---LFTFGDGTFGVLGHGNRESISCPKEVES--LSGLKTISVACGVWHTAAIVEVIVT 257

Query: 229 -------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
                   G++ TWG G    LGHG++E    P  V +L D     +A G   T  ++  
Sbjct: 258 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTS 317

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V S G         N +    GN  ++   P LV  +  V E VVQ++       + H
Sbjct: 318 GKVLSMG---------NTVYGQLGNPRSDGKIPCLVEEI--VGENVVQVACG-----SYH 361

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
              LT   +++ +G G  G+LG
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLG 383



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 20/249 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G+ +   + G   T LI+  GQ++ FG  +FG   +G + +  ++ P+ VESL  + 
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRES--ISCPKEVESLSGLK 237

Query: 103 VVQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            +  A G + TA +              G+++T+  G+  RLGH  +   ++P   + +L
Sbjct: 238 TISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKP-TCVASL 296

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    +IA G+   + L    +   V S+G  + G+LG+  R+D K P L+E+    N+
Sbjct: 297 IDYDFHRIACGHSLTVGLT---TSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEIVGENV 352

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V VA G++H AV+     V TWG G  G LGHG+ E   +P +V+AL D    H+A G
Sbjct: 353 --VQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACG 410

Query: 272 DYTTFVVSE 280
              T  + +
Sbjct: 411 ANFTAAICQ 419



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P+ +ES   +       G   +A++++ G V+T+   +  RLGH +  + +  HP L
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRL 122

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 206
             +E++ V  +    C         +   +Y+ G G    G LGHG       P+ I   
Sbjct: 123 --IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG- 179

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  L    V+ G WH A++   G++ T+G G +G LGHGN E  S PK V++L+ +K I
Sbjct: 180 ALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTI 239

Query: 267 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            VA G + T  + E            G ++++G G+   LGH       G++    L P 
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGH-------GDKEPR-LKPT 291

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V SL  ++    +I+  +S+     T  LT SGK+ + G    GQLG
Sbjct: 292 CVASL--IDYDFHRIACGHSL-----TVGLTTSGKVLSMGNTVYGQLG 332


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 17/246 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++   + G   T LI+ +GQ+Y FG  +FG   +G + T  ++ P+ VESLK +  
Sbjct: 366 LEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRT 423

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + +A +         +  G+++T+  G+  RLGH      ++P   + +L + 
Sbjct: 424 ISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP-TCVPSLIDY 482

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              + A G+   + L    SG  +++VG  + G+LG+ +  D ++PRL+E  ++     V
Sbjct: 483 NFHKSACGHTLTIGLTT--SGH-MFTVGSSVYGQLGNPN-NDGRYPRLVED-KVGGGGVV 537

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA G++H AV+   G V TWG G  G LGHG+     VP +V+AL D     +A G   
Sbjct: 538 EVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSF 597

Query: 275 TFVVSE 280
           T  +S+
Sbjct: 598 TAAISQ 603



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 37/324 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G     LI+   +V+ +G++  G   +G  GT +   P+L+ESL    V   A G F 
Sbjct: 268 ACGVKHAALITRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLLESLSICNVEIIACGEFH 325

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +YT  WG    N   LGH +  +   P  + G LE + V  ++ G  +   
Sbjct: 326 TCAVTATGDLYT--WGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTAL 383

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-- 226
           +    S   +Y+ G G  G LGHG+R    +P+ +E   L  L+ + V+ G WH+A V  
Sbjct: 384 IT---SSGQLYTFGDGTFGALGHGNRETISYPKEVES--LKGLRTISVSCGVWHSAAVVE 438

Query: 227 -------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                     G++ TWG G    LGHG+   +  P  V +L D      A G   T  ++
Sbjct: 439 VIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLT 498

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G +++ G      LG N   DG+         P+LV       ++V    +      +
Sbjct: 499 TSGHMFTVGSSVYGQLG-NPNNDGR--------YPRLV------EDKVGGGGVVEVACGS 543

Query: 340 AHTFALTESGKLYAFGAGDKGQLG 363
            H   LT +G++Y +G G  G+LG
Sbjct: 544 YHVAVLTNTGEVYTWGKGANGRLG 567



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           +G   T  +  P+ +ES   + V   A G    A+++R+  V  F+WG +   RLGH   
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEV--FTWGEECSGRLGHGAG 299

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +  +P  LL +L    V  IA G  +  A+      +  +  G    G LGHGS     
Sbjct: 300 TSIFQPR-LLESLSICNVEIIACGEFHTCAVTAT-GDLYTWGDGTHNAGLLGHGSTVSHW 357

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+ +    L  LQ   V+ G WH A++   G++ T+G G +G LGHGN E  S PK V+
Sbjct: 358 IPKRVSG-PLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVE 416

Query: 259 ALNDVKAIHVATGDYTTFVVSE---------DGDVYSFGCGESASLGHNAIADGQGNRHA 309
           +L  ++ I V+ G + +  V E          G ++++G G+   LGH       G+R A
Sbjct: 417 SLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGH-------GDRSA 469

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             L P  V SL       +  +   S   +  T  LT SG ++  G+   GQLG
Sbjct: 470 K-LKPTCVPSL-------IDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLG 515


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 28/282 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + +   + G     LI+  G+V+ +G  S G+  + V     V  P++VES
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMD--VGMPKVVES 358

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLEN 153
           L ++ +     G + T  L+  G +YT  WG++    + T+         P+ L G L+ 
Sbjct: 359 LDDVHIKSVVCGEYQTCALTHSGELYT--WGDNKNGANLTDEMRTRSQWLPYKLFGPLDG 416

Query: 154 IPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           I + ++A G  +  +++L+ Q     +++ G G  G LGHGS     HP+ +   + L++
Sbjct: 417 ITISKVACGEWHTAIVSLSGQ-----LFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSV 471

Query: 212 QPVVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           + V  A G+WH A +              G++ TWG G  G LGH + E + VP  V  L
Sbjct: 472 KSV--ACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL 529

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            D   I V+ G   T  ++  G VY+ G      LG+    D
Sbjct: 530 VDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKD 571



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 39/288 (13%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+L+ES   + V   ++G    A++++ G V+ +  G+  +LGH     DV    ++ +L
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVN-MDVGMPKVVESL 359

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL----IEQFQ 207
           +++ +  +  G     AL    SG  +Y+ G    G     + TDE   R      + F 
Sbjct: 360 DDVHIKSVVCGEYQTCALT--HSG-ELYTWGDNKNG----ANLTDEMRTRSQWLPYKLFG 412

Query: 208 LLN-LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L+ +    VA G WH A+V   G++ T+G G +G LGHG+ +  S PK V +L  +   
Sbjct: 413 PLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVK 472

Query: 267 HVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            VA G + T  + +            G ++++G G+   LGH+ +           L P 
Sbjct: 473 SVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKK--------LVPT 524

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            V  L  V+   +++S    +     T ALT +GK+Y  G+   GQLG
Sbjct: 525 CVAKL--VDYDFIRVSCGRML-----TVALTNTGKVYTMGSSVHGQLG 565



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 27/250 (10%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L GI I + A G   T ++S +GQ++ +G  +FG   +G    + V+ P+ V SL+ + V
Sbjct: 414 LDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHG--SLQSVSHPKEVASLRGLSV 471

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
              A G++ TA +           +  G+++T+  G+  RLGH      + P   +  L 
Sbjct: 472 KSVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVP-TCVAKLV 530

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK----HPRLIEQFQL 208
           +   ++++ G   +L +A   +G  VY++G  + G+LG+    D+       +L E+F  
Sbjct: 531 DYDFIRVSCGR--MLTVALTNTG-KVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEF-- 585

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
                  +++G++H AV+   G V TWG G  G LG GN E  + P  V+AL D +   +
Sbjct: 586 ----VKEISSGSYHVAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESI 641

Query: 269 ATGDYTTFVV 278
           A G   T  +
Sbjct: 642 ACGSNLTAAI 651



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 28/188 (14%)

Query: 184 GLGGKLGHGS--RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G+  +LG+ S  + D   P+L+E   +L+++ +  + G  HAA++ + G V  WG G  G
Sbjct: 283 GMVQRLGNQSVMQVDALVPKLLESTAMLDVRSI--SLGRKHAALITKRGEVFCWGDGSRG 340

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGH       +PKVV++L+DV    V  G+Y T  ++  G++Y++G             
Sbjct: 341 KLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWG------------- 387

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERV------VQISLTNSIYWNAHTFALTESGKLYAFG 355
               N++   LT ++ T  + +  ++      + IS      W  HT  ++ SG+L+ +G
Sbjct: 388 ---DNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEW--HTAIVSLSGQLFTYG 442

Query: 356 AGDKGQLG 363
            G  G LG
Sbjct: 443 DGTFGVLG 450


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 34/366 (9%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  + G E         +L    +    AG+  ++ I + G+++ +G +  G   +  
Sbjct: 18  DGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPP 77

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
           + TK  +SP  V +L  + +VQAAIG +    +   G  Y  +WG +   G   E  + +
Sbjct: 78  K-TKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAY--AWGGN-EYGQCGEEPERK 133

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP--- 200
                    +IP  Q  A    +  +A   +   V +       + GH     +  P   
Sbjct: 134 EDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLT-------QEGHVWTWGQPWPPGD 186

Query: 201 --RLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             ++    ++  L+ V V+A GA+H   + +DG +  WG   YG LG G+ +  S P  V
Sbjct: 187 IKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRV 246

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           + L+D+  + +A G + +  ++  G+VY++G GE   LG        G+  ++ + P  V
Sbjct: 247 EGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF-------GDDKSSRMVPLKV 299

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
             L    E +VQ+S   +     H+ ALT  G+++++G GD G+LG      +   G P 
Sbjct: 300 ELL--AGEDIVQVSCGGT-----HSVALTRDGRMFSYGRGDHGRLGY---GRKLTTGQPM 349

Query: 378 RVDIDL 383
            VDIDL
Sbjct: 350 GVDIDL 355



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 45/252 (17%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +A  P   AV + G G  G+LG G   ++     +E      +  VV  AG+ ++  + +
Sbjct: 1   MAAPPRATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVV--AGSRNSLAICE 58

Query: 229 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           DGR+ TWGW + G LGH  + + ES P  V AL  +K +  A G +    V ++G  Y++
Sbjct: 59  DGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAW 118

Query: 288 GCGESASLGHNAIADGQGNR--------------------------HANVLT-------- 313
           G  E    G        G R                          H+ VLT        
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTW 178

Query: 314 --PQLVTSLKQVNE--RVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVN 368
             P     +KQ++   RV  +     I   A H  ALTE G L+A+G  + GQLG     
Sbjct: 179 GQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLG---TG 235

Query: 369 NQTERGNPERVD 380
           +   R +P RV+
Sbjct: 236 DTQPRSHPIRVE 247


>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
          Length = 333

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 30/271 (11%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           R+   +R + + + A  ++LI+  G+++++G++  G+  +G   TK V +P+L+E L + 
Sbjct: 1   RTRGRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRLIEGLSHE 58

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            +V AA G   T  L+  G V+ F      +LG   +  D  P P        P+ ++A 
Sbjct: 59  VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNGQPITKMAC 117

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPRLIEQF--- 206
           G  + + + C+ +   +YS GC   G+LGH S               E  PR +  F   
Sbjct: 118 GAEFSMIMDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEK 174

Query: 207 ----QLLNLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
               Q+L +  VVV   A GA H  V+    RV +WG+G YG LGH  ++ E VP++V+ 
Sbjct: 175 TKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 234

Query: 260 LN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
            +     A  +  G   +F VSE G ++ +G
Sbjct: 235 FDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 265



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 16/219 (7%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  + +G C   +L     G  ++S G    G+LGHG     + PRLIE    L+ + +V
Sbjct: 6   VRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLIEG---LSHEVIV 61

Query: 216 VAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDY 273
            AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + + + I  +A G  
Sbjct: 62  SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMACGAE 120

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V    +  +    
Sbjct: 121 FSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 180

Query: 330 ISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
           + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 219



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL    S
Sbjct: 20  LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 78

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              V++ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G +
Sbjct: 79  ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 131

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE VP+ V              + +V    V
Sbjct: 132 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 191

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   T V+     V+S+G G    LGH    D         + P+LV           
Sbjct: 192 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 243

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 244 QIYAGYTC-----SFAVSEVGGLFFWGA 266



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 43/251 (17%)

Query: 30  LGREVNGTPLYCRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG + +  P   + +  G  I + A GA  +M++   G +Y+FG   +G+  +   G K 
Sbjct: 92  LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG-KF 150

Query: 89  VTSPQLVE-----------------------SLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           +   Q +E                        + N+ V   A G   T VL  + RV+++
Sbjct: 151 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSW 210

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVG 182
            +G   RLGH  + +++ P   L  L + P     QI AGY       C     AV  VG
Sbjct: 211 GFGGYGRLGHAEQKDEMVPR--LVKLFDFPGRGASQIYAGY------TCS---FAVSEVG 259

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYG 241
                   + SR    +P+ ++      ++ +        + +V  D    +WG    +G
Sbjct: 260 GLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGK---SSIIVAADESTISWGPSPTFG 316

Query: 242 CLGHGNEECES 252
            LG+G+ + +S
Sbjct: 317 ELGYGDHKPKS 327



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 18/98 (18%)

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           + +++ +G ++S+G  E   LGH     G   R   V  P+L+  L   +E +V  +   
Sbjct: 18  SLLITTEGKLWSWGRNEKGQLGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGR 67

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +     HT ALTE+G ++AFG    GQLG+    NQT+
Sbjct: 68  N-----HTLALTETGSVFAFGENKMGQLGL---GNQTD 97


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 47/365 (12%)

Query: 31  GREVNGTP---LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  +N T    L  ++L+   ++ A   A G    +L++  G+++++G+   G+  +G++
Sbjct: 278 GNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE 337

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                  P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E +
Sbjct: 338 TD--AQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNESS 393

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     P
Sbjct: 394 CWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRSTSVP 450

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHGN 247
           R +E   L+ L    VA G WH A V                G+V TWG G  G LGHG+
Sbjct: 451 REVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGD 508

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + + +P+ V +L +     VA G   T   +  G VY+ G      LG N  A G    
Sbjct: 509 NDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGN--- 564

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
                 P+      +V   +V+ S+      + H   LT   ++Y +G G  GQLG   V
Sbjct: 565 -----FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNV 613

Query: 368 NNQTE 372
            N+ E
Sbjct: 614 ENKRE 618



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 37/306 (12%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+ +ES   +     A G     +++++G ++++  G   +LGH  E +  +P   + ++
Sbjct: 291 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPK-FISSV 349

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
             +    +A G  +  A+  Q   +  +  G      LGHG+ +    P+ +    L  L
Sbjct: 350 RGLGFKSLACGDFHTCAIT-QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGL 407

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               VA G WH AVV   G++ T+G G +G LGHG+    SVP+ V++L  +    VA G
Sbjct: 408 YVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACG 467

Query: 272 DYTTFVV-------------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            + T  V             S  G V+++G GE   LGH       G+    +L P+ V 
Sbjct: 468 VWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH-------GDNDTKLL-PECVI 519

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN-PE 377
           SL   NE + Q++  +S+     T + T  G +Y  G+   GQLG     N T +GN PE
Sbjct: 520 SL--TNENICQVACGHSL-----TVSRTSRGHVYTMGSTAYGQLG-----NPTAKGNFPE 567

Query: 378 RVDIDL 383
           RV+ D+
Sbjct: 568 RVEGDI 573



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG+ +   A G   T +++ +GQ++ FG  +FG   +G + +  V  P+ VESL  + V
Sbjct: 404 LQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIGLIV 461

Query: 104 VQAAIGNFFTA-------------VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            + A G + TA             V S  G+V+T+  G   +LGH      + P  ++ +
Sbjct: 462 TKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI-S 520

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L N  + Q+A G+   ++   + S   VY++G    G+LG+ +      P  +E   ++ 
Sbjct: 521 LTNENICQVACGHSLTVS---RTSRGHVYTMGSTAYGQLGNPT-AKGNFPERVEG-DIVE 575

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                +A G++H AV+     + TWG G  G LGHGN E +  P VV  L + +   +  
Sbjct: 576 ASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITC 635

Query: 271 GDYTTFVV 278
           G   T V+
Sbjct: 636 GSNFTAVI 643



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 276 GTGNSL-NSTTEDALLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 332

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 333 GHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT-----HNVDLLG 387

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 388 HGN-ESSCWIPKRVTGDLQ----GLYVSDVACGPW--HTAVVASSGQLFTFGDGTFGALG 440


>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 383

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 43/366 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SLQ   I   A G G T+ ++  GQVY+ G   +G  + G+   K V    L++S
Sbjct: 23  PKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYG--QLGLGSLKEVEGITLIDS 80

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIP 155
           +    V+  A G+  +  ++ +G +Y+  +G    LG  T    +E   L+ +L  E   
Sbjct: 81  IPEK-VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEK 139

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--------------RTDEKHPR 201
           ++++AAG+ + +AL+   SG  VYS G    G LGHG               R  E  PR
Sbjct: 140 IIKVAAGHGFSIALS--ESG-KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPR 196

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           LI   +   ++   ++ G+ HA  + ++G    WG GRY C    NE     P+ +  L 
Sbjct: 197 LIRALEKEQME--YISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLP 254

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
                 + +G   T  +++ G V+++G      L       G G +  +   P++V  L 
Sbjct: 255 GPWK-QIVSGGAHTLGLTKGGQVWAWGVNHFGCL-------GVGEQRTSPGEPRIVEKLL 306

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-------ELVNNQTERG 374
           Q  +  +Q       +    + A+   G +Y++G G  G LG        E V  Q E+G
Sbjct: 307 QQAKEPIQWIAAGWFF----SMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 362

Query: 375 NPERVD 380
            P +VD
Sbjct: 363 EPLQVD 368



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 147/319 (46%), Gaps = 40/319 (12%)

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           E E  V G   V  P++V SL+N  +   A G  FT  ++++G+VY+   G   +LG  +
Sbjct: 9   EYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGS 68

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRT 195
              +VE   L+ ++    V+  AAG  + L +  Q     +YS G G  G+LG G  SR 
Sbjct: 69  -LKEVEGITLIDSIPE-KVITCAAGDRHSLFVTEQGH---LYSCGYGKRGELGLGTISRR 123

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------- 246
            E  P+L+E       + + VAAG   +  + + G+V ++G    G LGHG         
Sbjct: 124 MET-PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGIFLW 182

Query: 247 -----NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
                +   E+ P++++AL   +  +++ G    F ++++G  + +GCG      H    
Sbjct: 183 EPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRY----HCFAT 238

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           D +     N   PQ +  L    +++V           AHT  LT+ G+++A+G    G 
Sbjct: 239 DNE----VNWEQPQALFHLPGPWKQIVSG--------GAHTLGLTKGGQVWAWGVNHFGC 286

Query: 362 LGIELVNNQTERGNPERVD 380
           LG+     +T  G P  V+
Sbjct: 287 LGVG--EQRTSPGEPRIVE 303



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 27/255 (10%)

Query: 25  GKRNLLG-----REVNGTPLYCRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           GKR  LG     R +  TP    SL  +  +II+ AAG G ++ +S++G+VY+FG  + G
Sbjct: 110 GKRGELGLGTISRRME-TPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDG 168

Query: 78  EAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
              +G V G             + TSP+L+ +L+   +   + G+     +++EG  + +
Sbjct: 169 HLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGW 228

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
             G         E N  +P  L       P  QI +G  + L L     G  V++ G   
Sbjct: 229 GCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHTLGLT---KGGQVWAWGVNH 283

Query: 186 GGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G LG G  RT    PR++E+      +P+  +AAG + +  V  +G V +WG G  G L
Sbjct: 284 FGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGAL 343

Query: 244 GHGNEECESVPKVVQ 258
           G G EE +  P  +Q
Sbjct: 344 GTGEEEDKWEPVAIQ 358


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 34/311 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + Q   G   T++++ +G+V++ G +   +  +  Q TK    P+ VE L    + + + 
Sbjct: 36  VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTK----PEKVEGLDFYRITKISC 91

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCY 165
           G   T   +  G++  F WG+D+  +LG +      +P P ++ +L    +VQI+ G  +
Sbjct: 92  GGNHTLAFNEWGQL--FGWGSDSHGQLGFN---GTTQPLPKIIKSLATFHIVQISCGKNH 146

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            LAL    +   +YS G    G+LG G R++ EK P LI+   LL +    +A G+ H+ 
Sbjct: 147 SLALT---NNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKS--LLGIPIAFIACGSNHSF 201

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            + + G +  WG   YG LG  +EE +  P  ++ L  ++  ++A G+  +  +S DG V
Sbjct: 202 ALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGV 261

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           ++ G G    LGH +         +N + P+ +  L  +   V Q+S         HT A
Sbjct: 262 FTCGAGMYGQLGHGST--------SNEILPRKIMEL--MGSTVTQVSCGKR-----HTLA 306

Query: 345 LTES-GKLYAF 354
           L  S G++Y+F
Sbjct: 307 LVPSRGRVYSF 317



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 12/267 (4%)

Query: 24  NGKRNLLGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           N   + LG +   T P     L   RI + + G   T+  ++ GQ++ +G DS G+   G
Sbjct: 60  NNDLDQLGHKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL--G 117

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
             GT     P++++SL    +VQ + G   +  L+  G +Y++    D +LG     ++ 
Sbjct: 118 FNGTT-QPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR-SEY 175

Query: 143 EPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           E  P L+ +L  IP+  IA G  +  AL+   SG A+Y  G    G+LG     ++ HP 
Sbjct: 176 EKQPTLIKSLLGIPIAFIACGSNHSFALS--KSG-AIYGWGKNTYGQLGLNDEENKLHPT 232

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  + + ++   +A G   +A +  DG V T G G YG LGHG+   E +P+ +  L 
Sbjct: 233 QLKTLRSIRVK--YIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELM 290

Query: 262 DVKAIHVATGD-YTTFVVSEDGDVYSF 287
                 V+ G  +T  +V   G VYSF
Sbjct: 291 GSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 35/267 (13%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH---HTEPNDVEPHPLLGTLENIPVV 157
           V Q  +G   T +L++ G V  FS GN+   +LGH    T+P  VE       L+   + 
Sbjct: 36  VSQVTMGENHTVMLTKSGEV--FSCGNNDLDQLGHKKQRTKPEKVE------GLDFYRIT 87

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           +I+ G  + LA         ++  G    G+LG    T +  P++I+   L     V ++
Sbjct: 88  KISCGGNHTLAFN---EWGQLFGWGSDSHGQLGFNGTT-QPLPKIIKS--LATFHIVQIS 141

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 276
            G  H+  +  +G + +WG    G LG G   E E  P ++++L  +    +A G   +F
Sbjct: 142 CGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSF 201

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +S+ G +Y +G      LG N           N L P  + +L+ +  + +      S 
Sbjct: 202 ALSKSGAIYGWGKNTYGQLGLND--------EENKLHPTQLKTLRSIRVKYIACGEDFSA 253

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
           +       L+  G ++  GAG  GQLG
Sbjct: 254 F-------LSADGGVFTCGAGMYGQLG 273



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 22/202 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+S G     +LGH  +     P  +E      +  +  + G  H     + G++  WG 
Sbjct: 55  VFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKI--SCGGNHTLAFNEWGQLFGWGS 110

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             +G LG  N   + +PK++++L     + ++ G   +  ++ +G++YS+G      LG 
Sbjct: 111 DSHGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG- 168

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                  G R      P L+ SL       + I +      + H+FAL++SG +Y +G  
Sbjct: 169 ------LGMRSEYEKQPTLIKSL-------LGIPIAFIACGSNHSFALSKSGAIYGWGKN 215

Query: 358 DKGQLGIELVNNQTERGNPERV 379
             GQLG+   N++  + +P ++
Sbjct: 216 TYGQLGL---NDEENKLHPTQL 234


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 41/348 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + + Q A G     L++  G+V+ + +++ G   +G+Q    V  P+LVE L    +   
Sbjct: 270 LDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVD--VCRPKLVEFLALTNIDFV 327

Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           A G + T  +S  G ++T  WG    N   LGH ++ +   P  + G +E + V+ +A G
Sbjct: 328 ACGEYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG 385

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +  ALA   +   +++ G G  G LGHG R    +P+ ++   L  L+ + VA G WH
Sbjct: 386 -TWHSALAT--ANGKLFTFGDGAFGVLGHGDRESVSYPKEVK--MLSGLKTLKVACGVWH 440

Query: 223 AA----VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
                 V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D     +A G 
Sbjct: 441 TVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGH 500

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G V++ G      LG ++ +DG+         P LV   + V E V +IS 
Sbjct: 501 TFTVALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEFVEEISC 550

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +      H   LT   +++ +G G  G+LG     ++ +R  P  V+
Sbjct: 551 GDH-----HVAVLTSRSEVFTWGKGSNGRLG---HGDKDDRKTPTLVE 590



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 154/322 (47%), Gaps = 43/322 (13%)

Query: 62  ISDAGQVYAFGKD-SFGEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVL 116
           I   G VY +G+  S G +  GV  +  V      P+ +ES   + V Q A G    A++
Sbjct: 226 IESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALV 285

Query: 117 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSG 175
           +R+G V+T+      RLGH  + +   P  +    L NI  V  A G  +  A++   + 
Sbjct: 286 TRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACGEYHTCAVS---TS 340

Query: 176 MAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
             +++ G G+   G LGHGS      P+ +    +  LQ + VA G WH+A+   +G++ 
Sbjct: 341 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG-PVEGLQVLSVACGTWHSALATANGKLF 399

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE----------DGD 283
           T+G G +G LGHG+ E  S PK V+ L+ +K + VA G + T  + E             
Sbjct: 400 TFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRK 459

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           ++++G G+   LGH       GN+   +L P  V+SL  ++    QI+         HTF
Sbjct: 460 LFTWGDGDKNRLGH-------GNKETYLL-PTCVSSL--IDYNFNQIAC-------GHTF 502

Query: 344 --ALTESGKLYAFGAGDKGQLG 363
             ALT SG ++  G    GQLG
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLG 524



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 18/242 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+ L  +  
Sbjct: 374 VEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRES--VSYPKEVKMLSGLKT 431

Query: 104 VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + T     V+++ G      +++T+  G+  RLGH  +   + P   + +L +
Sbjct: 432 LKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLID 490

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               QIA G+ + +AL    +   V+++G    G+LG  S +D K P L+ Q +L+    
Sbjct: 491 YNFNQIACGHTFTVALT---TSGHVFTMGGTSHGQLG-SSNSDGKLPCLV-QDRLVGEFV 545

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             ++ G  H AV+     V TWG G  G LGHG+++    P +V+AL +     ++ G  
Sbjct: 546 EEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSN 605

Query: 274 TT 275
            T
Sbjct: 606 FT 607


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 44/339 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +L+G  I     GA  +  I + G++Y +G + + +   G + +++ T P+ VE
Sbjct: 100 TPKLTEALEGKAITHVEFGASHSAAIDEEGKLYVWGSNEYSKLGLG-ESSEMETLPREVE 158

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV---EPHP-LLGTL- 151
           +LK I +V  + G++FTA +  +G++Y++ WG     G     +     EP P LL TL 
Sbjct: 159 ALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLV 218

Query: 152 -ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            + +P+  +  G  + +AL        +++ G G  G+LG+G     + P  IE F   N
Sbjct: 219 DQGVPIATVECGEFHTVALTKDGE---IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDN 275

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN------EECESVPKVVQALNDVK 264
           +  V +AAG   +  +   G + +WG      LG G          ES+P +V+A N + 
Sbjct: 276 V--VSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLL 333

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              +A G      V+EDG +Y +G                       + P  +T++ +  
Sbjct: 334 VKQIAAGYDHAAAVTEDGRLYMWGA-------------------KIWIEPHEMTAVNE-- 372

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            ++ Q++         +T  LT+ GK++ FG G    LG
Sbjct: 373 HKMTQVACGRQ-----YTVGLTDDGKVFTFGKGSSNCLG 406



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 19/207 (9%)

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGS--------RTDEKHPRLIEQFQLLNLQPVVVA 217
           +L  A   +  +VY+ G G  G+LGHGS          +E  P+L E  +   +  V   
Sbjct: 59  VLRTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEF- 117

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTF 276
            GA H+A + ++G++  WG   Y  LG G + E E++P+ V+AL  +K + V+ GDY T 
Sbjct: 118 -GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTA 176

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V EDG +YS+G G S                 +  TP+L+T+L  V++ V   ++    
Sbjct: 177 AVDEDGKMYSWGWGGST---MKGAGGLGHAGGKDEPTPRLLTTL--VDQGVPIATVECGE 231

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
           +   HT ALT+ G+++A+G G+ G+LG
Sbjct: 232 F---HTVALTKDGEIWAWGNGEYGRLG 255



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 137/303 (45%), Gaps = 36/303 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLV 89
           E+   P    +L+GI+I+  + G   T  + + G++Y++G       G    G  G K  
Sbjct: 149 EMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDE 208

Query: 90  TSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            +P+L+ +L  + + +     G F T  L+++G ++ +  G   RLG+        P P+
Sbjct: 209 PTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPI 268

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG------CGLGGKLGHGSRTDEKHPR 201
                   VV IAAG  +  AL  +     +YS G       G+GG L       E  P 
Sbjct: 269 E-FFSKDNVVSIAAGRDFSFALTDKGE---LYSWGGNSQNQLGIGGGLAMDVYNIESIPV 324

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           L+E F  L ++ +  AAG  HAA V +DGR+  WG            +    P  + A+N
Sbjct: 325 LVEAFNGLLVKQI--AAGYDHAAAVTEDGRLYMWG-----------AKIWIEPHEMTAVN 371

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           + K   VA G   T  +++DG V++FG G S  LGH       G+R  N L P  + +L 
Sbjct: 372 EHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGH-------GDRK-NQLQPVKIQALA 423

Query: 322 QVN 324
            VN
Sbjct: 424 GVN 426



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 27/312 (8%)

Query: 58  RTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 111
           RT   +    VY +G  + G+       + G++      +P+L E+L+   +     G  
Sbjct: 61  RTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGAS 120

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALA 170
            +A +  EG++Y +     ++LG   E +++E  P  +  L+ I +V ++ G  Y  A  
Sbjct: 121 HSAAIDEEGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGIKIVDVSCG-DYFTAAV 178

Query: 171 CQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            +   M  YS G G       G LGH    DE  PRL+       +    V  G +H   
Sbjct: 179 DEDGKM--YSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + +DG +  WG G YG LG+G  +   VP+ ++  +    + +A G   +F +++ G++Y
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELY 296

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           S+G      LG   I  G      N+ + P LV +   +   V QI+         H  A
Sbjct: 297 SWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGL--LVKQIAAGYD-----HAAA 346

Query: 345 LTESGKLYAFGA 356
           +TE G+LY +GA
Sbjct: 347 VTEDGRLYMWGA 358



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 31/208 (14%)

Query: 31  GREVNGTPLYCRSLQGIR------IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GR  NG    C   + I       ++  AAG   +  ++D G++Y++G +S  + + G+ 
Sbjct: 252 GRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNS--QNQLGIG 309

Query: 85  G------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
           G        + + P LVE+   + V Q A G    A ++ +GR+Y   WG  A++     
Sbjct: 310 GGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYM--WG--AKIW---- 361

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
              +EPH +    E+  + Q+A G  Y + L        V++ G G    LGHG R ++ 
Sbjct: 362 ---IEPHEMTAVNEH-KMTQVACGRQYTVGLTDDGK---VFTFGKGSSNCLGHGDRKNQL 414

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            P  I+    +N+    V+ G +H   +
Sbjct: 415 QPVKIQALAGVNITS--VSCGDYHMGAI 440



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 14/137 (10%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           +   P+   +  G+ + Q AAG      +++ G++Y +G              K+   P 
Sbjct: 319 IESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWG-------------AKIWIEPH 365

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            + ++    + Q A G  +T  L+ +G+V+TF  G+   LGH    N ++P  +   L  
Sbjct: 366 EMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQ-ALAG 424

Query: 154 IPVVQIAAGYCYLLALA 170
           + +  ++ G  ++ A+A
Sbjct: 425 VNITSVSCGDYHMGAIA 441


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 152/319 (47%), Gaps = 27/319 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  + G   T L++  G+V+ FG +++G+   G+  TK VT P  ++SLK   V Q A
Sbjct: 26  KVLHISCGDEHTSLLAGDGRVFTFGDNAWGQ--LGLGHTKPVTKPTRIKSLKAEKVHQVA 83

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   T + +  G++Y+F   ND +LG   +   V    ++  LE+  V  ++AG  +  
Sbjct: 84  CGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSC 143

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            L  + S   VY  G G  G+LG G   T  + P  ++    ++ + V +A G +H A+V
Sbjct: 144 VLTDKGS---VYLWGGGEEGQLGFGEDVTKHETPERLD----VDDEVVCIACGYYHTALV 196

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
              G++ T+G    G LG G++  ++ +PKVV  + +   + VA G   T  ++    VY
Sbjct: 197 TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAIT-GWLVY 254

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +FG G S  LGH       GN      TP  +   K    R              HT  +
Sbjct: 255 TFGNGSSGQLGH-------GNMLLQADTPHKIVWQKPTKVRSASCG-------ENHTALV 300

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T+ G+L+  G G  G+L +
Sbjct: 301 TDRGQLWTCGDGRHGKLAL 319



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 22/281 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  ++ Q A G   T+L +++G++Y+FG ++  +   G+   K V SP +++ 
Sbjct: 68  PTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEK-VCSPTVIKG 126

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 156
           L++  V   + G + + VL+ +G VY +  G + +LG      DV  H     L+ +  V
Sbjct: 127 LESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGF---GEDVTKHETPERLDVDDEV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVV 215
           V IA GY Y  AL    +G  + + G    GKLG GS T D   P++++  +      V 
Sbjct: 184 VCIACGY-YHTALV--TAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIE---GHVVS 237

Query: 216 VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDY 273
           VA G  H  A+ G    V T+G G  G LGHGN   ++  P  +      K    + G+ 
Sbjct: 238 VACGGAHTVAITGW--LVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGEN 295

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
            T +V++ G +++ G G      H  +A G+ N  AN   P
Sbjct: 296 HTALVTDRGQLWTCGDGR-----HGKLALGEEN-FANQFKP 330



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 16/178 (8%)

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
           +F +   + + ++ G  H +++  DGRV T+G   +G LG G+ +  + P  +++L   K
Sbjct: 19  KFWIREDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEK 78

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
              VA G   T + +E G +YSFGC     L       G G     V +P   T +K + 
Sbjct: 79  VHQVACGRSHTLLATESGKIYSFGCNNDRQL-------GLGLDDEKVCSP---TVIKGLE 128

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
              V++ L+  +Y   H+  LT+ G +Y +G G++GQLG     + T+   PER+D+D
Sbjct: 129 SHAVKM-LSAGMY---HSCVLTDKGSVYLWGGGEEGQLGFG--EDVTKHETPERLDVD 180



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 21/218 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   + L+   +   +AG   + +++D G VY +G    G+  +G   TK  T  +L  
Sbjct: 120 SPTVIKGLESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDV 179

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             +   VV  A G + TA+++  G++ TF   ++ +LG  ++  D     ++  +E   V
Sbjct: 180 DDE---VVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HV 235

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS---RTDEKHPRLIEQFQLLNLQP 213
           V +A G  + +A+    +G  VY+ G G  G+LGHG+   + D  H +++ Q      +P
Sbjct: 236 VSVACGGAHTVAI----TGWLVYTFGNGSSGQLGHGNMLLQADTPH-KIVWQ------KP 284

Query: 214 VVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
             V   + G  H A+V   G++ T G GR+G L  G E
Sbjct: 285 TKVRSASCGENHTALVTDRGQLWTCGDGRHGKLALGEE 322


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 27/275 (9%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----EAEYGVQGTKL 88
           +   +P +  +L G++I+QAA G    + + D G+ YA+G + +G    E E    GT+ 
Sbjct: 80  KTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRA 139

Query: 89  VTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE--- 143
           +    P        + V Q A G   + VL++EG V+T+        G    P D++   
Sbjct: 140 LRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTW--------GQPWPPGDIKNIS 191

Query: 144 -PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  + G LE + +  IA G  + LAL+       +++ G    G+LG G       P  
Sbjct: 192 TPVRVQG-LEQVSM--IAVGAFHNLALSVD---RILWAWGNNEYGQLGIGDTQPRSQPIR 245

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALN 261
           +E   L NL  V +AAG WH+A + ++G V  WG G +G LG G+++    VP  VQ L 
Sbjct: 246 VE--GLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLA 303

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
               + V+ G   + V++ DG ++S+G G+   LG
Sbjct: 304 GEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLG 338



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 164/351 (46%), Gaps = 42/351 (11%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L    +    AG+  ++ I D G ++ +G +  G   +  + TK  +SP  V++L  + 
Sbjct: 37  ALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPE-TKTESSPAHVDALVGVK 95

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----------PHPLLGTLE 152
           +VQAAIG +    +  +GR Y  +WG +       EP   E          P P    L+
Sbjct: 96  IVQAAIGGWHCLAVDDKGRAY--AWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALK 153

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            + V Q+AAG  + + L  +     V++     G     G   +   P  ++  + +++ 
Sbjct: 154 -LKVRQVAAGGTHSVVLTQEGH---VWT----WGQPWPPGDIKNISTPVRVQGLEQVSM- 204

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +A GA+H   +  D  +  WG   YG LG G+ +  S P  V+ L+++  + +A G 
Sbjct: 205 ---IAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGG 261

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
           + +  ++++G+VY++G GE   LG        G+  ++ + P  V  L    E +VQ+S 
Sbjct: 262 WHSAALTKEGEVYAWGRGEHGRLGF-------GDDKSSHMVPLQVQLL--AGEDIVQVSC 312

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
             +     H+  LT  G+++++G GD G+LG      +   G+P  V I+L
Sbjct: 313 GGT-----HSVVLTSDGRIFSYGRGDHGRLGD---GRKVTTGHPMEVPINL 355



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 1/114 (0%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N   G+  +   +    P+    L  + ++  AAG   +  ++  G+VYA+G+   G   
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLG 285

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           +G   +  +  P  V+ L    +VQ + G   + VL+ +GR++++  G+  RLG
Sbjct: 286 FGDDKSSHMV-PLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLG 338



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG G  + +   + + AL+      V  G   +  + +DG ++++G  +
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQ 69

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        +P  V +L  V  ++VQ ++     W  H  A+ + G+ 
Sbjct: 70  RGTLGHPPETKTES-------SPAHVDAL--VGVKIVQAAIGG---W--HCLAVDDKGRA 115

Query: 352 YAFGAGDKGQLGIE 365
           YA+G  + GQ G E
Sbjct: 116 YAWGGNEYGQCGEE 129


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 20/282 (7%)

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
           G++ +    SP+++E+ +   + +   G   +A + +EG++YT+      +LGH +   D
Sbjct: 27  GIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQD 86

Query: 142 VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG-----GKLGHGSRT 195
           ++  P ++  L  I +V I+ G  +  A+  +     +++ G G       G LGH    
Sbjct: 87  IQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK---LFTWGWGGSTMKGSGALGHAGGE 143

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           DE  PRL+       +    V  G  H   + +DG +  WG G YG LG+G  +   VP+
Sbjct: 144 DESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPE 203

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-P 314
            V+   D     ++ G   TF ++E G+VYS+G    + LG   +  G    + N+ T P
Sbjct: 204 PVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLG---LGGGLTVDYYNMETIP 260

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
            +V +L  VN  V Q+S         H  A+T  GK++ +GA
Sbjct: 261 VVVEALSNVN--VAQVSAGYD-----HAAAVTNDGKMFMWGA 295



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 45/340 (13%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    + +G  I +   GA  +  I   G++Y +G + + +  +G     + + P++V+
Sbjct: 36  SPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVD 95

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR-----LGHHTEPNDVEPHPLLGTL 151
           +L+ I +V  + G + T  +  EG+++T+ WG         LGH    ++  P  L+ TL
Sbjct: 96  ALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPR-LVRTL 154

Query: 152 --ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
             + +PV  +  G  + +AL        +++ G G  G+LG+G+  + + P  +E F   
Sbjct: 155 VDQGVPVKSVECGELHTVALTKDGE---IWAWGNGEYGRLGNGASDNFEVPEPVEYFADE 211

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN------EECESVPKVVQALNDV 263
           N+    ++AG      + + G V +WG   +  LG G          E++P VV+AL++V
Sbjct: 212 NIAS--ISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNV 269

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V+ G      V+ DG ++ +G    A L                L P  +T LK  
Sbjct: 270 NVAQVSAGYDHAAAVTNDGKMFMWG----AKL---------------WLEPHEMTILK-- 308

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +E ++ +          +T AL+ SG L+ FG G    LG
Sbjct: 309 DETIISVQCG-----RYYTAALSASGNLFTFGKGHSNCLG 343



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 38/266 (14%)

Query: 116 LSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +S +  V+T+  G   +LGH         +   ++ P  +L T E   + ++  G  +  
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPR-ILETFEGKNIAKLDFGATHSA 59

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAV 225
           A+  +     +Y+ G     +LGHGS   +    PR+++   L  ++ V ++ G +H   
Sbjct: 60  AIDKEGK---LYTWGSNEYHQLGHGSSNQDIQSIPRVVDA--LRGIKIVDISCGEYHTGA 114

Query: 226 VGQDGRVCTWGWGRY-----GCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVV 278
           V ++G++ TWGWG       G LGH   E ES+P++V+ L D  V    V  G+  T  +
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           ++DG+++++G GE   LG N  +D       N   P+ V      +E +  IS       
Sbjct: 175 TKDGEIWAWGNGEYGRLG-NGASD-------NFEVPEPVEYF--ADENIASISAGRDF-- 222

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGI 364
              TFA+TE G++Y++G     QLG+
Sbjct: 223 ---TFAITEHGEVYSWGINSHSQLGL 245



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 58/292 (19%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKL 88
           +++   P    +L+GI+I+  + G   T  + + G+++ +G       G    G  G + 
Sbjct: 85  QDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGED 144

Query: 89  VTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
            + P+LV +L  + + V     G   T  L+++G ++ +  G   RLG+    N   P P
Sbjct: 145 ESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEP 204

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC------GLGGKLGHGSRTDEKHP 200
           +     +  +  I+AG  +  A+        VYS G       GLGG L       E  P
Sbjct: 205 VE-YFADENIASISAGRDFTFAITEHGE---VYSWGINSHSQLGLGGGLTVDYYNMETIP 260

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG---W-------------------G 238
            ++E   L N+    V+AG  HAA V  DG++  WG   W                   G
Sbjct: 261 VVVEA--LSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCG 318

Query: 239 RY-------------------GCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           RY                    CLGHG  + +  P +V++LN    + +  G
Sbjct: 319 RYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCG 370



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L  + + Q +AG      +++ G+++ +G              KL   P  +  
Sbjct: 260 PVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG-------------AKLWLEPHEMTI 306

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+  ++    G ++TA LS  G ++TF  G+   LGH      ++P  L+ +L    VV
Sbjct: 307 LKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQP-LLVESLNRYNVV 365

Query: 158 QIAAGYCYLLALACQPSGMAV 178
            +  GY ++ AL  +P   AV
Sbjct: 366 SMTCGYSHMGAL-TKPFAEAV 385


>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 30/272 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           +++  P       G+RI+  AAG   T+ +SD GQV+ +G    G+   G +  +LV+SP
Sbjct: 214 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSP 272

Query: 93  QLVESLK------------------------NIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
             +  ++                          +V + A G   +AV++  G + TF WG
Sbjct: 273 HPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGALLTFGWG 332

Query: 129 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 188
              + G  +  +++ P   + +L  I + ++AAG  + +   C  +   VYS G    G+
Sbjct: 333 LYGQCGQGSTDDELSPT-CVSSLLGIRIEEVAAGLWHTI---CASADGDVYSFGGNQFGQ 388

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           LG G    E  P+L+E   L N+   +++ GA H AV+  +G+V  WGW +YG LG G+ 
Sbjct: 389 LGTGCDQAETLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDV 448

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
              + P  V+ + D    ++A G + T ++ +
Sbjct: 449 IDRNAPSEVR-IKDCVPKNIACGWWHTLLLGQ 479



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 122/293 (41%), Gaps = 55/293 (18%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGT 150
           P LV     + +V  A G   T  LS  G+V+ + +G + +LG  +    V  PHP    
Sbjct: 219 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHP---- 274

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
              IP ++              PS               G  + +       ++  ++L 
Sbjct: 275 ---IPCIE--------------PS-------------SYGKATSSGVNMSSEVQCARVLG 304

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                +A G  H+AV+   G + T+GWG YG  G G+ + E  P  V +L  ++   VA 
Sbjct: 305 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 364

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS--LKQVNERVV 328
           G + T   S DGDVYSFG  +   L       G G   A  L P+L+ +  L+ VN +++
Sbjct: 365 GLWHTICASADGDVYSFGGNQFGQL-------GTGCDQAETL-PKLLEAPNLENVNVKII 416

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                       HT  + + GK++ +G    GQLG+    +  +R  P  V I
Sbjct: 417 SCGAR-------HTAVIADEGKVFCWGWNKYGQLGL---GDVIDRNAPSEVRI 459


>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 424

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 43/366 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SLQ   I   A G G T+ ++  GQVY+ G   +G+   G+   K V    L++S
Sbjct: 64  PKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQL--GLGSLKEVEGITLIDS 121

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL--ENIP 155
           +    V+  A G+  +  ++ +G +Y+  +G    LG  T    +E   L+ +L  E   
Sbjct: 122 IPEK-VITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLAREEEK 180

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS--------------RTDEKHPR 201
           ++++AAG+ + +AL+   SG  VYS G    G LGHG               R  E  PR
Sbjct: 181 IIKVAAGHGFSIALS--ESG-KVYSFGSANDGHLGHGEVPGGIFLWEPFHSHRNMETSPR 237

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           LI   +   ++   ++ G+ HA  + ++G    WG GRY C    NE     P+ +  L 
Sbjct: 238 LIRALEKEQME--YISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHLP 295

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
                 + +G   T  +++ G V+++G      L       G G +  +   P++V  L 
Sbjct: 296 GPWK-QIVSGGAHTLGLTKGGQVWAWGVNHFGCL-------GVGEQRTSPGEPRIVEKLL 347

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI-------ELVNNQTERG 374
           Q  +  +Q       +    + A+   G +Y++G G  G LG        E V  Q E+G
Sbjct: 348 QQAKEPIQWIAAGWFF----SMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQG 403

Query: 375 NPERVD 380
            P +VD
Sbjct: 404 EPLQVD 409



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 48/337 (14%)

Query: 68  VYAFGKDSFG--------EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           VYA+G    G        E E  V G   V  P++V SL+N  +   A G  FT  ++++
Sbjct: 32  VYAWGNSDGGWTGHLPSEEYEDHVSGATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQ 91

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G+VY+   G   +LG  +   +VE   L+ ++    V+  AAG  + L +  Q     +Y
Sbjct: 92  GQVYSSGVGRYGQLGLGS-LKEVEGITLIDSIPE-KVITCAAGDRHSLFVTEQGH---LY 146

Query: 180 SVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           S G G  G+LG G  SR  E  P+L+E       + + VAAG   +  + + G+V ++G 
Sbjct: 147 SCGYGKRGELGLGTISRRMET-PQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGS 205

Query: 238 GRYGCLGHG--------------NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
              G LGHG              +   E+ P++++AL   +  +++ G    F ++++G 
Sbjct: 206 ANDGHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGV 265

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            + +GCG      H    D +     N   PQ +  L    +++V           AHT 
Sbjct: 266 AFGWGCGRY----HCFATDNE----VNWEQPQALFHLPGPWKQIVSG--------GAHTL 309

Query: 344 ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            LT+ G+++A+G    G LG+     +T  G P  V+
Sbjct: 310 GLTKGGQVWAWGVNHFGCLGVG--EQRTSPGEPRIVE 344



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 27/255 (10%)

Query: 25  GKRNLLG-----REVNGTPLYCRSL--QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           GKR  LG     R +  TP    SL  +  +II+ AAG G ++ +S++G+VY+FG  + G
Sbjct: 151 GKRGELGLGTISRRME-TPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSANDG 209

Query: 78  EAEYG-VQG-----------TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
              +G V G             + TSP+L+ +L+   +   + G+     +++EG  + +
Sbjct: 210 HLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGW 269

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
             G         E N  +P  L       P  QI +G  + L L     G  V++ G   
Sbjct: 270 GCGRYHCFATDNEVNWEQPQALFHLPG--PWKQIVSGGAHTLGLT---KGGQVWAWGVNH 324

Query: 186 GGKLGHGS-RTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G LG G  RT    PR++E+      +P+  +AAG + +  V  +G V +WG G  G L
Sbjct: 325 FGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGYVYSWGRGHAGAL 384

Query: 244 GHGNEECESVPKVVQ 258
           G G EE +  P  +Q
Sbjct: 385 GTGEEEDKWEPVAIQ 399


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 33/271 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL-- 94
           TP       G+RI   AAG   T+ +SD GQV+ +G    G+   G +  K+V+SP L  
Sbjct: 198 TPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSR-VKMVSSPHLIP 256

Query: 95  -------------------------VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
                                    V +    +V + A G   +AV++  G + TF WG 
Sbjct: 257 FTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGL 316

Query: 130 DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
             + GH +  + + P  L  +L  I + +IAAG  + + +        VY  G    G+L
Sbjct: 317 YGQCGHGSTNDQLRPTSLP-SLSGIQIERIAAGLWHTMCITIDGR---VYVFGGNQFGQL 372

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G G+   E  PRL+E   L +    +V+ GA H+A++ +DG+V +WGW +YG LG G+  
Sbjct: 373 GTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSI 432

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
             + P  V  +   +   VA G + T +++E
Sbjct: 433 DRNTPTQV-PIEGCRPKMVACGWWHTLLLAE 462



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR----------------TDE 197
           + +  +AAG  + LAL+       V+  G G  G+LG GSR                T  
Sbjct: 208 VRITSVAAGGRHTLALS---DTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFTEQPTTG 264

Query: 198 KHPRLIEQFQLLNLQPVV----------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           KH   +      NL   V          +A G  H+AVV   G + T+GWG YG  GHG+
Sbjct: 265 KHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGS 324

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
              +  P  + +L+ ++   +A G + T  ++ DG VY FG  +   LG  A    QG  
Sbjct: 325 TNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGA---SQGET 381

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
              +L    + S      ++V++    +     H+  L E G+++++G    GQLG   V
Sbjct: 382 LPRLLEDPCLES------KLVKMVSCGA----RHSAILLEDGQVFSWGWNKYGQLG---V 428

Query: 368 NNQTERGNPERVDID 382
            +  +R  P +V I+
Sbjct: 429 GDSIDRNTPTQVPIE 443



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL GI+I + AAG   TM I+  G+VY FG + FG  + G   ++  T P+L+E 
Sbjct: 331 PTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFG--QLGTGASQGETLPRLLED 388

Query: 98  --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             L++  V   + G   +A+L  +G+V+++ W    +LG     +   P  +   +E   
Sbjct: 389 PCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQV--PIEGCR 446

Query: 156 VVQIAAGYCYLLALACQP 173
              +A G+ + L LA  P
Sbjct: 447 PKMVACGWWHTLLLAETP 464


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 31/300 (10%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
           ++++S+  +V+ +G +S  +   G Q   L+  P++  S      ++A  G + T V+S 
Sbjct: 368 SLVVSENSEVFVWGSNSSHQLAEGSQEKILL--PKMAISFAESQQIEA--GQYCTFVISS 423

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC---YLLALACQPSG 175
           +G V     G+  RLG     N  +   L    +N  + +I++      + LAL  +   
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSEGQ- 480

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             V+S G G  GKLGHG+   +K+P++I    L+    V ++AG  H+A V  DG++ TW
Sbjct: 481 --VFSWGDGDYGKLGHGNTLTQKYPKVILGV-LMGKVVVCISAGYRHSACVTDDGQLYTW 537

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 294
           G G YG LGHG+    +VP +V+ +++V    V  G   T  VS+D   V+SFG G++  
Sbjct: 538 GEGDYGRLGHGDSNSRNVPTLVKDVSNVG--KVVCGSSHTIAVSQDSRTVWSFGGGDNGK 595

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G  NR   +  P+++ SL  +  + V     +S+       ALT +G+L  F
Sbjct: 596 LGH-----GDTNR---IYKPKIIESLIGLFIKKVGCGSQSSL-------ALTSTGQLCTF 640



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 41/250 (16%)

Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG-YCYLLALACQPSGMAVYSV 181
           F WG+++  +L   ++   + P   +   E+    QI AG YC  +      S  +V + 
Sbjct: 378 FVWGSNSSHQLAEGSQEKILLPKMAISFAES---QQIEAGQYCTFVI----SSDGSVRAC 430

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA------AGAWHAAVVGQDGRVCTW 235
           G G  G+LG G   ++       Q + LN    ++           H   +  +G+V +W
Sbjct: 431 GKGSYGRLGLGDSNNQT------QLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSW 484

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 294
           G G YG LGHGN   +  PKV+  +   K +   +  Y  +  V++DG +Y++G G+   
Sbjct: 485 GDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGR 544

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYA 353
           LGH     G  N   NV  P LV  +  V + V           ++HT A+++  + +++
Sbjct: 545 LGH-----GDSNSR-NV--PTLVKDVSNVGKVVCG---------SSHTIAVSQDSRTVWS 587

Query: 354 FGAGDKGQLG 363
           FG GD G+LG
Sbjct: 588 FGGGDNGKLG 597



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 10/189 (5%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 106
           RI  +    G T+ ++  GQV+++G   +G+  +G   T+    P+++   L    VV  
Sbjct: 461 RISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQ--KYPKVILGVLMGKVVVCI 518

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           + G   +A ++ +G++YT+  G+  RLG H + N      L+  + N+  V   + +   
Sbjct: 519 SAGYRHSACVTDDGQLYTWGEGDYGRLG-HGDSNSRNVPTLVKDVSNVGKVVCGSSH--- 574

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
             +A       V+S G G  GKLGHG       P++IE   L+ L    V  G+  +  +
Sbjct: 575 -TIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIE--SLIGLFIKKVGCGSQSSLAL 631

Query: 227 GQDGRVCTW 235
              G++CT+
Sbjct: 632 TSTGQLCTF 640



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           ++ VV ++  V  WG      L  G++E   +PK+  A++  ++  +  G Y TFV+S D
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSD 424

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNA 340
           G V + G G    LG      G  N           T LK++N +  +   +++S   + 
Sbjct: 425 GSVRACGKGSYGRLGL-----GDSNNQ---------TQLKKLNFDNSIITRISSSKGSDG 470

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           HT ALT  G+++++G GD G+LG
Sbjct: 471 HTLALTSEGQVFSWGDGDYGKLG 493



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 26/191 (13%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+  G     +L  GS+     P++   F     +   + AG +   V+  DG V   G 
Sbjct: 377 VFVWGSNSSHQLAEGSQEKILLPKMAISFA----ESQQIEAGQYCTFVISSDGSVRACGK 432

Query: 238 GRYGCLGHGNEECESVPKVVQALNDV-KAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 295
           G YG LG G+   ++  K +   N +   I  + G D  T  ++ +G V+S+G G+   L
Sbjct: 433 GSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKL 492

Query: 296 GHNAIADGQGNRHANVLT---PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
           GH            N LT   P+++  +  + + VV IS         H+  +T+ G+LY
Sbjct: 493 GH-----------GNTLTQKYPKVILGV-LMGKVVVCISAGYR-----HSACVTDDGQLY 535

Query: 353 AFGAGDKGQLG 363
            +G GD G+LG
Sbjct: 536 TWGEGDYGRLG 546



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G  ++  +AG   +  ++D GQ+Y +G+  +G   +G   ++ V  P LV+ + N+  
Sbjct: 510 LMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNV--PTLVKDVSNVGK 567

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V    G+  T  +S++ R V++F  G++ +LG H + N +    ++ +L  + + ++  G
Sbjct: 568 V--VCGSSHTIAVSQDSRTVWSFGGGDNGKLG-HGDTNRIYKPKIIESLIGLFIKKVGCG 624

Query: 163 YCYLLAL 169
               LAL
Sbjct: 625 SQSSLAL 631


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 164/331 (49%), Gaps = 33/331 (9%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
           L+ ++ +   ++   AG   + ++   G V+  G+++ G+   G +  K  +    V+ L
Sbjct: 26  LFPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTE--KDSSYFGKVDEL 83

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPV 156
            ++  + + + +  T  +++ G V+   WG +++ G  TE   N   P  + G  +   +
Sbjct: 84  YDVVSLDSDMDH--TLAITKHGTVW--GWGYNSK-GEITEGGKNIARPVQINGLKD---I 135

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           VQ++ G  + LAL    SG AV+S G  + G+LG+G+  D   P  +E    +    V +
Sbjct: 136 VQVSTGLVHSLAL--DQSG-AVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNI----VAI 188

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            AGA H+  +  DG+V  WG   +G LG+G  E  ++P++V+ L +++ I  A GD  + 
Sbjct: 189 EAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMI--AGGDNHSL 246

Query: 277 VVSEDGDVYSFGCGESASLGHNAI----ADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
            +  DG ++++G   +  +G  +      DGQ     N   P     L  +  +V Q+S 
Sbjct: 247 ALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEP---VKLNGLYGKVKQVSA 303

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   H+ ALTE+G++YA+G  + GQLG
Sbjct: 304 GIK-----HSTALTENGEVYAWGWNEYGQLG 329



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 52/371 (14%)

Query: 10  HLSPILRPDIINERNGKRNLLGREVNGT----PLYCRSLQGIRIIQAAAGAGRTMLISDA 65
           ++S ILR D      G RN +G+  NGT      + +  +   ++   +    T+ I+  
Sbjct: 44  YVSTILRSDGTVWTTG-RNNVGQLGNGTEKDSSYFGKVDELYDVVSLDSDMDHTLAITKH 102

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G V+ +G +S GE     +G K +  P  +  LK+I  VQ + G   +  L + G V+  
Sbjct: 103 GTVWGWGYNSKGEI---TEGGKNIARPVQINGLKDI--VQVSTGLVHSLALDQSGAVW-- 155

Query: 126 SWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           SWG +   +LG+ T  +   P  +   L NI  V I AG  + LAL+       V++ G 
Sbjct: 156 SWGENIYGQLGNGTNQDSSIPTKVE-FLSNI--VAIEAGAEHSLALSNDGK---VWAWGR 209

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
              G+LG+G       PRL++  + + +    +A G  H+  +  DG +  WG+   G +
Sbjct: 210 NEFGQLGNGETEKSNIPRLVKNLENIEM----IAGGDNHSLALDHDGAIWAWGYNSNGQI 265

Query: 244 GHGNEEC-ESVPKVVQALNDV----------KAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           G G+    E   ++ +  N            K   V+ G   +  ++E+G+VY++G  E 
Sbjct: 266 GDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEY 325

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG+ ++ D +            V     V   ++ I   +      H+FA+ ESG +Y
Sbjct: 326 GQLGNGSMKDSK------------VPLRNNVGRSIIDIETGS-----YHSFAVDESGVIY 368

Query: 353 AFGAGDKGQLG 363
           A+G    GQLG
Sbjct: 369 AWGDATYGQLG 379



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 143/297 (48%), Gaps = 41/297 (13%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+Q + G   ++ +  +G V+++G++ +G+   G      +  P  VE L NI  ++A  
Sbjct: 135 IVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI--PTKVEFLSNIVAIEA-- 190

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G   +  LS +G+V+ +      +LG+  TE +++ P  L+  LENI +  IA G  + L
Sbjct: 191 GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNI-PR-LVKNLENIEM--IAGGDNHSL 246

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVV----------V 216
           AL       A+++ G    G++G GS    EK  +L E+      +PV           V
Sbjct: 247 ALDHDG---AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRN--KTEPVKLNGLYGKVKQV 301

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYT 274
           +AG  H+  + ++G V  WGW  YG LG+G+ +   VP      N+V    I + TG Y 
Sbjct: 302 SAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVP----LRNNVGRSIIDIETGSYH 357

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           +F V E G +Y++G      LG        GNR         +T + ++N  V++I+
Sbjct: 358 SFAVDESGVIYAWGDATYGQLGDGTFGK-DGNR---------ITYMVRMNPIVIKIN 404


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 146/331 (44%), Gaps = 41/331 (12%)

Query: 50  IQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +QA A G     L++  G+V+++G++  G   +GV     V+ P+ V+ LKN  V   A 
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNFNVELVAC 364

Query: 109 GNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           G + +  ++  G +Y   WG +A     LG  +E     P  L G LE I V  ++ G  
Sbjct: 365 GEYHSCAVTLSGDLYI--WGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPW 422

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   +    S   +++ G G  G LGHG R     PR +E   L  L+ +  A G WH A
Sbjct: 423 HTAVVT---SAGQLFTFGDGTFGVLGHGDRISVSIPREVES--LKGLRTMRAACGVWHTA 477

Query: 225 VVGQ------------DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V +             G++ TWG G    LGHG++E   VP  V  L +     VA G 
Sbjct: 478 AVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGH 537

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  ++  G VY+ G      LG N  ADG        + P  V    ++ +  V+  L
Sbjct: 538 SLTAALTTTGQVYTMGSPVYGQLG-NPQADG--------MLPTRVEG--KLMKNFVE-EL 585

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               Y   H   LT   ++Y +G G  G+LG
Sbjct: 586 ACGAY---HVAVLTSRTEVYTWGKGANGRLG 613



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 40/313 (12%)

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP 139
           GVQ    V  P+ +ES   + V   A G    A+++++G V  FSWG +   RLGH  + 
Sbjct: 288 GVQMDSFV--PKALESAVLLDVQAIACGRQHAALVTKQGEV--FSWGEELGGRLGHGVD- 342

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           +DV     +  L+N  V  +A G  +  A+      + ++       G LG GS   +  
Sbjct: 343 SDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS-GDLYIWGGNAYNFGLLGCGSEATQWV 401

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           PR ++   L  +    V+ G WH AVV   G++ T+G G +G LGHG+    S+P+ V++
Sbjct: 402 PRKLDG-PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVES 460

Query: 260 LNDVKAIHVATGDYTTFVVSE------------DGDVYSFGCGESASLGHNAIADGQGNR 307
           L  ++ +  A G + T  V E             G ++++G G+   LGH       G++
Sbjct: 461 LKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGH-------GDK 513

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
            A  L P  V +L + N    Q++  +S+     T ALT +G++Y  G+   GQLG    
Sbjct: 514 EAR-LVPTCVATLVEPN--FCQVACGHSL-----TAALTTTGQVYTMGSPVYGQLG---- 561

Query: 368 NNQTERGNPERVD 380
           N Q +   P RV+
Sbjct: 562 NPQADGMLPTRVE 574



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 20/247 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+GI +   + G   T +++ AGQ++ FG  +FG   +G + +  V+ P+ VESLK +  
Sbjct: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS--VSIPREVESLKGLRT 466

Query: 104 VQAAIGNFFTAVL------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           ++AA G + TA +               G+++T+  G+  RLGH  +   + P   + TL
Sbjct: 467 MRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPT-CVATL 525

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                 Q+A G+    AL    +   VY++G  + G+LG+  + D   P  +E   + N 
Sbjct: 526 VEPNFCQVACGHSLTAALT---TTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNF 581

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              + A GA+H AV+     V TWG G  G LGHG+ +  + P VV+AL D +   +  G
Sbjct: 582 VEEL-ACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCG 640

Query: 272 DYTTFVV 278
              T  +
Sbjct: 641 TSFTAAI 647



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 14/174 (8%)

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G G + D   P+ +E   LL++Q   +A G  HAA+V + G V +WG    G LGHG + 
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQ--AIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDS 343

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
             S PK V  L +     VA G+Y +  V+  GD+Y +G G + + G      G G+   
Sbjct: 344 DVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWG-GNAYNFG----LLGCGSEAT 398

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             +  +L   L+ ++     +S  +   W  HT  +T +G+L+ FG G  G LG
Sbjct: 399 QWVPRKLDGPLEGIH-----VSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLG 445



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E    P    +L      Q A G   T  ++  GQVY  G   +G+         L   
Sbjct: 513 KEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML--- 569

Query: 92  PQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           P  VE  L   FV + A G +  AVL+    VYT+  G + RLG H + +D     ++  
Sbjct: 570 PTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG-HGDADDRNSPSVVEA 628

Query: 151 LENIPVVQIAAGYCYLLAL 169
           L++  V  I  G  +  A+
Sbjct: 629 LKDKQVKGIVCGTSFTAAI 647


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 67/358 (18%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +IQ   G   T+ ++  G+VY+ G + F +  +G  G +L      V +L++  ++  A 
Sbjct: 44  LIQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQLAK----VVALEHYRIISVAC 99

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G +  A ++  G ++T+   ++ +LG   +   V+   L+  L +  VVQ++ G  + L 
Sbjct: 100 GAYHNAAITYNGLLFTWGCNSNGQLGREGDDTGVK---LVRALSDHKVVQVSLGVEHTLV 156

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG 227
           L        V++ G  L G+LG G  + E+   + +Q   L+  PV  + AG WH+ V+ 
Sbjct: 157 LT---DTARVFAFGSNLKGQLGLG-YSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLT 212

Query: 228 QDGRVCTWGWGRYGCLG----------HGNE---ECESV--------------------- 253
             G +  WG   YG LG          H NE   +C SV                     
Sbjct: 213 VSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTS 272

Query: 254 ------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
                 P  V+ L   + +++A G+  T  ++ DG V++FG G    LGHN    G    
Sbjct: 273 LSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIG---- 328

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGI 364
              +  P+ +T    +   V QI+         HT AL  ++G+L+AFG G   QLG+
Sbjct: 329 ---ISVPRKITEF--MGNVVTQIACG-----RFHTLALVPKTGRLFAFGQGTNAQLGM 376



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLE--NIP-VVQIAAGYCYLLALACQPSGMAVYSV 181
           F+WG+        + ND     +   L+  N+P ++QI  GY + + L        VYS 
Sbjct: 10  FAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGE---VYSC 66

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           GC    +LGHG    +   +L +   L + + + VA GA+H A +  +G + TWG    G
Sbjct: 67  GCNEFQQLGHG----QSGGQLAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNG 122

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LG   ++  +  K+V+AL+D K + V+ G   T V+++   V++FG      LG    +
Sbjct: 123 QLGREGDD--TGVKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSS 180

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           +       +V  PQ +  L  +  R +       +    H+F LT SG LYA+G+ + GQ
Sbjct: 181 E------QSVSIPQQILCLSGLPVRRI-------VAGGWHSFVLTVSGSLYAWGSNNYGQ 227

Query: 362 LGI 364
           LG+
Sbjct: 228 LGL 230



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 41/333 (12%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           M+ S   +++A+G    G+          +  P+ ++      ++Q   G   T  L+ +
Sbjct: 1   MVSSATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTID 60

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           G VY+       +LGH      +     +  LE+  ++ +A G  +  A+    +G+ ++
Sbjct: 61  GEVYSCGCNEFQQLGHGQSGGQLAK---VVALEHYRIISVACGAYHNAAITY--NGL-LF 114

Query: 180 SVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + GC   G+LG  G  T  K  R +   ++     V V+ G  H  V+    RV  +G  
Sbjct: 115 TWGCNSNGQLGREGDDTGVKLVRALSDHKV-----VQVSLGVEHTLVLTDTARVFAFGSN 169

Query: 239 RYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             G LG G  +E+  S+P+ +  L+ +    +  G + +FV++  G +Y++G      LG
Sbjct: 170 LKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLG 229

Query: 297 HNAIADGQGNRHANVLTPQ---------------------LVTSLKQVNERVVQISL--T 333
            +       N H N LT +                     L TSL  V+      +L   
Sbjct: 230 LSYFGSSP-NDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGC 288

Query: 334 NSIYW---NAHTFALTESGKLYAFGAGDKGQLG 363
             +Y      HT ALT  G ++ FGAG  GQLG
Sbjct: 289 EVVYLACGETHTVALTRDGGVFTFGAGRYGQLG 321



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 45/270 (16%)

Query: 30  LGREVNGTPL-YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LGRE + T +   R+L   +++Q + G   T++++D  +V+AFG +  G+   G    + 
Sbjct: 124 LGREGDDTGVKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQS 183

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH---TEPNDVEPH 145
           V+ PQ +  L  + V +   G + + VL+  G +Y +   N  +LG     + PND +  
Sbjct: 184 VSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNE 243

Query: 146 ------------------------PLLGTLEN--IPVVQIAAGYCYLLALACQPSGMA-- 177
                                   PL  +L N  IP        C ++ LAC  +     
Sbjct: 244 LTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVAL 303

Query: 178 -----VYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVV--VAAGAWHA-AVVGQ 228
                V++ G G  G+LGH   T     PR I +F    +  VV  +A G +H  A+V +
Sbjct: 304 TRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEF----MGNVVTQIACGRFHTLALVPK 359

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            GR+  +G G    LG G+ +   +P  V+
Sbjct: 360 TGRLFAFGQGTNAQLGMGDTKNRLLPCPVK 389



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 19/158 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           + +  G  H   +  DG V + G   +  LGHG    + + KVV AL   + I VA G Y
Sbjct: 45  IQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQ-LAKVV-ALEHYRIISVACGAY 102

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
               ++ +G ++++GC  +  LG     D  G +    L+          + +VVQ+SL 
Sbjct: 103 HNAAITYNGLLFTWGCNSNGQLGREG--DDTGVKLVRALS----------DHKVVQVSLG 150

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
                  HT  LT++ +++AFG+  KGQLG+   + Q+
Sbjct: 151 VE-----HTLVLTDTARVFAFGSNLKGQLGLGYSSEQS 183



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P + ++L+G  ++  A G   T+ ++  G V+ FG   +G+  +      +    ++ E 
Sbjct: 279 PTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEF 338

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           + N+ V Q A G F T A++ + GR++ F  G +A+LG     N + P P+ G
Sbjct: 339 MGNV-VTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVKG 390


>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
          Length = 494

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +  + +   A  ++ I+  G+++++G
Sbjct: 89  IGRKEVPKQQAAFRNL-GQNLWGPHRYGCLNDVQVSCVVSGPCAAHSLFITTEGKLWSWG 147

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK + +P+L+E+L    +V  A G   T  L+ +G VY+F      +
Sbjct: 148 RNDKGQLGHG--DTKRLEAPKLIEALAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQ 205

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D    P L +    P+V++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 206 LGQGNQ-TDAVLTPALISYNGQPLVKVACGAEFSMVVDCKGN---LYSFGCPEYGQLGHN 261

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q++ +  VVV   A GA H  V+    
Sbjct: 262 SDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGANHTLVLDSQK 321

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV TWG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 322 RVFTWGFGGYGRLGHTEQKDEMVPRLVKLFDFPGRGASQIYAGYQCSFAVSEMGGLFFWG 381



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 111 PH-RYGCLNDVQVSCVVSGPCAAHSLFITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 168

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E   L     V VA G  H   + +DG V ++G  + G LG GN+    +   + + N  
Sbjct: 169 EA--LAEHVIVSVACGRNHTLALTEDGAVYSFGENKLGQLGQGNQTDAVLTPALISYNGQ 226

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 319
             + VA G   + VV   G++YSFGC E   LGHN+    IA  Q       L P+ V  
Sbjct: 227 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAI 286

Query: 320 LKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
             + ++    + + N +  +      HT  L    +++ +G G  G+LG
Sbjct: 287 FIEKSKDGQIMPVPNVVVRDVACGANHTLVLDSQKRVFTWGFGGYGRLG 335


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 155/327 (47%), Gaps = 32/327 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++  G+VYA G +   +  + +   +    P L+  L+N  VV  A G+
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKR----PLLIPELQNYVVVAIACGS 95

Query: 111 FFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  L+  G+V   SWG++   +LG  T+ + +E   ++ +L +  VVQIA G  + LA
Sbjct: 96  RHSMALTEWGQV--LSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLA 153

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    S   +YS G  + G+LG     +  H    +    LL +    +A G  H+ ++ 
Sbjct: 154 LT---SCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLIS 210

Query: 228 QDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           +   V  +G+GR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G V+
Sbjct: 211 KSSAV--FGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVF 268

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           + G G    LGH +        + N + P++V  L  +   + Q++  N      HT AL
Sbjct: 269 TCGAGTYGQLGHGS--------NTNEMLPRMVMEL--MGSTITQVACGNR-----HTLAL 313

Query: 346 TES-GKLYAFGAGDKGQLGIELVNNQT 371
             S G++Y FG G  GQLG    N+ T
Sbjct: 314 VPSRGRVYGFGLGSSGQLGNRSTNSVT 340



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 12/224 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQL 94
           P   RSL    ++Q A G   ++ ++  G++Y++G + +G+   GV+  + ++    P  
Sbjct: 130 PKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQL--GVKPPQELSHCNYPLR 187

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           + +L  I +   A G   + ++S+   V+ F   N  +LG + E N   P   L TL  +
Sbjct: 188 LTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQ-LKTLRTL 246

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  +A G  + + L  +     V++ G G  G+LGHGS T+E  PR++   +L+     
Sbjct: 247 GVRFVACGDEFSVFLTNEG---GVFTCGAGTYGQLGHGSNTNEMLPRMV--MELMGSTIT 301

Query: 215 VVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            VA G  H  A+V   GRV  +G G  G LG+ +    ++P+ V
Sbjct: 302 QVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 52/176 (29%)

Query: 235 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  E E +  P  +    D     +A G   T  ++ +G VY+ G  + 
Sbjct: 6   WGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGNNDQ 65

Query: 293 ASLGHN----------------AIADGQGNRHANVLT----------------------- 313
           A LGHN                 +A   G+RH+  LT                       
Sbjct: 66  AQLGHNLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQS 125

Query: 314 ----PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
               P+++ SL  V++ VVQI+  N+     H+ ALT  G+LY++G+   GQLG++
Sbjct: 126 IIELPKIIRSL--VSKHVVQIACGNN-----HSLALTSCGELYSWGSNIYGQLGVK 174



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G    +++  P++V  
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVME 294

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    + Q A GN  T A++   GRVY F  G+  +LG+ +  +   P  +LG
Sbjct: 295 LMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLG 347


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 11/263 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP +  +L   +I   + G   ++ +++ GQV+A+G    G+   G   T  V  P+L++
Sbjct: 73  TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETA-VRIPRLIK 131

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIP 155
            L +  + Q   GN     LS++G+++T+      +LG    EP+ + P PL  +L  IP
Sbjct: 132 RLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPL-KSLAGIP 190

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           + +I AG  +  AL+   SG AV+  G    G+LG     D   P  I   + L  Q VV
Sbjct: 191 LAKITAGGDHSFALSL--SG-AVFGWGKNKAGQLGLNDIQDRAVPCHI---KFLRSQKVV 244

Query: 216 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            ++ G  H A + +DG + T+G G +G LGHG+   E +P+ V  L   +   +  G + 
Sbjct: 245 HISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHH 304

Query: 275 TFVVS-EDGDVYSFGCGESASLG 296
           T   +   G VY+FGC     LG
Sbjct: 305 TLAFAPSSGGVYAFGCNSHGQLG 327



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 151/346 (43%), Gaps = 30/346 (8%)

Query: 24  NGKRNLLGREVNGTPLY----CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
             K   LG  V   P++    C    G  + +   G   ++ +   G VY  G +S G+ 
Sbjct: 6   KAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQL 65

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
            +   G     +P+ V +L    +   + G   +  ++ +G+V+ +  G + +LG  T  
Sbjct: 66  GHNKPGI----TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK- 198
             V    L+  L +  + Q+  G  + +AL+       +++ G    G+LG G     K 
Sbjct: 122 TAVRIPRLIKRLCDHRIAQVMCGNQHCIALS---KDGQLFTWGQNTSGQLGLGKGEPSKL 178

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+ ++    + L  +   AG  H+  +   G V  WG  + G LG  + +  +VP  ++
Sbjct: 179 FPQPLKSLAGIPLAKI--TAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIK 236

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L   K +H++ G+  T  +++DG +++FG G    LGH +         AN L P+ V 
Sbjct: 237 FLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGST--------ANELLPRRV- 287

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
            L+ +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 288 -LELMGTEVSQITCGRH-----HTLAFAPSSGGVYAFGCNSHGQLG 327



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 5/163 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL GI + +  AG   +  +S +G V+ +GK+  G+   G+   +    P  ++ 
Sbjct: 180 PQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQ--LGLNDIQDRAVPCHIKF 237

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  VV  + G   TA L+++G ++TF  G+  +LGH +  N++ P  +L  L    V 
Sbjct: 238 LRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVS 296

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           QI  G  + LA A  PS   VY+ GC   G+LG G  + +K P
Sbjct: 297 QITCGRHHTLAFA--PSSGGVYAFGCNSHGQLGTGVLSADKSP 337



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 26/203 (12%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPV-VVAAGAWHAAVVGQDGRVCT 234
           +VY+ G    G+LGH        P +  +F   L+ Q + +V+ G  H+  V + G+V  
Sbjct: 53  SVYTCGSNSCGQLGHNK------PGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFA 106

Query: 235 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           WG G  G LG G  E    +P++++ L D +   V  G+     +S+DG ++++G   S 
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG   +  G+ ++    L PQ + SL         I L        H+FAL+ SG ++ 
Sbjct: 167 QLG---LGKGEPSK----LFPQPLKSL-------AGIPLAKITAGGDHSFALSLSGAVFG 212

Query: 354 FGAGDKGQLGIELVNNQTERGNP 376
           +G    GQLG+   N+  +R  P
Sbjct: 213 WGKNKAGQLGL---NDIQDRAVP 232



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 19/179 (10%)

Query: 187 GKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G+LG G  R     PR    F    L+ +V   G  H+  +  DG V T G    G LGH
Sbjct: 10  GQLGIGVERNPMFEPRNCNVFTGRGLKEIV--CGGQHSVFLLHDGSVYTCGSNSCGQLGH 67

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                   P+ V AL+  K   V+ G   +  V+E G V+++G GE   LG        G
Sbjct: 68  NKPGI--TPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLG-------LG 118

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                V  P+L+  L   + R+ Q+     +  N H  AL++ G+L+ +G    GQLG+
Sbjct: 119 TTETAVRIPRLIKRL--CDHRIAQV-----MCGNQHCIALSKDGQLFTWGQNTSGQLGL 170



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 18/131 (13%)

Query: 235 WGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           WG  + G LG G E      P+            +  G   +  +  DG VY+ G     
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LGHN             +TP+ V +L    +++  +S        AH+ A+ E G+++A
Sbjct: 64  QLGHNKPG----------ITPEFVGALD--TQKITLVSCGQ-----AHSLAVNEQGQVFA 106

Query: 354 FGAGDKGQLGI 364
           +GAG++GQLG+
Sbjct: 107 WGAGEEGQLGL 117



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
             P + + L+  +++  + G   T  ++  G ++ FG  S+G+  +G    +L+  P+ V
Sbjct: 230 AVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELL--PRRV 287

Query: 96  ESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
             L    V Q   G   T A     G VY F   +  +LG      D  P+PL
Sbjct: 288 LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSPYPL 340


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 133/301 (44%), Gaps = 34/301 (11%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG------ 120
            V+ +G    G+   G Q  ++   P +V + +N+ V   A+G   T  LS +G      
Sbjct: 91  HVFMWGDGENGK--LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148

Query: 121 -RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-----PVVQIAAGYCYLLALACQPS 174
             VY      D  L   T  ++      L  L+ I      +V IAAGY + LAL    +
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLAL--NDT 206

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           G  ++S G G  GKLG GS  + + PR +   Q  N + V +A GA H A +   G V T
Sbjct: 207 G-KIFSWGSGSWGKLGIGSDANAESPRFVASLQ--NSKVVHIACGAHHTAAITTVGDVWT 263

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG G  G LGH + + E  P++  +L    A  +  GD  T V+   G +YS G      
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG     D         + P LVT     NE+V+ I           + ALT +GK++AF
Sbjct: 324 LGLGDATD--------RIIPTLVTGF--ANEKVIDIDAK-----GCRSIALTNTGKVFAF 368

Query: 355 G 355
           G
Sbjct: 369 G 369



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
           G +Y +GK  FG   +GV+ T+    V  P+ +E+L  + VV  A G   TA L+  G+V
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 123 YTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           YT+      +LG  + +P  +    L+  L +  V QI+ G  +    AC       +  
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNH---AACSTDMHKFFVW 631

Query: 182 GCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           G    G+LG  H S +    P  I   +  N++   +A G WH  +    G V + G G 
Sbjct: 632 GSNTFGQLGIPHIS-SYMPDPYEITSLREANIRS--IACGGWHTLISTNTGSVMSCGKGW 688

Query: 240 YGCLGHGNEE-----CESVP---KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +G LGHG+ E      +++P   K+V+   D   + V+ G  ++  ++  G ++++G G+
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGD 748

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH +          N   P+ V    ++  RVV +S+ +S     H  AL  SG  
Sbjct: 749 EYQLGHES--------SKNEAYPREVEFFAKI--RVVDVSIGDS-----HMLALDYSGLP 793

Query: 352 YAFGAGDKGQLG 363
           Y++G G  GQLG
Sbjct: 794 YSWGNGSAGQLG 805



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 38/279 (13%)

Query: 123 YTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           + F WG+  + +LG+ +E     P+ ++    N+ V   A G  + L L+       V S
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPY-IVPAFRNVLVKVCALGKQHTLFLSADG---VVLS 146

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIE---QFQLLNLQPVV--------VAAGAWHAAVVGQD 229
            G  + G+LG G     +   + E   Q  L  LQ ++        +AAG +H+  +   
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G++ +WG G +G LG G++     P+ V +L + K +H+A G + T  ++  GDV+++G 
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGK 266

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G    LGH ++ +          +P+L  SL++   + ++         + HT  +  SG
Sbjct: 267 GLRGQLGHKSVKE--------EFSPRLNASLRKCGAQKIRCG-------DDHTLVILRSG 311

Query: 350 KLYAFGAGDKGQLGIELVNNQ------TERGNPERVDID 382
           +LY+ GA   GQLG+    ++      T   N + +DID
Sbjct: 312 QLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDID 350



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 19/276 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L  + ++  A G   T  ++D G+VY +GK + G+   G      +  PQLV+ 
Sbjct: 544 PKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD 603

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENI 154
           L +  V Q ++G    A  +   +   F WG++   +LG  H      +P+ +  +L   
Sbjct: 604 LSSHVVCQISLGRNHAACSTDMHKF--FVWGSNTFGQLGIPHISSYMPDPYEIT-SLREA 660

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--------SRTDEKHPRLIEQF 206
            +  IA G  + L      +  +V S G G  G+LGHG        S+T     +++E F
Sbjct: 661 NIRSIACGGWHTL---ISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGF 717

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
              +   V V+AG   +A +   GR+ TWG G    LGH + + E+ P+ V+    ++ +
Sbjct: 718 G--DSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVV 775

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            V+ GD     +   G  YS+G G +  LGH  + +
Sbjct: 776 DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCE 811



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 138/349 (39%), Gaps = 34/349 (9%)

Query: 32   REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
            R     P+    L G  I Q AAG   ++ +S  G+V+++G   FG+  +     KL  +
Sbjct: 1415 RTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPT 1474

Query: 92   PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            P L        V   A G  F+A +S +G V+T+  G    LGH  +     P  +    
Sbjct: 1475 PLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFS 1534

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG--------LGGKLGHGSRTDEKHPRLI 203
            E   VVQIA G+ ++  +  +P    +   G            G +  GS +        
Sbjct: 1535 E---VVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGST----- 1586

Query: 204  EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
               +            A+ A+   + G V  WG    G LG    +    P ++Q+L   
Sbjct: 1587 ---RSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLAT 1643

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
              +H++     +  V++ G +Y  G  E   LG   +A           TP  + SL  V
Sbjct: 1644 SIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAP--------TPVEIRSLNTV 1695

Query: 324  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
              ++++++         H  ALTE  ++YA+G G  G  G+   N+  E
Sbjct: 1696 --KIMKVACG-----TYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLE 1737



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 29/290 (10%)

Query: 90   TSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----- 143
            ++PQ + S   N  +V+ A G   +   S +G VY +  G+  +LG     + V+     
Sbjct: 1201 STPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAF 1260

Query: 144  -PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
             P P+L  L+   ++ IA G  + + L    S   V S G G  G+LG      +  P++
Sbjct: 1261 NPQPVL-NLKRYFILSIACGRWHNMTLT---SERQVLSWGAGEFGQLGLDHNLSKGTPQM 1316

Query: 203  IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
            ++   L    P  +  G WH+A + + G++  WG   YG LGHG+ +  S P+V Q L  
Sbjct: 1317 VK--ALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRL 1374

Query: 263  VKAIHVA-TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
               +  A  G   T VV     V++ G      LG     D       NV       S++
Sbjct: 1375 EGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNV-----PVSIE 1425

Query: 322  QVN-ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            ++N + + Q++  +      H+ AL+  G+++++G    GQLG E + ++
Sbjct: 1426 ELNGKNICQVAAGDQ-----HSLALSVFGEVWSWGGSPFGQLGHETITDK 1470



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 27/303 (8%)

Query: 66   GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            G V+ +G+D+ G+   G++G +   SP L++SL    +V  +  +  +A ++  G +Y  
Sbjct: 1610 GCVFVWGEDTCGQ--LGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVS 1667

Query: 126  SWGNDARLG-HHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                  RLG  H  P    P P+ + +L  + ++++A G  + LAL  +     VY+ G 
Sbjct: 1668 GGSEHGRLGLGHMAP---APTPVEIRSLNTVKIMKVACGTYHCLALTEEKR---VYAWGD 1721

Query: 184  GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            G  G  G  +  D   P+ +      ++  + V AG +H+A + Q G +  WG    G L
Sbjct: 1722 GKWGNAGVSNTNDVLEPQELSSLAACSI--IGVHAGGFHSAALSQYGDLFMWGKNSNGQL 1779

Query: 244  GHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            G G     E  P  +  L+ V  + V+ G   + V+ +      F CG +A+ G   + D
Sbjct: 1780 GLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNAN-GQLGLGD 1837

Query: 303  GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                     +    +T++  +++R +  +   +    AHT A+++ G L  +G G  GQL
Sbjct: 1838 --------FVDRSTLTAVDALDDRQIVSASCGA----AHTAAVSQYGDLITWGNGRNGQL 1885

Query: 363  GIE 365
            G++
Sbjct: 1886 GLK 1888



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 28/324 (8%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGE----AEYGVQGTKLVTSPQLVESLKNIFV 103
            +I++ A G   ++  S  G VYA+G    G+      +         +PQ V +LK  F+
Sbjct: 1214 KIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFI 1273

Query: 104  VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            +  A G +    L+ E +V ++  G   +LG     +   P  +       P   +  G+
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGW 1333

Query: 164  CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
                + A   SG  +   G  + G+LGHG       PR + Q+  L  +      GA H 
Sbjct: 1334 ---HSAAILESG-KILLWGKNVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRTAGLGANHT 1388

Query: 224  AVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
             VV    +V   G    G LG  +     ++VP  ++ LN      VA GD  +  +S  
Sbjct: 1389 LVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVF 1448

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            G+V+S+G      LGH  I D         L P  +    ++   V  I+         +
Sbjct: 1449 GEVWSWGGSPFGQLGHETITDK--------LAPTPLLERHKIPPDVKSIAC-------GY 1493

Query: 342  TF--ALTESGKLYAFGAGDKGQLG 363
            TF  A++  G+++ +G G+ G+LG
Sbjct: 1494 TFSAAMSAKGEVFTWGNGESGELG 1517



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 33/338 (9%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            G+  + G +   +P   +SL    I+  +A +  +  ++D+G +Y  G    G    G+ 
Sbjct: 1621 GQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGR--LGLG 1678

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH--TEPNDV 142
                  +P  + SL  + +++ A G +    L+ E RVY  +WG D + G+   +  NDV
Sbjct: 1679 HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY--AWG-DGKWGNAGVSNTNDV 1735

Query: 143  EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPR 201
                 L +L    ++ + AG  +  AL+       ++  G    G+LG G+ +  E  P 
Sbjct: 1736 LEPQELSSLAACSIIGVHAGGFHSAALSQYGD---LFMWGKNSNGQLGLGTTSAAEDSPT 1792

Query: 202  LIEQFQLLNLQPVV--VAAGAWHAAVVGQ--DGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             I      NL  VV  V+ GA H+AV+ Q     + T G    G LG G+    S    V
Sbjct: 1793 KIS-----NLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAV 1847

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             AL+D + +  + G   T  VS+ GD+ ++G G +  LG  A          ++  P  +
Sbjct: 1848 DALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKA------GLSKDIENPVQL 1901

Query: 318  TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
             ++   N+ +V++     +     T  ++E G+LY  G
Sbjct: 1902 PAI--CNDPMVKVVCGQEV-----TIVVSEKGELYMAG 1932



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           G  V+  G G  GKLG+ S   +  P ++  F+  N+   V A G  H   +  DG V +
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFR--NVLVKVCALGKQHTLFLSADGVVLS 146

Query: 235 WGWGRYGCLGHGN---------------EECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            G   YG LG G+               +  + +  ++Q+LN++  + +A G Y +  ++
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI--VGIAAGYYHSLALN 204

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           + G ++S+G G    LG  +         AN  +P+ V SL+  N +VV I+        
Sbjct: 205 DTGKIFSWGSGSWGKLGIGS--------DANAESPRFVASLQ--NSKVVHIACGAH---- 250

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            HT A+T  G ++ +G G +GQLG + V  +
Sbjct: 251 -HTAAITTVGDVWTWGKGLRGQLGHKSVKEE 280



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 31/259 (11%)

Query: 116  LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
            L  E  +YT+  G + RLGH        P  +     N  +V++A G  + LA +     
Sbjct: 1175 LEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG-- 1232

Query: 176  MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVV 226
              VY+ G G  G+LG     D      ++     N QPV+         +A G WH   +
Sbjct: 1233 -GVYAWGAGDRGQLGSLENFD-----CVKINYAFNPQPVLNLKRYFILSIACGRWHNMTL 1286

Query: 227  GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              + +V +WG G +G LG  +   +  P++V+AL+      +  G + +  + E G +  
Sbjct: 1287 TSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILL 1346

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            +G      LGH         R         V    ++  +V    L  +     HT  + 
Sbjct: 1347 WGKNVYGQLGHGDTKSCSAPR---------VNQYLRLEGKVRTAGLGAN-----HTLVVM 1392

Query: 347  ESGKLYAFGAGDKGQLGIE 365
             + K++A G+   GQLG++
Sbjct: 1393 VANKVFAMGSNIDGQLGLD 1411



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 158/374 (42%), Gaps = 57/374 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+  AAG   ++ ++D G+++++G  S+G+   G+       SP+ V SL+N  VV  A 
Sbjct: 190 IVGIAAGYYHSLALNDTGKIFSWGSGSWGK--LGIGSDANAESPRFVASLQNSKVVHIAC 247

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   TA ++  G V+T+  G   +LGH +   +  P  L  +L      +I  G  + L 
Sbjct: 248 GAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLV 306

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    SG  +YS+G    G+LG G  TD   P L+  F   N + + + A    +  +  
Sbjct: 307 IL--RSGQ-LYSMGANTHGQLGLGDATDRIIPTLVTGFA--NEKVIDIDAKGCRSIALTN 361

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK-AIHVATGDYTTFVVSEDGDVYS- 286
            G+V  +G                +P+ V  L      I VA   +  F +S+ G ++  
Sbjct: 362 TGKVFAFG-------NETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414

Query: 287 --FGCGESASLGHNAIADGQG--------NRHANVLTPQL-----------VTSL----- 320
             F   E +S    +    +G        N  A + +P++            TS      
Sbjct: 415 RPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDIS 474

Query: 321 -----KQVNERVVQISLTNSIYWNAH-TFALTES------GKLYAFGAGDKGQL--GIEL 366
                K  +E+++    TN+ Y +   T  + +S      G +Y +G G  G+L  G+E 
Sbjct: 475 RASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEY 534

Query: 367 VNNQTERGNPERVD 380
             ++    +P+R++
Sbjct: 535 TRSEESVKHPKRIE 548



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 11/173 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG------VQGTKLVTS 91
           P    SL+   I   A G   T++ ++ G V + GK   G+  +G           L   
Sbjct: 651 PYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYF 710

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            ++VE   + F+V+ + G   +A ++ +GR++T+  G++ +LGH +  N+  P  +    
Sbjct: 711 KKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREV-EFF 769

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLI 203
             I VV ++ G  ++LAL    SG+  YS G G  G+LGHG   + E  PR I
Sbjct: 770 AKIRVVDVSIGDSHMLAL--DYSGLP-YSWGNGSAGQLGHGEMCERETLPRPI 819



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 9/239 (3%)

Query: 35   NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
             GTP   ++L G    +   G   +  I ++G++  +GK+ +G+  +G   TK  ++P++
Sbjct: 1311 KGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHG--DTKSCSAPRV 1368

Query: 95   VESLK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLE 152
             + L+    V  A +G   T V+    +V+      D +LG        +  P+ +  L 
Sbjct: 1369 NQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELN 1428

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
               + Q+AAG  + LAL+       V+S G    G+LGH + TD+  P  + +   +   
Sbjct: 1429 GKNICQVAAGDQHSLALSVFGE---VWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPD 1485

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
               +A G   +A +   G V TWG G  G LGH  +     P +++  ++V  + +A G
Sbjct: 1486 VKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEV--VQIACG 1542



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           Q   V  WG G  G LG+ +EE + VP +V A  +V     A G   T  +S DG V S 
Sbjct: 88  QGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFA 344
           G      LG   + D   +R   V  P    SL ++ + ++Q SL N +   A   H+ A
Sbjct: 148 GSNVYGQLG---MGDHMLSRSTPVSEPSKQKSLDKL-QAIIQ-SLNNIVGIAAGYYHSLA 202

Query: 345 LTESGKLYAFGAGDKGQLGI 364
           L ++GK++++G+G  G+LGI
Sbjct: 203 LNDTGKIFSWGSGSWGKLGI 222



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 111/266 (41%), Gaps = 27/266 (10%)

Query: 117 SREGR--VYTFSWGNDARLGH---HTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 170
           SREG   +YT+  G   RLGH   +T   +   HP  + TL  + VV IA G     AL 
Sbjct: 510 SREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALT 569

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVV---AAGAWHAAVV 226
                  VY+ G    GKLG GS      P  I   QL+ +L   VV   + G  HAA  
Sbjct: 570 ---DTGKVYTWGKSAQGKLGLGS----GKPLAIVVPQLVQDLSSHVVCQISLGRNHAACS 622

Query: 227 GQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
               +   WG   +G LG  H +      P  + +L +     +A G + T + +  G V
Sbjct: 623 TDMHKFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIRSIACGGWHTLISTNTGSV 681

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            S G G    LGH       G+  +     + +   K++ E      +         + A
Sbjct: 682 MSCGKGWHGQLGH-------GDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAA 734

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQ 370
           +T  G+L+ +G GD+ QLG E   N+
Sbjct: 735 ITNKGRLFTWGKGDEYQLGHESSKNE 760



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 24/330 (7%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TPL  R      +   A G   +  +S  G+V+ +G    GE   G     L  +P L++
Sbjct: 1474 TPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGE--LGHAPKVLTYAPSLIK 1531

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH--TEPNDVEPHPLLGTLENI 154
                  VVQ A G    A +  + R+ T      + +G +  T    +    + G+  + 
Sbjct: 1532 DFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSH 1589

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
                         A + Q     V+  G    G+LG       + P L++   LL    V
Sbjct: 1590 TTGHHTTRTSAFSA-SNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQS--LLATSIV 1646

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             ++A +  +A V   G +   G   +G LG G+      P  +++LN VK + VA G Y 
Sbjct: 1647 HISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYH 1706

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
               ++E+  VY++G G+  + G +   D        VL PQ ++SL          S+  
Sbjct: 1707 CLALTEEKRVYAWGDGKWGNAGVSNTND--------VLEPQELSSL-------AACSIIG 1751

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                  H+ AL++ G L+ +G    GQLG+
Sbjct: 1752 VHAGGFHSAALSQYGDLFMWGKNSNGQLGL 1781



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 30  LGREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           +G + N  +P +  SLQ  +++  A GA  T  I+  G V+ +GK   G  + G +  K 
Sbjct: 222 IGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRG--QLGHKSVKE 279

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
             SP+L  SL+     +   G+  T V+ R G++Y+       +LG     + + P  + 
Sbjct: 280 EFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVT 339

Query: 149 GTLENIPVVQIAAGYCYLLAL 169
           G   N  V+ I A  C  +AL
Sbjct: 340 G-FANEKVIDIDAKGCRSIAL 359


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 18/299 (6%)

Query: 44  LQGIRIIQAAA---GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           LQG  IIQ A    G G T+ ++D+G+V+++G   +G+  +G   ++    P+ + +L+ 
Sbjct: 368 LQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHG--NSERQRKPKQIIALQA 425

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
             VVQA+ G   +AVL+++G+V+TF  G    LG         P  +L +L+N  + QIA
Sbjct: 426 EHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLIL-SLKNEHISQIA 484

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  + LALA   +G  +Y+ G G  GKLG GS +    P L++ ++ + L+   +A G+
Sbjct: 485 CGKDHTLALA--NNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKK--IACGS 540

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
             + V+  +G + T+G   +  +   +    ++P++V +L     I +A G      +  
Sbjct: 541 KFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDN 600

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            G+++ +G  E   LG      G  N H     PQLV +    N   +    T+   W+
Sbjct: 601 SGNIWGWGTNEEGQLGI-----GTTNPH---YLPQLVCTFSGTNITRLSAGTTHCAAWS 651



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 20/206 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-LLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           +V++ G G  G+LG G+  DE     I + Q    +Q      G  H   V   G V +W
Sbjct: 339 SVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSW 398

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G YG LGHGN E +  PK + AL     +  + G   + V+++DG V++FG G+   L
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGIL 458

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KLYAF 354
           G     DG GN      TPQL+ SLK  NE + QI+         HT AL  +G KLYA+
Sbjct: 459 G-----DG-GNSPQK--TPQLILSLK--NEHISQIACGKD-----HTLALANNGKKLYAW 503

Query: 355 GAGDKGQLGIELVNNQTERGNPERVD 380
           G G+ G+LG+    + + R  P  VD
Sbjct: 504 GDGEFGKLGL---GSTSVRSIPNLVD 526



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 27/325 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++ +   G   T L+   G V+A G+ ++G    G    +    P  +  L+   ++Q A
Sbjct: 320 QVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLA 377

Query: 108 I---GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
               G+  T  ++  G V+++  G+  +LGH       +P  ++  L+   VVQ + G+ 
Sbjct: 378 TSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFK 436

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   L        V++ G G  G LG G  + +K P+LI    L N     +A G  H  
Sbjct: 437 HSAVLT---KDGKVFTFGQGQYGILGDGGNSPQKTPQLI--LSLKNEHISQIACGKDHTL 491

Query: 225 VVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
            +  +G+ +  WG G +G LG G+    S+P +V +  +V    +A G   + V++ +G 
Sbjct: 492 ALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGY 551

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           +Y+FG  +   +    + D           PQ+V+SL  +   ++ I++  +     +  
Sbjct: 552 LYTFGHKDFLGIAETDLLDNT--------IPQIVSSL--MPHPIIDIAVGCN-----YIL 596

Query: 344 ALTESGKLYAFGAGDKGQLGIELVN 368
           AL  SG ++ +G  ++GQLGI   N
Sbjct: 597 ALDNSGNIWGWGTNEEGQLGIGTTN 621



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 11/231 (4%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQ   ++QA+ G   + +++  G+V+ FG+  +G    G  G     +PQL+ SLKN  
Sbjct: 422 ALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYG--ILGDGGNSPQKTPQLILSLKNEH 479

Query: 103 VVQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           + Q A G   T  L+  G ++Y +  G   +LG  +      P+ L+ +  N+ + +IA 
Sbjct: 480 ISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPN-LVDSYRNVCLKKIAC 538

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA 220
           G  + + LA   +   +Y+ G      +      D   P+++     L   P++ +A G 
Sbjct: 539 GSKFSIVLA---TNGYLYTFGHKDFLGIAETDLLDNTIPQIVSS---LMPHPIIDIAVGC 592

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
            +   +   G +  WG    G LG G      +P++V   +      ++ G
Sbjct: 593 NYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAG 643


>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Strongylocentrotus
            purpuratus]
          Length = 1514

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 97/365 (26%)

Query: 91   SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            SP ++ESL    VVQ A       VL+R  +VY   + N+   G H          L+  
Sbjct: 724  SPCMLESLSEFGVVQMACSERCLIVLTRTSKVY-LQYFNNEPPGFH----------LVDG 772

Query: 151  LENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF- 206
            L N  V+QIAA   G  YL   A       VY+ G G GG+LG G+ +  + P L++   
Sbjct: 773  LSNKDVIQIAAHPEGKHYLALTA----DWEVYAWGNGEGGRLGLGNTSAREDPTLVQGLP 828

Query: 207  -QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG------------------- 246
             Q      + ++ G+ ++A +  +G V TWG G YG LGHG                   
Sbjct: 829  SQSTGQHVIQISCGSSYSAALTSNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLT 888

Query: 247  -----NEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASL---- 295
                 N + +  PK+V  L + K IH+A G  D  T  V++ G ++SFG G+   L    
Sbjct: 889  PKLVSNSDDQLTPKLVSGLKEQKFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGG 948

Query: 296  --------------GHNAIADGQGNRHANVLT--------------------------PQ 315
                          G +A+    GN+ + +LT                          P+
Sbjct: 949  SDGCKLPKLVDKLQGQHAVKACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPK 1008

Query: 316  LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            ++ +L+   +++V I  +       HT A+ ESG+ + +G  D+GQLG+     ++ +G 
Sbjct: 1009 MIEALR--GKKIVDIQSS-----GCHTVAIAESGEFFCWGRNDQGQLGLGEAALKSNKGE 1061

Query: 376  PERVD 380
            P  ++
Sbjct: 1062 PTLIE 1066



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 32/257 (12%)

Query: 67   QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAVLSREGRV 122
            +VYA+G    G    G+  T     P LV+ L +      V+Q + G+ ++A L+  G V
Sbjct: 798  EVYAWGNGEGGR--LGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYSAALTSNGEV 855

Query: 123  YTFSWGNDARLGHHTEPNDVEPH-----------------------PLLGTLENIPVVQI 159
            YT+  G   RLGH    + + P                         L+  L+    + I
Sbjct: 856  YTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLKEQKFIHI 915

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G      LA   +G+ ++S G G  GKLG G     K P+L+++ Q      V    G
Sbjct: 916  ALGSNDGQTLAVTDTGL-LFSFGNGDYGKLGRGGSDGCKLPKLVDKLQ--GQHAVKACCG 972

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               + ++ + G V TWG G    LGHG+EE +  PK+++AL   K + + +    T  ++
Sbjct: 973  NQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHTVAIA 1032

Query: 280  EDGDVYSFGCGESASLG 296
            E G+ + +G  +   LG
Sbjct: 1033 ESGEFFCWGRNDQGQLG 1049


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 1655 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 1712

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 1713 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 1771

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 1772 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 1827

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 1828 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 1887

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 1888 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 1938

Query: 339  NA 340
             A
Sbjct: 1939 TA 1940



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 1629 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1688

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 1689 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 1746

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 1747 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 1793

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 1794 GDYGKLGL---GNSTAKSSPQKIDV 1815



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1668

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 1669 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 1727

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 1728 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1782

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 1783 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 1842

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 1843 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVGA-------EHTLALA 1887

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 1888 SNGDVYAWGSNSEGQLGLGHTNHVRE 1913



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 1705 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 1762

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 1763 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 1821

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 1822 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 1878

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 1879 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 1931



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 1797 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-- 1854

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
              +    PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 1855 RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGHT---N 1909

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 1910 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 1942


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+     Q ++ I A+ G    + ++D G  Y++G +  G+  +    TK +  P+L+ES
Sbjct: 407 PVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATK-IHVPKLIES 465

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+  +  A++    +AV++  G +YTF   +  +LG     +   P  L+ +LE   V 
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKSLEATEVS 524

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G  +   + C  +G  +++ G    G+LG       K P L+    L N     VA
Sbjct: 525 MVACGLYH--TIICTAAG-ELFTCGKNDYGQLGLAHNRQIKLPTLV---ALPNEMVSFVA 578

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G +H+ VV   GR  ++G   YG LG G++  ++VP VV   ++ + +    G Y T +
Sbjct: 579 CGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVL 638

Query: 278 VSEDGDVYSFGCGESASLGHNAIADG 303
           +SE G VY FG      LG+   AD 
Sbjct: 639 LSEQGQVYVFGRNNKGQLGNRGSADA 664



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 24/317 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQA 106
           I Q  +G     ++++ G V   G +  G+   G    + V   + V++L++  +  + A
Sbjct: 363 IRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAA 421

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           + G      L+  G  Y++ + +  +LGH      +    L+ +L++  +   +  Y + 
Sbjct: 422 SNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHS 481

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
             +        +Y+ G    G+LG      +  P+L++  +   +   +VA G +H  + 
Sbjct: 482 AVIT---DAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVS--MVACGLYHTIIC 536

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G + T G   YG LG  +     +P +V   N++ +  VA G Y + VVS  G  +S
Sbjct: 537 TAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSF-VACGYYHSVVVSTGGRAFS 595

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   LG  +        H NV  P +V      N R+V+   T   Y   HT  L+
Sbjct: 596 FGRNDYGQLGIGS------KVHQNV--PNVVA--LSSNTRMVRA--TCGCY---HTVLLS 640

Query: 347 ESGKLYAFGAGDKGQLG 363
           E G++Y FG  +KGQLG
Sbjct: 641 EQGQVYVFGRNNKGQLG 657



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 32/306 (10%)

Query: 65  AGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
           +G++Y+ G++S+GE   G  ++  +L +    V       + Q   GN   AVL+ EG V
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTS----VSLCGWDDIRQVVSGNETLAVLTNEGVV 382

Query: 123 YTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
            T       + G  H +   +   P+   L +  V  IAA       +A   +G+A YS 
Sbjct: 383 LTCGLNKSGQCGQGHFDERVMMLRPV-QALRSQRVKFIAASNGCEHMIALTDTGLA-YSW 440

Query: 182 GCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
           G    G+LGH +   + H P+LIE  +   L    V+    H+AV+   G + T+G    
Sbjct: 441 GYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYH--HSAVITDAGELYTFGMNDC 498

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HN 298
           G LG  + + +S P++V++L   +   VA G Y T + +  G++++ G  +   LG  HN
Sbjct: 499 GQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN 558

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                       +  P LV    ++      +S     Y+  H+  ++  G+ ++FG  D
Sbjct: 559 R----------QIKLPTLVALPNEM------VSFVACGYY--HSVVVSTGGRAFSFGRND 600

Query: 359 KGQLGI 364
            GQLGI
Sbjct: 601 YGQLGI 606



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
           C+ SG  +YS G    G+LG G   +      +      +++ VV  +G    AV+  +G
Sbjct: 324 CEASG-ELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVV--SGNETLAVLTNEG 380

Query: 231 RVCTWGWGRYGCLGHGN-EECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSF 287
            V T G  + G  G G+ +E   + + VQAL    VK I  + G      +++ G  YS+
Sbjct: 381 VVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSW 440

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G  +   LGH  +A         +  P+L+ SLK        +S         H+  +T+
Sbjct: 441 GYNDRGQLGHENLA-------TKIHVPKLIESLKDKKLGFASVSY-------HHSAVITD 486

Query: 348 SGKLYAFGAGDKGQLGIELVNNQT 371
           +G+LY FG  D GQLG++   +Q+
Sbjct: 487 AGELYTFGMNDCGQLGLDHTQHQS 510



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 18/201 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +SL+   +   A G   T++ + AG+++  GK+ +G  + G+   + +  P LV 
Sbjct: 511 TPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYG--QLGLAHNRQIKLPTLV- 567

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTL 151
           +L N  V   A G + + V+S  GR ++F   +  +LG     H   PN      ++   
Sbjct: 568 ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPN------VVALS 621

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            N  +V+   G CY   L  +     VY  G    G+LG+    D   P  ++     N 
Sbjct: 622 SNTRMVRATCG-CYHTVLLSEQG--QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNS 678

Query: 212 QPVV-VAAGAWHAAVVGQDGR 231
           +  V VAAG +  +++ +  R
Sbjct: 679 RRCVDVAAGFYTTSLIVERKR 699


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 25/266 (9%)

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQ 158
           I + Q A G   TA +++ G +YT       +LG    +  N  +P  L+  L    V+Q
Sbjct: 22  IVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQ-LVSALSKYKVMQ 80

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--V 216
           ++ G+ +  A+    SG  ++S G    G+LG  S     +P+L+    L  +   V  V
Sbjct: 81  VSCGHSHTCAII--DSG-ELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDV 137

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           + G +H   V ++G+VC++G G+ G LG GN+  +  P ++ +L+ +  I V  G Y T 
Sbjct: 138 SCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQI--IKVKCGFYHTL 195

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            + E G VYS G  +   L       GQG+   N+ +P+LV  L+         S    I
Sbjct: 196 FLDESGRVYSCGLNDEGQL-------GQGHNEGNISSPRLVLELEH--------SFIKKI 240

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQL 362
           +  +H+ A+T++ ++Y FG    GQ 
Sbjct: 241 FAGSHSAAITDANEIYFFGKSQLGQF 266



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 53/280 (18%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-- 95
           P    +L   +++Q + G   T  I D+G+++++G  S  E + G+       +PQLV  
Sbjct: 67  PQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSS--EGQLGINSNGSHYNPQLVNF 124

Query: 96  ESLK--NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
             LK  N FV   + G + T  + + G+V +F  G   +LG   +    +P  LL +L  
Sbjct: 125 SDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPF-LLNSLSQ 183

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQF------ 206
           I  +++  G+ + L L    SG  VYS G    G+LG G +  +   PRL+ +       
Sbjct: 184 I--IKVKCGFYHTLFL--DESG-RVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIK 238

Query: 207 --------------------------QLLNLQPVVVAAGAWHAAVVGQ--------DGRV 232
                                     Q L  Q V +  G  +   +G         DG+V
Sbjct: 239 KIFAGSHSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDGKV 298

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            +WG  + G LG G+ +   +P +V+ LN+ K I    G+
Sbjct: 299 YSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGE 338



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 24/182 (13%)

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKV 256
           +PR+   FQ++  Q   +A G  H A V ++G + T G    G LG G +  ++   P++
Sbjct: 14  YPRVCS-FQIVIHQ---LACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQL 69

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V AL+  K + V+ G   T  + + G+++S+G      LG N+        H N   PQL
Sbjct: 70  VSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINS-----NGSHYN---PQL 121

Query: 317 V--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
           V  + LK +N  V  +S     Y+  HT A+ ++G++ +FG+G KGQLG     NQ ++ 
Sbjct: 122 VNFSDLKGINTFVTDVSCG---YY--HTVAVLKNGQVCSFGSGKKGQLG---TGNQNKQY 173

Query: 375 NP 376
            P
Sbjct: 174 KP 175



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 31/234 (13%)

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 195
            + N V  +P + + + I + Q+A G  +   +A       +Y++G    GKLG G ++ 
Sbjct: 6   NKRNSVFYYPRVCSFQ-IVIHQLACGLDHTAFVA---KNGYLYTMGSNALGKLGIGQQSL 61

Query: 196 -DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +   P+L+    L   + + V+ G  H   +   G + +WG    G LG  +      P
Sbjct: 62  QNSFQPQLVSA--LSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNP 119

Query: 255 KVVQALNDVKAIH-----VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
           ++V   +D+K I+     V+ G Y T  V ++G V SFG G+   LG        GN++ 
Sbjct: 120 QLVN-FSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG-------TGNQNK 171

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               P L+ SL Q+      I +    Y   HT  L ESG++Y+ G  D+GQLG
Sbjct: 172 QY-KPFLLNSLSQI------IKVKCGFY---HTLFLDESGRVYSCGLNDEGQLG 215


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L G R+   + G   T ++ D G +Y  G +S G+        K    P  V +L+ + 
Sbjct: 33  TLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDRNQYK----PVQVSALETVV 88

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLENIPVVQI 159
           +   A G+  T  +S  G+V    WG + R        D+E  P   +L  L +   V++
Sbjct: 89  IKHVACGDDHTLAVSDRGQV--LGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKV 146

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             G  + +AL        ++S G    G+LG G+       R  E   L  +  V VA G
Sbjct: 147 CCGSLHSMALT---RDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 203

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
            +H+  +   G V  WG    G LG GN+E ++ P +++ +      H+A G   T +++
Sbjct: 204 GFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLT 263

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
            DG V+ FG G    LGH +        + N + P+ V  L  +   + Q++        
Sbjct: 264 ADGGVFLFGQGSEGQLGHGS--------NYNEVNPRKVIDL--MGSDITQVTCGKH---- 309

Query: 340 AHTFALTES-GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            HT  L  S G+LYAFG G  GQLG +   + +   NP+RV
Sbjct: 310 -HTLVLEGSKGRLYAFGQGIHGQLGQDEARSCS---NPQRV 346



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 12/274 (4%)

Query: 30  LGREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG++ N   P+   +L+ + I   A G   T+ +SD GQV  +G++  G+        + 
Sbjct: 69  LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
              P++++ L +   V+   G+  +  L+R+GR+  FSWG++   +LG  T   +    P
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRL--FSWGDNTYGQLGIGTLVTNYTDRP 186

Query: 147 L-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +L  +P+V++A G  +  AL    S   V+  G    G+LG G++ ++ +P L+  
Sbjct: 187 TELTSLRGVPLVRVACGGFHSFALTISGS---VFGWGKNDVGQLGLGNKENKAYPTLLRN 243

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
            +   ++   +A G  H A++  DG V  +G G  G LGHG+   E  P+ V  L     
Sbjct: 244 MRSQMVKH--IACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDI 301

Query: 266 IHVATGDYTTFVVS-EDGDVYSFGCGESASLGHN 298
             V  G + T V+    G +Y+FG G    LG +
Sbjct: 302 TQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD 335



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+ + I   A G   T+ +SD  QV  +G++  G+        +    P+++  L +   
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQIA 160
           V+   G+  +  L+R+GR+  FSWG++   +LG  T   +    P  L +L  +P+V++A
Sbjct: 484 VKVCCGSLHSMALTRDGRL--FSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 541

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL    S   V+  G    G+LG G++ ++ +P L+   +   ++   +A G 
Sbjct: 542 CGGFHSFALTISGS---VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKH--IACGQ 596

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS- 279
            H A++  DG V  +G G  G LGHG+   E  P+ V  L       V  G + T V+  
Sbjct: 597 DHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEG 656

Query: 280 EDGDVYSFGCGESASLGHN 298
             G +Y+FG G    LG +
Sbjct: 657 SKGRLYAFGQGIHGQLGQD 675



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 27/286 (9%)

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP---LLGTLENI 154
           L+ + +   A G+  T  +S   RV    WG + R        D+E  P   +L  L + 
Sbjct: 424 LETVVIKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASY 481

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V++  G  + +AL        ++S G    G+LG G+       R  E   L  +  V
Sbjct: 482 QFVKVCCGSLHSMALT---RDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLV 538

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VA G +H+  +   G V  WG    G LG GN+E +S P +++ +      H+A G   
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDH 598

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T +++ DG V+ FG G    LGH +        + N + P+ V  L  +   + Q++   
Sbjct: 599 TAMLTADGGVFLFGQGSEGQLGHGS--------NYNEVNPRKVIDL--MGSDITQVTCGK 648

Query: 335 SIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 HT  L  S G+LYAFG G  GQLG +   + +   NP+RV
Sbjct: 649 H-----HTLVLEGSKGRLYAFGQGIHGQLGQDEARSCS---NPQRV 686



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 11/223 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R L   + ++   G+  +M ++  G+++++G +++G+   G   T     P  + S
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 531

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIP 155
           L+ + +V+ A G F +  L+  G V  F WG ND  +LG   + N   P  LL  + +  
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSV--FGWGKNDVGQLGLGNKENKSYP-TLLRNMRSQM 588

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  IA G  +   L    +   V+  G G  G+LGHGS  +E +PR +    L+      
Sbjct: 589 VKHIACGQDHTAMLT---ADGGVFLFGQGSEGQLGHGSNYNEVNPRKV--IDLMGSDITQ 643

Query: 216 VAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           V  G  H  V+ G  GR+  +G G +G LG       S P+ V
Sbjct: 644 VTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 33/352 (9%)

Query: 21  NERNGKRNLLGREVNG--TPLYCRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFGKDSFG 77
           N  NG+  L G E N   +P    + + +  I++ A G   T+ +++ GQ+YA G + FG
Sbjct: 25  NTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFG 84

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH 135
           +  +    TKL    Q +  ++++ +   A G   +  L+  G++YT  WG+D+  +LG 
Sbjct: 85  QLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSCGQLGL 138

Query: 136 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKLGHGSR 194
            T+        ++ TL ++ +VQI+ GY + +AL        +Y+ G    G        
Sbjct: 139 ETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLGLGLGP 195

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +   P L+    L+ L    +A G +H+ VV + G V  WG   +G LG  ++   S P
Sbjct: 196 GNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSP 253

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             ++ +  VK  ++A G+  +  ++ DG V++ G G    LGH +         +N + P
Sbjct: 254 AQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------SNEIVP 305

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIE 365
           + V  L+ +   V Q++         HT  L  S G++Y+FG G  GQLG +
Sbjct: 306 RKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLGTK 350



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G+ I   A G   + ++S +G V+ +GK+ FG+   G+     ++SP  +++
Sbjct: 201 PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL--GINSQTSLSSPAQLKT 258

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           ++ + V   A G  F+  L+ +G V+T   G   +LGH +  N++ P  +L  L    V 
Sbjct: 259 IRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL-ELMGSTVT 317

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           Q+  G  + L L   PS   VYS G G  G+LG  S  +   P+L+
Sbjct: 318 QVTCGRRHTLTLV--PSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 361



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            +P   ++++ +++   A G   ++ ++  G V+  G   +G+  +G    ++V  P+ V
Sbjct: 251 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIV--PRKV 308

Query: 96  ESLKNIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             L    V Q   G   T  L   +GRVY+F  G+  +LG  +  N   P  +LG
Sbjct: 309 LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLG 363


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 38/328 (11%)

Query: 50   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
            I  A G     L++  G+V+ + +++ G   +G+Q    V  P+LVE L    +   A G
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVD--VCRPKLVEFLALTNIDFVACG 1262

Query: 110  NFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
             + T  +S  G ++T  WG    N   LGH ++ +   P  + G +E + V+ +A G  +
Sbjct: 1263 EYHTCAVSTSGDLFT--WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG-TW 1319

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA- 224
              ALA   +   +++ G G  G LGHG R    +P+ ++   L  L+ + VA G WH   
Sbjct: 1320 HSALA--TANGKLFTFGDGAFGVLGHGDRESVSYPKEVK--MLSGLKTLKVACGVWHTVA 1375

Query: 225  ---VVGQDG------RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
               V+ Q G      ++ TWG G    LGHGN+E   +P  V +L D     +A G   T
Sbjct: 1376 IVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFT 1435

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G V++ G      LG ++ +DG+         P LV   + V E V +IS  + 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLG-SSNSDGK--------LPCLVQD-RLVGEFVEEISCGDH 1485

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 H   LT   +++ +G G  G+LG
Sbjct: 1486 -----HVAVLTSRSEVFTWGKGSNGRLG 1508



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 122/238 (51%), Gaps = 18/238 (7%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            ++G++++  A G   + L +  G+++ FG  +FG   +G + +  V+ P+ V+ L  +  
Sbjct: 1306 VEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRES--VSYPKEVKMLSGLKT 1363

Query: 104  VQAAIGNFFTA----VLSREG------RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            ++ A G + T     V+++ G      +++T+  G+  RLGH  +   + P   + +L +
Sbjct: 1364 LKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLP-TCVSSLID 1422

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
                QIA G+ + +AL    +   V+++G    G+LG  S +D K P L+ Q +L+    
Sbjct: 1423 YNFNQIACGHTFTVALT---TSGHVFTMGGTSHGQLG-SSNSDGKLPCLV-QDRLVGEFV 1477

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              ++ G  H AV+     V TWG G  G LGHG+++    P +V+AL +     ++ G
Sbjct: 1478 EEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCG 1535



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 121/309 (39%), Gaps = 34/309 (11%)

Query: 32   REVNGTPLYCRSLQGIRIIQAAAGAGRTMLI----------SDAGQVYAFGKDSFGEAEY 81
            RE    P   + L G++ ++ A G   T+ I          + + +++ +G        +
Sbjct: 1346 RESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGH 1405

Query: 82   GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
            G + T L+  P  V SL +    Q A G+ FT  L+  G V+T    +  +LG       
Sbjct: 1406 GNKETYLL--PTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGK 1463

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            + P  +   L    V +I+ G  ++  L    S   V++ G G  G+LGHG + D K P 
Sbjct: 1464 L-PCLVQDRLVGEFVEEISCGDHHVAVLT---SRSEVFTWGKGSNGRLGHGDKDDRKTPT 1519

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG----RYGCLGHGNEECESVP--- 254
            L+E  +  +++   ++ GA  +   G     C   +G    R+ C   G   C +     
Sbjct: 1520 LVEALRERHVKS--ISCGADQSVCSG-----CRQAFGFTRKRHNCYNCGLVHCHACSSKK 1572

Query: 255  --KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
              K   A    K   V    YT     E G  Y+       S       DG G    ++ 
Sbjct: 1573 ALKAALAPTPGKPHRVCDACYTKLKAGESG--YNSNVANRNSTTPTRSLDGTGRPDRDIR 1630

Query: 313  TPQLVTSLK 321
            + +++ S K
Sbjct: 1631 SSRILLSPK 1639


>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 740

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 50/344 (14%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAI 108
           +   AG G + L++D  ++Y++GK              + T+ Q V  L+ +  V++ + 
Sbjct: 48  VHVVAGNGASTLLTDGWEIYSWGKT-------------VGTNNQSVRKLQQLSNVLEVSH 94

Query: 109 GNFFTAVLSREGRVYTFSWGNDARL-GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G+  +A +   G VY   WG  + L G   +    +P  L      +   Q+A G  ++ 
Sbjct: 95  GSNHSATVLSSGEVY--GWGEMSFLEGLRRKRTIKQPRKLTFDKVQLNAKQVACGDRHVC 152

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDE-----KHPRLIEQF--QLLNLQPVVVAAGA 220
            L  Q  GM + S+G    G+LG G ++ E      H R++ +    L N+Q   VA G 
Sbjct: 153 IL--QNDGM-LMSLGANDAGQLGIGRQSKETKVPINHIRIVIKRCDSLSNVQFKEVACGN 209

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVV 278
            H  A+  QDG + +WGWG  G LGH +EE    P  V+AL+ V+    VA G   T   
Sbjct: 210 NHCVAISAQDGALFSWGWGTNGRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAG 269

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           +++GDVY FG       GH+ +A G+     + L P L       N+ VV++S       
Sbjct: 270 TQEGDVYGFGWN-----GHSQVAGGE----TDCLKPMLCLE----NQGVVRLSCG----- 311

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
            AH+ A++ SG L+ +G  D GQ G   V N+     P RV+ +
Sbjct: 312 FAHSAAISSSGSLFTWGMNDDGQCG---VGNEETVPRPTRVEFE 352


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 21/319 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +   G ++   A G   + ++  +G+V  +G++ +G+   G Q  +    P  V 
Sbjct: 19  TPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQ--EQTEHPTFVG 76

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL  +  +  + G   T V+S +GRV+++  G + +LGH +  N   P  ++  +    V
Sbjct: 77  SLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTP-SVVQAMRGRDV 135

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + +  G  + + +    +G  +Y+ G    G+ G GS +D   P+ +E  +   +Q    
Sbjct: 136 LAVTCGVGHTVIVL---AGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQH--A 190

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           + GA H AVV   G V T+G G  G LGHG+ +  S+P+ V AL  +    VA G+  T 
Sbjct: 191 SCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTV 250

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
             + D  V+ FG      LG ++ +      H  +  P+ +  LK   E  V++   N  
Sbjct: 251 CAAFDHRVFGFGLNNVGQLGASSTS------HPYLSEPRQMEFLK---EEEVELCKCN-- 299

Query: 337 YWNAHTFALTESGKLYAFG 355
              +   ALT  G L A+G
Sbjct: 300 --QSEVIALTRRGALRAWG 316



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+ G G++   +HP  +    L  +  + V+ G  H  VV +DGRV +WG G  G LGHG
Sbjct: 59  GQCGTGTQEQTEHPTFVGS--LFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG 116

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           + +  + P VVQA+     + V  G   T +V   G++Y+ G  ++   G  + +D    
Sbjct: 117 SRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD---- 172

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               +L+PQ V SL+   E V   S         HT  +T  G+++ FG+G  GQLG
Sbjct: 173 ----LLSPQCVESLR--GEGVQHASCG-----AGHTAVVTGGGEVFTFGSGSCGQLG 218



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
           G +     PR++++   +  Q   VA G  H+A+V   G V  WG  +YG  G G +E  
Sbjct: 12  GEQVSSSTPRMLKK--AMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
             P  V +L  V  + V+ G   T VVSEDG V+S+G G +  LGH       G+R  N+
Sbjct: 70  EHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGH-------GSRD-NL 121

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            TP +V +++  +   V   +        HT  +   G+LY  G    GQ G+
Sbjct: 122 TTPSVVQAMRGRDVLAVTCGV-------GHTVIVLAGGELYTCGWNKNGQCGV 167



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 23/275 (8%)

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LL 148
           ++P++++      V   A G   +A++   G V    WG +      T   +   HP  +
Sbjct: 18  STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEV--LCWGENKYGQCGTGTQEQTEHPTFV 75

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
           G+L  +  + ++ G  + + ++       V+S G G  G+LGHGSR +   P +++  + 
Sbjct: 76  GSLFGVACMSVSCGGAHTVVVS---EDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRG 132

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            ++  + V  G  H  +V   G + T GW + G  G G+      P+ V++L      H 
Sbjct: 133 RDV--LAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHA 190

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           + G   T VV+  G+V++FG G    LGH    D        +  P+ V +L       V
Sbjct: 191 SCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQD--------LSMPRRVGAL-------V 235

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            I ++       +T       +++ FG  + GQLG
Sbjct: 236 GIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+     R+   TP   ++++G  ++    G G T+++   G++Y  G +  G+   GV
Sbjct: 110 NGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQC--GV 167

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             T  + SPQ VESL+   V  A+ G   TAV++  G V+TF  G+  +LG H +  D+ 
Sbjct: 168 GSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLG-HGDCQDLS 226

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
               +G L  I +  +A G  Y +   C      V+  G    G+LG  S +   HP L 
Sbjct: 227 MPRRVGALVGIVMSMVACGEEYTV---CAAFDHRVFGFGLNNVGQLGASSTS---HPYLS 280

Query: 204 EQFQLLNLQ 212
           E  Q+  L+
Sbjct: 281 EPRQMEFLK 289


>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 411

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 36/322 (11%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  AAG    + +   G V+A+G + FG+   G    +   +P  V+++K++  + A  
Sbjct: 88  VVSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENR--NTPVKVKTIKDVTEIDA-- 143

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G + +  L  +G V+   WGN+   +LG  T+ +  +P  + G L N  VV ++ G  + 
Sbjct: 144 GFYHSIALQSDGTVWV--WGNNELDQLGDGTKSDAYKPMQVQG-LNN--VVAVSGGNHHN 198

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           L L    +   ++  G    G+LG G+ T+   P  +  F       V +A+G  +   V
Sbjct: 199 LVLKADGT---IWGWGANGYGQLGDGTMTESSIPTPVYDFN----GAVFIASGNNYNVAV 251

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG +  WG   YG LG+G +    +P  +  LN+  ++ +ATG Y   ++ +DG V S
Sbjct: 252 KADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNN--SVSIATGGYHALILQQDGTVLS 309

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            G   +  LG  A ++ Q        T   V  L  V      +S+    Y   H+ AL 
Sbjct: 310 MGYNRTGQLGTGATSNYQ-------YTTLKVHGLSDV------VSIAAGYY---HSLALK 353

Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
           + G ++A+G  + GQLG   +N
Sbjct: 354 KDGTIWAWGNNEYGQLGDGTLN 375



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 89/209 (42%), Gaps = 28/209 (13%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V QI+ G  + L L  +P G  V++ G    G+LG G+     +PR     Q+  L+ VV
Sbjct: 38  VPQISGGGSHSLVL--KPDG-TVWAWGGNHAGQLGDGTT----NPRKFA-IQVKGLEDVV 89

Query: 216 VAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             A  W H   V  DG V  WG  R+G LG G  E  + P  V+ + DV  I    G Y 
Sbjct: 90  SIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKDVTEIDA--GFYH 147

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  +  DG V+ +G  E   LG    +D           P  V  L      VV +S  N
Sbjct: 148 SIALQSDGTVWVWGNNELDQLGDGTKSD--------AYKPMQVQGL----NNVVAVSGGN 195

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 H   L   G ++ +GA   GQLG
Sbjct: 196 H-----HNLVLKADGTIWGWGANGYGQLG 219



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 16/237 (6%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDA-GQVYAFGKDSFGEAEYG 82
           N + + LG            +QG+  + A +G     L+  A G ++ +G + +G+   G
Sbjct: 162 NNELDQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTIWGWGANGYGQLGDG 221

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
                 + +P + +    +F+   A GN +   +  +G ++ +      +LG+ T+ N  
Sbjct: 222 TMTESSIPTP-VYDFNGAVFI---ASGNNYNVAVKADGSIWGWGMNTYGQLGNGTQTNSK 277

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  + G L N   V IA G  +  AL  Q  G  V S+G    G+LG G+ ++ ++  L
Sbjct: 278 IPIRING-LNN--SVSIATGGYH--ALILQQDG-TVLSMGYNRTGQLGTGATSNYQYTTL 331

Query: 203 IEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
               ++  L  VV +AAG +H+  + +DG +  WG   YG LG G    + +P + Q
Sbjct: 332 ----KVHGLSDVVSIAAGYYHSLALKKDGTIWAWGNNEYGQLGDGTLNYKKLPILSQ 384


>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           +++  P       G+RI+  AAG   T+ +SD GQV+ +G    G+   G +  +LV+SP
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSP 278

Query: 93  QLVESLK------------------------NIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
             +  ++                          +V + A G   +AV++  G + TF WG
Sbjct: 279 HPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWG 338

Query: 129 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 188
              + G  +  +++ P   + +L  I + ++AAG   L    C  S   VY+ G    G+
Sbjct: 339 LYGQCGQGSTDDELSPT-CVSSLLGIRIEEVAAG---LWHTTCASSDGDVYAFGGNQFGQ 394

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           LG G    E  P+L+E   L N+    ++ GA H AV+  +GRV  WGW +YG LG G+ 
Sbjct: 395 LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
              + P  V+ + D    ++A G + T ++ +
Sbjct: 455 IDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQ 485



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 51/291 (17%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGT 150
           P LV     + +V  A G   T  LS  G+V+ + +G + +LG  +    V  PHP    
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHP---- 280

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
              IP ++ ++   Y  A +   SG+ + SV                     ++  ++L 
Sbjct: 281 ---IPCIEPSS---YGKATS---SGVNMSSV---------------------VQCGRVLG 310

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                +A G  H+AV+   G + T+GWG YG  G G+ + E  P  V +L  ++   VA 
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 370

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G + T   S DGDVY+FG  +   L       G G   A  L P+L+ +    N  V  I
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQL-------GTGCDQAETL-PKLLEAPNLENVNVKTI 422

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           S         HT  +T+ G+++ +G    GQLGI    +  +R  P  V I
Sbjct: 423 SCGAR-----HTAVITDEGRVFCWGWNKYGQLGI---GDVIDRNAPAEVRI 465


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 16/198 (8%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            VYS G G    LGHG + DE  P  I++F+   +  V ++AG  HA  V  +G V TWG
Sbjct: 92  TVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFVYTWG 151

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            G  G LGHG+E   + PK++ +L +   + V      TFV+   G +Y FG     SLG
Sbjct: 152 KGYCGALGHGDEIDNTTPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMGFGSLG 211

Query: 297 H--NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
                ++D        VL P+++ +L+     V QIS    +Y   HT  +T  G ++ F
Sbjct: 212 FLDRRVSD-------KVLKPRILDTLRA--HHVSQIS--TGLY---HTMVITSRGHIFGF 257

Query: 355 GAGDKGQLGIELVNNQTE 372
           G  ++ QLG + + +  E
Sbjct: 258 GDNERAQLGHDTLTSCLE 275



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 35  NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQ 93
           N TP    SL+   ++Q      +T ++ ++G +Y FG   FG   +   + +  V  P+
Sbjct: 166 NTTPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPR 225

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           ++++L+   V Q + G + T V++  G ++ F     A+LGH T  + +EP
Sbjct: 226 ILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLGHDTLTSCLEP 276



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 9/174 (5%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E+   P+     +GI I++ +AG    + +   G VY +GK   G   +G +     T+P
Sbjct: 112 ELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDN--TTP 169

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLG 149
           +L+ SLKN  VVQ  +    T VL   G +Y F    +G+   L        ++P  +L 
Sbjct: 170 KLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPR-ILD 228

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           TL    V QI+ G  + + +    S   ++  G     +LGH + T    P  I
Sbjct: 229 TLRAHHVSQISTGLYHTMVIT---SRGHIFGFGDNERAQLGHDTLTSCLEPTQI 279



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 3/182 (1%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           + G VY+FG  +     +G Q  +L   P      K I +V+ + G+     +   G VY
Sbjct: 89  ENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFVY 148

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           T+  G    LGH  E ++  P  LL +L+N  VVQ+         L    S     S+G 
Sbjct: 149 TWGKGYCGALGHGDEIDNTTP-KLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMGF 207

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G  G L          PR+++  +  ++    ++ G +H  V+   G +  +G      L
Sbjct: 208 GSLGFLDRRVSDKVLKPRILDTLRAHHVSQ--ISTGLYHTMVITSRGHIFGFGDNERAQL 265

Query: 244 GH 245
           GH
Sbjct: 266 GH 267


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 36/321 (11%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ ++ +G+VYA G + + +  + +   + +  P+LV+ +    + Q A G+
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGS 95

Query: 111 FFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  L+  G+V   SWG++   +LGH ++ + V+    +  L +  VVQIA G  + LA
Sbjct: 96  RHSMALTEWGQV--LSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLA 153

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAV 225
           L C      +Y+ G  + G+LG  + ++      P L+    LL +    +A G  H+ +
Sbjct: 154 LTCCGE---LYAWGSNIYGQLGVKTPSELGQCNAPMLLTT--LLGIPVRAIACGGNHSFL 208

Query: 226 VGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           + +   V  +GWGR  C  LG  +E   + P  ++ L  +    VA GD  +  ++ +G 
Sbjct: 209 ISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGG 266

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V++ G G    LGH            N + P++V  L  +   + Q++  N      HT 
Sbjct: 267 VFTCGAGAYGQLGHGFC--------GNEMLPRMVMEL--MGSTISQVACGNR-----HTL 311

Query: 344 ALTES-GKLYAFGAGDKGQLG 363
           A+  + G++Y FG G  GQLG
Sbjct: 312 AMVPARGRIYGFGLGSSGQLG 332



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 12/230 (5%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-- 89
           ++V   P   R+L    ++Q A G   ++ ++  G++YA+G + +G+   GV+    +  
Sbjct: 124 QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQL--GVKTPSELGQ 181

Query: 90  -TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
             +P L+ +L  I V   A G   + ++S+   V+ +   N  +LG + E N   P   L
Sbjct: 182 CNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ-L 240

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
            TL  + V  +A G  + + L  +     V++ G G  G+LGHG   +E  PR++   +L
Sbjct: 241 KTLRTLGVRFVACGDEFSVFLTNEG---GVFTCGAGAYGQLGHGFCGNEMLPRMV--MEL 295

Query: 209 LNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +      VA G  H  A+V   GR+  +G G  G LG  N +  ++P++V
Sbjct: 296 MGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQDGR 231
           M +Y  G    G+LG G   DE+    I     +  QP      +A G  H   +   G+
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQ----ILTPSKMPWQPDSAVNQIACGHRHTLFLTASGK 56

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V   G   Y  LGH  E     P  +  L D     +A G   +  ++E G V S+G  E
Sbjct: 57  VYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNE 114

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH +  D        V  P+ V +L  V++ VVQI+  N+     H+ ALT  G+L
Sbjct: 115 CGQLGHASDQDV-------VQLPKTVRAL--VSKTVVQIACGNN-----HSLALTCCGEL 160

Query: 352 YAFGAGDKGQLGIE 365
           YA+G+   GQLG++
Sbjct: 161 YAWGSNIYGQLGVK 174



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 4/122 (3%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L  E N   P   ++L+ + +   A G   ++ +++ G V+  G  ++G+  +G  G ++
Sbjct: 228 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEM 287

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +  P++V  L    + Q A GN  T A++   GR+Y F  G+  +LG     +   P  +
Sbjct: 288 L--PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345

Query: 148 LG 149
           +G
Sbjct: 346 IG 347


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 155/324 (47%), Gaps = 34/324 (10%)

Query: 53  AAGAGRTMLISDAG-----QVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQ 105
           A  AGR+ ++         ++++ G++++GE   G     +KL   P    S K I  V 
Sbjct: 446 AGEAGRSEMLPTVASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFF--SAKGIRDV- 502

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GY 163
            A GN   AV+  +G V+T       + G+ T    V     +  L  I +  +AA  G 
Sbjct: 503 -AGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH 222
            ++LA+A   S  AV+S G    G+LG GS   + H PR+I+  +         A    H
Sbjct: 562 EHMLAVA---SDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHH 617

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           +AVV  +G + T+G    G LG  + + +  P+VV AL+       A G Y T   + DG
Sbjct: 618 SAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDG 677

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHA-NVLTPQLV-TSLKQVNERVVQISLTNSIYWNA 340
           +VYSFG  +   LG           HA N+ TP LV TSL + +E++V +S     Y+  
Sbjct: 678 EVYSFGKNDYGQLGLG---------HARNIKTPALVKTSLGESDEKIVAVSCG---YY-- 723

Query: 341 HTFALTESGKLYAFGAGDKGQLGI 364
           HT  ++E GKL  +G  D GQLGI
Sbjct: 724 HTVTISEKGKLITWGRNDYGQLGI 747



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 13/302 (4%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R +  TP+   S   I ++ AA G    + ++  G V+++G +  G+   G   +K  T 
Sbjct: 537 RVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHT- 595

Query: 92  PQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           P++++SL+  + +  AA+    +AV+S  G + TF   +  +LG     +   P  ++  
Sbjct: 596 PRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQ-VVDA 654

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLL 209
           L +  V + A G  + +A     S   VYS G    G+LG G   + K P L++      
Sbjct: 655 LSSQVVTKAACGLYHTVAAT---SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGES 711

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           + + V V+ G +H   + + G++ TWG   YG LG G++E ++  + V      K  + +
Sbjct: 712 DEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNAS 771

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G Y + ++  +G V  FG      LG  A      +       P  V S    N+ VV+
Sbjct: 772 CGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSAD------LPLPVPSNSLANDEVVR 825

Query: 330 IS 331
           I+
Sbjct: 826 IA 827



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGD 272
           VA G    AVV  DG V T G  + G  G+G  EE   +   V+AL+   +  +  A G 
Sbjct: 502 VAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGC 561

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
                V+ DG V+S+G  +   LG        G+  +   TP+++ SL++      +  +
Sbjct: 562 EHMLAVASDGAVFSWGYNDRGQLG-------LGSTISKSHTPRMIDSLRE------KYHI 608

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           T +     H+  ++ +G+L  FG  D GQLG++   +Q     P+ VD
Sbjct: 609 TTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQ---HTPQVVD 653


>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
          Length = 497

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 36/302 (11%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 108 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWG 166

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G    K +  P+L+ESLK    V AA G   T  L+  G VY F      +
Sbjct: 167 RNDKGQLGHG--DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQ 224

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 225 LGLGNK-TDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 280

Query: 193 SRTDEKH--------------PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQ 228
           S  D K+               R I  F       Q+L +  VVV   A G  H+ ++  
Sbjct: 281 S--DGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 286
             RV +WG+G YG LGH  +  E VP++V+  +     A  +  G   +F VSE G ++ 
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398

Query: 287 FG 288
           +G
Sbjct: 399 WG 400



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  +A+G C   +L     G  ++S G    G+LGHG       P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E  +      V  A G  H   + ++G V  +G  + G LG GN+  ++VP   Q L + 
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 264 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
           + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L  + + 
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304

Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
              +  +    + + N +  +      H+  L    +++++G G  G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++   +  +LGH  +   ++   L+ +L+    V  A G  + LAL    S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              VY+ G    G+LG G++TD    P  I    L N QP+  VA GA  + ++   G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE + + +              + +V    +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   + ++     V+S+G G    LGH+   D         + P+LV           
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 292
           WG  RYGCL                   V+   VA+G     + +++ +G ++S+G  + 
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH  I          +  P+L+ SLK   E  V  +   +     HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215

Query: 353 AFGAGDKGQLGI 364
           AFG    GQLG+
Sbjct: 216 AFGENKMGQLGL 227



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R+    P   + L G ++   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 406 RDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTT 465

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I+  QA +GN  T V++R+
Sbjct: 466 AQEVKTLDGIYSDQAIMGNSHTLVVARD 493


>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           +++  P       G+RI+  AAG   T+ +SD GQV+ +G    G+   G +  +LV+SP
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSP 278

Query: 93  QLVESLK------------------------NIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
             +  ++                          +V + A G   +AV++  G + TF WG
Sbjct: 279 HPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWG 338

Query: 129 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 188
              + G  +  +++ P   + +L  I + ++AAG   L    C  S   VY+ G    G+
Sbjct: 339 LYGQCGQGSTDDELSPT-CVSSLLGIRIEEVAAG---LWHTTCASSDGDVYAFGGNQFGQ 394

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           LG G    E  P+L+E   L N+    ++ GA H AV+  +GRV  WGW +YG LG G+ 
Sbjct: 395 LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
              + P  V+ + D    ++A G + T ++ +
Sbjct: 455 IDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQ 485



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 121/291 (41%), Gaps = 51/291 (17%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGT 150
           P LV     + +V  A G   T  LS  G+V+ + +G + +LG  +    V  PHP    
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHP---- 280

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
              IP ++              PS               G  + +      +++  ++L 
Sbjct: 281 ---IPCIE--------------PS-------------SYGKATSSGVNMSSVVQCGRVLG 310

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                +A G  H+AV+   G + T+GWG YG  G G+ + E  P  V +L  ++   VA 
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 370

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G + T   S DGDVY+FG  +   L       G G   A  L P+L+ +    N  V  I
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQL-------GTGCDQAETL-PKLLEAPNLENVNVKTI 422

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           S         HT  +T+ G+++ +G    GQLGI    +  +R  P  V I
Sbjct: 423 SCGAR-----HTAVITDEGRVFCWGWNKYGQLGI---GDVIDRNAPAEVRI 465


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 63/362 (17%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   ++   AG+  ++ I + G+++ +G +  G   +  + TK  ++P  V++L N+ 
Sbjct: 34  ALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPE-TKTESTPSQVKALANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGN-------------------DARLGHH--TEPND 141
           +VQAAIG +    +  EGR  T++WG                    ++++ H   T P  
Sbjct: 93  IVQAAIGGWHCLAVDEEGR--TYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQR 150

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P   +       VV    G+ +       P  +   SV                  P 
Sbjct: 151 CAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISV------------------PV 192

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  + + +    +A GA+H   + Q G V  WG   YG LG G+ +  S P  V+ L 
Sbjct: 193 RVQGLENVTM----IAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLT 248

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            +  + +A G + +  ++ DG VY +G GE   LG        G+  ++ + PQ V  L 
Sbjct: 249 GLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGF-------GDDKSSKMLPQKVHLL- 300

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              E VVQ+S   +     H+ A T SG++++FG GD G+LG          G+P  V +
Sbjct: 301 -AGEPVVQVSCGGT-----HSVAATISGRMFSFGRGDHGRLGY---GGAVTTGHPVEVPV 351

Query: 382 DL 383
            L
Sbjct: 352 SL 353



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 32/288 (11%)

Query: 26  KRNLLGR----EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           +R  LG     +   TP   ++L  ++I+QAA G    + + + G+ YA+G + +G+   
Sbjct: 66  QRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAE 125

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQ-------AAIGNFFTAVLSREGRVYTFSWGNDARLG 134
             Q  +     +     ++I + Q        A G   + VL+ EG V+T+        G
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTW--------G 177

Query: 135 HHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
               P D++    P  + G LEN  V  IA G  + LAL        V++ G    G+LG
Sbjct: 178 QPWPPGDIKQISVPVRVQG-LEN--VTMIAVGAFHNLALVQHGE---VWAWGNNEYGQLG 231

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
            G       P  ++    L L  V +AAG WH+  +  DG V  WG G +G LG G+++ 
Sbjct: 232 TGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKS 289

Query: 251 ESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             + P+ V  L     + V+ G   +   +  G ++SFG G+   LG+
Sbjct: 290 SKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGY 337



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 7/163 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L+ + +I  A GA   + +   G+V+A+G + +G+   G   T+  +SP  V+ 
Sbjct: 191 PVRVQGLENVTMI--AVGAFHNLALVQHGEVWAWGNNEYGQ--LGTGDTQPRSSPVPVKG 246

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  + +V  A G + +  L+ +G VY +  G   RLG   + +       +  L   PVV
Sbjct: 247 LTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVV 306

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           Q++ G  +  ++A   SG  ++S G G  G+LG+G      HP
Sbjct: 307 QVSCGGTH--SVAATISGR-MFSFGRGDHGRLGYGGAVTTGHP 346



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG GN + +    VV AL D   + V  G   +  + EDG ++++G  +
Sbjct: 7   VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        TP  V +L   N ++VQ ++     W  H  A+ E G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSQVKAL--ANVKIVQAAIGG---W--HCLAVDEEGRT 112

Query: 352 YAFGAGDKGQLGIE-LVNNQTERGNPERVDIDLS 384
           YA+G  + GQ   E     Q  +G  + +  D++
Sbjct: 113 YAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDIT 146


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)

Query: 59  TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           T+   D G+  V++ G++S+GE  +G   ++   S + +++L+   ++Q   GN  T VL
Sbjct: 553 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 610

Query: 117 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           + +G+V+T  + ++ + G             +  L  IP +   +   +     C+ + +
Sbjct: 611 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 662

Query: 177 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 230
                 V + G    G+LGHG+ T E  P++I   +  N    +V+   +H  +  +DG 
Sbjct: 663 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 720

Query: 231 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
              + T+G   YG LGH +     +P+ V+AL+D + + VA G Y T VV+  G  ++FG
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFG 780

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
             +   LG + +         N L P     ++   ER   + +    Y   HT AL   
Sbjct: 781 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 826

Query: 349 GKLYAFGAGDKGQLGI 364
             L+AFG  D GQLG+
Sbjct: 827 AHLFAFGRNDYGQLGL 842



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 124/270 (45%), Gaps = 25/270 (9%)

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           A + N  T     EG    +S G ++   LGH  +    +    +  L+   ++QI AG 
Sbjct: 546 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGH-GDTASRKSFERIQALQQKEIIQIGAGN 604

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + + L    +   V++ G    G+ G G      H   I +    + Q      G  H 
Sbjct: 605 EHTVVLT---ADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQ-AHAYNGCEHT 660

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG- 282
            +V  DGRV T G+   G LGHGN   ESVPK++++L +     V+   Y T +  EDG 
Sbjct: 661 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGN 720

Query: 283 --DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
             ++Y+FG  +   LGHN   D +         PQ V +L   ++++V ++         
Sbjct: 721 LQNLYTFGRNDYGQLGHNDSIDRK--------IPQFVEALS--DQQIVSVACG-----QY 765

Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           HT  +T SGK +AFG  D GQLGI+ + NQ
Sbjct: 766 HTMVVTASGKAFAFGKNDYGQLGIDTMENQ 795



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 163/347 (46%), Gaps = 25/347 (7%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN- 100
           ++LQ   IIQ  AG   T++++  G+V+  G +  G+   G  GT  V+    +  + + 
Sbjct: 590 QALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQG--GTARVSHLSEIPKMDSG 647

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
                A  G   T ++S +GRV T  +    +LGH    ++  P  ++ +LEN  V  ++
Sbjct: 648 SSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPK-IIRSLENKIVRLVS 706

Query: 161 AGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             Y Y   LAC+   +  +Y+ G    G+LGH    D K P+ +E   L + Q V VA G
Sbjct: 707 CSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEA--LSDQQIVSVACG 763

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 278
            +H  VV   G+   +G   YG LG    E +  P  V+  L   + + +  G Y T  +
Sbjct: 764 QYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL 823

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNE----RVVQISLT 333
                +++FG  +   LG   +     +  +N+ L  Q  ++ + ++E     +V+I+  
Sbjct: 824 CSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIAC- 879

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
              Y   HT A++++G +Y FG  + GQLG     + TER  P  +D
Sbjct: 880 -GCY---HTIAVSDNGVMYVFGRNNHGQLG---TGDTTERVYPFPID 919



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 22/257 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQV---YAFGKDSFGEAEYGVQGTKLVTSPQL 94
           P   RSL+   +   +     T+L  + G +   Y FG++ +G+  +     + +  PQ 
Sbjct: 691 PKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQF 748

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           VE+L +  +V  A G + T V++  G+ + F   +  +LG  T  N + P  + G LE  
Sbjct: 749 VEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQ 808

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDE--------KHPRL 202
             ++I  GY + +AL    SG  +++ G    G+LG G    S T           + RL
Sbjct: 809 ECLEIRCGYYHTIALC---SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARL 865

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           I++ +  ++  V +A G +H   V  +G +  +G   +G LG G+      P  +     
Sbjct: 866 IDELEGKDI--VRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVG 923

Query: 263 VKAIHVATGDYTTFVVS 279
            +   VA G Y T V++
Sbjct: 924 KRVALVAAGFYHTVVLT 940


>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
 gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
 gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
          Length = 513

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 36/302 (11%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 108 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWG 166

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G    K +  P+L+ESLK    V AA G   T  L+  G VY F      +
Sbjct: 167 RNDKGQLGHG--DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQ 224

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 225 LGLGNK-TDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 280

Query: 193 SRTDEKH--------------PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQ 228
           S  D K+               R I  F       Q+L +  VVV   A G  H+ ++  
Sbjct: 281 S--DGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 286
             RV +WG+G YG LGH  +  E VP++V+  +     A  +  G   +F VSE G ++ 
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398

Query: 287 FG 288
           +G
Sbjct: 399 WG 400



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  +A+G C   +L     G  ++S G    G+LGHG       P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E  +      V  A G  H   + ++G V  +G  + G LG GN+  ++VP   Q L + 
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244

Query: 264 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
           + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L  + + 
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304

Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
              +  +    + + N +  +      H+  L    +++++G G  G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++   +  +LGH  +   ++   L+ +L+    V  A G  + LAL    S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              VY+ G    G+LG G++TD    P  I    L N QP+  VA GA  + ++   G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
            ++G   YG LGH ++            +CE + + +              + +V    +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   + ++     V+S+G G    LGH+   D         + P+LV           
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 292
           WG  RYGCL                   V+   VA+G     + +++ +G ++S+G  + 
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH  I          +  P+L+ SLK   E  V  +   +     HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215

Query: 353 AFGAGDKGQLGI 364
           AFG    GQLG+
Sbjct: 216 AFGENKMGQLGL 227



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R+    P   + L G ++   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 406 RDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTT 465

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I+  Q  +GN  T V++R+
Sbjct: 466 AQEVKTLDGIYSDQVIMGNSHTLVVARD 493


>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
 gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
          Length = 429

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 166/370 (44%), Gaps = 66/370 (17%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--------AFGKDS--FG 77
           LG E+     P   + L  +  IQ A G   T+ ++ AG++Y        A G+D+    
Sbjct: 52  LGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWGCNDECALGRDTSDTS 111

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS--WGNDARLGH 135
           EAEY          P LV+ L N+ ++Q + G+  TA L+ +GRV+ +   W N   +G 
Sbjct: 112 EAEY---------LPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGL 162

Query: 136 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
           +       P  +LG   N PV++I +G  ++ AL    +G+ +++ GCG  G+LG   R 
Sbjct: 163 NLAGKQPRPIVMLGD-PNDPVIKIGSGNNHVAALTA--NGL-IFTWGCGEQGQLG---RV 215

Query: 196 DEKH-PRLIEQFQLLNLQPVV---------------VAAGAWHAAVVGQDGRVCTWGWGR 239
            E+   R   Q     LQP V               +  G ++   V   G V   G   
Sbjct: 216 AERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNN 275

Query: 240 YGCLGHGNEECESVPKVVQAL------NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           YG +G+GN         + +L      ND + I +A+G++ T +++ +G VYS G G+  
Sbjct: 276 YGQIGNGNITSLYYLAKIDSLSALNDGNDERQILIASGEHHTLILARNGRVYSIGRGDYG 335

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG     D +   H     P  + +L   + + V   L       A +FA++ SG +Y+
Sbjct: 336 RLGLG--PDVKECSH-----PTEIETLANSDIKAVTCGL-------AVSFAVSNSGDVYS 381

Query: 354 FGAGDKGQLG 363
           +G G   QLG
Sbjct: 382 WGMGTNLQLG 391



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 148/325 (45%), Gaps = 46/325 (14%)

Query: 30  LGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK--DSFGEAEY 81
           LGR+ + T      P     L  ++IIQ +AG   T  ++D G+V+ +G   D+ G    
Sbjct: 103 LGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGL 162

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--- 138
            + G +    P ++    N  V++   GN   A L+  G ++T+  G   +LG   E   
Sbjct: 163 NLAGKQ--PRPIVMLGDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFC 220

Query: 139 PNDVEP------HPLLGTL-----ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
             D          P +  +     ++I    I  G   L A+    +   V++ G    G
Sbjct: 221 SRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGPYNLFAVN---AAGEVFACGLNNYG 277

Query: 188 KLGHGSRTDEKHPRLIEQFQLLN----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           ++G+G+ T   +   I+    LN     + +++A+G  H  ++ ++GRV + G G YG L
Sbjct: 278 QIGNGNITSLYYLAKIDSLSALNDGNDERQILIASGEHHTLILARNGRVYSIGRGDYGRL 337

Query: 244 GHGNE--ECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           G G +  EC S P  ++ L  +D+KA  V  G   +F VS  GDVYS+G G +  LG + 
Sbjct: 338 GLGPDVKEC-SHPTEIETLANSDIKA--VTCGLAVSFAVSNSGDVYSWGMGTNLQLGSST 394

Query: 300 IADGQGNRHANVLTPQLVTSLKQVN 324
             D        +LTP LV + +  N
Sbjct: 395 DDD--------ILTPTLVKTKESYN 411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 145/336 (43%), Gaps = 39/336 (11%)

Query: 51  QAAAGAGRTMLISD-AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           Q+     R  L SD AG V   G+   G+   G +  +  + P  V+ L  +  +Q A G
Sbjct: 21  QSKRQKARLSLASDEAGIVLVLGQGELGQLGLGEEILER-SRPTAVKKLLEVEFIQVACG 79

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHP-LLGTLENIPVVQIAAGYCYLL 167
              T  L++ G +YT+   ++  LG  T + ++ E  P L+  L+N+ ++Q++AG  +  
Sbjct: 80  GVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDNHTA 139

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           ALA       V+  G     +   G     K PR I      N   + + +G  H A + 
Sbjct: 140 ALA---DDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAALT 196

Query: 228 QDGRVCTWGWGRYGCLGHGNEE-CE-------------SVPKVVQ-ALNDVKAIHVATGD 272
            +G + TWG G  G LG   E  C              +V +V Q +  D++   +  G 
Sbjct: 197 ANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKDIRFSDIFVGP 256

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN----ERVV 328
           Y  F V+  G+V++ G      +G+  I         ++     + SL  +N    ER +
Sbjct: 257 YNLFAVNAAGEVFACGLNNYGQIGNGNIT--------SLYYLAKIDSLSALNDGNDERQI 308

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            I+         HT  L  +G++Y+ G GD G+LG+
Sbjct: 309 LIASGEH-----HTLILARNGRVYSIGRGDYGRLGL 339



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 15/144 (10%)

Query: 230 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           G V   G G  G LG G E  E S P  V+ L +V+ I VA G   T  +++ G++Y++G
Sbjct: 37  GIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWG 96

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
           C +  +LG     D      A  L P LV  L  V  +++Q+S  ++     HT AL + 
Sbjct: 97  CNDECALGR----DTSDTSEAEYL-PGLVDGLDNV--KIIQVSAGDN-----HTAALADD 144

Query: 349 GKLYAFGA--GDKGQLGIELVNNQ 370
           G+++ +G    ++G +G+ L   Q
Sbjct: 145 GRVFCWGNFWDNRGSIGLNLAGKQ 168


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 33/352 (9%)

Query: 21  NERNGKRNLLGREVNG--TPLYCRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFGKDSFG 77
           N  NG+  L G E N   +P    + + +  I++ A G   T+ +++ GQ+YA G + FG
Sbjct: 6   NTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSNDFG 65

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH 135
           +  +    TKL    Q +  ++++ +   A G   +  L+  G++YT  WG+D+  +LG 
Sbjct: 66  QLGHDGCRTKL----QKIPGVESLVMTSVACGEAHSMALNEWGQLYT--WGSDSCGQLGL 119

Query: 136 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-LGGKLGHGSR 194
            T+        ++ TL ++ +VQI+ GY + +AL        +Y+ G    G        
Sbjct: 120 ETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGE---LYTWGSNEFGQLGLGLGP 176

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +   P L+    L+ L    +A G +H+ VV + G V  WG   +G LG  ++   S P
Sbjct: 177 GNVSKPTLVNS--LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSP 234

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             ++ +  VK  ++A G+  +  ++ DG V++ G G    LGH +         +N + P
Sbjct: 235 AQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF--------SNEIVP 286

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIE 365
           + V  L+ +   V Q++         HT  L  S G++Y+FG G  GQLG +
Sbjct: 287 RKV--LELMGSTVTQVTCGRR-----HTLTLVPSKGRVYSFGLGSVGQLGTK 331



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G+ I   A G   + ++S +G V+ +GK+ FG+   G+     ++SP  +++
Sbjct: 182 PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL--GINSQTSLSSPAQLKT 239

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           ++ + V   A G  F+  L+ +G V+T   G   +LGH +  N++ P  +L  L    V 
Sbjct: 240 IRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL-ELMGSTVT 298

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           Q+  G  + L L   PS   VYS G G  G+LG  S  +   P+L+
Sbjct: 299 QVTCGRRHTLTLV--PSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 342



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            +P   ++++ +++   A G   ++ ++  G V+  G   +G+  +G    ++V  P+ V
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIV--PRKV 289

Query: 96  ESLKNIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             L    V Q   G   T  L   +GRVY+F  G+  +LG  +  N   P  +LG
Sbjct: 290 LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLG 344


>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
 gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
          Length = 495

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +  + +   A  +++I+  G+++++G
Sbjct: 90  IGRKEVPKQQAAFRNL-GQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWG 148

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK + +P+L+E L    +V AA G   T  L+  G VYTF      +
Sbjct: 149 RNDKGQLGHG--DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQ 206

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D    P        P+V++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 207 LGQGNQ-TDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGN---LYSFGCPEYGQLGHN 262

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VV   VA GA H  V+    
Sbjct: 263 SDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQK 322

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F +SE G ++ +G
Sbjct: 323 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 112 PH-RYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169

Query: 204 EQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           E       + V+VAA  G  H   + ++G V T+G  + G LG GN+    +       N
Sbjct: 170 EGLG----EEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
               + VA G   + +V   G++YSFGC E   LGHN+    IA  Q       L P+ V
Sbjct: 226 GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV 285

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 286 AIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 131/328 (39%), Gaps = 65/328 (19%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           GR  +          G++ +G   YG    VQ + +V+ P    SL              
Sbjct: 91  GRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSL-------------- 136

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             +++ EG+++++   +  +LGH        P  + G  E + +V  A G  + LAL   
Sbjct: 137 --IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALT-- 191

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
                VY+ G    G+LG G++TD        Q+   N QP+V VA GA  + +V   G 
Sbjct: 192 -ENGTVYTFGENKLGQLGQGNQTDAVLSPATIQY---NGQPIVKVACGAEFSMIVDCKGN 247

Query: 232 VCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIH 267
           + ++G   YG LGH ++            +CE +P+ V              + +V A  
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARD 307

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           VA G   T V+     V+S+G G    LGH    D         + P+LV          
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGA 359

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFG 355
            QI           +FAL+E G L+ +G
Sbjct: 360 TQIYCGYQC-----SFALSEMGGLFFWG 382


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 140/276 (50%), Gaps = 12/276 (4%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
           +N+++    L G ++   P +  +L  + ++Q A G+     ++  G+VYA G+ + G  
Sbjct: 433 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 491

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
             G+  +  V  P+ + +L +  V + A+  G      L+ +G+V+++  G+D +LGH +
Sbjct: 492 GLGIS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 550

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             N  +P  L+  L+   +  IA G  +  AL    S   +Y+ G G  G+LGHG  T +
Sbjct: 551 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 606

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
             P++++   LL  + + VA G+  A  +    +G V +WG G +G LG G  E  ++P+
Sbjct: 607 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 664

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
            ++ LN      +  G   +  +++ G V+++G G 
Sbjct: 665 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGR 700



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 121 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           R   F WG ND       + + ++      TL  + VVQ+A G   L A+  +     VY
Sbjct: 425 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 481

Query: 180 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + G    G+LG G S      PR I       ++ V V +G  HA  +  DG+V +WG G
Sbjct: 482 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 541

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LGH +      P++++AL   +   +A G   +  ++  G++Y++G GE   LGH 
Sbjct: 542 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 601

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                    +   L P++V  L  +  RV+Q++  +    +A T ALT+ G ++++G GD
Sbjct: 602 D--------NTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 648

Query: 359 KGQLG 363
            G+LG
Sbjct: 649 FGKLG 653


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 151/341 (44%), Gaps = 42/341 (12%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G     LI+  G+V+ +G+ S G+  + V     V+SP +VESL    V   A G + T 
Sbjct: 313 GRNHAALITKRGEVFCWGEGSRGKLGHKVDMD--VSSPTIVESLDGFLVKFVACGEYQTC 370

Query: 115 VLSREGRVYTFSWGNDARLGH----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
            L+  G +  F WG +   G+        +   P  + G L  + +  +A G  +  A++
Sbjct: 371 ALTDSGEL--FVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVS 428

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV---- 226
              S   +++ G G  G LGHG+     HP+ +E  + L ++ V  A G+WH A +    
Sbjct: 429 ---SSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSV--ACGSWHTAAIVDVI 483

Query: 227 -------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
                  G  G++ TWG G  G LGH + E +  P  V  L +   + V+ G   T  ++
Sbjct: 484 FDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALT 543

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
             G +Y+ G      LG         N  A   +  +V    ++ E  V+  +++  Y  
Sbjct: 544 RTGKIYTMGSSVHGQLG---------NPQAKNKSIAIVEG--KLKEEFVK-EISSGSY-- 589

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            H  ALT  G +Y +G G  GQLG+    N  +R  P  V+
Sbjct: 590 -HVAALTSGGSVYTWGKGTNGQLGL---GNVEDRNVPTLVE 626



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 137/275 (49%), Gaps = 34/275 (12%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           +  ER G +  L R+++G       L G+ I   A G   T  +S +GQ++ +G  +FG 
Sbjct: 391 VCEERTGSQ-WLPRQISGP------LAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGV 443

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA-----VLSR------EGRVYTFSW 127
             +G    + V+ P+ VESLK ++V   A G++ TA     +  R       G+++T+  
Sbjct: 444 LGHG--NLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGD 501

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
           G+  RLGH      ++P  +   +E+   VQ++ G   +L +A   +G  +Y++G  + G
Sbjct: 502 GDKGRLGHADLEKKLQPTCVAQLVEH-DFVQVSCGR--MLTVALTRTG-KIYTMGSSVHG 557

Query: 188 KLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           +LG+    ++       +L E+F         +++G++H A +   G V TWG G  G L
Sbjct: 558 QLGNPQAKNKSIAIVEGKLKEEF------VKEISSGSYHVAALTSGGSVYTWGKGTNGQL 611

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G GN E  +VP +V+AL D +   +A G   T  +
Sbjct: 612 GLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAI 646



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 33/305 (10%)

Query: 81  YGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
           +G   T  V S  P+L+E    + V   ++G    A++++ G V+ +  G+  +LGH  +
Sbjct: 283 FGYHSTLQVDSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVD 342

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
             DV    ++ +L+   V  +A G     AL    SG          GG L    RT  +
Sbjct: 343 -MDVSSPTIVESLDGFLVKFVACGEYQTCALT--DSGELFVWGENKYGGNLVCEERTGSQ 399

Query: 199 H-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             PR I    L  +    VA G WH A V   G++ T+G G +G LGHGN +  S PK V
Sbjct: 400 WLPRQISG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458

Query: 258 QALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASLGHNAIADGQGN 306
           ++L  +    VA G + T  + +            G ++++G G+   LGH  +      
Sbjct: 459 ESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKK--- 515

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
                L P  V  L  V    VQ+S    +     T ALT +GK+Y  G+   GQLG   
Sbjct: 516 -----LQPTCVAQL--VEHDFVQVSCGRML-----TVALTRTGKIYTMGSSVHGQLGNPQ 563

Query: 367 VNNQT 371
             N++
Sbjct: 564 AKNKS 568



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 36/322 (11%)

Query: 25  GKRNLLGREVN---GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           G R  LG +V+    +P    SL G  +   A G  +T  ++D+G+++ +G++ +G    
Sbjct: 332 GSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLV 391

Query: 82  GVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH---- 136
             + T     P Q+   L  + +   A G++ TA +S  G+++T+  G    LGH     
Sbjct: 392 CEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQS 451

Query: 137 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCGLGG 187
            + P +VE      +L+ + V  +A G  +  A+             G  +++ G G  G
Sbjct: 452 VSHPKEVE------SLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKG 505

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LGH     +  P  + Q  L+    V V+ G      + + G++ T G   +G LG+  
Sbjct: 506 RLGHADLEKKLQPTCVAQ--LVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQ 563

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + +S+  V   L +     +++G Y    ++  G VY++G G +  LG   + D     
Sbjct: 564 AKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVED----- 618

Query: 308 HANVLTPQLVTSLKQVNERVVQ 329
             NV  P LV +L+   +R VQ
Sbjct: 619 -RNV--PTLVEALR---DRQVQ 634


>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
 gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
          Length = 394

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 46/355 (12%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+   ++   AG+  ++ I + G+++ +G +  G   +  + TK  ++P  V++L N+ 
Sbjct: 34  ALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPE-TKTESTPSQVKALANVK 92

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +VQAAIG +    +  EGR  T++WG +   G   E    +     G  + +        
Sbjct: 93  IVQAAIGGWHCLAVDEEGR--TYAWGGN-EYGQCAEEQQTKEQQNKGESKVLHRDITIPQ 149

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH---------PRLIEQF----QLL 209
            C       Q +    +SV             T+E H         P  I+Q     ++ 
Sbjct: 150 RCAPRLCVRQLTAGGTHSV-----------VLTEEGHVWTWGQPWPPGDIKQISVPVRVQ 198

Query: 210 NLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            L+ V ++A GA+H   + Q G V  WG   YG LG G+ +  S P  V+ L  +  + +
Sbjct: 199 GLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDI 258

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G + +  ++ DG VY +G GE   LG        G+  ++ + PQ V  L    E VV
Sbjct: 259 AAGGWHSMALTPDGAVYGWGRGEHGRLGF-------GDDKSSKMLPQKVHLL--AGEPVV 309

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
           Q+S   +     H+ A T SG++++FG GD G+LG    +     G+P  V + L
Sbjct: 310 QVSCGGT-----HSVAATISGRMFSFGRGDHGRLGY---SGAVTTGHPVEVPVSL 356



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 39/294 (13%)

Query: 26  KRNLLGR----EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           +R  LG     +   TP   ++L  ++I+QAA G    + + + G+ YA+G + +G+   
Sbjct: 66  QRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAE 125

Query: 82  GVQGT------------KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
             Q              + +T PQ       + V Q   G   + VL+ EG V+T+    
Sbjct: 126 EQQTKEQQNKGESKVLHRDITIPQ--RCAPRLCVRQLTAGGTHSVVLTEEGHVWTW---- 179

Query: 130 DARLGHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
               G    P D++    P  + G LEN  V  IA G  + LAL        V++ G   
Sbjct: 180 ----GQPWPPGDIKQISVPVRVQG-LEN--VTMIAVGAFHNLALVQHGE---VWAWGNNE 229

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
            G+LG G       P  ++    L L  V +AAG WH+  +  DG V  WG G +G LG 
Sbjct: 230 YGQLGTGDTQPRSSPVPVKGLTGLVL--VDIAAGGWHSMALTPDGAVYGWGRGEHGRLGF 287

Query: 246 GNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
           G+++   + P+ V  L     + V+ G   +   +  G ++SFG G+   LG++
Sbjct: 288 GDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYS 341



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  WG G  G LG GN + +    VV AL D   + V  G   +  + EDG ++++G  +
Sbjct: 7   VLAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQ 66

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
             +LGH      +        TP  V +L   N ++VQ ++     W  H  A+ E G+ 
Sbjct: 67  RGTLGHPPETKTES-------TPSQVKAL--ANVKIVQAAIGG---W--HCLAVDEEGRT 112

Query: 352 YAFGAGDKGQLGIE-LVNNQTERGNPERVDIDLS 384
           YA+G  + GQ   E     Q  +G  + +  D++
Sbjct: 113 YAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDIT 146


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 47/365 (12%)

Query: 31  GREVNGTP---LYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  +N T    L  ++L+   ++ A   A G    +L++  G+++++G+   G+  +G++
Sbjct: 265 GNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE 324

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
               V  P+ + S++ +     A G+F T  +++ G +Y  SWG+       LGH  E +
Sbjct: 325 TD--VQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHGNESS 380

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              P  + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R     P
Sbjct: 381 CWIPKRVTGALQGLYVSYVACGPWHTAVVA---SSGQLFTFGDGSFGALGHGDRRSTSVP 437

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVV-------------GQDGRVCTWGWGRYGCLGHGN 247
           R ++   L  L    VA G WH A +                G+V TWG G  G LGHG+
Sbjct: 438 REVKI--LSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGD 495

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + + +P+ V +L++     VA G   T  ++  G VY+ G      LG+      +GN 
Sbjct: 496 NDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGN---PTAKGNF 552

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
            A            +V   +V+ S+      + H   LT   ++Y +G G  GQLG   +
Sbjct: 553 PA------------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTI 600

Query: 368 NNQTE 372
            N+ E
Sbjct: 601 ENKRE 605



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 37/312 (11%)

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 145
           T+ V  P+ +ES   +     A G     +++++G ++++  G   +LGH  E  DV+  
Sbjct: 272 TEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLE-TDVQQP 330

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             + ++  +    +A G  +  A+  Q   +  +  G      LGHG+ +    P+ +  
Sbjct: 331 KFISSVRGLGFKSLACGDFHTCAIT-QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTG 389

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             L  L    VA G WH AVV   G++ T+G G +G LGHG+    SVP+ V+ L+ +  
Sbjct: 390 -ALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIV 448

Query: 266 IHVATGDYTTFVV-------------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
             VA G + T  +             S  G V+++G GE   LGH       G+  A +L
Sbjct: 449 TKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGH-------GDNDAQLL 501

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P+ V SL   NE + Q++  +S+     T +LT +G +Y  G+   GQLG     N T 
Sbjct: 502 -PECVISLS--NENICQVACGHSL-----TVSLTSTGHVYTMGSTAYGQLG-----NPTA 548

Query: 373 RGN-PERVDIDL 383
           +GN P RV+ D+
Sbjct: 549 KGNFPARVEGDI 560



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 21/249 (8%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +LQG+ +   A G   T +++ +GQ++ FG  SFG   +G + +  V  P+ V+ L  + 
Sbjct: 390 ALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSV--PREVKILSGLI 447

Query: 103 VVQAAIGNFFTAVL-------------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           V + A G + TA L             S  G+V+T+  G   +LGH      + P  ++ 
Sbjct: 448 VTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVI- 506

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           +L N  + Q+A G+   ++L    S   VY++G    G+LG+ +       R+  +  ++
Sbjct: 507 SLSNENICQVACGHSLTVSLT---STGHVYTMGSTAYGQLGNPTAKGNFPARV--EGDIV 561

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
                 +A G++H AV+     + TWG G  G LGHG  E +  P VV  L + +   + 
Sbjct: 562 EASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAIT 621

Query: 270 TGDYTTFVV 278
            G   T V+
Sbjct: 622 CGSNFTAVI 630



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G G  L + +  D   P+ +E   +L+ Q   +A G  HA +V + G + +WG G+ G L
Sbjct: 263 GTGNSL-NSTTEDVLLPKALESTIVLDAQN--IACGKCHAVLVTKQGEIFSWGEGKGGKL 319

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           GHG E     PK + ++  +    +A GD+ T  +++ GD+YS+G G      HN    G
Sbjct: 320 GHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGT-----HNVDLLG 374

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            GN  ++   P+ VT   Q     + +S      W  HT  +  SG+L+ FG G  G LG
Sbjct: 375 HGN-ESSCWIPKRVTGALQ----GLYVSYVACGPW--HTAVVASSGQLFTFGDGSFGALG 427


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 42/358 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S   + + + + G     L++  G+V+ +G+ S G   + V     + +P++VES
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMD--MGNPKIVES 355

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 153
           L  + V   + G + T  L+  G +YT  WG++      +G   + +   P  L G L  
Sbjct: 356 LTGVLVKSVSCGEYQTCALTHSGELYT--WGDNGSGIDLVGERRKRSQWIPSRLSGPLNG 413

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             +  +A G  ++  ++   +   +++ G G  G LGHG       P+ +E    L ++ 
Sbjct: 414 TSISNVACGEWHMAIVS---TSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVK- 469

Query: 214 VVVAAGAWHAAVV-----------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
              A G WH A +            + G++ TWG G  G LGHG++E + +P  V  L D
Sbjct: 470 -AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVD 528

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
              + V+ G   T  ++  G VY+ G         +A+    GN  A   +  +V   K 
Sbjct: 529 HDFVQVSCGRMLTVGLTCLGTVYTMG---------SAVHGQLGNPQAKDKSIAIVGG-KL 578

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +E V +IS       + H  ALT  G LY +G G  GQLG+    +  +R +P  V+
Sbjct: 579 KDEFVKEISSG-----SYHVAALTSKGSLYTWGMGANGQLGL---GDTEDRNSPAVVE 628



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           D++ ER  +   +   ++G       L G  I   A G     ++S +GQ++ +G  +FG
Sbjct: 391 DLVGERRKRSQWIPSRLSGP------LNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFG 444

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL-----------SREGRVYTFS 126
              +G    + ++ P+ VESL  ++V  AA G + TA +           ++ G+++T+ 
Sbjct: 445 VLGHG--KLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWG 502

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
            G+  RLGH  +   + P   +  L +   VQ++ G    + L C  +   VY++G  + 
Sbjct: 503 DGDKGRLGHGDQERKLLP-TCVAQLVDHDFVQVSCGRMLTVGLTCLGT---VYTMGSAVH 558

Query: 187 GKLGHGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
           G+LG+    D+       +L ++F         +++G++H A +   G + TWG G  G 
Sbjct: 559 GQLGNPQAKDKSIAIVGGKLKDEF------VKEISSGSYHVAALTSKGSLYTWGMGANGQ 612

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATG 271
           LG G+ E  + P VV+AL D +   +A G
Sbjct: 613 LGLGDTEDRNSPAVVEALRDRQVESIACG 641



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 39/308 (12%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VY FG  +      G+Q   L+  P+L+ES   + V + ++G    A++++ G V+ +  
Sbjct: 282 VYRFGNQN------GMQSDALL--PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
           G+   LGH    +   P  ++ +L  + V  ++ G     AL    SG  +Y+ G    G
Sbjct: 334 GSGGXLGHKVNMDMGNPK-IVESLTGVLVKSVSCGEYQTCALT--HSG-ELYTWGDNGSG 389

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
               G R              LN   +  VA G WH A+V   G++ T+G G +G LGHG
Sbjct: 390 IDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHG 449

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCGESASL 295
             E  S PK V++L+ +     A G + T  + E            G ++++G G+   L
Sbjct: 450 KLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRL 509

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH       G++   +L P  V  L  V+   VQ+S    +     T  LT  G +Y  G
Sbjct: 510 GH-------GDQERKLL-PTCVAQL--VDHDFVQVSCGRML-----TVGLTCLGTVYTMG 554

Query: 356 AGDKGQLG 363
           +   GQLG
Sbjct: 555 SAVHGQLG 562


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 45/332 (13%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+  + L G+  I  +AG   T+ +   G V+A+G++S+G+   G   T    +P  V+
Sbjct: 1069 TPVQVQGLTGVTAI--SAGDAHTVALRRDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQ 1124

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGN--DARLGHHTEPNDVEPHPLLGTL 151
             L  +  +  A G+  T  L ++G V+ +   SWG   D    H   P  V+   L G  
Sbjct: 1125 GLTGVIAI--AAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATP--VQVQGLTG-- 1178

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                V+ IAAG  + +AL    +   V++ G    G+LG G+ T    P  ++    +  
Sbjct: 1179 ----VIAIAAGSLHTVALRQDGT---VWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVT- 1230

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
                +AAG +H A V QDG   TWG+  +G LG G     + P  VQ L  V A+  A G
Sbjct: 1231 ---TIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAG 1285

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
               T VV EDG V+++G      LG+ +  D    R   V    L  +      R     
Sbjct: 1286 YAHTVVVGEDGTVWAWGNNSGTQLGNGSSTD----RSTPVQVEALTGAFSLAAGRF---- 1337

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     HT A++  G  + +G  + GQ+G
Sbjct: 1338 ---------HTVAMSPDGAGWGWGRNNLGQVG 1360



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 129/268 (48%), Gaps = 22/268 (8%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+  + L G+  I  AAG+  T+ +   G V+A+G++S+G+   G   T    +P  V+
Sbjct: 1119 TPVQVQGLTGV--IAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGT--TTHRATPVQVQ 1174

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L  +  +  A G+  T  L ++G V+ + + +  +LG  T    + P  + G      V
Sbjct: 1175 GLTGVIAI--AAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL---TGV 1229

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
              IAAGY +  A+  +  G A ++ G  L G+LG G+ TD   P  ++    ++     +
Sbjct: 1230 TTIAAGYFHTAAV--RQDGTA-WTWGFNLWGQLGDGTFTDRATPVQVQGLTGVS----AL 1282

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGC--LGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            AAG  H  VVG+DG V  W WG      LG+G+    S P  V+AL    A  +A G + 
Sbjct: 1283 AAGYAHTVVVGEDGTV--WAWGNNSGTQLGNGSSTDRSTPVQVEALT--GAFSLAAGRFH 1338

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIAD 302
            T  +S DG  + +G      +G    AD
Sbjct: 1339 TVAMSPDGAGWGWGRNNLGQVGDGTTAD 1366



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 154/346 (44%), Gaps = 44/346 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  + L G+  I  AAG   T+     G V+A+G + +G+   G    +L  +P  V+
Sbjct: 363 TPVQVQGLTGVTAI--AAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRL--TPVQVQ 418

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENI 154
            L  +  +  A G  +T    ++G V+  +WG++ R  LG         P  + G LE I
Sbjct: 419 GLTGVTAI--AAGYLYTVASKQDGTVW--AWGDNKRSQLGEGAVSQRHTPGEVQG-LEGI 473

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
               IAA    LL +A +  G  V++ G    G+LG G+ T     R +   Q+  L  V
Sbjct: 474 TA--IAA--SNLLTVAVRQDGT-VWAWGDNARGQLGDGTTT-----RRLTPVQVQGLAGV 523

Query: 215 V-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VAA  +H   V QDG V  WG G +G LG G     S P  VQ L  V AI  A G  
Sbjct: 524 TAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVTAI--AAGSN 581

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  + +DG V+++G      LG     DG    H   LTP  V  +       V I+  
Sbjct: 582 HTVALRQDGTVWAWGFNNYGQLG-----DGTTAGH---LTPVQVPGVT----GAVAIAAG 629

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            S     HT AL + G ++ +G    GQLG       T R +P +V
Sbjct: 630 GS-----HTVALLQDGTVWTWGYNIWGQLGD---GTTTHRHSPVQV 667



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 145/344 (42%), Gaps = 36/344 (10%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+  + L        AAG   T+ +   G V+A+G +  G+   G     L      V+ 
Sbjct: 814  PVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQG 873

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            L ++  +  A G +  A   ++G ++T+   +  +LG       + P  + G ++   V 
Sbjct: 874  LMDVTAM--AAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VT 928

Query: 158  QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
             +AAG  Y +A A Q     +++ G    G+LG G  +    P  ++      +    +A
Sbjct: 929  AMAAG-GYHMAAAGQDG--TLWTWGLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMA 981

Query: 218  AGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTT 275
            AG +H A  GQDG + TWG   YG LG G  ++    V   VQ L  V AI  A G   T
Sbjct: 982  AGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAI--AAGFSHT 1039

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              V +DG V+S+G      LG            A  LTP  V  L  V      IS    
Sbjct: 1040 LAVRQDGTVWSWGGNAYGQLGDGTT--------AQSLTPVQVQGLTGVTA----ISAG-- 1085

Query: 336  IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
               +AHT AL   G ++A+G    GQLG       T R  P +V
Sbjct: 1086 ---DAHTVALRRDGTVWAWGRNSWGQLGD---GTTTHRATPVQV 1123



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 39/331 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    + G   I  AAG   T+ +   G V+ +G + +G+   G   T    SP  V+
Sbjct: 613 TPVQVPGVTGAVAI--AAGGSHTVALLQDGTVWTWGYNIWGQLGDGT--TTHRHSPVQVQ 668

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L ++  +  A  N  T  + ++G V+T+   +  +LG  T    + P  + G  +   +
Sbjct: 669 GLADVIAI--ATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAI 726

Query: 157 VQIAAGYCYLLALACQPSGM----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
                     L  + Q   M     +++ G    G+LG G+ T    P  ++      + 
Sbjct: 727 ----------LTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MD 772

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
              +AAG +H A  GQDG + TWG   YG LG G      +P  VQ L    A  +A GD
Sbjct: 773 VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGD 832

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             T  V +DG V+++G   S  LG            A  LTP  V    QV   +   ++
Sbjct: 833 SHTVAVRQDGTVWAWGSNFSGQLGDGTT--------AQSLTPVQV----QVQGLMDVTAM 880

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               Y   H  A  + G L+ +G    GQLG
Sbjct: 881 AAGGY---HMAAAGQDGTLWTWGLNSYGQLG 908



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 152/361 (42%), Gaps = 48/361 (13%)

Query: 27  RNLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           RN  G+  +GT      P+  + L G+  +  AAG   +  +   G V+ +G +  G+  
Sbjct: 147 RNSSGQLGDGTSIQRFSPVQVQGLTGVTAV--AAGRNHSAALGQGGTVWTWGDNLVGQLG 204

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
            G    +L  +P  V+ L  +  + A   +  T  L ++G V+  +WGN++  +LG  T 
Sbjct: 205 DGTSTQRL--TPVQVQGLTGVIAISA--NDSETVALRQDGTVW--AWGNNSSGQLGDGTT 258

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
                P  +LG      V  IAAG  + +AL    +   +++ G    G+LG+G+     
Sbjct: 259 TVRFTPVQVLGL---TGVTAIAAGGGFAVALRQDGT---LWAWGSNSRGQLGNGTTFGSY 312

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P   EQ Q L     + A+G  H   + QDG +  WG    G LG G       P  VQ
Sbjct: 313 RP---EQVQGLTGVTAIAASGI-HTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQ 368

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L  V AI  A G   T    +DG V+++G  E   LG     DG   R    LTP  V 
Sbjct: 369 GLTGVTAI--AAGYLYTVASKQDGTVWAWGDNEWGQLG-----DGTTTRR---LTPVQVQ 418

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
            L  V                 +T A  + G ++A+G   + QLG   V+   +R  P  
Sbjct: 419 GLTGVTAIAAGY---------LYTVASKQDGTVWAWGDNKRSQLGEGAVS---QRHTPGE 466

Query: 379 V 379
           V
Sbjct: 467 V 467



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 137/314 (43%), Gaps = 39/314 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG   T+  S  G V+ +G++S G+   G    +   SP  V+ L  +  V  A G   
Sbjct: 127 AAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRF--SPVQVQGLTGVTAV--AAGRNH 182

Query: 113 TAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
           +A L + G V+T  WG++   +LG  T    + P  + G      V+ I+A     +AL 
Sbjct: 183 SAALGQGGTVWT--WGDNLVGQLGDGTSTQRLTPVQVQGL---TGVIAISANDSETVALR 237

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 229
              +   V++ G    G+LG G+ T    P      Q+L L  V  +AAG   A  + QD
Sbjct: 238 QDGT---VWAWGNNSSGQLGDGTTTVRFTP-----VQVLGLTGVTAIAAGGGFAVALRQD 289

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G +  WG    G LG+G       P+ VQ L  V AI  A+G + T  + +DG ++++G 
Sbjct: 290 GTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI-AASGIH-TVALRQDGTLWAWGN 347

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
             S  LG     DG         TP  V  L  V                 +T A  + G
Sbjct: 348 NSSGQLG-----DGTTTVR---FTPVQVQGLTGVTAIAAGY---------LYTVASKQDG 390

Query: 350 KLYAFGAGDKGQLG 363
            ++A+G  + GQLG
Sbjct: 391 TVWAWGDNEWGQLG 404



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 118/281 (41%), Gaps = 43/281 (15%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           V+ A  GN   AV  ++G V+  +WGN  D +LG  T      P  ++          IA
Sbjct: 76  VLAAGNGNHTLAV-RQDGTVW--AWGNNDDGQLGDGTTTRRFSPVQVM-----TGATAIA 127

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           AG  + +A +   +   V++ G    G+LG G+      P  ++    +      VAAG 
Sbjct: 128 AGIYHTVAASQDGT---VWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVT----AVAAGR 180

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            H+A +GQ G V TWG    G LG G       P  VQ L  V  I ++  D  T  + +
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGV--IAISANDSETVALRQ 238

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DG V+++G   S  LG     DG         TP  V  L  V                 
Sbjct: 239 DGTVWAWGNNSSGQLG-----DGTTTVR---FTPVQVLGLTGVTAIAAG---------GG 281

Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN--PERV 379
              AL + G L+A+G+  +GQLG     N T  G+  PE+V
Sbjct: 282 FAVALRQDGTLWAWGSNSRGQLG-----NGTTFGSYRPEQV 317



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 20/220 (9%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP+  + L G+  I  AAG+  T+ +   G V+A+G +  G+   G    +L  +P  V+
Sbjct: 1169 TPVQVQGLTGV--IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRL--TPAQVQ 1224

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L  +  +  A G F TA + ++G  +T+ +    +LG  T  +   P  + G      V
Sbjct: 1225 GLTGVTTI--AAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL---TGV 1279

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
              +AAGY + + +    +   V++ G   G +LG+GS TD   P  +E           +
Sbjct: 1280 SALAAGYAHTVVVGEDGT---VWAWGNNSGTQLGNGSSTDRSTPVQVEAL----TGAFSL 1332

Query: 217  AAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECESVP 254
            AAG +H   +  DG    WGWGR   G +G G       P
Sbjct: 1333 AAGRFHTVAMSPDG--AGWGWGRNNLGQVGDGTTADRPTP 1370



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 70/169 (41%), Gaps = 28/169 (16%)

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           PV+ A    H   V QDG V  WG    G LG G       P  VQ +    AI  A G 
Sbjct: 75  PVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSP--VQVMTGATAI--AAGI 130

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ--I 330
           Y T   S+DG V+++G   S  LG     DG              TS+++ +   VQ   
Sbjct: 131 YHTVAASQDGTVWTWGRNSSGQLG-----DG--------------TSIQRFSPVQVQGLT 171

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +T       H+ AL + G ++ +G    GQLG       T+R  P +V
Sbjct: 172 GVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGD---GTSTQRLTPVQV 217


>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
 gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 38/264 (14%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK------ 99
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP  V  +       
Sbjct: 219 GVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPVPCVDPSYGKD 277

Query: 100 --------------------NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
                                 +V   A G   +AV++  G + TF WG   + G  +  
Sbjct: 278 RPAPFSRGGMTSEGHGFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 337

Query: 140 NDVEP---HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
           +++ P    PLLG    I +  +AAG  + +   C  +   VY+ G    G+LG GS   
Sbjct: 338 DELSPICVSPLLG----IRIAGVAAGLWHTI---CVSADGDVYAFGGNQFGQLGTGSDQA 390

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           E  PRL++   L ++   VV+ GA H+A+V +DG+V  WGW +YG LG G+    ++P  
Sbjct: 391 ETTPRLLDAPSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSP 450

Query: 257 VQALNDVKAIHVATGDYTTFVVSE 280
           V  +      +VA G + T +++E
Sbjct: 451 V-TIEGCIPRNVACGWWHTLLLAE 473



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 54/308 (17%)

Query: 79  AEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
           AE    G + +++ P LV     + +   A G   T  LS  G+V+ + +G + +LG  +
Sbjct: 197 AESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 256

Query: 138 EPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
               V  PHP       +P V  + G         +P+                 G  T 
Sbjct: 257 RIRMVSSPHP-------VPCVDPSYG-------KDRPA-------------PFSRGGMTS 289

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           E H      F++       +A G  H+AV+   G + T+GWG YG  G G+ + E  P  
Sbjct: 290 EGH-----GFRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPIC 344

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V  L  ++   VA G + T  VS DGDVY+FG  +   L       G G+  A   TP+L
Sbjct: 345 VSPLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQL-------GTGSDQAET-TPRL 396

Query: 317 V--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
           +   SL+ ++ +VV            H+  + E GK++ +G    GQLG+    +  +R 
Sbjct: 397 LDAPSLEDIHAKVVSCGAR-------HSAIVAEDGKVFCWGWNKYGQLGL---GDVIDRN 446

Query: 375 NPERVDID 382
            P  V I+
Sbjct: 447 IPSPVTIE 454



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 6/139 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+    L GIRI   AAG   T+ +S  G VYAFG + FG  + G    +  T+P+L++
Sbjct: 341 SPICVSPLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFG--QLGTGSDQAETTPRLLD 398

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL++I     + G   +A+++ +G+V+ + W    +LG     +   P P+  T+E  
Sbjct: 399 APSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPV--TIEGC 456

Query: 155 PVVQIAAGYCYLLALACQP 173
               +A G+ + L LA  P
Sbjct: 457 IPRNVACGWWHTLLLAESP 475


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 24/292 (8%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +VY +G +S  +   G     LV  P+L  S  +   ++A  G + T V+  +G V+   
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILV--PKLATSFGSAQQIEA--GQYCTFVIFPDGFVHACG 420

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
            G+  RLG     N  +   L    E +     ++       LA    G  VYS G G  
Sbjct: 421 KGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDG-KVYSWGDGDY 479

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           GKLGHG+   +K P+L+E   L N     +AAG  H+A V +DG + TWG G YG LGHG
Sbjct: 480 GKLGHGNSQTQKIPKLVEG-ALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHG 538

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQG 305
           +    +VP  V+ + +V    VA G   T  VS+DG  V+SFG G++  LGH+       
Sbjct: 539 DNNSRNVPVQVKDVANVG--QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS-----DT 591

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
           NR   V  P+++ +L+ +  R V      S+       ALT +G++Y +G G
Sbjct: 592 NR---VYKPKVIEALQGMVIRKVCCGSQCSL-------ALTSTGQVYVWGCG 633



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 27/316 (8%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAI 108
           Q  AG   T +I   G V+A GK S+G    G     T+L       E L          
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGS 458

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
               T  L+ +G+VY++  G+  +LGH        P  + G L N  V  IAAGY +  A
Sbjct: 459 DGH-TLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAA 517

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +        +Y+ G G  G+LGHG       P  ++    +      VA G+ H   V Q
Sbjct: 518 VT---EDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQ 570

Query: 229 DGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           DG+ V ++G G  G LGH +      PKV++AL  +    V  G   +  ++  G VY +
Sbjct: 571 DGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVW 630

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           GCG S          G G+  A   TP+L+ +L+  +  VV IS+ +S     H  ALT+
Sbjct: 631 GCGPSL---------GTGSVDATSATPKLLLALQ--SHSVVDISVGDS-----HCVALTQ 674

Query: 348 SGKLYAFGAGDKGQLG 363
              +YA+G    GQ G
Sbjct: 675 DNNVYAWGNNSMGQCG 690



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 15/226 (6%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG   +  +++ G++Y +G+  +G   +G   ++ V  P  V+ + N  V Q A G+  
Sbjct: 509 AAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNV--PVQVKDVAN--VGQVACGSAH 564

Query: 113 TAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 171
           T  +S++G+ V++F  G++ +LGH ++ N V    ++  L+ + + ++  G    LAL  
Sbjct: 565 TVCVSQDGQTVWSFGSGDNGKLGH-SDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALT- 622

Query: 172 QPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
             S   VY  GCG    LG GS       P+L+   Q  ++  V ++ G  H   + QD 
Sbjct: 623 --STGQVYVWGCG--PSLGTGSVDATSATPKLLLALQSHSV--VDISVGDSHCVALTQDN 676

Query: 231 RVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTT 275
            V  WG    G  G G+     + PK V  L+ V    ++ G   T
Sbjct: 677 NVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHT 722



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 20/175 (11%)

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           +L +Q+    ++  +    ++H      +  V  WG      L  G+ +   VPK+  + 
Sbjct: 335 KLADQYAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSF 394

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
              + I    G Y TFV+  DG V++ G G    LG   + D               T L
Sbjct: 395 GSAQQIE--AGQYCTFVIFPDGFVHACGKGSYGRLG---LGDSTNQ-----------TQL 438

Query: 321 KQVN--ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
           K++N     +  S+++S   + HT ALT  GK+Y++G GD G+LG    N+QT++
Sbjct: 439 KRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHG--NSQTQK 491



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG-KDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +LQG+ I +   G+  ++ ++  GQVY +G   S G     V  T    +P+L+ 
Sbjct: 597 PKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTG--SVDATS--ATPKLLL 652

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLE 152
           +L++  VV  ++G+     L+++  VY  +WGN++      GH T P   +P  +LG L+
Sbjct: 653 ALQSHSVVDISVGDSHCVALTQDNNVY--AWGNNSMGQCGQGHCTTPI-TKPKKVLG-LD 708

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYS 180
            + V QI+AG  + +A    P    V S
Sbjct: 709 GVAVHQISAGTSHTVAWTALPMDRQVVS 736


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 30/317 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ I++ GQVY+ G + +G+  +     +L    QL+  L      + A G+
Sbjct: 38  QIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRL----QLIPGLDAFVFKKIACGS 93

Query: 111 FFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             T  ++  G++  FSWG + +  LG ++         ++  L    +VQIA G  + +A
Sbjct: 94  CHTLAVNEWGQL--FSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIA 151

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    +   +YS G    G+LG GS T  E  P+ I    L  +    +A G +H  V+ 
Sbjct: 152 LT---NDGELYSWGSNREGQLGIGSHTVTEIKPKRI--ITLAAVPIAFIACGGYHTVVIS 206

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           + G V  WG   +G LG  + +   VP  ++ L + K  + A G+  +  ++ DG V++ 
Sbjct: 207 KSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTC 266

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G    LGH     G G    N + P+ V  L  +   V QIS         HT AL  
Sbjct: 267 GAGMYGQLGH-----GNG---MNEILPRQVMEL--MGSTVTQISCGKR-----HTLALVP 311

Query: 348 S-GKLYAFGAGDKGQLG 363
           S G++YA+G G  GQLG
Sbjct: 312 SRGRVYAWGLGGAGQLG 328



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 17/262 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIF 102
           L      + A G+  T+ +++ GQ++++G +  G+   G+        +P++V++L    
Sbjct: 81  LDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL--GLNSVDCTERTPRMVKALGTSV 138

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQ 158
           +VQ A G   +  L+ +G +Y  SWG++      +G HT   +++P  ++ TL  +P+  
Sbjct: 139 IVQIACGIEHSIALTNDGELY--SWGSNREGQLGIGSHT-VTEIKPKRII-TLAAVPIAF 194

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           IA G  + + ++   SG+ V++ G    G+LG         P  +    L N +    A 
Sbjct: 195 IACGGYHTVVIS--KSGV-VFAWGRNTFGQLGLNDTQQRIVPCQLRT--LRNAKVCYAAC 249

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFV 277
           G   +  +  DG V T G G YG LGHGN   E +P+ V  L       ++ G  +T  +
Sbjct: 250 GEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLAL 309

Query: 278 VSEDGDVYSFGCGESASLGHNA 299
           V   G VY++G G +  LG+ A
Sbjct: 310 VPSRGRVYAWGLGGAGQLGNRA 331



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 16/226 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQL 94
           TP   ++L    I+Q A G   ++ +++ G++Y++G +   E + G+ G+  VT   P+ 
Sbjct: 127 TPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNR--EGQLGI-GSHTVTEIKPKR 183

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           + +L  + +   A G + T V+S+ G V  F+WG +   +LG +     + P  L  TL 
Sbjct: 184 IITLAAVPIAFIACGGYHTVVISKSGVV--FAWGRNTFGQLGLNDTQQRIVPCQL-RTLR 240

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           N  V   A G  + + L        V++ G G+ G+LGHG+  +E  PR +   +L+   
Sbjct: 241 NAKVCYAACGEEFSVFLTLDG---GVFTCGAGMYGQLGHGNGMNEILPRQV--MELMGST 295

Query: 213 PVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              ++ G  H  A+V   GRV  WG G  G LG+      + P VV
Sbjct: 296 VTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVV 341



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 30/257 (11%)

Query: 125 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           F WG+       LG   + N   P  +     N  V QIA G  Y + +    +   VYS
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPRQVDFAKAN-EVEQIACGENYTVTIT---NDGQVYS 57

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G    G+LGH      K  +LI        + +  A G+ H   V + G++ +WG    
Sbjct: 58  CGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKI--ACGSCHTLAVNEWGQLFSWGCNMK 113

Query: 241 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           G LG  + +C E  P++V+AL     + +A G   +  ++ DG++YS+G      LG   
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLG--- 170

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
                G+     + P+ + +L  V    +            HT  +++SG ++A+G    
Sbjct: 171 ----IGSHTVTEIKPKRIITLAAVPIAFIACG-------GYHTVVISKSGVVFAWGRNTF 219

Query: 360 GQLGIELVNNQTERGNP 376
           GQLG+   N+  +R  P
Sbjct: 220 GQLGL---NDTQQRIVP 233



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           ++  G  + G+LG G   DE    PR ++  +   ++ +  A G  +   +  DG+V + 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQI--ACGENYTVTITNDGQVYSC 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G   YG LGH  E+     +++  L+      +A G   T  V+E G ++S+GC     L
Sbjct: 59  GNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G N++   +        TP++V +L      +VQI+         H+ ALT  G+LY++G
Sbjct: 117 GLNSVDCTER-------TPRMVKALG--TSVIVQIACGIE-----HSIALTNDGELYSWG 162

Query: 356 AGDKGQLGI 364
           +  +GQLGI
Sbjct: 163 SNREGQLGI 171


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 37/312 (11%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN--DVEPH 145
           L+++P L ES +    V A+  NF + V+ R G V   ++      G  ++P+   +EP 
Sbjct: 19  LISTPLLPESWRLCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSDPSWRTLEPL 78

Query: 146 ------PLLGTLENIP---VVQIAAGYCYLLA-----LACQPSGMAVYSVGCGLGGKLGH 191
                 PL  T  N      V++ +G   L +     +  Q SG  V S G G  G+LGH
Sbjct: 79  ESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGH 138

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEEC 250
           G   D   P  +  F   ++  V V  GA +     + G+ V +WGWG +G LGHG+   
Sbjct: 139 GDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSD 196

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
             +P  ++AL  ++   ++ GD     V+ +  V S+G  ++  LG     D        
Sbjct: 197 LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSH------ 250

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
              PQ + + + +  ++V            H+ A+TE G LY +G G  G LG+    + 
Sbjct: 251 --VPQKILAFEGIRIKMVAAGA-------EHSVAITEDGDLYGWGWGRYGNLGL---GDT 298

Query: 371 TERGNPERVDID 382
            +R  PE+V+ID
Sbjct: 299 NDRLIPEKVNID 310



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 151/356 (42%), Gaps = 45/356 (12%)

Query: 29  LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           +L R +  TPL   S +    + A+A   R+ ++   G V       F  A  G   +  
Sbjct: 14  MLARFLISTPLLPESWRLCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSDPSWR 73

Query: 89  VTSPQLVESLKNIFV--------------VQAAIGNFFTAVLSR-----EGRVYTFSWG- 128
              P  +ES+  + +              V + + N F+++ +       G V   SWG 
Sbjct: 74  TLEP--LESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGNVVC-SWGR 130

Query: 129 -NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
             D +LGH    + + P  L    +   +V +  G  Y +A +   SG  VYS G G  G
Sbjct: 131 GEDGQLGHGDTDDRLLPTKL-SAFDGQDIVSVTCGADYTVARS--KSGKDVYSWGWGDFG 187

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LGHG  +D   P  I   Q L ++ +  + G  H   V  + +V +WG  + G LG G 
Sbjct: 188 RLGHGDPSDLFIPHPIRALQGLRIKQI--SCGDCHCLAVTMENKVLSWGRNQNGELGLGT 245

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            +   VP+ + A   ++   VA G   +  ++EDGD+Y +G G   +LG     D     
Sbjct: 246 TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND----- 300

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               L P+ V       +++V +S      W  HT +++ SG LY  G    GQLG
Sbjct: 301 ---RLIPEKVNI---DGDKIVMVSCG----WR-HTISISSSGGLYTHGWSKYGQLG 345



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 60/247 (24%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFS 126
           V ++G+   G+  +G    +L+  P  + +     +V    G  +T   S+ G+ VY++ 
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLL--PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 182

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
           WG+  RLGH    +   PHP+   L+ + + QI+ G C+ LA+  +     V S G    
Sbjct: 183 WGDFGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVTMENK---VLSWGRNQN 238

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG----- 241
           G+LG G+  D   P+ I  F+ + ++  +VAAGA H+  + +DG +  WGWGRYG     
Sbjct: 239 GELGLGTTKDSHVPQKILAFEGIRIK--MVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 242 ----------------------------------------------CLGHGNEECESVPK 255
                                                          LGHG+ E   VP+
Sbjct: 297 DTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPR 356

Query: 256 VVQALND 262
            VQAL+D
Sbjct: 357 KVQALSD 363



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   + +  P    + +GIRI   AAGA  ++ I++ G +Y +G   +G    G
Sbjct: 237 QNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
               +L+     ++  K   +V  + G   T  +S  G +YT  W    +LGH
Sbjct: 297 DTNDRLIPEKVNIDGDK---IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGH 346


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 23/264 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           II  + GA     I   G+++ +G    G    G++  K V  P  V+ LK+  +V    
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWGLCDHGR--LGLKSGKDVPYPTRVDFLKDEVIVDVTC 272

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G + +A +S + +V+T+  G+  +LGH  + ++  P   +  L +IP+VQ+A GY ++ A
Sbjct: 273 GMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRS-VAALHHIPIVQVALGYEHMAA 331

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-----------PVVVA 217
           L+       VY+ G G  G+LGHG       P+ +    LL L+           PV++A
Sbjct: 332 LSLDGD---VYTWGEGEHGQLGHGDLNSCSTPKKL----LLELENTTGEVADVGSPVLLA 384

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTT 275
            GA    ++   GR+ ++G   +G LG G +   + P ++ +  ++  + +H++ GD   
Sbjct: 385 CGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHC 444

Query: 276 FVVSEDGDVYSFGCGESASLGHNA 299
             V+  G+VY++G G   ++G  A
Sbjct: 445 AAVTSKGNVYTWGQGCFGAVGKPA 468



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 14/250 (5%)

Query: 118 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           R+  +Y F+WG        T     +P P L+ TL  +    I   Y      A   +G 
Sbjct: 174 RDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTG- 232

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
            +++ G    G+LG  S  D  +P  ++    L  + +V V  G + +A +  D +V TW
Sbjct: 233 KLFTWGLCDHGRLGLKSGKDVPYPTRVD---FLKDEVIVDVTCGMYSSACISHDMKVFTW 289

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G G  G LGH  +  E +P+ V AL+ +  + VA G      +S DGDVY++G GE   L
Sbjct: 290 GSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQL 349

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH-TFALTESGKLYAF 354
           GH       G+ ++     +L+  L+     V  +     +   A  T  LT+ G+L +F
Sbjct: 350 GH-------GDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISF 402

Query: 355 GAGDKGQLGI 364
           G  + G LG+
Sbjct: 403 GMSEFGALGL 412



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 27/286 (9%)

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           T  Q    L+ I + + A+ +   ++LS +G     S      L   T      P P L 
Sbjct: 80  TPNQAPRFLEQISISEGAVDSEAHSLLSPQGTSEENSKVEQGALDSSTAFFPTAPQPCLL 139

Query: 150 TLENIPVVQIAA---------GYCYLLALACQP---SGMAVYSVGCGLGGKLGHGSRTDE 197
             E   V  +AA               AL+ QP     + +++ GC    +LG G    +
Sbjct: 140 DAEKQLVADVAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQ 199

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             P+L+     L    + V+ GA H A +   G++ TWG   +G LG  + +    P  V
Sbjct: 200 PFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRV 259

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             L D   + V  G Y++  +S D  V+++G G    LGH   +D           P+ V
Sbjct: 260 DFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE--------WLPRSV 311

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +L  +   +VQ++L        H  AL+  G +Y +G G+ GQLG
Sbjct: 312 AALHHIP--IVQVALGYE-----HMAALSLDGDVYTWGEGEHGQLG 350



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 13/251 (5%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+    G   +  IS   +V+ +G  S G+  +  +  + +  P+ V +L +I +VQ A+
Sbjct: 267 IVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWL--PRSVAALHHIPIVQVAL 324

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G    A LS +G VYT+  G   +LGH    +   P  LL  LEN        G   LLA
Sbjct: 325 GYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLA 384

Query: 169 LACQPSGM-----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
                + +      + S G    G LG G +     P LI    +   + V ++AG  H 
Sbjct: 385 CGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHC 444

Query: 224 AVVGQDGRVCTWGWGRYGCLG------HGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           A V   G V TWG G +G +G      + N      P  ++   D +A   + G   T +
Sbjct: 445 AAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVI 504

Query: 278 VSEDGDVYSFG 288
           +S+DG V   G
Sbjct: 505 LSKDGCVLVLG 515


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 36/323 (11%)

Query: 61   LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTAVLS 117
            ++++ G VY +G+ +       + G   +     P  +ESL +  VV  +IG    A + 
Sbjct: 763  VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSIGFCHGAAVR 820

Query: 118  REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
              G + T+  G + +LGH    N +EP  ++ +L +  + Q+  G  + +   C      
Sbjct: 821  ANGELLTWGVGENGQLGHGDTNNQIEPK-IIQSLTSFWITQVQCGEKHTI---CLTKNGK 876

Query: 178  VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
            VYS G    G+LG G  T    P  +   +  N+  + +A+G+ H AV+     V  +G 
Sbjct: 877  VYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNV--LQIASGSTHCAVLTTSKEVLVFGN 934

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G       G     S+P +V +L  +    +  G Y+T  ++E GDVY++G G+   LGH
Sbjct: 935  GA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGH 988

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                   GN  +   +P+L+ +L+  N+ + QIS         HT  LT+SG+++  G  
Sbjct: 989  G------GN--STETSPKLIEALR--NQSIRQISCGGR-----HTAFLTDSGRIFTCGKD 1033

Query: 358  DKGQLGIELVNNQTERGNPERVD 380
              GQLG ++  +Q +   P+R++
Sbjct: 1034 SFGQLG-QMSGDQNK---PKRIE 1052



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 25/240 (10%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P   +SL    I Q   G   T+ ++  G+VY++G   +G  + G+      +SP  V +
Sbjct: 847  PKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYG--QLGLGDVTQHSSPMQVSA 904

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            L+   V+Q A G+   AVL+    V  F  GN A +G               ++ ++P +
Sbjct: 905  LEKYNVLQIASGSTHCAVLTTSKEVLVF--GNGAAMG-------------AASVVSLPTL 949

Query: 158  QIAAGYCYLLALAC-QPSGMAVYSVG----CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
              +  Y ++  L C   S  A+   G     G G +LGHG  + E  P+LIE  +  +++
Sbjct: 950  VPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTETSPKLIEALRNQSIR 1009

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
               ++ G  H A +   GR+ T G   +G LG  + + ++ PK +++L     I V+ G+
Sbjct: 1010 Q--ISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD-QNKPKRIESLTKTTFISVSCGE 1066



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 37/288 (12%)

Query: 66   GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            G++  +G    G+  +G    ++   P++++SL + ++ Q   G   T  L++ G+VY++
Sbjct: 823  GELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880

Query: 126  SWGNDARLG-----HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
                  +LG      H+ P  V        LE   V+QIA+G  +   L      +    
Sbjct: 881  GASEYGQLGLGDVTQHSSPMQVS------ALEKYNVLQIASGSTHCAVLTTSKEVLVF-- 932

Query: 181  VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
               G G  +G  S      P L+   + L++  +    G +  A + + G V TWG G+ 
Sbjct: 933  ---GNGAAMGAASVV--SLPTLVPSLKYLHIDRL--CCGHYSTAAITECGDVYTWGTGQE 985

Query: 241  GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
              LGHG    E+ PK+++AL +     ++ G   T  +++ G +  F CG+  S G    
Sbjct: 986  --LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRI--FTCGKD-SFGQLGQ 1040

Query: 301  ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
              G  N+      P+ + SL     +   IS++    +N   F  T S
Sbjct: 1041 MSGDQNK------PKRIESLT----KTTFISVSCGENYNVALFDTTRS 1078



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 13/172 (7%)

Query: 35   NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            + +P+   +L+   ++Q A+G+    +++ + +V  FG  +       +    +V+ P L
Sbjct: 896  HSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA------AMGAASVVSLPTL 949

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            V SLK + + +   G++ TA ++  G VYT  WG    LGH     +  P  L+  L N 
Sbjct: 950  VPSLKYLHIDRLCCGHYSTAAITECGDVYT--WGTGQELGHGGNSTETSPK-LIEALRNQ 1006

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
             + QI+ G  +   L    SG  +++ G    G+LG  S  D+  P+ IE  
Sbjct: 1007 SIRQISCGGRHTAFLT--DSGR-IFTCGKDSFGQLGQMS-GDQNKPKRIESL 1054



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 14/136 (10%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    SL+ + I +   G   T  I++ G VY +G       E G  G    TSP+L+E+
Sbjct: 947  PTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ----ELGHGGNSTETSPKLIEA 1002

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARL-GHHTEPNDVEPHPLLGTLEN 153
            L+N  + Q + G   TA L+  GR++T    S+G   ++ G   +P  +E      +L  
Sbjct: 1003 LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPKRIE------SLTK 1056

Query: 154  IPVVQIAAGYCYLLAL 169
               + ++ G  Y +AL
Sbjct: 1057 TTFISVSCGENYNVAL 1072



 Score = 40.4 bits (93), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)

Query: 31   GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
            G     +P    +L+   I Q + G   T  ++D+G+++  GKDSFG+     Q +    
Sbjct: 990  GNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLG---QMSGDQN 1046

Query: 91   SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY--TFSW 127
             P+ +ESL     +  + G  +   L    R +   F W
Sbjct: 1047 KPKRIESLTKTTFISVSCGENYNVALFDTTRSFRDKFCW 1085


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 13/243 (5%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I   AAG   T+  S  G++YA+G +  G+  +     KL   PQ +  L++  + Q A 
Sbjct: 156 IADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVAC 215

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAGYCYLL 167
           G++ +  L+++G VYT+ +G   RLGH +  ++  P  +   + ENI    I AG+ Y  
Sbjct: 216 GSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENIS--SIHAGFEYSS 273

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A++   +   V+  G G    LG G + D+  P +++ F     Q   +A G++HAA V 
Sbjct: 274 AVS---TSGKVFVWGYGHFYVLGQGDKKDQLAPVVLD-FPTSIRQ---LAFGSFHAAAVS 326

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVK-AIHVATGDYTTFVVSEDGDV 284
             G + TWG   +G LGHG +    +  P V+ A   ++ +  VA G   T VV+  GDV
Sbjct: 327 HSGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDV 386

Query: 285 YSF 287
           +SF
Sbjct: 387 FSF 389



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 30/310 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I + A G   +M+++++G++   G +  G+   G     L  + +  E      +   A 
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLG----NLENASEFEEVKGTESIADVAA 161

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPND--VEPHPLLGTLENIPVVQIAAGYCYL 166
           G + T   S++G++Y +      +LGHH       VEP  +L  L + P+ Q+A G  + 
Sbjct: 162 GFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQVACGSYHS 220

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           +AL        VY+ G G  G+LGHGS  DE  P+ +E     N+    + AG  +++ V
Sbjct: 221 MALTKDGE---VYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISS--IHAGFEYSSAV 275

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G+V  WG+G +  LG G+++ +  P V+     ++ +  A G +    VS  G +++
Sbjct: 276 STSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTSIRQL--AFGSFHAAAVSHSGMLFT 333

Query: 287 FGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQV-NERVVQISLTNSIYWNAHTFA 344
           +G      LGH       G +  N +L P ++ +  Q+ N + V          + HT  
Sbjct: 334 WGHATHGPLGH-------GLKSPNIILEPTVLDAPAQLQNSKQVACG-------SQHTLV 379

Query: 345 LTESGKLYAF 354
           +T +G +++F
Sbjct: 380 VTGTGDVFSF 389



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDY 273
           VAAG WH     + G++  WG  ++G LGH +   +    P+ +  L D     VA G Y
Sbjct: 159 VAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSY 218

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  +++DG+VY++G G    LGH +  D    +    L  + ++S+    E    +S +
Sbjct: 219 HSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTS 278

Query: 334 NSIY-WNAHTFALTESGKLYAFGAGDK 359
             ++ W          G  Y  G GDK
Sbjct: 279 GKVFVWG--------YGHFYVLGQGDK 297


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 136/287 (47%), Gaps = 39/287 (13%)

Query: 92  PQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 148
           P+ +ES  N+  V   A G    A+ +R+G V+T  WG ++  RLGH  + +   P  L+
Sbjct: 189 PKALES--NVLDVCHIATGAHHIAIATRQGHVFT--WGQESGGRLGHGIDKDFSSP-VLV 243

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG--GKLGHGSRTDEKHPRLIEQF 206
             LE      +A G  +  AL+       +Y+ G G    G LGHGS      P+++   
Sbjct: 244 EFLEGNNFEFVACGEYHTSALS---KSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNG- 299

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L  LQ V +A G WH+A+   +G++ T+G G +G LGHG++E    PK VQ L  +K I
Sbjct: 300 PLEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTI 359

Query: 267 HVATGDYTTFVV----------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            VA G + T  +          S    ++++G G+   LGH       GN+    L P  
Sbjct: 360 KVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGH-------GNKET-YLQPTR 411

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V  L + N   V+         +  T ALT SG ++  G  + GQLG
Sbjct: 412 VAPLMEYNFHQVECG-------HNMTIALTTSGHVFTMGGTEHGQLG 451



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 32/295 (10%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G++++  A G   + L +  G+++ FG  +FG   +G Q +  V  P+ V+ L  +  
Sbjct: 301 LEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQES--VWYPKEVQLLTGLKT 358

Query: 104 VQAAIGNFFTAVL----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
           ++ A G + TA +          S   +++T+  G+  RLGH  +   ++P  +   +E 
Sbjct: 359 IKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLME- 417

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
               Q+  G+   +AL    +   V+++G    G+LG+      K P L+ Q +LL    
Sbjct: 418 YNFHQVECGHNMTIALT---TSGHVFTMGGTEHGQLGNPMSLG-KIPTLV-QDKLLGEFV 472

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-D 272
             ++ GA H A++     + TWG G  G LGHG+ E    P +V AL D    +V+ G +
Sbjct: 473 EKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSN 532

Query: 273 YTTFV-----VSE-DGDVY-----SFGCGESASLGHNA--IADGQGNRHANVLTP 314
           +T+ +     VSE D  +Y     +FG  +     HN       +    A  LTP
Sbjct: 533 FTSCICVHKWVSETDQSIYNGFRQAFGLTKKRHNCHNCGLACSSKKTLKATTLTP 587


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 42/353 (11%)

Query: 28   NLLGREVNG----TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            N LG+  NG    +P+  +++   R +  A+GA   + +S  G V++FG +S G+  Y  
Sbjct: 729  NSLGQLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGY-- 786

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPND 141
            +G+   TSP+ +   + I  V  A G  F+  LS +G V+  +WG++   +LG       
Sbjct: 787  EGSATQTSPRWLTGPECIEAV--AAGALFSLALSCDGGVW--AWGDNGSGQLGDGAVTAR 842

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P  + G      VV IAAG  + LA+    +   V++ G    G+LG G+ T    P 
Sbjct: 843  TAPARVPGLAH---VVAIAAGSDHALAVRADGT---VWAWGANGSGQLGDGTTTSRAVPM 896

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             +++     +  V VA G+ H+  V  DG V  WG    G LG G     ++P  V  L+
Sbjct: 897  QVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLS 952

Query: 262  DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             V+AI  A+G   +  ++E G V+++G   S  LG     DG          P  V+ L 
Sbjct: 953  GVQAI--ASGAQHSLALAEGGVVWAWGANGSGQLG-----DGTTTSRTR---PVQVSGLS 1002

Query: 322  QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
             V   V   S +          ALT  GK++++G    GQLG   +N++++ G
Sbjct: 1003 GVQGLVAGASFS---------LALTP-GKVWSWGNNSAGQLGDGTLNSRSQPG 1045



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 151/356 (42%), Gaps = 49/356 (13%)

Query: 27  RNLLGREVNGT----------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 76
           RN+ G+  NGT          P + R +QG      A+G   T  +   G V+A+G +S 
Sbjct: 678 RNVSGQLGNGTLVSESTPRRVPSFAR-VQGF-----ASGLRTTFALRADGTVWAWGDNSL 731

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
           G+   G        SP  V+++     V  A G      +S +G V++F   +  +LG+ 
Sbjct: 732 GQLGNGAT----SASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYE 787

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
                  P  L G  E I  V  AAG  + LAL+C      V++ G    G+LG G+ T 
Sbjct: 788 GSATQTSPRWLTGP-ECIEAV--AAGALFSLALSCD---GGVWAWGDNGSGQLGDGAVTA 841

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              P  +     +    V +AAG+ HA  V  DG V  WG    G LG G     +VP  
Sbjct: 842 RTAPARVPGLAHV----VAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQ 897

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V+ L DV  + VA G   +  V  DG V+++G   S  L       G G   +  L P  
Sbjct: 898 VKELVDV--VAVAGGSGHSLAVRADGTVWAWGANGSGQL-------GDGTTTSRTL-PVF 947

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           V++L  V                 H+ AL E G ++A+GA   GQLG     ++T 
Sbjct: 948 VSTLSGVQAIASGAQ---------HSLALAEGGVVWAWGANGSGQLGDGTTTSRTR 994



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 146/332 (43%), Gaps = 37/332 (11%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I   AAG   ++ +  +GQV+A+G + +G+   G   ++ V  P  V  L     +QA +
Sbjct: 553 ITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNV--PGRVSGLP--AGIQAIV 608

Query: 109 -GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G  ++  L  +G V+T+   ++ +LG  T      P P      ++P   +A       
Sbjct: 609 AGPSYSVALGADGSVWTWGENSNGQLGDGT--TTARPVP---ARVSLPATLVALSTRGSH 663

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            +A   +GM +++ G  + G+LG+G+   E  PR +  F  +       A+G      + 
Sbjct: 664 TVALDTTGM-LWAWGRNVSGQLGNGTLVSESTPRRVPSFARVQ----GFASGLRTTFALR 718

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            DG V  WG    G LG+G      VP  VQA+   + + +A+G      VS DG V+SF
Sbjct: 719 ADGTVWAWGDNSLGQLGNGATSASPVP--VQAVGYPRTVPLASGAQHVLAVSSDGSVFSF 776

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G      LG+           A   +P+ +T  + + E V   +L         + AL+ 
Sbjct: 777 GSNSRGQLGYEG--------SATQTSPRWLTGPECI-EAVAAGAL--------FSLALSC 819

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            G ++A+G    GQLG   V   T R  P RV
Sbjct: 820 DGGVWAWGDNGSGQLGDGAV---TARTAPARV 848



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 140/327 (42%), Gaps = 45/327 (13%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG   ++ +   G V+ +G +S+G+   G    +   +P +V  L    +   A G F 
Sbjct: 506 AAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-PRGPRAPAVVPGLA--VITHVAAGLFH 562

Query: 113 TAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLA 168
           +  L   G+V+  +WG++   +LG  +  +   P    G +  +P  +  I AG  Y +A
Sbjct: 563 SLALDSSGQVW--AWGDNVYGQLGDGSTTSRNVP----GRVSGLPAGIQAIVAGPSYSVA 616

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    S   V++ G    G+LG G+ T    P  +      +L   +VA     +  V  
Sbjct: 617 LGADGS---VWTWGENSNGQLGDGTTTARPVPARV------SLPATLVALSTRGSHTVAL 667

Query: 229 DGRVCTWGWGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           D     W WGR   G LG+G    ES P+ V +   V+    A+G  TTF +  DG V++
Sbjct: 668 DTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFARVQGF--ASGLRTTFALRADGTVWA 725

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFAL 345
           +G      LG+ A                  TS   V  + V    T  +   A H  A+
Sbjct: 726 WGDNSLGQLGNGA------------------TSASPVPVQAVGYPRTVPLASGAQHVLAV 767

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTE 372
           +  G +++FG+  +GQLG E    QT 
Sbjct: 768 SSDGSVFSFGSNSRGQLGYEGSATQTS 794



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 136/318 (42%), Gaps = 43/318 (13%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           S+QG R  + AAG   ++ ++ AG V+A+G ++ G+   G   T   ++P  V  L  + 
Sbjct: 45  SVQG-RPYRLAAGLNHSLYVTPAGTVWAWGANAQGQ--LGEGSTLQHSTPTQVVGLTGVT 101

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            V  A GN  +  L  EG V+T+    D +LG       V P  + G      V  IAAG
Sbjct: 102 AV--AAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSV-PAQVAGLTG---VTAIAAG 155

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + LAL       AV++ G    G+LG GS T    P  +        + V +AAG +H
Sbjct: 156 NLHSLALING----AVWAWGNNTTGQLGDGSSTSRSTPAKVAGLT----EVVAIAAGDFH 207

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-----HVATGDYTTFV 277
           +  + +DG V  WG    G LG G  +  S P  V  L  + A+     H      TT  
Sbjct: 208 SLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTL- 266

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
               G V+++G      LG+            + L P  V  L QV      ++L +   
Sbjct: 267 ---GGKVWAWGDNTYGQLGNGG--------DVSSLLPLEVPGLTQV------VALASG-- 307

Query: 338 WNAHTFALTESGKLYAFG 355
             +H+ AL     ++A+G
Sbjct: 308 -TSHSLALRGDDSVWAWG 324



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 41/331 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA-AIGNF 111
           AAG     L    G V+A+G +++G+   G     LV+ P  V     +  V+A +  ++
Sbjct: 405 AAGDHHVFLRQADGSVWAWGDNTYGQLGDGT----LVSRPAPVRLSSTLTSVRALSASSY 460

Query: 112 FTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
            +  L  +G V+  +WG++A  +LG  +      P  + G        +IAAG  + LAL
Sbjct: 461 HSLALRSDGTVW--AWGDNAYGQLGDTSGGRRPSPAQVPGVAG---ATEIAAGTYHSLAL 515

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
               +   V++ G    G+LG G+     + P ++    ++      VAAG +H+  +  
Sbjct: 516 RSDGT---VWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVITH----VAAGLFHSLALDS 568

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSF 287
            G+V  WG   YG LG G+    +VP  V  L   ++AI VA   Y +  +  DG V+++
Sbjct: 569 SGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAI-VAGPSY-SVALGADGSVWTW 626

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G   +  LG     DG         T + V +   +   +V +S   S     HT AL  
Sbjct: 627 GENSNGQLG-----DG-------TTTARPVPARVSLPATLVALSTRGS-----HTVALDT 669

Query: 348 SGKLYAFGAGDKGQLGI-ELVNNQTERGNPE 377
           +G L+A+G    GQLG   LV+  T R  P 
Sbjct: 670 TGMLWAWGRNVSGQLGNGTLVSESTPRRVPS 700



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 18/276 (6%)

Query: 26   KRNLLGREVNGTPLYCRSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
             R  LG E + T    R L G   I+A AAGA  ++ +S  G V+A+G +  G  + G  
Sbjct: 780  SRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDN--GSGQLGDG 837

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
                 T+P  V  L ++  +  A G+     +  +G V+ +      +LG  T  +   P
Sbjct: 838  AVTARTAPARVPGLAHVVAI--AAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVP 895

Query: 145  HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
               +   E + VV +A G  + LA+    +   V++ G    G+LG G+ T    P  + 
Sbjct: 896  ---MQVKELVDVVAVAGGSGHSLAVRADGT---VWAWGANGSGQLGDGTTTSRTLPVFVS 949

Query: 205  QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
                +      +A+GA H+  + + G V  WG    G LG G     + P  V  L+ V+
Sbjct: 950  TLSGVQ----AIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQ 1005

Query: 265  AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
             + VA   ++  +    G V+S+G   +  LG   +
Sbjct: 1006 GL-VAGASFSLALT--PGKVWSWGNNSAGQLGDGTL 1038



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 33/224 (14%)

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 216
           ++AAG  +  +L   P+G  V++ G    G+LG GS      P      Q++ L  V  V
Sbjct: 52  RLAAGLNH--SLYVTPAGT-VWAWGANAQGQLGEGSTLQHSTPT-----QVVGLTGVTAV 103

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  + ++G V TWG    G LG G  +  SVP  V  L  V AI  A G+  + 
Sbjct: 104 AAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQ-RSVPAQVAGLTGVTAI--AAGNLHSL 160

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +  +G V+++G   +  LG     DG     +   TP  V  L +V      +++    
Sbjct: 161 AL-INGAVWAWGNNTTGQLG-----DGSSTSRS---TPAKVAGLTEV------VAIAAGD 205

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           +   H+ AL   G ++A+G    GQLG   +++   R  P RV 
Sbjct: 206 F---HSLALKRDGTVWAWGGNYSGQLGDGTLDS---RSTPVRVS 243



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISD---AGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           TP+    L GI  +  A G   ++  S     G+V+A+G +++G+   G   + L+  P 
Sbjct: 238 TPVRVSGLTGI--VALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSLL--PL 293

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            V  L  +     A+ +  +  L+  G    ++WG++A+         V+  P+      
Sbjct: 294 EVPGLTQVV----ALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQRVPVR----- 344

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCG----LG------GKLGHGSRTDEKHPRLI 203
                  +G     ALAC   G A   VG G    LG      G+LG+GS +    P  +
Sbjct: 345 ------VSGVSDAQALAC---GNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRV 395

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALND 262
                       +AAG  H  +   DG V  WG   YG LG G       P ++   L  
Sbjct: 396 PSLT----AGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTS 451

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           V+A+  ++  Y +  +  DG V+++G      LG     D  G R     +P  V  +  
Sbjct: 452 VRALSASS--YHSLALRSDGTVWAWGDNAYGQLG-----DTSGGRRP---SPAQVPGVAG 501

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             E      +    Y   H+ AL   G ++ +G    GQLG
Sbjct: 502 ATE------IAAGTY---HSLALRSDGTVWTWGDNSYGQLG 533



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 17/241 (7%)

Query: 49   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
            ++  AAG+   + +   G V+A+G +  G+   G   ++ V  P  V+ L ++  V    
Sbjct: 854  VVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAV--PMQVKELVDVVAVAGGS 911

Query: 109  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
            G+     +  +G V+ +      +LG  T  +   P   + TL  +    IA+G  + LA
Sbjct: 912  GHSL--AVRADGTVWAWGANGSGQLGDGTTTSRTLPV-FVSTLSGVQA--IASGAQHSLA 966

Query: 169  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            LA    G  V++ G    G+LG G+ T    P  ++   L  +Q +V  A     ++   
Sbjct: 967  LA---EGGVVWAWGANGSGQLGDGTTTSRTRP--VQVSGLSGVQGLVAGA---SFSLALT 1018

Query: 229  DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
             G+V +WG    G LG G     S P     L+   A+  + G   T V+  D    S+G
Sbjct: 1019 PGKVWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSFVAL--SAGAQHTVVLRSDDSFLSWG 1076

Query: 289  C 289
             
Sbjct: 1077 T 1077



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 19/200 (9%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P+  + L  + ++  A G+G ++ +   G V+A+G +  G+   G   ++  T P  V +
Sbjct: 895  PMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR--TLPVFVST 950

Query: 98   LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            L  +  +  A G   +  L+  G V+ +      +LG  T  +   P  + G    +  V
Sbjct: 951  LSGVQAI--ASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG----LSGV 1004

Query: 158  Q-IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            Q + AG  + LAL        V+S G    G+LG G+      P             V +
Sbjct: 1005 QGLVAGASFSLALTPGK----VWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSF----VAL 1056

Query: 217  AAGAWHAAVVGQDGRVCTWG 236
            +AGA H  V+  D    +WG
Sbjct: 1057 SAGAQHTVVLRSDDSFLSWG 1076


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 149/328 (45%), Gaps = 33/328 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+L G+ +   A G   T  + D+G VY +G +  G+  +  + ++ V  P  V  
Sbjct: 28  PRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE-VGLPGEVAM 86

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
            + +  + A  G + T  +   G V++F      +LG   +   V    L+ +L++  VV
Sbjct: 87  PERVVALSA--GYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVV 144

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--------PRLIEQFQLL 209
            +AAG  + LAL    +G  VYS G    G+LGHGS T  +         PRL+  F+ L
Sbjct: 145 AVAAGMEHSLALT---AGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEAL 201

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            ++ V  +AG  H+A V   G    WG+G++  LG G++E  + P V+  L    A  VA
Sbjct: 202 RVEQV--SAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGSTAA-VA 258

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   +  +   G V ++G  ++  LG           H     P+  + +  V+   + 
Sbjct: 259 CGSLHSLALQYGGHVLAWGTNQNGVLGQG---------HEKQQQPKRPSKVPGVSAEQIA 309

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAG 357
                   W  H+ A+T SGKLY +G G
Sbjct: 310 AG------WK-HSAAVTGSGKLYTWGWG 330



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 20/186 (10%)

Query: 180 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + G G  G+LGH      E+ PR++    LL +    VA G  H A V   G V TWG  
Sbjct: 7   TFGNGDCGRLGHSLEYASEELPRVVRA--LLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64

Query: 239 RYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             G LGH +E+ E  +P  V     V A+  + G Y T  V E G V+SFGC     L  
Sbjct: 65  DKGQLGHDSEDSEVGLPGEVAMPERVVAL--SAGYYHTLCVGESGSVWSFGCNGKGQL-- 120

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                G G     V  P+LV SL+  + +VV ++         H+ ALT  G++Y++G  
Sbjct: 121 -----GLGKDVVLVREPRLVKSLQ--DNKVVAVAAGME-----HSLALTAGGEVYSWGNA 168

Query: 358 DKGQLG 363
             G+LG
Sbjct: 169 ANGRLG 174



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 16/243 (6%)

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           TF  G+  RLGH  E    E   ++  L  +P+  +A G  +  A+    SG  VY+ G 
Sbjct: 7   TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAV--DDSGT-VYTWGL 63

Query: 184 GLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
              G+LGH S   E   P  +   + +    V ++AG +H   VG+ G V ++G    G 
Sbjct: 64  NDKGQLGHDSEDSEVGLPGEVAMPERV----VALSAGYYHTLCVGESGSVWSFGCNGKGQ 119

Query: 243 LGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           LG G +      P++V++L D K + VA G   +  ++  G+VYS+G   +  LGH +  
Sbjct: 120 LGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT 179

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
             +    +    P+LV + + +  RV Q+S         H+ A++ +G  + +G G   Q
Sbjct: 180 PRRLFGSSIEFLPRLVRAFEAL--RVEQVSAG-----QMHSAAVSTAGDAFLWGYGKFHQ 232

Query: 362 LGI 364
           LG 
Sbjct: 233 LGF 235



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 17/134 (12%)

Query: 232 VCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           + T+G G  G LGH  E   E +P+VV+AL  V    VA G   T  V + G VY++G  
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
           +   LGH++  D +      V  P          ERVV  +L+   Y   HT  + ESG 
Sbjct: 65  DKGQLGHDS-EDSEVGLPGEVAMP----------ERVV--ALSAGYY---HTLCVGESGS 108

Query: 351 LYAFGAGDKGQLGI 364
           +++FG   KGQLG+
Sbjct: 109 VWSFGCNGKGQLGL 122



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 27  RNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
           R L G  +   P   R+ + +R+ Q +AG   +  +S AG  + +G   F +  +G    
Sbjct: 181 RRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSD-- 238

Query: 87  KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
           + +  P ++  LK       A G+  +  L   G V  +    +  LG   E       P
Sbjct: 239 EDLAGPTVLPPLKGS-TAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRP 297

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQ----------PSGMAVYSVG-CGLGGKLGHGSRT 195
               +  +   QIAAG+ +  A+               G A+   G  G GG+LGHG+  
Sbjct: 298 --SKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDF 355

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           D   P  ++   L      +VA G  H A +
Sbjct: 356 DYWSPHHVDWLSLTETD--LVACGMNHTAAI 384


>gi|301625970|ref|XP_002942173.1| PREDICTED: protein RCC2 homolog [Xenopus (Silurana) tropicalis]
          Length = 456

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 32/300 (10%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + A   A  ++LI+  G+++++G
Sbjct: 108 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLTGVQVRTVAAGPCAAHSLLITVEGKLWSWG 166

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G    K +  P+L+ESLK    V  A G   T  L+  G VY F      +
Sbjct: 167 RNDKGQLGHG--DVKRIDVPKLIESLKGEVFVHGACGRNHTLALTENGSVYAFGENKMGQ 224

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 225 LGLGNK-TDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 280

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E   R I  F       Q+L +  VVV   A G  H+ V+    
Sbjct: 281 SDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQVLPVPNVVVRDIACGINHSLVLDSQK 340

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           RV +WG+G YG LGH  +  E VP++V+  +     A  +  G   +F VSE G ++ +G
Sbjct: 341 RVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGASQIYAGATCSFAVSEMGGLFFWG 400



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  +AAG C   +L     G  ++S G    G+LGHG       P+LI
Sbjct: 130 PH-RYGCLTGVQVRTVAAGPCAAHSLLITVEG-KLWSWGRNDKGQLGHGDVKRIDVPKLI 187

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E  +      V  A G  H   + ++G V  +G  + G LG GN+  ++VP   Q L + 
Sbjct: 188 ESLKGEVF--VHGACGRNHTLALTENGSVYAFGENKMGQLGLGNKT-DAVPSPAQILYNG 244

Query: 264 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
           + I  VA G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L  + + 
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304

Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
              +  +    + + N +  +      H+  L    +++++G G  G+LG
Sbjct: 305 IFIEKTKDGQVLPVPNVVVRDIACGINHSLVLDSQKRVFSWGFGGYGRLG 354



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 47/268 (17%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           +++ EG+++++   +  +LGH  +   ++   L+ +L+    V  A G  + LAL    S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDVKRIDVPKLIESLKGEVFVHGACGRNHTLALTENGS 213

Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
              VY+ G    G+LG G++TD    P  I    L N QP+  VA GA  + ++   G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266

Query: 233 CTWGWGRYGCLGHGNE------------ECESVPK----VVQALNDVKAIHV-------- 268
            ++G   YG LGH ++            +CE + +     ++   D + + V        
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQVLPVPNVVVRDI 326

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   + V+     V+S+G G    LGH+   D         + P+LV           
Sbjct: 327 ACGINHSLVLDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAS 378

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
           QI    +      +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 34/132 (25%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 292
           WG  RYGCL                   V+   VA G     + +++ +G ++S+G  + 
Sbjct: 128 WGPHRYGCL-----------------TGVQVRTVAAGPCAAHSLLITVEGKLWSWGRNDK 170

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH  +          +  P+L+ SLK   E  V  +   +     HT ALTE+G +Y
Sbjct: 171 GQLGHGDVK--------RIDVPKLIESLK--GEVFVHGACGRN-----HTLALTENGSVY 215

Query: 353 AFGAGDKGQLGI 364
           AFG    GQLG+
Sbjct: 216 AFGENKMGQLGL 227


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 55/363 (15%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L G+RI+ +A G   ++ +++ G VY+FG+    E + G         P ++ +
Sbjct: 25  PSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR--EGQLGHPEKYNTAHPNVITA 82

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLEN 153
           L +  + + A GNF +  L+  G++Y   WG    +    +    P+ +     +G    
Sbjct: 83  LAHERITRVACGNFHSLALTDTGKIY--EWGQLHEIDKSAKGLEAPSGLIEMKGIGFASR 140

Query: 154 IPVVQIAAGYCYLLALACQPSGMAV----------------------YSVGCGLGGKLGH 191
           I   Q  + Y      A  P+   +                      +    G GG    
Sbjct: 141 I-AEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQ 199

Query: 192 GSRTDEKHPRLIEQFQLL--------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
             +  +   +++++ QL         N Q V ++AG  ++A V + G+V TWG+   G L
Sbjct: 200 NEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQL 259

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           G G+     +P+ V+   +V  + V+ G     V+S+ GD++++G G    LGH  +   
Sbjct: 260 GLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKL--- 316

Query: 304 QGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                 + L P+ V +     Q+N++V Q++   +      T ALT  G+L++FG G+ G
Sbjct: 317 -----KSCLHPKKVLAFSEADQLNQKVRQVACGANF-----TMALTVDGRLWSFGHGEYG 366

Query: 361 QLG 363
           QLG
Sbjct: 367 QLG 369



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 47/259 (18%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPH 145
           +P LV S+KN  VV  + G  ++A +++ G+V+T+ +    +LG      H  P  V+  
Sbjct: 217 TPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVK-- 274

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
                  N+ +V ++ G  ++  ++ Q     +++ G G+ G+LGHG      HP+ +  
Sbjct: 275 ----FFTNVHIVSVSCGRQHIGVISDQGD---LFTWGLGVFGQLGHGKLKSCLHPKKVLA 327

Query: 206 F---QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE----------- 251
           F     LN +   VA GA     +  DGR+ ++G G YG LG   EE +           
Sbjct: 328 FSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLG-ATEENQYRDWNRGGNGN 386

Query: 252 ----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
                     +VP+ V+AL  VK   V  G   T VV+ED DVYS+G G S  LG     
Sbjct: 387 GNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGF---- 442

Query: 302 DGQGNRHANVLTPQLVTSL 320
              G+R    L PQ V +L
Sbjct: 443 ---GDRKFQ-LVPQRVPAL 457



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 35/297 (11%)

Query: 18  DIINERNGKR--NLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 75
           D  NE+ GK    ++ R V  TPL   S++  +++  +AG   +  ++ +G+V+ +G + 
Sbjct: 197 DSQNEQKGKHIGKIVDR-VQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNE 255

Query: 76  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
            G+   G+        PQ V+   N+ +V  + G     V+S +G ++T+  G   +LGH
Sbjct: 256 KGQ--LGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGH 313

Query: 136 HTEPNDVEPHPLLGTLE----NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
               + + P  +L   E    N  V Q+A G  + +AL        ++S G G  G+LG 
Sbjct: 314 GKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGR---LWSFGHGEYGQLGA 370

Query: 192 GSRTDEKH--------------------PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
                 +                     P+ +E   L +++   V  G  H  VV +D  
Sbjct: 371 TEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEA--LASVKVKQVTCGHLHTIVVTEDND 428

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSF 287
           V +WGWG  GCLG G+ + + VP+ V AL+      ++ G+  + VV S D   ++F
Sbjct: 429 VYSWGWGASGCLGFGDRKFQLVPQRVPALSGEIVSSISAGEKHSLVVRSTDTTTFAF 485



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 113/241 (46%), Gaps = 30/241 (12%)

Query: 142 VEPHPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           V+  PLL G+++N  VV ++AG+ Y  + A   SG  V++ G    G+LG G R     P
Sbjct: 214 VQLTPLLVGSIKNQQVVDMSAGWAY--SAAVTKSG-KVFTWGFNEKGQLGLGDRWFHGLP 270

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           + ++ F   N+  V V+ G  H  V+   G + TWG G +G LGHG  +    PK V A 
Sbjct: 271 QQVKFFT--NVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAF 328

Query: 261 NDV-----KAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---HNAIAD---------G 303
           ++      K   VA G   T  ++ DG ++SFG GE   LG    N   D          
Sbjct: 329 SEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGN 388

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +   H     PQ V +L  V  +V Q++  +      HT  +TE   +Y++G G  G LG
Sbjct: 389 EREAHLQYAVPQQVEALASV--KVKQVTCGH-----LHTIVVTEDNDVYSWGWGASGCLG 441

Query: 364 I 364
            
Sbjct: 442 F 442



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G  +   LGH  E+    P V+Q L+ ++ +  A G+  +  V+E GDVYSFG G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH            N   P ++T+L   +ER+ +++       N H+ ALT++GK+
Sbjct: 63  EGQLGH--------PEKYNTAHPNVITAL--AHERITRVACG-----NFHSLALTDTGKI 107

Query: 352 YAFG---AGDKGQLGIE 365
           Y +G     DK   G+E
Sbjct: 108 YEWGQLHEIDKSAKGLE 124



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           M+V S G     +LGH    D   P +I+   L  ++ V+ A G  H+  V + G V ++
Sbjct: 1   MSVISFGVNKQSQLGHALEKDHLDPSVIQN--LSGMRIVMSACGEAHSLAVTEFGDVYSF 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           G GR G LGH  +   + P V+ AL   +   VA G++ +  +++ G +Y +G
Sbjct: 59  GRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWG 111



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V +FG +   +  + ++   L   P ++++L  + +V +A G   +  ++  G VY+F  
Sbjct: 3   VISFGVNKQSQLGHALEKDHL--DPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGR 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           G + +LGH  + N   P+ ++  L +  + ++A G  + LAL
Sbjct: 61  GREGQLGHPEKYNTAHPN-VITALAHERITRVACGNFHSLAL 101


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 15/292 (5%)

Query: 19  IINERNGKRNLLGREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           I  + +G R   G+E     P    +L  IR    A G   ++ +S  GQV+ +G   FG
Sbjct: 113 IWGKGDGGRLGFGQEYPAFLPTLNPNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFG 170

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----- 132
              + V   +L+  P++VE   N  +   A     TA ++  G +YT  WG D       
Sbjct: 171 ALGHSVYHRELL--PRMVEGSWNAKIRHIATAGTHTAAITESGELYT--WGRDQGDGRLG 226

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG +  PN+     +   ++ +PV   A        +     G  +++ G     +LG G
Sbjct: 227 LGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQ-LWNWGANSNYELGRG 285

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
            +     P+ I   Q  +++ + +A+G +H+  +  DG+V +WG+G++G LGH + E + 
Sbjct: 286 DKVGGWKPQPIPSLQ--DVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQK 343

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           +P V++AL D   I++A G  ++  ++++G +Y +G  + + LG   + + Q
Sbjct: 344 IPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQ 395



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 28/324 (8%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
            G+  +  + G   + L+ D G+++ +GK   G   +G +    +  P L  +L +I   
Sbjct: 89  SGLTEVGISCGLFHSSLVVD-GKLWIWGKGDGGRLGFGQEYPAFL--PTLNPNLDSI--R 143

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
             A+G   +  LS  G+V+T+ +G    LGH     ++ P  + G+  N  +  IA    
Sbjct: 144 STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSW-NAKIRHIATAGT 202

Query: 165 YLLALACQPSGMAVYSVGCGLG-GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA---GA 220
           +  A+    SG  +Y+ G   G G+LG G          +     +   PV VAA   G 
Sbjct: 203 HTAAIT--ESG-ELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGG 259

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +   V+ Q+G++  WG      LG G++     P+ + +L DV+ I +A+G Y +  +++
Sbjct: 260 FFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTD 319

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DG V S+G G+   LGH++I         N   P ++ +L   +E V+ I+   S     
Sbjct: 320 DGKVLSWGYGQHGQLGHSSIE--------NQKIPTVIEAL--ADEHVIYIACGGS----- 364

Query: 341 HTFALTESGKLYAFGAGDKGQLGI 364
            + A+T++GKLY +G     QLG+
Sbjct: 365 SSAAITDNGKLYMWGNAKDSQLGV 388



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 57/334 (17%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF------------VVQAAIG----- 109
           Q+ ++G+ + G+   G++  +L  SP     L   F             V+ A G     
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 110 ---NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP--HPLLGTLENIPVVQIAAGYC 164
                F + L  +G+++ +  G+  RLG   E     P  +P L ++ +      A G  
Sbjct: 96  ISCGLFHSSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRST-----ALGGV 150

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           + +AL+   S   V++ G G  G LGH     E  PR++E      ++ +  A    H A
Sbjct: 151 HSVALS---SLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGT--HTA 205

Query: 225 VVGQDGRVCTWGW----GRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATGDYTTF 276
            + + G + TWG     GR G LG      E    S+P  V+AL  V    V+ G + T 
Sbjct: 206 AITESGELYTWGRDQGDGRLG-LGPNCGPNEGGGLSIPSKVKAL-PVPVAAVSCGGFFTM 263

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V++++G ++++G   +  LG      G          PQ + SL+ V  R++QI+     
Sbjct: 264 VLTQEGQLWNWGANSNYELGRGDKVGGW--------KPQPIPSLQDV--RIIQIASGGY- 312

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
               H+ ALT+ GK+ ++G G  GQLG   + NQ
Sbjct: 313 ----HSLALTDDGKVLSWGYGQHGQLGHSSIENQ 342



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 31  GREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKL 88
           G +V G  P    SLQ +RIIQ A+G   ++ ++D G+V ++G    G+  +  ++  K+
Sbjct: 285 GDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKI 344

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              P ++E+L +  V+  A G   +A ++  G++Y +    D++LG    P + +P P+
Sbjct: 345 ---PTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLP-ETQPLPV 399


>gi|119578069|gb|EAW57665.1| hCG2006901, isoform CRA_b [Homo sapiens]
          Length = 620

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 22/201 (10%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P   E L N+ V Q A       +LSR GRVYT ++ +D           + P  L+
Sbjct: 344 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 392

Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             L +  +V+IAA   G+ YL ALA   +   VYS GCG GG+LGHG     + P++I  
Sbjct: 393 QGLASRNIVKIAAHSDGHHYL-ALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 448

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           F  +      V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +
Sbjct: 449 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 508

Query: 264 KAIHVA--TGDYTTFVVSEDG 282
           K I VA  +GD  T  V+E+G
Sbjct: 509 KVIDVACGSGDAQTLAVTENG 529



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 56/261 (21%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
           P+ C  L  + + Q A    R +++S  G+VY  A+  D+               +PQLV
Sbjct: 347 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 392

Query: 96  ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
           + L  +NI  + A         L+  G VY++  G+  RLGH       EP       G 
Sbjct: 393 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 452

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L 
Sbjct: 453 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 509

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  V   +G      V ++G+                                K I VA 
Sbjct: 510 VIDVACGSGDAQTLAVTENGK--------------------------------KVIDVAA 537

Query: 271 GDYTTFVVSEDGDVYSFGCGE 291
           G      ++ED +V+S+G  +
Sbjct: 538 GSTHCLALTEDSEVHSWGSND 558



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 17/160 (10%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           +D   P+L++     N+  +   +   H   +   G V +WG G  G LGHG+      P
Sbjct: 384 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 443

Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           KV+ A +  +A    +H+A G   +  ++ +G++Y++G G    LGH +  D        
Sbjct: 444 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 497

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
              P LV  LK +  +V+ ++  +    +A T A+TE+GK
Sbjct: 498 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGK 530



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ L     + +A  +  +    ++  G+VYS+GCG+   LGH      +       
Sbjct: 389 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE------- 441

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             P+++++   KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG
Sbjct: 442 -EPKVISAFSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLG 489


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 36/316 (11%)

Query: 59  TMLISDAGQ--VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
           T+   D G+  V++ G++S+GE  +G   ++   S + +++L+   ++Q   GN  T VL
Sbjct: 364 TIFHEDEGEREVWSCGQNSYGELGHGDTASR--KSFERIQALQQKEIIQIGAGNEHTVVL 421

Query: 117 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM 176
           + +G+V+T  + ++ + G             +  L  IP +   +   +     C+ + +
Sbjct: 422 TADGKVFTCGYNDNGQCGQGGTAR-------VSHLSEIPKMDSGSSQAHAYN-GCEHTIL 473

Query: 177 A-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG- 230
                 V + G    G+LGHG+ T E  P++I   +  N    +V+   +H  +  +DG 
Sbjct: 474 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGN 531

Query: 231 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
              + T+G   YG LGH +     +P+ V+AL+D + + VA G Y T VV+  G  ++FG
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFG 591

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
             +   LG + +         N L P     ++   ER   + +    Y   HT AL   
Sbjct: 592 KNDYGQLGIDTM--------ENQLAP---VQVRGGLERQECLEIRCGYY---HTIALCSG 637

Query: 349 GKLYAFGAGDKGQLGI 364
             L+AFG  D GQLG+
Sbjct: 638 AHLFAFGRNDYGQLGL 653



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 163/347 (46%), Gaps = 25/347 (7%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN- 100
           ++LQ   IIQ  AG   T++++  G+V+  G +  G+   G  GT  V+    +  + + 
Sbjct: 401 QALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQG--GTARVSHLSEIPKMDSG 458

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
                A  G   T ++S +GRV T  +    +LGH    ++  P  ++ +LEN  V  ++
Sbjct: 459 SSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPK-IIRSLENKIVRLVS 517

Query: 161 AGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             Y Y   LAC+   +  +Y+ G    G+LGH    D K P+ +E   L + Q V VA G
Sbjct: 518 CSY-YHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEA--LSDQQIVSVACG 574

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVV 278
            +H  VV   G+   +G   YG LG    E +  P  V+  L   + + +  G Y T  +
Sbjct: 575 QYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL 634

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNE----RVVQISLT 333
                +++FG  +   LG   +     +  +N+ L  Q  ++ + ++E     +V+I+  
Sbjct: 635 CSGAHLFAFGRNDYGQLG---LGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIAC- 690

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
              Y   HT A++++G +Y FG  + GQLG     + TER  P  +D
Sbjct: 691 -GCY---HTIAVSDNGVMYVFGRNNHGQLG---TGDTTERVYPFPID 730



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 29/282 (10%)

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           A + N  T     EG    +S G ++   LGH  +    +    +  L+   ++QI AG 
Sbjct: 357 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGH-GDTASRKSFERIQALQQKEIIQIGAGN 415

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + + L    +   V++ G    G+ G G      H   I +    + Q      G  H 
Sbjct: 416 EHTVVLT---ADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN-GCEHT 471

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG- 282
            +V  DGRV T G+   G LGHGN   ESVPK++++L +     V+   Y T +  EDG 
Sbjct: 472 ILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGN 531

Query: 283 --DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
             ++Y+FG  +   LGHN   D +         PQ V +L   ++++V ++         
Sbjct: 532 LQNLYTFGRNDYGQLGHNDSIDRK--------IPQFVEALS--DQQIVSVACG-----QY 576

Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTE----RGNPER 378
           HT  +T SGK +AFG  D GQLGI+ + NQ      RG  ER
Sbjct: 577 HTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLER 618



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQV---YAFGKDSFGEAEYGVQGTKLVTSP 92
             P   RSL+   +   +     T+L  + G +   Y FG++ +G+  +     + +  P
Sbjct: 500 SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--P 557

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           Q VE+L +  +V  A G + T V++  G+ + F   +  +LG  T  N + P  + G LE
Sbjct: 558 QFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLE 617

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG----SRTDE--------KHP 200
               ++I  GY + +AL    SG  +++ G    G+LG G    S T           + 
Sbjct: 618 RQECLEIRCGYYHTIALC---SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNA 674

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           RLI++ +  ++  V +A G +H   V  +G +  +G   +G LG G+      P  +   
Sbjct: 675 RLIDELEGKDI--VRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDF 732

Query: 261 NDVKAIHVATGDYTTFVVS 279
              +   VA G Y T V++
Sbjct: 733 VGKRIALVAAGFYHTVVLT 751


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 137/266 (51%), Gaps = 24/266 (9%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
           ++++S+  +V+ +G +S  +   G Q   L+  P++  S      ++A  G + T V+S 
Sbjct: 368 SLVVSENSEVFVWGSNSSHQLAEGSQEKILL--PKMAISFAESQQIEA--GQYCTFVISS 423

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC---YLLALACQPSG 175
           +G V     G+  RLG     N  +   L    +N  + +I++      + LAL  +   
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKL--NFDNSIITRISSSKGSDGHTLALTSEGQ- 480

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             V+S G G  GKLGHG+   +K+P++I    L+    V ++AG  H+A V  DG++ TW
Sbjct: 481 --VFSWGDGDYGKLGHGNTLTQKYPKVILGV-LMGKVVVCISAGYRHSACVTDDGQLYTW 537

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS 294
           G G YG LGHG+    +VP +V+ +++V    V  G   T  VS+D   V+SFG G++  
Sbjct: 538 GEGDYGRLGHGDSNSRNVPTLVKDVSNVG--KVVCGSSHTIAVSQDSRTVWSFGGGDNGK 595

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSL 320
           LGH     G  NR   +  P+++ SL
Sbjct: 596 LGH-----GDTNR---IYKPKIIESL 613



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 8/235 (3%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q  AG   T +IS  G V A GK S+G    G    +        ++     +  +   +
Sbjct: 410 QIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSD 469

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             T  L+ EG+V+++  G+  +LGH        P  +LG L    VV I+AGY +    A
Sbjct: 470 GHTLALTSEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHS---A 526

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
           C      +Y+ G G  G+LGHG       P L++     N+  VV   G+ H   V QD 
Sbjct: 527 CVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVS--NVGKVV--CGSSHTIAVSQDS 582

Query: 231 R-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           R V ++G G  G LGHG+      PK++++L  +    V  G  ++  ++  G V
Sbjct: 583 RTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 41/250 (16%)

Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAG-YCYLLALACQPSGMAVYSV 181
           F WG+++  +L   ++   + P   +   E+    QI AG YC  +      S  +V + 
Sbjct: 378 FVWGSNSSHQLAEGSQEKILLPKMAISFAES---QQIEAGQYCTFVI----SSDGSVRAC 430

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA------AGAWHAAVVGQDGRVCTW 235
           G G  G+LG G   ++       Q + LN    ++           H   +  +G+V +W
Sbjct: 431 GKGSYGRLGLGDSNNQT------QLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSW 484

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESAS 294
           G G YG LGHGN   +  PKV+  +   K +   +  Y  +  V++DG +Y++G G+   
Sbjct: 485 GDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGR 544

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYA 353
           LGH     G  N   NV  P LV  +  V + V           ++HT A+++  + +++
Sbjct: 545 LGH-----GDSNSR-NV--PTLVKDVSNVGKVVCG---------SSHTIAVSQDSRTVWS 587

Query: 354 FGAGDKGQLG 363
           FG GD G+LG
Sbjct: 588 FGGGDNGKLG 597



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 17/143 (11%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           ++ VV ++  V  WG      L  G++E   +PK+  A++  ++  +  G Y TFV+S D
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSD 424

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-ERVVQISLTNSIYWNA 340
           G V + G G    LG      G  N           T LK++N +  +   +++S   + 
Sbjct: 425 GSVRACGKGSYGRLGL-----GDSNNQ---------TQLKKLNFDNSIITRISSSKGSDG 470

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           HT ALT  G+++++G GD G+LG
Sbjct: 471 HTLALTSEGQVFSWGDGDYGKLG 493



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 106
           RI  +    G T+ ++  GQV+++G   +G+  +G   T+    P+++   L    VV  
Sbjct: 461 RISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQ--KYPKVILGVLMGKVVVCI 518

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           + G   +A ++ +G++YT+  G+  RLG H + N      L+  + N+  V   + +   
Sbjct: 519 SAGYRHSACVTDDGQLYTWGEGDYGRLG-HGDSNSRNVPTLVKDVSNVGKVVCGSSH--- 574

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             +A       V+S G G  GKLGHG       P++IE    L ++ V
Sbjct: 575 -TIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKV 621



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 26/191 (13%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+  G     +L  GS+     P++   F     +   + AG +   V+  DG V   G 
Sbjct: 377 VFVWGSNSSHQLAEGSQEKILLPKMAISFA----ESQQIEAGQYCTFVISSDGSVRACGK 432

Query: 238 GRYGCLGHGNEECESVPKVVQALNDV-KAIHVATG-DYTTFVVSEDGDVYSFGCGESASL 295
           G YG LG G+   ++  K +   N +   I  + G D  T  ++ +G V+S+G G+   L
Sbjct: 433 GSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKL 492

Query: 296 GHNAIADGQGNRHANVLT---PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
           GH            N LT   P+++  +  + + VV IS         H+  +T+ G+LY
Sbjct: 493 GH-----------GNTLTQKYPKVILGV-LMGKVVVCISAGYR-----HSACVTDDGQLY 535

Query: 353 AFGAGDKGQLG 363
            +G GD G+LG
Sbjct: 536 TWGEGDYGRLG 546



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G  ++  +AG   +  ++D GQ+Y +G+  +G   +G   ++ V  P LV+ + N+  
Sbjct: 510 LMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNV--PTLVKDVSNVGK 567

Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V    G+  T  +S++ R V++F  G++ +LG H + N +    ++ +L  + + ++  G
Sbjct: 568 V--VCGSSHTIAVSQDSRTVWSFGGGDNGKLG-HGDTNRIYKPKIIESLIGLFIKKVGCG 624

Query: 163 YCYLLAL 169
               LAL
Sbjct: 625 SQSSLAL 631


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 2528 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 2585

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 2586 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 2644

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ I+    + ++ V  A G
Sbjct: 2645 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 2700

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  +    VA G   T  ++
Sbjct: 2701 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA 2760

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             +GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 2761 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 2811

Query: 339  NA 340
             A
Sbjct: 2812 TA 2813



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2502 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2562 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2619

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 2620 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2666

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P+++D+
Sbjct: 2667 GDYGKLGL---GNSTAKSSPQKIDV 2688



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2541

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2542 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2599

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
              A   S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 2600 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2655

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ +  L  +    VA G   +  +++DG VY+
Sbjct: 2656 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 2715

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  +    V +          HT AL 
Sbjct: 2716 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGMIIEDVAVG-------AEHTLALA 2760

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 2761 SNGDVYAWGSNSEGQLGLGHTNHVRE 2786



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 2578 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 2635

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   T  +S +G  V+ F  G+  +LG         P   +  L  I +
Sbjct: 2636 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 2694

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             ++A G  + +AL        VY+ G      L  G   +   P+ I     + ++ V V
Sbjct: 2695 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAV 2751

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              GA H   +  +G V  WG    G LG G+      P +V  L       ++ G
Sbjct: 2752 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 2804



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 2670 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 2729

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 2730 RNH--NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 2782

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   V QI+AG C+  A    P
Sbjct: 2783 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 2815


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43   SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 1686 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 1743

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P   +  LE   + Q+
Sbjct: 1744 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQV 1802

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 1803 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 1858

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 1859 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 1918

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 1919 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNVRQISAGRCHSAAW 1969

Query: 339  NA 340
             A
Sbjct: 1970 TA 1971



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 1660 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 1719

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 1720 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 1777

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 1778 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 1824

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 1825 GDYGKLGL---GNSTAKSSPQKVDV 1846



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 1699

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P   +  L+   VVQ++ G+ +  
Sbjct: 1700 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPR-QIEALQGEEVVQMSCGFKHSA 1758

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 1759 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 1813

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 1814 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 1873

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 1874 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVGA-------EHTLALA 1918

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 1919 STGDVYAWGSNSEGQLGLGHTNHVRE 1944



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 1736 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 1795

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 1796 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 1855

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +        L  + +  +
Sbjct: 1856 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDV 1907

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 1908 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR--QISAG 1962

Query: 220  AWHAA 224
              H+A
Sbjct: 1963 RCHSA 1967



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 5/150 (3%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 1828 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 1887

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVE 143
                   PQ +  L  + +   A+G   T  L+  G VY +   ++ +LG  HT  N V 
Sbjct: 1888 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT--NHVR 1943

Query: 144  PHPLLGTLENIPVVQIAAGYCYLLALACQP 173
               L+  L+   V QI+AG C+  A    P
Sbjct: 1944 EPTLVTVLQGKNVRQISAGRCHSAAWTAPP 1973


>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 478

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 35/270 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-- 95
           PL      G+RI   AAG   T+ +SD GQV+ +G    G+   G +  K+V+SP L+  
Sbjct: 214 PLMVTLAPGVRITNVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSR-IKMVSSPHLIPC 272

Query: 96  -------------------------ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
                                     +    +V + A G   +A+++  G + TF WG  
Sbjct: 273 IDASASGKDRSLIVHQGNLTPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLY 332

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            + G  T  + + P   +  L  I V+ IAAG   L    C  +   VY+ G    G+L 
Sbjct: 333 GQCGQGTTNDQLRPA-CVPALSGIKVISIAAG---LWHTVCISADGHVYTFGGNQFGQL- 387

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
            G+ TD+  P+ +    L +    +V+ GA H+AV+ +DG+V +WGW +YG LG G+   
Sbjct: 388 -GTDTDQTEPKQLYAPSLGSKHAKIVSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSID 446

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            ++P  V  +   +  ++A G + T +++E
Sbjct: 447 RNIPSQV-PIEGYRPKNIACGWWHTLLLAE 475



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 165/388 (42%), Gaps = 77/388 (19%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG------------KDSFGEAEYGVQG 85
           PL C +     +++AAAG    + +++ G+V+ +G            +D+ G+    +Q 
Sbjct: 103 PLPCEA----SVVKAAAGWAHCVSVTETGEVFTWGWKECVPSVKIIQRDNTGKQNALLQ- 157

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 145
           T+ V+S     SL    V+ +        ++ R  RV      +  +    + P+  E  
Sbjct: 158 TEKVSSRSEGSSLTRGTVLNSDSKRTGDEIVKRR-RV------SPTKEDFESSPSGDEFF 210

Query: 146 ---PLLGTL-ENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGSRTDE-KH 199
              PL+ TL   + +  +AAG  + LAL    S M  V+  G G  G+LG GSR      
Sbjct: 211 TVLPLMVTLAPGVRITNVAAGGRHTLAL----SDMGQVWGWGYGGEGQLGLGSRIKMVSS 266

Query: 200 PRLI---------EQFQLL----NLQPVV------------VAAGAWHAAVVGQDGRVCT 234
           P LI         +   L+    NL P              +A G  H+A+V   G + T
Sbjct: 267 PHLIPCIDASASGKDRSLIVHQGNLTPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLT 326

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +GWG YG  G G    +  P  V AL+ +K I +A G + T  +S DG VY+FG  +   
Sbjct: 327 FGWGLYGQCGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQ 386

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG     D        +  P    SL   + ++V            H+  LTE G++Y++
Sbjct: 387 LG----TDTDQTEPKQLYAP----SLGSKHAKIVSCGAR-------HSAVLTEDGQVYSW 431

Query: 355 GAGDKGQLGIELVNNQTERGNPERVDID 382
           G    GQLG+    +  +R  P +V I+
Sbjct: 432 GWNKYGQLGL---GDSIDRNIPSQVPIE 456


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I D G V+ FGK  F E          ++S   V   +N  V + + G+  TA++ + GR
Sbjct: 9   IPDTGAVFTFGKSRFAED---------LSSHFFV---RNDPVKEISCGDEHTALVCKSGR 56

Query: 122 VYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCY-LLALACQPSGMAVY 179
           V+ F   +  +LG  HT+   V     L +L+    + +A G  + L++  C      ++
Sbjct: 57  VFLFGKNDFGQLGFGHTKI--VNKPSCLKSLKPFQSIHVACGKSHTLISTECNK----IF 110

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           + GC   G+LG G   D   P++I          + ++AG  H+A + ++G V  WG   
Sbjct: 111 AFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNS 170

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G  G  NE     P+ ++  N + +I  + G Y T  +S  G VY+FG  ++  LG + 
Sbjct: 171 DGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFISL-GKVYTFGEDDNGKLGRSD 227

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
                         P  V    +++E  + +    S     HT  LTESGK YAFG+   
Sbjct: 228 ------------KLPNDVPEGVELDENCISVKCGGS-----HTIILTESGKAYAFGSNFS 270

Query: 360 GQLGIELVNNQTERGNPERVDI 381
           GQLG  L N +TE   P+RV+ 
Sbjct: 271 GQLG--LGNFETEFSIPQRVNF 290



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 28/316 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           + + + G   T L+  +G+V+ FGK+ FG+  +G   TK+V  P  ++SLK    +  A 
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG--HTKIVNKPSCLKSLKPFQSIHVAC 95

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLL 167
           G   T + +   +++ F   +D +LG     +   P  +   LE    ++ ++AG C+  
Sbjct: 96  GKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAG-CHHS 154

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVV 226
           A   +    +VY  G    G+ G  +     +PR IE FQ     P+  ++ G +H A +
Sbjct: 155 AFLTEEG--SVYIWGDNSDGQCGIKNENYLLNPRKIE-FQ----NPINSISCGYYHTAFI 207

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G+V T+G    G LG  ++    VP+ V+   D   I V  G   T +++E G  Y+
Sbjct: 208 SL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVEL--DENCISVKCGGSHTIILTESGKAYA 264

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG   S  L       G GN       PQ V      +E V  I +T      +H+  LT
Sbjct: 265 FGSNFSGQL-------GLGNFETEFSIPQRVNF---TDENVNLIYVT---CGESHSAFLT 311

Query: 347 ESGKLYAFGAGDKGQL 362
           + GKLY  G G  G+L
Sbjct: 312 DEGKLYTCGDGRNGKL 327



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 16/235 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           II  +AG   +  +++ G VY +G +S G+   G++    + +P+ +E    I  +  + 
Sbjct: 144 IIALSAGCHHSAFLTEEGSVYIWGDNSDGQC--GIKNENYLLNPRKIEFQNPINSI--SC 199

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G + TA +S  G+VYTF   ++ +LG   + PNDV     L   EN   V+    +  +L
Sbjct: 200 GYYHTAFISL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVELD--ENCISVKCGGSHTIIL 256

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
                 SG A Y+ G    G+LG G+  T+   P+ +  F   N+  + V  G  H+A +
Sbjct: 257 T----ESGKA-YAFGSNFSGQLGLGNFETEFSIPQRV-NFTDENVNLIYVTCGESHSAFL 310

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
             +G++ T G GR G L + +E      P  ++        +V+ G   T V+++
Sbjct: 311 TDEGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAK 365


>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
 gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
          Length = 388

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 31/264 (11%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAA 161
           V  AA G   +  L ++G V+ +   ++A+LG  T+ +   P P+    +N+  V+ I+A
Sbjct: 32  VEAAAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYSPIPV----KNLDSVIGISA 87

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G     + A +  G A ++ G  L G+LG G+  D   P  ++    +    V + AG+ 
Sbjct: 88  GGA--ASFAVRSDGTA-WAWGSNLFGQLGDGTTYDRLTPVQVQGLHSV----VALEAGSS 140

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+  V  DG V  WGW  YG LG G  +  S P  VQAL+ V  + VA G   +  V  D
Sbjct: 141 HSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDSV--VAVAAGSGHSLAVKAD 198

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V+++G   S  LG     DG    +     P  VT L      VV +S  N+      
Sbjct: 199 GSVWAWGANWSGQLG-----DG---TYTESTVPVQVTGLGS----VVSVSAGNTF----- 241

Query: 342 TFALTESGKLYAFGAGDKGQLGIE 365
           + AL   G ++A+GA D GQLG E
Sbjct: 242 SSALKSDGTVWAWGANDSGQLGSE 265



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 36/314 (11%)

Query: 52  AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 111
           AA G G ++ +   G V+A+G +S  +   G +  +   SP  V++L ++  + A  G  
Sbjct: 35  AAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRY--SPIPVKNLDSVIGISA--GGA 90

Query: 112 FTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
            +  +  +G  +  +WG++   +LG  T  + + P  + G      VV + AG  + LA+
Sbjct: 91  ASFAVRSDGTAW--AWGSNLFGQLGDGTTYDRLTPVQVQGLHS---VVALEAGSSHSLAV 145

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
               S   V++ G    G+LG G+      P  ++    +    V VAAG+ H+  V  D
Sbjct: 146 KADGS---VWAWGWNTYGQLGDGTTDSRSTPVQVQALDSV----VAVAAGSGHSLAVKAD 198

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V  WG    G LG G     +VP  V  L  V  + V+ G+  +  +  DG V+++G 
Sbjct: 199 GSVWAWGANWSGQLGDGTYTESTVPVQVTGLGSV--VSVSAGNTFSSALKSDGTVWAWGA 256

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
            +S  LG    A       +N  +P  VT +                    ++ AL   G
Sbjct: 257 NDSGQLGSETAA-------SNSPSPVQVTGMASAAAISSGSD---------YSLALKNDG 300

Query: 350 KLYAFGAGDKGQLG 363
            ++A+G    GQLG
Sbjct: 301 TVWAWGYNSSGQLG 314



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 36/344 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+  ++L    +I  +AG   +  +   G  +A+G + FG+   G    +L  +P  V+
Sbjct: 72  SPIPVKNLD--SVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRL--TPVQVQ 127

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L ++  ++A  G+  +  +  +G V+ + W    +LG  T  +   P  +   L++  V
Sbjct: 128 GLHSVVALEA--GSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQ-ALDS--V 182

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           V +AAG  + LA+    S   V++ G    G+LG G+ T+   P      Q+  L  VV 
Sbjct: 183 VAVAAGSGHSLAVKADGS---VWAWGANWSGQLGDGTYTESTVP-----VQVTGLGSVVS 234

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V+AG   ++ +  DG V  WG    G LG       S P  VQ      A  +++G   +
Sbjct: 235 VSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNS-PSPVQVTGMASAAAISSGSDYS 293

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G   S  LG+                P  VT L  V      +S+   
Sbjct: 294 LALKNDGTVWAWGYNSSGQLGNGTTTSSS--------APVQVTRLGSV------VSVAAG 339

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                H  A+   G ++ +G    GQLG        +R  P +V
Sbjct: 340 PL---HGLAVQSGGTVWDWGNNTYGQLGDGYFGGGYDRSLPFQV 380


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 33/349 (9%)

Query: 21  NERNGKRNLLGREVNGTPLY----CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 76
           N R+G+   LG  V G P++    C    G  + + A G   T+ +   G VY  G +S 
Sbjct: 6   NARDGQ---LGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSC 62

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
           G+  +   G     SP+LV +L    +   + G   +  ++ +G+V+ +  G+  +LG  
Sbjct: 63  GQLGHDKAGN----SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLE 118

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RT 195
           T    V    LL  L +  + Q+  G  + +AL+       +++ G    G+LG G   T
Sbjct: 119 TAETAVRIPRLLKKLCDHSISQVVCGNQHCIALS---RDGQLFTWGQNSSGQLGLGKGET 175

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
            +  P  ++    + L  +   AG  H   +   G V  WG  + G LG  +++  +VP 
Sbjct: 176 SKLSPSPVKSLAGIPLAQI--TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPC 233

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            ++ L   + ++++ GD  T  +++ G +++FG G    LGH     G  N   N L P+
Sbjct: 234 HIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGH-----GSSN---NELLPR 285

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
            V  L  +   V QI+         HT A    SG +YAFG    GQLG
Sbjct: 286 RVMEL--MGTEVSQITCGRH-----HTLAFVPSSGTVYAFGCNSHGQLG 327



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 135/279 (48%), Gaps = 16/279 (5%)

Query: 30  LGREVNG-TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG +  G +P    +L   +I   + G   ++ +++ GQV+ +G    G+       T  
Sbjct: 65  LGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETA- 123

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPL 147
           V  P+L++ L +  + Q   GN     LSR+G+++T+   +  +LG    E + + P P+
Sbjct: 124 VRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPV 183

Query: 148 LGTLENIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +L  IP+ QI AG  +C+ L+L    SG AV+  G    G+LG   + D   P  I  
Sbjct: 184 -KSLAGIPLAQITAGGDHCFALSL----SG-AVFGWGKNKAGQLGLNDKQDRAVPCHI-- 235

Query: 206 FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            + L  Q VV ++ G  H A + + G + T+G G  G LGHG+   E +P+ V  L   +
Sbjct: 236 -KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTE 294

Query: 265 AIHVATGDYTTF-VVSEDGDVYSFGCGESASLGHNAIAD 302
              +  G + T   V   G VY+FGC     LG   +AD
Sbjct: 295 VSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILAD 333



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 137/305 (44%), Gaps = 29/305 (9%)

Query: 77  GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
           G+   GV+G   V  P++        + + A G   T  L ++G VYT    +  +LGH 
Sbjct: 10  GQLGIGVEGNP-VFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHD 68

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRT 195
              N  E   L+G L+   +  ++ G  + +A+  Q     V+  G G GG+LG   + T
Sbjct: 69  KAGNSPE---LVGALDTQKITMVSCGRAHSVAVNEQGQ---VFVWGAGDGGQLGLETAET 122

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-P 254
             + PRL+++    ++  VV   G  H   + +DG++ TWG    G LG G  E   + P
Sbjct: 123 AVRIPRLLKKLCDHSISQVV--CGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP 180

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             V++L  +    +  G    F +S  G V+ +G  ++  LG N   D     H   L  
Sbjct: 181 SPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS 240

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
           Q          RVV IS  +      HT ALT+SG L+ FG G +GQLG    NN+    
Sbjct: 241 Q----------RVVYISCGDE-----HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-- 283

Query: 375 NPERV 379
            P RV
Sbjct: 284 -PRRV 287



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 16/235 (6%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI + Q  AG      +S +G V+ +GK+  G+   G+   +    P  ++
Sbjct: 179 SPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQ--LGLNDKQDRAVPCHIK 236

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L++  VV  + G+  TA L++ G ++TF  G+  +LGH +  N++ P  ++  L    V
Sbjct: 237 FLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-ELMGTEV 295

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQLLNLQP-- 213
            QI  G  + LA    PS   VY+ GC   G+LG G   D + P  ++  F  LNL+   
Sbjct: 296 SQITCGRHHTLAFV--PSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGK 353

Query: 214 --VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
             + +  G     V+     +C    G +  L + +E+C  VP+  +  N  K++
Sbjct: 354 VYLRIDTGFLKYTVI---KIICG---GDHSFLMYSSEQCPEVPEDFRVFNVSKSL 402


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 28/322 (8%)

Query: 46  GIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           G R + + A G   T+++   G VY+ G + FG+        KL    + V +L    + 
Sbjct: 89  GTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIR 144

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
             A G   +  LS  G+V+++    + +LG  TE        ++  L  + +VQIA G  
Sbjct: 145 AVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAV 204

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + LALA   +   ++S G    G+LG G  S  +E+ PR +    L+ +   +VA GA H
Sbjct: 205 HCLALA---NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMH 259

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           +  +   G V  WG    G LG  ++     P V++ L   +  HV  G+  T  ++ DG
Sbjct: 260 SVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 319

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            V++FG G    LGH            N   P+ V  L  +   + Q+S         HT
Sbjct: 320 GVFTFGAGTYGQLGHGV--------KVNEAVPRRVVEL--MGTAISQLSCG-----RCHT 364

Query: 343 FALT-ESGKLYAFGAGDKGQLG 363
            A   +SG+LY FG G  GQLG
Sbjct: 365 VAYAPQSGRLYIFGLGMSGQLG 386



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 14/263 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L    I   A G   ++ +SDAGQV+++G +  G+   G +    +  P++++ L  + 
Sbjct: 137 ALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLH 195

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQ 158
           +VQ A G      L+  G +  FSWG +A     LG  +  N+  P   +  L  +P+  
Sbjct: 196 IVQIACGAVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPR-RVSHLVGVPLAL 252

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +A G  + + L   PSG  V+  G    G+LG   + D  HP +++  +   ++   V  
Sbjct: 253 VACGAMHSVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCC 307

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFV 277
           G  H A +  DG V T+G G YG LGHG +  E+VP+ V  L       ++ G  +T   
Sbjct: 308 GENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAY 367

Query: 278 VSEDGDVYSFGCGESASLGHNAI 300
             + G +Y FG G S  LG+  +
Sbjct: 368 APQSGRLYIFGLGMSGQLGNGTL 390



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 135/312 (43%), Gaps = 27/312 (8%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G+G  ML+   G +   G+    + + GV     V+ P+ V       V + A G+  T 
Sbjct: 46  GSGAPMLLYSWG-LGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTL 104

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           VL   G VY+    +  +LG       +E    L   E   +  +A G  + LAL+    
Sbjct: 105 VLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHE---IRAVACGEAHSLALS---D 158

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
              V+S GC   G+LG G+  + +  P++I++   L++  V +A GA H   +  +G + 
Sbjct: 159 AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHI--VQIACGAVHCLALANNGELF 216

Query: 234 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +WG    G LG G +    E +P+ V  L  V    VA G   +  ++  G V+ +G   
Sbjct: 217 SWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 276

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LG   ++D +   H  VL P     +K V                 HT ALT  G +
Sbjct: 277 CGQLG---LSDQRDRLHPTVLKPLRSQRIKHV------------CCGENHTAALTADGGV 321

Query: 352 YAFGAGDKGQLG 363
           + FGAG  GQLG
Sbjct: 322 FTFGAGTYGQLG 333



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 11/226 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   + L  + I+Q A GA   + +++ G+++++G ++ G+   G   T     P+ V  
Sbjct: 185 PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH 244

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  + +   A G   +  L+  G V  F WG ++  +LG   + + + P  +L  L +  
Sbjct: 245 LVGVPLALVACGAMHSVGLTPSGTV--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQR 301

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +  +  G  +  AL    +   V++ G G  G+LGHG + +E  PR +   +L+      
Sbjct: 302 IKHVCCGENHTAALT---ADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQ 356

Query: 216 VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           ++ G  H  A   Q GR+  +G G  G LG+G  E  ++P  V  L
Sbjct: 357 LSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPGL 402



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 176 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           M +YS G G  G+LG         + T    P  + +F    ++ V  A G  H  V+  
Sbjct: 51  MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 108

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           +G V + G   +G LG       S+ K+ Q  AL+  +   VA G+  +  +S+ G V+S
Sbjct: 109 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 164

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +GC  +  LG        G    + L P+++  L  ++  +VQI+         H  AL 
Sbjct: 165 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 210

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +G+L+++G    GQLG+   +   ER  P RV
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNERL-PRRV 242


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 28/301 (9%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---FVVQAAIGNFFTAVLSREGRVY 123
           Q+Y++G + FG+     Q   ++  P  VE L N+    +  A+  +   A++    +VY
Sbjct: 97  QIYSWGYNYFGQCASNSQ--SIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVY 154

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
            +      +LG   + N   P P+      +    ++ G  + +AL+       +YS GC
Sbjct: 155 AWGCNRWGQLGTGDQTNRATPTPIAIATPTV-FTSVSCGAQHSMALSNYGE---LYSWGC 210

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G GG+ GHGS      P+++    L+  Q   +A G  H+A     G V TWGW +YG L
Sbjct: 211 GTGGRTGHGSEAPSLSPQVVSA--LVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQL 268

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           G+   +    P  ++ +     + V  G   T +++ +G +YSFG      LG    AD 
Sbjct: 269 GNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADS 328

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           Q         P+ V     + E  V I    S Y+  HT  LT  G +Y++G    G LG
Sbjct: 329 Q--------QPKKV----DLPEHAVDIV---SGYY--HTLCLTNKGNVYSWGYMSDGALG 371

Query: 364 I 364
           +
Sbjct: 372 L 372



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 51/259 (19%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    +L G +I   A G   +      G VY +G + +G  + G    K   SP  + 
Sbjct: 226 SPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYG--QLGNNTAKKHLSPNKLR 283

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP- 155
            ++   VV+   G   T +L+ EG +Y+F +    +LG     +  +P  +     ++P 
Sbjct: 284 DMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKV-----DLPE 338

Query: 156 -VVQIAAGYCYLLALACQPSGMAVYSVG------CGLGGKLGHGSRTDEKHPRLIEQFQL 208
             V I +GY + L L  + +   VYS G       GLG   GH S+     P+LI    +
Sbjct: 339 HAVDIVSGYYHTLCLTNKGN---VYSWGYMSDGALGLGDIAGHQSK-----PKLIPLSHI 390

Query: 209 LN-------------------LQPVV--------VAAGAWHAAVVGQDGRVCTWGWGRYG 241
            +                     P          +AAGAW++A++   G++  +G+G   
Sbjct: 391 RHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFGDSY 450

Query: 242 CLGHG-NEECESVPKVVQA 259
            +G+G N E + +P  V++
Sbjct: 451 RIGNGTNTEDQDIPCQVKS 469


>gi|442324509|ref|YP_007364530.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441492151|gb|AGC48846.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 586

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 141/329 (42%), Gaps = 38/329 (11%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G+VYA+G+++ G+   G         PQLV  L+   VV  A    F+  L   G V+T+
Sbjct: 234 GRVYAWGRNTRGQLGLGAGSAAYSNVPQLVPGLEG--VVSIAFNQSFSMALDASGAVWTW 291

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPV--------VQIAAGYCYLLALACQPSGMA 177
              ++ +LGH T P   +P     +L + P         V IAAGY + L L    +   
Sbjct: 292 GENSEGQLGHGTPPEPGQPQTPGASLSDSPARVPGLTGAVAIAAGYSHGLVLMEDGT--- 348

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V + G    G+LG G+ T   +   +          V V AG+ H+AV+ +DG V  WG 
Sbjct: 349 VRAFGANDEGQLGDGTTTSRNYALPVPGVT----DAVKVVAGSAHSAVLKRDGTVWVWGR 404

Query: 238 GRYGCLGHGNEECESVPK--VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
             YG LG G       P   VV  L +V  + +A G    F V  DG V ++G G S  L
Sbjct: 405 NTYGNLGTGTAGKPGRPSADVVPGLANV--VDIANGRDHFFAVHADGTVSTWGLGASGQL 462

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G+     G G + A  +    VT  + V          N  Y     FA    G L A+G
Sbjct: 463 GNG--LKGVGVQSATPVKAHGVTDARAV--------FANGNY----GFARRADGSLLAWG 508

Query: 356 AGDKGQLGIELVNNQTERGNPERVDIDLS 384
               GQLG   V+++ +R  P      +S
Sbjct: 509 QNGNGQLG---VSDKADRVEPTPSSTQVS 534



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%)

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYG--CLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           AG  H+  + +DGRV  WG    G   LG G+    +VP++V  L  V  + +A     +
Sbjct: 223 AGGLHSGAL-RDGRVYAWGRNTRGQLGLGAGSAAYSNVPQLVPGLEGV--VSIAFNQSFS 279

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +   G V+++G      LGH     G         TP    SL     RV  ++   +
Sbjct: 280 MALDASGAVWTWGENSEGQLGH-----GTPPEPGQPQTPG--ASLSDSPARVPGLTGAVA 332

Query: 336 IYWN-AHTFALTESGKLYAFGAGDKGQLG 363
           I    +H   L E G + AFGA D+GQLG
Sbjct: 333 IAAGYSHGLVLMEDGTVRAFGANDEGQLG 361



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 22/283 (7%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+    G  ++ +P     L G   I  AAG    +++ + G V AFG +  G+   G  
Sbjct: 308 GQPQTPGASLSDSPARVPGLTGAVAI--AAGYSHGLVLMEDGTVRAFGANDEGQLGDGTT 365

Query: 85  GTK--LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            ++   +  P + +++K +       G+  +AVL R+G V+ +       LG  T     
Sbjct: 366 TSRNYALPVPGVTDAVKVV------AGSAHSAVLKRDGTVWVWGRNTYGNLGTGTAGKPG 419

Query: 143 EPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            P   ++  L N  VV IA G  +  A+    +   V + G G  G+LG+G +       
Sbjct: 420 RPSADVVPGLAN--VVDIANGRDHFFAVHADGT---VSTWGLGASGQLGNGLKGVGVQSA 474

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQA 259
              +   +     V A G +  A    DG +  WG    G LG  +  +  E  P   Q 
Sbjct: 475 TPVKAHGVTDARAVFANGNYGFARR-ADGSLLAWGQNGNGQLGVSDKADRVEPTPSSTQ- 532

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           ++ + ++ +  G      V  DG VY++G     SLG + I D
Sbjct: 533 VSPLSSMGM--GATHVVAVRGDGSVYAWGWNLEGSLGPSGIID 573


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 158/338 (46%), Gaps = 39/338 (11%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK------- 99
           ++I Q A G   ++++ D G V++ G + F   + G  G K    P L E+L        
Sbjct: 52  LKIRQIACGRHHSVMLLDDGSVFSCGNNDF--YQLGHDGIK--RKPNLYENLHWYIDVKQ 107

Query: 100 ---NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV---EPHPLLGTLEN 153
               I V+  A G+     L+ +G +  FSWG++       E  +V     +P +  +  
Sbjct: 108 SFVGIHVISVACGDAHCVALTNDGHL--FSWGSNVYGQLGVERMNVVAKARYPRIQEINL 165

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
             +VQIA G  + LAL  + +   +++ G    G+LG G+R     P  + +  L+ +  
Sbjct: 166 ANIVQIACGSNHSLAL--ESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNK--LMGIPI 221

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +AAGA H+ V+   G V  WG   +G +G   +     P +V+ L   K I +A G+ 
Sbjct: 222 CQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGED 281

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  V+  G +++FG G    LGH       GN+++ +   Q++  +  V   V+ ++  
Sbjct: 282 FSVAVTATGGLFTFGAGTYGQLGH-------GNQNSELFPKQVMELMGSV---VLDVACG 331

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
                  HT A+TE+ KLYAFG    GQLG+  V + T
Sbjct: 332 -----RCHTLAITEN-KLYAFGLNTSGQLGLLNVKHTT 363



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 7/159 (4%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P     L GI I Q AAGA  +++++ +G V+ +GK+ FG+   G    + +  
Sbjct: 204 RESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQI--GQNEQRDILY 261

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P LV+ L+   V++ A G  F+  ++  G ++TF  G   +LGH  + +++ P  ++  +
Sbjct: 262 PSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELM 321

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            ++ V+ +A G C+ LA+    +   +Y+ G    G+LG
Sbjct: 322 GSV-VLDVACGRCHTLAI----TENKLYAFGLNTSGQLG 355



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G+ G  G   E   S+  V    N +K   +A G + + ++ +DG V+S G  +   LGH
Sbjct: 27  GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86

Query: 298 NAIADGQGNRHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           + I             P L  +L     V +  V I + +    +AH  ALT  G L+++
Sbjct: 87  DGIKR----------KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSW 136

Query: 355 GAGDKGQLGIELVNNQTERGNPERVDIDLS 384
           G+   GQLG+E +N   +   P   +I+L+
Sbjct: 137 GSNVYGQLGVERMNVVAKARYPRIQEINLA 166


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 146/316 (46%), Gaps = 39/316 (12%)

Query: 61  LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
           ++++  +VY +G +S  +   G Q  + +  P+L  +  N   ++A  G + T V+  +G
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQ--EKILQPKLSPAFANAQTIEA--GQYCTFVVYSDG 427

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPL----LGTLENIPVVQIAAGYCYLLALACQPSGM 176
            V     G+  RLG     N      L       +  I   + + G+     LA    G 
Sbjct: 428 TVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGH----TLALTADG- 482

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            V+S G G  GKLGHG+ + +K+P+ I Q  L       ++AG  H+A V +DG + TWG
Sbjct: 483 EVFSWGDGDYGKLGHGNSSTQKYPKQI-QGALQGKVVKSISAGYRHSAAVTEDGELFTWG 541

Query: 237 WGRYGCLGHGNEECE---------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            G YG LGHG+   +           PKV++AL  +    V  G  ++  ++  G ++++
Sbjct: 542 EGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAW 601

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           GCG            G G+  +  L P+LV  L   N R+V ++  +S     H  ALT 
Sbjct: 602 GCGACL---------GCGSPESTALRPKLVEEL--ANTRIVDVACGDS-----HCLALTH 645

Query: 348 SGKLYAFGAGDKGQLG 363
             ++YA+G    GQ G
Sbjct: 646 DNEVYAWGNNAMGQCG 661



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 27/299 (9%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
           AG   T ++   G V A GK S+G    G    +        +    I  + ++ G +  
Sbjct: 415 AGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGH 474

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T  L+ +G V+++  G+  +LGH        P  + G L+   V  I+AGY +  A+   
Sbjct: 475 TLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVT-- 532

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE---------KHPRLIEQFQLLNLQPVVVAAGAWHA 223
                +++ G G  G+LGHG    +           P++IE   L+ L    V  G+  +
Sbjct: 533 -EDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEA--LVGLYIRKVCCGSQSS 589

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             +   G++  WG G   CLG G+ E  ++ PK+V+ L + + + VA GD     ++ D 
Sbjct: 590 LALTSTGQLFAWGCG--ACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDN 647

Query: 283 DVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           +VY++G        +NA+   GQG+  + +  P+ V  L  V    +    ++S+ W A
Sbjct: 648 EVYAWG--------NNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTA 698



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 47  IRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           IR I ++ G+ G T+ ++  G+V+++G   +G+  +G   T+     Q+  +L+   V  
Sbjct: 462 IRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPK-QIQGALQGKVVKS 520

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGH--------HTEPNDVEPHPLLGTLENIPVV 157
            + G   +A ++ +G ++T+  G+  RLGH        H + N V    ++  L  + + 
Sbjct: 521 ISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIR 580

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVV 216
           ++  G    LAL    S   +++ GCG    LG GS  +    P+L+E+  L N + V V
Sbjct: 581 KVCCGSQSSLALT---STGQLFAWGCG--ACLGCGSPESTALRPKLVEE--LANTRIVDV 633

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
           A G  H   +  D  V  WG    G  G G+ +   + PK V  L+ V    ++ G
Sbjct: 634 ACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAG 689



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 21/205 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY  G     +L  GS+     P+L   F   N Q   + AG +   VV  DG V   G 
Sbjct: 379 VYVWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQ--TIEAGQYCTFVVYSDGTVRACGK 434

Query: 238 GRYGCLGHGNEECESVPKVVQALND--VKAIHVATG-DYTTFVVSEDGDVYSFGCGESAS 294
           G YG LG G+   ++  K +   +   ++ I  + G D  T  ++ DG+V+S+G G+   
Sbjct: 435 GSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGK 494

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH       GN        Q+  +L+   + V  IS         H+ A+TE G+L+ +
Sbjct: 495 LGH-------GNSSTQKYPKQIQGALQ--GKVVKSISAGYR-----HSAAVTEDGELFTW 540

Query: 355 GAGDKGQLGIELVNNQTERGNPERV 379
           G GD G+LG    N +   G+  RV
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRV 565



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 12/157 (7%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLV 95
           +LQG  +   +AG   +  +++ G+++ +G+  +G   +G    KL       V  P+++
Sbjct: 512 ALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVI 571

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E+L  +++ +   G+  +  L+  G++  F+WG  A LG  +  +      L+  L N  
Sbjct: 572 EALVGLYIRKVCCGSQSSLALTSTGQL--FAWGCGACLGCGSPESTALRPKLVEELANTR 629

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           +V +A G  + LAL        VY+ G    G+ G G
Sbjct: 630 IVDVACGDSHCLALT---HDNEVYAWGNNAMGQCGQG 663


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 38/291 (13%)

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
           G  GT+    P+ ++  K   +     G  +  +LS +G+ + +++              
Sbjct: 200 GSDGTR---KPKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYS------------- 243

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHP 200
           +E       L+   ++QI  G  + LAL+    G  +++ G  L G+LG GS+      P
Sbjct: 244 IEHARFQCILQEKXIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGIGSQFASIAIP 300

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           +++E    + L  V ++AG  H+  +   G + +WG   +G LG G+ + +  P +++AL
Sbjct: 301 QIVENLSGIPL--VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEAL 358

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
           ++ K   +A G   T ++++DG V++FG G+   LGHN+          N L P+LVT L
Sbjct: 359 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNST--------QNELRPRLVTEL 410

Query: 321 KQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLGIELVNNQ 370
                RV QI+         HT A +++ GK+++FG+G +GQLG    +NQ
Sbjct: 411 --AGNRVTQIACGRQ-----HTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQ 454



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 5/163 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L GI ++Q +AG   +M +S +G +Y++G++ FG  + G+  T     P L+E+
Sbjct: 300 PQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFG--QLGLGHTDGKDFPSLIEA 357

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L N  V   A G   TA+L+++G V+TF  G   +LGH++  N++ P  L+  L    V 
Sbjct: 358 LDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPR-LVTELAGNRVT 416

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           QIA G  + LA         V+S G G  G+LG+G   ++  P
Sbjct: 417 QIACGRQHTLAYVSDLG--KVFSFGSGKEGQLGNGGTHNQLIP 457



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G Q   +   PQ+VE+L  I +
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAI-PQIVENLSGIPL 311

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VQ + G   +  LS  G +Y++   +  +LG  HT+  D     L+  L+N  V  +A G
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFP--SLIEALDNQKVEFLACG 369

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   L     G+ V++ G G  G+LGH S  +E  PRL+   +L   +   +A G  H
Sbjct: 370 GSHTALLT--KDGL-VFTFGAGKHGQLGHNSTQNELRPRLVT--ELAGNRVTQIACGRQH 424

Query: 223 A-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             A V   G+V ++G G+ G LG+G    + +P
Sbjct: 425 TLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L   ++   A G   T L++  G V+ FG    G+   G   T+    P+LV  
Sbjct: 352 PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQ--LGHNSTQNELRPRLVTE 409

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L    V Q A G   T A +S  G+V++F  G + +LG+    N + P P+
Sbjct: 410 LAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 460


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 28/322 (8%)

Query: 46  GIRII-QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           G R + + A G   T+++   G VY+ G + FG+        KL    + V +L    + 
Sbjct: 83  GTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKL----EQVAALSAHEIR 138

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
             A G   +  LS  G+V+++    + +LG  TE        ++  L  + +VQIA G  
Sbjct: 139 AVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAV 198

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + LALA   +   ++S G    G+LG G  S  +E+ PR +    L+ +   +VA GA H
Sbjct: 199 HCLALA---NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH--LVGVPLALVACGAMH 253

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           +  +   G V  WG    G LG  ++     P V++ L   +  HV  G+  T  ++ DG
Sbjct: 254 SVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 313

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            V++FG G    LGH            N   P+ V  L  +   + Q+S         HT
Sbjct: 314 GVFTFGAGTYGQLGHGV--------KVNEAVPRRVVEL--MGTAISQLSCG-----RCHT 358

Query: 343 FALT-ESGKLYAFGAGDKGQLG 363
            A   +SG+LY FG G  GQLG
Sbjct: 359 VAYAPQSGRLYIFGLGMSGQLG 380



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 14/263 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L    I   A G   ++ +SDAGQV+++G +  G+   G +    +  P++++ L  + 
Sbjct: 131 ALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL-RPKVIKKLATLH 189

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQ 158
           +VQ A G      L+  G +  FSWG +A     LG  +  N+  P   +  L  +P+  
Sbjct: 190 IVQIACGAVHCLALANNGEL--FSWGGNASGQLGLGRDSTGNERLPRR-VSHLVGVPLAL 246

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +A G  + + L   PSG  V+  G    G+LG   + D  HP +++  +   ++   V  
Sbjct: 247 VACGAMHSVGLT--PSG-TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKH--VCC 301

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFV 277
           G  H A +  DG V T+G G YG LGHG +  E+VP+ V  L       ++ G  +T   
Sbjct: 302 GENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAY 361

Query: 278 VSEDGDVYSFGCGESASLGHNAI 300
             + G +Y FG G S  LG+  +
Sbjct: 362 APQSGRLYIFGLGMSGQLGNGTL 384



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 135/312 (43%), Gaps = 27/312 (8%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G+G  ML+   G +   G+    + + GV     V+ P+ V       V + A G+  T 
Sbjct: 40  GSGAPMLLYSWG-LGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTL 98

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           VL   G VY+    +  +LG       +E    L   E   +  +A G  + LAL+    
Sbjct: 99  VLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHE---IRAVACGEAHSLALS---D 152

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
              V+S GC   G+LG G+  + +  P++I++   L++  V +A GA H   +  +G + 
Sbjct: 153 AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHI--VQIACGAVHCLALANNGELF 210

Query: 234 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           +WG    G LG G +    E +P+ V  L  V    VA G   +  ++  G V+ +G   
Sbjct: 211 SWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 270

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LG   ++D +   H  VL P     +K V                 HT ALT  G +
Sbjct: 271 CGQLG---LSDQRDRLHPTVLKPLRSQRIKHV------------CCGENHTAALTADGGV 315

Query: 352 YAFGAGDKGQLG 363
           + FGAG  GQLG
Sbjct: 316 FTFGAGTYGQLG 327



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 11/226 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   + L  + I+Q A GA   + +++ G+++++G ++ G+   G   T     P+ V  
Sbjct: 179 PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSH 238

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  + +   A G   +  L+  G V  F WG ++  +LG   + + + P  +L  L +  
Sbjct: 239 LVGVPLALVACGAMHSVGLTPSGTV--FVWGRNSCGQLGLSDQRDRLHP-TVLKPLRSQR 295

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +  +  G  +  AL    +   V++ G G  G+LGHG + +E  PR +   +L+      
Sbjct: 296 IKHVCCGENHTAALT---ADGGVFTFGAGTYGQLGHGVKVNEAVPRRV--VELMGTAISQ 350

Query: 216 VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           ++ G  H  A   Q GR+  +G G  G LG+G  E  ++P  V  L
Sbjct: 351 LSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)

Query: 176 MAVYSVGCGLGGKLGH-------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           M +YS G G  G+LG         + T    P  + +F    ++ V  A G  H  V+  
Sbjct: 45  MLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREV--ACGHKHTLVLLA 102

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           +G V + G   +G LG       S+ K+ Q  AL+  +   VA G+  +  +S+ G V+S
Sbjct: 103 NGSVYSCGANDFGQLGQD----RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFS 158

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +GC  +  LG        G    + L P+++  L  ++  +VQI+         H  AL 
Sbjct: 159 WGCNRNGQLG-------CGTEEESRLRPKVIKKLATLH--IVQIACGA-----VHCLALA 204

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +G+L+++G    GQLG+   +   ER  P RV
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNERL-PRRV 236


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 20/302 (6%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 2721 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 2778

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q+
Sbjct: 2779 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 2837

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 2838 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 2893

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
               +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 2894 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 2953

Query: 280  EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
              GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 2954 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 3004

Query: 339  NA 340
             A
Sbjct: 3005 TA 3006



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2695 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2754

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2755 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2812

Query: 298  NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                 G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 2813 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 2859

Query: 357  GDKGQLGIELVNNQTERGNPERVDI 381
            GD G+LG+    N T + +P++VD+
Sbjct: 2860 GDYGKLGL---GNSTAKSSPQKVDV 2881



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2734

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2735 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 2793

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
             +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 2794 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 2848

Query: 228  QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 2849 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 2908

Query: 287  FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
            F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 2909 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 2953

Query: 347  ESGKLYAFGAGDKGQLGIELVNNQTE 372
             +G +YA+G+  +GQLG+   N+  E
Sbjct: 2954 STGDVYAWGSNSEGQLGLGHTNHVRE 2979



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 71/245 (28%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
            P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 2771 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 2830

Query: 75   -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                     +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 2831 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 2890

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
            A G  F+  L+++G VYTF  G D  +G       +H  P  +   P+L     + +  +
Sbjct: 2891 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQI---PVLA---GVVIEDV 2942

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 2943 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 2997

Query: 220  AWHAA 224
              H+A
Sbjct: 2998 RCHSA 3002



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 2863 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-- 2920

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
              +    PQ +  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 2921 RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 2975

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 2976 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 3008


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 43  SLQGIRIIQ---AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
           +LQG  + Q   +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 230 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 287

Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
              VVQ + G   +AV++ +G+++TF  G+  RLG     N   P   +  LE   + Q+
Sbjct: 288 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-RVTALEGYQIGQV 346

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++ V  A G
Sbjct: 347 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV--ACG 402

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
              +  + +DG V T+G  R   L  G     + P+ +  L  V    VA G   T  ++
Sbjct: 403 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 462

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
             GDVY++G      LG           H N V  P LVT L+  N R +     +S  W
Sbjct: 463 STGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 513

Query: 339 NA 340
            A
Sbjct: 514 TA 515



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 22/205 (10%)

Query: 181 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
           + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 204 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 263

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 264 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 321

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
                G GN  +N   P+ VT+L+      V   L        HT A++  G + +AFG 
Sbjct: 322 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 368

Query: 357 GDKGQLGIELVNNQTERGNPERVDI 381
           GD G+LG+    N T + +P++VD+
Sbjct: 369 GDYGKLGL---GNSTAKSSPQKVDV 390



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
           Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 243

Query: 110 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
             +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 244 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSA 302

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            +    S   +++ G G  G+LG G+ +++K P  +   +    Q   VA G  H   V 
Sbjct: 303 VVT---SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 357

Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++DG VY+
Sbjct: 358 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYT 417

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           F  G+   +G   + +G+   H     PQ +  L  V    V +          HT AL 
Sbjct: 418 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVVIEDVAVG-------AEHTLALA 462

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
            +G +YA+G+  +GQLG+   N+  E
Sbjct: 463 STGDVYAWGSNSEGQLGLGHTNHVRE 488



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 71/245 (28%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD----------------------- 74
           P    +LQG  ++Q + G   + +++  G+++ FG                         
Sbjct: 280 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 339

Query: 75  -------------------------SFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQA 106
                                    +FG+ +YG  G   +   +SPQ V+ L  I + + 
Sbjct: 340 GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKV 399

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQI 159
           A G  F+  L+++G VYTF  G D  +G       +H  P  +        L  + +  +
Sbjct: 400 ACGTQFSVALTKDGHVYTF--GQDRLIGLPEGRARNHNRPQQIP------VLAGVVIEDV 451

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  + LALA   S   VY+ G    G+LG G     + P L+   Q  N++   ++AG
Sbjct: 452 AVGAEHTLALA---STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ--ISAG 506

Query: 220 AWHAA 224
             H+A
Sbjct: 507 RCHSA 511



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 5/150 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 372 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 431

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVE 143
                  PQ +  L  + +   A+G   T  L+  G VY +   ++ +LG  HT  N V 
Sbjct: 432 RNH--NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT--NHVR 487

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQP 173
              L+  L+   + QI+AG C+  A    P
Sbjct: 488 EPTLVTVLQGKNIRQISAGRCHSAAWTAPP 517


>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
 gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
          Length = 484

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 141/305 (46%), Gaps = 43/305 (14%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCR----SLQGIRIIQAAAGAG--RTMLISDAGQVYAF 71
           D+I      +N  G    G  L+      S+ G+R+    +G     ++LI++ G+  ++
Sbjct: 78  DLIGRNQLPKNATGSANRGQNLWGPHRYGSMSGVRVRSVISGPTSVHSILITEDGKAMSW 137

Query: 72  GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
           G++  G+  +G   TK V  P ++ESL    +V+AA G   T  L+ +G+V+ F      
Sbjct: 138 GRNDKGQLGHG--DTKRVDVPTVIESLAGFNIVEAACGRNHTLCLTDDGKVFAFGENKMG 195

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           +LG   E N   P P        PVV++A G  + + + C+    A+YS GC   G+LG+
Sbjct: 196 QLGLGNE-NAAVPSPTQIVYTGPPVVKVACGAEFSMVIDCR---GALYSFGCPEYGQLGN 251

Query: 192 GSRTDEKH--------------PRLIEQF----------QLLNLQPVVVAAGAWHAAVVG 227
              TD ++              PR I  F           + N+Q V +  G  H   + 
Sbjct: 252 --NTDGQYFVTSNKMAYDCELVPRRISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALD 309

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN----DVKAIHVATGDYTTFVVSEDGD 283
           +  RV TWG+G YG LGH  ++ E VP++V+  +      + I+ A   Y+  ++   G 
Sbjct: 310 KQKRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFDYPGRGARTIY-AGAFYSMGIMDNGGQ 368

Query: 284 VYSFG 288
           +Y +G
Sbjct: 369 LYLWG 373



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G++  + V  + +G   + ++     G A+ S G    G+LGHG       P +I
Sbjct: 102 PH-RYGSMSGVRVRSVISGPTSVHSILITEDGKAM-SWGRNDKGQLGHGDTKRVDVPTVI 159

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-ND 262
           E     N+  V  A G  H   +  DG+V  +G  + G LG GNE   +VP   Q +   
Sbjct: 160 ESLAGFNI--VEAACGRNHTLCLTDDGKVFAFGENKMGQLGLGNENA-AVPSPTQIVYTG 216

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ----GNRHAN--VLTPQL 316
              + VA G   + V+   G +YSFGC E   LG+N   DGQ     N+ A    L P+ 
Sbjct: 217 PPVVKVACGAEFSMVIDCRGALYSFGCPEYGQLGNN--TDGQYFVTSNKMAYDCELVPRR 274

Query: 317 VTSLKQVNER-----VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           ++   +  +      +  + L +      HT AL +  +++ +G G  G+LG
Sbjct: 275 ISVFIEKTKDGFINPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLG 326



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 30/130 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYG +        S  +V   ++   ++H       + +++EDG   S+G  +   
Sbjct: 100 WGPHRYGSM--------SGVRVRSVISGPTSVH-------SILITEDGKAMSWGRNDKGQ 144

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P ++ SL   N  +V+ +   +     HT  LT+ GK++AF
Sbjct: 145 LGH-----GDTKR---VDVPTVIESLAGFN--IVEAACGRN-----HTLCLTDDGKVFAF 189

Query: 355 GAGDKGQLGI 364
           G    GQLG+
Sbjct: 190 GENKMGQLGL 199


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 38/341 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  ++L    +I   +G   +M +   G V+ +G +  G+   G+     V +P  V 
Sbjct: 75  TPVMAKNLN--HVIDIHSGVRSSMALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVP 130

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L  I  +   +  +    LS  G V+T+   ++  LG+ T      P  + G  +   V
Sbjct: 131 GLSGIKAISGGLA-YHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD---V 186

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
             IAAG  Y LAL    +   V++ G    G+LG G+ T+   P      Q+  L  V+ 
Sbjct: 187 TAIAAGGYYSLALKSDGT---VWAWGVNGSGELGDGTTTERHVP-----VQVAGLTDVMA 238

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +AAG  H+  + QDG V  WG   YG LG G     + P  V+ L  + A  VA G Y +
Sbjct: 239 IAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHS 296

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V + G+V+S+G      LG ++        +A+ L P  VT ++ V E    IS    
Sbjct: 297 LAVDQAGNVWSWGDNSQQQLGLSS--------NASSLIPVPVTGIEHVRE----ISAG-- 342

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
                H+ A+ + G ++ +G    GQLG    NN   RG P
Sbjct: 343 ---GFHSVAMKKDGTVWGWGYNSGGQLGDGTYNN--TRGIP 378



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 35/273 (12%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G + TA L   G VY++ +G+  +LG  T   +    P++    N  V+ I +G    +A
Sbjct: 41  GYYHTASLVSSGEVYSWGYGDRGQLGDGTW--NTRTTPVMAKNLN-HVIDIHSGVRSSMA 97

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--AWHAAVV 226
           L    +   V++ G    G+LG G+ T+   P      Q+  L  +   +G  A+H   +
Sbjct: 98  LRQDGT---VWTWGANENGQLGIGTITNVNAPA-----QVPGLSGIKAISGGLAYHGMAL 149

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            ++G V TWG    G LG+G    ++ P +V  L+DV AI  A G Y +  +  DG V++
Sbjct: 150 SENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDVTAI--AAGGYYSLALKSDGTVWA 207

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G   S  LG     +    RH  V    L          V+ I+   S     H+ A+ 
Sbjct: 208 WGVNGSGELGDGTTTE----RHVPVQVAGLT--------DVMAIAAGGS-----HSLAIR 250

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           + G ++A+G    G LG      +T R  P +V
Sbjct: 251 QDGTVWAWGNNTYGTLGD---GTRTHRTRPVQV 280



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG +H A +   G V +WG+G  G LG G     + P + + LN V  IH  +G  ++
Sbjct: 38  LVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             + +DG V+++G  E+  LG   I         NV  P  V  L  +       +++  
Sbjct: 96  MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGIK------AISGG 141

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + +  H  AL+E+G ++ +G  D G+LG
Sbjct: 142 LAY--HGMALSENGTVWTWGKNDNGELG 167


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%), Gaps = 20/253 (7%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAGA  T+ + + G V+A+G +  G+   G    + +  P  V+ + +  VV  A G + 
Sbjct: 232 AAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTI--PVQVKGISD--VVAIAAGMYH 287

Query: 113 TAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLAL 169
           T  L  +G V+  +WG++   +LG+ T   +    P+   ++ I  V+ IAAG  Y + L
Sbjct: 288 TVALKNDGTVW--AWGDNEHDQLGNETTKEEYHSTPV--QVKGISDVKAIAAGASYTVVL 343

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
               +   V++ G    GKLG G+  +   P  ++   + N++   +AAGA+H  V+  D
Sbjct: 344 KNDGT---VWAWGVNEYGKLGDGTTNNSFTP--VQVNGISNVK--AIAAGAYHTVVLKND 396

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V TWG+  YG LG+G     S P  V+ ++DVKAI  A G   T  +  DG V+++GC
Sbjct: 397 GTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKAI--AAGACHTVALKNDGTVWAWGC 454

Query: 290 GESASLGHNAIAD 302
                LG+    D
Sbjct: 455 NYYGELGNGTAVD 467



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 113/257 (43%), Gaps = 27/257 (10%)

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           A G + T  L  +G V+ + W +  +LG  T  N   P  + G  +   VV IAAG  + 
Sbjct: 232 AAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISD---VVAIAAGMYHT 288

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           +AL    +   V++ G     +LG+ +  +E H   ++   + +++   +AAGA +  V+
Sbjct: 289 VALKNDGT---VWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVK--AIAAGASYTVVL 343

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG V  WG   YG LG G       P  V  +++VKAI  A G Y T V+  DG V++
Sbjct: 344 KNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAI--AAGAYHTVVLKNDGTVWT 401

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G      LG+    D          TP  V  +  V                 HT AL 
Sbjct: 402 WGYNHYGELGNGTTVDSS--------TPVQVKGISDVKAIAAGA---------CHTVALK 444

Query: 347 ESGKLYAFGAGDKGQLG 363
             G ++A+G    G+LG
Sbjct: 445 NDGTVWAWGCNYYGELG 461



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 19/161 (11%)

Query: 212 QPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           QP V  +AAGA+H   +  DG V  WGW   G LG G     ++P  V+ ++DV AI  A
Sbjct: 225 QPTVKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDVVAI--A 282

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G Y T  +  DG V+++G  E   LG+    +     H+   TP  V  +  V      
Sbjct: 283 AGMYHTVALKNDGTVWAWGDNEHDQLGNETTKE---EYHS---TPVQVKGISDVKAIAAG 336

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            S         +T  L   G ++A+G  + G+LG    NN 
Sbjct: 337 AS---------YTVVLKNDGTVWAWGVNEYGKLGDGTTNNS 368



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 13/220 (5%)

Query: 44  LQGIR-IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           ++GI  ++  AAG   T+ + + G V+A+G +   +        +  ++P  V+ + ++ 
Sbjct: 272 VKGISDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVK 331

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            + A  G  +T VL  +G V+ +      +LG  T  N   P  + G + N+    IAAG
Sbjct: 332 AIAA--GASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNG-ISNVKA--IAAG 386

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + + L    +   V++ G    G+LG+G+  D   P  ++    +      +AAGA H
Sbjct: 387 AYHTVVLKNDGT---VWTWGYNHYGELGNGTTVDSSTPVQVKGISDVK----AIAAGACH 439

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
              +  DG V  WG   YG LG+G     S P  V+  N+
Sbjct: 440 TVALKNDGTVWAWGCNYYGELGNGTAVDSSTPVQVKWQNN 479


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 27/347 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+  + L G+ + Q   G     +++D G+++ +G+  FG   +G +  + + SP+ +E
Sbjct: 261 SPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNR--EGLESPRRIE 318

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L+ I  VQ A G  +TA ++  G +YT+  G + RLG     +   P  + G   +  V
Sbjct: 319 ALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGL--HSKV 376

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN---LQP 213
            ++ AG  +   L  + +   VY+   G     GHG   D   PRLI  F   +   ++ 
Sbjct: 377 KEVYAGSVHSCVLTREGT---VYAF--GKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQ 431

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-----EECESV-----PKVVQALNDV 263
           + V  G +H   +   G+V  WG  R   LG GN        E       P++V++L  +
Sbjct: 432 ISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGM 491

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
             + V  G   +  ++ DG +Y  G      LG  +      N   +          +  
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQ 551

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           + ++ QI+         H+ A+ E+G++++FGAG KGQLG E    +
Sbjct: 552 HLKIKQIACGGE-----HSVAVAENGEVWSFGAGQKGQLGHESTTRE 593



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 48/331 (14%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE   +P    +L+GI  +Q A G   T  ++ +G++Y +G    G    G    +   +
Sbjct: 308 REGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADR--HT 365

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P  VE L +  V +   G+  + VL+REG VY F  G     GH    + ++P  L+ T 
Sbjct: 366 PSRVEGLHSK-VKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPR-LIPTF 421

Query: 152 EN-----IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-----RTDE---- 197
                  +  + +  G  + +AL CQ     VY+ G     +LG G+     R  E    
Sbjct: 422 SGGSGALVRQISVGPGGYHTMALTCQGQ---VYAWGHNRVAQLGIGNSFTVPRNMEGAYF 478

Query: 198 -KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK- 255
              P+L+E    +N+  V V AG  H+A +  DG++   G    G LG G+ +    P+ 
Sbjct: 479 LPSPQLVESLVGMNI--VKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQ--GFPQN 534

Query: 256 -----------VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
                      ++  L  +K   +A G   +  V+E+G+V+SFG G+   LGH +     
Sbjct: 535 ERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTRED 594

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
                    P+LV +LK     ++ ++  N+
Sbjct: 595 --------FPRLVQALKSTRREIMHVACGNN 617



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 37/259 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSF-GEAEYGVQGTKLVTSPQLVESLKN---IFV 103
           ++ +  AG+  + +++  G VYAFGK  + G  ++     + V  P+L+ +        V
Sbjct: 375 KVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDH-----EDVLDPRLIPTFSGGSGALV 429

Query: 104 VQAAIG--NFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVE-----PHP-LLGTLE 152
            Q ++G   + T  L+ +G+VY +     A+LG     T P ++E     P P L+ +L 
Sbjct: 430 RQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLV 489

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-----RTDEKHPR-----L 202
            + +V++ AG+ +  AL        +Y  G    G+LG GS     + +  HP      L
Sbjct: 490 GMNIVKVVAGWGHSAALTVDGQ---LYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCL 546

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           I++ Q L ++ +  A G  H+  V ++G V ++G G+ G LGH +   E  P++VQAL  
Sbjct: 547 IDRLQHLKIKQI--ACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604

Query: 263 VKA--IHVATGDYTTFVVS 279
            +   +HVA G+  T V++
Sbjct: 605 TRREIMHVACGNNCTLVLA 623


>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
          Length = 410

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 24/203 (11%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
            +Y+ G G  G LGHGS  D K  +P+L+E F+  N + V V  G +H A +  DG V T
Sbjct: 72  KLYTFGSGNWGPLGHGSEKDVKFDNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYT 131

Query: 235 WGWG------------RYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSE 280
           WG+G              G LGHG+++    PK V     N++K   +  G Y T  +S+
Sbjct: 132 WGYGGKQTLFNWMITQEVGGLGHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISD 191

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            GD+Y++G G    LG+ +        ++  LTP L      + +    + +      + 
Sbjct: 192 TGDLYTWGRGLFGVLGNAS--------NSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADE 243

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           +T AL   G LY +G  D+GQLG
Sbjct: 244 YTGALMNDGTLYVWGKNDRGQLG 266



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 27/228 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           PQ +E+   + V +  IG   +AV++ +G++YTF  GN   LGH +E +    +P L   
Sbjct: 43  PQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVEF 102

Query: 152 ---ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG-------------LGGKLGHGSRT 195
               N  +V++  G  +  AL    S   VY+ G G             +GG LGHG + 
Sbjct: 103 FEKRNKKIVEVGLGEYHTAALT---SDGEVYTWGYGGKQTLFNWMITQEVGG-LGHGDKK 158

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
               P+ ++ F+  N++   + AG +H   +   G + TWG G +G LG+ +      P 
Sbjct: 159 HHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSYSLTPM 218

Query: 256 -------VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
                  + Q   D+K   +   D  T  +  DG +Y +G  +   LG
Sbjct: 219 LNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGKNDRGQLG 266



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 11/112 (9%)

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           + +P+ ++A + +    +  G   + V++EDG +Y+FG G    LGH +  D        
Sbjct: 40  KGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKD------VK 93

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
              PQLV   ++ N+++V++ L        HT ALT  G++Y +G G K  L
Sbjct: 94  FDNPQLVEFFEKRNKKIVEVGLG-----EYHTAALTSDGEVYTWGYGGKQTL 140


>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
          Length = 426

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 36/264 (13%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+ AA G   T+ ++D       G++  G+  +G   TK V +P+L+E L N  +V AA 
Sbjct: 62  IVSAACGRNHTLALTD------LGRNEKGQLGHG--DTKRVEAPKLIEVLSNEVIVSAAC 113

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   T  L+  G V+ F      +LG   +  D  P P        P+ ++A G  + + 
Sbjct: 114 GRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPSPAQIMYNGQPITKMACGAEFSMI 172

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTD------------EKHPRLIEQF-------QLL 209
           + C+ +   +YS GC   G+LGH S               E  PR +  F       Q+L
Sbjct: 173 MDCKGN---LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQIL 229

Query: 210 NLQPVVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVK 264
            +  VVV   A G  H  V+    RV +WG+G YG LGH  ++ E VP++V+  +     
Sbjct: 230 PVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRG 289

Query: 265 AIHVATGDYTTFVVSEDGDVYSFG 288
           A H+  G   +F VSE G ++ +G
Sbjct: 290 AAHIYAGYTCSFAVSEIGGLFFWG 313



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 22/238 (9%)

Query: 136 HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
           H +   VE   L+  L N  +V  A G  + LAL           +G    G+LGHG   
Sbjct: 42  HGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALT---------DLGRNEKGQLGHGDTK 92

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
             + P+LIE   L N   V  A G  H   + + G V  +G  + G LG GN+  +++P 
Sbjct: 93  RVEAPKLIEV--LSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAIPS 149

Query: 256 VVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHAN 310
             Q + + + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +  
Sbjct: 150 PAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC 209

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
            L P+ V    +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 210 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLG 267



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 132/312 (42%), Gaps = 55/312 (17%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
            G++  G+  +G   TK V +P+L+E L N  +V AA G   T  L+  GR         
Sbjct: 32  LGRNEKGQLGHG--DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTDLGR------NEK 83

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LGH  +   VE   L+  L N  +V  A G  + LAL    S   V++ G    G+LG
Sbjct: 84  GQLGH-GDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGS---VFAFGENKMGQLG 139

Query: 191 HGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
            G++TD    P  I    + N QP+  +A GA  + ++   G + ++G   YG LGH ++
Sbjct: 140 LGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 195

Query: 249 ------------ECESVPKVVQ------------ALNDVKAIHVATGDYTTFVVSEDGDV 284
                       +CE VP+ V              + +V    VA G   T V+     V
Sbjct: 196 GKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRV 255

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +S+G G    LGH    D         + P+LV            I    +      +FA
Sbjct: 256 FSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAAHIYAGYTC-----SFA 302

Query: 345 LTESGKLYAFGA 356
           ++E G L+ +GA
Sbjct: 303 VSEIGGLFFWGA 314



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGHG     + P+LIE   L N   V  A G  H   +   GR         G LGHG
Sbjct: 38  GQLGHGDTKRVEAPKLIEV--LSNEVIVSAACGRNHTLALTDLGR------NEKGQLGHG 89

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           + +    PK+++ L++   +  A G   T  ++E G V++FG  +   L       G GN
Sbjct: 90  DTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQL-------GLGN 142

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +   + +P  +    Q         +T        +  +   G LY+FG  + GQLG
Sbjct: 143 QTDAIPSPAQIMYNGQ--------PITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 191



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 45/282 (15%)

Query: 30  LGREVNGTPLYCRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG + +  P   + +  G  I + A GA  +M++   G +Y+FG   +G+  +   G K 
Sbjct: 140 LGNQTDAIPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG-KF 198

Query: 89  VTSPQLVE-----------------------SLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           +   Q +E                        + N+ V   A G   T VL  + RV+++
Sbjct: 199 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSW 258

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVG 182
            +G   RLGH  + +++ P   L  L + P      I AGY       C     AV  +G
Sbjct: 259 GFGGYGRLGHAEQKDEMVPR--LVKLFDFPGRGAAHIYAGY------TCS---FAVSEIG 307

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYG 241
                   + SR    +P+ ++      ++ +        + +V  D    +WG    +G
Sbjct: 308 GLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKS---SIIVAADESTISWGPSPTFG 364

Query: 242 CLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 281
            LG+G+ + +S    + V+ L+ +    VA G   + V++ D
Sbjct: 365 ELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARD 406



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G    G LGHG+ +    PK+++ L++   +  A G   T  +++       G  E   L
Sbjct: 33  GRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGRNEKGQL 86

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH     G   R   V  P+L+  L   NE +V  +   +     HT ALTE+G ++AFG
Sbjct: 87  GH-----GDTKR---VEAPKLIEVLS--NEVIVSAACGRN-----HTLALTETGSVFAFG 131

Query: 356 AGDKGQLGIELVNNQTE 372
               GQLG+    NQT+
Sbjct: 132 ENKMGQLGL---GNQTD 145


>gi|348676752|gb|EGZ16569.1| hypothetical protein PHYSODRAFT_498697 [Phytophthora sojae]
          Length = 664

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 41/327 (12%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
           T    D G VY FGK  + +  Y +    +  +P+LVE      +VQ +   + T  L+ 
Sbjct: 147 TTEACDGGLVYTFGKRDY-QLGYHLPNADVQVTPRLVELPAASPIVQLSASKYHTIALNA 205

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
            G  + + +G   RLG   E + +EP  L+ +LE  P+ ++AAG  + LAL+   SG  V
Sbjct: 206 AGECFVWGFGKGGRLGTGNEFDRIEPTRLV-SLETTPMKKVAAGENHTLALS--RSGQ-V 261

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRL----IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           +S G    G+LGH  ++     RL    ++ F+   ++  + A+G   AA+  +DG V T
Sbjct: 262 FSWGSNSFGQLGHPGKSSSSQSRLTPKRVDAFRFHEMKD-IAASGCHSAAIDAEDGAVYT 320

Query: 235 WGWGRYGCLGH----GNEECESVPKVVQAL-------------NDVKAIHVATGDYTTFV 277
           WG  R G LG     G ++ ++ P+ V AL             + V+A  +A  D+ T V
Sbjct: 321 WGSNRRGQLGRKEGCGTDQADATPRSVDALRPRHPMCVVYGDYDSVQAEKLALSDWHTCV 380

Query: 278 V-------SEDGDVYSFGCGESASLGHNAIAD--GQGNRHANVLTPQLVTSLKQVNERVV 328
           V          G V+ FG G       N   D    G+    ++    V + KQ    VV
Sbjct: 381 VLRCSHNGRSLGQVWQFGYGSYRPSRVNIPFDAAASGSGAGAIMCDAWVPTCKQRGMDVV 440

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFG 355
            +S   +     H+ AL+ SG ++ +G
Sbjct: 441 DVSCAQN-----HSIALSASGAVFTWG 462



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           PRL+E   L    P+V ++A  +H   +   G    WG+G+ G LG GNE     P  + 
Sbjct: 179 PRLVE---LPAASPIVQLSASKYHTIALNAAGECFVWGFGKGGRLGTGNEFDRIEPTRLV 235

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           +L       VA G+  T  +S  G V+S+G      LGH     G+ +   + LTP+ V 
Sbjct: 236 SLETTPMKKVAAGENHTLALSRSGQVFSWGSNSFGQLGH----PGKSSSSQSRLTPKRVD 291

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + +    + +  S  +S   +A      E G +Y +G+  +GQLG
Sbjct: 292 AFRFHEMKDIAASGCHSAAIDA------EDGAVYTWGSNRRGQLG 330



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 162/402 (40%), Gaps = 62/402 (15%)

Query: 25  GKRN------LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           GKR+      L   +V  TP          I+Q +A    T+ ++ AG+ + +G    G 
Sbjct: 160 GKRDYQLGYHLPNADVQVTPRLVELPAASPIVQLSASKYHTIALNAAGECFVWGFGKGGR 219

Query: 79  AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHH 136
              G +  ++   P  + SL+   + + A G   T  LSR G+V  FSWG+++  +LGH 
Sbjct: 220 LGTGNEFDRI--EPTRLVSLETTPMKKVAAGENHTLALSRSGQV--FSWGSNSFGQLGHP 275

Query: 137 TEPNDVEPHPLLGTLENI---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH-- 191
            + +  +       ++      +  IAA  C+  A+  +    AVY+ G    G+LG   
Sbjct: 276 GKSSSSQSRLTPKRVDAFRFHEMKDIAASGCHSAAIDAEDG--AVYTWGSNRRGQLGRKE 333

Query: 192 GSRTDE-------------KHPRLIEQFQLLNLQPVVVAAGAWHAAVV---GQDGR---- 231
           G  TD+             +HP  +      ++Q   +A   WH  VV     +GR    
Sbjct: 334 GCGTDQADATPRSVDALRPRHPMCVVYGDYDSVQAEKLALSDWHTCVVLRCSHNGRSLGQ 393

Query: 232 VCTWGWGRY-------------GCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFV 277
           V  +G+G Y                G G   C++ VP   Q   DV  + V+     +  
Sbjct: 394 VWQFGYGSYRPSRVNIPFDAAASGSGAGAIMCDAWVPTCKQRGMDV--VDVSCAQNHSIA 451

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +S  G V+++G    A L H   A   G+  +  L+P    S  Q  E      + +   
Sbjct: 452 LSASGAVFTWGHNVPA-LSHQPSAGTPGHNASTTLSP----SAPQKVELTKAGPVASVCA 506

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              H   +T  G L  +G G +G LG    N  T + +P+RV
Sbjct: 507 SQDHCAVVTREGDLVTWGCGQQGVLGHGRGN--TWQPSPKRV 546



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 109/284 (38%), Gaps = 77/284 (27%)

Query: 52  AAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLK---------- 99
           AA+G     + ++ G VY +G +  G+   + G    +   +P+ V++L+          
Sbjct: 302 AASGCHSAAIDAEDGAVYTWGSNRRGQLGRKEGCGTDQADATPRSVDALRPRHPMCVVYG 361

Query: 100 NIFVVQA---AIGNFFTAVLSR-------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           +   VQA   A+ ++ T V+ R        G+V+ F +G+         P+ V       
Sbjct: 362 DYDSVQAEKLALSDWHTCVVLRCSHNGRSLGQVWQFGYGS-------YRPSRV------- 407

Query: 150 TLENIPVVQIAAG------YCYLLALACQPSGMAVYSVGCGL------------------ 185
              NIP    A+G       C      C+  GM V  V C                    
Sbjct: 408 ---NIPFDAAASGSGAGAIMCDAWVPTCKQRGMDVVDVSCAQNHSIALSASGAVFTWGHN 464

Query: 186 ---------GGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTW 235
                     G  GH + T    P   ++ +L    PV  V A   H AVV ++G + TW
Sbjct: 465 VPALSHQPSAGTPGHNASTTLS-PSAPQKVELTKAGPVASVCASQDHCAVVTREGDLVTW 523

Query: 236 GWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G G+ G LGHG     +  PK V  +   KA+ VA G   T V+
Sbjct: 524 GCGQQGVLGHGRGNTWQPSPKRVSGVK--KAVAVAAGHQHTAVL 565


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 19/290 (6%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +V+ FG+   G+   G   T+ V  P+LV+ LK+  VV  A G   TA ++ +G +Y   
Sbjct: 1   EVWVFGRGDMGQ--LGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
              +++LG     + + P  +   LE   V ++A G  + LA+     G AV + G    
Sbjct: 59  SNEESQLGVRQRSDALAPTRVT-ALEQFQVQRVACGPAHTLAVV---DGGAVAAFGSAEY 114

Query: 187 GKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G++G G      + PR+++  + +++  V VAAG  H   +   G V + G G +G LG 
Sbjct: 115 GQVGLGPCGARVELPRVVKDLRSMHI--VRVAAGGSHTLALSSTGGVFSCGNGSFGALGR 172

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G  E   VP+ +  L  +  + +A G+  +  ++ DG V ++G G+   L   A   G G
Sbjct: 173 GTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLL--PAFHCGHG 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           +   N  TP+ V +LK +  R  Q+S  +      HT  LTE G +YA+G
Sbjct: 231 D-FENCSTPKPVQALKGIVGR--QVSCGDD-----HTVLLTEDGSVYAWG 272



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 16/206 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+  ++ + A G   T+ + D G V AFG   +G+   G  G + V  P++V+ 
Sbjct: 76  PTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGAR-VELPRVVKD 134

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPV 156
           L+++ +V+ A G   T  LS  G V++   G+   LG   TE NDV P P +  L  + V
Sbjct: 135 LRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDV-PRP-ISRLWPLGV 192

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL-----GHGSRTDEKHPRLIEQFQ-LLN 210
           VQIA G  +  A+        V + G G    L     GHG   +   P+ ++  + ++ 
Sbjct: 193 VQIACGENHSAAITADGR---VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVG 249

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWG 236
            Q   V+ G  H  ++ +DG V  WG
Sbjct: 250 RQ---VSCGDDHTVLLTEDGSVYAWG 272



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V  +G G  G LG G+ E   VP++V+ L     +++A G   T  V+ DG++Y  G  E
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            + LG          + ++ L P  VT+L+Q   + V           AHT A+ + G +
Sbjct: 62  ESQLGVR--------QRSDALAPTRVTALEQFQVQRVACG-------PAHTLAVVDGGAV 106

Query: 352 YAFGAGDKGQLGI 364
            AFG+ + GQ+G+
Sbjct: 107 AAFGSAEYGQVGL 119



 Score = 37.7 bits (86), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 18/97 (18%)

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           +V+ FG G+   LG  +  D        V  P+LV  LK  +       + N      HT
Sbjct: 1   EVWVFGRGDMGQLGDGSTED--------VFVPRLVKGLKSRD-------VVNLAAGALHT 45

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            A+T  G+LY  G+ ++ QLG   V  +++   P RV
Sbjct: 46  AAVTSDGELYVMGSNEESQLG---VRQRSDALAPTRV 79


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 162/355 (45%), Gaps = 42/355 (11%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           ++   TP    +     I   + G+  +  +++ G VY +G+ S         G      
Sbjct: 562 KDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDD 621

Query: 92  ---PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
              PQ VESL+ I V+  +IG + +A +   G + T+  G D +LGH     DV   P+ 
Sbjct: 622 QLLPQKVESLQEIVVI--SIGFYHSAAVKSNGELLTWGCGEDGQLGH----GDVFNQPIP 675

Query: 149 GTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +++I    V Q+  G  + +   C      V++ G    G+LG G       P L+  
Sbjct: 676 KVVQSITSHWVTQVQCGEKHTI---CLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTS 732

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
               ++  + +A GA H AV+  +  V  +G G    +G  N    S+P +V +L  +  
Sbjct: 733 LDKYHI--IQIACGATHNAVLTNNREVLVFGNG--AAMGSAN--IISIPIMVPSLKIMNI 786

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
             ++ G Y+T  ++E GDVY++G G+   LGH     G G   A+   P+LV +L+  N+
Sbjct: 787 ERLSCGHYSTAALTECGDVYTWGSGQE--LGH-----GHGTSEAH---PKLVETLR--NQ 834

Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            + QIS         H   LT+SGK+Y  G    GQLG    +   ++  P+++D
Sbjct: 835 SIRQISCGGR-----HMAFLTDSGKIYTSGKDPFGQLG----HAAGDQNRPKKID 880



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 28/240 (11%)

Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
            +WG+ +  +LG  +   D +P P    L N  +  I +  C     A       VY  G
Sbjct: 545 MTWGSGSYCKLGFKSVEKDSQPTP--ERLPNFNISDICSISCGSYYSAALTENGDVYMWG 602

Query: 183 CGLG-----GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
            G         LG+G+  D+  P+ +E  Q +    VV++ G +H+A V  +G + TWG 
Sbjct: 603 RGSVKNPPIATLGNGTFDDQLLPQKVESLQEI----VVISIGFYHSAAVKSNGELLTWGC 658

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G  G LGHG+   + +PKVVQ++       V  G+  T  ++++G V+++G  E   LG 
Sbjct: 659 GEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLG- 717

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
             + D Q N      TP LVTSL + +  ++QI+   +     H   LT + ++  FG G
Sbjct: 718 --LGDTQKN-----CTPMLVTSLDKYH--IIQIACGAT-----HNAVLTNNREVLVFGNG 763



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 24/189 (12%)

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR- 239
           G G   KLG  S   +  P   E+    N+  +  ++ G++++A + ++G V  WG G  
Sbjct: 548 GSGSYCKLGFKSVEKDSQPT-PERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606

Query: 240 ----YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
                  LG+G  + + +P+ V++L ++  I +  G Y +  V  +G++ ++GCGE   L
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQEIVVISI--GFYHSAAVKSNGELLTWGCGEDGQL 664

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH  + +    +    +T   VT + Q  E+              HT  LT++GK++ +G
Sbjct: 665 GHGDVFNQPIPKVVQSITSHWVTQV-QCGEK--------------HTICLTKNGKVFTWG 709

Query: 356 AGDKGQLGI 364
             + GQLG+
Sbjct: 710 TSEYGQLGL 718



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 15/207 (7%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L   + N TP+   SL    IIQ A GA    ++++  +V  FG  +       + 
Sbjct: 714 GQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGA------AMG 767

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
              +++ P +V SLK + + + + G++ TA L+  G VYT  WG+   LGH    ++  P
Sbjct: 768 SANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYT--WGSGQELGHGHGTSEAHP 825

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             L+ TL N  + QI+ G  ++  L    SG  +Y+ G    G+LGH +  D+  P+ I+
Sbjct: 826 K-LVETLRNQSIRQISCGGRHMAFLT--DSG-KIYTSGKDPFGQLGHAA-GDQNRPKKID 880

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGR 231
              LL    + ++ G  H A +    R
Sbjct: 881 --SLLKTTFMSISCGENHNAALFDTTR 905



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 14/141 (9%)

Query: 232 VCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           + TWG G Y  LG  + E +S   P+ +   N      ++ G Y +  ++E+GDVY +G 
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGR 603

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G   S+ +  IA        + L PQ V SL+++    V IS+    Y   H+ A+  +G
Sbjct: 604 G---SVKNPPIATLGNGTFDDQLLPQKVESLQEI----VVISI--GFY---HSAAVKSNG 651

Query: 350 KLYAFGAGDKGQLGIELVNNQ 370
           +L  +G G+ GQLG   V NQ
Sbjct: 652 ELLTWGCGEDGQLGHGDVFNQ 672


>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
 gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   +AG   T+ +SD GQV+ +G    G+   G +  ++V+SP  +  +++     
Sbjct: 233 GVRITSVSAGGRHTLALSDMGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSSFGK 291

Query: 102 -----------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                                  +V   A G   +A ++  G + TF WG   + G    
Sbjct: 292 DRSAALARGSASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLYGQCGQGCT 351

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P   + +L  I +  +AAG   L    C  S   +YS G    G+LG G+   E 
Sbjct: 352 DDELSPT-CVSSLLGIRIESVAAG---LWHTVCISSDGDIYSFGGNQFGQLGTGADQAET 407

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   + N+   VV+ GA H+A+V +DG+V  WGW +YG LG G+    ++P  V 
Sbjct: 408 LPRLLDAPSVENVNAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIPVEV- 466

Query: 259 ALNDVKAIHVATGDYTTFVVSE 280
            + +  + +VA G + T +++E
Sbjct: 467 PMENCNSKNVACGWWHTLLLAE 488



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 51/281 (18%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHP 146
           L   P LV     + +   + G   T  LS  G+V+ + +G + +LG  +    V  PHP
Sbjct: 221 LSAVPCLVTLNPGVRITSVSAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHP 280

Query: 147 LLGTLENIPVVQIAA-GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
                  IP ++ ++ G     ALA   + +             G GSR    + + I  
Sbjct: 281 -------IPCIESSSFGKDRSAALARGSASLE------------GQGSRIPGSYVKGI-- 319

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
                      A G  H+A V   G + T+GWG YG  G G  + E  P  V +L  ++ 
Sbjct: 320 -----------ACGGRHSAAVTDAGALLTFGWGLYGQCGQGCTDDELSPTCVSSLLGIRI 368

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT--SLKQV 323
             VA G + T  +S DGD+YSFG  +   L       G G   A  L P+L+   S++ V
Sbjct: 369 ESVAAGLWHTVCISSDGDIYSFGGNQFGQL-------GTGADQAETL-PRLLDAPSVENV 420

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           N +VV            H+  ++E GK++ +G    GQLG+
Sbjct: 421 NAKVVSCGAR-------HSAIVSEDGKVFCWGWNKYGQLGL 454



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 10/142 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GIRI   AAG   T+ IS  G +Y+FG + FG  + G    +  T P+L++
Sbjct: 356 SPTCVSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFG--QLGTGADQAETLPRLLD 413

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLE 152
             S++N+     + G   +A++S +G+V+ + W    +LG      DV     P+   +E
Sbjct: 414 APSVENVNAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGL----GDVIDRNIPVEVPME 469

Query: 153 NIPVVQIAAGYCYLLALACQPS 174
           N     +A G+ + L LA  P+
Sbjct: 470 NCNSKNVACGWWHTLLLAESPT 491


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 22/283 (7%)

Query: 18  DIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           D  N + G     GR+   TP   + L    + Q +AG   ++ ++D G+V+A+G +S G
Sbjct: 96  DNTNGQLGDGTTTGRQ---TPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSG 150

Query: 78  EAEYGVQGTKLVTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RL 133
           +   G   T    +P  V+ L   +   V AA GN   A L+ +GRV  F+WG ++  +L
Sbjct: 151 QLGDGT--TADSRTPVQVQGLATDSTIKVVAAGGNHSLA-LTSDGRV--FAWGKNSSGQL 205

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           G+++  +   P  + G   N  V  +AAG  + LAL    S   +Y+ G    G+LG G+
Sbjct: 206 GNNSTVDSSIPVQVQGLPAN--VTAVAAGGNHSLALT---SDGRIYAWGLNSSGQLGDGT 260

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
            ++   P L+        +PV V+AG  H+  + QDG V  WG   YG LG+G      +
Sbjct: 261 TSNSSTPVLVAGLPA-GSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEM 319

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
           P  V  L +V A+     D  +  ++ DG VY++G   S  LG
Sbjct: 320 PVQVTGLANVTAVSAGGSD--SLALTSDGYVYAWGLNSSGQLG 360



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 31/343 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PLY  S   +     +AG   +++++    V+A+G ++ G+   G    +   +P   + 
Sbjct: 61  PLYPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTP--AQG 118

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L +  V Q + G   +  L+ +GRV+ +   +  +LG  T  +   P  + G   +  + 
Sbjct: 119 LPS--VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +AAG  + LAL    S   V++ G    G+LG+ S  D   P    Q Q L      VA
Sbjct: 177 VVAAGGNHSLALT---SDGRVFAWGKNSSGQLGNNSTVDSSIPV---QVQGLPANVTAVA 230

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTF 276
           AG  H+  +  DGR+  WG    G LG G     S P +V  L    K + V+ G   + 
Sbjct: 231 AGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSL 290

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            + +DG VY++G      LG+       G   A+ + P  VT L  V      +S   S 
Sbjct: 291 ALMQDGTVYAWGGNSYGQLGN-------GTTTASEM-PVQVTGLANVTA----VSAGGS- 337

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                + ALT  G +YA+G    GQLG    +N   R  P RV
Sbjct: 338 ----DSLALTSDGYVYAWGLNSSGQLGDGTTSN---RNTPVRV 373


>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1264

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 103/396 (26%), Positives = 166/396 (41%), Gaps = 61/396 (15%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            NGK   LG E      + + +  I+  Q + G   +  IS+ GQ+  +G+ + G+  +  
Sbjct: 867  NGKDGRLGIEGEKPFKFPQIIPNIQACQVSLGYHHSACISNQGQILTWGRGNRGQLGHSS 926

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
                L+ +P  V     + +V    G   T  LS +GRV+++ +G D +LG     +   
Sbjct: 927  FENCLLPTP--VNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLGDYQSQNS 984

Query: 144  PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            P   + +LE   V QI AG+ +   +  +   M     GC +  +L + +  ++  P  I
Sbjct: 985  PQ-FINSLEGYFVTQINAGHSHSSVITSEGIFMMF---GCNIDHRLMNKTNQNQFLP-CI 1039

Query: 204  EQFQLL------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             + + L      +   V  + G  H+AV+ ++G + T G G  G LG    E      ++
Sbjct: 1040 TELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEGQLGSFISEDTPNSLMI 1099

Query: 258  QA---------------------------LNDV-------KAIHVATGDYTTFVVSEDGD 283
            Q                             N V       KAI V+ GD  T V++E   
Sbjct: 1100 QKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKNKAIQVSCGDSFTLVINEQSQ 1159

Query: 284  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            VYSFG G    LGH  I   Q     NV  P+L+ SLK  N ++  +S         H  
Sbjct: 1160 VYSFGKGSYYRLGHLDIQTNQ-----NVYEPKLIESLK--NFKITSVSTGCR-----HAV 1207

Query: 344  ALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            A+T  GK+Y +G     QLG  L +++ +   P +V
Sbjct: 1208 AITNDGKVYTWGFNFYDQLG--LGDSEKDYQQPTKV 1241



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)

Query: 120  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            G +Y +  G D RLG   E    +P      + NI   Q++ GY +    AC  +   + 
Sbjct: 860  GIIYIWGNGKDGRLGIEGE----KPFKFPQIIPNIQACQVSLGYHHS---ACISNQGQIL 912

Query: 180  SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
            + G G  G+LGH S  +   P  +  F  +++  V V  G  H   +  DGRV +WG+G 
Sbjct: 913  TWGRGNRGQLGHSSFENCLLPTPVNFFSKMSI--VSVGCGWQHTLALSNDGRVFSWGFGE 970

Query: 240  YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
             G LG G+ + ++ P+ + +L       +  G   + V++ +G    FGC    ++ H  
Sbjct: 971  DGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGC----NIDHRL 1026

Query: 300  IADGQGNRHANVLTP-QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            +     N+    +T  + +      +   V+ SL  +     H+  +T++G LY  G G+
Sbjct: 1027 MNKTNQNQFLPCITELEFLRQEYGSDYNAVKASLGVN-----HSAVITKNGNLYTSGLGN 1081

Query: 359  KGQLG 363
            +GQLG
Sbjct: 1082 EGQLG 1086



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 149/337 (44%), Gaps = 48/337 (14%)

Query: 66   GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
            G +Y +G    G    G++G K    PQ++    NI   Q ++G   +A +S +G++ T+
Sbjct: 860  GIIYIWGNGKDGR--LGIEGEKPFKFPQII---PNIQACQVSLGYHHSACISNQGQILTW 914

Query: 126  SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
              GN  +LGH +  N + P P +     + +V +  G+ + LAL+   +   V+S G G 
Sbjct: 915  GRGNRGQLGHSSFENCLLPTP-VNFFSKMSIVSVGCGWQHTLALS---NDGRVFSWGFGE 970

Query: 186  GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
             G+LG G    +  P+ I   +   +    + AG  H++V+  +G    +G      L +
Sbjct: 971  DGQLGLGDYQSQNSPQFINSLEGYFVTQ--INAGHSHSSVITSEGIFMMFGCNIDHRLMN 1028

Query: 246  GNEECESVPKVVQAL-------NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
               + + +P + +         +D  A+  + G   + V++++G++Y+ G G    LG  
Sbjct: 1029 KTNQNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEGQLGSF 1088

Query: 299  AIADGQGN----RHANVLTP---------------QLVTSLKQVN-----ERVVQISLTN 334
               D   +    +++N ++                  +    +VN      + +Q+S  +
Sbjct: 1089 ISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKNKAIQVSCGD 1148

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG-IELVNNQ 370
            S      T  + E  ++Y+FG G   +LG +++  NQ
Sbjct: 1149 SF-----TLVINEQSQVYSFGKGSYYRLGHLDIQTNQ 1180



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 59/322 (18%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQ 105
            + I+    G   T+ +S+ G+V+++G   FGE  + G+   +   SPQ + SL+  FV Q
Sbjct: 942  MSIVSVGCGWQHTLALSNDGRVFSWG---FGEDGQLGLGDYQSQNSPQFINSLEGYFVTQ 998

Query: 106  AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
               G+  ++V++ EG    F    D RL + T  N   P      +  +  ++   G  Y
Sbjct: 999  INAGHSHSSVITSEGIFMMFGCNIDHRLMNKTNQNQFLP-----CITELEFLRQEYGSDY 1053

Query: 166  ---LLALACQPSGMA-----VYSVGCGLGGKLGHGSRTDEKHPRLIEQ------------ 205
                 +L    S +      +Y+ G G  G+LG     D  +  +I++            
Sbjct: 1054 NAVKASLGVNHSAVITKNGNLYTSGLGNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFE 1113

Query: 206  ---------------FQLLNL-----QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
                           F  +N      + + V+ G     V+ +  +V ++G G Y  LGH
Sbjct: 1114 EEQQENQDQFDRICYFNKVNFFNKKNKAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGH 1173

Query: 246  GNEECES---VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
             + +       PK++++L + K   V+TG      ++ DG VY++G      L       
Sbjct: 1174 LDIQTNQNVYEPKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQL------- 1226

Query: 303  GQGNRHANVLTPQLVTSLKQVN 324
            G G+   +   P  VT L  +N
Sbjct: 1227 GLGDSEKDYQQPTKVTKLSGLN 1248



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 51/299 (17%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            +G+  L   +   +P +  SL+G  + Q  AG   + +I+  G    FG +         
Sbjct: 971  DGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRLMNKT 1030

Query: 84   QGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
               + +     +E L+  +      V+A++G   +AV+++ G +YT   GN+ +LG    
Sbjct: 1031 NQNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEGQLGSFIS 1090

Query: 139  PNDVEPHPLL----------------------GTLENI-------------PVVQIAAGY 163
             +   P+ L+                         + I               +Q++ G 
Sbjct: 1091 ED--TPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKNKAIQVSCGD 1148

Query: 164  CYLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
             + L +  Q     VYS G G   +LGH    +  +   P+LIE  +  N +   V+ G 
Sbjct: 1149 SFTLVINEQSQ---VYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLK--NFKITSVSTGC 1203

Query: 221  WHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVV 278
             HA  +  DG+V TWG+  Y  LG G+ E +   P  V  L+ +     + G + T V+
Sbjct: 1204 RHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCGYFHTSVL 1262



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 18/136 (13%)

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           +G +  WG G+ G LG   E+    P+++    +++A  V+ G + +  +S  G + ++G
Sbjct: 859 NGIIYIWGNGKDGRLGIEGEKPFKFPQIIP---NIQACQVSLGYHHSACISNQGQILTWG 915

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G    LGH++          N L P  V    +++  +V +       W  HT AL+  
Sbjct: 916 RGNRGQLGHSSF--------ENCLLPTPVNFFSKMS--IVSVGCG----WQ-HTLALSND 960

Query: 349 GKLYAFGAGDKGQLGI 364
           G+++++G G+ GQLG+
Sbjct: 961 GRVFSWGFGEDGQLGL 976


>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
 gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 151/337 (44%), Gaps = 49/337 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            +I +AAG   ++++   G V+A+G +  G  + G    +    P LV+ L    V + A
Sbjct: 31  NVISSAAGGSHSLILRSDGTVWAWGNN--GNGQLGDGTFEQRNEPVLVKGLTG--VTKIA 86

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHT--EPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G+  +  L  +G V+ + W    +LG++T    N  +P   +G  +   V+ IAAG  +
Sbjct: 87  AGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTD---VIDIAAGDAH 143

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            LAL    +   V+  G                   L  + + L     + AAGA H   
Sbjct: 144 GLALKKDGT---VWIWGS--------------NSTNLPTRVESLTDVRAIAAAGA-HNLT 185

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG V +WGW  YG LG  N   + VP  V  L+++  + VA G + +  +  +G VY
Sbjct: 186 VKKDGTVWSWGWNGYGQLGINNTGSKDVPTKVSNLSNI--VSVAAGFHHSLALDVEGKVY 243

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G      +G          R+A V  P LV         +V+I+  +  Y   HT AL
Sbjct: 244 AWGGNTYGQVGDGTTTQ----RNAPVEVPSLV--------DIVEIASGSYSY---HTLAL 288

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVDI 381
            + G +YA+G G  GQLG    N  T   N P +V+I
Sbjct: 289 KKDGTVYAWGLGTSGQLG----NGTTTNSNIPIQVNI 321


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 22/215 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G        P+L+E    +
Sbjct: 44  LQEKSIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGV 100

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G + +WG    G LG G+ + E  P +V+AL+  K   +A
Sbjct: 101 PL--VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLA 158

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T +++EDG V++FG G+   LGHN+          N L P+LVT L  +  RV Q
Sbjct: 159 CGGSHTALLTEDGQVFTFGAGKHGQLGHNST--------QNELRPRLVTELTGI--RVTQ 208

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           ++         HT A +++ GK+++FG+G +GQLG
Sbjct: 209 VACGRR-----HTLAYVSDLGKVFSFGSGKEGQLG 238



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ ++Q +AG   +M +S +G +Y++G++  G+   G+  T     P LVE
Sbjct: 90  TPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQ--LGLGHTDGEEFPSLVE 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L +  V   A G   TA+L+ +G+V+TF  G   +LGH++  N++ P  L+  L  I V
Sbjct: 148 ALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPR-LVTELTGIRV 206

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            Q+A G  + LA         V+S G G  G+LG+G   ++  P
Sbjct: 207 TQVACGRRHTLAYVSDLG--KVFSFGSGKEGQLGNGGTHNQLIP 248



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 18/217 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G     + T PQLVE L  + +
Sbjct: 44  LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPT-PQLVEHLSGVPL 102

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQ 158
           VQ + G   +  LS  G +Y  SWG +      LGH     D E  P L+  L++  V  
Sbjct: 103 VQISAGKAHSMALSMSGNIY--SWGRNDLGQLGLGH----TDGEEFPSLVEALDSQKVEF 156

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +A G  +   L        V++ G G  G+LGH S  +E  PRL+   +L  ++   VA 
Sbjct: 157 LACGGSHTALLT---EDGQVFTFGAGKHGQLGHNSTQNELRPRLVT--ELTGIRVTQVAC 211

Query: 219 GAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           G  H  A V   G+V ++G G+ G LG+G    + +P
Sbjct: 212 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L   ++   A G   T L+++ GQV+ FG    G+   G   T+    P+LV  
Sbjct: 143 PSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQ--LGHNSTQNELRPRLVTE 200

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L  I V Q A G   T A +S  G+V++F  G + +LG+    N + P P+
Sbjct: 201 LTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 251


>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 416

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 37/297 (12%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +  + +   A  ++LI+  G+++++G
Sbjct: 22  IGRKEVPKQQAAFRNL-GQNLWGPHRYGCLNDVQVSCVVSGPCAAHSLLITAEGKLWSWG 80

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK + +P+L+E L +  VV AA G   T  L+ +G VY+F      +
Sbjct: 81  RNDKGQLGHG--DTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDDGSVYSFGENKLGQ 138

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG  ++   V   P L + +  P+V++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 139 LGQGSQTYAVL-SPALISYDGQPLVKVACGAEFSMVVDCKGN---LYSFGCPEYGQLGHN 194

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S               E  PR I  F       Q++ +  VV+        V+    RV 
Sbjct: 195 SDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVL--------VLDSQKRVF 246

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
           +WG+G YG LGH  ++ E VP++++  +     A  + TG   +F VSE+G ++ +G
Sbjct: 247 SWGFGGYGRLGHAEQKDEMVPRLIKLFDFPGRGASQIYTGYQCSFAVSENGGLFFWG 303



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 14/224 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 44  PH-RYGCLNDVQVSCVVSGPCAAHSLLITAEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 101

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E   L +   V  A G  H   +  DG V ++G  + G LG G++    +   + + +  
Sbjct: 102 EG--LADHLVVAAACGRNHTLALTDDGSVYSFGENKLGQLGQGSQTYAVLSPALISYDGQ 159

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVTS 319
             + VA G   + VV   G++YSFGC E   LGHN+    IA  Q       + P+ +  
Sbjct: 160 PLVKVACGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI 219

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             + ++    + + N +        L    +++++G G  G+LG
Sbjct: 220 FIEKSKDGQVMPVPNVV------LVLDSQKRVFSWGFGGYGRLG 257


>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
 gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
          Length = 472

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 34/263 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   A G   T+ +SD GQ++ +G    G+   G +  K+V+SP L+  L++I    
Sbjct: 213 GVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSR-IKMVSSPHLIPCLESIGSGK 271

Query: 102 ------------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
                                   ++   + G   +A ++  G + TF WG   + GH  
Sbjct: 272 ERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGN 331

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
             + + P   +  ++++ +  +AAG  + +   C  S   VY+ G    G+LG G+   E
Sbjct: 332 TNDQLRPM-AVSEVKSVRMESVAAGLWHTI---CISSDGKVYAFGGNQFGQLGTGTDHAE 387

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             PRL++   L       V+ GA H+AV+ +DG++  WGW +YG LG G+    ++P  V
Sbjct: 388 ILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQV 447

Query: 258 QALNDVKAIHVATGDYTTFVVSE 280
           Q L+  +   VA G + T ++ +
Sbjct: 448 Q-LDGCRLRKVACGWWHTLLLGD 469



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 57/304 (18%)

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
           G    T+P LV     + +   A G   T  LS  G+++ + +G + +LG  +    V  
Sbjct: 198 GDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSS 257

Query: 145 HPLLGTLENI------PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
             L+  LE+I        +    G     A A +  G  + ++ CG  G+          
Sbjct: 258 PHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCG--GR---------- 305

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
                                  H+A +   G + T+GWG YG  GHGN   +  P  V 
Sbjct: 306 -----------------------HSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVS 342

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            +  V+   VA G + T  +S DG VY+FG  +   L       G G  HA +L P+L+ 
Sbjct: 343 EVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQL-------GTGTDHAEIL-PRLLD 394

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
                 +    +S         H+  L E G+L  +G    GQLG+   N   +R  P +
Sbjct: 395 GQNLEGKHAKAVSCGAR-----HSAVLAEDGQLLCWGWNKYGQLGLGDTN---DRNIPTQ 446

Query: 379 VDID 382
           V +D
Sbjct: 447 VQLD 450



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 6/139 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 96
           P+    ++ +R+   AAG   T+ IS  G+VYAFG + FG+   G    +++  P+L++ 
Sbjct: 338 PMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEIL--PRLLDG 395

Query: 97  -SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            +L+       + G   +AVL+ +G++  + W    +LG   + ND    P    L+   
Sbjct: 396 QNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLG-LGDTNDRNI-PTQVQLDGCR 453

Query: 156 VVQIAAGYCYLLALACQPS 174
           + ++A G+ + L L   P+
Sbjct: 454 LRKVACGWWHTLLLGDSPT 472



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 75/189 (39%), Gaps = 53/189 (28%)

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           KH    E F L    PVV A+  W H AVV + G   TWGW          +EC      
Sbjct: 91  KHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGW----------KEC------ 134

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC---------GESASLGHNAI------- 300
           + + + V      +        SE GD+ S G           E+  +G  ++       
Sbjct: 135 IPSKDPVGKQQSGS--------SEQGDIASQGSNAASGTTLQNENQKVGEESVKRRRVST 186

Query: 301 ADGQGNRHAN-----VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           A  +   H +       TP LV+         + + +T+      HT AL++ G+++ +G
Sbjct: 187 AKDETEGHTSGGDFFATTPSLVSV-------GLGVRITSVATGGRHTLALSDLGQIWGWG 239

Query: 356 AGDKGQLGI 364
            G +GQLG+
Sbjct: 240 YGGEGQLGL 248


>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 465

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 19/245 (7%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK------ 99
           GIRI   AAG   T+ +SD G V+A+G    G+   G +  ++V+SPQ +  L       
Sbjct: 201 GIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLGSR-MRIVSSPQQIPCLNLTEKAV 259

Query: 100 --------NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
                      +   A G   +AV++  G + TF WG   ++G  +  +++ P   + T+
Sbjct: 260 ARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGSTEDELSPC-CVSTI 318

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
             + +V IAAG  + L   C      VY+ G    G+LG G    E  PR+I+   L + 
Sbjct: 319 GGLRIVGIAAGLWHTL---CITDVGDVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLEDE 375

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V VA GA H+AV+   G++  WGW +YG LG G+     +P  V   +  +A  +A G
Sbjct: 376 SCVEVACGARHSAVLTGSGKIFAWGWNKYGQLGLGDCNNRDLPVQVTMNDGGRAASIACG 435

Query: 272 DYTTF 276
            + T 
Sbjct: 436 WWHTL 440



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 54/354 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG-------------KDSFGEAEYGVQGTKLVTSPQLV 95
           IIQAA G      ++  G+VY +G             ++S    E  +      TS QL+
Sbjct: 84  IIQAAGGWAHCAAVTGNGEVYTWGWSECVPSVTLNAVEESEQVQEDDIPPDVPGTSLQLL 143

Query: 96  ESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            S  N+   ++  + +     + ++ +V +F  G         + N   P  L+     I
Sbjct: 144 -SRNNVNAARSEPLPSSVVEEVLKKRKVVSFEDGGSPESPTAADENVFSPPFLVNLDAGI 202

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI---EQFQLLNL 211
            +  +AAG  + LAL+       V++ G G  G+LG GSR      R++   +Q   LNL
Sbjct: 203 RIASVAAGGRHTLALS---DVGHVWAWGYGGDGQLGLGSRM-----RIVSSPQQIPCLNL 254

Query: 212 Q---------PV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
                     P+       +A G  H+AVV   G + T+GWG +G +G G+ E E  P  
Sbjct: 255 TEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGSTEDELSPCC 314

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V  +  ++ + +A G + T  +++ GDVY+FG  +   LG           +A  L+P++
Sbjct: 315 VSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGG--------NAAELSPRM 366

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           + +    +E  V+++         H+  LT SGK++A+G    GQLG+   NN+
Sbjct: 367 IDAPLLEDESCVEVACGAR-----HSAVLTGSGKIFAWGWNKYGQLGLGDCNNR 415



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    ++ G+RI+  AAG   T+ I+D G VYAFG + FG  + GV G     SP++++
Sbjct: 311 SPCCVSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFG--QLGVGGNAAELSPRMID 368

Query: 97  S--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           +  L++   V+ A G   +AVL+  G+++ + W    +LG
Sbjct: 369 APLLEDESCVEVACGARHSAVLTGSGKIFAWGWNKYGQLG 408



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 85/216 (39%), Gaps = 49/216 (22%)

Query: 182 GCGLG------GKLGHGSRTDE---------KHPRLIEQFQLLNLQPVVVAAGAW-HAAV 225
           GCG G      GKL     T E         K   + E + L    P++ AAG W H A 
Sbjct: 37  GCGFGIGISESGKLNTWGSTTELGQCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAA 96

Query: 226 VGQDGRVCTWGWGRYGCLG----HGNEECESV------PKV----VQALNDVKAIHVATG 271
           V  +G V TWGW    C+     +  EE E V      P V    +Q L+        + 
Sbjct: 97  VTGNGEVYTWGWSE--CVPSVTLNAVEESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSE 154

Query: 272 DYTTFVVSE---DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
              + VV E      V SF  G S        AD       NV +P  + +L     R+ 
Sbjct: 155 PLPSSVVEEVLKKRKVVSFEDGGSPE--SPTAAD------ENVFSPPFLVNL-DAGIRIA 205

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            ++         HT AL++ G ++A+G G  GQLG+
Sbjct: 206 SVAAGGR-----HTLALSDVGHVWAWGYGGDGQLGL 236


>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
           CCMP2712]
          Length = 312

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 20/321 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G  ++Q AAG   T+ ++DAG+V A G++   +   G +G +    PQ V +L+   V
Sbjct: 3   LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRV 62

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           V+ A G+    V   +G VY++  G+  RLG     +  +P  + G  E    V +AAGY
Sbjct: 63  VEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEE-RCVSVAAGY 121

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            +  A+     G  +++ G G  G+LG G       P  +E+      +   V  G +H+
Sbjct: 122 YHSFAVM---EGGKLFAWGNGTCGQLGTGKFESCCEPVQVEE-PGNGQRWRAVRGGEYHS 177

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +   G + +WG    G LGHG+EE    PK +  L   K    + G      +S    
Sbjct: 178 LGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQ 237

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V+S+G      LGH    +            Q+  +L+  +   + +S++       H  
Sbjct: 238 VFSWGNNRYGQLGHGDKVE------------QIEETLRSGSHGPLVLSVSCG---GRHVL 282

Query: 344 ALTESGKLYAFGAGDKGQLGI 364
            L   G+++A+G  + G LGI
Sbjct: 283 GLDRKGRIWAWGCNESGCLGI 303



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 7/266 (2%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           GRE    P    +L+  R+++ A G    ++    G VY++G  S G    G+   K V 
Sbjct: 44  GREAGPEPQQVSTLRWKRVVEMACGDAHNLVRCLDGSVYSWGLGSSG--RLGLGNFKSVP 101

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            P  V  L     V  A G + +  +   G+++ +  G   +LG     +  EP  +   
Sbjct: 102 QPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEP 161

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
                   +  G  + L +    S   ++S G    G+LGHG       P+ I   +L+ 
Sbjct: 162 GNGQRWRAVRGGEYHSLGMTDVGS---LWSWGLNNDGQLGHGDEERCGRPKGIS--ELVG 216

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +    + G      +    +V +WG  RYG LGHG++  +    +    +    + V+ 
Sbjct: 217 TKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLG 296
           G      +   G ++++GC ES  LG
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLG 302



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 17/213 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R +  AAG   +  + + G+++A+G  + G+   G    +    P  VE   N    +A 
Sbjct: 113 RCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ--LGTGKFESCCEPVQVEEPGNGQRWRAV 170

Query: 108 IGNFFTAV-LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            G  + ++ ++  G ++++   ND +LGH  E     P  +   L    +   + G  + 
Sbjct: 171 RGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGI-SELVGTKISCFSCGPNFN 229

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAA 224
           +A++   +G  V+S G    G+LGHG + ++    + E  +  +  P+V  V+ G  H  
Sbjct: 230 VAIS---NGSQVFSWGNNRYGQLGHGDKVEQ----IEETLRSGSHGPLVLSVSCGGRHVL 282

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            + + GR+  WG    GCLG G    +++P++ 
Sbjct: 283 GLDRKGRIWAWGCNESGCLGIG----DNIPRLA 311


>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 30/259 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G++I   A G   T+ +SD GQV+ +G    G+   G +  K+V+SP L+  +++     
Sbjct: 273 GVKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSR-VKMVSSPHLIPCIESSGKDK 331

Query: 102 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
                               +V+  A G   + V++  G + TF WG   + G     + 
Sbjct: 332 SSAFHQGSGAGAQGSNVTGSYVMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQ 391

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           + P  L+ +L    V +IAAG  + L   C      +Y+ G    G+LG GS   E  PR
Sbjct: 392 LRP-TLVPSLLGTRVEKIAAGLWHTL---CVSVNGQIYAFGGNQFGQLGTGSDQPETSPR 447

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  +  N    +V+ GA H+A++  DG + TWGW +YG LG G+    ++P  V ++ 
Sbjct: 448 QLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIPGQV-SIA 506

Query: 262 DVKAIHVATGDYTTFVVSE 280
             +  +VA G + T ++ +
Sbjct: 507 GCRPRNVACGWWHTLLMGD 525



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 25/232 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP LV     + +   A+G   T  LS  G+V+ + +G + +LG  +    V    L
Sbjct: 261 FTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHL 320

Query: 148 LGTLENIPVVQIAAGY--------------CYLLALACQ-------PSGMAVYSVGCGLG 186
           +  +E+    + +A +               Y++ +AC            A+ + G GL 
Sbjct: 321 IPCIESSGKDKSSAFHQGSGAGAQGSNVTGSYVMDIACGGRHSVVITDAGALLTFGWGLY 380

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+ G G+  D+  P L+    LL  +   +AAG WH   V  +G++  +G  ++G LG G
Sbjct: 381 GQCGQGNNADQLRPTLVP--SLLGTRVEKIAAGLWHTLCVSVNGQIYAFGGNQFGQLGTG 438

Query: 247 NEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
           +++ E+ P+ + A    +  +  V+ G   + ++++DG ++++G  +   LG
Sbjct: 439 SDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLG 490



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G R+ + AAG   T+ +S  GQ+YAFG + FG  + G    +  TSP+ +++
Sbjct: 394 PTLVPSLLGTRVEKIAAGLWHTLCVSVNGQIYAFGGNQFG--QLGTGSDQPETSPRQLDA 451

Query: 98  --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
              +N      + G   +A+L+ +G ++T+ W    +LG
Sbjct: 452 SRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLG 490


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 25/319 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP      Q   + QAA G   T+L++  G++Y  G +  G+  +          PQ + 
Sbjct: 26  TPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLP-NKRPQFIS 84

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           +L+N  V Q + G   +  L+  G++  FSWG++A  +LGH  +        ++ ++   
Sbjct: 85  ALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATGQLGHDLDMVSYPAPRMIKSIATK 142

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VVQI+ G+ + LAL    +   +++ G    G+LG G+ T +K P       L  +   
Sbjct: 143 TVVQISCGHSHCLALT---NSGELFAWGANEYGQLGLGT-TGKKVPTATLVKSLAGIPIA 198

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A G  H+  V + G +  WG   +G LG  + +    P  ++ L  +   +++ GD  
Sbjct: 199 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDF 258

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++++G V++ G G    LGH          H N + P++V  L  +  ++ QI+   
Sbjct: 259 SVFLTQEGGVFTCGLGTFGQLGHGT--------HGNEILPRMVFEL--MGSKITQIACGR 308

Query: 335 SIYWNAHTFALTES-GKLY 352
                 HT A   S GK+Y
Sbjct: 309 K-----HTLAFVPSRGKVY 322



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 24/299 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G    GE   G    + V +P+ ++  +   V QAA G   T +L+++G++YT   
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH T     +    +  LEN  V Q++ G  + LAL    +   ++S G    G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119

Query: 188 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LGH         PR+I+      +  V ++ G  H   +   G +  WG   YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177

Query: 247 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
               + VP   +V++L  +    +A G   +F VS+ G ++ +G      LG N +    
Sbjct: 178 TTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---- 232

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +   P  + +L+ +  R +      S++       LT+ G ++  G G  GQLG
Sbjct: 233 ----DSRCYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 235 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  E E V  P+ +           A G   T ++++DG +Y+ G  + 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   +   N+      PQ +++L+  N  V Q+S   S     H+ ALT  G+L+
Sbjct: 66  GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111

Query: 353 AFGAGDKGQLGIEL 366
           ++G+   GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 29/274 (10%)

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G  F  +L+  G VY++   +  +LGH T+ ND+    ++   +N  + QIA G  + L
Sbjct: 215 FGQNFAVMLTDTGGVYSWGLCSYGKLGHPTK-NDISIPSMISAFKNKQITQIACGKDHSL 273

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           AL     G+ VY+ G G GG+LG G+      P++I  F+  + +   +A G   +  + 
Sbjct: 274 AL--DEIGV-VYAWGNGSGGRLGLGNSEVVSIPKIIPHFE--DEKITSIACGQEFSLALS 328

Query: 228 QDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
             G+V +WG G +G LG+       +S PKV+  L    A  ++ G++ + V+S+ GDVY
Sbjct: 329 DSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLP--PASQISCGNWHSMVLSKSGDVY 386

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           +FG      LGH+    G G+      TP +V    Q+  ++ +I    +  +NA    L
Sbjct: 387 TFGSNIDCRLGHS----GNGS------TPTMV----QIGSKIKKIGAGAN--FNA---VL 427

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           +ES  +Y +G+    QLG+ L +++   G P+ V
Sbjct: 428 SESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVV 461



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 142/315 (45%), Gaps = 34/315 (10%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G    ++++D G VY++G  S+G+  +  +    ++ P ++ + KN  + Q A G   + 
Sbjct: 216 GQNFAVMLTDTGGVYSWGLCSYGKLGHPTKND--ISIPSMISAFKNKQITQIACGKDHSL 273

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
            L   G VY +  G+  RLG         P  ++   E+  +  IA G  + LAL+   S
Sbjct: 274 ALDEIGVVYAWGNGSGGRLGLGNSEVVSIPK-IIPHFEDEKITSIACGQEFSLALS--DS 330

Query: 175 GMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
           G  V+S G GL G LG+   T   +  P++I       L P   ++ G WH+ V+ + G 
Sbjct: 331 G-KVFSWGKGLHGNLGYDVSTMLSQSTPKVIPM-----LPPASQISCGNWHSMVLSKSGD 384

Query: 232 VCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           V T+G      LGH GN    S P +VQ  + +K I    G     V+SE   +Y++G  
Sbjct: 385 VYTFGSNIDCRLGHSGN---GSTPTMVQIGSKIKKI--GAGANFNAVLSESNAIYTWGSN 439

Query: 291 ESASLGHNAIADGQGNRHANVL-TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
               LG   + D     H N    PQ+V +L       +++          H   LT++G
Sbjct: 440 IHCQLG-VLLPD-----HRNYTGEPQVVKTLLPYPISTIEVGY-------EHVVVLTDTG 486

Query: 350 KLYAFGAGDKGQLGI 364
           +++ FG     Q G+
Sbjct: 487 EVFTFGDNSMMQCGV 501



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 52/316 (16%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N   G+  L   EV   P      +  +I   A G   ++ +SD+G+V+++GK   G   
Sbjct: 286 NGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLG 345

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH---T 137
           Y V      ++P+++  L      Q + GN+ + VLS+ G VYTF    D RLGH    +
Sbjct: 346 YDVSTMLSQSTPKVIPMLPP--ASQISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGS 403

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-----HG 192
            P  V+    +G+     + +I AG  +   L+      A+Y+ G  +  +LG     H 
Sbjct: 404 TPTMVQ----IGS----KIKKIGAGANFNAVLS---ESNAIYTWGSNIHCQLGVLLPDHR 452

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           + T E  P++++   LL      +  G  H  V+   G V T+G       G G    E+
Sbjct: 453 NYTGE--PQVVK--TLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVG----EA 504

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL-----GHNAIADGQGNR 307
           + +V               ++T   + ++  V+    G ++SL     GHN      G+ 
Sbjct: 505 IKEVC--------------NFTRVKIPDNSTVFKIAAGGNSSLISLSSGHNI----YGSE 546

Query: 308 HANVLTPQLVTSLKQV 323
            A++LT + +  L+ +
Sbjct: 547 LASLLTDESLVDLRFI 562



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           P  +  G   A ++   G V +WG   YG LGH  +   S+P ++ A  + +   +A G 
Sbjct: 210 PTTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGK 269

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             +  + E G VY++G G    L       G GN    V  P+++   +  +E++  I+ 
Sbjct: 270 DHSLALDEIGVVYAWGNGSGGRL-------GLGNSEV-VSIPKIIPHFE--DEKITSIAC 319

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                    + AL++SGK++++G G  G LG + V+    +  P+ +
Sbjct: 320 GQEF-----SLALSDSGKVFSWGKGLHGNLGYD-VSTMLSQSTPKVI 360


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 24/294 (8%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P   + L+N+     A G     V+SR G ++    G+   LG     +   P  +   L
Sbjct: 148 PDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLL 207

Query: 152 E-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
              +  V I  G  + +AL  +     VYS GCG  G+LGHG+      P LI++ +  +
Sbjct: 208 PVMVTTVAIHPGGRHAMALTAEGK---VYSWGCGDRGQLGHGNTLGYLDPTLIDELK--S 262

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            +   +A GA H+  V  DG++ +WG G  G LGHGN   + +PK + +LN    + VA 
Sbjct: 263 KEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVAC 322

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G+  T  V+ D DV+S+G G +  LG+       G    +   P  +       E +   
Sbjct: 323 GECYTIAVAGD-DVWSWGLGGNGELGY-------GVEMPSYYMPTKI-------EALFFK 367

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDLS 384
            +TN     A +FA++ +GK++A+G+GD+ +LG+    N+     P  +  DL 
Sbjct: 368 GITNVACGYATSFAVSANGKVWAWGSGDRFRLGL---GNEKVIVKPREIQGDLK 418



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 11/252 (4%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G    M ++  G+VY++G    G+  +G   T     P L++ LK+  V + A G   + 
Sbjct: 219 GGRHAMALTAEGKVYSWGCGDRGQLGHG--NTLGYLDPTLIDELKSKEVTKIACGAMHSI 276

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
            +  +G+++++  G++  LGH      + P  ++ +L    ++ +A G CY +A+A    
Sbjct: 277 AVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIM-SLNGKHIMAVACGECYTIAVA---- 331

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           G  V+S G G  G+LG+G      + P  IE      +  V  A G   +  V  +G+V 
Sbjct: 332 GDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNV--ACGYATSFAVSANGKVW 389

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            WG G    LG GNE+    P+ +Q  L   K   V    +    + E+G VY +G  E 
Sbjct: 390 AWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449

Query: 293 ASLGHNAIADGQ 304
             +G++  A  Q
Sbjct: 450 GPVGNDEDAKQQ 461



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L+   + + A GA  ++ +   G+++++G  S G   +G    +L+  P+ + S
Sbjct: 254 PTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLL--PKKIMS 311

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE------PNDVEPHPLLGTL 151
           L    ++  A G  +T  ++ +  V+++  G +  LG+  E      P  +E     G  
Sbjct: 312 LNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKG-- 368

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               +  +A GY    A++       V++ G G   +LG G+      PR I Q  L   
Sbjct: 369 ----ITNVACGYATSFAVSANGK---VWAWGSGDRFRLGLGNEKVIVKPREI-QGDLKGK 420

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
           +   V A  +HA  + ++G+V  WG    G +G+  +
Sbjct: 421 KIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDED 457


>gi|3414815|gb|AAC31434.1| rjs [Mus musculus]
          Length = 209

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 22/194 (11%)

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           ESL ++ V+Q A       +LSR GRVYT ++ +D           + P  + G L +  
Sbjct: 4   ESLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQG-LASRN 52

Query: 156 VVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLN 210
           +V+IAA   G+ YL ALA       VYS GCG GG+LGHG     + P+++  F  +   
Sbjct: 53  IVKIAAHSDGHHYL-ALAATGE---VYSWGCGDGGRLGHGDTVPLEEPKVVSAFSGKQAG 108

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA- 269
              V +A G+ ++A +  +G + TWG G YG LGHG+ E E++P +V  L  +K I VA 
Sbjct: 109 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 168

Query: 270 -TGDYTTFVVSEDG 282
            +GD  T  V+E+G
Sbjct: 169 GSGDAQTLAVTENG 182



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 24/200 (12%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           + C SL  + ++Q A    R +++S  G+VY  A+  D              + +PQLV+
Sbjct: 1   IQCESLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLVQ 46

Query: 97  SL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTL 151
            L  +NI  + A         L+  G VY++  G+  RLGH       EP       G  
Sbjct: 47  GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVVSAFSGKQ 106

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               VV IA G  Y  A+  +     +Y+ G G  G+LGHGS  DE  P L+   + L +
Sbjct: 107 AGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKV 163

Query: 212 QPVVVAAGAWHAAVVGQDGR 231
             V   +G      V ++GR
Sbjct: 164 IDVACGSGDAQTLAVTENGR 183



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 17/160 (10%)

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           +D   P+L++     N+  +   +   H   +   G V +WG G  G LGHG+      P
Sbjct: 37  SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 96

Query: 255 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           KVV A +  +A    +H+A G   +  ++ +G++Y++G G    LGH +  D        
Sbjct: 97  KVVSAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA------ 150

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
              P LV  LK +  +V+ ++  +    +A T A+TE+G+
Sbjct: 151 --IPMLVAGLKGL--KVIDVACGSG---DAQTLAVTENGR 183



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 17/114 (14%)

Query: 254 PKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           P++VQ L     + +A  +  +    ++  G+VYS+GCG+   LGH             +
Sbjct: 42  PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVP--------L 93

Query: 312 LTPQLVTSL--KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             P++V++   KQ  + VV I+  ++     ++ A+T  G+LY +G G+ G+LG
Sbjct: 94  EEPKVVSAFSGKQAGKHVVHIACGST-----YSAAITAEGELYTWGRGNYGRLG 142


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 31/289 (10%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAA 161
           ++  A G+  T ++    ++Y+F  G    LG+ H E  DV+    L   +    VQ+A 
Sbjct: 23  IIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLE--DVKIPQQLNLKQ--KFVQVAC 78

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + LAL    SG+ ++S G  L G+LGHG++ D   P+ + Q  ++      +  G  
Sbjct: 79  GATHSLALTI--SGI-IFSWGKNLRGQLGHGNQNDCLKPKEVIQNDII---AEYIDCGDQ 132

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H+A V ++  + TWG G+Y  LGHG    E +PK V  L D    HV+ G   T +V+ +
Sbjct: 133 HSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGE 192

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW--- 338
           G VY++G G    LG             +  T  L T +  + ++  +    N +Y+   
Sbjct: 193 GFVYAWGDGMYGKLG----------VSEDCKTQTLPTRVGMICKKFRK----NKMYYQVA 238

Query: 339 --NAHTFALTESGKLYAFGAGDKGQLGIELVNN-QTERGNPERVDIDLS 384
             + H+ AL+ +G+++ +G+   G LGI    + Q     P+++ I L+
Sbjct: 239 AGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLN 287



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 33/267 (12%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   II  A G   T++I +  Q+Y+FG    G    G +  + V  PQ + +LK  F 
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLL--GNEHLEDVKIPQQL-NLKQKF- 73

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           VQ A G   +  L+  G +  FSWG + R  LGH  + + ++P  ++          I A
Sbjct: 74  VQVACGATHSLALTISGII--FSWGKNLRGQLGHGNQNDCLKPKEVIQN-------DIIA 124

Query: 162 GY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR---LIEQFQLLNLQPVVV 216
            Y  C     A       +Y+ G G   +LGHG  TDE  P+   ++E + + +     V
Sbjct: 125 EYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTH-----V 179

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES------VPKVVQALNDVKAIH-VA 269
           + G  H  +V  +G V  WG G YG LG  +E+C++      V  + +     K  + VA
Sbjct: 180 SCGMNHTLIVTGEGFVYAWGDGMYGKLG-VSEDCKTQTLPTRVGMICKKFRKNKMYYQVA 238

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLG 296
            G   +  +S +G ++++G  +S +LG
Sbjct: 239 AGSMHSLALSTNGQIFTWGSSKSGNLG 265



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 17/104 (16%)

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L D + I++A G + T ++ E+  +YSFG G++  LG+  + D        V  PQ + +
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLED--------VKIPQQL-N 68

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           LKQ   + VQ++   +     H+ ALT SG ++++G   +GQLG
Sbjct: 69  LKQ---KFVQVACGAT-----HSLALTISGIIFSWGKNLRGQLG 104



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           IS  GQ Y +GK+ + +   G          +L   L+   ++ +A  + F+A+L+ +G 
Sbjct: 443 ISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDKFSALLTDKGE 502

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA---- 177
           V+TF   +   LGH  +   V P P +  + +IP          ++ +AC P GM     
Sbjct: 503 VWTFGTSDCGVLGHQEKNYYVVPEPKM--VNDIP---------QMIYIACGPQGMVSISA 551

Query: 178 ----VYSVGCGLGGKLG--------HGSRTDEK---HPRLIEQFQLLNLQPVVVAAGAWH 222
               +Y+ G  + G+LG        + +  DE      +  EQ +   +Q   V  G +H
Sbjct: 552 HKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKSVDMGMFH 611

Query: 223 AAVVGQDGRVCTWGWGRYG 241
           +  +  +G++ + G   Y 
Sbjct: 612 SVAIDNNGKIYSCGLRIYS 630



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 68/213 (31%)

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC-------------------- 242
           I++ +L + + + +A G  H  ++ ++ ++ ++G G+ G                     
Sbjct: 13  IQELELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQK 72

Query: 243 ------------------------------LGHGNE-ECESVPKVVQALNDVKAIHVATG 271
                                         LGHGN+ +C    +V+Q  ND+ A ++  G
Sbjct: 73  FVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ--NDIIAEYIDCG 130

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
           D  +  VS++ ++Y++G G+   LGH    D         L P+ V  L+      V   
Sbjct: 131 DQHSAFVSKNKELYTWGNGQYYRLGHGVTTDE--------LIPKKVVVLEDYYVTHVSCG 182

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           +        HT  +T  G +YA+G G  G+LG+
Sbjct: 183 MN-------HTLIVTGEGFVYAWGDGMYGKLGV 208



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 28/159 (17%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHV-ATGDY 273
           ++    HA  + Q G+   WG   Y  LG G       +P+ +Q + + K I + A  D 
Sbjct: 433 ISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDK 492

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV------NERV 327
            + ++++ G+V++FG  +   LGH      Q   +  V  P++V  + Q+       + +
Sbjct: 493 FSALLTDKGEVWTFGTSDCGVLGH------QEKNYYVVPEPKMVNDIPQMIYIACGPQGM 546

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
           V IS        AH        +LYA+G    GQLGI++
Sbjct: 547 VSIS--------AH------KRQLYAWGNNIYGQLGIKI 571


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 37/293 (12%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNFFTAVLSREGRVYTFS 126
           V+++G+    + + G+  T     P  V++L+ +  +     G++ TA ++  G +YT+ 
Sbjct: 1   VFSWGRGE--DGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58

Query: 127 WGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
            G   +LGH     H+ P  VE       L  + +V IA G  +    A   S   +Y+ 
Sbjct: 59  GGMYGKLGHGNESGHSTPRRVEA------LVGLSIVDIACGSRHT---AVVTSKGCLYTW 109

Query: 182 GCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 239
           G    G  GHG     ++ P+L+E+   LN + VV ++A  +H A +  D     WG G+
Sbjct: 110 GDKENGVAGHGDTEGHQYTPKLLER---LNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           +G LG+G E     P+++++L       VA G + + V++ DG +Y+FG GE   LGH  
Sbjct: 167 FGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH-- 224

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
            AD       N L P LV +L  V   V QI+      W +H+ ALT  G+ +
Sbjct: 225 -AD-----KVNKLKPTLVEALDGV--VVKQITCG----W-SHSVALTSEGEYH 264



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 20/196 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+S G G  G+LG G  +D+  P  ++  + + +    V  G++H A V  +G + TWG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGI-ITHVTCGSYHTAAVASNGDLYTWGG 59

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G YG LGHGNE   S P+ V+AL  +  + +A G   T VV+  G +Y++G  E+   GH
Sbjct: 60  GMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                  G+   +  TP+L+  L    ++VVQ+S         HT  LT+  + +A+G G
Sbjct: 120 -------GDTEGHQYTPKLLERLN--GKKVVQLSAC-----GFHTACLTDDHETFAWGEG 165

Query: 358 DKGQLGIELVNNQTER 373
             G+LG     N TER
Sbjct: 166 KFGRLG-----NGTER 176



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 25/243 (10%)

Query: 125 FSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVV-QIAAGYCYLLALACQPSGMAVYSV 181
           FSWG   D +LG     +  EP   +  L  + ++  +  G  +  A+A   S   +Y+ 
Sbjct: 2   FSWGRGEDGQLGIGDTSDQDEP-TYVDALRGVGIITHVTCGSYHTAAVA---SNGDLYTW 57

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G G+ GKLGHG+ +    PR +E   L+ L  V +A G+ H AVV   G + TWG    G
Sbjct: 58  GGGMYGKLGHGNESGHSTPRRVEA--LVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENG 115

Query: 242 CLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
             GHG+ E  +  PK+++ LN  K + ++   + T  +++D + +++G G+   LG+   
Sbjct: 116 VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGT- 174

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
                    N  +P+L+ SL  + +   Q++         H+  +T  GK+Y FG G+ G
Sbjct: 175 -------ERNCHSPRLIESL--IGKYPCQVACGG-----FHSAVITRDGKMYTFGGGEHG 220

Query: 361 QLG 363
           QLG
Sbjct: 221 QLG 223



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 3/136 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G +++Q +A    T  ++D  + +A+G+  FG    G +  +   SP+L+E
Sbjct: 128 TPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE--RNCHSPRLIE 185

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL   +  Q A G F +AV++R+G++YTF  G   +LGH  + N ++P  L+  L+ + V
Sbjct: 186 SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKP-TLVEALDGVVV 244

Query: 157 VQIAAGYCYLLALACQ 172
            QI  G+ + +AL  +
Sbjct: 245 KQITCGWSHSVALTSE 260


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 148/305 (48%), Gaps = 26/305 (8%)

Query: 43   SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG  + Q A   G     + +++ G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 828  ALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALR 885

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ A G   +AV++ +G+++TF +G+  RLGH +  N   P  ++  LEN  + Q+
Sbjct: 886  GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQV 944

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + + ++     + V++ G G  GKLG G  + +  P  IE    + ++   ++ G
Sbjct: 945  ACGLNHTVIVS--QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKK--ISCG 1000

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTT 275
            A   A +  DG++  +G  R      GN E  +     P+VV AL+    I ++ G   T
Sbjct: 1001 AQFTAALTWDGKLFMFGQDRMC----GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHT 1056

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
              ++  G VY++G      LG      G  N   +V  P LV SL   N R +    T+S
Sbjct: 1057 IALTSKGIVYTWGSNTDGQLGL-----GHTN---HVQEPTLVESLSGKNIRQISAGRTHS 1108

Query: 336  IYWNA 340
              W+ 
Sbjct: 1109 AAWSC 1113



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 155/356 (43%), Gaps = 72/356 (20%)

Query: 68   VYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
            VY FG    G+ AE G      V  PQL +S       +   G   T +++  G V +  
Sbjct: 752  VYLFGAGRHGQLAEVGSG----VLVPQLTKSFHE--ARKVVCGQNCTFIINNNGVVLSCG 805

Query: 127  WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSV 181
             G+  RLG     +D      +  L+   V Q+A      G+    A+A   +G  V+S 
Sbjct: 806  EGSYGRLGQGNS-DDSNRLTHISALQGFIVKQLATSTGSDGH----AIALTENG-EVFSW 859

Query: 182  GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            G G  GKLGHG+   ++ PR IE   L   + V VA G  H+AVV  DG++ T+G+G YG
Sbjct: 860  GDGDYGKLGHGNSDRQRRPRQIEA--LRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYG 917

Query: 242  CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHNAI 300
             LGHG+   + +P+ V AL +     VA G   T +VS+D   V++ G G+   LG    
Sbjct: 918  RLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGT 977

Query: 301  A-------------------------------DGQ----------GN---RHANVLTPQL 316
            +                               DG+          GN   R +    PQ+
Sbjct: 978  SAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQV 1037

Query: 317  VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            VT+L   +  ++ IS+        HT ALT  G +Y +G+   GQLG+   N+  E
Sbjct: 1038 VTALS--SHHIIDISVGAE-----HTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 30/211 (14%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWG 236
           V S G G  G+LG G+  D      I   Q   ++ +  + G+  HA  + ++G V +WG
Sbjct: 801 VLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWG 860

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            G YG LGHGN + +  P+ ++AL   + + VA G   + VV+ DG +++FG G+   LG
Sbjct: 861 DGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLG 920

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTESG-K 350
           H +                  T+ K++ ERV  ++L N I         HT  +++    
Sbjct: 921 HGS------------------TTNKKIPERV--MALENYIIGQVACGLNHTVIVSQDNLT 960

Query: 351 LYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           ++A G GD G+LGI      + + +P ++++
Sbjct: 961 VWACGDGDYGKLGI---GGTSAKTSPTKIEV 988



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 59/239 (24%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE------------------- 78
            P    +L+G  ++Q A G   + +++  G+++ FG   +G                    
Sbjct: 878  PRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALE 937

Query: 79   --------------------------------AEYGVQGTKLVTSPQLVESLKNIFVVQA 106
                                             + G+ GT   TSP  +E L  + + + 
Sbjct: 938  NYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKI 997

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQIAAGYCY 165
            + G  FTA L+ +G+++ F  G D   G+         +P + T L +  ++ I+ G  +
Sbjct: 998  SCGAQFTAALTWDGKLFMF--GQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEH 1055

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
             +AL    S   VY+ G    G+LG G     + P L+E     N++   ++AG  H+A
Sbjct: 1056 TIALT---SKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQ--ISAGRTHSA 1109



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 36/164 (21%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF-GEAEYGV 83
            GK  + G     +P     L  + I + + GA  T  ++  G+++ FG+D   G  E   
Sbjct: 970  GKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCE--- 1026

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTE 138
              T    +PQ+V +L +  ++  ++G   T  L+ +G VYT+    D +LG     H  E
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086

Query: 139  PNDVEP---------------------------HPLLGTLENIP 155
            P  VE                            H LLGT E+IP
Sbjct: 1087 PTLVESLSGKNIRQISAGRTHSAAWSCEHDDAGHTLLGTPESIP 1130


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 114/234 (48%), Gaps = 8/234 (3%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           ++ Q   G   ++L++D G VY FG+  +G+  +G +  K +  P+ VE+L        +
Sbjct: 136 KVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTR--KDLDRPKRVEALVRAQQTITS 193

Query: 108 IGNFFTAVLSREGRVYTFSWGNDAR-LGHHTEPNDVEPHPLLGTLEN-IPVVQIAAGYCY 165
           IG  F    +        SWG     LGH  +P+ V+    +G L+N   ++Q+AAG  +
Sbjct: 194 IGVGFDQTFAINADGVVHSWGRQGPWLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQH 253

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            L L        VYS+G    G LG G    ++    +    L N     VAAG  H+ V
Sbjct: 254 TLLLTIDGK---VYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVV 310

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
           +  DG V T+G G  G LGHG+ + + VP+ VQ + D KA  +A G   T V++
Sbjct: 311 LASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFD-KACAIAAGFEHTIVLT 363



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 109/261 (41%), Gaps = 24/261 (9%)

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T     +G  Y+F  G   +LGH    N  E HP    ++   V QI  G  + + L   
Sbjct: 97  TTTAVEDGTAYSFGQGEWGKLGHGGAAN--EQHPKQLEVQG-KVTQIGVGDQHSVLLT-- 151

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
             G  VY+ G G+ G+LGHG+R D   P+ +E           +  G      +  DG V
Sbjct: 152 -DGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVV 210

Query: 233 CTWGWGRYG-CLGHGNE-ECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
            +WG  R G  LGH  + +    P+ V  L N  K + VA G   T +++ DG VYS G 
Sbjct: 211 HSWG--RQGPWLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGK 268

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
            +   LG       +         P  +TSL   N  + Q++         H+  L   G
Sbjct: 269 NKDGCLGQGKTVKKE------TANPMPITSLN--NYVITQVAAGEK-----HSVVLASDG 315

Query: 350 KLYAFGAGDKGQLGIELVNNQ 370
            +  FG+G  G+LG     NQ
Sbjct: 316 SVLTFGSGSNGRLGHGDTKNQ 336



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 38/289 (13%)

Query: 56  AGRTMLIS------DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           A R ML++      + G  Y+FG+  +G+  +G  G      P+ +E      V Q  +G
Sbjct: 88  AHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGHG--GAANEQHPKQLEVQGK--VTQIGVG 143

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLA 168
           +  + +L+  G VYTF  G   +LGH T  +   P  +   +     +  I  G+    A
Sbjct: 144 DQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFA 203

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVV 226
           +        V+S G   G  LGH ++ D  H +  ++  LL  +  +  VAAG  H  ++
Sbjct: 204 INADG---VVHSWGR-QGPWLGHAAQPD--HVKQPQEVGLLKNKAKIMQVAAGKQHTLLL 257

Query: 227 GQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
             DG+V + G  + GCLG G   ++  + P  + +LN+     VA G+  + V++ DG V
Sbjct: 258 TIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSV 317

Query: 285 YSFGCGESASLGH-----------------NAIADGQGNRHANVLTPQL 316
            +FG G +  LGH                  A A   G  H  VLT QL
Sbjct: 318 LTFGSGSNGRLGHGDTKNQDVPRTVQGVFDKACAIAAGFEHTIVLTGQL 366



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +I+Q AAG   T+L++  G+VY+ GK+  G    G    K   +P  + SL N  + Q A
Sbjct: 243 KIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVA 302

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G   + VL+ +G V TF  G++ RLGH    N   P  + G  +      IAAG+ + +
Sbjct: 303 AGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFDK--ACAIAAGFEHTI 360

Query: 168 ALACQ 172
            L  Q
Sbjct: 361 VLTGQ 365



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 83/205 (40%), Gaps = 31/205 (15%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWG 236
           V S G    G+LG+    D K+PR +     L    + + AG W+ +V V  +G    WG
Sbjct: 7   VVSFGLNFNGQLGYECY-DNKNPRSVNAPSDL----ISLHAG-WNCSVAVNSEGTPYFWG 60

Query: 237 WGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
                  G     E   +P +       K  H       T    EDG  YSFG GE   L
Sbjct: 61  TMPSKYDGKAKFLEPSPLPAISIGF---KLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKL 117

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           GH   A+ Q   H   L         +V  +V QI + +      H+  LT+ G +Y FG
Sbjct: 118 GHGGAANEQ---HPKQL---------EVQGKVTQIGVGDQ-----HSVLLTDGGHVYTFG 160

Query: 356 AGDKGQLGIELVNNQTERGNPERVD 380
            G  GQLG      + +   P+RV+
Sbjct: 161 QGIYGQLGH---GTRKDLDRPKRVE 182


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 8/266 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+     Q ++ I A+ G    + ++D+G  Y++G +  G+  +    TK V  P+L+ES
Sbjct: 400 PVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTK-VHVPKLIES 458

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LK+  +  A++    +AV++  G +Y F   +  +LG     +   P  L+   E   + 
Sbjct: 459 LKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQ-LVKGFEGTEIS 517

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +A G  +   + C  +G  +++ G    G+LG G     K   L+    L N     VA
Sbjct: 518 MVACGLYH--TIICTATG-GLFACGKNDYGQLGLGHNRQIKVASLV---SLPNEMVSYVA 571

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           +G +H+ VV   GR  ++G   YG LG GN+  ++VP VV    + + +    G Y T +
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVL 631

Query: 278 VSEDGDVYSFGCGESASLGHNAIADG 303
           +SE G V+ FG      LG+   AD 
Sbjct: 632 LSEQGQVFVFGRNNKGQLGNRGSADA 657



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 32/306 (10%)

Query: 65  AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 124
           +G++Y+ G++S+GE   G    +   +   +    +I   Q A GN   AVL+ +G V T
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIR--QVASGNETLAVLTNDGVVLT 377

Query: 125 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
                  + G  H +   +   P+   L +  V  IAA       +A   SG+A YS G 
Sbjct: 378 CGLNKSGQCGQGHFDERVMMLRPVQA-LRSQRVKFIAASNGCEHMIALTDSGLA-YSWGY 435

Query: 184 GLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
              G+LGH + T + H P+LIE  +   L+   V+    H+AV+   G +  +G    G 
Sbjct: 436 NDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH--HSAVITDSGELYAFGMNDCGQ 493

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES----ASLGHN 298
           LG  + + +S P++V+     +   VA G Y T + +  G +  F CG++      LGHN
Sbjct: 494 LGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGL--FACGKNDYGQLGLGHN 551

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                   R   V +   + SL   NE V   S   S Y+  H+  +T SG+ ++FG  D
Sbjct: 552 --------RQIKVAS---LVSLP--NEMV---SYVASGYY--HSVVVTNSGRTFSFGRND 593

Query: 359 KGQLGI 364
            GQLGI
Sbjct: 594 YGQLGI 599



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 26/318 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQA 106
           I Q A+G     ++++ G V   G +  G+   G    + V   + V++L++  +  + A
Sbjct: 356 IRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAA 414

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           + G      L+  G  Y++ + +  +LGH      V    L+ +L++  +   +  Y + 
Sbjct: 415 SNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHH- 473

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
            +     SG  +Y+ G    G+LG      +  P+L++ F+   +   +VA G +H  + 
Sbjct: 474 -SAVITDSG-ELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEIS--MVACGLYHTIIC 529

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G +   G   YG LG G+     V  +V   N++ + +VA+G Y + VV+  G  +S
Sbjct: 530 TATGGLFACGKNDYGQLGLGHNRQIKVASLVSLPNEMVS-YVASGYYHSVVVTNSGRTFS 588

Query: 287 FGCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           FG  +   LG        GN+ H NV  P +V      N R+V+   T   Y   HT  L
Sbjct: 589 FGRNDYGQLG-------IGNKVHQNV--PNVVA--LSANTRMVRA--TCGCY---HTVLL 632

Query: 346 TESGKLYAFGAGDKGQLG 363
           +E G+++ FG  +KGQLG
Sbjct: 633 SEQGQVFVFGRNNKGQLG 650



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 102/230 (44%), Gaps = 37/230 (16%)

Query: 157 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           V +    C L AL  QP      +   +YS G    G+LG G          IE+ QL +
Sbjct: 296 VNLDTSICKLAALKEQPMYGKCEASGELYSCGQNSYGELGTGDD--------IERHQLTS 347

Query: 211 LQPV------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND- 262
           +          VA+G    AV+  DG V T G  + G  G G+ +E   + + VQAL   
Sbjct: 348 ISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQ 407

Query: 263 -VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            VK I  + G      +++ G  YS+G  +   LGH        N    V  P+L+ SLK
Sbjct: 408 RVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHE-------NLTTKVHVPKLIESLK 460

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
               R   +S         H+  +T+SG+LYAFG  D GQLG++   +Q+
Sbjct: 461 DKKLRYASVSY-------HHSAVITDSGELYAFGMNDCGQLGLDHTQHQS 503



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL    +   A+G   +++++++G+ ++FG++ +G+   G +  + V  P +V    N  
Sbjct: 561 SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNV--PNVVALSANTR 618

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIA 160
           +V+A  G + T +LS +G+V+ F   N  +LG+    + + P PL    E      V +A
Sbjct: 619 MVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVA 678

Query: 161 AGY 163
           AG+
Sbjct: 679 AGF 681



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 18/201 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  +G  I   A G   T++ +  G ++A GK+ +G  + G+   + +    LV 
Sbjct: 504 TPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYG--QLGLGHNRQIKVASLV- 560

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLGTL 151
           SL N  V   A G + + V++  GR ++F   +  +LG     H   PN      ++   
Sbjct: 561 SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPN------VVALS 614

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            N  +V+   G CY   L  +   + V+  G    G+LG+    D   P  ++     N 
Sbjct: 615 ANTRMVRATCG-CYHTVLLSEQGQVFVF--GRNNKGQLGNRGSADALLPVPLKVRPEKNS 671

Query: 212 QPVV-VAAGAWHAAVVGQDGR 231
           +  V VAAG +  +++ +  R
Sbjct: 672 RRCVDVAAGFYTTSLIVERKR 692


>gi|260950135|ref|XP_002619364.1| hypothetical protein CLUG_00523 [Clavispora lusitaniae ATCC 42720]
 gi|238846936|gb|EEQ36400.1| hypothetical protein CLUG_00523 [Clavispora lusitaniae ATCC 42720]
          Length = 535

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 160/311 (51%), Gaps = 38/311 (12%)

Query: 90  TSPQLVESLKNI--FVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVE 143
           ++P +VE+L  I   +VQ A  +  +A+L   G VY  +WG    N+  LG  ++   V+
Sbjct: 196 STPGMVENLPKIDAHIVQLAATDNLSAILYSNGDVY--AWGTFRCNEGMLGF-SKSTRVQ 252

Query: 144 PHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
             P+ L +L+NI  VQ+AAG  ++LAL  +  G+ VY+ G G   +LG   R  E+H RL
Sbjct: 253 ETPIKLASLKNI--VQLAAGKDHVLALDTK--GI-VYAWGNGQQFQLGR--RILERH-RL 304

Query: 203 I----EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE------- 251
                +QF L +++   +++G +H   + +D  V TWG  ++G  G  +E  E       
Sbjct: 305 AALEPQQFGLYDIK--YISSGDFHCFAIDRDDNVYTWGLNQFGQCGITDENGELEDGSLI 362

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAIADGQ-GNRH 308
             P ++  L D+K I +A G++ T  +S +GDVYS+G  +   +G   + + D    ++H
Sbjct: 363 VKPTLIPKLKDLKIIEIAGGEHHTLALSSNGDVYSWGRYDMKEIGIPADKLPDSTYKDQH 422

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
               +    T ++  N    Q+ +      + H+FA+T  G +Y++G GD    G+  ++
Sbjct: 423 GKPRSVPEPTRIEFANNE--QVKMKTIAAGSHHSFAVTVDGMVYSWGFGDTYAPGLGPID 480

Query: 369 NQTERGNPERV 379
              E+  P R+
Sbjct: 481 GDVEK--PTRI 489



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 28/226 (12%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSP 92
           V  TP+   SL+   I+Q AAG    + +   G VYA+G    F      ++  +L    
Sbjct: 251 VQETPIKLASLK--NIVQLAAGKDHVLALDTKGIVYAWGNGQQFQLGRRILERHRLAALE 308

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE------PHP 146
                L +I  + +  G+F    + R+  VYT+      + G   E  ++E         
Sbjct: 309 PQQFGLYDIKYISS--GDFHCFAIDRDDNVYTWGLNQFGQCGITDENGELEDGSLIVKPT 366

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--------------HG 192
           L+  L+++ +++IA G  + LAL+   S   VYS G     ++G              HG
Sbjct: 367 LIPKLKDLKIIEIAGGEHHTLALS---SNGDVYSWGRYDMKEIGIPADKLPDSTYKDQHG 423

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
                  P  IE      ++   +AAG+ H+  V  DG V +WG+G
Sbjct: 424 KPRSVPEPTRIEFANNEQVKMKTIAAGSHHSFAVTVDGMVYSWGFG 469


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L+++P L ES +    V A+  NF   V+   GR      G D +LGH    + + P  L
Sbjct: 42  LISTPLLPESWRLCSKVNASAVNFPGNVVCSWGR------GEDGQLGHGDTDDRLLPTKL 95

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
               +   +V +  G  Y +A +   SG  VYS G G  G+LGHG  +D   P  I   Q
Sbjct: 96  -SAFDGQDIVSVTCGADYTVARS--KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQ 152

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
            L ++ +  + G  H   V  + +V +WG  + G LG G  +   VP+ + A   ++   
Sbjct: 153 GLRIKQI--SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKM 210

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           VA G   +  ++EDGD+Y +G G   +LG     D         L P+ V       +++
Sbjct: 211 VAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--------RLIPEKVNI---DGDKI 259

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V +S      W  HT +++ SG LY  G    GQLG
Sbjct: 260 VMVSCG----WR-HTISISSSGGLYTHGWSKYGQLG 290



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 21/216 (9%)

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A A    G  V S G G  G+LGHG   D   P  +  F   ++  V V  GA +     
Sbjct: 60  ASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDI--VSVTCGADYTVARS 117

Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           + G+ V +WGWG +G LGHG+     +P  ++AL  ++   ++ GD     V+ +  V S
Sbjct: 118 KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLS 177

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  ++  LG     D           PQ + + + +  ++V            H+ A+T
Sbjct: 178 WGRNQNGELGLGTTKDSH--------VPQKILAFEGIRIKMVAAG-------AEHSVAIT 222

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
           E G LY +G G  G LG+    +  +R  PE+V+ID
Sbjct: 223 EDGDLYGWGWGRYGNLGL---GDTNDRLIPEKVNID 255



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 68/297 (22%)

Query: 19  IINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY-AFGKDSFG 77
           +++++     +L R +  TPL   S +    + A+A       ++  G V  ++G+   G
Sbjct: 27  LLSKQFESSEMLARFLISTPLLPESWRLCSKVNASA-------VNFPGNVVCSWGRGEDG 79

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHH 136
           +  +G    +L+  P  + +     +V    G  +T   S+ G+ VY++ WG+  RLGH 
Sbjct: 80  QLGHGDTDDRLL--PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHG 137

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
              +   PHP+   L+ + + QI+ G C+ LA+  +     V S G    G+LG G+  D
Sbjct: 138 DPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVTMENK---VLSWGRNQNGELGLGTTKD 193

Query: 197 EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--------------- 241
              P+ I  F+ + ++  +VAAGA H+  + +DG +  WGWGRYG               
Sbjct: 194 SHVPQKILAFEGIRIK--MVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEK 251

Query: 242 ------------------------------------CLGHGNEECESVPKVVQALND 262
                                                LGHG+ E   VP+ VQAL+D
Sbjct: 252 VNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSD 308


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 157/329 (47%), Gaps = 36/329 (10%)

Query: 29  LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LL RE++    +C S     + QAA G   T+L++  G++++ G +  G+  +       
Sbjct: 25  LLPREMD----WCHSSS---VQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLP- 76

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
              PQ + SL+N  V   + G   +  L+  G+V  FSWG+++  +LGH T+        
Sbjct: 77  NKRPQFISSLENYIVTHVSCGTTHSLALTNWGQV--FSWGSNSIGQLGHDTDLQTYTTPR 134

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIE 204
           ++ T+    VVQIA+G  + LAL    +   ++S G    G+LG G+ T EK   P L++
Sbjct: 135 MIKTIATKTVVQIASGQFHSLALT---NSGELFSWGANGYGQLGLGT-TGEKVVTPTLVK 190

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
              L  +    +A G  H+  V + G +  WG   +G LG  +      P+ ++ L ++ 
Sbjct: 191 S--LAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLG 248

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
             +++ GD  +  ++++G V++ G G    LGH           +N + P++V  L  + 
Sbjct: 249 VRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTC--------SNEILPRMVFEL--MG 298

Query: 325 ERVVQISLTNSIYWNAHTFALTES-GKLY 352
            ++ QI+         HT A   S GK+Y
Sbjct: 299 SKITQIACGRR-----HTLAFVPSRGKIY 322



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 26/300 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VY +G    GE   G    + V  P+ ++   +  V QAA G   T +L+++G++++   
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 128 GNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
            +  +LGH T+  PN   P   + +LEN  V  ++ G  + LAL    +   V+S G   
Sbjct: 63  NDHGQLGHDTDCLPNK-RPQ-FISSLENYIVTHVSCGTTHSLALT---NWGQVFSWGSNS 117

Query: 186 GGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
            G+LGH +       PR+I+      +  V +A+G +H+  +   G + +WG   YG LG
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTV--VQIASGQFHSLALTNSGELFSWGANGYGQLG 175

Query: 245 HGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            G   E    P +V++L  +    +A G   +F VS+ G ++ +G      LG N +   
Sbjct: 176 LGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL--- 232

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 +   PQ + +L+ +  R +      S +       LT+ G ++  GAG  GQLG
Sbjct: 233 -----VSRCFPQQLKTLRNLGVRYISCGDDFSAF-------LTQEGGVFTCGAGTFGQLG 280



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 21/193 (10%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           MAVY  G  + G+LG G   DE+   PR ++     ++Q    A G  H  ++ +DG++ 
Sbjct: 1   MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQ--AACGTSHTLLLTKDGKLF 58

Query: 234 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           + G   +G LGH + +C     P+ + +L +    HV+ G   +  ++  G V+S+G   
Sbjct: 59  SCGNNDHGQLGH-DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH+   D Q        TP+++ ++    + VVQI+         H+ ALT SG+L
Sbjct: 118 IGQLGHD--TDLQ-----TYTTPRMIKTI--ATKTVVQIASG-----QFHSLALTNSGEL 163

Query: 352 YAFGAGDKGQLGI 364
           +++GA   GQLG+
Sbjct: 164 FSWGANGYGQLGL 176


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L ++ G+VY +G +++ +   G     LV   Q+  
Sbjct: 105 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPC-QVST 163

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G+  + VL+ +G VYT+ + N  ++G  +  N   P  +   L+N  V
Sbjct: 164 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV 223

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q   V
Sbjct: 224 VNIACG--QMCSMAVVENG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQR--V 278

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D V  I      +T+
Sbjct: 279 ACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTS 338

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 339 AAKTQSGQVYMWGQCRGQSVVLPH 362



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 194

Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 195 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 254

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 255 LGS--------SGNQPTPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 299

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V +D
Sbjct: 300 NSYGQLG---TGNKSNQSYPTTVTVD 322



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E+ +L+  Q  V  +       V ++  V   G    GCLG G+ +    PK + +L   
Sbjct: 56  EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGK 114

Query: 264 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 321
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +  ++  Q+ T+L 
Sbjct: 115 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 165

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 166 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 208



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G +  +  + P  V 
Sbjct: 263 TPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ--SYPTTVT 320

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWG 128
             K+  V  AA  +  T A  ++ G+VY   WG
Sbjct: 321 VDKDRVVEIAACHSAHTSAAKTQSGQVYM--WG 351


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 168/368 (45%), Gaps = 50/368 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P+    L   +I   + G   +   S +  QVY +G   +G+   G + +K +  P++  
Sbjct: 82  PVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKL--GNKESKDLQYPEIFN 139

Query: 97  SLKNIFVVQAAIG------NFFTAVLSR--------EGRVYTFSWGNDARLGHHT----- 137
            LK    +Q  I       N   AV+ +        + ++Y +   +D +LG  T     
Sbjct: 140 GLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDY 199

Query: 138 --EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR- 194
             +P ++ P    G +E++         C    +A    G  ++S G G   +LG+ +  
Sbjct: 200 VNQPLEMSPDYWEGNVESVKA-------CSDFTIAIDKQGR-IFSWGKGGFNRLGYKAEI 251

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            ++KHP  IE   L   Q +  + G++H+A +  +GR+ TWG    G LGHG  + +  P
Sbjct: 252 VNQKHPLQIES--LSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFP 309

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
           K VQAL +   + VA G+  T  +S++ +++S+G   S  L       G+ + +     P
Sbjct: 310 KEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQL-------GRASENLKSSDP 362

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN-QTER 373
           + ++  +  ++ + QI+       + H+  L + G +Y++G+   GQLG +  +N Q   
Sbjct: 363 KKISFFE--DKSIKQIACG-----SKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNTI 415

Query: 374 GNPERVDI 381
            + + VD+
Sbjct: 416 ASSQNVDL 423



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 21/141 (14%)

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           N V+   L+  + NI  +   A + Y +      +   VY+ GC LG KLG    +DE +
Sbjct: 16  NKVQTPHLISDISNIVKIVCGANHSYAI-----DTNFEVYAWGCNLGRKLG---LSDEYY 67

Query: 200 PRLI-----EQF-------QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG 246
            ++      EQ        +L N +   ++ G  H+ A   +  +V  WG G YG LG+ 
Sbjct: 68  NQIFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNK 127

Query: 247 NEECESVPKVVQALNDVKAIH 267
             +    P++   L   + I 
Sbjct: 128 ESKDLQYPEIFNGLKQPEGIQ 148


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 37/334 (11%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RII   AGA    +IS +G+++ +G+  +G   +G + +  +++P+ V +L NI +    
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKYVF 187

Query: 108 IGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G   T  LS       ++WGN+   +LG     +D    P     E++ V     G   
Sbjct: 188 CGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLP-----ESVAV----PGAKR 238

Query: 166 LLAL-------ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           L+AL       A   S  A+++ G G  G+LGHG   +   P L+    L     V VA 
Sbjct: 239 LVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSS--LYGHVVVAVAL 296

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV-KAIHVATGDYTTF 276
           G  H+  + + G + +WG G  G LGHG+ + + + PK +Q   D+ K I ++ G Y + 
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV 356

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
              +DG VY++G  +   LG     DG  N    +L P+ +        R   IS     
Sbjct: 357 AQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI--------RFKTISCGFQ- 407

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
               HT ALT    +Y++G G  G+LG     NQ
Sbjct: 408 ----HTVALTSDNTIYSWGCGLGGRLGTFNEKNQ 437



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 12/267 (4%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQ 93
            TP    +L  I +     G   T+ +S  AG  +Y +G + FG+   G  G      P+
Sbjct: 170 STPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPE 229

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            V       +V    G    AV+   G ++T+  G+  RLGH    N  +P  L+ +L  
Sbjct: 230 SVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQP-TLVSSLYG 288

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQ 212
             VV +A G  + LAL        ++S G G  G+LGHGS ++ +  P+ ++ F  +++ 
Sbjct: 289 HVVVAVALGGGHSLALT---KAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFF--VDMP 343

Query: 213 PVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAIHVA 269
            ++ ++AG +H+     DG V  WG   YG LG G+ +    ++P+ +     ++   ++
Sbjct: 344 KIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTIS 403

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLG 296
            G   T  ++ D  +YS+GCG    LG
Sbjct: 404 CGFQHTVALTSDNTIYSWGCGLGGRLG 430



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 11/250 (4%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R++   AGA R  +I  +G ++ +G+   G   +G   T+    P LV SL    VV  A
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVA 295

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHT-EPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           +G   +  L++ G ++++  G + +LGH + +   + P  L   ++   ++ I+AG  + 
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS 355

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +A   Q    +VY+ G    G LG G   D     P+ I   + +  +   ++ G  H  
Sbjct: 356 VA---QLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFK--TISCGFQHTV 410

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
            +  D  + +WG G  G LG  NE+ +  P +   + + + +  + G+ +T V+ +   V
Sbjct: 411 ALTSDNTIYSWGCGLGGRLGTFNEKNQCAP-IACNIPNYQPVVFSAGEISTIVIGKKNTV 469

Query: 285 YSFGCGESAS 294
            +   G +++
Sbjct: 470 VATSSGLTST 479



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 7/202 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G  ++  A G G ++ ++ AG+++++G+   G+  +G   ++ +   QL   
Sbjct: 280 PTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFF 339

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPV 156
           +    ++  + G + +     +G VY +   +   LG   ++   +     +     I  
Sbjct: 340 VDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRF 399

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             I+ G+ + +AL    S   +YS GCGLGG+LG  +  ++  P       + N QPVV 
Sbjct: 400 KTISCGFQHTVALT---SDNTIYSWGCGLGGRLGTFNEKNQCAPIAC---NIPNYQPVVF 453

Query: 217 AAGAWHAAVVGQDGRVCTWGWG 238
           +AG     V+G+   V     G
Sbjct: 454 SAGEISTIVIGKKNTVVATSSG 475


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 118/222 (53%), Gaps = 22/222 (9%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G   T    P+L+E    +
Sbjct: 374 LQEKSIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGV 430

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G + +WG    G LG G+   E  P +++AL++ K   +A
Sbjct: 431 PL--VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLA 488

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T ++++DG V++FG G+   LGHN+          N L P+LVT L     RV Q
Sbjct: 489 CGGSHTALLTKDGLVFTFGAGKYGQLGHNST--------QNELRPRLVTEL--AGNRVTQ 538

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLGIELVNNQ 370
           ++      W  HT A +++ GK+++FG+G +GQLG    +NQ
Sbjct: 539 VACGR---W--HTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQ 575



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 24/256 (9%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           + ++I     GA   +++S  G+ +        E  Y ++  +     Q +   K+I  +
Sbjct: 335 KKMKIHSVDQGAEHMLILSSDGKPF--------EYNYSIEHARF----QCILQEKSI--I 380

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           Q   G++ +  LS+ G +  F+WG +   +LG       +    L+  L  +P+VQI+AG
Sbjct: 381 QITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + +AL+   SG  +YS G    G+LG G    E  P LIE   L N +   +A G  H
Sbjct: 439 KAHSMALSM--SG-NIYSWGRNDLGQLGLGHTNGEDFPSLIE--ALDNQKVEFLACGGSH 493

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSED 281
            A++ +DG V T+G G+YG LGH + + E  P++V  L   +   VA G + T   VS+ 
Sbjct: 494 TALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL 553

Query: 282 GDVYSFGCGESASLGH 297
           G V+SFG G+   LG+
Sbjct: 554 GKVFSFGSGKEGQLGN 569



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G   T + T PQLVE L  + +
Sbjct: 374 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPT-PQLVEHLSGVPL 432

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG 162
           VQ + G   +  LS  G +Y++   +  +LG  HT   D     L+  L+N  V  +A G
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFP--SLIEALDNQKVEFLACG 490

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   L     G+ V++ G G  G+LGH S  +E  PRL+   +L   +   VA G WH
Sbjct: 491 GSHTALLT--KDGL-VFTFGAGKYGQLGHNSTQNELRPRLVT--ELAGNRVTQVACGRWH 545

Query: 223 A-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             A V   G+V ++G G+ G LG+G    + +P
Sbjct: 546 TLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 578



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 5/156 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ ++Q +AG   +M +S +G +Y++G++  G+   G+  T     P L+E
Sbjct: 420 TPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQ--LGLGHTNGEDFPSLIE 477

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   TA+L+++G V+TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 478 ALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPR-LVTELAGNRV 536

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
            Q+A G  + LA         V+S G G  G+LG+G
Sbjct: 537 TQVACGRWHTLAYVSDLG--KVFSFGSGKEGQLGNG 570



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 9/128 (7%)

Query: 27  RNLLGR----EVNGT--PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           RN LG+      NG   P    +L   ++   A G   T L++  G V+ FG   +G+  
Sbjct: 456 RNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ-- 513

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEP 139
            G   T+    P+LV  L    V Q A G + T A +S  G+V++F  G + +LG+    
Sbjct: 514 LGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTH 573

Query: 140 NDVEPHPL 147
           N + P P+
Sbjct: 574 NQLIPLPM 581


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 47/332 (14%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYT 124
           G VYA+G + FG+       T  V +  L  ++ N I + Q A G+  +  ++ E     
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIA-EQPYGV 155

Query: 125 FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA----- 177
           +SWG +   +LGH  + N  +P  LL  + +      +  +  ++A   Q S +      
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQP-TLLSNIGSGSGSGNSISFS-MVACGSQHSMIVSNYGE 213

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           +Y+ GCG  G+LGHG    +  P  +    L+    V VAAG  H++ V  +G++ +WGW
Sbjct: 214 LYTFGCGTTGRLGHGDEQPKFKPTPVSS--LVGKSIVSVAAGVMHSSCVDSNGKIYSWGW 271

Query: 238 GRYGCLGHGNEECESVPKVVQ----ALNDVKA------------IHVATGDYTTFVVSED 281
            RYG LG+G+ + +++P   +     L+D++             I V  G   T  +S  
Sbjct: 272 NRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSS 331

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G+V  FG      LG+       GN H + L P  +    + NE V+ I+   S Y+  H
Sbjct: 332 GEVVGFGFNACGQLGN-------GN-HMDQLYPVKI----EFNEHVIDIA---SGYY--H 374

Query: 342 TFALTESGKLYAFGAGDKGQLGI-ELVNNQTE 372
           +  LT++G+ Y++G    G LG+ E+  +QT+
Sbjct: 375 SLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTK 406



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 62/375 (16%)

Query: 47  IRIIQAAAGAGRTMLISDAGQ-VYAFGKDSFGEAEYGVQ-----GTKLVTSPQLVESLKN 100
           I I Q A G   ++ I++    VY++G + +G+  +G Q      T L        S  +
Sbjct: 133 IIIKQIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNS 192

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           I     A G+  + ++S  G +YTF  G   RLGH  E    +P P + +L    +V +A
Sbjct: 193 ISFSMVACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTP-VSSLVGKSIVSVA 251

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE--------KHPRLIE------QF 206
           AG   ++  +C  S   +YS G    G+LG+GS   +        ++P+L +      Q 
Sbjct: 252 AG---VMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQH 308

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L+ L  + V  G  H   +   G V  +G+   G LG+GN   +  P  ++    V  I
Sbjct: 309 HLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFNEHV--I 366

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN---------RHANVLTPQLV 317
            +A+G Y +  ++++G+ YS+G     SLG   +   Q           RH    +    
Sbjct: 367 DIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIRHCFTDSNDAF 426

Query: 318 ----------TSLKQVNERVVQISLTNSI----------YWNAHTFALTESGKLYAFGAG 357
                     T+ + +++  + +S   S+           WN+    +T SGKL+ FG G
Sbjct: 427 NEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAI--ITSSGKLFCFGFG 484

Query: 358 DKGQLGIELVNNQTE 372
           D  + G     NQ+E
Sbjct: 485 DTYRNG-----NQSE 494



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 31/222 (13%)

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHA-AVVGQDGR 231
           G  VY+ G    G+ G  +    K P  I  F  ++ + ++  +A G  H+ A+  Q   
Sbjct: 96  GGLVYAWGYNYFGQCGDKTNQTIKVPTSI-LFPTIDNKIIIKQIACGDSHSLAIAEQPYG 154

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH-------VATGDYTTFVVSEDGDV 284
           V +WG  R+G LGHG++   + P ++  +              VA G   + +VS  G++
Sbjct: 155 VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           Y+FGCG +  LGH    D Q         P  V+SL  V + +V ++         H+  
Sbjct: 215 YTFGCGTTGRLGH---GDEQPK-----FKPTPVSSL--VGKSIVSVAAGV-----MHSSC 259

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQT-----ERGNPERVDI 381
           +  +GK+Y++G    GQLG   V +QT     +  NP+  DI
Sbjct: 260 VDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDI 301



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 114/301 (37%), Gaps = 68/301 (22%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQL-- 94
           P    SL G  I+  AAG   +  +   G++Y++G + +G+   G V+   L T P+   
Sbjct: 236 PTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQN 295

Query: 95  -----------VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
                         L  +  ++   G   T  LS  G V  F +    +LG+    + + 
Sbjct: 296 PKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLY 355

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRL 202
           P   +    N  V+ IA+GY + L   C       YS G    G LG G   T +  P+L
Sbjct: 356 P---VKIEFNEHVIDIASGYYHSL---CLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKL 409

Query: 203 --------------------------------IEQFQLLNLQPV-------VVAAGAWHA 223
                                           I+Q +L   +         +++AGAW++
Sbjct: 410 IPLVHIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNS 469

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           A++   G++  +G+G     G+ +E  + +P +V+            G    F + ED D
Sbjct: 470 AIITSSGKLFCFGFGDTYRNGNQSEFDQDMPIIVEP--------TKWGLERPFNIKEDTD 521

Query: 284 V 284
           +
Sbjct: 522 I 522


>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
          Length = 289

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 16/269 (5%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTM---LISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +V G  L+   L    +   A   G T    +++D+G+V  +G+  +GE        K V
Sbjct: 12  DVVGAGLFGECLSPPDLAFVAVDGGDTFTVGVVADSGEVVGWGRAFYGELPADSAVGKGV 71

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            + Q+ E    +     A G+     L+  GRV  + W   A+       + V    ++ 
Sbjct: 72  VTLQVSERCSAV-----ACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVE 126

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 208
               + +VQ+AAG  + LAL    S   V++ GC   G+LG  S  + +H PR +     
Sbjct: 127 FPTPVQIVQVAAGGMHSLAL---DSSGGVWAWGCNEFGQLGINSEVETQHSPRRVALSAE 183

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAI 266
           + ++ +  AAG  H+A+V   G V T+GWG Y  LGHG+ + E  P VV AL   D +A+
Sbjct: 184 IRVRDI--AAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAV 241

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASL 295
            VA G++ T  ++  GD+Y++G G+   L
Sbjct: 242 QVACGNWHTAALTASGDLYTWGWGKDGQL 270



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 14/153 (9%)

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVA 269
           +Q V VAAG  H+  +   G V  WG   +G LG  +E E +  P+ V    +++   +A
Sbjct: 131 VQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINSEVETQHSPRRVALSAEIRVRDIA 190

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + +VS  G+V++FG G    LGH +          N + P +V +L+ V+   VQ
Sbjct: 191 AGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQ--------NEVEPVVVDALQGVDSEAVQ 242

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           ++  N   W  HT ALT SG LY +G G  GQL
Sbjct: 243 VACGN---W--HTAALTASGDLYTWGWGKDGQL 270



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 7/175 (4%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
           G +V   P        ++I+Q AAG   ++ +  +G V+A+G + FG+     +  +   
Sbjct: 115 GEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINSE-VETQH 173

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           SP+ V     I V   A G   +A++S  G V+TF WG   +LGH +  N+VEP  ++  
Sbjct: 174 SPRRVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEP-VVVDA 232

Query: 151 LENI--PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           L+ +    VQ+A G  +  AL        +Y+ G G  G+L    R    H R +
Sbjct: 233 LQGVDSEAVQVACGNWHTAALTASGD---LYTWGWGKDGQLVRPWRPRHLHVRAL 284



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI--FVV 104
           IR+   AAG   + L+S +G+V+ FG   + +  +G   T+    P +V++L+ +    V
Sbjct: 184 IRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHG--STQNEVEPVVVDALQGVDSEAV 241

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           Q A GN+ TA L+  G +YT+ WG D +L     P  +    L+
Sbjct: 242 QVACGNWHTAALTASGDLYTWGWGKDGQLVRPWRPRHLHVRALI 285



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 15/158 (9%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYT 274
           VA G+ H   +   GRV  WGW           E+   VP VV+    V+ + VA G   
Sbjct: 83  VACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMH 142

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  +   G V+++GC E   LG N+  + Q        +P+ V    ++  R +      
Sbjct: 143 SLALDSSGGVWAWGCNEFGQLGINSEVETQ-------HSPRRVALSAEIRVRDIAAGW-- 193

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
                AH+  ++ SG+++ FG G   QLG     N+ E
Sbjct: 194 -----AHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVE 226


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 128/280 (45%), Gaps = 27/280 (9%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +E    I + Q A+G     V++ E  VYT+  G+  +LGH       +P  ++  L+  
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPE-MVEALKGK 693

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            +V+   G  + + ++       V + G G  G LGHG       PRLIE   LL++   
Sbjct: 694 SIVRACCGDGFSVFVS---DNGIVMTCGDGSNGCLGHGDWMSASRPRLIEP--LLSVDVR 748

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            ++ G  H   VG DG V  WG G++GCLG G+EE    P+ VQ    V    V  G   
Sbjct: 749 AISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDG 808

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA--NVL---------TPQLVTSLKQV 323
           T  +++ G V + G  E+  LG N     QG   A  N+L          P +V +L   
Sbjct: 809 TMFLTDMGSVLACGNNENNKLGLN---HRQGFLRAMKNLLQKVEVPGRKVPTVVRAL--T 863

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           N R + +++        HT  L E GK+Y FG   +GQLG
Sbjct: 864 NHRAIDMAV-----GPHHTSVLVEPGKVYTFGRNLEGQLG 898



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VA G  H  VV  +  V TWG G  G LGHG+    S P++V+AL     +    GD  +
Sbjct: 646 VAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRACCGDGFS 705

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             VS++G V + G G +  LGH                P+L+  L  V+ R +       
Sbjct: 706 VFVSDNGIVMTCGDGSNGCLGHGDWMSAS--------RPRLIEPLLSVDVRAISCG---- 753

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
                H  A+   G+++A+G G  G LG+    ++ +  +P+ V I
Sbjct: 754 ---PHHVVAVGSDGEVFAWGRGKHGCLGL---GDEEDHFSPQEVQI 793



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 25/269 (9%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  +LLGR     P    +L+G  I++A  G G ++ +SD G V   G  S G   +G  
Sbjct: 674 GHGDLLGR---SKPEMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDW 730

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
            +   + P+L+E L ++ V   + G      +  +G V+ +  G    LG   E +   P
Sbjct: 731 MS--ASRPRLIEPLLSVDVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSP 788

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRL 202
             +  + E + + ++  G    + L    S   V + G     KLG   R         L
Sbjct: 789 QEVQIS-EPVFIREVKCGVDGTMFLTDMGS---VLACGNNENNKLGLNHRQGFLRAMKNL 844

Query: 203 IEQFQ------------LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           +++ +            L N + + +A G  H +V+ + G+V T+G    G LG G+ + 
Sbjct: 845 LQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKP 904

Query: 251 ESVPKVVQ--ALNDVKAIHVATGDYTTFV 277
              P  V+  +++D     +A GD  T V
Sbjct: 905 RDAPMEVKDLSISDKTVTMLACGDMFTAV 933


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 158/322 (49%), Gaps = 36/322 (11%)

Query: 56  AGRT-MLIS----DAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQL-VESLKNIFVVQAA 107
           AGRT  L+S    D  ++++ G++++GE   G     +KL   P    +++++I     A
Sbjct: 454 AGRTERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDI-----A 508

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--GYCY 165
            GN   AV+ ++G V+T       + G+ T    V     +  L  I +  +AA  G  +
Sbjct: 509 GGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEH 568

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAA 224
           +LA+A   S  AVYS G    G+LG GS   + H PR+I+  +         A    H+A
Sbjct: 569 MLAVA---SDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE-KYHITTAAVSYHHSA 624

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           VV  +G +  +G    G LG  + + +  P++V +L+      VA G Y T  ++  G+V
Sbjct: 625 VVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684

Query: 285 YSFGCGESASLGHNAIADGQGNRHA-NVLTPQLV-TSLKQVNERVVQISLTNSIYWNAHT 342
           YSFG  +   LG           HA N+  P LV TSL + +E++V +S     Y+  HT
Sbjct: 685 YSFGKNDYGQLGLG---------HARNMKVPTLVKTSLGESDEKIVAVSCG---YY--HT 730

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
             ++E GKL  +G  D GQLGI
Sbjct: 731 VTISEKGKLITWGRNDYGQLGI 752



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 17/304 (5%)

Query: 32  REVNGTPLYCRSLQGIRI--IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           R +  TP+  R+L GI I  + AA G    + ++  G VY++G +  G+   G   +K  
Sbjct: 542 RVIIATPV--RALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSH 599

Query: 90  TSPQLVESLKNIF-VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           T P++++SL+  + +  AA+    +AV+S  G +  F   +  +LG     +   P  L+
Sbjct: 600 T-PRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQ-LV 657

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QFQ 207
            +L +  + ++A G  + +A+    SG  VYS G    G+LG G   + K P L++    
Sbjct: 658 DSLSSQVITEVACGLYHTIAIT---SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLG 714

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
             + + V V+ G +H   + + G++ TWG   YG LG G+++ ++  + V      K   
Sbjct: 715 ESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKT 774

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
            + G Y T ++  +G V  FG      LG    A  +    A++  P    SL   N+ V
Sbjct: 775 ASCGCYHTLILMSNGRVMVFGRNNKGQLG----AGSRTLPSADLPLPVPSNSL--ANDEV 828

Query: 328 VQIS 331
           V+I+
Sbjct: 829 VRIA 832


>gi|145479297|ref|XP_001425671.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392743|emb|CAK58273.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 33/261 (12%)

Query: 125 FSWG-NDARLGH----HTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
           F+WG ++  LG+      +   V+ P  + G   N+  VQ+   +  L+      S   +
Sbjct: 16  FTWGQSNGSLGYAVGSQQQVKGVQMPQLVAGFNNNVAQVQMGQNHSALIT-----SDGEL 70

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           Y+ G G  G+LGH +  D   P+L+E F   NL+   VA G +H   +  DG V TWG+G
Sbjct: 71  YTWGTGNSGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTVALTHDGDVWTWGYG 130

Query: 239 -------------RYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDV 284
                        + G LGHG+ +    P  V+AL  +K I HV +G   T  ++E+ ++
Sbjct: 131 GKEQNFMMDLLFLQVGALGHGDSKNRYTPTPVKALRTLKKIQHVQSGLRFTNAINENNEL 190

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           Y +G G+    G     DG  N+  N+  P+     +   +++  +S+      N ++ A
Sbjct: 191 YVWGKGDYGVFG-----DGN-NKSYNI--PKRNEFFEDYLKKIQNLSIVKLKSCNNYSMA 242

Query: 345 LTESGKLYAFGAGDKGQLGIE 365
           L   G LY +G+ D GQ+G +
Sbjct: 243 LMSDGHLYGWGSNDFGQMGTK 263



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 29/262 (11%)

Query: 58  RTMLISDAGQVYAFGKD--SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           R  L S  G ++ +G+   S G A    Q  K V  PQLV    N  V Q  +G   +A+
Sbjct: 6   RRYLFS-TGSLFTWGQSNGSLGYAVGSQQQVKGVQMPQLVAGFNNN-VAQVQMGQNHSAL 63

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 174
           ++ +G +YT+  GN  +LGH+ + +   P  +   T  N+ V Q+A G  + +AL     
Sbjct: 64  ITSDGELYTWGTGNSGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTVALTHDGD 123

Query: 175 GMAVYSVGCGLG-------------GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
              V++ G G               G LGHG   +   P  ++  + L  +   V +G  
Sbjct: 124 ---VWTWGYGGKEQNFMMDLLFLQVGALGHGDSKNRYTPTPVKALRTLK-KIQHVQSGLR 179

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-------VVQALNDVKAIHVATGDYT 274
               + ++  +  WG G YG  G GN +  ++PK        ++ + ++  + + + +  
Sbjct: 180 FTNAINENNELYVWGKGDYGVFGDGNNKSYNIPKRNEFFEDYLKKIQNLSIVKLKSCNNY 239

Query: 275 TFVVSEDGDVYSFGCGESASLG 296
           +  +  DG +Y +G  +   +G
Sbjct: 240 SMALMSDGHLYGWGSNDFGQMG 261



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 37/259 (14%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQA 106
           + Q   G   + LI+  G++Y +G  + G+   G    K   +PQLVE     N+ V Q 
Sbjct: 51  VAQVQMGQNHSALITSDGELYTWGTGNSGQL--GHNNDKDYNTPQLVEFFTKHNLKVKQV 108

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDAR-------------LGHHTEPNDVEPHPL--LGTL 151
           A+G++ T  L+ +G V+T+ +G   +             LGH    N   P P+  L TL
Sbjct: 109 ALGDYHTVALTHDGDVWTWGYGGKEQNFMMDLLFLQVGALGHGDSKNRYTPTPVKALRTL 168

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ---- 207
           + I  VQ  +G  +  A+        +Y  G G  G  G G+      P+  E F+    
Sbjct: 169 KKIQHVQ--SGLRFTNAIN---ENNELYVWGKGDYGVFGDGNNKSYNIPKRNEFFEDYLK 223

Query: 208 -LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN----EECESVPKVVQALND 262
            + NL  V + +   ++  +  DG +  WG   +G +G  N    E  E+V    Q L D
Sbjct: 224 KIQNLSIVKLKSCNNYSMALMSDGHLYGWGSNDFGQMGTKNEIGVEIYETVNFPTQGLRD 283

Query: 263 VKAIHVATGDYTTFVVSED 281
                        F V+ED
Sbjct: 284 ----KFGDNKIVDFFVAED 298


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 25/319 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP      Q   + QAA G   T+L++  G++Y  G +  G+  +          PQ + 
Sbjct: 26  TPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLP-NKRPQFIS 84

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           +L+N  V Q + G   +  L+  G++  FSWG++A  +LGH  +        ++ ++   
Sbjct: 85  ALENYIVTQVSCGLSHSLALTNWGQL--FSWGSNATGQLGHDLDMVSYPAPRMIKSIATK 142

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VVQI+ G+ + LAL    +   +++ G    G+LG G+ T +K P       L  +   
Sbjct: 143 TVVQISCGHSHCLALT---NSGELFAWGANEYGQLGLGT-TGKKVPTATLVKSLAGIPIA 198

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            +A G  H+  V + G +  WG   +G LG  + +    P  ++ L  +   +++ GD  
Sbjct: 199 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDF 258

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  ++++G V++ G G    LGH          H N + P++V  L  +  ++ QI+   
Sbjct: 259 SVFLTQEGGVFTCGLGTFGQLGHGT--------HGNEILPRMVFEL--MGSKITQIACGR 308

Query: 335 SIYWNAHTFALTES-GKLY 352
                 HT A   S GK+Y
Sbjct: 309 K-----HTLAFVPSRGKVY 322



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 24/299 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G    GE   G    + V +P+ ++  +   V QAA G   T +L+++G++YT   
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH T     +    +  LEN  V Q++ G  + LAL    +   ++S G    G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT---NWGQLFSWGSNATG 119

Query: 188 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LGH         PR+I+      +  V ++ G  H   +   G +  WG   YG LG G
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTV--VQISCGHSHCLALTNSGELFAWGANEYGQLGLG 177

Query: 247 NEECESVP--KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
               + VP   +V++L  +    +A G   +F VS+ G ++ +G      LG N +    
Sbjct: 178 TTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---- 232

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +   P  + +L+ +  R +      S++       LT+ G ++  G G  GQLG
Sbjct: 233 ----DSRCYPTQLKTLRSLGVRYISCGDDFSVF-------LTQEGGVFTCGLGTFGQLG 280



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 235 WGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           WG   +G LG G  E E V  P+ +           A G   T ++++DG +Y+ G  + 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH+   +   N+      PQ +++L+  N  V Q+S   S     H+ ALT  G+L+
Sbjct: 66  GQLGHDT--NNLPNKR-----PQFISALE--NYIVTQVSCGLS-----HSLALTNWGQLF 111

Query: 353 AFGAGDKGQLGIEL 366
           ++G+   GQLG +L
Sbjct: 112 SWGSNATGQLGHDL 125


>gi|406602412|emb|CCH46028.1| Regulator of chromosome condensation [Wickerhamomyces ciferrii]
          Length = 476

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 160/362 (44%), Gaps = 73/362 (20%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--------------------- 87
           I+  A G   T+ + D  QV+++G +  G         K                     
Sbjct: 86  IVDFAVGGMHTLALDDKNQVWSWGGNDSGVLGRDTSKVKEQLKDMDDAGSDDDEDGDLNE 145

Query: 88  LVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDV 142
             ++P LVE L K++ VVQ A  +  +AVL   G VY  +WG    N+  LG     ND+
Sbjct: 146 AESTPGLVEGLPKDLKVVQLAATDNLSAVLLENGEVY--AWGTFRCNEGILGFK---NDI 200

Query: 143 EPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
                   ++    + Q+A+G  ++L L  +     V++ G G   +LG          R
Sbjct: 201 TKQSTPVKIDEFKEITQLASGKDHILGLDTKG---VVFAWGNGQQLQLGR---------R 248

Query: 202 LIEQFQLLNLQP--------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-- 251
           + E+ +L  L+P        V +++G +H   + +DG+V TWG  +YG  G  +E  +  
Sbjct: 249 ISERNKLKTLEPREFGLADVVYISSGEFHCFAITKDGKVLTWGLNQYGQCGVSSELEDGS 308

Query: 252 --SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-------HNAIAD 302
             SVP  V+ L D K + +A G++ T  +SEDG VY+FG  +   +G        +   D
Sbjct: 309 LISVPTEVEDLADKKIVQIAAGEHHTLALSEDGSVYAFGRIDMFEIGIAKKDLPESTFRD 368

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
             GN  + V  P  + +L +           N    + H+ A+TE G ++A+G G+   +
Sbjct: 369 VHGNARS-VPVPTKIPNLPKTR---------NIAVGSHHSLAITEDGVVFAWGFGETYAI 418

Query: 363 GI 364
           G+
Sbjct: 419 GL 420



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 24  NGKRNLLGREVNG----TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE- 78
           NG++  LGR ++       L  R      ++  ++G      I+  G+V  +G + +G+ 
Sbjct: 239 NGQQLQLGRRISERNKLKTLEPREFGLADVVYISSGEFHCFAITKDGKVLTWGLNQYGQC 298

Query: 79  -AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
                ++   L++ P  VE L +  +VQ A G   T  LS +G VY F
Sbjct: 299 GVSSELEDGSLISVPTEVEDLADKKIVQIAAGEHHTLALSEDGSVYAF 346


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L ++ G+VY +G +++ +   G     LV   Q+  
Sbjct: 106 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPC-QVST 164

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G+  + VL+ +G VYT+ + N  ++G  +  N   P  +   L+N  V
Sbjct: 165 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV 224

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q   V
Sbjct: 225 VNIACG--QMCSMAVVENG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQR--V 279

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D V  I      +T+
Sbjct: 280 ACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTS 339

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 340 AAKTQSGQVYMWGQCRGQSVVLPH 363



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 195

Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 255

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 256 LGS--------SGNQPTPCRIAALQGIRVQRVACGC-------AHTLVLTDEGQIYAWGA 300

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V +D
Sbjct: 301 NSYGQLG---TGNKSNQSYPTTVTVD 323



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 18/169 (10%)

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E+ +L+  Q  V  +       V ++  V   G    GCLG G+ +    PK + +L   
Sbjct: 57  EELKLIR-QACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGK 115

Query: 264 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 321
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +  ++  Q+ T+L 
Sbjct: 116 KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGLVPCQVSTNL- 166

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 167 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 209



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G +  +  + P  V 
Sbjct: 264 TPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ--SYPTTVT 321

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWG 128
             K+  +  AA  +  T A  ++ G+VY   WG
Sbjct: 322 VDKDRVIEIAACHSAHTSAAKTQSGQVYM--WG 352


>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP  V  +++     
Sbjct: 203 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSR-IRMVSSPHPVPCVESSSYGK 261

Query: 102 -----------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                                  +V   A G   +AV++  G +  F WG   + G  + 
Sbjct: 262 ERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGST 321

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P   + +L  I + ++AAG   L    C  +   VY+ G    G+LG G    E 
Sbjct: 322 DDELSPT-CVSSLLGIQIERVAAG---LWHTVCISADGDVYTFGGNQFGQLGTGVDQPET 377

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   L N    +V+ GA H+A++  DG++ +WGW +YG LG G+    ++P  V 
Sbjct: 378 LPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV- 436

Query: 259 ALNDVKAIHVATGDYTTFVVSE 280
            L+     +VA G + T +++E
Sbjct: 437 TLDGCTPKNVACGWWHTLLLAE 458



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 68/330 (20%)

Query: 72  GKDSFGEAEYGVQGTKLVTSPQLVESLKN----------------IFVVQAAIGNFFTAV 115
           G DS G  E   +  ++++S Q  ES                   + +   A G   T  
Sbjct: 159 GTDSKGGGEESTKRRRMLSSKQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLA 218

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           LS  G+V+ + +G + +LG  +    V  PHP       +P V+ +              
Sbjct: 219 LSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHP-------VPCVESS-------------- 257

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
                S G      L  G+ + E      +  ++       +A G  H+AV+   G +  
Sbjct: 258 -----SYGKERSSALARGNVSTEG-----QSLRVPGSYVKWIACGGRHSAVITDAGALLM 307

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +GWG YG  G G+ + E  P  V +L  ++   VA G + T  +S DGDVY+FG  +   
Sbjct: 308 FGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQ 367

Query: 295 LGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
           L       G G      L P+L+   SL+  + ++V            H+  +T  GK++
Sbjct: 368 L-------GTGVDQPETL-PRLLDAPSLENAHAKIVSCGAR-------HSAIITADGKMF 412

Query: 353 AFGAGDKGQLGIELVNNQTERGNPERVDID 382
           ++G    GQLG+    +  +R  P +V +D
Sbjct: 413 SWGWNKYGQLGL---GDVVDRNIPSQVTLD 439



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I + AAG   T+ IS  G VY FG + FG+   GV   +  T P+L++
Sbjct: 326 SPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPE--TLPRLLD 383

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL+N      + G   +A+++ +G+++++ W    +LG     +   P  +  TL+  
Sbjct: 384 APSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV--TLDGC 441

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 442 TPKNVACGWWHTLLLAESPT 461



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 30/193 (15%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN 247
           LG    T  KH    E F L     +V AA  W H A V ++G V TWGW          
Sbjct: 59  LGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGW---------- 108

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
           +EC    KV    +   ++     +  +  ++E   V     G  ++ G  +  D +G  
Sbjct: 109 KECVPSGKVFGDPSVGGSLEKDVFERQSSFLTE--QVSPRTQGSRSTAGGVSGTDSKGGG 166

Query: 308 HANVLTPQLVTSLKQVNERVV----------------QISLTNSIYWNAHTFALTESGKL 351
             +    ++++S KQ  E                    + + N      HT AL++ G++
Sbjct: 167 EESTKRRRMLSS-KQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQV 225

Query: 352 YAFGAGDKGQLGI 364
           + +G G +GQLG+
Sbjct: 226 WGWGYGGEGQLGL 238


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 34/259 (13%)

Query: 116  LSREGRVYTFSWGNDAR--------LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            L R G +YT  WG   +        +  H+ P+   P  LL   + + V+ +A G  +  
Sbjct: 837  LIRNGTIYT--WGQTVKGCLGQGPTMSRHSLPS---PISLLNCFK-LEVLYVACGKNHTT 890

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            AL    +   VY+ GC   G+LG G   +  +PRLI    L N   + ++ G +H   + 
Sbjct: 891  AL----TNNGVYAWGCSKYGQLGLGDVYESPYPRLITS--LANENVITLSCGQFHTLALT 944

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            + G+V  WGWG +G LG GN + + +P  V  L D     +A G   + V+S+ G ++SF
Sbjct: 945  EKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSF 1004

Query: 288  GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT--NSIYWNAHTFA- 344
            G G    LG             N     +   ++ ++E+++ I+    +SI    H  A 
Sbjct: 1005 GSGVFGQLG-----------TGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSAL 1053

Query: 345  LTESGKLYAFGAGDKGQLG 363
            LT SG +Y +G    GQLG
Sbjct: 1054 LTVSGGVYTWGRSLDGQLG 1072



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 23/282 (8%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            G+   + R    +P+   +   + ++  A G   T  +++ G VYA+G   +G+   G+ 
Sbjct: 855  GQGPTMSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQ--LGLG 911

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
                   P+L+ SL N  V+  + G F T  L+ +G+V+ + WG   +LG     +   P
Sbjct: 912  DVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLP 971

Query: 145  HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
               +  L++  +  IAAG+ + L L+ +     ++S G G+ G+LG G+ T    P LI 
Sbjct: 972  -VCVNHLKDQVIKDIAAGHGHSLVLSDKGQ---IFSFGSGVFGQLGTGNTTKSSVPVLI- 1026

Query: 205  QFQLLNLQPVVVAAGAW--------HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
              Q ++ + +++A G +        H+A++   G V TWG    G LG+G  +  + P  
Sbjct: 1027 --QGISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQ 1084

Query: 257  VQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGH 297
            +   N  KA  ++ G ++T     + G ++ +G   S S+G 
Sbjct: 1085 INE-NTFKADCISCGCEFTAAQEKQTGKIFCWG---SNSVGQ 1122



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 20/159 (12%)

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALN--DVKAIHVATG 271
           V+  G  H A++ ++G + TWG    GCLG G      S+P  +  LN   ++ ++VA G
Sbjct: 827 VLNCGYGHTALI-RNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACG 885

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T  ++ +G VY++GC +   LG   + +           P+L+TSL   NE V+ +S
Sbjct: 886 KNHTTALTNNG-VYAWGCSKYGQLGLGDVYESP--------YPRLITSL--ANENVITLS 934

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                    HT ALTE G+++A+G G  GQLG+  +++Q
Sbjct: 935 CGQ-----FHTLALTEKGQVFAWGWGVHGQLGLGNIDDQ 968


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 35/358 (9%)

Query: 26  KRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           K++ L  E N +P    S++   +     G G ++       ++A+GK+  GE  +G Q 
Sbjct: 507 KQSHLKDERNLSPNNISSMKSSNVNVQNEGQGNSI----KCYIFAWGKNESGELSFGNQK 562

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEP 144
                 P+  ++L  I++ Q +     +A +S  G +Y        +LG       ++  
Sbjct: 563 QPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINK 622

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             ++   + I V+Q+A G  + LAL        VYS G  L  K+G  S      P  I+
Sbjct: 623 FQMIPIFKGIKVLQVACGDYHTLALT---DTDQVYSWGGTLHKKVGQRSGK----PAPIQ 675

Query: 205 QFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWG----RYGCLGHGNEECESVPKVVQA 259
           Q   LN + V+ V  G +H+A + Q+G + TWG G      G LG G+ +    P+ ++ 
Sbjct: 676 Q---LNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKF 732

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP-QLVT 318
               K + V+ G + T  ++ + +++ +G GE   LG         ++H    TP ++  
Sbjct: 733 FEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELG--------TSKHE--YTPIRVKV 782

Query: 319 SLKQVNERVVQISLTNSIY----WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +  Q N     I   NSI        HT  LT +G +Y+ G G +GQLG+    NQ E
Sbjct: 783 NFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCE 840



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 126/269 (46%), Gaps = 30/269 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            +GI+++Q A G   T+ ++D  QVY++G       + G +  K    P  ++ L    V
Sbjct: 629 FKGIKVLQVACGDYHTLALTDTDQVYSWG--GTLHKKVGQRSGK----PAPIQQLNKKGV 682

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWG------NDARLGH-HTEPNDVEPHPLLGTLENIPV 156
           +Q   G++ +A +++ G +YT  WG      N  +LG  H +  D+E    L   E   +
Sbjct: 683 IQVDCGDYHSAAITQNGDIYT--WGGGGQDYNKGQLGLGHVK--DIENPEKLKFFEGKKI 738

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL--QPV 214
           V+++ G  + +AL    S   ++  G G  G+LG  S+ +    R+   F   N+  + +
Sbjct: 739 VKVSCGQFHTMALT---SENELFGWGAGEFGELG-TSKHEYTPIRVKVNFNQYNILYENI 794

Query: 215 V-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
           +       +  G  H  ++  +G + + G+GR G LG  N E +   ++V  L   K I 
Sbjct: 795 LFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIK 854

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLG 296
           +A G   +  +S+  D+++ G G    LG
Sbjct: 855 IAAGWNHSLALSDQNDIFACGHGARGQLG 883



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 20/231 (8%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQ 93
           G P   + L    +IQ   G   +  I+  G +Y +G     + + + G+   K + +P+
Sbjct: 669 GKPAPIQQLNKKGVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPE 728

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---HHTEPNDVE----PHP 146
            ++  +   +V+ + G F T  L+ E  ++ +  G    LG   H   P  V+     + 
Sbjct: 729 KLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYN 788

Query: 147 LLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           +L   ENI     +  I  G  + L L    +   +YS G G  G+LG  +  ++   +L
Sbjct: 789 IL--YENILFENSIQNIKCGGHHTLLLT---NNGYIYSSGYGRQGQLGLRNSENQCEFQL 843

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           +  + L   + + +AAG  H+  +     +   G G  G LG G+EE  ++
Sbjct: 844 V--WTLTKKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLGDEESRTI 892


>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1190

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 140/320 (43%), Gaps = 36/320 (11%)

Query: 27   RNLLGREVNGT------PLYCRSLQGIRI----IQAAAGAGRTMLISDAGQVYAFGKDSF 76
            RN  GR  +GT      P+  +   G       +Q +AG   ++ +   G  YA+G ++ 
Sbjct: 761  RNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYHHSLALGSDGNAYAWGYNNS 820

Query: 77   GEAEYGVQGTKLVTSPQLVE---SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 133
            G+   G   T   TS ++ +   +  +   VQ + G F +  L  +G  Y +   N  +L
Sbjct: 821  GQLGDGTS-TDRATSVRVKKPAGTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQL 879

Query: 134  GHHTEPNDVEPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            G  T  +   P  +    GT  +    QI AGY + LA+     G A Y+ G    G+LG
Sbjct: 880  GDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGSD--GYA-YAWGYNFSGQLG 936

Query: 191  HGSR----TDEKHPRLIEQFQLLN-----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            + S+    +   +P  +      N     L+ V V AG WH+  +G DG    WG+   G
Sbjct: 937  NNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNG 996

Query: 242  CLGHGNEECESVPKVV-------QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
             LG+ + +  +VP +V            +KA+ V+TG Y +  +  DG+ Y++G      
Sbjct: 997  QLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQ 1056

Query: 295  LGHNAIADGQGNRHANVLTP 314
            LG+N+I  G  N  A    P
Sbjct: 1057 LGNNSIPTGSNNNEARSPVP 1076



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 147/344 (42%), Gaps = 32/344 (9%)

Query: 45  QGIRIIQAAAGA-------GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           +GIR  Q +A +       G ++ +   G  YA+G +  GE   G       ++P +V+ 
Sbjct: 663 RGIRFSQVSASSFVSVTDFGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQ 722

Query: 98  LK---------NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP---H 145
                      +   VQ + G+  +  +  +G  Y +   +D RLG  T  +   P    
Sbjct: 723 PDRKTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVK 782

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
              GT  +   VQ++AGY + LAL    S    Y+ G    G+LG G+ TD      +++
Sbjct: 783 KPAGTSTDFTYVQVSAGYHHSLALG---SDGNAYAWGYNNSGQLGDGTSTDRATSVRVKK 839

Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--- 260
                 +   V V+AGA+H+  +G DG    WG   +G LG G     + P  V      
Sbjct: 840 PAGTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGT 899

Query: 261 -NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
             D     +  G   +  V  DG  Y++G   S  LG+N+   G  + + N +  +   S
Sbjct: 900 PTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKG-GFFSPNPNPVRVRNPAS 958

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               ++ +  +++T + +W  H+ AL   G  YA+G    GQLG
Sbjct: 959 PNDADKGLKAVNVT-AGFW--HSLALGSDGNAYAWGFNSNGQLG 999



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 38/356 (10%)

Query: 50   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLVESLKNIFVVQAA 107
            +Q +AG+  ++ +   G  YA+G++  G    G    +   V   +   +  +   VQ +
Sbjct: 738  VQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVS 797

Query: 108  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYC 164
             G   +  L  +G  Y + + N  +LG  T  +    V      GT  +   VQ++AG  
Sbjct: 798  AGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYVQVSAGAF 857

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI--EQFQLLNLQPVVVAAGAWH 222
            + LAL    S    Y+ G    G+LG G+ TD   P  +        +     + AG  H
Sbjct: 858  HSLALG---SDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLH 914

Query: 223  AAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALND---------VKAIHVATG 271
            +  VG DG    WG+   G LG+ ++       P  V+  N          +KA++V  G
Sbjct: 915  SLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAG 974

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---SLKQVNERVV 328
             + +  +  DG+ Y++G   +  LG+N+  D           P LV+   S    ++ + 
Sbjct: 975  FWHSLALGSDGNAYAWGFNSNGQLGNNSSKDS--------TVPVLVSDSASPTDTSKGLK 1026

Query: 329  QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG---IELVNNQTERGNPERVDI 381
             + ++   Y   H+ AL   G  YA+G    GQLG   I   +N  E  +P  V +
Sbjct: 1027 AVLVSTGQY---HSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPV 1079



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 28/226 (12%)

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQL-------LNLQPVVVA 217
            +LA    G A Y+ G    G+LG G+ ++     P +++Q           +   V V+
Sbjct: 683 FSLAVGSDGNA-YAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVS 741

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP----KVVQALNDVKAIHVATGDY 273
           AG+ H+  VG DG    WG    G LG G    +  P    K      D   + V+ G +
Sbjct: 742 AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYH 801

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  +  DG+ Y++G   S  LG     D    R  +V   +   +    +   VQ+S  
Sbjct: 802 HSLALGSDGNAYAWGYNNSGQLGDGTSTD----RATSVRVKKPAGT--STDFTYVQVSAG 855

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                  H+ AL   G  YA+G  + GQLG       T+R  P +V
Sbjct: 856 -----AFHSLALGSDGNAYAWGLNNFGQLGD---GTSTDRATPVKV 893


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 26/315 (8%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+ I+  G+VY+ G + +G+  +     +L    QL+  L      + A GN
Sbjct: 38  QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRL----QLIPGLDAFVFRKIACGN 93

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             T  ++  G+++++    + +LG ++         ++  L    +VQIA G  + +AL 
Sbjct: 94  CHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT 153

Query: 171 CQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
              +   +Y+ G    G+LG GS  T E  P+ I     + +    +A G +H  V+ + 
Sbjct: 154 ---NDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPI--AFIACGGYHTIVISKS 208

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V +WG   +G LG  + +  ++P  ++ L + K  +   G+  +  ++ DG V++ G 
Sbjct: 209 GAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGA 268

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES- 348
           G    LGH       GN    +L  Q+   ++ +   V QIS         HT AL  S 
Sbjct: 269 GMYGQLGH-------GNTTNEILPRQV---MELMGSTVTQISCGKR-----HTLALVPSR 313

Query: 349 GKLYAFGAGDKGQLG 363
           G++YA+G G  GQLG
Sbjct: 314 GRVYAWGLGGAGQLG 328



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 18/215 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+Q A G   ++ +++ G++YA+G +  G+   G   T  +  P+ + +L  + +   A 
Sbjct: 139 IVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEI-KPKRISTLAAVPIAFIAC 197

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL---LGTLENIPVVQIAAGY 163
           G + T V+S+ G V  FSWG +   +LG     NDV+   L   L TL N  V     G 
Sbjct: 198 GGYHTIVISKSGAV--FSWGRNTFGQLG----LNDVQQRNLPCQLRTLRNAKVCYATCGE 251

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + + L        V++ G G+ G+LGHG+ T+E  PR +   +L+      ++ G  H 
Sbjct: 252 EFSVFLTMDG---GVFTCGAGMYGQLGHGNTTNEILPRQV--MELMGSTVTQISCGKRHT 306

Query: 224 -AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            A+V   GRV  WG G  G LG+   +  + P+VV
Sbjct: 307 LALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 25/273 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           + A G   T+ +++ GQ++++G +  G+     V  T+ V  P++++ L    +VQ A G
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERV--PRMIKVLGTNVIVQIACG 145

Query: 110 NFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
              +  L+ +G +Y  +WG++      LG +T   +++P  +  TL  +P+  IA G  +
Sbjct: 146 TEHSIALTNDGELY--AWGSNREGQLGLGSYT-TTEIKPKRI-STLAAVPIAFIACGGYH 201

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
            + ++   SG AV+S G    G+LG         P  +    L N +      G   +  
Sbjct: 202 TIVIS--KSG-AVFSWGRNTFGQLGLNDVQQRNLPCQLRT--LRNAKVCYATCGEEFSVF 256

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDV 284
           +  DG V T G G YG LGHGN   E +P+ V  L       ++ G  +T  +V   G V
Sbjct: 257 LTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRV 316

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           Y++G G +  LG+ A          +  TPQ+V
Sbjct: 317 YAWGLGGAGQLGNRA--------SQSATTPQVV 341



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
           ++  G  + G+LG G   DE    PR ++  +  N++ +  A G  +   + ++G+V + 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQI--ACGENYTVAITKEGKVYSC 58

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G   YG LGH  E+     +++  L+      +A G+  T  V+E G ++S+GC  +  L
Sbjct: 59  GNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G N++   +         P+++  L      +VQI+         H+ ALT  G+LYA+G
Sbjct: 117 GLNSVDCTER-------VPRMIKVLG--TNVIVQIACGTE-----HSIALTNDGELYAWG 162

Query: 356 AGDKGQLGIELVNNQTERGNPERV 379
           +  +GQLG  L +  T    P+R+
Sbjct: 163 SNREGQLG--LGSYTTTEIKPKRI 184



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 125 FSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           F WG+       LG   + N   P  +   +E   V QIA G  Y +A+  +     VYS
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPREV-DFIEASNVEQIACGENYTVAITKEGK---VYS 57

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
            G    G+LGH      K  +LI        + +  A G  H   V + G++ +WG    
Sbjct: 58  CGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKI--ACGNCHTLAVNEWGQLFSWGCNMN 113

Query: 241 GCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           G LG  + +C E VP++++ L     + +A G   +  ++ DG++Y++G      LG   
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLG--- 170

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
                G+     + P+ +++L  V    +            HT  +++SG ++++G    
Sbjct: 171 ----LGSYTTTEIKPKRISTLAAVPIAFIACG-------GYHTIVISKSGAVFSWGRNTF 219

Query: 360 GQLGIELVNNQTERGNP 376
           GQLG+   N+  +R  P
Sbjct: 220 GQLGL---NDVQQRNLP 233


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 150/341 (43%), Gaps = 38/341 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  ++L    +I   +G   +M +   G V+ +G +  G+   G+     V +P  V 
Sbjct: 75  TPVMAKNLN--HVIDIHSGVRSSMALRQDGTVWTWGANENGQ--LGIGTITNVNAPAQVP 130

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L  I  +   +  +    LS  G V+T+   ++  LG+ T      P  + G  +   V
Sbjct: 131 GLSGIKAISGGLA-YHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD---V 186

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
             IAAG  Y LAL    +   V++ G    G+LG G+ TD   P      Q+  L  V+ 
Sbjct: 187 TAIAAGGYYSLALKSDGT---VWAWGVNGSGELGDGTTTDRHVP-----VQVAGLTDVMA 238

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +AAG  H+  + QDG V  WG   YG LG G     + P  V+ L  + A  VA G Y +
Sbjct: 239 IAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA--VAGGGYHS 296

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V   G+V+S+G      LG N+        +A+ L P  V  ++ V E    IS    
Sbjct: 297 LAVDRAGNVWSWGDNSQQQLGLNS--------NASSLIPVPVPGIEHVRE----ISAG-- 342

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
                H+ A+ + G ++ +G    GQ+G    NN   RG P
Sbjct: 343 ---GFHSVAMKKDGTVWGWGYNSGGQIGDGTYNN--TRGIP 378



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 35/273 (12%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G + TA L   G VY++ +G+  +LG  T   +    P++    N  V+ I +G    +A
Sbjct: 41  GYYHTASLVSSGEVYSWGYGDRGQLGDGTW--NTRTTPVMAKNLN-HVIDIHSGVRSSMA 97

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--AWHAAVV 226
           L    +   V++ G    G+LG G+ T+   P      Q+  L  +   +G  A+H   +
Sbjct: 98  LRQDGT---VWTWGANENGQLGIGTITNVNAPA-----QVPGLSGIKAISGGLAYHGMAL 149

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            ++G V TWG    G LG+G    ++ P +V  L+DV AI  A G Y +  +  DG V++
Sbjct: 150 SENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTAI--AAGGYYSLALKSDGTVWA 207

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G   S  LG     D    RH  V    L          V+ I+   S     H+ A+ 
Sbjct: 208 WGVNGSGELGDGTTTD----RHVPVQVAGLTD--------VMAIAAGGS-----HSLAIK 250

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           + G ++A+G    G LG      +T R  P +V
Sbjct: 251 QDGTVWAWGNNTYGTLGD---GTRTHRTRPVQV 280



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG +H A +   G V +WG+G  G LG G     + P + + LN V  IH  +G  ++
Sbjct: 38  IVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIH--SGVRSS 95

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             + +DG V+++G  E+  LG   I         NV  P  V  L  +       +++  
Sbjct: 96  MALRQDGTVWTWGANENGQLGIGTI--------TNVNAPAQVPGLSGIK------AISGG 141

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + +  H  AL+E+G ++ +G  D G+LG
Sbjct: 142 LAY--HGMALSENGTVWTWGKNDNGELG 167


>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP  V  +++     
Sbjct: 226 GVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLGSR-IRMVSSPHPVPCVESSSYGK 284

Query: 102 -----------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                                  +V   A G   +AV++  G +  F WG   + G  + 
Sbjct: 285 ERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGST 344

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P   + +L  I + ++AAG   L    C  +   VY+ G    G+LG G    E 
Sbjct: 345 DDELSPT-CVSSLLGIQIERVAAG---LWHTVCISADGDVYTFGGNQFGQLGTGVDQPET 400

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   L N    +V+ GA H+A++  DG++ +WGW +YG LG G+    ++P  V 
Sbjct: 401 LPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV- 459

Query: 259 ALNDVKAIHVATGDYTTFVVSE 280
            L+     +VA G + T +++E
Sbjct: 460 TLDGCTPKNVACGWWHTLLLAE 481



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 44/273 (16%)

Query: 72  GKDSFGEAEYGVQGTKLVTSPQLVESLKN----------------IFVVQAAIGNFFTAV 115
           G DS G  E   +  ++++S Q  ES                   + +   A G   T  
Sbjct: 182 GTDSKGGGEESTKRRRMLSSKQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLA 241

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDV-EPHPL-------LGTLENIPV----------- 156
           LS  G+V+ + +G + +LG  +    V  PHP+        G   +  +           
Sbjct: 242 LSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQS 301

Query: 157 VQIAAGYCYLLALACQPSGM-----AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +++   Y   +A   + S +     A+   G GL G+ G GS  DE  P  +    LL +
Sbjct: 302 LRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVS--SLLGI 359

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVA 269
           Q   VAAG WH   +  DG V T+G  ++G LG G ++ E++P+++ A  L +  A  V+
Sbjct: 360 QIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVS 419

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            G   + +++ DG ++S+G  +   LG   + D
Sbjct: 420 CGARHSAIITADGKMFSWGWNKYGQLGLGDVVD 452



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I + AAG   T+ IS  G VY FG + FG+   GV   +  T P+L++
Sbjct: 349 SPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPE--TLPRLLD 406

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL+N      + G   +A+++ +G+++++ W    +LG     +   P  +  TL+  
Sbjct: 407 APSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQV--TLDGC 464

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 465 TPKNVACGWWHTLLLAESPT 484



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 30/193 (15%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN 247
           LG    T  KH    E F L     +V AA  W H A V ++G V TWGW          
Sbjct: 82  LGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGW---------- 131

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
           +EC    KV    +   ++     +  +  ++E   V     G  ++ G  +  D +G  
Sbjct: 132 KECVPSGKVFGDPSVGGSLEKDVFERQSSFLTE--QVSPRTQGSRSTAGGVSGTDSKGGG 189

Query: 308 HANVLTPQLVTSLKQVNERVV----------------QISLTNSIYWNAHTFALTESGKL 351
             +    ++++S KQ  E                    + + N      HT AL++ G++
Sbjct: 190 EESTKRRRMLSS-KQAAESSSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQV 248

Query: 352 YAFGAGDKGQLGI 364
           + +G G +GQLG+
Sbjct: 249 WGWGYGGEGQLGL 261


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 34/332 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   R+L G +I+Q   GA  ++++S+ G V+A+G ++ G  +  ++  K V  P LV+ 
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG--QLCLRELKTVPVPTLVKE 307

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPL---LGTLE 152
           L  I + Q A G   T  L+  G+VY  SWGN+   +LG      D  PH +   L TLE
Sbjct: 308 LYGIPIRQLAAGGRHTLALTFNGQVY--SWGNNQFGQLG----VGDTAPHTIPSRLKTLE 361

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +     IA G  + + L        VYS G G  G+LGHG+  +E +PR+I  F+L+   
Sbjct: 362 HQFCAHIACGEDHSVVLT---ETGGVYSFGAGGQGQLGHGTLQNEINPRMI--FELMGKS 416

Query: 213 PVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKAIH 267
              V  G  H  V   +  ++  +G G  G LG G     ++    P +V+ L+    + 
Sbjct: 417 ASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILR 476

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL------- 320
           +ATG   +   +  G+    G  ESA L  +A    Q ++   VLT  LV  L       
Sbjct: 477 IATGASASHCFAVVGNRNHVGAAESAQLPWDA-RHRQASQSPLVLTLPLVRKLLADAAAS 535

Query: 321 KQVN--ERVVQISLTNSIYWNAHTFALTESGK 350
           K V+   R +Q++L+++   N  +F   E G+
Sbjct: 536 KDVSALTRTLQVALSSASCLNG-SFLAHEPGQ 566



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 146/346 (42%), Gaps = 61/346 (17%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G   T+ + D GQVY+ G +  G+  +    +K    P+ V++L+   + Q A G   
Sbjct: 130 ACGRAHTLFLVD-GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETH 184

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-------------------------- 146
           +  L+  G+V  F+WG++        P++    P                          
Sbjct: 185 SLALTSNGQV--FAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLA 242

Query: 147 ---------LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                    L+  L    +VQI  G  + L L+ +     V++ G    G+L        
Sbjct: 243 YMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGD---VFAWGDNTSGQLCLRELKTV 299

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             P L+++   + ++ +  AAG  H   +  +G+V +WG  ++G LG G+    ++P  +
Sbjct: 300 PVPTLVKELYGIPIRQL--AAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRL 357

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           + L      H+A G+  + V++E G VYSFG G    LGH  +         N + P+++
Sbjct: 358 KTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTL--------QNEINPRMI 409

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             L   +   V     ++I +        ++ K+YAFG G  GQLG
Sbjct: 410 FELMGKSASQVLCGRRHTIVF------FPKTNKIYAFGLGGNGQLG 449



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 154/374 (41%), Gaps = 54/374 (14%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE----- 78
           N +  L  ++    P    +L+   I Q A G   ++ ++  GQV+A+G +   +     
Sbjct: 150 NDQGQLGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTP 209

Query: 79  AEYGVQGT---------------------------KLVTSPQLVESLKNIFVVQAAIGNF 111
           +E   Q +                             +T P+LV +L    +VQ   G  
Sbjct: 210 SESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGAN 269

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYCYLLALA 170
           F+ VLS  G V  F+WG++             P P L+  L  IP+ Q+AAG  + LAL 
Sbjct: 270 FSLVLSERGDV--FAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALT 327

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 229
                  VYS G    G+LG G       P    + + L  Q    +A G  H+ V+ + 
Sbjct: 328 FNGQ---VYSWGNNQFGQLGVGDTAPHTIP---SRLKTLEHQFCAHIACGEDHSVVLTET 381

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFG 288
           G V ++G G  G LGHG  + E  P+++  L    A  V  G   T V   +   +Y+FG
Sbjct: 382 GGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFG 441

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G +  LG     + Q     +VLTP LV  L      +++I+   S    +H FA+   
Sbjct: 442 LGGNGQLGTGVGVEPQ----QHVLTPMLVRVLDATP--ILRIATGASA---SHCFAVV-- 490

Query: 349 GKLYAFGAGDKGQL 362
           G     GA +  QL
Sbjct: 491 GNRNHVGAAESAQL 504



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 109/293 (37%), Gaps = 86/293 (29%)

Query: 125 FSWGN--DARLG-----HHT----EPNDVEPHPL--LGTLENIPVVQIAAGYCYLLALAC 171
           ++WGN  D +LG      HT    EP ++E      + TL +     IA G  + L L  
Sbjct: 86  WAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLAS----AIACGRAHTLFLV- 140

Query: 172 QPSGMAVYSVGCGLGGKLGHGS------RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
                 VYS G    G+LGH        R D   P  I Q          +A G  H+  
Sbjct: 141 ---DGQVYSCGSNDQGQLGHKKHRSKPERVDALEPYTITQ----------IACGETHSLA 187

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECE---------------------------------- 251
           +  +G+V  WG  +   LG    E                                    
Sbjct: 188 LTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFM 247

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           + P++V+AL   K + +  G   + V+SE GDV+++G   S  L    +          V
Sbjct: 248 TRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL--------KTV 299

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             P LV  L  +  R +            HT ALT +G++Y++G    GQLG+
Sbjct: 300 PVPTLVKELYGIPIRQLAAG-------GRHTLALTFNGQVYSWGNNQFGQLGV 345



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 35/156 (22%)

Query: 220 AWHAAVVGQDGRVCTWGWGRY--GCLGH--GNEECESVPKV--VQALNDVKAIHVATG-- 271
           A HA + G       W WG    G LG    N+   +VP+   ++A + V    +A+   
Sbjct: 76  AAHAQLAGS-----VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIA 130

Query: 272 ---DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
               +T F+V  DG VYS G  +   LGH         +H +   P+ V +L+     + 
Sbjct: 131 CGRAHTLFLV--DGQVYSCGSNDQGQLGHK--------KHRS--KPERVDALEPYT--IT 176

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           QI+   +     H+ ALT +G+++A+G     QLG+
Sbjct: 177 QIACGET-----HSLALTSNGQVFAWGDNKASQLGL 207


>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 33/263 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           GIRI   AAG   T+ +SD G V+A+G    G+   G +  ++V++P LV  + + + V+
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSR-IRMVSTPHLVPCIDSSYYVK 277

Query: 106 ---------------------------AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                                       A G   +AV++  G + TF WG   + G    
Sbjct: 278 DRSATLARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGIT 337

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P   + +L  I +  IAAG   L    C  +   VY+ G    G+LG G+   E 
Sbjct: 338 DDELSPT-CVSSLLGIHIEGIAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGADQAET 393

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   L NL    ++ GA H A+V + G+V  WGW +YG LG G+    ++P  V 
Sbjct: 394 LPRLVDSPSLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEV- 452

Query: 259 ALNDVKAIHVATGDYTTFVVSED 281
            +      +VA G + T +++E 
Sbjct: 453 TIEGCVPKNVACGWWHTLLLAES 475



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 153/372 (41%), Gaps = 57/372 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVT---SPQLVESL 98
           I++AAAG    + +++ G+VY +G          FGE+  GV   K V    +P   E +
Sbjct: 103 IVKAAAGWAHCVAVTEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQV 162

Query: 99  KNIFVVQAAIGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 156
                   + G   ++    E  +    S          +  + +   P L TL   I +
Sbjct: 163 SPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRI 222

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI------------ 203
             +AAG  + LAL+   +G+ V++ G G  G+LG GSR      P L+            
Sbjct: 223 ASVAAGGRHTLALS--DTGL-VWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDR 279

Query: 204 -------------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
                        + F++       +A G  H+AV+   G + T+GWG YG  G G  + 
Sbjct: 280 SATLARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDD 339

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           E  P  V +L  +    +A G + T   S DGDVY+FG  +   L       G G   A 
Sbjct: 340 ELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFGQL-------GTGADQAE 392

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            L P+LV S    N     IS         HT  +TE GK++ +G    GQLG+    + 
Sbjct: 393 TL-PRLVDSPSLKNLHAKNISCGAR-----HTALVTEGGKVFCWGWNKYGQLGL---GDV 443

Query: 371 TERGNPERVDID 382
            +R  P  V I+
Sbjct: 444 IDRNIPSEVTIE 455



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 16/141 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI I   AAG   T+  S  G VYAFG + FG  + G    +  T P+LV+
Sbjct: 342 SPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQFG--QLGTGADQAETLPRLVD 399

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLG 149
             SLKN+     + G   TA+++  G+V+ + W    +LG         P++V       
Sbjct: 400 SPSLKNLHAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEV------- 452

Query: 150 TLENIPVVQIAAGYCYLLALA 170
           T+E      +A G+ + L LA
Sbjct: 453 TIEGCVPKNVACGWWHTLLLA 473



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 13/189 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           + G  I + A G   + +I+DAG +  FG   +G+   G+   +L  SP  V SL  I +
Sbjct: 297 IPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDEL--SPTCVSSLLGIHI 354

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---GTLENIPVVQIA 160
              A G + T   S +G VY F      +LG  T  +  E  P L    +L+N+    I+
Sbjct: 355 EGIAAGLWHTVCTSADGDVYAFGGNQFGQLG--TGADQAETLPRLVDSPSLKNLHAKNIS 412

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +    A    G  V+  G    G+LG G   D   P    +  +    P  VA G 
Sbjct: 413 CGARH---TALVTEGGKVFCWGWNKYGQLGLGDVIDRNIP---SEVTIEGCVPKNVACGW 466

Query: 221 WHAAVVGQD 229
           WH  ++ + 
Sbjct: 467 WHTLLLAES 475



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 11/182 (6%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN 247
           LG    T  KH    E F L     +V AA  W H   V + G V TWGW    C+  G 
Sbjct: 78  LGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAVTEHGEVYTWGWKE--CIPSGK 135

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-----IAD 302
              ES   V     DV   H  T  +T  V        S G   S++ G  +     ++ 
Sbjct: 136 VFGESSTGV-SLEKDVPGRH--TPLFTEQVSPRSQGSRSTGGTASSNSGEESTKRRRVSS 192

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
            +    ++  +   +T+   +      I + +      HT AL+++G ++A+G G +GQL
Sbjct: 193 AKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQL 252

Query: 363 GI 364
           G+
Sbjct: 253 GL 254


>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP LV  + +     
Sbjct: 218 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHLVPCINSSSYGK 276

Query: 102 -------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
                              ++   A G   +AV++  G V TF WG   + G  +  +++
Sbjct: 277 DMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDEL 336

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P   + +L  I +  +AAG   L    C      VY+ G    G+LG G    E  PRL
Sbjct: 337 SPS-CVSSLLGIQIEGVAAG---LWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRL 392

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           ++   L N+    ++ GA H A++  +G+V  WGW +YG LG G+    ++P  V  +  
Sbjct: 393 LDCPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEG 451

Query: 263 VKAIHVATGDYTTFVVSE 280
             A +VA G + T +++E
Sbjct: 452 CVAKNVACGWWHTLLLAE 469



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 150/370 (40%), Gaps = 53/370 (14%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVTSPQ---LVE 96
           + I++AAAG    + ++D G+VY +G          FGE+  GV   K V   Q   L E
Sbjct: 100 VTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTE 159

Query: 97  SLKNIFVVQAAIGNFFTAVLSREG--RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
            +        + G   +     E   R    S    A     ++        L+     +
Sbjct: 160 QVSPRSQGSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGV 219

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI---------- 203
            +  +AAG  + LAL+       V+  G G  G+LG GSR      P L+          
Sbjct: 220 RIASVAAGGRHTLALS---DIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGK 276

Query: 204 -----------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
                      + F++       +A G  H+AV+   G V T+GWG YG  G G+ + E 
Sbjct: 277 DMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDEL 336

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            P  V +L  ++   VA G + T   S DGDVY+FG  +   L       G G   A  +
Sbjct: 337 SPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQL-------GTGGDQAETI 389

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P+L+      N  V +IS         HT  + ++GK++ +G    GQLG+    +  +
Sbjct: 390 -PRLLDCPSLENVNVKRISCGAR-----HTALIADNGKVFCWGWNKYGQLGL---GDVID 440

Query: 373 RGNPERVDID 382
           R  P  V I+
Sbjct: 441 RNIPSEVTIE 450



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I   AAG   T+  S  G VYAFG + FG  + G  G +  T P+L++
Sbjct: 337 SPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFG--QLGTGGDQAETIPRLLD 394

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLG 149
             SL+N+ V + + G   TA+++  G+V+ + W    +LG         P++V       
Sbjct: 395 CPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV------- 447

Query: 150 TLENIPVVQIAAGYCYLLALACQPS 174
           T+E      +A G+ + L LA  P+
Sbjct: 448 TIEGCVAKNVACGWWHTLLLAESPT 472



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 27/190 (14%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN 247
           LG    T  KH    E F L     +V AA  W H   V   G V TWGW          
Sbjct: 77  LGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGW---------- 126

Query: 248 EECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
            EC    KV  ++L  V          ++F+  +   V     G  ++ G  +   G+ +
Sbjct: 127 RECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQ---VSPRSQGSKSTGGTASGTSGEES 183

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA------------HTFALTESGKLYAF 354
                ++    T+    +    Q +L   +  N             HT AL++ G+++ +
Sbjct: 184 SKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGW 243

Query: 355 GAGDKGQLGI 364
           G G +GQLG+
Sbjct: 244 GYGGEGQLGL 253


>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 29/258 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP LV  + +     
Sbjct: 205 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHLVPCINSSSYGK 263

Query: 102 -------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
                              ++   A G   +AV++  G V TF WG   + G  +  +++
Sbjct: 264 DMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDEL 323

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P   + +L  I +  +AAG   L    C      VY+ G    G+LG G    E  PRL
Sbjct: 324 SPS-CVSSLLGIQIEGVAAG---LWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRL 379

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           ++   L N+    ++ GA H A++  +G+V  WGW +YG LG G+    ++P  V  +  
Sbjct: 380 LDCPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV-TIEG 438

Query: 263 VKAIHVATGDYTTFVVSE 280
             A +VA G + T +++E
Sbjct: 439 CVAKNVACGWWHTLLLAE 456



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 153/369 (41%), Gaps = 64/369 (17%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVTSPQLVESLK 99
           + I++AAAG    + ++D G+VY +G          FGE+  GV   K V  P+   S  
Sbjct: 100 VTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDV--PRRQSSKS 157

Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLE-NIP 155
                    G       S+  RV      + A+    T  +  +     P L TL   + 
Sbjct: 158 TGGTASGTSGEES----SKRRRV------SSAKQTAETSSSSDDTQTALPCLVTLNPGVR 207

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI----------- 203
           +  +AAG  + LAL+       V+  G G  G+LG GSR      P L+           
Sbjct: 208 IASVAAGGRHTLALS---DIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD 264

Query: 204 ----------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
                     + F++       +A G  H+AV+   G V T+GWG YG  G G+ + E  
Sbjct: 265 MARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELS 324

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           P  V +L  ++   VA G + T   S DGDVY+FG  +   L       G G   A  + 
Sbjct: 325 PSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQL-------GTGGDQAETI- 376

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
           P+L+      N  V +IS         HT  + ++GK++ +G    GQLG+    +  +R
Sbjct: 377 PRLLDCPSLENVNVKRISCGAR-----HTALIADNGKVFCWGWNKYGQLGL---GDVIDR 428

Query: 374 GNPERVDID 382
             P  V I+
Sbjct: 429 NIPSEVTIE 437



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GI+I   AAG   T+  S  G VYAFG + FG  + G  G +  T P+L++
Sbjct: 324 SPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFG--QLGTGGDQAETIPRLLD 381

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL+N+ V + + G   TA+++  G+V+ + W    +LG     +   P  +  T+E  
Sbjct: 382 CPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEV--TIEGC 439

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 440 VAKNVACGWWHTLLLAESPT 459


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 160/348 (45%), Gaps = 40/348 (11%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
            G R++   AG+  ++ I + GQ++ +G +  G   +  + +K  ++P  V++L+N+ +V
Sbjct: 38  HGKRVVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPE-SKTESTPTQVKALENVKIV 96

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIP-------- 155
           QAAIG +    +  +G+ Y  +WG +       EP   E    +L     IP        
Sbjct: 97  QAAIGGWHCLAVDDQGQAY--AWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLR 154

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V Q+AAG  + + L        V++     G     G       P  ++  + + L    
Sbjct: 155 VRQVAAGGTHSVVLT---HNGHVWT----WGQPWPPGDIKQISTPVRVQGLENVQL---- 203

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +A GA+H   + ++G V  WG   YG LG G+ +  S P  VQ L+ +    +A G + +
Sbjct: 204 IAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHS 263

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             ++ D +VY++G GE   LG        G+  ++ + PQ V  L    E + Q+S   +
Sbjct: 264 TALTTDAEVYAWGRGEHGRLGF-------GDDKSSKMVPQKVHLL--AGETIAQVSCGGT 314

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
                H+ A T  G+++++G  D G+LG      +   G+P  V I +
Sbjct: 315 -----HSVARTADGRIFSYGRADHGRLGY---GRKVTTGHPMEVPIGI 354



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 35/289 (12%)

Query: 26  KRNLLGR----EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG---- 77
           +R  LG     +   TP   ++L+ ++I+QAA G    + + D GQ YA+G + +G    
Sbjct: 68  QRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGGNEYGQCGE 127

Query: 78  EAEYGVQGTKL----VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 133
           E E    G+K+    +  PQ       + V Q A G   + VL+  G V+T+        
Sbjct: 128 EPERKEDGSKVLRRDIAIPQ--RCAPQLRVRQVAAGGTHSVVLTHNGHVWTW-------- 177

Query: 134 GHHTEPNDVE----PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
           G    P D++    P  + G LEN+ +  IA G  + LAL  +     V++ G    G+L
Sbjct: 178 GQPWPPGDIKQISTPVRVQG-LENVQL--IAVGAFHNLALLEEGE---VWAWGNNEYGQL 231

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G G       P  ++    L L    +AAG WH+  +  D  V  WG G +G LG G+++
Sbjct: 232 GTGDTQPRSQPVPVQGLSGLIL--ADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDK 289

Query: 250 CES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
               VP+ V  L       V+ G   +   + DG ++S+G  +   LG+
Sbjct: 290 SSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGY 338



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 40/230 (17%)

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S  AV + G G  G+LG G+  D+     I+       + V V AG+ ++  + +DG++ 
Sbjct: 3   SDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLF 62

Query: 234 TWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---- 288
           TWGW + G LGH  E + ES P  V+AL +VK +  A G +    V + G  Y++G    
Sbjct: 63  TWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGGNEY 122

Query: 289 --CGESASLGHNA-------IADGQ-------------GNRHANVLT----------PQL 316
             CGE      +        IA  Q             G  H+ VLT          P  
Sbjct: 123 GQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWTWGQPWP 182

Query: 317 VTSLKQVNERVVQISLTNS--IYWNA-HTFALTESGKLYAFGAGDKGQLG 363
              +KQ++  V    L N   I   A H  AL E G+++A+G  + GQLG
Sbjct: 183 PGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLG 232



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 14/198 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  + L+ +++I  A GA   + + + G+V+A+G + +G+   G   T+  + P  V+
Sbjct: 191 TPVRVQGLENVQLI--AVGAFHNLALLEEGEVWAWGNNEYGQ--LGTGDTQPRSQPVPVQ 246

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L  + +   A G + +  L+ +  VY +  G   RLG   + +       +  L    +
Sbjct: 247 GLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETI 306

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            Q++ G  + +A   + +   ++S G    G+LG+G +    HP  +     + ++P   
Sbjct: 307 AQVSCGGTHSVA---RTADGRIFSYGRADHGRLGYGRKVTTGHPMEVP----IGIRPPKN 359

Query: 217 AA---GAWHAAVVGQDGR 231
           AA   G W   +V   GR
Sbjct: 360 AAENSGCWFVKLVACGGR 377


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 52/365 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVV 104
           +++  + GA  T +I+D G +Y +G    G+  +G    +  + P+LVE  +   ++ VV
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGT--LESYSEPRLVEFFETKPSLRVV 219

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL---------------- 148
             A G   T  L+  G VY+F   +  +LG     +     P L                
Sbjct: 220 SVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSS 279

Query: 149 --------GTLENIPVVQIAAGYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGS 193
                    TL N    Q +     ++ L+C  +  A       +Y+ G G  G+LGHG 
Sbjct: 280 PIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGD 339

Query: 194 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
              +  P+   Q   L+   +V ++ G  H+  + + G V +WG G  G LGHG    + 
Sbjct: 340 SLMQSTPK---QVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQ 396

Query: 253 V-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
           + PK +QA  +     ++ G Y +  +  +G ++++G G+   LG ++  D  G+ ++ V
Sbjct: 397 MTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSPV 456

Query: 312 LTP------QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           L            S     ER + +S         H  A TE+G LY++G G   +LG+ 
Sbjct: 457 LIKSLNNSNGSNNSNSSAGERFINVSSGFQ-----HNVAQTENGDLYSWGCGSGNRLGLA 511

Query: 366 LVNNQ 370
              NQ
Sbjct: 512 NEENQ 516



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 35/189 (18%)

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-- 261
           E+   L  + V ++ GA H +++   G + TWG G  G LGHG  E  S P++V+     
Sbjct: 154 ERIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETK 213

Query: 262 -DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT-- 318
             ++ + VA G   T  ++  G+VYSFG  +S  LG   I+    +      TPQLVT  
Sbjct: 214 PSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYS------TPQLVTFQ 267

Query: 319 ----SLKQVNERVVQISLTNSIYWNAH--------------------TFALTESGKLYAF 354
                    +   + +S + S  +N                      + A+++ G LY +
Sbjct: 268 SPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTW 327

Query: 355 GAGDKGQLG 363
           G GD G+LG
Sbjct: 328 GRGDNGRLG 336



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 20/248 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           RII+ +    R+  IS  G +Y +G+   G   +G   + + ++P+ V SL    +V  +
Sbjct: 304 RIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHG--DSLMQSTPKQVMSLHGHTIVDMS 361

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           +G   +  L++ G V+++  G + +LGH T  +       +   +N  +  I+AG  + +
Sbjct: 362 LGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSI 421

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQP---------- 213
           A+    S   +++ G G  G LG  S  D       P LI+     N             
Sbjct: 422 AIDTNGS---MFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERF 478

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGD 272
           + V++G  H     ++G + +WG G    LG  NEE + +PK +    N+ K    + G+
Sbjct: 479 INVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGE 538

Query: 273 YTTFVVSE 280
             T +V +
Sbjct: 539 IITIIVEK 546



 Score = 48.5 bits (114), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 85/190 (44%), Gaps = 33/190 (17%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           +  TP    SL G  I+  + G G +M ++  G+V+++G+   G+  +G   ++ +T P+
Sbjct: 342 MQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMT-PK 400

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            +++ +N  +   + G + +  +   G ++ +  G+   LG  +  +       LG + N
Sbjct: 401 QIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDS------LGDI-N 453

Query: 154 IPV----------------------VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
            PV                      + +++G+ + +A   Q     +YS GCG G +LG 
Sbjct: 454 SPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVA---QTENGDLYSWGCGSGNRLGL 510

Query: 192 GSRTDEKHPR 201
            +  ++  P+
Sbjct: 511 ANEENQLIPK 520


>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 727

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 105/203 (51%), Gaps = 23/203 (11%)

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-----WHAAV 225
           C   G  V + G G  G+LGHG R DE+ PR +       ++ V V+AG       H+ +
Sbjct: 228 CGAGGSGVAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLL 287

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKV-----VQALNDVKAIHVATGDYTTFVVSE 280
           +   GRV ++G G+YG LGHG    + +P V     V+ L  V+   VA G+  + VV+ 
Sbjct: 288 LTSTGRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTS 347

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DGDVY++G G    LGH   AD +       L P+ VT+    +E V  IS  +      
Sbjct: 348 DGDVYTWGDGFCGQLGH---ADKRPQ-----LAPRQVTAGGLEDEVVASISCGSR----- 394

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           HT A+TE G+++++G G  G LG
Sbjct: 395 HTLAVTEDGEVFSWGLGHFGVLG 417



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 62/401 (15%)

Query: 25  GKRNLLGREVNGTPLYCRSLQG-----IRIIQAAAGAG-----RTMLISDAGQVYAFGKD 74
           G+R  LG          R L+G     +RI+Q +AG G      ++L++  G+V +FG  
Sbjct: 241 GRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLTSTGRVLSFGTG 300

Query: 75  SFGEAEYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
            +G   +G    K    V  PQ VE L ++ V   A G   +AV++ +G VYT+  G   
Sbjct: 301 QYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTSDGDVYTWGDGFCG 360

Query: 132 RLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
           +LGH  +   + P  +  G LE+  V  I+ G  + LA+        V+S G G  G LG
Sbjct: 361 QLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVT---EDGEVFSWGLGHFGVLG 417

Query: 191 HG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG-----------QDGRVCTWGWG 238
              +  D      +  F +    PV  A     A +             +D        G
Sbjct: 418 RSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVAPAVDSFPPRDAAAPALLEG 477

Query: 239 R------------YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           R               L   +   + +PKV+++L  +  +  + G   + ++S++G +YS
Sbjct: 478 RNFAAELMAHLDLIANLSLDDSSDQCIPKVIESLQGIPMVGASAGHRHSLLLSQEGALYS 537

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE------RVVQISLTNSIYWNA 340
            G G    LGH    D Q   H     P  +T+  +  E      R++Q+S    I    
Sbjct: 538 CGAGSGGCLGHG---DTQSQMH-----PVRITAFDEPEEDGSERTRILQMSAGVDI---- 585

Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            + A++  G +Y +G  D G++G+ +  NQ     P RV +
Sbjct: 586 -SMAVSTRGSVYGWGKTDGGRIGLGMARNQVTL--PRRVSV 623



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 14/188 (7%)

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTL-ENIPVVQIAAG-----YCYLLALACQPSG 175
           V  +  G   +LGH    ++  P  L G +   + +VQ++AG       + L L    S 
Sbjct: 235 VAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLT---ST 291

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIE-QF--QLLNLQPVVVAAGAWHAAVVGQDGRV 232
             V S G G  G LGHG    ++ P ++  Q+   L +++   VAAG  H+AVV  DG V
Sbjct: 292 GRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTSDGDV 351

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            TWG G  G LGH ++  +  P+ V A  L D     ++ G   T  V+EDG+V+S+G G
Sbjct: 352 YTWGDGFCGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTEDGEVFSWGLG 411

Query: 291 ESASLGHN 298
               LG +
Sbjct: 412 HFGVLGRS 419



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP------- 144
           P+++ESL+ I +V A+ G+  + +LS+EG +Y+   G+   LGH    + + P       
Sbjct: 505 PKVIESLQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFD 564

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLI 203
            P     E   ++Q++AG    +A++ + S   VY  G   GG++G G +R     PR +
Sbjct: 565 EPEEDGSERTRILQMSAGVDISMAVSTRGS---VYGWGKTDGGRIGLGMARNQVTLPRRV 621

Query: 204 EQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWG 236
             ++  +  PV+   V  G  H+ VVG DG +   G
Sbjct: 622 SVYREEDGSPVLAVDVECGYVHSIVVGLDGTIHMCG 657


>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL------K 99
           G+RI   AAG   T+ +SD GQV+ +G    G+   G +  ++V+SP LV  +      K
Sbjct: 222 GVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHLVPCINSSSYGK 280

Query: 100 NI---------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
           +I                     ++   A G   +AV++  G V TF WG   + G  + 
Sbjct: 281 DISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGST 340

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P+  + +L  I +  +AAG   L    C  +   VY+ G    G+LG G    E 
Sbjct: 341 DDELSPN-CVSSLLGIRIEGVAAG---LWHTVCTSADGDVYAFGGNQFGQLGTGGDQAET 396

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   L N+    ++ GA H A++  +G+V  WGW +YG LG G+    ++P  V 
Sbjct: 397 IPRLLDCPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEV- 455

Query: 259 ALNDVKAIHVATGDYTTFVVSE 280
            +    A +VA G + T +++E
Sbjct: 456 TIEGCVAKNVACGWWHTLLLAE 477



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 153/375 (40%), Gaps = 59/375 (15%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVTSPQ---LVE 96
           + I++AAAG    + ++D G+VY +G          FGE+  GV   K V   Q   L E
Sbjct: 104 VTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTE 163

Query: 97  SLKNIFVVQAAIGNFFTAVLSREG--RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-N 153
            +        + G   +     E   R    S    A     ++       P L TL   
Sbjct: 164 QVSPRSQGSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTA-LPCLVTLNPG 222

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI--------- 203
           + +  +AAG  + LAL+       V+  G G  G+LG GSR      P L+         
Sbjct: 223 VRIASVAAGGRHTLALS---DIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYG 279

Query: 204 ----------------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
                           + F++       +A G  H+AV+   G V T+GWG YG  G G+
Sbjct: 280 KDISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGS 339

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
            + E  P  V +L  ++   VA G + T   S DGDVY+FG  +   L       G G  
Sbjct: 340 TDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQL-------GTGGD 392

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
            A  + P+L+      N  V +IS         HT  +T++GK++ +G    GQLG+   
Sbjct: 393 QAETI-PRLLDCPSLENVNVKRISCGAR-----HTALITDNGKVFCWGWNKYGQLGL--- 443

Query: 368 NNQTERGNPERVDID 382
            +  +R  P  V I+
Sbjct: 444 GDVIDRNIPSEVTIE 458



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 16/145 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    SL GIRI   AAG   T+  S  G VYAFG + FG  + G  G +  T P+L++
Sbjct: 345 SPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFG--QLGTGGDQAETIPRLLD 402

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEPHPLLG 149
             SL+N+ V + + G   TA+++  G+V+ + W    +LG         P++V       
Sbjct: 403 CPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEV------- 455

Query: 150 TLENIPVVQIAAGYCYLLALACQPS 174
           T+E      +A G+ + L LA  P+
Sbjct: 456 TIEGCVAKNVACGWWHTLLLAEPPT 480



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 27/190 (14%)

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGN 247
           LG    T  KH  + E F L     +V AA  W H   V   G V TWGW          
Sbjct: 81  LGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGW---------- 130

Query: 248 EECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
            EC    KV  ++L  V       G  ++F+  +   V     G  ++ G  +   G+ +
Sbjct: 131 RECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQ---VSPRSQGSKSTGGTASGTSGEES 187

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA------------HTFALTESGKLYAF 354
                ++    T+    +    Q +L   +  N             HT AL++ G+++ +
Sbjct: 188 SKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGW 247

Query: 355 GAGDKGQLGI 364
           G G +GQLG+
Sbjct: 248 GYGGEGQLGL 257


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 17/177 (9%)

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LG G+  D   P+ I+ F+ ++++  +VAAGA H A V +DG +  WGWGRYG LG G
Sbjct: 7   GQLGLGTTEDSLVPQKIQAFEGISIK--MVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 64

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
           +     VP+ V +++  K + VA G   T  VS  G +Y++G  +   LGH    D    
Sbjct: 65  DRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFED---- 120

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                L P  + +L+  N  + QIS      W  HT ALT  GKLY +G    GQ+G
Sbjct: 121 ----RLVPHRLEALRGDN--ISQISGG----WR-HTMALTTDGKLYGWGWNKFGQVG 166



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 10/233 (4%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           +G++  G+   G     LV  PQ +++ + I +   A G   TA ++ +G ++ + WG  
Sbjct: 1   WGRNQNGQLGLGTTEDSLV--PQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
             LG     + + P  +  +++   +V +A G+ + ++++   S   +Y+ G    G+LG
Sbjct: 59  GNLGLGDRNDRLVPQKV-SSVDGDKMVMVACGWRHTISVS---SLGGLYTYGWSKYGQLG 114

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           HG   D   P  +E  +  N+  +   +G W H   +  DG++  WGW ++G +G G+  
Sbjct: 115 HGDFEDRLVPHRLEALRGDNISQI---SGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
               P  ++   D K I ++ G   T  V++  +V+S+G G +  LGH    D
Sbjct: 172 DHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVD 224



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   ++ +GI I   AAGA  T  +++ G+++ +G   +G    G
Sbjct: 5   QNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG 64

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
            +  +LV  PQ V S+    +V  A G   T  +S  G +YT+ W    +LGH    + +
Sbjct: 65  DRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRL 122

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            PH L   L    + QI+ G+ + +AL        +Y  G    G++G G   D   P  
Sbjct: 123 VPHRLE-ALRGDNISQISGGWRHTMALTTDGK---LYGWGWNKFGQVGAGDNIDHCSPI- 177

Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
             Q +    Q V+  +  W H   V     V +WG G  G LGHG     + P +++AL+
Sbjct: 178 --QIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 235


>gi|297282340|ref|XP_002808321.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Macaca mulatta]
          Length = 491

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 35/303 (11%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +R + + + A  ++LI+  G+++++G
Sbjct: 83  IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 141

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F      +
Sbjct: 142 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 199

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 200 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 255

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVVAAGAWHAA------VVG 227
           S               E  PR +  F       Q+L +  VVV   A          V+ 
Sbjct: 256 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACXXXXXXXPLVLD 315

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY 285
              RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G ++
Sbjct: 316 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLF 375

Query: 286 SFG 288
            +G
Sbjct: 376 FWG 378



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 20/234 (8%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + PRLI
Sbjct: 105 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 162

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L+ + +V AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 163 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 218

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 219 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 278

Query: 318 TSLKQVNERVVQISLTNSIYWN--------AHTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +             L    +++++G G  G+LG
Sbjct: 279 AIFIEKTKDGQILPVPNVVVRDVACXXXXXXXPLVLDSQKRVFSWGFGGYGRLG 332



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL               A   V+ +   +    + +++ +G ++S+G  E   
Sbjct: 103 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 147

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G ++AF
Sbjct: 148 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 192

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 193 GENKMGQLGL---GNQTD 207



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G RI   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 384 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 443

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  IF  Q A+G   + V++R+
Sbjct: 444 AQEVKTLDGIFSEQVAMGYSHSLVIARD 471


>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
          Length = 484

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 31/260 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--- 102
           G++I++ AAG   T+++SD GQV+ +G    G+   G +  + V+SP  +  +++ F   
Sbjct: 228 GVKIVEVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSR-IRTVSSPHPIPCVQSAFYSK 286

Query: 103 ----------------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
                                 V   A G   +AV++  G + TF WG   + G     +
Sbjct: 287 DRTGIVMGSRTLEGTNDRAATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDD 346

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            + P   +  +  + + ++AAG   L    C  +   VYS G    G+LG GS   E  P
Sbjct: 347 ILSPT-CVSAIMGVKIQRVAAG---LWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVP 402

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           +L+E  +L N     V+ GA H+AV+   G V  WGW +YG LG G+    +VP  V  +
Sbjct: 403 KLVEASKLENKHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQV-PV 461

Query: 261 NDVKAIHVATGDYTTFVVSE 280
                ++V+ G + T V++E
Sbjct: 462 EAYNPLNVSCGWWHTLVLAE 481



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 56/336 (16%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           +AA+G   +    D+ +         G          L   P +V     + +V+ A G 
Sbjct: 179 KAASGPAESRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGG 238

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLAL 169
             T VLS  G+V+ + +G + +LG  +    V  PHP       IP VQ           
Sbjct: 239 RHTLVLSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHP-------IPCVQ----------- 280

Query: 170 ACQPSGMAVYS---VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
                  A YS    G  +G +   G  T+++    ++           +A G  H+AVV
Sbjct: 281 ------SAFYSKDRTGIVMGSRTLEG--TNDRAATCVK----------AIACGGRHSAVV 322

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G + T+GWG YG  G GN +    P  V A+  VK   VA G + T   S DGDVYS
Sbjct: 323 TDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVCTSADGDVYS 382

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   L       G G+  A ++ P+LV + K  N+    +S         H+  +T
Sbjct: 383 FGGNQFGQL-------GTGSDQAEIV-PKLVEASKLENKHARGVSCGAR-----HSAVIT 429

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
           + G ++ +G    GQLG+    + T+R  P +V ++
Sbjct: 430 DKGDVFCWGWNKYGQLGL---GDSTDRNVPCQVPVE 462



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 10/142 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    ++ G++I + AAG   T+  S  G VY+FG + FG+   G    ++V  P+LVE
Sbjct: 349 SPTCVSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIV--PKLVE 406

Query: 97  S--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE 152
           +  L+N      + G   +AV++ +G V+ + W    +  LG  T+ N     P    +E
Sbjct: 407 ASKLENKHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRN----VPCQVPVE 462

Query: 153 NIPVVQIAAGYCYLLALACQPS 174
               + ++ G+ + L LA  P+
Sbjct: 463 AYNPLNVSCGWWHTLVLAEYPT 484


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 59/362 (16%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P   ++L+  +I   + G   +   S ++G VY +G    G    G +   +V  PQ++E
Sbjct: 151 PTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVVQEPQVLE 208

Query: 97  SLK-----NIFVVQAAIGNFFTAVL-----SREGRVYT---FSWGNDARL---------G 134
            LK      + V+Q + G   T  L       EG       F WGN+ +L         G
Sbjct: 209 CLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADG 268

Query: 135 HHTE---------PNDVEPHPLLGTLENI----PVVQIAAGYCYLLALACQPSGMAVYSV 181
           ++ +         P+ ++P P     +N      ++ + A Y Y  AL    S   VY+ 
Sbjct: 269 NNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALT---SNGNVYTW 325

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G G  G+LG+     +  P+++++  L   Q   ++ G +H A + + G+V +WG G  G
Sbjct: 326 GSGEFGRLGYMDIKKQPQPKVLKE--LTGFQVTRISLGYYHGAAITEQGQVFSWGRGING 383

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGHG+   E   + V AL ++  I ++ G+  T  ++  G+VYS+G G+   L      
Sbjct: 384 QLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQL------ 437

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
                 H + L   L   +  + + + QIS         H+ ALT+ GKL+ +G+ + GQ
Sbjct: 438 -----GHGDFLRQSLPIKVANLEDNIAQISAG-----KRHSSALTDDGKLFTWGSNEYGQ 487

Query: 362 LG 363
           LG
Sbjct: 488 LG 489



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 64/319 (20%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPND-------- 141
           P+ V +L+   + Q   G+  T  +++    + FSWG++  A+LGH              
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 142 ---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
              V+   ++  LEN  +  ++ G  +  A + + SG+ VY  G GL G+LG+ +    +
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNE-SGL-VYGWGLGLNGRLGNENEGVVQ 202

Query: 199 HPRLIEQFQL---LNLQPVVVAAGAWHAAVV--------GQDGRVCTWGWGRYGCLGHG- 246
            P+++E  ++   + ++ + ++ G  H   +        G+  +   + WG    L  G 
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262

Query: 247 -------NEECESV----------PKVVQALNDVKA-----IHVATGDYTTFVVSEDGDV 284
                  NE+ +S           P   Q   D K      I V    Y +  ++ +G+V
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           Y++G GE   LG+  I             PQ     +    +V +ISL    Y+  H  A
Sbjct: 323 YTWGSGEFGRLGYMDIKK----------QPQPKVLKELTGFQVTRISLG---YY--HGAA 367

Query: 345 LTESGKLYAFGAGDKGQLG 363
           +TE G+++++G G  GQLG
Sbjct: 368 ITEQGQVFSWGRGINGQLG 386



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 39/192 (20%)

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV------ 253
           P  +   +  N+  V+  +          +  V +WG  +   LGH   +          
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 254 ------PKVVQALNDVKAIHVATGDYTTFVVS-EDGDVYSFGCGESASLGHNAIADGQGN 306
                 P +V+AL + K   ++ G   +F  S E G VY +G G +  LG+         
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGN--------E 196

Query: 307 RHANVLTPQLVTSLK---QVNERVVQISLTNSIYWNAHTFAL----------TESGKLYA 353
               V  PQ++  LK   ++  +V+QIS   +     HT AL          T   KL+ 
Sbjct: 197 NEGVVQEPQVLECLKIAMEIKMKVLQISCGEN-----HTLALIQMPPQNEGETSQNKLFV 251

Query: 354 FGAGDKGQLGIE 365
           +G  DK QLG++
Sbjct: 252 WGNNDKLQLGMD 263


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1
           [Bifidobacterium asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1
           [Bifidobacterium asteroides PRL2011]
          Length = 1160

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 48/345 (13%)

Query: 45  QGIRIIQAAAGA-----GRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVES 97
           QGI+  Q +        G T+ +   G  YA+G++++G+   G   Q  K V   +   +
Sbjct: 660 QGIKFNQISGSRDFGDRGFTLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGA 719

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT------------EPNDVE 143
             +   VQ + G+  +  +  +G  Y ++WGN+   +LG+ +            +PND  
Sbjct: 720 SADFTYVQVSAGDEQSLAVGSDG--YVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPR 777

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
                     +  VQ++AGY + LAL  + +   +++ G    G+LG+G+  +   P L 
Sbjct: 778 --------SGLTAVQVSAGYYHSLALDARGN---IWAWGFNQFGELGNGNNINSAIPTLA 826

Query: 204 EQFQLL-NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           +  +    +  + V+ G  H A +   G   +WGW  +G LG+GN    ++P  VQ   D
Sbjct: 827 QYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRD 886

Query: 263 ---VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
              V+AI V+ G   + ++   G+ +++G  +   LG+     G  +  AN + P +V  
Sbjct: 887 AGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGN-----GSSSADANPV-PGMVKY 940

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +     V  I ++   Y   H+ A+ ++G  +A+G  D G+LGI
Sbjct: 941 PENAGT-VTAIQVSAGGY---HSLAIDKNGNAWAWGGNDSGELGI 981



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 149/338 (44%), Gaps = 36/338 (10%)

Query: 50   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQA 106
            +Q +AG  +++ +   G VYA+G +  G+   G  G       ++++       +  VQ 
Sbjct: 726  VQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQV 785

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-------VVQI 159
            + G + +  L   G ++ + +     LG+    N   P     TL   P        +Q+
Sbjct: 786  SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIP-----TLAQYPRDAGTVTAIQV 840

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-NLQPVVVAA 218
            + G+ +  A+  + +    +S G    G+LG+G+  D   P  ++  +    ++ + V+A
Sbjct: 841  SGGFHHTAAIDTKGN---TWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSA 897

Query: 219  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-----KVVQALNDVKAIHVATGDY 273
            GA H+ ++   G    WGW + G LG+G+   ++ P     K  +    V AI V+ G Y
Sbjct: 898  GADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGY 957

Query: 274  TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
             +  + ++G+ +++G  +S  LG    +  +         P LV   K     V  + ++
Sbjct: 958  HSLAIDKNGNAWAWGGNDSGELGIGTTSKSE--------IPALVQYPKNAGA-VTTVQVS 1008

Query: 334  NSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
               Y   H+  + + GK +A+G    GQLG   ++N +
Sbjct: 1009 AGGY---HSLGIDKEGKTWAWGYNQFGQLGNGTISNSS 1043



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 123/268 (45%), Gaps = 16/268 (5%)

Query: 46   GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVV 104
            G+  +Q +AG   ++ +   G ++A+G + FGE   G    + + T  Q       +  +
Sbjct: 779  GLTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAI 838

Query: 105  QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE--NIPVVQIAAG 162
            Q + G   TA +  +G  +++ W    +LG+    +   P P+    +   +  +Q++AG
Sbjct: 839  QVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAG 898

Query: 163  YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-----RLIEQFQLLNLQPVVVA 217
              + L +  + +    ++ G    G+LG+GS + + +P     +  E    +    + V+
Sbjct: 899  ADHSLIIDTKGN---TWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTA--IQVS 953

Query: 218  AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND---VKAIHVATGDYT 274
            AG +H+  + ++G    WG    G LG G      +P +VQ   +   V  + V+ G Y 
Sbjct: 954  AGGYHSLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYH 1013

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIAD 302
            +  + ++G  +++G  +   LG+  I++
Sbjct: 1014 SLGIDKEGKTWAWGYNQFGQLGNGTISN 1041



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 10/239 (4%)

Query: 40   YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESL 98
            Y R    +  IQ + G   T  I   G  +++G + FG+   G      +  P Q     
Sbjct: 828  YPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDA 887

Query: 99   KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLEN---I 154
              +  +Q + G   + ++  +G  + + W     LG+ +   D  P P ++   EN   +
Sbjct: 888  GTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTV 947

Query: 155  PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQP 213
              +Q++AG  +  +LA   +G A ++ G    G+LG G+ +  + P L++  +    +  
Sbjct: 948  TAIQVSAGGYH--SLAIDKNGNA-WAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTT 1004

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V V+AG +H+  + ++G+   WG+ ++G LG+G     S+P  V A N  + I   T D
Sbjct: 1005 VQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGTISNSSIPTPV-AFNLSQVISSVTFD 1062



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 24   NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            NG  +     V G   Y  +   +  IQ +AG   ++ I   G  +A+G +  G  E G+
Sbjct: 924  NGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSG--ELGI 981

Query: 84   QGTKLVTSPQLVESLKN---IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
              T     P LV+  KN   +  VQ + G + +  + +EG+ + + +    +LG+ T  N
Sbjct: 982  GTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGTISN 1041

Query: 141  DVEPHPLLGTLENI 154
               P P+   L  +
Sbjct: 1042 SSIPTPVAFNLSQV 1055


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 136/323 (42%), Gaps = 41/323 (12%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G    +L++  GQ+Y++G++S G   +GV     V  P+L++      V  A  G F 
Sbjct: 310 SCGTNYAVLVTKQGQLYSWGEESGGRLGHGV--CSYVPHPKLIDEFDGSTVELADCGEFH 367

Query: 113 TAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           T  ++  G +Y  +WG    N   LG  +  +  +P  +LG +E I V  I+ G  +   
Sbjct: 368 TCAVTTSGDLY--AWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWH--- 422

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-- 226
            A   S   +++ G G  G LGHG R     PR +E   L   + +  A G WH+A V  
Sbjct: 423 TAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVE--ALNGCRTIRTACGVWHSAAVVS 480

Query: 227 -----GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
                   G++ TWG G  G LGHG+     +P  V  L+      VA G   T  +S  
Sbjct: 481 VFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMS 540

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G VY+ G  + +             +   V  P  +       E  +  S    +    H
Sbjct: 541 GQVYAMGTADPS-------------QDDVVRAPSCI-------EGGLGKSFVQEVACGYH 580

Query: 342 TFA-LTESGKLYAFGAGDKGQLG 363
             A L    ++Y +G G  GQLG
Sbjct: 581 HIAVLNSKAEVYTWGKGSNGQLG 603



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 34/289 (11%)

Query: 86  TKLVTSPQLVESLKNIFVVQA---AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 140
           + L+T   L + LK+   + A   + G  +  +++++G++Y  SWG ++  RLGH     
Sbjct: 286 SSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQLY--SWGEESGGRLGHGV--C 341

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              PHP L    +   V++A    +          +  +  G    G LG GS      P
Sbjct: 342 SYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKP 401

Query: 201 -RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
            R++ Q + +N++   ++ G WH A V   G++ T+G G +G LGHG+    ++P+ V+A
Sbjct: 402 VRILGQMEGINVR--TISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEA 459

Query: 260 LNDVKAIHVATGDYTTFVV-------SEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           LN  + I  A G + +  V       S  G ++++G G+   LGH  I        A+ L
Sbjct: 460 LNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDI--------ASRL 511

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
            P  VT L   +    Q++   SI     T AL+ SG++YA G  D  Q
Sbjct: 512 IPLSVTELDTTS--FQQVACGQSI-----TVALSMSGQVYAMGTADPSQ 553



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 22/243 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++GI +   + G   T  ++ AG+++ FG  +FG   +G + +  +  P+ VE+L     
Sbjct: 408 MEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNI--PREVEALNGCRT 465

Query: 104 VQAAIGNFFTAVL-------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           ++ A G + +A +       S  G+++T+  G+D +LGH    + + P  +   L+    
Sbjct: 466 IRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVT-ELDTTSF 524

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV 215
            Q+A G    +AL+   SG  VY++G          S+ D  + P  IE   L       
Sbjct: 525 QQVACGQSITVALSM--SGQ-VYAMG------TADPSQDDVVRAPSCIEG-GLGKSFVQE 574

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYT 274
           VA G  H AV+     V TWG G  G LGHG+ E   +P +V+AL   +   V  G +YT
Sbjct: 575 VACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYT 634

Query: 275 TFV 277
             +
Sbjct: 635 ATI 637



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 20/190 (10%)

Query: 180 SVGCGL--GGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           S+G GL  GG    GS     TD   P++++    L+ Q +  + G  +A +V + G++ 
Sbjct: 269 SIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSI--SCGTNYAVLVTKQGQLY 326

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           +WG    G LGHG       PK++   +         G++ T  V+  GD+Y++G G+  
Sbjct: 327 SWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGD-- 384

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
              HNA   G G+  ++    +++  ++ +N R +         W  HT  +T +GKL+ 
Sbjct: 385 ---HNAGLLGLGSGASHWKPVRILGQMEGINVRTISCG-----PW--HTAFVTSAGKLFT 434

Query: 354 FGAGDKGQLG 363
           FG G  G LG
Sbjct: 435 FGDGTFGALG 444



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE- 96
           PL    L      Q A G   T+ +S +GQVYA G     + +       +V +P  +E 
Sbjct: 513 PLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQDD-------VVRAPSCIEG 565

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 135
            L   FV + A G    AVL+ +  VYT+  G++ +LGH
Sbjct: 566 GLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGH 604


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 13/277 (4%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +N  ++ LG   +   L    L+  R IQ +A     + ++  G+VY++G +S+   + G
Sbjct: 63  QNDVKSFLGHAESSLAL-VEGLESERFIQVSA-TSHVLAVTLQGEVYSWGSNSY--KQLG 118

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
             G      P  + +L+   VVQ   G   +A +S+ G +YT+  G   RLGH T  +  
Sbjct: 119 RDGVN--NRPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVN 176

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  +    E I VV +A G     ++     G  +YS G G  GKLGHG+    + P  
Sbjct: 177 VPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGH-IYSFGDGDFGKLGHGTNDRRRQPER 235

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           I      +   V V  G+  +A +   G +  WG GR   LG G E     P+   ALN 
Sbjct: 236 I------DFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNT 289

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            K +  A        V++ G+V+ +G  +   LG +A
Sbjct: 290 HKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGADA 326



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 77/356 (21%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           V+++G     +AE G    + V SPQ+   L  +     A+G   T V+  EGR+++   
Sbjct: 1   VFSWGNTR--DAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWS--- 55

Query: 128 GNDARLGHHTEP-NDVEPH--------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
                 G HT P NDV+           L+  LE+   +Q++A   ++LA+  Q     V
Sbjct: 56  -----CGSHTRPQNDVKSFLGHAESSLALVEGLESERFIQVSA-TSHVLAVTLQGE---V 106

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           YS G     +LG     D  + R ++   L   + V V AG  H+A V + G + TWG G
Sbjct: 107 YSWGSNSYKQLGR----DGVNNRPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRG 162

Query: 239 RYGCLGHGNEECESVPKVVQALND-VKAIHVATG--DYTTFVVSEDGDVYSFGCGESASL 295
            YG LGHG  +  +VP  V A  + ++ +HVA G  D  +  V+EDG +YSFG G+   L
Sbjct: 163 GYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKL 222

Query: 296 GHN--------------------------AIAD-------GQGNRH-------ANVLTPQ 315
           GH                           AI+        G G R+       A +  P+
Sbjct: 223 GHGTNDRRRQPERIDFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPR 282

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
              +L     +VV  +L++      H  A+T+ G+++ +GA D GQLG +  + +T
Sbjct: 283 TAHALN--THKVVDCALSSE-----HGVAVTDRGEVFVWGANDHGQLGADAGSEKT 331


>gi|118373351|ref|XP_001019869.1| HECT domain and RCC1-like domain protein 3 [Tetrahymena
           thermophila]
 gi|89301636|gb|EAR99624.1| HECT domain and RCC1-like domain protein 3 [Tetrahymena thermophila
           SB210]
          Length = 403

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 25/332 (7%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQL 94
           G P   ++ Q  + +      G    IS   ++Y +G+     +  G Q  K  +  PQ 
Sbjct: 49  GIPFKVKTNQKFKSVSTGGFFGAA--ISSKNELYTWGETK--NSRNGHQANKNYILVPQK 104

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           + +L+NI  V  + GN+    L+ + ++Y          G +   +++    L  T++NI
Sbjct: 105 IMNLQNISRV--SCGNWHCLALNNQNQLYVTGHNKYGACGLYG-IDEINGFQLNDTIKNI 161

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            +  I+AG  + L L        VYS G     +  HG++ D+   ++ +  +L  +   
Sbjct: 162 QICSISAGDGFSLYLDI---NQQVYSSGF----RQMHGNKEDQHQYQIKKIKELEGIAIK 214

Query: 215 VVAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            + AG  H+AVV Q+ G V TWG G Y  LGHGN++ +  P  +  L+ ++ +  + G+ 
Sbjct: 215 HINAGFCHSAVVTQERGEVYTWGSGDYYQLGHGNKQSQKKPLKINNLSGIEQVSCSRGEK 274

Query: 274 T--TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
              T   S DG VYS+G G    LGH      +    A+   P+ +  L++       I 
Sbjct: 275 NCHTLATSSDGKVYSWGSGYKGKLGHQNSWSHE--DPADESRPRPIQYLQEKG-----IV 327

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  SI    H+  L++ G+L+ FG    G+LG
Sbjct: 328 IAKSISGGIHSAVLSQDGRLFTFGCCSDGRLG 359



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 29/290 (10%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N RNG +    +     P    +LQ I  +  + G    + +++  Q+Y  G + +G   
Sbjct: 87  NSRNGHQ--ANKNYILVPQKIMNLQNISRV--SCGNWHCLALNNQNQLYVTGHNKYGAC- 141

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
            G+ G   +   QL +++KNI +   + G+ F+  L    +VY+  +        H    
Sbjct: 142 -GLYGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGFRQ-----MHGNKE 195

Query: 141 DVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
           D   + +  +  LE I +  I AG+C+  A+  Q  G  VY+ G G   +LGHG++  +K
Sbjct: 196 DQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGDYYQLGHGNKQSQK 253

Query: 199 HPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEEC------ 250
            P  I    L  ++ V  + G    H      DG+V +WG G  G LGH N         
Sbjct: 254 KPLKINN--LSGIEQVSCSRGEKNCHTLATSSDGKVYSWGSGYKGKLGHQNSWSHEDPAD 311

Query: 251 ESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESASLGH 297
           ES P+ +Q L + K I +A   +G   + V+S+DG +++FGC     LGH
Sbjct: 312 ESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCCSDGRLGH 360



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 27/265 (10%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E+NG  L   +++ I+I   +AG G ++ +    QVY+ G        +G +  +     
Sbjct: 148 EINGFQLN-DTIKNIQICSISAGDGFSLYLDINQQVYSSGFRQM----HGNKEDQHQYQI 202

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSRE-GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           + ++ L+ I +     G   +AV+++E G VYT+  G+  +LGH  + +  +P  +   L
Sbjct: 203 KKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGDYYQLGHGNKQSQKKPLKI-NNL 261

Query: 152 ENIPVVQIAAGY--CYLLALACQPSGMAVYSVGCGLGGKLGHGSR------TDEKHPRLI 203
             I  V  + G   C+ LA +   S   VYS G G  GKLGH +        DE  PR I
Sbjct: 262 SGIEQVSCSRGEKNCHTLATS---SDGKVYSWGSGYKGKLGHQNSWSHEDPADESRPRPI 318

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE------CESVPKVV 257
           +  Q   +      +G  H+AV+ QDGR+ T+G    G LGH  +E       E +P+ +
Sbjct: 319 QYLQEKGIVIAKSISGGIHSAVLSQDGRLFTFGCCSDGRLGHIKDEKRIYLYKEPLPREI 378

Query: 258 QA--LNDVKAIHVATGDYTTFVVSE 280
           Q   LN+ K I   +  Y    ++E
Sbjct: 379 QGPFLNN-KIIDACSSYYFMAAIAE 402



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 19/138 (13%)

Query: 228 QDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           QDG + TWG    GCL + NE+  E +P  V+     K+  V+TG +    +S   ++Y+
Sbjct: 24  QDGFLYTWGLNTAGCLANQNEDQGEGIPFKVKTNQKFKS--VSTGGFFGAAISSKNELYT 81

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +++  GH      Q N++  +L PQ + +L    + + ++S  N   W  H  AL 
Sbjct: 82  WGETKNSRNGH------QANKNY-ILVPQKIMNL----QNISRVSCGN---W--HCLALN 125

Query: 347 ESGKLYAFGAGDKGQLGI 364
              +LY  G    G  G+
Sbjct: 126 NQNQLYVTGHNKYGACGL 143


>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 597

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 118/271 (43%), Gaps = 21/271 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G  II+ + G+     +S  G ++ +G  SFG    G   T  V +P+ + 
Sbjct: 189 TPQLVEELNGEEIIKTSIGSSHACAVSKGGDLFVWGNGSFGV--LGTGDTNNVDTPKCLN 246

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLE 152
           +L  I VV    G     + + +  +Y +    + RLG       V    PHP+ + T E
Sbjct: 247 TLDKIAVVDVVTGEKHACIKTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSE 306

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNL 211
            +  +   A +     LAC  S   V+S G G GG+LGHGS  +D   P   E   L   
Sbjct: 307 KVRFIACGAEH----TLACTSS--TVFSWGSGDGGRLGHGSDCSDRWEP--TEIVALKGS 358

Query: 212 QPVVVAAGAWHAAVV------GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
             + + AG WH+A V         G + TWG G  G LG G     S P +V  L D   
Sbjct: 359 HVLDLGAGTWHSACVIAIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFV 418

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             V  G      ++ DG++Y++G  +  +LG
Sbjct: 419 SAVFCGSSHNAAIASDGNLYTWGSNKHGALG 449



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           P+L+E+   LN + ++  + G+ HA  V + G +  WG G +G LG G+      PK + 
Sbjct: 190 PQLVEE---LNGEEIIKTSIGSSHACAVSKGGDLFVWGNGSFGVLGTGDTNNVDTPKCLN 246

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L+ +  + V TG+    + +   ++Y++G   +  L       G GN    V       
Sbjct: 247 TLDKIAVVDVVTGEKHACIKTSQHELYAWGHCANGRL-------GIGNNDEAVFLSSPHP 299

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                +E+V  I+         HT A T S  ++++G+GD G+LG
Sbjct: 300 IRMPTSEKVRFIACGAE-----HTLACTSS-TVFSWGSGDGGRLG 338



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 19/192 (9%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AVY  G    G+LG G   D +   +I   +  ++  V  + GA  +       +V  WG
Sbjct: 109 AVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTSNGANISFATTHQHQVFVWG 168

Query: 237 WGRYGCLGHGNEECESV----PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
               G LG  +   ++V    P++V+ LN  + I  + G      VS+ GD++ +G G  
Sbjct: 169 GTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVSKGGDLFVWGNGSF 228

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG      G  N   NV TP+ + +L +       I++ + +    H    T   +LY
Sbjct: 229 GVLG-----TGDTN---NVDTPKCLNTLDK-------IAVVDVVTGEKHACIKTSQHELY 273

Query: 353 AFGAGDKGQLGI 364
           A+G    G+LGI
Sbjct: 274 AWGHCANGRLGI 285



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 125/315 (39%), Gaps = 26/315 (8%)

Query: 58  RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 117
           R   + + G VY  GK++ G+   G    +   +       K++  V  + G   +   +
Sbjct: 100 RIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTSNGANISFATT 159

Query: 118 REGRVYTFSWGNDARLGHHTEPND---VEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
            + +V+ +       LG  +        E   L+  L    +++ + G  +  A++    
Sbjct: 160 HQHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVS---K 216

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           G  ++  G G  G LG G   +   P+ +     + +  VV   G  HA +      +  
Sbjct: 217 GGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVT--GEKHACIKTSQHELYA 274

Query: 235 WGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           WG    G LG GN +     S P  ++     K   +A G   T   +    V+S+G G+
Sbjct: 275 WGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLACTSS-TVFSWGSGD 333

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA---LTES 348
              LGH       G+  ++   P  + +LK  +     + L    + +A   A   + +S
Sbjct: 334 GGRLGH-------GSDCSDRWEPTEIVALKGSH----VLDLGAGTWHSACVIAIPLMKDS 382

Query: 349 GKLYAFGAGDKGQLG 363
           G LY +G+G +GQLG
Sbjct: 383 GWLYTWGSGYQGQLG 397


>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 33/261 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------- 95
           G+RI   AAG   T+ +SD GQV+ +G    G+   G + TKLV+SP L+          
Sbjct: 207 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSR-TKLVSSPHLIPCFNPSAYGK 265

Query: 96  -----------ESLKNIFVVQA------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                       S ++I  V        A G   +AV++  G++ TF WG   + G    
Sbjct: 266 DRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNT 325

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            + + P   +  L  + V  IAAG  + L  + +     VY+ G    G+LG G+   E 
Sbjct: 326 HDQLRPA-CVSALSGVKVAGIAAGLWHTLCFSAE---GQVYAFGGNQFGQLGTGADQAET 381

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+L++   L N +  +V+ GA H+ V+ + G + +WGW +YG LG G+    ++P  V 
Sbjct: 382 LPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV- 440

Query: 259 ALNDVKAIHVATGDYTTFVVS 279
           ++   +  +VA G + T +++
Sbjct: 441 SIGGCQLKNVACGWWHTLLLA 461



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 158/387 (40%), Gaps = 85/387 (21%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG--------------------KDSFGEAEYGVQGTKL 88
           I++AAAG    + ++D G+ Y +G                    KDSFG+    +Q  + 
Sbjct: 87  IVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLLDSTGVRFEKDSFGKQSL-LQTEQE 145

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----- 143
              PQ   S           G   + V +R+ R  +      +      E + +      
Sbjct: 146 GPKPQSSNS----------TGGMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETF 195

Query: 144 -PHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGSRTD---- 196
              P L TL   + +  IAAG  + LAL    S M  V+  G G  G+LG GSRT     
Sbjct: 196 LASPCLVTLGPGVRISTIAAGGRHTLAL----SDMGQVWGWGYGGEGQLGLGSRTKLVSS 251

Query: 197 -------------EKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVVGQDGRVCT 234
                        +  P L+ Q  L + + +          +A G  H+AV+   G++ T
Sbjct: 252 PHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLT 311

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +GWG +G  G GN   +  P  V AL+ VK   +A G + T   S +G VY+FG  +   
Sbjct: 312 FGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQ 371

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           L       G G   A  L P+L+ +    N+R   +S         H+  LTE G+++++
Sbjct: 372 L-------GTGADQAETL-PKLLDASNLENKRAKIVSCGAR-----HSVVLTEGGEIFSW 418

Query: 355 GAGDKGQLGIELVNNQTERGNPERVDI 381
           G    GQLG+    +  +R  P  V I
Sbjct: 419 GWNKYGQLGL---GDCIDRNIPSPVSI 442



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L G+++   AAG   T+  S  GQVYAFG + FG  + G    +  T P+L+++
Sbjct: 331 PACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFG--QLGTGADQAETLPKLLDA 388

Query: 98  --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             L+N      + G   + VL+  G ++++ W    +LG     +   P P+  ++    
Sbjct: 389 SNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV--SIGGCQ 446

Query: 156 VVQIAAGYCYLLALA 170
           +  +A G+ + L LA
Sbjct: 447 LKNVACGWWHTLLLA 461


>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
           magnipapillata]
          Length = 441

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 56/366 (15%)

Query: 28  NLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQ 84
           N+L R+    P   + ++G+  IQ   G   T+ +S+ G+VY++G     + G    G  
Sbjct: 56  NVLERK---RPAMIKEVEGVNFIQVTCGGMHTIGVSEHGEVYSWGCNDDGALGRPTEGTD 112

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-----------NDARL 133
           G + +  P+ V   + I VV A+ G+  +A L+ +GRV  F+WG             A +
Sbjct: 113 GEEFI--PRKVLLPQGIRVVYASAGDSHSAALTDDGRV--FAWGAYRDASGQIGLTAASI 168

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH-- 191
           G   E   + P    G   + P V++ +G  + + L  +  G+ +Y+ G G  G+LG   
Sbjct: 169 GKKNEVIKIYPK---GDQIDDPAVKVVSGNDHTVILTSE--GL-IYTSGTGEQGQLGRIK 222

Query: 192 ---GSRTDEKHPRLIEQFQLLNLQPVV----VAAGAWHAAVVGQD-GRVCTWGWGRYGCL 243
              G R   +   +I   Q++  +       + AG++    + +D   V  WG   YG L
Sbjct: 223 ECFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQL 282

Query: 244 GHGNEECESVPKVVQALNDVKA-----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
           G G  E    P+V+Q+L++++      + +  G + + V   +G  YS G  E   L   
Sbjct: 283 GSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYSIGRSEYGRL--- 339

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
               G G        P+ + SL++  E VV+I+   ++     +FA+T+ G LY++G G 
Sbjct: 340 ----GLGKDAKETSLPKKIDSLEK--ENVVKIACGEAV-----SFAVTDKGHLYSWGLGT 388

Query: 359 KGQLGI 364
             QLG+
Sbjct: 389 SLQLGV 394



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 37/316 (11%)

Query: 30  LGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           LGR   GT      P      QGIR++ A+AG   +  ++D G+V+A+G       + G+
Sbjct: 104 LGRPTEGTDGEEFIPRKVLLPQGIRVVYASAGDSHSAALTDDGRVFAWGAYRDASGQIGL 163

Query: 84  QGTKLVTSPQLVESLK-----NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
               +    ++++        +   V+   GN  T +L+ EG +YT   G   +LG   E
Sbjct: 164 TAASIGKKNEVIKIYPKGDQIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKE 223

Query: 139 -----------PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
                         + P  +    +       A  +C     A       VY+ G    G
Sbjct: 224 CFGHRGGRRGLEIILSPQVVRFRKKQFFSDIFAGSFC---TFALSRDTNDVYAWGLNNYG 280

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQP---VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           +LG G+  +  +P +I+    +       + +  G  H+ V   +G+  + G   YG LG
Sbjct: 281 QLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYSIGRSEYGRLG 340

Query: 245 HGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            G +  E S+PK + +L     + +A G+  +F V++ G +YS+G G S  LG   + D 
Sbjct: 341 LGKDAKETSLPKKIDSLEKENVVKIACGEAVSFAVTDKGHLYSWGLGTSLQLG---VGDD 397

Query: 304 QGNRHANVLTPQLVTS 319
           +     ++  P LV S
Sbjct: 398 E-----DIFDPSLVQS 408



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 36/268 (13%)

Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
           ++ + G + T   G+  +LG      + +   ++  +E +  +Q+  G  + + ++    
Sbjct: 33  LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGE 92

Query: 175 GMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR 231
              VYS GC   G LG    G+  +E  PR +   Q   ++ V  +AG  H+A +  DGR
Sbjct: 93  ---VYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQ--GIRVVYASAGDSHSAALTDDGR 147

Query: 232 VCTWGWGR---------YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           V  WG  R            +G  NE  +  PK  Q   D  A+ V +G+  T +++ +G
Sbjct: 148 VFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQI--DDPAVKVVSGNDHTVILTSEG 205

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHAN-----VLTPQLVTSLKQVNERVVQISLTNSIY 337
            +Y+ G GE   LG   I +  G+R        +L+PQ+V        R  +    + I+
Sbjct: 206 LIYTSGTGEQGQLGR--IKECFGHRGGRRGLEIILSPQVV--------RFRKKQFFSDIF 255

Query: 338 WNAH-TFALT-ESGKLYAFGAGDKGQLG 363
             +  TFAL+ ++  +YA+G  + GQLG
Sbjct: 256 AGSFCTFALSRDTNDVYAWGLNNYGQLG 283



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           +V + G + T G G  G LG G    E   P +++ +  V  I V  G   T  VSE G+
Sbjct: 33  LVQKVGHILTLGQGDVGQLGLGENVLERKRPAMIKEVEGVNFIQVTCGGMHTIGVSEHGE 92

Query: 284 VYSFGCGESASLGH-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           VYS+GC +  +LG      DG+      VL PQ +        RVV  S  +S     H+
Sbjct: 93  VYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGI--------RVVYASAGDS-----HS 139

Query: 343 FALTESGKLYAFGA--GDKGQLGI 364
            ALT+ G+++A+GA     GQ+G+
Sbjct: 140 AALTDDGRVFAWGAYRDASGQIGL 163



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 16/212 (7%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLIS-DAGQVYAFGKDSFGEAEY 81
           R G+R L   E+  +P   R  +        AG+  T  +S D   VYA+G +++G+   
Sbjct: 228 RGGRRGL---EIILSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQLGS 284

Query: 82  GVQGTKLVTSPQLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
           G   T+   +P++++SL  I       +Q   G   + V    G+ Y+       RLG  
Sbjct: 285 GT--TENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGKTYSIGRSEYGRLGLG 342

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
            +  +      + +LE   VV+IA G     A+  +     +YS G G   +LG G   D
Sbjct: 343 KDAKETSLPKKIDSLEKENVVKIACGEAVSFAVTDKGH---LYSWGLGTSLQLGVGDDED 399

Query: 197 EKHPRLIEQFQLLNLQPVV--VAAGAWHAAVV 226
              P L++   L   Q  V  V+AG  H A++
Sbjct: 400 IFDPSLVQSNNLTLAQDEVLAVSAGGQHTAIL 431


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 138/303 (45%), Gaps = 36/303 (11%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLV 89
           E+   P    +L+G++I+  + G   T  +   G++Y++G       G    G  G K  
Sbjct: 122 EMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDE 181

Query: 90  TSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            +P+L+ +L  + + ++    G F T  LS++G ++ +  G   RLG+        P P+
Sbjct: 182 PTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPI 241

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG------CGLGGKLGHGSRTDEKHPR 201
                   VV IAAG  +  AL        +YS G       G+GG L       E  P 
Sbjct: 242 -EFFSKDNVVSIAAGRDFSFALT---DNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPV 297

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           L+E F  L+++ +  AAG  HAA V  DGR+  WG            +    P  + A+N
Sbjct: 298 LVEAFNGLSVKQI--AAGYDHAAAVTDDGRLYMWG-----------SKIWIEPHEMTAVN 344

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           + K + VA G   T  +SE+G+V++FG G S  LGH       G+R  N L P  + +L 
Sbjct: 345 EYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGH-------GDRK-NQLQPVQIEALA 396

Query: 322 QVN 324
            VN
Sbjct: 397 DVN 399



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 149/327 (45%), Gaps = 30/327 (9%)

Query: 46  GIRIIQAAAGAGRTML---ISDAGQVYAFGKDSFGE------AEYGVQGTKLVTSPQLVE 96
           G R   A + A R+ L    S    VY +G  + G+       + G++      +P+L+E
Sbjct: 19  GCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLE 78

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
           + +   +     G   +A +  +G++Y +     ++LG   E +++E  P  +  L+ + 
Sbjct: 79  AFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGL-GESSEMETLPREVEALKGVK 137

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCG-----LGGKLGHGSRTDEKHPRLIEQFQLLN 210
           +V ++ G  +  A+        +YS G G       G LGH    DE  PRL+       
Sbjct: 138 IVDVSCGDYFTAAVDADGK---MYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQG 194

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           +  + V  G +H   + +DG +  WG G YG LG+G  +   VP+ ++  +    + +A 
Sbjct: 195 VPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAA 254

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQ 329
           G   +F ++++G++YS+G      LG   I  G      N+ + P LV +   ++  V Q
Sbjct: 255 GRDFSFALTDNGELYSWGGNSQNQLG---IGGGLAMDVYNIESIPVLVEAFNGLS--VKQ 309

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGA 356
           I+         H  A+T+ G+LY +G+
Sbjct: 310 IAAGYD-----HAAAVTDDGRLYMWGS 331



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 61/244 (25%)

Query: 177 AVYSVGCGLGGKLGHG--------SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +VY+ G G  G+LGHG        +  +E  P+L+E F+   +  V    GA H+A + +
Sbjct: 43  SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEF--GASHSAAIDE 100

Query: 229 DGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           DG++  WG   Y  LG G + E E++P+ V+AL  VK + V+ GDY T  V  DG +YS+
Sbjct: 101 DGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSW 160

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLK-------------------------- 321
           G G S                 +  TP+L+T+L                           
Sbjct: 161 GWGGST---MKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIW 217

Query: 322 ------------------QVNERVVQISLTNSIYWNA---HTFALTESGKLYAFGAGDKG 360
                             +V E +   S  N +   A    +FALT++G+LY++G   + 
Sbjct: 218 AWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQN 277

Query: 361 QLGI 364
           QLGI
Sbjct: 278 QLGI 281


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 24/284 (8%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V     G    AVL+  G VYT+  G   RLGH    +   P  + G L  +   Q+A G
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLG------HGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + Y  A++ Q    A+Y+ G G  G+LG      HG+  D   PR ++ F    ++ + V
Sbjct: 62  FAYTAAVSAQ---GALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISV 118

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC----------ESVPKVVQALNDVKAI 266
             G +H   +     V TWG  R G LG+ N +              P+ V +++ ++  
Sbjct: 119 GPGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVR 178

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            V  G   T +++ +G  Y  G      LG         N   +   P      +   +R
Sbjct: 179 RVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKR 238

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           V QI+         H+ ALTE G++++ GAG+KGQLG   V+N+
Sbjct: 239 VAQIACGGE-----HSVALTEDGEVHSCGAGNKGQLGHGNVDNE 277



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 49/318 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAA 107
           +     G     +++ AG+VY +G+  FG   +G      + +P+LV  +L  +   Q A
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHG--DAHSLKAPRLVRGALVGVVCAQVA 59

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPL--LGTLENIPVVQI 159
            G  +TA +S +G +YT+  G + RLG      H    + + P PL   G    +  + +
Sbjct: 60  CGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGG-RAVREISV 118

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-----RTDE-----KHPRLIEQFQLL 209
             G  + +AL    S   VY+ G    G+LG+ +     R  E       PR ++    L
Sbjct: 119 GPGGYHTVALV---SPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGL 175

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP------------KVV 257
            ++ VV  AG  H A++  +G     G    G LG G+ E  S P            +++
Sbjct: 176 RVRRVV--AGWGHTALLTAEGAAYVCGRNFQGQLGLGDPE--SFPHNERGHPYQPDFRLL 231

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             L   +   +A G   +  ++EDG+V+S G G    LGH  + + Q         P++V
Sbjct: 232 DRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQ--------FPRVV 283

Query: 318 TSLKQVNERVVQISLTNS 335
           + LK     V++++  N+
Sbjct: 284 SRLKASRRDVLEVACGNN 301



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 34/264 (12%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKL-VTSPQLVESL 98
           +L G+   Q A G   T  +S  G +Y +G       G  +Y   G    V +P+ +++ 
Sbjct: 49  ALVGVVCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAF 108

Query: 99  KNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG------- 149
               V + ++G   + T  L     VYT+      +LG+    NDV P    G       
Sbjct: 109 GGRAVREISVGPGGYHTVALVSPADVYTWGHNRVGQLGYTN--NDVVPRNGEGAHFVPRP 166

Query: 150 ----TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-----RTDEKHP 200
               ++  + V ++ AG+ +   L  +    A Y  G    G+LG G        +  HP
Sbjct: 167 RRVDSVSGLRVRRVVAGWGHTALLTAE---GAAYVCGRNFQGQLGLGDPESFPHNERGHP 223

Query: 201 RLIEQFQLLNL----QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
                F+LL+     +   +A G  H+  + +DG V + G G  G LGHGN + E  P+V
Sbjct: 224 -YQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRV 282

Query: 257 VQALNDVK--AIHVATGDYTTFVV 278
           V  L   +   + VA G+  T V+
Sbjct: 283 VSRLKASRRDVLEVACGNNGTLVL 306



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 27  RNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG---- 82
           RN  G      P    S+ G+R+ +  AG G T L++  G  Y  G++  G+   G    
Sbjct: 155 RNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPES 214

Query: 83  ----VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                +G       +L++ L    V Q A G   +  L+ +G V++   GN  +LGH   
Sbjct: 215 FPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNV 274

Query: 139 PNDVEP 144
            N+  P
Sbjct: 275 DNEQFP 280


>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
          Length = 479

 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 31/260 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--- 102
           G++I++ AAG   T+++SD GQV+ +G    G+   G +  + V+SP  +  +++ F   
Sbjct: 223 GVKIVEVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSR-IRTVSSPHPIPCVQSAFYSK 281

Query: 103 ----------------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
                                 V   A G   +AV++  G + TF WG   + G     +
Sbjct: 282 DRTGIVMGSRTLEGTNDRAATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDD 341

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            + P   +  +  + + ++AAG   L    C  +   VYS G    G+LG GS   E  P
Sbjct: 342 ILSPT-CVSAIMGVKIQRVAAG---LWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVP 397

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           +L+E  +L N     V+ GA H+AV+   G V  WGW +YG LG G+    +VP  V  +
Sbjct: 398 KLVEASKLENNHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQV-PV 456

Query: 261 NDVKAIHVATGDYTTFVVSE 280
                ++V+ G + T V++E
Sbjct: 457 EAYNPLNVSCGWWHTLVLAE 476



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 140/336 (41%), Gaps = 56/336 (16%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           +AA+G   +    D+ +         G          L   P +V     + +V+ A G 
Sbjct: 174 KAASGPAESRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGG 233

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLAL 169
             T VLS  G+V+ + +G + +LG  +    V  PHP       IP VQ           
Sbjct: 234 RHTLVLSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHP-------IPCVQ----------- 275

Query: 170 ACQPSGMAVYS---VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
                  A YS    G  +G +   G  T+++    ++           +A G  H+AVV
Sbjct: 276 ------SAFYSKDRTGIVMGSRTLEG--TNDRAATCVK----------AIACGGRHSAVV 317

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
              G + T+GWG YG  G GN +    P  V A+  VK   VA G + T   S DGDVYS
Sbjct: 318 TDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVCTSADGDVYS 377

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG  +   L       G G+  A ++ P+LV + K  N     +S         H+  +T
Sbjct: 378 FGGNQFGQL-------GTGSDQAEIV-PKLVEASKLENNHARGVSCGAR-----HSAVIT 424

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
           + G ++ +G    GQLG+    + T+R  P +V ++
Sbjct: 425 DKGDVFCWGWNKYGQLGL---GDSTDRNVPCQVPVE 457



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 10/142 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    ++ G++I + AAG   T+  S  G VY+FG + FG+   G    ++V  P+LVE
Sbjct: 344 SPTCVSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIV--PKLVE 401

Query: 97  S--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLE 152
           +  L+N      + G   +AV++ +G V+ + W    +  LG  T+ N     P    +E
Sbjct: 402 ASKLENNHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRN----VPCQVPVE 457

Query: 153 NIPVVQIAAGYCYLLALACQPS 174
               + ++ G+ + L LA  P+
Sbjct: 458 AYNPLNVSCGWWHTLVLAEYPT 479


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 166/374 (44%), Gaps = 73/374 (19%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV-- 95
           PL   SL  +++   AAG   ++ +++ G+V +FG +  G+   G   TK+  S  L   
Sbjct: 591 PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQC--GQPITKIAESSDLAAV 648

Query: 96  ---------ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT--------- 137
                    + L+   VV  A G + +A+++ +G +YTF  G + +LGH T         
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708

Query: 138 ---------EPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
                    + +  +P P  L  L    V Q+A G  +    AC     A+Y+ G G  G
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHS---ACVTEEGALYTWGRGANG 765

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LGHG  TD+  P+ +E   + +   V VA G  H+A V   G + T G    G LG G+
Sbjct: 766 QLGHGDMTDQATPKRVEA-GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGD 824

Query: 248 E---------------EC-ESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           E                C E +P  +  L+   V+ + +A G      ++  G +Y++G 
Sbjct: 825 EWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGK 884

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G +  LG +           +V  P  ++S+    + VV ++  +      H  ALT+ G
Sbjct: 885 GTALGLGPSG----------DVSEPTHLSSI----DGVVSVACGD-----IHAAALTDKG 925

Query: 350 KLYAFGAGDKGQLG 363
           +LY +G+ + G+LG
Sbjct: 926 QLYMWGSSEAGRLG 939



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
           L+ +  L N     +A   ++  +  Q G + +WG    G LGH     +  P  +++L+
Sbjct: 541 LLSEASLKNKSEEFIAE--YYKNIKEQTGLILSWGANSDGVLGHTGGIEQLWPLAIESLS 598

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
            V+   VA G++ +  ++E+G+V SFG  +    G       + +  A V  P+ +    
Sbjct: 599 SVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPD 658

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
            + ++ V +S+    Y   H+  +T  G+LY FG G + QLG + V    E GN
Sbjct: 659 DLRKKTV-VSIAAGGY---HSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 113/308 (36%), Gaps = 95/308 (30%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--------------------V 83
           L+   ++  AAG   + L++  G++Y FG+   GE + G                     
Sbjct: 660 LRKKTVVSIAAGGYHSALVTADGELYTFGRG--GEFQLGHDTVMALGEGGNALHYRSNSA 717

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
           Q +     P  + +L    V Q A G F +A ++ EG +YT+  G + +LGH    +   
Sbjct: 718 QTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQAT 777

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLAL---------------------------------- 169
           P  +   +++  +V++A G  +  A+                                  
Sbjct: 778 PKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTG 837

Query: 170 ---ACQ---PSGMAVYSV--------GCGLG--------------GK---LGHGSRTDEK 198
              +CQ   P+ +++ SV         CG G              GK   LG G   D  
Sbjct: 838 SGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGPSGDVS 897

Query: 199 HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPK 255
            P       L ++  VV VA G  HAA +   G++  WG    G LG G   E     PK
Sbjct: 898 EPT-----HLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPK 952

Query: 256 VVQALNDV 263
           +V A  D+
Sbjct: 953 LVPAFADI 960


>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 33/261 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------- 95
           G+RI   AAG   T+ +SD GQV+ +G    G+   G + TKLV+SP L+          
Sbjct: 243 GVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSR-TKLVSSPHLIPCFNPSAYGK 301

Query: 96  -----------ESLKNIFVVQA------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                       S ++I  V        A G   +AV++  G++ TF WG   + G    
Sbjct: 302 DRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNT 361

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            + + P   +  L  + V  IAAG  + L  + +     VY+ G    G+LG G+   E 
Sbjct: 362 HDQLRPA-CVSALSGVKVAGIAAGLWHTLCFSAEGQ---VYAFGGNQFGQLGTGADQAET 417

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            P+L++   L N +  +V+ GA H+ V+ + G + +WGW +YG LG G+    ++P  V 
Sbjct: 418 LPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV- 476

Query: 259 ALNDVKAIHVATGDYTTFVVS 279
           ++   +  +VA G + T +++
Sbjct: 477 SIGGCQLKNVACGWWHTLLLA 497



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 158/387 (40%), Gaps = 85/387 (21%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG--------------------KDSFGEAEYGVQGTKL 88
           I++AAAG    + ++D G+ Y +G                    KDSFG+    +Q  + 
Sbjct: 123 IVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLLDSTGVRFEKDSFGKQSL-LQTEQE 181

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----- 143
              PQ   S           G   + V +R+ R  +      +      E + +      
Sbjct: 182 GPKPQSSNS----------TGGMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETF 231

Query: 144 -PHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMA-VYSVGCGLGGKLGHGSRTD---- 196
              P L TL   + +  IAAG  + LAL    S M  V+  G G  G+LG GSRT     
Sbjct: 232 LASPCLVTLGPGVRISTIAAGGRHTLAL----SDMGQVWGWGYGGEGQLGLGSRTKLVSS 287

Query: 197 -------------EKHPRLIEQFQLLNLQPVV---------VAAGAWHAAVVGQDGRVCT 234
                        +  P L+ Q  L + + +          +A G  H+AV+   G++ T
Sbjct: 288 PHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLT 347

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +GWG +G  G GN   +  P  V AL+ VK   +A G + T   S +G VY+FG  +   
Sbjct: 348 FGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQ 407

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           L       G G   A  L P+L+ +    N+R   +S         H+  LTE G+++++
Sbjct: 408 L-------GTGADQAETL-PKLLDASNLENKRAKIVSCGAR-----HSVVLTEGGEIFSW 454

Query: 355 GAGDKGQLGIELVNNQTERGNPERVDI 381
           G    GQLG+    +  +R  P  V I
Sbjct: 455 GWNKYGQLGL---GDCIDRNIPSPVSI 478



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L G+++   AAG   T+  S  GQVYAFG + FG  + G    +  T P+L+++
Sbjct: 367 PACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFG--QLGTGADQAETLPKLLDA 424

Query: 98  --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             L+N      + G   + VL+  G ++++ W    +LG     +   P P+  ++    
Sbjct: 425 SNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPV--SIGGCQ 482

Query: 156 VVQIAAGYCYLLALA 170
           +  +A G+ + L LA
Sbjct: 483 LKNVACGWWHTLLLA 497


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 30  LGREVN--GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG EV+  G P     L G+R ++ A G   T+ ++D G+V+A+G +  G      +GT 
Sbjct: 135 LGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVGVSDRGT- 193

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              +PQ +ESL+   ++  + G   +A LS E  VYT+   N  +LG       +     
Sbjct: 194 --CAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTR 251

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + TL N+P+VQIA G  ++LAL+   +   VY+ G GL G+  +  + D   P +I+  +
Sbjct: 252 IRTLRNVPIVQIACGQYHMLALS---AAGEVYAWGQGLQGQTANEKKVDTNIPHVIDALK 308

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
              ++  ++AAG  H+AVV   GR+ T G
Sbjct: 309 ESRVK--MIAAGGSHSAVVDDKGRLFTVG 335



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 30/308 (9%)

Query: 63  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
            + G +Y +G   FG+   G Q  + +  PQ+ + + N      A G   TA +++ G +
Sbjct: 11  KEGGYLYTWGSGQFGQLGIGTQNDESL--PQIAKEIDNEICTFTAAGANTTAAITQGGVL 68

Query: 123 YTFSWGNDARLGHHTE---PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           +TF  G+  +LGH       N V P  +    + + VV  +    ++ A+    S   V+
Sbjct: 69  WTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGS---VW 125

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           + G G  G+LGH     E H   I +    L  ++ V VA G  H   +  DGRV  WG 
Sbjct: 126 TWGRGTFGRLGH-----EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGN 180

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            + GC+G  ++     P+ +++L   K I ++ G  ++  +S + +VY++G      LG 
Sbjct: 181 NKTGCVGV-SDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGL 239

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                GQG R+  +  P  + +L+ V   +VQI+         H  AL+ +G++YA+G G
Sbjct: 240 -----GQGARY--ISQPTRIRTLRNVP--IVQIACGQY-----HMLALSAAGEVYAWGQG 285

Query: 358 DKGQLGIE 365
            +GQ   E
Sbjct: 286 LQGQTANE 293



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 30/316 (9%)

Query: 66  GQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           G ++ FG+    +  +G  G  +  V   ++ ++   + VV  +I +   A ++ +G V+
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           T+  G   RLGH      + P  + G L+ +  V++A G+ + LAL        V++ G 
Sbjct: 126 TWGRGTFGRLGHEVHETGI-PEKVPG-LDGMRFVKVACGHVHTLALT---DDGRVFAWGN 180

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
              G +G   R     P+ IE   L   + + ++AG   +A +  +  V TWG   YG L
Sbjct: 181 NKTGCVGVSDR-GTCAPQEIE--SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQL 237

Query: 244 GHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           G G      S P  ++ L +V  + +A G Y    +S  G+VY++G G      +    D
Sbjct: 238 GLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVD 297

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                  N+  P ++ +LK+   RV  I+   S     H+  + + G+L+  G  +    
Sbjct: 298 ------TNI--PHVIDALKE--SRVKMIAAGGS-----HSAVVDDKGRLFTVGEEED--- 339

Query: 363 GIELVNNQTERGNPER 378
             E+V  +TER   ER
Sbjct: 340 -WEVVRVRTERTAGER 354



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +  G+ ++  +   G    +++ G V+ +G+ +FG   + V  T +   P+ V  L  + 
Sbjct: 99  AFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI---PEKVPGLDGMR 155

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            V+ A G+  T  L+ +GRV  F+WGN+                 + +L    ++ I+AG
Sbjct: 156 FVKVACGHVHTLALTDDGRV--FAWGNNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAG 213

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
                AL+ +     VY+ G    G+LG   G+R   +  R+     L N+  V +A G 
Sbjct: 214 MESSAALSAEHE---VYTWGADNYGQLGLGQGARYISQPTRI---RTLRNVPIVQIACGQ 267

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +H   +   G V  WG G  G   +  +   ++P V+ AL + +   +A G   + VV +
Sbjct: 268 YHMLALSAAGEVYAWGQGLQGQTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDD 327

Query: 281 DGDVYSFG 288
            G +++ G
Sbjct: 328 KGRLFTVG 335



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 15/150 (10%)

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G + TWG G++G LG G +  ES+P++ + +++      A G  TT  +++ G +++FG 
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
           G+S  LGH    D      +N + P      ++V +    +S+ N    + H  A+TE G
Sbjct: 74  GDSNQLGHGDTGD-----CSNQVLP------REVEDAFDGLSVVNCSICDGHMAAVTEDG 122

Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            ++ +G G  G+LG E+     E G PE+V
Sbjct: 123 SVWTWGRGTFGRLGHEV----HETGIPEKV 148



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
           A +  G  +Y+ G G  G+LG G++ DE  P++ ++    N      AAGA   A + Q 
Sbjct: 8   AQEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEID--NEICTFTAAGANTTAAITQG 65

Query: 230 GRVCTWGWGRYGCLGHGNE-ECES--VPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVY 285
           G + T+G G    LGHG+  +C +  +P+ V+ A + +  ++ +  D     V+EDG V+
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G G    LGH     G          P+ V  L  +  R V+++       + HT AL
Sbjct: 126 TWGRGTFGRLGHEVHETG---------IPEKVPGLDGM--RFVKVACG-----HVHTLAL 169

Query: 346 TESGKLYAFGAGDKGQLGI 364
           T+ G+++A+G    G +G+
Sbjct: 170 TDDGRVFAWGNNKTGCVGV 188


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 150/354 (42%), Gaps = 42/354 (11%)

Query: 28  NLLGRE--VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           ++LG E      P    S + + +   A G     +I+  G+V+++GK+S G   + V  
Sbjct: 466 SMLGSEDLPKALPRLVGSTKMLDVQSIACGENHAAIITKQGEVFSWGKESSGRLGHKVNV 525

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPND 141
           +  ++ P++V++L ++ V   A G+  T  ++  G +  F WG  A     L      N 
Sbjct: 526 S--LSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGEL--FEWGEGANSLGLLNDWYGRNQ 581

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             PH L G ++NI V +IA G  ++  +    S   +++ G G  G LGHG       P+
Sbjct: 582 WVPHKLFGPMDNISVSKIACGEWHMAIIT---SSGQLFTYGDGTFGVLGHGDTQGIARPK 638

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVV----------GQDGRVCTWGWGRYGCLGHGNEECE 251
            +E  + L +  V  A G WH A +             G++ TWG    G L H +++ +
Sbjct: 639 EVESLKGLRMSSV--ACGPWHTAAIVEVMSSFKANAPSGKLFTWGNADRGKLDHADKKMK 696

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
            VP  V +L     I V+ G                            +     +RH  +
Sbjct: 697 LVPTCVDSLIVYDFIQVSCG----------------MALTVVLTVTGVVFTVGSSRHGQL 740

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYW-NAHTFALTESGKLYAFGAGDKGQLGI 364
             PQ+        E +++      I   ++H   LT +GK++ +G G +GQLG+
Sbjct: 741 GNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGL 794



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 20/246 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           +  I + + A G     +I+ +GQ++ +G  +FG   +G   T+ +  P+ VESLK + +
Sbjct: 591 MDNISVSKIACGEWHMAIITSSGQLFTYGDGTFGVLGHG--DTQGIARPKEVESLKGLRM 648

Query: 104 VQAAIGNFFTAVLSREGRVYT--------FSWGNDAR--LGHHTEPNDVEPHPLLGTLEN 153
              A G + TA +      +         F+WGN  R  L H  +   + P   + +L  
Sbjct: 649 SSVACGPWHTAAIVEVMSSFKANAPSGKLFTWGNADRGKLDHADKKMKLVP-TCVDSLIV 707

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              +Q++ G    + L        V S      G+LG+  + D ++   +E   LL  + 
Sbjct: 708 YDFIQVSCGMALTVVLTVTGVVFTVGS---SRHGQLGN-PQVDGEYICTVEG--LLKTEF 761

Query: 214 VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
           V  +++G+ H AV+  +G+V TWG G  G LG G+    S P +V+AL       +A G 
Sbjct: 762 VREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEALEGRHVESIACGS 821

Query: 273 YTTFVV 278
             T  +
Sbjct: 822 SFTAAI 827



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 137/317 (43%), Gaps = 50/317 (15%)

Query: 30  LGREVN---GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK---------DSFG 77
           LG +VN     P   ++L  + +   A G+  T  ++ +G+++ +G+         D +G
Sbjct: 519 LGHKVNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGELFEWGEGANSLGLLNDWYG 578

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH- 136
             ++           +L   + NI V + A G +  A+++  G+++T+  G    LGH  
Sbjct: 579 RNQW--------VPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYGDGTFGVLGHGD 630

Query: 137 ----TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL--------ACQPSGMAVYSVGCG 184
                 P +VE      +L+ + +  +A G  +  A+        A  PSG  +++ G  
Sbjct: 631 TQGIARPKEVE------SLKGLRMSSVACGPWHTAAIVEVMSSFKANAPSG-KLFTWGNA 683

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
             GKL H  +  +  P  ++   + +   + V+ G     V+   G V T G  R+G LG
Sbjct: 684 DRGKLDHADKKMKLVPTCVDSLIVYDF--IQVSCGMALTVVLTVTGVVFTVGSSRHGQLG 741

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           +   + E +  V   L       +++G     V++ +G V+++G G    LG   + D  
Sbjct: 742 NPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLG---LGD-- 796

Query: 305 GNRHANVLTPQLVTSLK 321
              + N  +P LV +L+
Sbjct: 797 ---YVNRSSPTLVEALE 810


>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 441

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 29/262 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISD--------AGQVYAFGKDSFGEAEYGVQGT-KL 88
           P   +   GIRI   AAG   T+ +SD         GQV+ +G    GE + G+    ++
Sbjct: 180 PCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYG--GEGQLGLGSCIRI 237

Query: 89  VTSPQLVES--------------LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           V+ PQ +                +   ++   A G   +AV++  G V TF WG   ++G
Sbjct: 238 VSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTFGWGLYGQIG 297

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
             +  +++ P   + TL+ + +V IAAG  + L   C  +   VYS G    G+LG G  
Sbjct: 298 QGSTEDELSPS-HVSTLQGLSIVGIAAGLWHTL---CITNTGDVYSFGGNQFGQLGVGGN 353

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             E  PRLI+   L +   V VA GA H+ V+   G++  WGW +YG LG G+     +P
Sbjct: 354 NAELSPRLIDAPLLGDELSVAVACGARHSVVLTGSGKIFAWGWNKYGQLGLGDCNNRDLP 413

Query: 255 KVVQALNDVKAIHVATGDYTTF 276
             V   +  +A  +A G + T 
Sbjct: 414 MQVTMNDGGRAASIACGWWHTL 435



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 156/371 (42%), Gaps = 69/371 (18%)

Query: 55  GAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 114
           G G  + IS++G +  +G  +     Y + G K    P+L     +  +V AA G    A
Sbjct: 54  GCGFGIAISESGNLNTWGSTTDHGHCYLISG-KQQEVPELYPLPTDSPIVHAAGGWAHCA 112

Query: 115 VLSREGRVYTFSW--------------------GNDA-----------------RLGHHT 137
            ++ +G VYT+ W                    G+D                  +    +
Sbjct: 113 AVTGDGEVYTWGWSECTKPTGKQTLRNLACKTTGSDGAEEVIKRRKVITNSAEGQSPEAS 172

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA-----VYSVGCGLGGKLGHG 192
           E N   P  L+     I +  +AAG  + LAL+   + M      V+  G G  G+LG G
Sbjct: 173 EENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGGEGQLGLG 232

Query: 193 SRTD-EKHPRLIEQFQLLNLQ------PV------VVAAGAWHAAVVGQDGRVCTWGWGR 239
           S       P+ I  F + +        P+       +A G  H+AV+   G V T+GWG 
Sbjct: 233 SCIRIVSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTFGWGL 292

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
           YG +G G+ E E  P  V  L  +  + +A G + T  ++  GDVYSFG  +   L    
Sbjct: 293 YGQIGQGSTEDELSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFGQL---- 348

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
              G G  +A  L+P+L+ +    +E  V ++         H+  LT SGK++A+G    
Sbjct: 349 ---GVGGNNAE-LSPRLIDAPLLGDELSVAVACGAR-----HSVVLTGSGKIFAWGWNKY 399

Query: 360 GQLGIELVNNQ 370
           GQLG+   NN+
Sbjct: 400 GQLGLGDCNNR 410



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P +  +LQG+ I+  AAG   T+ I++ G VY+FG + FG  + GV G     SP+L++
Sbjct: 306 SPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFG--QLGVGGNNAELSPRLID 363

Query: 97  S--LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
           +  L +   V  A G   + VL+  G+++ + W    +LG
Sbjct: 364 APLLGDELSVAVACGARHSVVLTGSGKIFAWGWNKYGQLG 403


>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
 gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
          Length = 575

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 148/342 (43%), Gaps = 55/342 (16%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
            AG G T ++++ G +Y  G    G    G     ++  P  ++    +F+ + A     
Sbjct: 220 TAGLGCTFIVTNDGCIYVCGHGQDGRLGLGTVNHVVIPRPIHLK----VFITKVASFYCG 275

Query: 113 TAVLSREGRVYTFSWGND--ARLGHH------------------TEPND---------VE 143
              L+  G     SWG++   +LGH                   ++P           +E
Sbjct: 276 QHALALTGNGIVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWME 335

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
            + ++ T+ +  +V IA G     + A       +++ GCG  G LGHG     K P+ +
Sbjct: 336 SYMVIDTISSKHIVDIACG---SDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKV 392

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E F+  ++  V  A G WH   +    R+ +WG G YG LG+G       P +V+ L  +
Sbjct: 393 EAFKDYHVSKV--ACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHI 450

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT--PQLVTSLK 321
               V  G   +F +S+DG ++S+G        +N   D   N  + ++   PQL+  L 
Sbjct: 451 LWAKVICGWDISFALSQDGYIWSWG--------YNG--DFMVNECSRLIVDEPQLLYRLA 500

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             ++++V +  +N      H  AL   G+LY +GA DKG+LG
Sbjct: 501 DQDKKIVDLGASN-----CHCVALAADGELYLWGANDKGRLG 537



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 9/228 (3%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           ++    I+  A G+  +  ISD+G+++ +G    G   +G   T+    P+ VE+ K+  
Sbjct: 342 TISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHG--DTETYKLPKKVEAFKDYH 399

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V + A G +    +  + R++++  G+  +LG+    N ++P  L+  L +I   ++  G
Sbjct: 400 VSKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQP-ILVEQLPHILWAKVICG 458

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           +    AL+       ++S G      +   SR     P+L+ +    + + V + A   H
Sbjct: 459 WDISFALS---QDGYIWSWGYNGDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGASNCH 515

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNE--ECESVPKVVQALNDVKAIHV 268
              +  DG +  WG    G LG+G++  +C + PK   AL DVK  H+
Sbjct: 516 CVALAADGELYLWGANDKGRLGNGSDIKDC-NFPKPCTALADVKLTHL 562



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 16/215 (7%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           + S  +++++ +  +V  A G+  +A +S  G ++T+  G    LGH     D E + L 
Sbjct: 334 MESYMVIDTISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGH----GDTETYKLP 389

Query: 149 GTLE---NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +E   +  V ++A G  ++LA+  Q     ++S G G  G+LG+G   +   P L+EQ
Sbjct: 390 KKVEAFKDYHVSKVACGCWHMLAIVNQNR---IWSWGHGHYGQLGNGQSANCLQPILVEQ 446

Query: 206 FQLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--ND 262
              +    V+     W  +  + QDG + +WG+     +   +      P+++  L   D
Sbjct: 447 LPHILWAKVICG---WDISFALSQDGYIWSWGYNGDFMVNECSRLIVDEPQLLYRLADQD 503

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            K + +   +     ++ DG++Y +G  +   LG+
Sbjct: 504 KKIVDLGASNCHCVALAADGELYLWGANDKGRLGN 538



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)

Query: 226 VGQDGRVCTWGWGRYGCLGHGN--EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           V +   V  WG  RY  LG  N  E+   VP V + ++++K   +  G   TF+V+ DG 
Sbjct: 175 VEKKTTVYAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTNDGC 234

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           +Y  G G+   LG   +         +V+ P+ +  LK      V I+   S Y   H  
Sbjct: 235 IYVCGHGQDGRLGLGTV--------NHVVIPRPI-HLK------VFITKVASFYCGQHAL 279

Query: 344 ALTESGKLYAFGAGDKGQLG 363
           ALT +G + ++G+   GQLG
Sbjct: 280 ALTGNGIVLSWGSNIYGQLG 299


>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 27/237 (11%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  + G   N+  VQ+   +  L+      S   +Y+ G G  G+LGH +  D   P+L+
Sbjct: 41  PQLVKGFNNNVAQVQMGQNHSALIT-----SEGELYTWGTGNSGQLGHNNDKDYITPQLV 95

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-------------RYGCLGHGNEEC 250
           E F   NL+   VA G +H   +  DG V TWG+G             + G LGHGN + 
Sbjct: 96  EFFTKHNLKVKQVALGDYHTVALTHDGDVWTWGYGGKEQNFLMDLLFLQVGALGHGNSKN 155

Query: 251 ESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
              P  V+AL  +K I ++ +G   T  ++E+ ++Y +G G+    G     DG  N+  
Sbjct: 156 RYTPTPVKALRSLKKIKYIQSGLRFTNAINENNELYVWGKGDYGVFG-----DGN-NKSF 209

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
           N+  PQ     +   ++   +S+      N ++ AL   G LY +G+ D GQ+G+++
Sbjct: 210 NI--PQRNEFFEGYLKKKQNLSIVKLKSCNNYSVALMSDGNLYGWGSNDFGQIGVKI 264



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 29/262 (11%)

Query: 58  RTMLISDAGQVYAFGKD--SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
           R  L S  G ++ +G    S G A    Q  K V+ PQLV+   N  V Q  +G   +A+
Sbjct: 6   RRYLFS-TGSLFTWGSSNGSLGYAVGSQQQMKGVSMPQLVKGFNNN-VAQVQMGQNHSAL 63

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPS 174
           ++ EG +YT+  GN  +LGH+ + + + P  +   T  N+ V Q+A G  + +AL     
Sbjct: 64  ITSEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLKVKQVALGDYHTVALTHDGD 123

Query: 175 GMAVYSVGCGLG-------------GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
              V++ G G               G LGHG+  +   P  ++  + L  +   + +G  
Sbjct: 124 ---VWTWGYGGKEQNFLMDLLFLQVGALGHGNSKNRYTPTPVKALRSLK-KIKYIQSGLR 179

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-------VVQALNDVKAIHVATGDYT 274
               + ++  +  WG G YG  G GN +  ++P+        ++   ++  + + + +  
Sbjct: 180 FTNAINENNELYVWGKGDYGVFGDGNNKSFNIPQRNEFFEGYLKKKQNLSIVKLKSCNNY 239

Query: 275 TFVVSEDGDVYSFGCGESASLG 296
           +  +  DG++Y +G  +   +G
Sbjct: 240 SVALMSDGNLYGWGSNDFGQIG 261


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 18  PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 76

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  N + P  + G L+N  V
Sbjct: 77  NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVV 136

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q V  
Sbjct: 137 VNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV-- 191

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 192 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHSA--- 248

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   ++ G VY +G C G+S +L H
Sbjct: 249 HTSAAKTQGGHVYMWGQCRGQSVTLPH 275



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 49  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 107

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 108 NNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 167

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 168 LGS--------SGNQPTPCRIAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGA 212

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 213 NSYGQLGTGNKSNQS 227



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 163 NGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 222

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE  + I  + A      +A  ++ G VY   WG
Sbjct: 223 KSNQSYPAPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYM--WG 264



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 17/132 (12%)

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNA 299
           GCLG G+ +    P+ +++LN  K   ++ G     V+ + +G+V+++        GHNA
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTW--------GHNA 56

Query: 300 IAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            +  G G  +  ++   + T+L   N++V +++       + H+  LT  G+++A+G  +
Sbjct: 57  YSQLGNGTTNHGLVPCHISTNLS--NKQVTEVACG-----SYHSLVLTSDGEVFAWGYNN 109

Query: 359 KGQLGIELVNNQ 370
            GQ+G     NQ
Sbjct: 110 SGQVGSGSTANQ 121


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 10/290 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-YIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q +++Q V  
Sbjct: 208 VNIACGQ--MCSMAVVDAG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  +    D +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
              ++ G+VY +G C G+S +L H        +  A   TP +   L  V
Sbjct: 323 AAKTQGGNVYMWGQCRGQSVTLPHLTRFSCTDDVFACFATPAVTWRLLSV 372



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ ++ + V           AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGIHVQRVACGY-------AHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  + ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPISVE 306



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGI + + A G   T++++D GQVYA+G +S+G+   G +  +   +P  VE
Sbjct: 247 TPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVE 306

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               I  + A      +A  ++ G VY   WG
Sbjct: 307 K-DRIIEIAACHSTHTSAAKTQGGNVYM--WG 335


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 63/360 (17%)

Query: 43  SLQGIRIIQAA----AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-----LVTSPQ 93
           S+Q +++   A    +G+  + +++ AG++Y  G    G+   G+Q          T   
Sbjct: 194 SIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKL--GIQSVNGMHVSKFTQVT 251

Query: 94  LVESLK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGH-HTEPNDVEPHPLLG 149
           + + +K N  V Q A G++ T  L ++G+V  F+WG     ++G  + +  + EP  + G
Sbjct: 252 MFDGIKVNQKVKQVACGDYHTLCLMQDGQV--FAWGGTLHKKVGEKNAQAQNNEPRIVSG 309

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG----LGGKLGHGSRTDEKHPRLIEQ 205
            L+   +V I  G  + +AL  Q     VYS G G      G+ GHG+  D + P  ++ 
Sbjct: 310 -LQGKQIVHIDCGDFHSVALDIQGR---VYSWGGGGASYNKGQCGHGNNEDIEQPIQVQG 365

Query: 206 FQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV------- 257
             + + + V ++AG +H  A+  +D  +  WG G YG  G G  +  S PK+V       
Sbjct: 366 --IAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFV 423

Query: 258 --QALNDVKA-----------IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
             Q +N ++              ++ G + T +++  G VYSFG G    LG  +     
Sbjct: 424 SNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTK--- 480

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                N  +PQLV  L   N + +         WN H+  L++ G L+A G G+ GQLG+
Sbjct: 481 -----NFCSPQLVKDLLSKNIKAIAAG------WN-HSLILSDKGDLFACGYGNHGQLGL 528



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 40/280 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           ++ Q A G   T+ +   GQV+A+G       GE     Q  +    P++V  L+   +V
Sbjct: 261 KVKQVACGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNE----PRIVSGLQGKQIV 316

Query: 105 QAAIGNFFTAVLSREGRVYTFSWG------NDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
               G+F +  L  +GRVY  SWG      N  + GH    +  +P  + G + +  +VQ
Sbjct: 317 HIDCGDFHSVALDIQGRVY--SWGGGGASYNKGQCGHGNNEDIEQPIQVQG-IAHRKIVQ 373

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-------------- 204
           I+AG  + LAL C+     +Y+ G G  G+ G G       P++++              
Sbjct: 374 ISAGGFHTLAL-CEEDN-ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQM 431

Query: 205 --QFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
             +F   + +P++  ++AG  H  ++   GRV ++G+G +G LG  + +    P++V+ L
Sbjct: 432 QNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDL 491

Query: 261 --NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
              ++KAI  A G   + ++S+ GD+++ G G    LG N
Sbjct: 492 LSKNIKAI--AAGWNHSLILSDKGDLFACGYGNHGQLGLN 529



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 32/324 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFS 126
           +++FGK+S GE     Q  + +  P  +++LK     +  + G+  +A++++ G +Y   
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSG 227

Query: 127 WGNDARLG-------HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
                +LG       H ++   V      G   N  V Q+A G  + L   C      V+
Sbjct: 228 SQLHGKLGIQSVNGMHVSKFTQVTM--FDGIKVNQKVKQVACGDYHTL---CLMQDGQVF 282

Query: 180 SVGCGLGGKLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           + G  L  K+G   ++     PR++   Q    Q V +  G +H+  +   GRV +WG G
Sbjct: 283 AWGGTLHKKVGEKNAQAQNNEPRIVSGLQ--GKQIVHIDCGDFHSVALDIQGRVYSWGGG 340

Query: 239 ----RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESA 293
                 G  GHGN E    P  VQ +   K + ++ G + T  +  ED ++Y++G G   
Sbjct: 341 GASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSG--- 397

Query: 294 SLGHNAIADGQGNRHANVLT-PQLVTSLKQVNERVVQISLTNSIYW-------NAHTFAL 345
           + G   + + Q +    ++  P+   S +++N+   + + ++             HT  L
Sbjct: 398 TYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLL 457

Query: 346 TESGKLYAFGAGDKGQLGIELVNN 369
           T  G++Y+FG G  GQLG+    N
Sbjct: 458 TSRGRVYSFGYGSHGQLGLRSTKN 481



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 31/285 (10%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD--SFG 77
           ++++ G++N   +  N  P     LQG +I+    G   ++ +   G+VY++G    S+ 
Sbjct: 288 LHKKVGEKNAQAQ--NNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYN 345

Query: 78  EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN----DARL 133
           + + G    + +  P  V+ + +  +VQ + G F T  L  E     ++WG+    +  L
Sbjct: 346 KGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNE-LYAWGSGTYGECGL 404

Query: 134 GHHTE---------PNDVEPHPLLGTLEN-------IPVV-QIAAGYCYLLALACQPSGM 176
           G             P D   +  +  ++N        P++ QI+AG  + L L    S  
Sbjct: 405 GEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLT---SRG 461

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            VYS G G  G+LG  S  +   P+L++   LL+     +AAG  H+ ++   G +   G
Sbjct: 462 RVYSFGYGSHGQLGLRSTKNFCSPQLVKD--LLSKNIKAIAAGWNHSLILSDKGDLFACG 519

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           +G +G LG  ++E  +    V  L    A ++  G   ++VV +D
Sbjct: 520 YGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVIDD 564


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 32/305 (10%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESL------KNIFVVQAAIGNFFTAVLSREGR 121
           VY++GK+ +G+   G+  T  V  P  + SL      KN+  + A  G   +AV++ +G 
Sbjct: 1   VYSWGKNKYGQ--LGLGHTNNVPLPTGILSLSDPLNRKNVRSIGA--GKSHSAVIAEDGD 56

Query: 122 VYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           VYT+  G + +LGH      ++EPH ++  +EN     +A G  + + +    +G+ +Y+
Sbjct: 57  VYTWGRGWEGQLGHDVVTEIELEPH-IVPKMENRGSSAVACGRNHTVVVT--DNGL-IYT 112

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 239
            G    G+LG G       P LI+    LNL  V+ +A G +H   +  +G + +WG  +
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDS--ALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G LGHGN +    P  V  +     I  A G   T V+++   +Y++G      LG N 
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLN- 229

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
                      VL P +V  L++     V    +       H+ AL ++ ++Y +G  D 
Sbjct: 230 ------RSDKAVLQPDIVDHLRRSGACHVLCGYS-------HSMALMKNEQIYTWGRNDC 276

Query: 360 GQLGI 364
           GQLG+
Sbjct: 277 GQLGL 281



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 21/260 (8%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI-FVVQAAIGNF 111
           A G   T++++D G +Y +G++  G+   G    K   SP L++S  N+  V+  A G F
Sbjct: 95  ACGRNHTVVVTDNGLIYTWGENKAGQ--LGTGDLKSSNSPVLIDSALNLPSVLSIACGEF 152

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC 171
            T  +  EG ++++      +LGH        P  ++G  + I  ++ A G  + L L  
Sbjct: 153 HTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQHTLVLT- 210

Query: 172 QPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
                 +Y+ G    G+LG  +R+D+    P +++  +      V+   G  H+  + ++
Sbjct: 211 --DANKIYAWGSNAYGQLGL-NRSDKAVLQPDIVDHLRRSGACHVL--CGYSHSMALMKN 265

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGD----- 283
            ++ TWG    G LG G+     VP++V AL  V+   +A G D+    V+++ +     
Sbjct: 266 EQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPP 325

Query: 284 ---VYSFGCGESASLGHNAI 300
              VYS+G GE   LGHN +
Sbjct: 326 LEHVYSWGRGEEGQLGHNEL 345



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           I+AA G   T++++DA ++YA+G +++G+     +  K V  P +V+ L+         G
Sbjct: 197 IRAACGGQHTLVLTDANKIYAWGSNAYGQLGLN-RSDKAVLQPDIVDHLRRSGACHVLCG 255

Query: 110 NFFTAVLSREGRVYTFSWG-NDA---RLGHHTEPNDVEPHP-LLGTLENIPVVQIAAGYC 164
              +  L +  ++YT  WG ND     LGH+T      P P L+  L ++ V QIA GY 
Sbjct: 256 YSHSMALMKNEQIYT--WGRNDCGQLGLGHYTH----SPVPELVTALRSVRVQQIACGYD 309

Query: 165 YLLALACQ------PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           + +A          P    VYS G G  G+LGH        PR++E
Sbjct: 310 HCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 20/221 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  A G   T+ I   G ++++G++  G+  +G   TK    P  V  +     ++AA 
Sbjct: 144 VLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHG--NTKTCYFPTQVVGMAKKICIRAAC 201

Query: 109 GNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G   T VL+   ++Y  +WG++A  +LG +     V    ++  L       +  GY + 
Sbjct: 202 GGQHTLVLTDANKIY--AWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHS 259

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           +AL        +Y+ G    G+LG G  T    P L+   + + +Q +  A G  H    
Sbjct: 260 MALM---KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQI--ACGYDHCVAF 314

Query: 227 GQDG---------RVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             D           V +WG G  G LGH        P++V+
Sbjct: 315 VADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 20/286 (6%)

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +LK  FV +   G+  T  L+ EG V+ +  G+   LG+    +D+E  P    +  +  
Sbjct: 296 ALKQEFV-KIVCGHHHTMALTEEGAVFIWGMGSQGCLGN-GRVDDLET-PTQIDISGLFF 352

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
            +IAAG  + LALA       VY  G    G+LG G++ ++  P+ +  F    +Q   +
Sbjct: 353 NEIAAGAYHSLALA---KNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYL 409

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
             G  H+A +  +  + TWG G Y  LGHG    E  PK ++ L DV  + VA G   + 
Sbjct: 410 YCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSL 469

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV--NERVVQISLTN 334
            ++ +G VY++G  + + LG          ++ +   PQ V  + Q   +    Q++   
Sbjct: 470 CITNEGFVYAWGSSKDSVLGMPT------QQYKDQTLPQRVGLMSQSFRDASFYQVAAGT 523

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           S     H+ +L+E+G LY +G+     LG+ L   Q     P++V+
Sbjct: 524 S-----HSLSLSENGHLYVWGSNKNSLLGVRL-QGQEHTCVPQKVE 563



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 40/331 (12%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           + G+   + AAGA  ++ ++   QVY +G ++ G+   G +  +L+         K I  
Sbjct: 347 ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQC 406

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
                G+  +A ++    +YT+  G+  RLGH    +++EP   +  L+++ V+ +A G 
Sbjct: 407 QYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKK-IEILQDVYVLDVALGT 465

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TDEKHPR---LIEQFQLLNLQPVVVAA 218
            + L   C  +   VY+ G      LG  ++   D+  P+   L+ Q    +     VAA
Sbjct: 466 IHSL---CITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQ-SFRDASFYQVAA 521

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           G  H+  + ++G +  WG  +   LG    G E    VP+ V+   D++           
Sbjct: 522 GTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEH-TCVPQKVEQSEDLEK---------- 570

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV----QIS 331
                        C E A   +    + Q  +   ++T +  T +K + +  +    +  
Sbjct: 571 ------------SCIEKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECK 618

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
              +     +T+ +  +G LYA G+  KG L
Sbjct: 619 YKFATLGTKNTYFIDNTGHLYACGSNQKGML 649



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVA-TGDYTTFVVS 279
           H   V   G    WG  +Y  LG G   +    P +++   + K I +A TG+  + +++
Sbjct: 699 HCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLT 758

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           + G+V+SFG  E   LGH             ++ P+++  +          S+ N    N
Sbjct: 759 DQGEVWSFGTSEFGVLGHEL------KNFYVIMEPRMINDIP---------SMINLACSN 803

Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
              FA+ +  +L+A+G    GQLGI L  ++ E
Sbjct: 804 QTMFAIDQKQQLWAWGNNQFGQLGISLQRDEEE 836



 Score = 39.3 bits (90), Expect = 3.2,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 133/359 (37%), Gaps = 82/359 (22%)

Query: 62   ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
            ++  G  Y +G + + +   G Q   + T   L  +++   ++ A  G  F+A+L+ +G 
Sbjct: 703  VTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGE 762

Query: 122  VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGM----- 176
            V++F       LGH  +   V   P +  + +IP          ++ LAC    M     
Sbjct: 763  VWSFGTSEFGVLGHELKNFYVIMEPRM--INDIPS---------MINLACSNQTMFAIDQ 811

Query: 177  --AVYSVGCGLGGKLGHGSRTDEK------HPRLIEQF-----QLLNL---------QP- 213
               +++ G    G+LG   + DE+      + ++  +F     QL +L         QP 
Sbjct: 812  KQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPERYIVYQPD 871

Query: 214  -------------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-------V 253
                           V+ G +H  ++  +  + T G  +Y   GH ++E E         
Sbjct: 872  KPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTCGLAKYA--GHQSQEPEDPEQQQAQQ 929

Query: 254  PKVVQALNDV------KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
             + + A +        K   VA  +Y T  V+   D+          LG      G   +
Sbjct: 930  AQFIDAFSSTLEHSSKKFKLVACHEYHTVAVTVSSDL--------VFLGPEGKERGLHEK 981

Query: 308  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
             AN+        ++  N + V            H   L + G+ Y +GA   G+LG+ +
Sbjct: 982  FANLFRDGKQMPVELQNIKFVACGPN-------HALILNDQGQTYTWGATMGGRLGLHI 1033


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 50/326 (15%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF------VVQAAIGNFFTAV 115
           + ++G V+ FGK  F                   ++L N F      VV  + G+  +AV
Sbjct: 8   VPESGAVFTFGKTRF------------------ADNLANKFWIRDDAVVNLSCGDEHSAV 49

Query: 116 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           ++  G++YTF   +  +LGH    +  +P  ++  L+   V  +A G  + +A     SG
Sbjct: 50  VTANGKLYTFGCNDWGQLGHGNTKSYTKP-SVVKKLKPEKVYMVACGRNHTIAAT--ESG 106

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
             +YS GCG  G+LGHG   D   P++IE   +   + +  A G+  +A + ++G + TW
Sbjct: 107 H-LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL--ACGSDFSAAITENGELYTW 163

Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
           G    G  G G +    +P  +     V+   V+ G Y   VV+EDG +Y  G  E   L
Sbjct: 164 GSCGEGQNGLGEDT--EIPTRLHLHGKVRM--VSCGYYHMAVVTEDGSLYMCGEKEGGKL 219

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G +         H  +     +  +K + ++VV  +          T  +T++G +Y FG
Sbjct: 220 GLD---------HEQLDNTSQLQKIKSIEDQVVVAACGAEF-----TAVVTKNGSVYTFG 265

Query: 356 AGDKGQLGIELVNNQTERGNPERVDI 381
            G++GQLG+     +TE   PER+ +
Sbjct: 266 QGNQGQLGLGSSMMETEF--PERIPL 289



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 34/335 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  + G   + +++  G++Y FG + +G+  +G   TK  T P +V+ LK   V   A 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG--NTKSYTKPSVVKKLKPEKVYMVAC 94

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   T   +  G +Y+F  G D +LGH     D E   +   +E + V +     C    
Sbjct: 95  GRNHTIAATESGHLYSFGCGGDGQLGH----GDAEDSHVPKIIEGLDVQKYKHLACGSDF 150

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
            A       +Y+ G    G+ G G  T+      I     L+ +  +V+ G +H AVV +
Sbjct: 151 SAAITENGELYTWGSCGEGQNGLGEDTE------IPTRLHLHGKVRMVSCGYYHMAVVTE 204

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKV--VQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           DG +   G    G LG  +E+ ++  ++  ++++ D + +  A G   T VV+++G VY+
Sbjct: 205 DGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYT 263

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           FG G    L       G G+       P+ +   ++V  R V           + T  +T
Sbjct: 264 FGQGNQGQL-------GLGSSMMETEFPERIPLFEKVKARTVSCG-------ESFTAVIT 309

Query: 347 ESGKLYAFGAGDKGQLGI--ELVNNQTERGNPERV 379
           + G LY FG G  G+LG+  E  +N  +   PE+V
Sbjct: 310 KHGNLYTFGDGRHGKLGLGDECFSNTFK---PEKV 341



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 20/225 (8%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNF 111
           A G+  +  I++ G++Y +G  S GE + G+ + T++ T   L   ++ +     + G +
Sbjct: 145 ACGSDFSAAITENGELYTWG--SCGEGQNGLGEDTEIPTRLHLHGKVRMV-----SCGYY 197

Query: 112 FTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             AV++ +G +Y        +LG  H + ++      + ++E+    Q+    C     A
Sbjct: 198 HMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED----QVVVAACGAEFTA 253

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
                 +VY+ G G  G+LG GS   E + P  I  F+   ++   V+ G    AV+ + 
Sbjct: 254 VVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFE--KVKARTVSCGESFTAVITKH 311

Query: 230 GRVCTWGWGRYGCLGHGNEECES---VPKVVQALNDVKAIHVATG 271
           G + T+G GR+G LG G +EC S    P+ V+  N+     V  G
Sbjct: 312 GNLYTFGDGRHGKLGLG-DECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 6/126 (4%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQA 106
           +++ AA GA  T +++  G VY FG+ +  + + G+  + + T  P+ +   + +     
Sbjct: 241 QVVVAACGAEFTAVVTKNGSVYTFGQGN--QGQLGLGSSMMETEFPERIPLFEKVKARTV 298

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQIAAGYC 164
           + G  FTAV+++ G +YTF  G   +LG   E   N  +P  +     N  V  +  G C
Sbjct: 299 SCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK-RFNNFTVKMVTCGGC 357

Query: 165 YLLALA 170
           ++L  A
Sbjct: 358 HMLVAA 363


>gi|380490700|emb|CCF35832.1| hypothetical protein CH063_07530 [Colletotrichum higginsianum]
          Length = 521

 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 32/288 (11%)

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE--PHPLLGTLENI 154
           S + + VVQ A G      L+R+GRV T+   +D  LG    P+  E  P  LLG  E+ 
Sbjct: 77  SPETVGVVQVAAGGMHCVALTRDGRVLTWGVNDDGALGRKKSPDTPEEGPEDLLGPFEST 136

Query: 155 P----------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           P          +VQ+AA      AL  + +   VY  G   GG  G+     EK P+  E
Sbjct: 137 PGQVDFQEDVDIVQVAATNSACFALTAEGT---VYGWGSFAGGD-GNFGFLHEKPPKTTE 192

Query: 205 QF--QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--- 258
           +   ++  L+ +  +A GA HA  +  DG V  WG G    LG    E      ++    
Sbjct: 193 RLPVRVPGLENIAQLAGGANHALALTNDGNVLAWGSGEQNELGRRILERRRFDTLLPQRI 252

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
            L   K   +  G + +F +   G V++FG     + G   I   +      V++P +V 
Sbjct: 253 GLPKNKTAKIFAGSHHSFAIDTAGKVWAFGLN---NFGQCGIPTREDTGFTTVISPTMVK 309

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
           SL + + R +   L        H+ A T+SGK+  +G  D GQ+GI+L
Sbjct: 310 SLAEYDIRHIAGGL-------HHSIACTKSGKILVWGRCDDGQMGIDL 350



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 36/209 (17%)

Query: 182 GCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQP-----VVVAAGAWHAAVVGQDGRVCTW 235
           G G   +LG G R T+   PRL  +    +L P     V VAAG  H   + +DGRV TW
Sbjct: 50  GSGENCELGLGPRITEAPRPRLAHK----HLSPETVGVVQVAAGGMHCVALTRDGRVLTW 105

Query: 236 GWGRYGCLGH---------GNEEC----ESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           G    G LG          G E+     ES P  V    DV  + VA  +   F ++ +G
Sbjct: 106 GVNDDGALGRKKSPDTPEEGPEDLLGPFESTPGQVDFQEDVDIVQVAATNSACFALTAEG 165

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-H 341
            VY +G          + A G GN     L  +   + +++  RV  +     +   A H
Sbjct: 166 TVYGWG----------SFAGGDGN--FGFLHEKPPKTTERLPVRVPGLENIAQLAGGANH 213

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             ALT  G + A+G+G++ +LG  ++  +
Sbjct: 214 ALALTNDGNVLAWGSGEQNELGRRILERR 242



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 31/278 (11%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFG---------KDSFGEAEYGVQGT--KLVTS 91
           S + + ++Q AAG    + ++  G+V  +G         K S    E G +       ++
Sbjct: 77  SPETVGVVQVAAGGMHCVALTRDGRVLTWGVNDDGALGRKKSPDTPEEGPEDLLGPFEST 136

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN----DARLG--HHTEPNDVEPH 145
           P  V+  +++ +VQ A  N     L+ EG VY   WG+    D   G  H   P   E  
Sbjct: 137 PGQVDFQEDVDIVQVAATNSACFALTAEGTVY--GWGSFAGGDGNFGFLHEKPPKTTERL 194

Query: 146 PL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
           P+ +  LENI   Q+A G  + LAL    +   V + G G   +LG       +   L+ 
Sbjct: 195 PVRVPGLENI--AQLAGGANHALALT---NDGNVLAWGSGEQNELGRRILERRRFDTLLP 249

Query: 205 Q-FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-----PKVVQ 258
           Q   L   +   + AG+ H+  +   G+V  +G   +G  G    E         P +V+
Sbjct: 250 QRIGLPKNKTAKIFAGSHHSFAIDTAGKVWAFGLNNFGQCGIPTREDTGFTTVISPTMVK 309

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
           +L +    H+A G + +   ++ G +  +G  +   +G
Sbjct: 310 SLAEYDIRHIAGGLHHSIACTKSGKILVWGRCDDGQMG 347



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 115/300 (38%), Gaps = 39/300 (13%)

Query: 17  PDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF 76
           PD   E  G  +LLG     TP      + + I+Q AA       ++  G VY +G  + 
Sbjct: 119 PDTPEE--GPEDLLG-PFESTPGQVDFQEDVDIVQVAATNSACFALTAEGTVYGWGSFAG 175

Query: 77  GEAEYGVQGTKLVTS----PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           G+  +G    K   +    P  V  L+NI   Q A G      L+ +G V  +  G    
Sbjct: 176 GDGNFGFLHEKPPKTTERLPVRVPGLENI--AQLAGGANHALALTNDGNVLAWGSGEQNE 233

Query: 133 LGHHTEPN---DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
           LG         D      +G  +N    +I AG  +  A+    +   V++ G    G+ 
Sbjct: 234 LGRRILERRRFDTLLPQRIGLPKN-KTAKIFAGSHHSFAID---TAGKVWAFGLNNFGQC 289

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLG-- 244
           G  +R D     +I    + +L       +A G  H+    + G++  WG    G +G  
Sbjct: 290 GIPTREDTGFTTVISPTMVKSLAEYDIRHIAGGLHHSIACTKSGKILVWGRCDDGQMGID 349

Query: 245 -------------HGNEECESVPKVVQALN---DVKAIHVATGDYTTFVVSEDGDVYSFG 288
                         G     +VP  V   +   D +A+ VA G    FV+++  ++Y++G
Sbjct: 350 LDRVPRDHIIFDYRGRPRVLNVPTEVSIPDHSPDSQAVFVAAGIDNCFVIAK--ELYAWG 407


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 30/280 (10%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVV 104
            +RIIQ +AG   +M +SD G+++A+G +S G  +  + G  L++ +P+ V SL     V
Sbjct: 99  AVRIIQISAGRSHSMAVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TV 154

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           Q A G   T  L+  GRV+ +   +D R+ H   P +VE         ++P++QI+AG  
Sbjct: 155 QVACGASHTVSLNGGGRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNL 206

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           + +AL    SG  +++ G    G+LG+ +  D  +PR +     +    VVV  G  H+ 
Sbjct: 207 FTMALTA--SG-TLFAWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSI 259

Query: 225 VVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
            +  +GRV + G   +G LG G     ++  + +  +       +A G   T VV+ +G 
Sbjct: 260 ALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGK 318

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +++FG   +  LGH       GN   N +TP+++ S++ V
Sbjct: 319 MHTFGLNSNGQLGH-------GNTR-NQITPRMIDSVENV 350



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 102
            G+ +   A+G   T+ +++ G+V++ G +  GE   G   +G+  +    +  +++   
Sbjct: 45  HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 161
           ++Q + G   +  +S +GR+  F+WG+++  G      D+        + ++P  VQ+A 
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + ++L     G  V+  G    G++ H        P  +E F  +++  + ++AG  
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
               +   G +  WG    G LG+        P+ V  +N V  + V  GD  +  ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V+S G      LG      GQ +R  N +    +T +  +   V +I+         H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           T  +  +GK++ FG    GQLG     NQ     P  +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)

Query: 67  QVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 118
           Q+Y FG  S G+  +         +++  P LV         + V   A G   T  L+ 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 119 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
           +G+V++     +  LG    +      +P+  +   + ++QI+AG  + +A++       
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120

Query: 178 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
           +++ G    G+L        S T ++ P L E  Q        VA GA H   +   GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             WG    G + H        P  V+    V  I ++ G+  T  ++  G ++++G  E 
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG+        NR  +V+ P+ V ++  V   VV+         ++H+ ALT  G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268

Query: 353 AFGAGDKGQLG 363
           + G+   GQLG
Sbjct: 269 SCGSDSFGQLG 279



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 47/272 (17%)

Query: 121 RVYTFSWGNDARLGH--HTEPNDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 171
           ++Y F   +D +L    ++  ND +    PH + G       + V  +A+G  + L LA 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63

Query: 172 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 230
             +   V+S G    G+LG G   +  +   I    + N ++ + ++AG  H+  V  DG
Sbjct: 64  --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119

Query: 231 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           R+  WG   +G L   G+      PK V +L +   + VA G   T  ++  G V+ +G 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
                + H               +P  V     V+  ++QIS  N       T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215

Query: 350 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 379
            L+A+G  ++GQLG     N T R   NP  V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           VKA  VA+G+  T  ++ DG V+S G   +  LG   + +G     +  + P  +++   
Sbjct: 49  VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 377
              R++QIS   S     H+ A+++ G+L+A+G+   GQL +    L+++  +R    PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152

Query: 378 RVDI 381
            V +
Sbjct: 153 TVQV 156


>gi|383319323|ref|YP_005380164.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
 gi|379320693|gb|AFC99645.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
          Length = 476

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 155/355 (43%), Gaps = 47/355 (13%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           I + + A G   T+ ++D G V+A+G +++GE   G     ++  P ++  L+   V   
Sbjct: 29  IGVKKVAVGLFHTVALADDGTVWAWGSNTYGECGEG-SSDDILLKPVMINGLEG--VKDV 85

Query: 107 AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGY 163
           A+GN F+  L  +G V+T  WG++   +LG  T  +   P P+ +  L N+    IA   
Sbjct: 86  AVGNNFSMALKSDGTVWT--WGDNRYGQLGIGTADDGRHPEPVQVPGLTNV----IAISA 139

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP---------- 213
            + LA+A +  G  V++ G    G+LG G   D   P    +   +  +P          
Sbjct: 140 DFQLAMALKDDG-TVWAWGSNSYGQLGDGKPIDIPPPLTYSKEWDMQNKPSPVMVSGLDH 198

Query: 214 -VVVAAGAWHAAVVGQDGRVCTWGWGRYGC-LGHGNEECE-----SVPKVVQALNDVKAI 266
            V + A  W A  V  DG V  WGWG+  C LG  ++  E     S P  +  L DVK  
Sbjct: 199 VVSIDASGWQAFAVKDDGTV--WGWGQNTCTLGEWSKNNENSLYTSTPVQIVGLTDVKK- 255

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
               G  +   + +DG V+++G      LG+  +          V  P  V  L      
Sbjct: 256 ACCLGGLSAVALKKDGTVWAWGEDRYGVLGNGEVKSYP--DVDKVYNPIQVIGLTD---- 309

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           +V IS        AH+ AL + G ++A+G    GQLG    +    RG P RV I
Sbjct: 310 IVDISCG-----GAHSLALKDDGTVWAWGKNYAGQLGD---STNESRGTPCRVPI 356


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 30/280 (10%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVV 104
            +RIIQ +AG   +M +SD G+++A+G +S G  +  + G  L++ +P+ V SL     V
Sbjct: 99  AVRIIQISAGRSHSMAVSDDGRLFAWGSNSHG--QLAMSGDILISDTPKRVPSLPE--TV 154

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           Q A G   T  L+  GRV+ +   +D R+ H   P +VE         ++P++QI+AG  
Sbjct: 155 QVACGASHTVSLNGGGRVFIWGQQSDGRIRH--SPAEVE------LFVSVPIIQISAGNL 206

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           + +AL    SG  +++ G    G+LG+ +  D  +PR +     +    VVV  G  H+ 
Sbjct: 207 FTMALTA--SG-TLFAWGRNEEGQLGNFTNRDVINPREVPNINSV----VVVECGDSHSI 259

Query: 225 VVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
            +  +GRV + G   +G LG G     ++  + +  +       +A G   T VV+ +G 
Sbjct: 260 ALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA-NGK 318

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +++FG   +  LGH       GN   N +TP+++ S++ V
Sbjct: 319 MHTFGLNSNGQLGH-------GNTR-NQITPRMIDSVENV 350



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 41/339 (12%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIF 102
            G+ +   A+G   T+ +++ G+V++ G +  GE   G   +G+  +    +  +++   
Sbjct: 45  HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--- 101

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP-VVQIAA 161
           ++Q + G   +  +S +GR+  F+WG+++  G      D+        + ++P  VQ+A 
Sbjct: 102 IIQISAGRSHSMAVSDDGRL--FAWGSNSH-GQLAMSGDILISDTPKRVPSLPETVQVAC 158

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + ++L     G  V+  G    G++ H        P  +E F  +++  + ++AG  
Sbjct: 159 GASHTVSLN---GGGRVFIWGQQSDGRIRHS-------PAEVELF--VSVPIIQISAGNL 206

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
               +   G +  WG    G LG+        P+ V  +N V  + V  GD  +  ++ +
Sbjct: 207 FTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSV--VVVECGDSHSIALTHE 264

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V+S G      LG      GQ +R  N +    +T +  +   V +I+         H
Sbjct: 265 GRVFSCGSDSFGQLGC-----GQPSRSQNCMRG--ITEM--LGSHVTRIACGR-----CH 310

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           T  +  +GK++ FG    GQLG     NQ     P  +D
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQI---TPRMID 345



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 50/311 (16%)

Query: 67  QVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKN----IFVVQAAIGNFFTAVLSR 118
           Q+Y FG  S G+  +         +++  P LV         + V   A G   T  L+ 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 119 EGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA 177
           +G+V++     +  LG    +      +P+  +   + ++QI+AG  + +A++       
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQISAGRSHSMAVS---DDGR 120

Query: 178 VYSVGCGLGGKLGHG-----SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
           +++ G    G+L        S T ++ P L E  Q        VA GA H   +   GRV
Sbjct: 121 LFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ--------VACGASHTVSLNGGGRV 172

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             WG    G + H        P  V+    V  I ++ G+  T  ++  G ++++G  E 
Sbjct: 173 FIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEE 225

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG+        NR  +V+ P+ V ++  V   VV+         ++H+ ALT  G+++
Sbjct: 226 GQLGNFT------NR--DVINPREVPNINSV--VVVECG-------DSHSIALTHEGRVF 268

Query: 353 AFGAGDKGQLG 363
           + G+   GQLG
Sbjct: 269 SCGSDSFGQLG 279



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 47/272 (17%)

Query: 121 RVYTFSWGNDARLGH--HTEPNDVE----PHPLLGT---LENIPVVQIAAGYCYLLALAC 171
           ++Y F   +D +L    ++  ND +    PH + G       + V  +A+G  + L LA 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLA- 63

Query: 172 QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN-LQPVVVAAGAWHAAVVGQDG 230
             +   V+S G    G+LG G   +  +   I    + N ++ + ++AG  H+  V  DG
Sbjct: 64  --NDGKVWSCGSNYNGELGRGGVKEGSYT--IYPVHISNAVRIIQISAGRSHSMAVSDDG 119

Query: 231 RVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           R+  WG   +G L   G+      PK V +L +   + VA G   T  ++  G V+ +G 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ 177

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
                + H               +P  V     V+  ++QIS  N       T ALT SG
Sbjct: 178 QSDGRIRH---------------SPAEVELF--VSVPIIQISAGN-----LFTMALTASG 215

Query: 350 KLYAFGAGDKGQLGIELVNNQTERG--NPERV 379
            L+A+G  ++GQLG     N T R   NP  V
Sbjct: 216 TLFAWGRNEEGQLG-----NFTNRDVINPREV 242



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 21/124 (16%)

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           VKA  VA+G+  T  ++ DG V+S G   +  LG   + +G     +  + P  +++   
Sbjct: 49  VKA--VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-----SYTIYPVHISNAV- 100

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE---LVNNQTER--GNPE 377
              R++QIS   S     H+ A+++ G+L+A+G+   GQL +    L+++  +R    PE
Sbjct: 101 ---RIIQISAGRS-----HSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPE 152

Query: 378 RVDI 381
            V +
Sbjct: 153 TVQV 156


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 36/328 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  + L+   I+  AAG   ++ +   G V+A+G ++ GE   G+   K    P  V+
Sbjct: 134 TPVKVKELK--NIVAIAAGWDFSLAVGSDGSVWAWGINNHGE--LGIGSLKPSAVPVKVK 189

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIP 155
            LK++  V A +  + +  L R+G V+++ +  D  LG+  TE   V     +  L +  
Sbjct: 190 GLKDVVAVSAGL--YHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-- 245

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ I+AG  + +AL       AV+  G G+  K G   + D  +  +  + + LN + V 
Sbjct: 246 VIAISAGGFHSIALNKDG---AVWIWGGGIIEKNG---KIDNSYIPV--RIRWLN-KVVA 296

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +AAG  H+  +  DG V  WG   YG LG    E   +P  V+ L +V A  VA G   +
Sbjct: 297 IAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKNVVA--VAAGRLHS 354

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             ++++G ++++G        +NA   GQ  R  N  +  L   +K + + VV I+   S
Sbjct: 355 VALTKNGTIWAWG--------NNAF--GQLGRENNSFSLNLPYKVKWL-DNVVAIAAGGS 403

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                HT A+   G ++++GA +KGQLG
Sbjct: 404 -----HTLAIKRDGTVWSWGANNKGQLG 426



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 172/374 (45%), Gaps = 53/374 (14%)

Query: 41  CRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
            + LQG   ++I + AG+  T+ I D G V+A+G + FG+   G      +  P  V+ L
Sbjct: 34  SKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI--PVRVKGL 91

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
           K++  V A  G F +  L ++G V+ +   N  +       +   P  +   L+NI  V 
Sbjct: 92  KDVVAVSA--GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKV-KELKNI--VA 146

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           IAAG+ + LA+    S   V++ G    G+LG GS      P  ++  +      V V+A
Sbjct: 147 IAAGWDFSLAVGSDGS---VWAWGINNHGELGIGSLKPSAVPVKVKGLK----DVVAVSA 199

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTF 276
           G +H+  + +DG V +WG+   G LG+   E    SVP  V+ L+DV  I ++ G + + 
Sbjct: 200 GLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDV--IAISAGGFHSI 257

Query: 277 VVSEDGDVYSFGCGESASLG--------------HNAIADGQGNRHANVLTPQ------- 315
            +++DG V+ +G G     G              +  +A   G RH+  L          
Sbjct: 258 ALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG 317

Query: 316 ------LVTSLKQVNERVVQIS-LTNSIYWNA---HTFALTESGKLYAFGAGDKGQLGIE 365
                 L +++ + +   VQ+  L N +   A   H+ ALT++G ++A+G    GQLG E
Sbjct: 318 HNSYGVLGSNVGEHSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRE 377

Query: 366 LVNNQTERGNPERV 379
             NN      P +V
Sbjct: 378 --NNSFSLNLPYKV 389



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 40/328 (12%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           + +   AG+  ++ +   G V+ +G   F E+ +  + TK + SP  ++  K   + + A
Sbjct: 444 KAVLVEAGSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIA 500

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYL 166
            G  +  VL ++G ++    GND      T+ + V     L  L+NI  V+ IAAGY + 
Sbjct: 501 GGLDYILVLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHS 557

Query: 167 LALACQPSGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHA 223
           LA+    +   V+S G   L  K        EK+    E+  ++  L  VV VAAG +H+
Sbjct: 558 LAVRTDGT---VWSWGDTNLDNK--------EKYLNFSEKPVKIKGLSGVVKVAAGKYHS 606

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             + +DG V +WG+  YG LG+G  E   VP  V+ LN+V AI  A GDY +  + +DG 
Sbjct: 607 LALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGT 664

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V+ +G      LG   I             P  V  L    + VV I+  ++     H+ 
Sbjct: 665 VWVWGSNIRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSV 707

Query: 344 ALTESGKLYAFGAGDKGQLGIELVNNQT 371
           AL + G ++ +G      L  E++++ +
Sbjct: 708 ALKKDGTVWVWGIECDRDLSKEILSSSS 735



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S  + K+    ++ Q  N + +   AG+ H   +  DG V  WG+  +G LG+G  +   
Sbjct: 24  SNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSC 83

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +P  V+ L DV A  V+ G + +  + +DG V+ +        GH      + + + +  
Sbjct: 84  IPVRVKGLKDVVA--VSAGTFHSLALKKDGSVWIW--------GHTNYGQRKSDVYRDFT 133

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           TP  V  LK     +V I+      W+  + A+   G ++A+G  + G+LGI
Sbjct: 134 TPVKVKELKN----IVAIAAG----WD-FSLAVGSDGSVWAWGINNHGELGI 176



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 15/192 (7%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           VV  A G   +  L  +G V+   WG+++   LG +   +   P  + G L+N  VV +A
Sbjct: 294 VVAIAAGYRHSIALKDDGTVWV--WGHNSYGVLGSNVGEHSFLPVQVKG-LKN--VVAVA 348

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           AG  + +AL    +   +++ G    G+LG     +     L  + + L+   V +AAG 
Sbjct: 349 AGRLHSVALTKNGT---IWAWGNNAFGQLGR--ENNSFSLNLPYKVKWLD-NVVAIAAGG 402

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            H   + +DG V +WG    G LG+G  +   +P  V+ LN  KA+ V  G   +  V +
Sbjct: 403 SHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLN--KAVLVEAGSQHSLAVDK 460

Query: 281 DGDVYSFGCGES 292
           DG V+ +G  ES
Sbjct: 461 DGTVWVWGFIES 472


>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Acromyrmex echinatior]
          Length = 2956

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 33/252 (13%)

Query: 111  FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPL-LGTLENIPVVQIAAGYCYL 166
            F    L R G +YT  WG+  +    T  + +    PH +       I V  ++ G+C+ 
Sbjct: 1900 FSHVALVRNGNIYT--WGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHT 1957

Query: 167  LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHAA 224
            LA+    +   +Y+ G    G+LG G       P L+        Q ++V   AG +H+ 
Sbjct: 1958 LAV----TNNGIYAWGASQFGQLGLGKVLQCSSPELVTSLA----QEIIVDAVAGQYHSV 2009

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
             +  DGR+ TWGWG +G LGHGN + +++P +V+AL  +    ++ G   T  +S DG +
Sbjct: 2010 ALTADGRIFTWGWGVHGQLGHGNTDEKAIPSLVKALLGIVVCCISAGYAHTLALSIDGVL 2069

Query: 285  YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
            Y+FGC     LG         N  ++V    +  SL        +I+L ++ Y+  H  A
Sbjct: 2070 YAFGCNILGQLGTG------DNIKSSV---PIKVSLPD------RITLISTGYF--HNLA 2112

Query: 345  LTESGKLYAFGA 356
            ++ + KLY +GA
Sbjct: 2113 VSNTNKLYIWGA 2124



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)

Query: 36   GTP---LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
            GTP    + +S++ I +   + G   T+ +++ G +YA+G   FG+   G+      +SP
Sbjct: 1932 GTPHAICFFKSMK-IEVFSVSCGHCHTLAVTNNG-IYAWGASQFGQ--LGLGKVLQCSSP 1987

Query: 93   QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
            +LV SL    +V A  G + +  L+ +GR++T+ WG   +LGH        P  L+  L 
Sbjct: 1988 ELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEKAIP-SLVKALL 2046

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
             I V  I+AGY + LAL+       +Y+ GC + G+LG G       P  +     L  +
Sbjct: 2047 GIVVCCISAGYAHTLALSIDG---VLYAFGCNILGQLGTGDNIKSSVPIKVS----LPDR 2099

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWG 236
              +++ G +H   V    ++  WG
Sbjct: 2100 ITLISTGYFHNLAVSNTNKLYIWG 2123



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 17/187 (9%)

Query: 178  VYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            +Y+ G  + G LG GS       P  I  F+ + ++   V+ G  H   V  +G +  WG
Sbjct: 1911 IYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYAWG 1969

Query: 237  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              ++G LG G     S P++V +L     +    G Y +  ++ DG ++++G G    LG
Sbjct: 1970 ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLG 2029

Query: 297  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
            H       GN     + P LV +L  +      +   ++ Y  AHT AL+  G LYAFG 
Sbjct: 2030 H-------GNTDEKAI-PSLVKALLGI-----VVCCISAGY--AHTLALSIDGVLYAFGC 2074

Query: 357  GDKGQLG 363
               GQLG
Sbjct: 2075 NILGQLG 2081


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 140/322 (43%), Gaps = 32/322 (9%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG   ++ +   G V+A+G +SF  +  G+ G +   SP  V+  K   V   A G   
Sbjct: 483 AAGKTHSLALLADGTVWAWGDNSF--SALGL-GDEPGASPTPVQVPKLAGVRSLAAGENS 539

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +  +   G V  + +G   +LG  +      P P+ G L  I    +A G+ Y LAL   
Sbjct: 540 SLAVLANGTVMAWGYGLFGQLGSESASIFQIPEPIFG-LSGI--TAVAMGHWYSLALRED 596

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
            +   V+S G    G+LG G+ TDE+ PR  +   L   Q   +AAGA HA  +  DG V
Sbjct: 597 GT---VWSWGYNASGQLGDGT-TDER-PRPGQVAGLT--QVTAIAAGASHALALRADGTV 649

Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             WG    G LG G +   S P  VQ L  V  I VA G+Y +  + EDG V+S+G    
Sbjct: 650 WAWGSNALGTLGDGTQTSRSTPVQVQGLTGV--IAVAAGEYHSLALREDGTVWSWGNNNE 707

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LG    +  Q        +P  V  L  V +R+             H  A  E G L 
Sbjct: 708 GQLGDVTASSRQ--------SPGQVPGLAGV-QRIAAG--------EKHALAAVEGGPLV 750

Query: 353 AFGAGDKGQLGIELVNNQTERG 374
           AFG    GQLG+        RG
Sbjct: 751 AFGKNTSGQLGLGERKENQSRG 772



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 151/347 (43%), Gaps = 40/347 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L G+R +  AAG   ++ +   G V A+G   FG+   G +   +   P+ + 
Sbjct: 520 TPVQVPKLAGVRSL--AAGENSSLAVLANGTVMAWGYGLFGQ--LGSESASIFQIPEPIF 575

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L  I  V  A+G++++  L  +G V+++ +    +LG  T      P  + G  +   V
Sbjct: 576 GLSGITAV--AMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQ---V 630

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             IAAG  + LAL    +   V++ G    G LG G++T    P  ++    +    + V
Sbjct: 631 TAIAAGASHALALRADGT---VWAWGSNALGTLGDGTQTSRSTPVQVQGLTGV----IAV 683

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG +H+  + +DG V +WG    G LG         P  V  L  V+   +A G+    
Sbjct: 684 AAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLAGVQ--RIAAGEKHAL 741

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
              E G + +FG   S  LG        G R  N    + + SL+  N R +   +    
Sbjct: 742 AAVEGGPLVAFGKNTSGQLG-------LGERKENQSRGE-IASLR--NPRGIAAGI---- 787

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
              AHT A+   G ++A+GA   GQLG     N     +P+ + + L
Sbjct: 788 ---AHTLAVAADGTVWAWGANATGQLG-----NGEAANSPQPITVKL 826



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHT 137
           E+G+   +     + V  L ++  V A  GN     L  +G V+  +WG++   +LG  T
Sbjct: 156 EWGLSYLRFDGGVRPVPGLTDVRAVSA--GNEHALALRTDGTVW--AWGSNFAGQLGDGT 211

Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
           + +   P  ++G  E I V   AAGY    +LA +  G  V++ G    G+LG G+    
Sbjct: 212 KTSRSTPVQVVGLTEVIAVS--AAGYS---SLALRKDGT-VWAWGDNESGQLGDGTMEGR 265

Query: 198 KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
             P      Q+L+L  V  +AAG  H+  V  DG V  WG   YG LG G    E  P+ 
Sbjct: 266 LTP-----VQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRP 320

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
           V        + VA     +F V  DG V S+G     +LG          + +N   P  
Sbjct: 321 VAVSKLTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGV--------EQRSNSRVPSK 372

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V  L  V    V            +  AL   G + ++G  D GQLG
Sbjct: 373 VFGLTDVATVSVG---------GYYAVALMGDGTVRSWGNNDSGQLG 410



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 151/394 (38%), Gaps = 87/394 (22%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L  +R+   AAG G ++ +   G V A+G + +G  + G  G  L  +P+ V 
Sbjct: 267 TPVQVLDL--VRVTGLAAGRGHSLAVLADGTVRAWGANIYG--QLGDGGFSLEGNPRPVA 322

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENI 154
             K   VV  A     +  +  +G V   SWG+  D  LG     N   P  + G  +  
Sbjct: 323 VSKLTDVVSVAASTSLSFAVHSDGTVS--SWGSNVDGALGVEQRSNSRVPSKVFGLTD-- 378

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS------------------RTD 196
            V  ++ G  Y +AL    +   V S G    G+LG G+                     
Sbjct: 379 -VATVSVGGYYAVALMGDGT---VRSWGNNDSGQLGDGTYIRHTPTPVPGLTGVTAVSAG 434

Query: 197 EKH---------PRLIEQFQLLNL-------------------QPVVVAAGAWHAAVVGQ 228
           E H         PR+    Q + L                   +  +VAAG  H+  +  
Sbjct: 435 EDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEASLVAAGKTHSLALLA 494

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V  WG   +  LG G+E   S P  VQ         +A G+ ++  V  +G V ++G
Sbjct: 495 DGTVWAWGDNSFSALGLGDEPGAS-PTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWG 553

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI---YWNAHTFAL 345
            G    LG  +                   S+ Q+ E +  +S   ++   +W  ++ AL
Sbjct: 554 YGLFGQLGSES------------------ASIFQIPEPIFGLSGITAVAMGHW--YSLAL 593

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            E G ++++G    GQLG    +   ER  P +V
Sbjct: 594 REDGTVWSWGYNASGQLGDGTTD---ERPRPGQV 624



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  ++AG  + LAL    +   V++ G    G+LG G++T    P      Q++ L  V+
Sbjct: 177 VRAVSAGNEHALALRTDGT---VWAWGSNFAGQLGDGTKTSRSTP-----VQVVGLTEVI 228

Query: 216 -VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            V+A  + +  + +DG V  WG    G LG G  E    P  VQ L+ V+   +A G   
Sbjct: 229 AVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTP--VQVLDLVRVTGLAAGRGH 286

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  V  DG V ++G      LG    +  +GN       P  V+ L  V    V ++ + 
Sbjct: 287 SLAVLADGTVRAWGANIYGQLGDGGFSL-EGNPR-----PVAVSKLTDV----VSVAAST 336

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           S+     +FA+   G + ++G+   G LG+E  +N 
Sbjct: 337 SL-----SFAVHSDGTVSSWGSNVDGALGVEQRSNS 367



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 72/190 (37%), Gaps = 61/190 (32%)

Query: 216 VAAGAWHAAVVGQDGRVCTWG--------------------------------------- 236
           VAAG +H+ +V  DG V  WG                                       
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYLRFDGGVRPVPGLTDVRAVSAGNEHALALRTDGTVW 197

Query: 237 -WGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
            WG    G LG G +   S P  V  L +V A+  A   Y++  + +DG V+++G  ES 
Sbjct: 198 AWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAA--GYSSLALRKDGTVWAWGDNESG 255

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG   + +G+       LTP  V  L +V         T       H+ A+   G + A
Sbjct: 256 QLGDGTM-EGR-------LTPVQVLDLVRV---------TGLAAGRGHSLAVLADGTVRA 298

Query: 354 FGAGDKGQLG 363
           +GA   GQLG
Sbjct: 299 WGANIYGQLG 308


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 143/308 (46%), Gaps = 30/308 (9%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           Q A G   T+LI+  G+V++ G +  G+  +     +L    Q++  L      QAA G 
Sbjct: 65  QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL----QMIPGLDAFIFKQAACGA 120

Query: 111 FFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +  ++  G++  F WG+  D +LG  T         ++  L    VVQIA G  + LA
Sbjct: 121 SHSVAVNNWGQL--FCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLA 178

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           L    +   +Y+ G    G+LG G     E  P+LI    L  +    +A G +H+ VV 
Sbjct: 179 LT---NNGELYAWGSNSDGQLGLGQDVKIETRPKLITG--LATIPIAFIACGGYHSIVVS 233

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
           + G V  WG   +G LG  +   + VP +++ L + K  +VA G+  +  ++ DG V++ 
Sbjct: 234 KSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTC 293

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G    LGH A        ++N + P+ +  L  +   V QIS         HT AL  
Sbjct: 294 GAGMYGQLGHGA--------NSNEILPRQIIEL--MGSVVTQISCGKR-----HTLALVP 338

Query: 348 S-GKLYAF 354
           S GK+YA+
Sbjct: 339 SRGKVYAW 346



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 12/202 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++L    ++Q A G   T+ +++ G++YA+G +S G+   G Q  K+ T P+L+ 
Sbjct: 154 TPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLG-QDVKIETRPKLIT 212

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L  I +   A G + + V+S+ G V  F WG +   +LG +   +   P  LL TL N 
Sbjct: 213 GLATIPIAFIACGGYHSIVVSKSGAV--FGWGRNTFGQLGMNDISDKYVP-CLLKTLRNA 269

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  +A G  + + L        V++ G G+ G+LGHG+ ++E  PR I   +L+     
Sbjct: 270 KVKYVACGEEFSVFLTMDG---GVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVT 324

Query: 215 VVAAGAWHA-AVVGQDGRVCTW 235
            ++ G  H  A+V   G+V  W
Sbjct: 325 QISCGKRHTLALVPSRGKVYAW 346



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 20/202 (9%)

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWH 222
           + L L   P+   +Y  G  + G+LG G   DE    PR ++  +   ++ +  A G  H
Sbjct: 15  FHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQI--ACGETH 72

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             ++ +DG V + G    G LGH  E+     +++  L+       A G   +  V+  G
Sbjct: 73  TVLITKDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWG 130

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            ++ +G      LG        G       TP++V +L      VVQI+         HT
Sbjct: 131 QLFCWGSNADGQLG-------LGTPLTIAHTPRMVKALG--TSIVVQIACGKK-----HT 176

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
            ALT +G+LYA+G+   GQLG+
Sbjct: 177 LALTNNGELYAWGSNSDGQLGL 198



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 19/194 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+S G    G+LGH   T  K  ++I        +    A GA H+  V   G++  WG 
Sbjct: 82  VFSCGNNDSGQLGHEKPT--KRLQMIPGLDAFIFKQA--ACGASHSVAVNNWGQLFCWGS 137

Query: 238 GRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G LG G        P++V+AL     + +A G   T  ++ +G++Y++G      LG
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                 GQ  +      P+L+T L  +    +            H+  +++SG ++ +G 
Sbjct: 198 L-----GQDVKIET--RPKLITGLATIPIAFIACG-------GYHSIVVSKSGAVFGWGR 243

Query: 357 GDKGQLGIELVNNQ 370
              GQLG+  ++++
Sbjct: 244 NTFGQLGMNDISDK 257


>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
          Length = 660

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 18/311 (5%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VYA+GK+ +GE  +     +  + P+  ++L+ I++ Q +     ++ +S  G +Y    
Sbjct: 60  VYAWGKNEYGELSFSQTKQQFYSKPENPKNLEKIYIKQISTSQNHSSCVSSNGDLYVCGS 119

Query: 128 GNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
               +LG  +    ++    +L  L+ I V+Q+A G  + LAL        VY+ G  L 
Sbjct: 120 ALHGKLGLENLTMANINKFQILTALKGIKVLQVACGDYHTLALT---ENDQVYAWGGTLY 176

Query: 187 GKLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG----RYG 241
            K+G  G +    H       QL N     +  G +H+  +   G + TWG G      G
Sbjct: 177 KKVGQRGGKPGPIH-------QLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKG 229

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LG G+ +   +P+ +Q   + K I V+ G + T  + +D  +Y +G GE   LG   + 
Sbjct: 230 QLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGELGELGSGKVL 289

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
                    +L   +  +     ++  QIS         HT  L   G +Y+ G G  GQ
Sbjct: 290 YFLYLLIILILKKYITINKNNYYKKDPQISDIKC--GGHHTLILLNIGYVYSTGYGSYGQ 347

Query: 362 LGIELVNNQTE 372
           LG++  NN  E
Sbjct: 348 LGLKTTNNHCE 358



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 149/342 (43%), Gaps = 46/342 (13%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLK 99
           ++L+ I I Q +     +  +S  G +Y  G    G+   G++   +  +   Q++ +LK
Sbjct: 88  KNLEKIYIKQISTSQNHSSCVSSNGDLYVCGSALHGKL--GLENLTMANINKFQILTALK 145

Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            I V+Q A G++ T  L+   +VY  +WG    L         +P P+   L N  V  I
Sbjct: 146 GIKVLQVACGDYHTLALTENDQVY--AWG--GTLYKKVGQRGGKPGPI-HQLTNKGVTYI 200

Query: 160 AAGYCYLLALACQPSGMAVYSVGCG----LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
             G  + +A+  Q     +Y+ G G      G+LG G   D + P  I+ F+  N + + 
Sbjct: 201 DCGDFHSVAITNQGD---IYTWGGGGQFQNKGQLGLGHMKDIEIPEQIQFFK--NKKVIK 255

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-------------EECESVPKVVQALND 262
           V+ G +H   +  D ++  WG G  G LG G              ++  ++ K      D
Sbjct: 256 VSCGQFHTMALIDDNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKD 315

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            +   +  G + T ++   G VYS G G    LG         N H      QLV +L +
Sbjct: 316 PQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTT-----NNHCEF---QLVWTLTK 367

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             +++++I+      WN H+  LT++  +++ G    GQLG+
Sbjct: 368 --KKIIKIAAG----WN-HSLVLTDTNDVFSCGYNAWGQLGL 402



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 108/265 (40%), Gaps = 37/265 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK--DSFGEAEYGVQGTKLVTSPQLV 95
           P++  + +G+  I    G   ++ I++ G +Y +G       + + G+   K +  P+ +
Sbjct: 188 PIHQLTNKGVTYIDC--GDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQI 245

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH------------------- 136
           +  KN  V++ + G F T  L  + ++Y +  G    LG                     
Sbjct: 246 QFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYIT 305

Query: 137 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
             + N  +  P +  ++         G+  L+ L        VYS G G  G+LG   +T
Sbjct: 306 INKNNYYKKDPQISDIK-------CGGHHTLILLNIG----YVYSTGYGSYGQLG--LKT 352

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
              H      + L   + + +AAG  H+ V+     V + G+  +G LG G+EE  ++  
Sbjct: 353 TNNHCEFQLVWTLTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFT 412

Query: 256 VVQALNDVKAIHVATGDYTTFVVSE 280
            + AL     + ++ G   ++ + E
Sbjct: 413 HISALAGKNVVEISAGGSHSWAILE 437


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L ++ G+VY +G +++ +   G      V   Q+  
Sbjct: 65  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPC-QVST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G+  + VL+ +G VYT+ + N  ++G  +  N   P  +   L+N  V
Sbjct: 124 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q   V
Sbjct: 184 VNIACG--QMCSMAVVENG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQR--V 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D V  I      +T+
Sbjct: 239 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTS 298

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S +  H
Sbjct: 299 AAKTQSGQVYMWGQCRGQSVTFPH 322



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 96  VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 154

Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 259

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V +D
Sbjct: 260 NSYGQLG---TGNKSNQSYPTTVVVD 282



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G +  +   +  +V+
Sbjct: 223 TPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD 282

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               +  + A      +A  ++ G+VY   WG
Sbjct: 283 K-DRVIEIAACHSAHTSAAKTQSGQVYM--WG 311



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E+ +L+  Q  V  +         ++  V   G    GCLG G+ +    P+ + +L   
Sbjct: 16  EEIKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 74

Query: 264 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 321
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +   +  Q+ T+L 
Sbjct: 75  KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 125

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 126 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 168


>gi|301101976|ref|XP_002900076.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262102651|gb|EEY60703.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 675

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 49/326 (15%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           D G +Y FGK  + +  Y +    +  +P+LVE   N  +VQ +   + T  L+  G  +
Sbjct: 144 DGGLIYTFGKRDY-QLGYHLPNADVQITPRLVELPTNSPIVQLSASKYHTIALNAAGECF 202

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
            + +G   RLG  +E + VEP   L +LE  P+ ++ AG  + +AL+       V+S G 
Sbjct: 203 VWGFGKGGRLGTGSEFDCVEP-TRLESLETTPMKKVVAGENHTMALS---RTGQVFSWGS 258

Query: 184 GLGGKLGHGSRTDEKHPRL----IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
              G+LGH  ++     RL    I+ F+  +L   + A+G   AA+   DG V TWG  R
Sbjct: 259 NSFGQLGHRGKSSSSQSRLTPKRIDAFR-FHLVADIAASGCHSAAIDADDGAVYTWGSNR 317

Query: 240 YGCLGH----GNEECESVPKVVQALND-------------VKAIHVATGDYTTFVV---- 278
            G LG     G ++ ++ P+ V AL               V+A  +A  D+ T VV    
Sbjct: 318 RGQLGRKEGCGTDQADATPQCVDALRPRHPMCVVYGAYDFVRAEKLALSDWHTCVVLRCA 377

Query: 279 ---SEDGDVYSFGCGE------SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
                 G ++ FG G       +   G +A     G     V+    + + KQ    +V+
Sbjct: 378 HNGRSLGQIWQFGYGSYRPSRVNLPSGRSASTSVAG----AVMCDTWIPTCKQRAVDIVE 433

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFG 355
           +S   +     H+ AL+ SG ++ +G
Sbjct: 434 VSCAQN-----HSIALSASGSVFTWG 454



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 16/166 (9%)

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           PRL+E   L    P+V ++A  +H   +   G    WG+G+ G LG G+E     P  ++
Sbjct: 171 PRLVE---LPTNSPIVQLSASKYHTIALNAAGECFVWGFGKGGRLGTGSEFDCVEPTRLE 227

Query: 259 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           +L       V  G+  T  +S  G V+S+G      LGH     G+ +   + LTP+ + 
Sbjct: 228 SLETTPMKKVVAGENHTMALSRTGQVFSWGSNSFGQLGHR----GKSSSSQSRLTPKRID 283

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFGAGDKGQLG 363
           + +     V  I+ +       H+ A+  + G +Y +G+  +GQLG
Sbjct: 284 AFR--FHLVADIAAS-----GCHSAAIDADDGAVYTWGSNRRGQLG 322



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 143/355 (40%), Gaps = 45/355 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY--GVQGTKLVTSPQLV 95
           P    SL+   + +  AG   TM +S  GQV+++G +SFG+  +      ++   +P+ +
Sbjct: 223 PTRLESLETTPMKKVVAGENHTMALSRTGQVFSWGSNSFGQLGHRGKSSSSQSRLTPKRI 282

Query: 96  ESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWGNDAR--LGHH----TEPNDVEPHPLL 148
           ++ +   V   AA G    A+ + +G VYT  WG++ R  LG      T+  D  P  + 
Sbjct: 283 DAFRFHLVADIAASGCHSAAIDADDGAVYT--WGSNRRGQLGRKEGCGTDQADATPQCVD 340

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
                 P+  +   Y ++ A       +A+      +  +  H  R+  +    I QF  
Sbjct: 341 ALRPRHPMCVVYGAYDFVRA-----EKLALSDWHTCVVLRCAHNGRSLGQ----IWQFGY 391

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            + +P  V   +  +A     G V    W               +P   Q   D+  + V
Sbjct: 392 GSYRPSRVNLPSGRSASTSVAGAVMCDTW---------------IPTCKQRAVDI--VEV 434

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           +     +  +S  G V+++G    A L H   +  Q +R+A++   ++         + V
Sbjct: 435 SCAQNHSIALSASGSVFTWGHNVPA-LSHQPSSSSQ-DRNASLFGDKVPPVPSPSAPQKV 492

Query: 329 QI----SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +     + +      H   +T+ G L  +G G +G LG    N  T + +P+RV
Sbjct: 493 LLGTYGPVASVCASQDHCAVVTQQGDLVTWGCGQQGVLGHGRGN--TWQPSPKRV 545



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYT 274
           V A   H AVV Q G + TWG G+ G LGHG     +  PK V  +   KA+ VA G   
Sbjct: 503 VCASQDHCAVVTQQGDLVTWGCGQQGVLGHGRGNTWQPSPKRVAGVK--KAVAVAAGHQH 560

Query: 275 TFVV 278
           T V+
Sbjct: 561 TAVL 564


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 147/343 (42%), Gaps = 39/343 (11%)

Query: 25  GKRNLLGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           G R  LG        TP+  + L    +I    G   TM +   G V+ +G +  G+   
Sbjct: 60  GDRGQLGNGTWSARTTPVMAKGLN--HVIDVHTGVRSTMALRSDGTVWTWGSNENGQ--L 115

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
           G+     +  P  V  L  I  V   +G + +  LS +G V+T+   ++  LG+ T    
Sbjct: 116 GIGTVTDMNVPGQVSGLSGIKAVSGGLG-YHSMALSEDGSVWTWGKNDNGELGNGTTLQQ 174

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
             P  + G  +   V  IAAG  + LAL    +   V++ G    G+LG G+ TD   P 
Sbjct: 175 NTPVQVAGLND---VTAIAAGGYFSLALKSDGT---VWAWGVNGDGELGDGTTTDRYVP- 227

Query: 202 LIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
                Q+  L  V+ +AAG  H+  V QDG V  WG   YG LG G     + P  ++ L
Sbjct: 228 ----VQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNL 283

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
             + A  VA G Y +  +   G+V+S+G      LG  +        +A+ L P  V+ +
Sbjct: 284 QHIVA--VAGGGYHSLALDRTGNVWSWGDNSQRQLGVGS--------NASSLIPVPVSGI 333

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + V E               H+ A+ + G ++ +G    GQLG
Sbjct: 334 EHVREIAAG---------GFHSVAMKKDGTVWGWGFNGGGQLG 367



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 32/266 (12%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G + TA L   G VY++ +G+  +LG+ T      P    G      V+ +  G    +A
Sbjct: 41  GYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNH---VIDVHTGVRSTMA 97

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--AWHAAVV 226
           L    +   V++ G    G+LG G+ TD   P      Q+  L  +   +G   +H+  +
Sbjct: 98  LRSDGT---VWTWGSNENGQLGIGTVTDMNVPG-----QVSGLSGIKAVSGGLGYHSMAL 149

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
            +DG V TWG    G LG+G    ++ P  V  LNDV AI  A G Y +  +  DG V++
Sbjct: 150 SEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAI--AAGGYFSLALKSDGTVWA 207

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G      LG     D    R+  V    L          V+ I+   S     H+ A+T
Sbjct: 208 WGVNGDGELGDGTTTD----RYVPVQVAGLTD--------VMAIAAGGS-----HSLAVT 250

Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
           + G ++A+G    G LG     N+T 
Sbjct: 251 QDGTVWAWGKNTYGTLGDGTRTNRTR 276



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 112/290 (38%), Gaps = 57/290 (19%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L GI+ +    G   +M +S+ G V+ +GK+  GE   G   T    +P  V  
Sbjct: 126 PGQVSGLSGIKAVSGGLGY-HSMALSEDGSVWTWGKNDNGELGNGT--TLQQNTPVQVAG 182

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L ++  + A  G +F+  L  +G V+ +    D  LG  T  +   P  + G  +   V+
Sbjct: 183 LNDVTAIAA--GGYFSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTD---VM 237

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL-------- 209
            IAAG  + LA+    +   V++ G    G LG G+RT+   P  I+  Q +        
Sbjct: 238 AIAAGGSHSLAVTQDGT---VWAWGKNTYGTLGDGTRTNRTRPVQIKNLQHIVAVAGGGY 294

Query: 210 -----------------------------NLQPVVV---------AAGAWHAAVVGQDGR 231
                                        +L PV V         AAG +H+  + +DG 
Sbjct: 295 HSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIEHVREIAAGGFHSVAMKKDGT 354

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           V  WG+   G LG G       P + +A+ D       +G      ++ D
Sbjct: 355 VWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTTPPDPGSGTLNPDSITTD 404



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           + AG +H A +   G V +WG+G  G LG+G     + P + + LN V  +H  TG  +T
Sbjct: 38  LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVH--TGVRST 95

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G  E+  LG   + D       NV  P  V+ L  +  + V   L   
Sbjct: 96  MALRSDGTVWTWGSNENGQLGIGTVTD------MNV--PGQVSGLSGI--KAVSGGL--- 142

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                H+ AL+E G ++ +G  D G+LG
Sbjct: 143 ---GYHSMALSEDGSVWTWGKNDNGELG 167


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 132/284 (46%), Gaps = 32/284 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH-PLLGT 150
           P+ +ES   + V   A G    A+++R+G V+T+   +  RLGH    + ++P   + G 
Sbjct: 269 PRPLESNVVLDVHHIACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGP 328

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           LE +   Q+A+  C     A   S   +++ G G  G LGHG+R +  +PR +E   L  
Sbjct: 329 LEGL---QVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVES--LAG 383

Query: 211 LQPVVVAAGAWHAAVVGQ-----------DGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           L+ + VA G WH A V +            G++ TWG G    LGHG++E    P  V A
Sbjct: 384 LRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPA 443

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L D     +A G   T  ++  G V++ G      LG N  ADG+         P LV  
Sbjct: 444 LIDYNFHKIACGHSLTVGLTTAGHVFTMGSTVYGQLG-NPCADGK--------VPCLVED 494

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            K   E V +I+     Y   H  ALT   ++Y +G G  G+LG
Sbjct: 495 -KLYGESVEEIAC--GAY---HVAALTSRNEVYTWGKGANGRLG 532



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 19/239 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G+++     G   T L++  GQ++ FG  +FG   +G +    V  P+ VESL  +  
Sbjct: 329 LEGLQVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNREN--VAYPREVESLAGLRT 386

Query: 104 VQAAIGNFFTAVL-----------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           +  A G + TA +           +  G+++T+  G+  RLGH  +   +EP   +  L 
Sbjct: 387 IAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEP-TCVPALI 445

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
           +    +IA G+   + L    +   V+++G  + G+LG+    D K P L+E  +L    
Sbjct: 446 DYNFHKIACGHSLTVGLT---TAGHVFTMGSTVYGQLGNPC-ADGKVPCLVED-KLYGES 500

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
              +A GA+H A +     V TWG G  G LGHG+ E    P +V+AL D    ++A G
Sbjct: 501 VEEIACGAYHVAALTSRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACG 559



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 30/184 (16%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEEC 250
           +R D   PR +E   +L++  +  A G  HAA+V + G V TWG    G LGH  G +  
Sbjct: 262 TRADVLLPRPLESNVVLDVHHI--ACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVI 319

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           +   ++   L  ++   V  G + T +V+  G +++FG G    LGH       GNR  N
Sbjct: 320 QPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGH-------GNRE-N 371

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-----------SGKLYAFGAGDK 359
           V  P+ V SL  +    V   +     W  HT A+ E           SGKL+ +G GDK
Sbjct: 372 VAYPREVESLAGLRTIAVACGV-----W--HTAAVVEVIVTQSSSSASSGKLFTWGDGDK 424

Query: 360 GQLG 363
            +LG
Sbjct: 425 NRLG 428


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 173/374 (46%), Gaps = 53/374 (14%)

Query: 41  CRSLQG--IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
            + LQG   ++I + AG+  T+ I D G V+A+G + FG+   G      +  P  V+ L
Sbjct: 34  SKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI--PVRVKGL 91

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
           K++  V A  G F +  L ++G V+ +   N  +       +   P  +   L+NI  V 
Sbjct: 92  KDVVAVSA--GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKV-KELKNI--VA 146

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           IAAG+ + LA+    S   V++ G    G+LG GS      P  ++  +      V V+A
Sbjct: 147 IAAGWDFSLAVGSDGS---VWAWGINNHGELGIGSLKPSAVPVKVKGLK----DVVAVSA 199

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAIHVATGDYTTF 276
           G +H+  + +DG V +WG+   G LG+   E    SVP  V+ L+DV  I ++ G + + 
Sbjct: 200 GLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDV--IAISAGGFHSI 257

Query: 277 VVSEDGDVYSFGCGESASLG--------------HNAIADGQGNRHANVLTPQ------- 315
            +++DG V+ +G G     G              +  +A   G RH+  L          
Sbjct: 258 ALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG 317

Query: 316 ------LVTSLKQVNERVVQIS-LTNSIYWNA---HTFALTESGKLYAFGAGDKGQLGIE 365
                 L +++ + +  +VQ+  L N +   A   H+ ALT++G ++A+G    GQLG E
Sbjct: 318 HNSYGVLGSNVGEHSFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRE 377

Query: 366 LVNNQTERGNPERV 379
             NN      P +V
Sbjct: 378 --NNSFSLNLPYKV 389



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 36/328 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+  + L+   I+  AAG   ++ +   G V+A+G ++ GE   G+   K    P  V+
Sbjct: 134 TPVKVKELK--NIVAIAAGWDFSLAVGSDGSVWAWGINNHGE--LGIGSLKPSAVPVKVK 189

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-TEPNDVEPHPLLGTLENIP 155
            LK++  V A +  + +  L R+G V+++ +  D  LG+  TE   V     +  L +  
Sbjct: 190 GLKDVVAVSAGL--YHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-- 245

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V+ I+AG  + +AL       AV+  G G+  K G   + D  +  +  + + LN + V 
Sbjct: 246 VIAISAGGFHSIALNKDG---AVWIWGGGIIEKNG---KIDNSYIPV--RIRWLN-KVVA 296

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +AAG  H+  +  DG V  WG   YG LG    E   +   V+ L +V A  VA G   +
Sbjct: 297 IAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKNVVA--VAAGRLHS 354

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             ++++G ++++G        +NA   GQ  R  N  +  L   +K + + VV I+   S
Sbjct: 355 VALTKNGTIWAWG--------NNAF--GQLGRENNSFSLNLPYKVKWL-DNVVAIATGGS 403

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
                HT A+   G ++++GA +KGQLG
Sbjct: 404 -----HTLAIKRDGTVWSWGANNKGQLG 426



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 145/306 (47%), Gaps = 40/306 (13%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
           AG+  ++ +   G V+ +G   F E+ +  + TK + SP  ++  K   + + A G  + 
Sbjct: 450 AGSQHSLAVDKDGTVWVWG---FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYI 506

Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAGYCYLLALACQ 172
            VL ++G ++    GND      T+ + V     L  L+NI  V+ IAAGY + LA+   
Sbjct: 507 LVLRKDGNIWGC--GNDFYFRKFTDSS-VSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTD 563

Query: 173 PSGMAVYSVG-CGLGGKLGHGSRTDEKHPRLIEQ-FQLLNLQPVV-VAAGAWHAAVVGQD 229
            +   V+S G   L  K        +K+    E+  ++  L  VV VAAG +H+  + +D
Sbjct: 564 GT---VWSWGDTNLDNK--------KKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKD 612

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V +WG+  YG LG+G  E   VP  V+ LN+V AI  A GDY +  + +DG V+ +G 
Sbjct: 613 GTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAI--AAGDYHSMALKKDGTVWVWGS 670

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
                LG   I             P  V  L    + VV I+  ++     H+ AL + G
Sbjct: 671 NIRGQLGRRNIEFST--------VPLKVEKL----DNVVAIAAGDT-----HSVALKKDG 713

Query: 350 KLYAFG 355
            ++ +G
Sbjct: 714 TVWVWG 719



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S  + K+    ++ Q  N + +   AG+ H   +  DG V  WG+  +G LG+G  +   
Sbjct: 24  SNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSC 83

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           +P  V+ L DV A  V+ G + +  + +DG V+ +        GH      + + + +  
Sbjct: 84  IPVRVKGLKDVVA--VSAGTFHSLALKKDGSVWIW--------GHTNYGQRKSDVYRDFT 133

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           TP  V  LK     +V I+      W+  + A+   G ++A+G  + G+LGI
Sbjct: 134 TPVKVKELKN----IVAIAAG----WD-FSLAVGSDGSVWAWGINNHGELGI 176



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL----GTLENIPVVQ 158
           VV  A G   +  L  +G V+   WG+++   +    ++V  H  L      L+N  VV 
Sbjct: 294 VVAIAAGYRHSIALKDDGTVWV--WGHNS---YGVLGSNVGEHSFLLVQVKGLKN--VVA 346

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +AAG  + +AL    +   +++ G    G+LG     +     L  + + L+   V +A 
Sbjct: 347 VAAGRLHSVALTKNGT---IWAWGNNAFGQLGR--ENNSFSLNLPYKVKWLD-NVVAIAT 400

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G  H   + +DG V +WG    G LG+G  +   +P  V+ LN+  A+ V  G   +  V
Sbjct: 401 GGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNN--AVLVEAGSQHSLAV 458

Query: 279 SEDGDVYSFGCGES 292
            +DG V+ +G  ES
Sbjct: 459 DKDGTVWVWGFIES 472


>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
 gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
          Length = 440

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 58/379 (15%)

Query: 28  NLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--------AFGKDSFGEA 79
           + L R+    P+    L+G+ I+Q  +G   T+ +S  G+VY        A G+++  E 
Sbjct: 63  DTLERKKPAVPI---DLEGVPIVQVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEG 119

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
           E   Q       P +V    ++ +V  + G+  TA LS +G VY +    DA      +P
Sbjct: 120 EEEFQ-------PGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQP 172

Query: 140 NDVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-------- 190
           + V+  P ++ T E+  +++IA+G  +  AL    +   ++++GC   G+LG        
Sbjct: 173 DGVKKKPAVILTSESDRIIKIASGNDHTAALTTSGN---LFTLGCAEQGQLGRVKECFSA 229

Query: 191 HGSRTDEKH---PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHG 246
            G R    +   P L+   + L  + V    G++   VV + G  V  WG   YG LG G
Sbjct: 230 RGGRRGLAYILEPALVRSKKGLKFKDVF--CGSFATFVVAKTGSDVYAWGLNNYGQLGTG 287

Query: 247 NEECESVPKVVQALNDV------KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
           + +    P  V++L+ +      K I +A G + T V   +G VY+ G  +   LG   +
Sbjct: 288 DVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVYALGRADYGRLG---L 344

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
            DG          P  +TSL   NE + +++    +     +FA+++ G+LY++G G   
Sbjct: 345 GDGA----KETALPAHITSLD--NEVIEKVACGECV-----SFAVSDKGELYSWGMGSCL 393

Query: 361 QLGIELVNNQTERGNPERV 379
           QLG    N++ +   P +V
Sbjct: 394 QLGNG--NDEDDVTTPAKV 410



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 28/303 (9%)

Query: 47  IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           + I+  +AG   T  +SD G VYA+G       + G+Q   +   P ++ + ++  +++ 
Sbjct: 134 VNIVMVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKI 193

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-----------VEPHPLLGTLENIP 155
           A GN  TA L+  G ++T       +LG   E              +EP  L+ + + + 
Sbjct: 194 ASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEP-ALVRSKKGLK 252

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL---- 211
              +  G      +A   +G  VY+ G    G+LG G       P  ++    LN     
Sbjct: 253 FKDVFCGSFATFVVA--KTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKD 310

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVAT 270
           + + +A G  H  V   +G+V   G   YG LG G+   E+ +P  + +L++     VA 
Sbjct: 311 KHITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVAC 370

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVV 328
           G+  +F VS+ G++YS+G G    LG+       GN   +V TP  V   +L     RV+
Sbjct: 371 GECVSFAVSDKGELYSWGMGSCLQLGN-------GNDEDDVTTPAKVQGKNLNSETHRVL 423

Query: 329 QIS 331
            +S
Sbjct: 424 GVS 426



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 37/320 (11%)

Query: 64  DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           ++GQ    G+   G+   G   T     P +   L+ + +VQ   G   T  LS++G+VY
Sbjct: 43  ESGQALTLGQGDVGQLGLGPD-TLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101

Query: 124 TFSWGNDARLGHHTEPN-DVEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           T+   +D  LG  T    + E  P ++   +++ +V ++AG  +  AL+ Q +   VY+ 
Sbjct: 102 TWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGT---VYAW 158

Query: 182 GC--GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           G      G++G      +K P +I   +   +  + +A+G  H A +   G + T G   
Sbjct: 159 GTYRDASGQIGLQPDGVKKKPAVILTSESDRI--IKIASGNDHTAALTTSGNLFTLGCAE 216

Query: 240 YGCLGHGNEECESV------------PKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYS 286
            G LG   +EC S             P +V++   +K   V  G + TFVV++ G DVY+
Sbjct: 217 QGQLGR-VKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYA 275

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN--ERVVQISLTNSIYWNAHTFA 344
           +G      LG   +             P  V SL Q+N  E+   I++ N  +   HT  
Sbjct: 276 WGLNNYGQLGTGDVQTWH--------FPVKVKSLSQLNKSEKDKHITIANGQH---HTIV 324

Query: 345 LTESGKLYAFGAGDKGQLGI 364
              +GK+YA G  D G+LG+
Sbjct: 325 CDPNGKVYALGRADYGRLGL 344



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           + G+  T G G  G LG G +  E   P V   L  V  + V +G   T  +S+DG VY+
Sbjct: 43  ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 102

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +GC +  +LG    ++G+         P +V+    VN  +V +S  +S     HT AL+
Sbjct: 103 WGCNDDGALGRETTSEGE-----EEFQPGVVSMPDDVN--IVMVSAGDS-----HTAALS 150

Query: 347 ESGKLYAFGA--GDKGQLGIE 365
           + G +YA+G      GQ+G++
Sbjct: 151 DQGTVYAWGTYRDASGQIGLQ 171



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 29/270 (10%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG----------KDSFGEAEYGV 83
           V   P    + +  RII+ A+G   T  ++ +G ++  G          K+ F  A  G 
Sbjct: 175 VKKKPAVILTSESDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECF-SARGGR 233

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTE---- 138
           +G   +  P LV S K +       G+F T V+++ G  VY +   N  +LG        
Sbjct: 234 RGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWH 293

Query: 139 -PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
            P  V+    L   E    + IA G  +   + C P+G  VY++G    G+LG G     
Sbjct: 294 FPVKVKSLSQLNKSEKDKHITIANGQHH--TIVCDPNG-KVYALGRADYGRLGLGDGA-- 348

Query: 198 KHPRLIEQFQLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPK 255
           K   L      L+ + +  VA G   +  V   G + +WG G    LG+GN+E + + P 
Sbjct: 349 KETALPAHITSLDNEVIEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPA 408

Query: 256 VVQALNDVKAIH-----VATGDYTTFVVSE 280
            VQ  N     H      A G +T  + +E
Sbjct: 409 KVQGKNLNSETHRVLGVSAGGQHTVILAAE 438


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L ++ G+VY +G +++ +   G      V   Q+  
Sbjct: 70  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPC-QVST 128

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G+  + VL+ +G VYT+ + N  ++G  +  N   P  +   L+N  V
Sbjct: 129 NLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV 188

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q   V
Sbjct: 189 VNIACG--QMCSMAVVENG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQR--V 243

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D V  I      +T+
Sbjct: 244 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTS 303

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 304 AAKTQSGQVYMWGQCRGQSVILPH 327



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY+ G     +LG+G+      P  +    L+N + + VA G+ H+ V+  DG V TWG+
Sbjct: 101 VYTWGHNAYSQLGNGTTNHGFVPCQVST-NLVNKKVIEVACGSHHSMVLTSDGEVYTWGY 159

Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P+ V   L +   +++A G   +  V E+G+VY +G   +  LG
Sbjct: 160 NNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 219

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 220 LGS--------SGNQPTPCRIAALQGI--RVQRVACGY-----AHTLVLTDEGQIYAWGA 264

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V +D
Sbjct: 265 NSYGQLG---TGNKSNQSYPTTVVVD 287



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G +  +   +  +V+
Sbjct: 228 TPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD 287

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               +  + A      +A  ++ G+VY   WG
Sbjct: 288 K-DRVIEIAACHSAHTSAAKTQSGQVYM--WG 316



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E+ +L+  Q  V  +         ++  V   G    GCLG G+ +    P+ + +L   
Sbjct: 21  EELKLIR-QACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGK 79

Query: 264 KAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLK 321
           K   ++ G     V+ +E+G+VY++        GHNA +  G G  +   +  Q+ T+L 
Sbjct: 80  KIACLSYGSGPHVVLATEEGEVYTW--------GHNAYSQLGNGTTNHGFVPCQVSTNL- 130

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            VN++V++++  +      H+  LT  G++Y +G  + GQ+G     NQ
Sbjct: 131 -VNKKVIEVACGSH-----HSMVLTSDGEVYTWGYNNSGQVGSGSTANQ 173


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 164

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 165 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTV 224

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q V  
Sbjct: 225 VNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRV-- 279

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 280 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSA--- 336

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S +L H        +  A   TP +   L  V
Sbjct: 337 HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFATPAVTWRLLSV 389



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 137 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 195

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 255

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                 G G    N  TP  + +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 256 L-----GSG---GNQPTPCRIAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 300

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 301 NSYGQLGTGNKSNQS 315



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 264 TPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVE 323

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               I  + A      +A  ++ G VY   WG
Sbjct: 324 K-DRIIEIAACHSAHTSAAKTQGGHVYM--WG 352


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 18/344 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKN 100
           SLQ   IIQ  AG   T+ ++  G+V   G +  G+   G   + + L   P++ ++   
Sbjct: 462 SLQQKEIIQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDN--A 519

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           I  V A  G   T +++ +GR  T  +    +LGH    ++  P  ++ +LEN  V  ++
Sbjct: 520 ISQVHAYNGCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPK-IVRSLENRIVRLVS 578

Query: 161 AGYCYLLALACQPSGMA---VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
             Y Y   +AC+  G     +Y+ G    G+LGH    D K P+ +E   + +   V VA
Sbjct: 579 CSY-YHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEA--MGDQHVVSVA 635

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTF 276
            G +H  VV   G+   +G   YG LG  + E + VP  V+A L   + + +  G Y T 
Sbjct: 636 CGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTI 695

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+     +++FG  +   LG   +     +  AN+   Q   S  ++ E +    +    
Sbjct: 696 VLCSGAHLFAFGRNDYGQLG---LGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFA 752

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
               HT A++++G +Y FG  + GQLG     +  ER  P  +D
Sbjct: 753 CGCYHTVAVSDNGVMYVFGRNNHGQLG---TGDTNERVYPFPID 793



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 25/229 (10%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +L+   ++QI AG  + +AL        V + G    G+ G G      H   + +  
Sbjct: 460 IESLQQKEIIQIGAGNEHTIALTVDGK---VLTCGYNDNGQCGQGGTARVSHLCEMPKMG 516

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH 267
              +  V    G  H  +V  DGR  T G+   G LGHGN   ESVPK+V++L + + + 
Sbjct: 517 DNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLEN-RIVR 575

Query: 268 VATGDY--TTFVVSEDGD----VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           + +  Y  T     EDG     +Y+FG  +   LGHN   D +  +H   +  Q V    
Sbjct: 576 LVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHV---- 631

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                   +S+    Y   HT  +T +GK +AFG  D GQLGI+ + NQ
Sbjct: 632 --------VSVACGQY---HTMVVTATGKAFAFGKNDYGQLGIDSMENQ 669



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 141/311 (45%), Gaps = 41/311 (13%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           +V++ G++S+GE  +G   ++   S + +ESL+   ++Q   GN  T  L+ +G+V T  
Sbjct: 434 EVWSCGQNSYGELGHGDTASR--KSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491

Query: 127 W--------GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
           +        G  AR+ H  E       P +G   +  + Q+ A       +     G A 
Sbjct: 492 YNDNGQCGQGGTARVSHLCE------MPKMG---DNAISQVHAYNGCEHTILVTMDGRAA 542

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGR----VC 233
            + G    G+LGHG+   E  P+++   +  N    +V+   +H  +   +DG     + 
Sbjct: 543 -TCGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLY 599

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
           T+G   YG LGH +     VP+ V+A+ D   + VA G Y T VV+  G  ++FG  +  
Sbjct: 600 TFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
            LG +++         N L P  V +  + +E    + +    Y   HT  L     L+A
Sbjct: 660 QLGIDSM--------ENQLVPVQVRAGLEKHE---CLEIRCGYY---HTIVLCSGAHLFA 705

Query: 354 FGAGDKGQLGI 364
           FG  D GQLG+
Sbjct: 706 FGRNDYGQLGL 716



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 20/213 (9%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  + + R+V   P +  ++    ++  A G   TM+++  G+ +AFGK+ +G+      
Sbjct: 610 GHNDSIDRKV---PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSM 666

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG---------- 134
             +LV   Q+   L+    ++   G + T VL     ++ F   +  +LG          
Sbjct: 667 ENQLVPV-QVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTA 725

Query: 135 -HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
               +        L+  LE   +V+ A G CY   +A   +G+ +Y  G    G+LG G 
Sbjct: 726 NLQLQQQRFSYARLIEELEGKDIVRFACG-CY-HTVAVSDNGV-MYVFGRNNHGQLGTGD 782

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
             +  +P  I+ F  +  +  +VAAG +H  V+
Sbjct: 783 TNERVYPFPIDDF--VGKRVALVAAGFYHTVVL 813



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 61/203 (30%)

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           D  V + G   YG LGHG+       + +++L   + I +  G+  T  ++ DG V + G
Sbjct: 432 DREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCG 491

Query: 289 ------CG-----------ESASLGHNAIAD----------------------------- 302
                 CG           E   +G NAI+                              
Sbjct: 492 YNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQ 551

Query: 303 -GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK----LYAFGAG 357
            G GN  A+   P++V SL+    R+V  S  +++       A  E G     LY FG  
Sbjct: 552 LGHGNT-ASESVPKIVRSLENRIVRLVSCSYYHTV------MACEEDGSGQQYLYTFGRN 604

Query: 358 DKGQLGIELVNNQTERGNPERVD 380
           D GQLG    N+  +R  P+ V+
Sbjct: 605 DYGQLG---HNDSIDRKVPQHVE 624


>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 33/263 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN----- 100
           GIRI   AAG   T+ +SD G V+A+G    G+   G +  ++V++P LV  + +     
Sbjct: 219 GIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSR-IRMVSTPHLVPCIDSSYYSK 277

Query: 101 ----------------------IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 138
                                  ++ + A G   +AV++  G + TF WG   + G    
Sbjct: 278 DRSATLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGIT 337

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
            +++ P   + ++  I + ++AAG   L    C  +   VY+ G    G+LG G+   E 
Sbjct: 338 DDELSPT-CVSSILGIHIERVAAG---LWHTVCTSADGDVYAFGENQFGQLGTGADQAET 393

Query: 199 HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            PRL++   L NL+   ++ GA H A+V + G+V  WGW +YG LG G+    ++P  V 
Sbjct: 394 LPRLLDSPSLDNLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEV- 452

Query: 259 ALNDVKAIHVATGDYTTFVVSED 281
            +      +VA G + T +++E 
Sbjct: 453 IIEGCVPKNVACGWWHTLLLAES 475



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 149/372 (40%), Gaps = 57/372 (15%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDS-------FGEAEYGVQGTKLVTSPQLVESLKNI 101
           I++AAAG    + +++ G VY +G          FGE   GV   K V       S + +
Sbjct: 103 IVKAAAGWAHCVAVTEHGAVYTWGWKECIPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQV 162

Query: 102 FVVQAAIGNFFTAVLSREGRVYT----FSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPV 156
                   +      S  G   T     S          +  + +   P L TL   I +
Sbjct: 163 SPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRI 222

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLI------------ 203
             +AAG  + LAL+   +G+ V++ G G  G+LG GSR      P L+            
Sbjct: 223 ASVAAGGRHTLALS--DTGL-VWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYSKDR 279

Query: 204 -------------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
                        + F++       +A G  H+AV+   G + T+GWG YG  G G  + 
Sbjct: 280 SATLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDD 339

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           E  P  V ++  +    VA G + T   S DGDVY+FG  +   L       G G   A 
Sbjct: 340 ELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQL-------GTGADQAE 392

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            L P+L+ S    N R   IS         HT  +TE GK++ +G    GQLG+    + 
Sbjct: 393 TL-PRLLDSPSLDNLRAKNISCGAR-----HTALVTEGGKVFCWGWNKYGQLGL---GDV 443

Query: 371 TERGNPERVDID 382
            +R  P  V I+
Sbjct: 444 IDRNIPSEVIIE 455



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    S+ GI I + AAG   T+  S  G VYAFG++ FG  + G    +  T P+L++
Sbjct: 342 SPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFG--QLGTGADQAETLPRLLD 399

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
             SL N+     + G   TA+++  G+V+ + W    +LG     +   P  ++  +E  
Sbjct: 400 SPSLDNLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVI--IEGC 457

Query: 155 PVVQIAAGYCYLLALACQPS 174
               +A G+ + L LA  P+
Sbjct: 458 VPKNVACGWWHTLLLAESPT 477


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
           P+LVE L  + V   A G+  +A ++  G V T+  G   RLGH    + + P  L+  L
Sbjct: 10  PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEAL 68

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                + IA G      L C      V+S G G  GKLG G     K P  IE   L  L
Sbjct: 69  LGYRAIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGL 125

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             V V  G+  +  + + G V TWG G +  LGHG+ +    PK V AL   K I +ATG
Sbjct: 126 GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATG 185

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
                  S+ G+VY++G  +   LG   +   Q         P+LVT+L+   + +V+++
Sbjct: 186 SLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQW--------PRLVTALQ--GKHIVKVT 235

Query: 332 LTNSIYWNAHTFALTES 348
                  +AHT AL+ S
Sbjct: 236 CG-----SAHTLALSTS 247



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 22/219 (10%)

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+  L  + V  IA G  +  A+    SG  V + G G  G+LGHG   D+  P+L+E  
Sbjct: 12  LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE-- 66

Query: 207 QLLNLQPVVVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            LL  + + +A G+  A    +  D  V +WG G YG LG G  +   +P  +++L  + 
Sbjct: 67  ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 126

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
            + V  G   +  +++ G VY++G G+   LGH ++         +V  P+ V +L+   
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--G 176

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           ++++ I+ T S+    H  A ++SG++Y +G  D+GQLG
Sbjct: 177 KKIISIA-TGSL----HCVACSDSGEVYTWGDNDEGQLG 210



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 13/119 (10%)

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           HGN      PK+V+ LN +    +A G   +  ++  G V ++G G    LGH    D  
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ- 59

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  L P+LV +L  +  R + I+  +    +A T  +T+   ++++G GD G+LG
Sbjct: 60  -------LRPKLVEAL--LGYRAIDIACGSG---DAQTLCITDDDNVWSWGDGDYGKLG 106



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G+ +++   G+  ++ ++ +G VY +GK  F    +G      V  P+ V +
Sbjct: 116 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG--SVDHVRRPKKVAA 173

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   ++  A G+      S  G VYT+   ++ +LG  T      P  L+  L+   +V
Sbjct: 174 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPR-LVTALQGKHIV 232

Query: 158 QIAAGYCYLLALA 170
           ++  G  + LAL+
Sbjct: 233 KVTCGSAHTLALS 245


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 40/310 (12%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           + YAFG +S  +   G     L  +P  V  + NI  + A  G + T ++   G +    
Sbjct: 69  EAYAFGSNSSHQLAMGSTEKLLKATP--VPHMNNIQSIIA--GQYCTFMVLHNGSMKCCG 124

Query: 127 WGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
            G+  RLG       T   D++  P    ++++   + + G+    +LA   +G  VYS 
Sbjct: 125 KGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGSDGH----SLAVDKNG-KVYSW 179

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G G  GKLGHG+ T +K P+LI    L N     V+ G  H+A V  D  + TWG G +G
Sbjct: 180 GEGEYGKLGHGNNTTQKTPKLIAG--LSNKVIRSVSCGNRHSAAVTIDNELWTWGEGEHG 237

Query: 242 CLGHGNE--------ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 293
            LGHG+         + +  PKV++AL       V+  +  +  +++ G +YSFG G   
Sbjct: 238 RLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTKTGKLYSFGKGSGT 297

Query: 294 SLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYA 353
                    G G    +  TPQL+ SL  V    + I +T     + H  ALT+ G +Y 
Sbjct: 298 ---------GLGTPDTSYSTPQLIQSLADV----IIIDVTTG---DGHCLALTQRGDVYG 341

Query: 354 FGAGDKGQLG 363
           +G    GQ G
Sbjct: 342 WGTNSMGQCG 351



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+G  I + +A    ++ ++  G++Y+FGK S      G   T   T PQL++S
Sbjct: 258 PKVIEALKGQLIQKVSAANQFSIALTKTGKLYSFGKGS--GTGLGTPDTSYST-PQLIQS 314

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L ++ ++    G+     L++ G VY   WG ++  + G     N +     +  L+ + 
Sbjct: 315 LADVIIIDVTTGDGHCLALTQRGDVY--GWGTNSMGQCGQGHNNNSISKPGKVEGLDGVQ 372

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSV 181
           V QI+AG  + +     P+     +V
Sbjct: 373 VQQISAGTSHSIVWTAIPNDRCATAV 398


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 89  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   +  +A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 20/196 (10%)

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+   G +G G+
Sbjct: 130 QLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS 188

Query: 248 EECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
              + +P +V   L +   + +A G      V + G+VY +G   +  LG  +       
Sbjct: 189 TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS------- 241

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
              N  TP  V +L+ +  + V           AHT  LT+ G++YA+GA   GQLG   
Sbjct: 242 -SGNQPTPCRVAALQGIRVQRVACGY-------AHTLVLTDEGQVYAWGANSYGQLG--- 290

Query: 367 VNNQTERGNPERVDID 382
             N++ +  P  V ++
Sbjct: 291 TGNKSNQSYPTPVTME 306



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P  +E    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVTMEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 112/217 (51%), Gaps = 16/217 (7%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVL----SREGRVYTFSWGNDARLGHHTEPNDVE 143
           LV +P+++ESL   F+   A G + TA L      +  ++T   G + RLGH  E +   
Sbjct: 231 LVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGRLGHGDEEDRHL 290

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRL 202
           P P+   LEN+ +  IA G  +    AC  SG  +Y  G    GKLG GS R  +  P+ 
Sbjct: 291 PTPVH-ALENLNITAIACGAHHT---ACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKH 346

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQAL 260
           +    L N   V VA G+ H+A V  DG + TWG GR   LGH    E  E +P+ V+AL
Sbjct: 347 VGG-PLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEVQGESDEFLPRRVEAL 403

Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
             +  IHV  GD  T  + E+G+V+++G   S  LGH
Sbjct: 404 VGLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGH 438



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 52/353 (14%)

Query: 35  NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
           + +P    +L+GI     AAG  +  ++S +G++Y +G +S  E + G    +  + P++
Sbjct: 99  SSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNS--EGQLGTGDRRDASVPRV 156

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH------------------ 136
           V++L+   V   A     T     +G  Y +    + RLG H                  
Sbjct: 157 VKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGA 216

Query: 137 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-----------QPSGMAVYSVGCG 184
            T+    EP      +    V++   GY ++  +AC           +    ++++ G G
Sbjct: 217 PTKGARTEPLASACLVCTPRVLESLCGY-FITDVACGIYHTAFLGVYEQHKTSLFTCGLG 275

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           L G+LGHG   D   P  +   + LN+    +A GA H A V   G +  WG   +G LG
Sbjct: 276 LNGRLGHGDEEDRHLPTPVHALENLNI--TAIACGAHHTACVTSGGTLYMWGGAAFGKLG 333

Query: 245 HGNEE-CESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            G+    + +PK V   L +   + VA G   +  V+ DG++Y++G G    LGH     
Sbjct: 334 LGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR--LGHEV--- 388

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
            QG   ++   P+ V       E +V + + + +  +AHT  + E+G ++A+G
Sbjct: 389 -QG--ESDEFLPRRV-------EALVGLFVIHVVCGDAHTACIVENGNVWAWG 431



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 55/324 (16%)

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           +SP+LV++LK I     A G    AV+S+ G +Y +   ++ +LG     +   P  ++ 
Sbjct: 100 SSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPR-VVK 158

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------- 190
            L+   +V++ A  C      C     + Y+ GC L G+LG                   
Sbjct: 159 ALQGK-IVKVVA--CAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPG 215

Query: 191 ---HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG----QDGRVCTWG 236
               G+RT+          PR++E   L       VA G +H A +G        + T G
Sbjct: 216 APTKGARTEPLASACLVCTPRVLES--LCGYFITDVACGIYHTAFLGVYEQHKTSLFTCG 273

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            G  G LGHG+EE   +P  V AL ++    +A G + T  V+  G +Y +G      LG
Sbjct: 274 LGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYMWGGAAFGKLG 333

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +       R + +L   +   L+  N+ VV ++L +      H+  +T  G+LY +G 
Sbjct: 334 LGS------TRGSQLLPKHVGGPLR--NKTVVSVALGSQ-----HSACVTTDGELYTWGQ 380

Query: 357 GDKGQLGIELVNNQTERGNPERVD 380
           G +  LG E V  +++   P RV+
Sbjct: 381 GRR--LGHE-VQGESDEFLPRRVE 401



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           +   PRL++  + +N     VAAG    AVV Q G +  WG    G LG G+    SVP+
Sbjct: 98  ESSSPRLVDALKGIN--SASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPR 155

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           VV+AL       VA     T    +DG  Y++GC  +  LG + ++
Sbjct: 156 VVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLS 201



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+   ++  A G+  +  ++  G++Y +G+       + VQG      P+ VE+L  +FV
Sbjct: 351 LRNKTVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEVQGESDEFLPRRVEALVGLFV 408

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP----LLGTLENIPVVQI 159
           +    G+  TA +   G V+  +WG    LGH     D+E  P     L  L    VVQ+
Sbjct: 409 IHVVCGDAHTACIVENGNVW--AWGTSRILGH----GDLEAPPNRPSCLRALSGKGVVQL 462

Query: 160 AAGYCYLLALACQP 173
           +    +  A  C P
Sbjct: 463 SCAPTFTAAF-CDP 475


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 42/342 (12%)

Query: 34  VNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ 93
           V   PL   S + +R+   A+G   ++L +  G V A+G ++ G+   G   T   +SP 
Sbjct: 35  VQARPLRSGSPRAVRL---ASGKAHSLLATPDGTVRAWGDNASGQLGDGT--TTQRSSPT 89

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTL 151
            V  L     V A  G  ++  L  +G V   +WGN+   +LG  T P+   P  + G  
Sbjct: 90  AVPGLAGAVAVSA--GGEYSLALLGDGTVR--AWGNNTYGQLGDGTTPHRASPGAVPGLS 145

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               VV IAAG  + LAL    +   V + G    G+LG G+ T  + P       +L L
Sbjct: 146 G---VVAIAAGNNHALALLSDGT---VRAWGYNAYGQLGDGTTTQRRTP-----VAVLGL 194

Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
             VV +AAG  H+  V  DG V  WG   YG LG G     + P +V +L  V AI  A 
Sbjct: 195 TGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AA 252

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  V  DG V ++G   S  LG     DG   + A   TP  V  L  V E    I
Sbjct: 253 GANHSLAVLADGTVRAWGYNASGRLG-----DGTTTQRA---TPVAVPGLTGVTE----I 300

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           S         H+ AL   G   A+G+   GQLG   V+N+T 
Sbjct: 301 SAGG-----GHSLALLADGTARAWGSNVSGQLGDGTVSNRTS 337



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 145/327 (44%), Gaps = 35/327 (10%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L G+  +   AG   ++ +   G V A+G ++ G+   G   T    +P  V  
Sbjct: 438 PVVVPALTGV--VSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGT--TNQRGTPVQVSG 493

Query: 98  LKNIFVVQAAIGNFFTAV-LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           L N+  +    G  + A+ L  +G V  + +  + +LG  +  N   P  + G L N  V
Sbjct: 494 LTNVVALSG--GKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSG-LTN--V 548

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IAAG  Y LAL  Q +G  V S G G+ G LG    T    P+ +     +    V +
Sbjct: 549 VAIAAGGDYSLAL--QSNGT-VQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNV----VAI 601

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAGA H   +  DG V  WG   +G LG G     + P  V  L +V AI  ATG   + 
Sbjct: 602 AAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNVVAI--ATGWDHSL 659

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +  DG VY++G   +  LG  + A+ +        TP  V  L      VV ++   + 
Sbjct: 660 ALRADGTVYAWGYNYARQLGDGSTANYR-------QTPAPVPGLTN----VVAVTAGGN- 707

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
                + AL  SG ++A+G    G+LG
Sbjct: 708 ----QSLALLSSGAVHAWGDNSHGELG 730



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 149/351 (42%), Gaps = 44/351 (12%)

Query: 28  NLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           N  GR  +GT      P+   SL G+  I  AAGA  ++ +   G V A+G ++ G    
Sbjct: 222 NTYGRLGDGTTTQRTSPVLVSSLTGVTAI--AAGANHSLAVLADGTVRAWGYNASGRLGD 279

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEP 139
           G   T    +P  V  L  +  + A  G+    +     R    +WG++   +LG  T  
Sbjct: 280 GT--TTQRATPVAVPGLTGVTEISAGGGHSLALLADGTAR----AWGSNVSGQLGDGTVS 333

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           N   P  L+ +L    V  ++AG  + LAL    +  A    G  + G+LG G+ T    
Sbjct: 334 NRTSP-VLVSSLTG--VTALSAGGNHSLALLADGTARAW---GANVSGQLGDGTTTQRTL 387

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           P  +     +      +AAG +H+  V  +G V  WG   YG LG G+    + P VV A
Sbjct: 388 PVGLPGLTGV----AALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPA 443

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L  V  + +  G   +  +  DG V ++G   S  LG     DG  N+     TP  V+ 
Sbjct: 444 LTGV--VSLTAGYDHSLALLSDGTVRAWGNNASGQLG-----DGTTNQRG---TPVQVSG 493

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           L  V      ++L+    +  H  AL   G + A+G    GQLG    +N+
Sbjct: 494 LTNV------VALSGGKLY--HALALLSDGTVRAWGYNMNGQLGDGSTSNR 536



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 148/328 (45%), Gaps = 38/328 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L G+  +  AAG   ++ +   G V A+G +++G+   G   T   T+P +V +
Sbjct: 388 PVGLPGLTGVAAL--AAGGYHSLAVLANGTVRAWGHNTYGQ--LGDGSTAQRTAPVVVPA 443

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  +  + A  G   +  L  +G V   +WGN+A  +LG  T      P  + G L N  
Sbjct: 444 LTGVVSLTA--GYDHSLALLSDGTVR--AWGNNASGQLGDGTTNQRGTPVQVSG-LTN-- 496

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV ++ G  Y  ALA    G  V + G  + G+LG GS ++   P  +    L N+  V 
Sbjct: 497 VVALSGGKLYH-ALALLSDGT-VRAWGYNMNGQLGDGSTSNRWTPVAVSG--LTNV--VA 550

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           +AAG  ++  +  +G V +WG+G YG LG   +     PK V  + +V AI  A G    
Sbjct: 551 IAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAI--AAGANHV 608

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG VY++G  +   LG          R+  V  P L          VV I    +
Sbjct: 609 LALRADGTVYAWGRNDFGQLGDGTTVQ----RNTPVQVPGLT--------NVVAI----A 652

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
             W+ H+ AL   G +YA+G     QLG
Sbjct: 653 TGWD-HSLALRADGTVYAWGYNYARQLG 679



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 113/278 (40%), Gaps = 36/278 (12%)

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           V+ A G   + + + +G V   +WG++A  +LG  T      P  + G       V ++A
Sbjct: 48  VRLASGKAHSLLATPDGTVR--AWGDNASGQLGDGTTTQRSSPTAVPGLAG---AVAVSA 102

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  Y LAL    +   V + G    G+LG G+      P  +     +    V +AAG  
Sbjct: 103 GGEYSLALLGDGT---VRAWGNNTYGQLGDGTTPHRASPGAVPGLSGV----VAIAAGNN 155

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           HA  +  DG V  WG+  YG LG G       P  V  L  V AI  A G+  +  V  D
Sbjct: 156 HALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAI--AAGENHSLAVLAD 213

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V ++G      LG     DG   +     +P LV+SL  V       +         H
Sbjct: 214 GTVRAWGNNTYGRLG-----DGTTTQRT---SPVLVSSLTGVTAIAAGAN---------H 256

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           + A+   G + A+G    G+LG       T+R  P  V
Sbjct: 257 SLAVLADGTVRAWGYNASGRLGD---GTTTQRATPVAV 291



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 17/225 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    L    ++  AAG   ++ +   G V ++G   +G    G        +P+ V 
Sbjct: 538 TPVAVSGL--TNVVAIAAGGDYSLALQSNGTVQSWGYGVYGP--LGRDYDTYSPTPKAVP 593

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            + N+  + A   +     L  +G VY +   +  +LG  T      P  + G L N  V
Sbjct: 594 GVTNVVAIAAGANHVL--ALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPG-LTN--V 648

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVV 215
           V IA G+ + LAL    +   VY+ G     +LG GS  + +  P  +    L N+  V 
Sbjct: 649 VAIATGWDHSLALRADGT---VYAWGYNYARQLGDGSTANYRQTPAPVPG--LTNV--VA 701

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           V AG   +  +   G V  WG   +G LG+G+      P  V  L
Sbjct: 702 VTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 40/252 (15%)

Query: 91  SPQLVE-SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTEPNDVEP 144
           +P LV+   K+I +V  + G  ++A ++  G VYT+ +    +LG     +H  P     
Sbjct: 219 TPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPR---- 274

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
             ++ +L N  +V IA G  ++ A++   SG  +Y+ G G+ G+LGHG      HP+ + 
Sbjct: 275 --VIRSLSNKSIVNIACGRQHMAAIS--KSG-DLYTWGLGVFGQLGHGKLKSLLHPKKVL 329

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE------------- 251
            F+    + V VA GA     V ++G + ++G G YG LG   E+ +             
Sbjct: 330 YFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLG-ATEDTQYMDWNNNGDRDDH 388

Query: 252 ---SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
              S+PK V+AL  VK   VA G   T  V+ D DVY++G G S  LG        G+R 
Sbjct: 389 LKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGF-------GDRK 441

Query: 309 ANVLTPQLVTSL 320
              L PQ V SL
Sbjct: 442 FQ-LVPQRVPSL 452



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 20/258 (7%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           + I+I+  +AG   +  ++  G VY +G +  G+   G+       +P+++ SL N  +V
Sbjct: 228 KSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQ--LGLGDRWYHGNPRVIRSLSNKSIV 285

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQIAAGY 163
             A G    A +S+ G +YT+  G   +LGH    + + P  +L    +   +VQ+A G 
Sbjct: 286 NIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGA 345

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLG------------HGSRTDEKHPRLIEQFQLL-N 210
            + +A++       ++S G G  G+LG            +G R D     L +Q + L +
Sbjct: 346 NFTMAVS---ENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALES 402

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           ++   VA G  H   V  D  V TWGWG  GCLG G+ + + VP+ V +L+  +   V+ 
Sbjct: 403 VKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSG 462

Query: 271 GDYTTFVV-SEDGDVYSF 287
           G+  T +V S D   ++F
Sbjct: 463 GEKHTLIVRSSDTTTFAF 480



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 98/178 (55%), Gaps = 14/178 (7%)

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G K+G     ++  P L++ F   +++ V ++AG  ++A V   G V TWG+   G LG 
Sbjct: 206 GSKVGEIVDKNQMTPVLVD-FGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGL 264

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G+      P+V+++L++   +++A G      +S+ GD+Y++G G    LGH  +     
Sbjct: 265 GDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKL----- 319

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               ++L P+ V   +Q  +++VQ++   +      T A++E+G+L++FG G+ GQLG
Sbjct: 320 ---KSLLHPKKVLYFEQQQKKIVQVATGANF-----TMAVSENGELFSFGHGEYGQLG 369



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 4/114 (3%)

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCT 234
           M+V S G G  G+LG     D+  P +I   QLL  + +  +A G  H+  V + G V +
Sbjct: 1   MSVISFGVGKQGQLGLDVNKDQLDPAVI---QLLKGKRIKQIACGEAHSLAVTEFGDVYS 57

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           WG G+ G LGH  +   + P +++AL   + + VA G+Y +  +++ G VY +G
Sbjct: 58  WGRGKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 15/124 (12%)

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G+ G LG    + +  P V+Q L   +   +A G+  +  V+E GDVYS+G G+
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
              LGH         + A    P L+ +L+  +ER+V+++       N H+ ALT++GK+
Sbjct: 63  EGELGH--------PQKAMTAPPALIKALE--HERIVKVACG-----NYHSLALTDTGKV 107

Query: 352 YAFG 355
           Y +G
Sbjct: 108 YQWG 111



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
            NE+ G+  L  R  +G P   RSL    I+  A G      IS +G +Y +G   FG+ 
Sbjct: 256 FNEK-GQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQL 314

Query: 80  EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
            +G   + L     L    +   +VQ A G  FT  +S  G +++F  G   +LG   + 
Sbjct: 315 GHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDT 374

Query: 140 N--------DVEPH------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
                    D + H        +  LE++ V ++A G+ + +A+        VY+ G G 
Sbjct: 375 QYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDND---VYTWGWGS 431

Query: 186 GGKLGHGSRTDEKHPRLI 203
            G LG G R  +  P+ +
Sbjct: 432 SGCLGFGDRKFQLVPQRV 449



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 7/107 (6%)

Query: 25  GKRNLLGREVNGT---PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           GK+  LG +VN     P   + L+G RI Q A G   ++ +++ G VY++G+    E E 
Sbjct: 9   GKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK--EGEL 66

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           G     +   P L+++L++  +V+ A GN+ +  L+  G+VY   WG
Sbjct: 67  GHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVY--QWG 111



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 75  SFG---EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
           SFG   + + G+   K    P +++ LK   + Q A G   +  ++  G VY++  G + 
Sbjct: 5   SFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEG 64

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
            LGH  +     P  L+  LE+  +V++A G  + LAL 
Sbjct: 65  ELGHPQKAMTAPP-ALIKALEHERIVKVACGNYHSLALT 102


>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1271

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 35/355 (9%)

Query: 29  LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           L G  V  TP   R   GI+  Q  +GA  ++ +   G +YA+G +S G+   G   T L
Sbjct: 189 LGGTTVTLTPPATR---GIKFSQITSGATHSLALGSDGSLYAWGDNSSGQV--GDNSTTL 243

Query: 89  VTSPQLVESLKN----IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDV 142
             +P       N          A G+  +  +  +G +Y  +WGN+ R  LG  T  N +
Sbjct: 244 RQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLY--AWGNNTRGQLGDGTTENKL 301

Query: 143 EPHPL---LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEK 198
            P  +    G        Q++A + + LAL    S   +Y+ G    G+LG+ S  T   
Sbjct: 302 TPVKVPKPAGVSNEFTWTQVSARWDHTLALG---SNHNLYAWGWNGYGQLGNTSVPTGSD 358

Query: 199 HPRLIEQFQLLNLQPVVV-----AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
           +P       +L   P  V     +AG +H+  +G D ++  WG    G LG G +     
Sbjct: 359 NPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFT 418

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
           P  V+    V     + GD + F +S +GD+Y++G      LG  + A+ +  R   +++
Sbjct: 419 PVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDR--RTPTLIS 476

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
           P    S      RV        +  + H  A+   G LY++G  + GQLGI+ +N
Sbjct: 477 PPDGASAGFTWARV--------MVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDIN 523



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 137/353 (38%), Gaps = 34/353 (9%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGN 110
           AAG   ++ I   G +YA+G ++ G+   G    KL  V  P+           Q +   
Sbjct: 266 AAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKPAGVSNEFTWTQVSARW 325

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP--------LLGTLENIPVVQIAAG 162
             T  L     +Y + W    +LG+ + P   + +P        L+ T   +   Q++AG
Sbjct: 326 DHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSD-NPAAYSSKPVLVSTPAGVTFTQLSAG 384

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             + LAL    S   +Y+ G    G+LG G+      P  + Q   +       +AG   
Sbjct: 385 RYHSLALG---SDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPAGVTFS--QFSAGDTS 439

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKA----IHVATGDYTTFV 277
              +  +G +  WGW  YG LG G N E    P ++   +   A      V   D     
Sbjct: 440 CFAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLA 499

Query: 278 VSEDGDVYSFGCGESASLGHNAI-ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           +  DG++YS+G  E   LG   I  DG     + +  P +V        +    +  N+ 
Sbjct: 500 IGSDGNLYSWGLNEYGQLGIKDINTDG-----SYISRPHIVDQSTSSTAQKFTWTQINAG 554

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELV-----NNQTERGNPERVDIDLS 384
           +    + AL   G LY +G  + GQLG   V     N+Q  R  P      LS
Sbjct: 555 W--RESSALGSDGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLAAFPLS 605



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 112/293 (38%), Gaps = 36/293 (12%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGE-----AEYGVQGTKLVTS-PQLVESLKNIFV 103
            Q +A    T+ +     +YA+G + +G+        G       +S P LV +   +  
Sbjct: 319 TQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTF 378

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            Q + G + +  L  + ++Y +      RLG  T+     P P+      +   Q +AG 
Sbjct: 379 TQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVR-QPAGVTFSQFSAGD 437

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAG-AW 221
               A++       +Y+ G    G+LG GS   D + P LI         P   +AG  W
Sbjct: 438 TSCFAISTNGD---LYAWGWNGYGRLGDGSNAEDRRTPTLISP-------PDGASAGFTW 487

Query: 222 --------HAAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKA---- 265
                   H   +G DG + +WG   YG LG  +   +    S P +V       A    
Sbjct: 488 ARVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFT 547

Query: 266 -IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
              +  G   +  +  DG++Y++G      LG   +  G  N  A  LTP L 
Sbjct: 548 WTQINAGWRESSALGSDGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLA 600



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 138/365 (37%), Gaps = 52/365 (14%)

Query: 37   TPLYCRSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK----LVTS 91
            TP+      G+ R  Q +AG G ++ +   G V+A+G +S G+       T       +S
Sbjct: 803  TPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSS 862

Query: 92   PQLVESLKNIFVVQ---AAIGNFFTAVLSREGRVYTFSWGND------------ARLGHH 136
            P  V++   +         I    T VL+ +G+   + WG++            A  G  
Sbjct: 863  PIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGIT 922

Query: 137  TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT- 195
            T P  V+     G        Q++AG  + LA   Q  G A +  G    G LG+ S   
Sbjct: 923  TRP--VQVATPQGETTGFHYAQVSAGGSHSLATDTQ--GRA-WGWGSNQNGALGNTSDVA 977

Query: 196  -DEKHPRLIEQFQLLN----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
             +      ++     N      P  + AG+ H+  +   GR+ +WG    G LG G+   
Sbjct: 978  LNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTT 1037

Query: 251  ESVPKVVQALNDVKAIHVATGDY---TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
             + P +V    +V      TG      +  + ++G+++ +G   S  LG      G  NR
Sbjct: 1038 RTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQNSSGMLGTGGT--GSLNR 1095

Query: 308  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
               +  P  +    +V                 HT A+   G    +G   +G+LG    
Sbjct: 1096 PTKMSNPSGIDHFVKVCAGT------------GHTLAVASDGSTLGWGDNSQGRLG---- 1139

Query: 368  NNQTE 372
            NN TE
Sbjct: 1140 NNATE 1144



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 48/372 (12%)

Query: 39   LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
            L   + +GIR  Q +AG   ++ +   G VY++G + +G+   G   T  +T  Q+ +  
Sbjct: 753  LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGT-ATDRLTPVQIPKPT 811

Query: 99   KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-----------HHTEPNDVEPHPL 147
                  Q + G  F+  L  +G V+ +   +  +LG           + + P  V+  P 
Sbjct: 812  GVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQ-APS 870

Query: 148  LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
              T  N  +  I+AG  ++LA+  Q  G A +  G    GKLG  + T           Q
Sbjct: 871  GMTATNFTLTGISAGITHVLAVDGQ--GRA-WGWGSNEFGKLGVPASTVATTGITTRPVQ 927

Query: 208  LLNLQPVV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--VPKVVQ 258
            +   Q          V+AG  H+      GR   WG  + G LG+ ++   +      VQ
Sbjct: 928  VATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQ 987

Query: 259  AL------NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-V 311
            A              +  G   +  + + G ++S+G   +  LG   + D       + V
Sbjct: 988  AKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELG---LGDTTTRTAPSMV 1044

Query: 312  LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL---GIELVN 368
              P  V++  Q+    V          + ++ AL ++G ++ +G    G L   G   +N
Sbjct: 1045 AMPANVSTFTQLTGSRV----------SGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLN 1094

Query: 369  NQTERGNPERVD 380
              T+  NP  +D
Sbjct: 1095 RPTKMSNPSGID 1106



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 20/220 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +  G+   Q +AG   ++ +    Q+YA+G ++ G    G    +    P  V  
Sbjct: 367 PVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVP--VRQ 424

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
              +   Q + G+     +S  G +Y + W    RLG  +   D     L+      P  
Sbjct: 425 PAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLIS-----PPD 479

Query: 158 QIAAGYCYLLALACQPSGMAV------YSVGCGLGGKLG-HGSRTDEKH---PRLIEQFQ 207
             +AG+ +   +      +A+      YS G    G+LG     TD  +   P +++Q  
Sbjct: 480 GASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSYISRPHIVDQST 539

Query: 208 LLNLQPVV---VAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
               Q      + AG   ++ +G DG + TWGW   G LG
Sbjct: 540 SSTAQKFTWTQINAGWRESSALGSDGNLYTWGWNNGGQLG 579


>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 30/259 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI---- 101
           G++I   + G   T+ +SD GQV+ +G    G+   G +  K+V+SP L+  +++     
Sbjct: 270 GVKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGLGSR-VKMVSSPHLIPCIESAGKDK 328

Query: 102 --------------------FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
                               +V+  + G   + V++  G + TF WG   + G     + 
Sbjct: 329 SSAFHQGSGAGAQGSNVTGSYVMDISCGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQ 388

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           + P  L+ +L    V +IAAG  + L   C      +Y+ G    G+LG G+   E  PR
Sbjct: 389 LRP-TLVPSLLGTRVEKIAAGLWHTL---CVTVNGQIYAFGGNQFGQLGTGTDQPETSPR 444

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            ++  +  N    +V+ GA H+A++  DG + TWGW +YG LG G+    ++P  V ++ 
Sbjct: 445 QLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIPGQV-SIA 503

Query: 262 DVKAIHVATGDYTTFVVSE 280
             +  +VA G + T ++ +
Sbjct: 504 GCRPRNVACGWWHTLLLGD 522



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 25/232 (10%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP LV     + +   ++G   T  LS  G+V+ + +G + +LG  +    V    L
Sbjct: 258 FTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHL 317

Query: 148 LGTLENIPVVQIAAGY--------------CYLLALACQ-------PSGMAVYSVGCGLG 186
           +  +E+    + +A +               Y++ ++C            A+ + G GL 
Sbjct: 318 IPCIESAGKDKSSAFHQGSGAGAQGSNVTGSYVMDISCGGRHSVVITDAGALLTFGWGLY 377

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+ G G+  D+  P L+    LL  +   +AAG WH   V  +G++  +G  ++G LG G
Sbjct: 378 GQCGQGNNVDQLRPTLVP--SLLGTRVEKIAAGLWHTLCVTVNGQIYAFGGNQFGQLGTG 435

Query: 247 NEECESVPKVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            ++ E+ P+ + A    +  +  V+ G   + ++++DG ++++G  +   LG
Sbjct: 436 TDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLG 487



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    SL G R+ + AAG   T+ ++  GQ+YAFG + FG+   G    +  TSP+ +++
Sbjct: 391 PTLVPSLLGTRVEKIAAGLWHTLCVTVNGQIYAFGGNQFGQLGTGTDQPE--TSPRQLDA 448

Query: 98  --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
              +N      + G   +A+L+ +G ++T+ W    +LG
Sbjct: 449 SRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLG 487



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 23/180 (12%)

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
           KH  +   +QL     VV AA  W H A V ++G V  WGW          +EC    KV
Sbjct: 136 KHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGW----------KECVPSGKV 185

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN--AIADGQGNRHANVLTP 314
           +     V ++        +  ++E G   S      +   H+   + D    R     + 
Sbjct: 186 ITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRKITFSR 245

Query: 315 QLVTSLKQVNERVV----QISLTNSIYWNA------HTFALTESGKLYAFGAGDKGQLGI 364
           Q   S    +E        ++L N +   +      HT AL++ G+++ +G G +GQLG+
Sbjct: 246 QDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGL 305


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 35/302 (11%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
           ++ A+G + FG+   GV    +  S   V+   ++ V   A G+  + +LS +G+V+T+ 
Sbjct: 1   KLVAWGDNDFGQ--LGVSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILS-DGKVFTWG 57

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTL-----ENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
                +LGH        P   LG+L      +   VQ+AAGY + +AL  +     ++  
Sbjct: 58  QNKHGQLGH-------GPSDYLGSLGPTAKTDGKCVQVAAGYNFSMALTDRGE---IFVF 107

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G G  G L  G    +  P++I+   +       +  G  H A + + G+  TWG G  G
Sbjct: 108 GEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDG 167

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LGH + + E  P+ V+ L +V    ++ G   T  ++ D  +Y+ G G+   LGH    
Sbjct: 168 QLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGH---- 223

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
                   + L P+ V +L+ V E             + HT  +     +Y FG+G +GQ
Sbjct: 224 ----GDERSYLYPKKVETLQAVKEVSCG---------DYHTACIDGKSIIYTFGSGTRGQ 270

Query: 362 LG 363
           LG
Sbjct: 271 LG 272



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 18/202 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLV-TSPQLVESLK--NIF 102
           + +Q AAG   +M ++D G+++      FGE  +GV  QG +L  +SPQ+++SL      
Sbjct: 84  KCVQVAAGYNFSMALTDRGEIFV-----FGEGRHGVLAQGDELSKSSPQVIDSLSVPGYV 138

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V +   G    A + R G+  T+  G+D +LGH +  ++  P  +   L N+ V  I+ G
Sbjct: 139 VDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVE-HLANVSVRTISCG 197

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   L    S  ++Y+ G G  GKLGHG      +P+ +E  Q +      V+ G +H
Sbjct: 198 SKHTCFLT---SDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQAVK----EVSCGDYH 250

Query: 223 AAVVGQDGRVCTWGWGRYGCLG 244
            A +     + T+G G  G LG
Sbjct: 251 TACIDGKSIIYTFGSGTRGQLG 272


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 35/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+ ++  KN+ +     G     +LS +G+ + +    D  + H    +          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSES---------I 133

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L 
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 188

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++AG  H+  +   G V +WG   +G LG G+ E +  P +++AL++ K   +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + ++++DG +++FG G+   LGHN+          N L P LV  L  V  RV Q
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVTQ 298

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+      W  HT A +++ GK+++FG+G  GQLG
Sbjct: 299 IACGR---W--HTLAYVSDLGKVFSFGSGKDGQLG 328



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 135/270 (50%), Gaps = 26/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +        E +Y +   K + S  +++
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQ 135

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  
Sbjct: 136 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAG 189

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +P+ QI+AG  + +AL+   SG  VYS G    G+LG G    +  P LIE   L N + 
Sbjct: 190 VPLAQISAGEAHSMALSM--SG-NVYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKV 244

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H+A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRW 304

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 305 HTLAYVSDLGKVFSFGSGKDGQLGNGGTLD 334



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ + Q +AG   +M +S +G VY++GK+ FG+   G+  T+   SP L+E
Sbjct: 180 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQ--LGLGHTESKDSPSLIE 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 238 ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRV 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   D+  P
Sbjct: 297 TQIACGRWHTLAYVSDLG--KVFSFGSGKDGQLGNGGTLDQLIP 338



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 114/220 (51%), Gaps = 14/220 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLAGVPL 192

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIA 160
            Q + G   +  LS  G VY  SWG +   +LG  HTE  D     L+  L+N  V  +A
Sbjct: 193 AQISAGEAHSMALSMSGNVY--SWGKNEFGQLGLGHTESKDSP--SLIEALDNQKVEFLA 248

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+   +L+  +   +A G 
Sbjct: 249 CGGSH-SALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGNRVTQIACGR 303

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           WH  A V   G+V ++G G+ G LG+G    + +P  V+ 
Sbjct: 304 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G +    + P++V+ L  V    ++ G+
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G+VYS+G  E     LGH    D          +P L+ +L   N++V  +
Sbjct: 200 AHSMALSMSGNVYSWGKNEFGQLGLGHTESKD----------SPSLIEALD--NQKVEFL 247

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     H+  LT+ G L+ FGAG  GQLG     N+
Sbjct: 248 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 282



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 39/202 (19%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + C P  +AV   G G G ++        G+RT    P+ I+  +  N++   V  GA H
Sbjct: 56  ICCSPRRLAVLERG-GAGVQVHQVLAGSGGART----PKCIKLGK--NMKIHSVDQGADH 108

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             ++  DG+   + +     + H   E          L + K I +  GDY +  +S+ G
Sbjct: 109 MLILSSDGKPFEYDYS----MKHLRSE--------SILQEKKIIQITCGDYHSLALSKGG 156

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           +++++G      LG        G +  +  TPQ+V  L  V   + QIS        AH+
Sbjct: 157 ELFAWGQNLHGQLG-------VGRKFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 202

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
            AL+ SG +Y++G  + GQLG+
Sbjct: 203 MALSMSGNVYSWGKNEFGQLGL 224


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 38/304 (12%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           I ++G V+ FGK  F +            +P     LKN   ++ + G+  TA+++  G+
Sbjct: 9   IPESGAVFTFGKSKFAD-----------NAPSKF-WLKNDVPLRISCGDEHTALVTENGK 56

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV 181
           ++ F   N  +LG  T+    +P   +  L++  V   A G  + L    + +   +Y+ 
Sbjct: 57  LFMFGSNNWGQLGLGTKTTVNKP-TCVKALKSERVKLTACGRTHTLVFTSRGN---LYAC 112

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PV-VVAAGAWHAAVVGQDGRVCTWGWGR 239
           G    G+LG G   D     L+E F   N Q P+ ++AAG+  +A + QDGR+  WG   
Sbjct: 113 GGNNEGQLGLGDCNDRTSFHLVEFF---NKQGPIKMLAAGSNTSAALTQDGRLYMWGDNS 169

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G +G G E     P+ V     V    V+ G Y +  V+ DG +Y+FG  +S  LG + 
Sbjct: 170 EGQIGLGKESNALTPQEVSVGKRV--FWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLST 227

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
                  + AN   PQ VT    + +RVVQ++         HT ALTE+ ++Y+FG G  
Sbjct: 228 ------EKLANHKVPQQVTD---IPDRVVQVACG-----GGHTVALTEN-EVYSFGLGQF 272

Query: 360 GQLG 363
           GQLG
Sbjct: 273 GQLG 276



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 27/317 (8%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           ++ + G   T L+++ G+++ FG +++G+   G + T  V  P  V++LK+  V   A G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT--VNKPTCVKALKSERVKLTACG 96

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
              T V +  G +Y     N+ +LG     +    H +    +  P+  +AAG     AL
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
                   +Y  G    G++G G  ++   P+ +     +  +   V+ G +H+A V  D
Sbjct: 157 T---QDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVTVD 209

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYSF 287
           G + T+G    G LG   E+  +  KV Q + D+  + + VA G   T  ++E+ +VYSF
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYSF 267

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G G+   LGH                    + L +V E   +  + ++     HT  +T+
Sbjct: 268 GLGQFGQLGHGTFI--------------FESRLPRVVEHFRKGRVKHAACGENHTALITD 313

Query: 348 SGKLYAFGAGDKGQLGI 364
           +G LY FG G  G+LG+
Sbjct: 314 NGLLYTFGDGRHGKLGL 330



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 15/199 (7%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           AAG+  +  ++  G++Y +G +S G+   G +   L  +PQ V   K +F V  + G + 
Sbjct: 147 AAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWV--SCGYYH 202

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAAGYCYLLALA 170
           +A ++ +G +YTF   +  +LG  TE   +  H +   + +IP  VVQ+A G  + +AL 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTE--KLANHKVPQQVTDIPDRVVQVACGGGHTVAL- 259

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
              +   VYS G G  G+LGHG+   E   PR++E F+   ++    A G  H A++  +
Sbjct: 260 ---TENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHA--ACGENHTALITDN 314

Query: 230 GRVCTWGWGRYGCLGHGNE 248
           G + T+G GR+G LG G E
Sbjct: 315 GLLYTFGDGRHGKLGLGEE 333



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 14/275 (5%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G+  L  +     P   ++L+  R+   A G   T++ +  G +YA G ++  E + G+ 
Sbjct: 66  GQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNN--EGQLGLG 123

Query: 85  GTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
                TS  LVE   K   +   A G+  +A L+++GR+Y +   ++ ++G   E N + 
Sbjct: 124 DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALT 183

Query: 144 PHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           P  + +G      V  ++ GY +   +       A+Y+ G    GKLG  +     H ++
Sbjct: 184 PQEVSVGK----RVFWVSCGYYHSAFVTVDG---ALYTFGEKDSGKLGLSTEKLANH-KV 235

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALN 261
            +Q   +  + V VA G  H   + ++  V ++G G++G LGHG    ES +P+VV+   
Sbjct: 236 PQQVTDIPDRVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFR 294

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             +  H A G+  T +++++G +Y+FG G    LG
Sbjct: 295 KGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
           +F L N  P+ ++ G  H A+V ++G++  +G   +G LG G +   + P  V+AL   +
Sbjct: 30  KFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSER 89

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
               A G   T V +  G++Y+ G      LG      G  N   +     LV    +  
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL-----GDCNDRTSF---HLVEFFNKQG 141

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              +  + +N+      + ALT+ G+LY +G   +GQ+G+
Sbjct: 142 PIKMLAAGSNT------SAALTQDGRLYMWGDNSEGQIGL 175



 Score = 46.6 bits (109), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 25/146 (17%)

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           + + G V T+G  ++          ++ P      NDV  + ++ GD  T +V+E+G ++
Sbjct: 9   IPESGAVFTFGKSKFA---------DNAPSKFWLKNDV-PLRISCGDEHTALVTENGKLF 58

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
            FG      LG              V  P  V +LK  +ERV   +   +     HT   
Sbjct: 59  MFGSNNWGQLGLGT--------KTTVNKPTCVKALK--SERVKLTACGRT-----HTLVF 103

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQT 371
           T  G LYA G  ++GQLG+   N++T
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDRT 129


>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
          Length = 1884

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 35/254 (13%)

Query: 111  FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-----LLGTLENIPVVQIAAGYCY 165
            F   VL R G VYT  WG+  +    T P+ +   P         +E + V+ ++ G+C+
Sbjct: 828  FSHVVLIRNGNVYT--WGSSVQGCLGTGPSVLRYGPPQAISFFKIME-VEVLSVSCGHCH 884

Query: 166  LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV--AAGAWHA 223
             LA+    +   VY+ G    G+LG G       P LI        Q V++   AG +H+
Sbjct: 885  TLAV----TNNGVYAWGSSRFGQLGLGKILQCSTPELITYLA----QEVIIDAVAGQYHS 936

Query: 224  AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
              +  DGRV TWGWG +G LGHGN + + VP ++ +L      +++ G   T  +S +G 
Sbjct: 937  VALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLALSTEGI 996

Query: 284  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
            VY+FGC     LG    ++ + +    VL P+             +I L  + Y+  H  
Sbjct: 997  VYAFGCNIFGQLGVG--SNVKSSVPIKVLLPE-------------KIFLITTGYF--HNL 1039

Query: 344  ALTESGKLYAFGAG 357
            A++ + KLY +GA 
Sbjct: 1040 AVSYTNKLYVWGAS 1053



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 11/193 (5%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
            +  + ++  + G   T+ +++ G VYA+G   FG+   G+      ++P+L+  L    +
Sbjct: 870  IMEVEVLSVSCGHCHTLAVTNNG-VYAWGSSRFGQ--LGLGKILQCSTPELITYLAQEVI 926

Query: 104  VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            + A  G + +  L+ +GRV+T+ WG   +LGH      + P  L+ +L    +  I+AG+
Sbjct: 927  IDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVP-TLITSLLGTVIRYISAGH 985

Query: 164  CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
             + LAL+ +  G+ VY+ GC + G+LG GS      P  +    LL  +  ++  G +H 
Sbjct: 986  AHTLALSTE--GI-VYAFGCNIFGQLGVGSNVKSSVPIKV----LLPEKIFLITTGYFHN 1038

Query: 224  AVVGQDGRVCTWG 236
              V    ++  WG
Sbjct: 1039 LAVSYTNKLYVWG 1051



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 17/188 (9%)

Query: 178  VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            VY+ G  + G LG G S      P+ I  F+++ ++ + V+ G  H   V  +G V  WG
Sbjct: 839  VYTWGSSVQGCLGTGPSVLRYGPPQAISFFKIMEVEVLSVSCGHCHTLAVTNNG-VYAWG 897

Query: 237  WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              R+G LG G     S P+++  L     I    G Y +  ++ DG V+++G G    LG
Sbjct: 898  SSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLG 957

Query: 297  HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
            H       GN    ++ P L+TSL     R +          +AHT AL+  G +YAFG 
Sbjct: 958  H-------GNTDKKIV-PTLITSLLGTVIRYISAG-------HAHTLALSTEGIVYAFGC 1002

Query: 357  GDKGQLGI 364
               GQLG+
Sbjct: 1003 NIFGQLGV 1010


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 106/225 (47%), Gaps = 22/225 (9%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV ++AG  + +AL    +G  + S G G  G+LGHG   D   P ++  F         
Sbjct: 24  VVLVSAGASHSVALL---AGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITS 80

Query: 216 VAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           V  GA H     +D  +V +WGWG +G LGHGN      P+ V+AL  +K   +A GD  
Sbjct: 81  VICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSH 140

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
              V+  G+V S+G  ++  LG     D         L PQ + S + V  +++      
Sbjct: 141 CLAVTMAGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQSFEGVCVKMIAAGAE- 191

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 HT A+TE G LY +G G  G LG+    ++ +R  PE+V
Sbjct: 192 ------HTAAVTEDGDLYGWGWGRYGNLGL---GDRNDRLVPEKV 227



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 10/153 (6%)

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           TA    E +VY++ WG+  RLGH    +   P P+   L+ I + QIA G  + LA+   
Sbjct: 89  TAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPV-KALQGIKIKQIACGDSHCLAVT-- 145

Query: 173 PSGMA--VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
              MA  V S G    G+LG G+  D   P+ I+ F+ + ++  ++AAGA H A V +DG
Sbjct: 146 ---MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVK--MIAAGAEHTAAVTEDG 200

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
            +  WGWGRYG LG G+     VP+ V ++ ++
Sbjct: 201 DLYGWGWGRYGNLGLGDRNDRLVPEKVSSVENM 233



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   ++LQGI+I Q A G    + ++ AG+V ++G++  G+   G     L+  PQ ++
Sbjct: 119 TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL--PQKIQ 176

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN--- 153
           S + + V   A G   TA ++ +G +Y + WG    LG     + + P   + ++EN   
Sbjct: 177 SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEK-VSSVENMFL 235

Query: 154 -IPVVQIAAGYC 164
            IP +     YC
Sbjct: 236 KIPSLYATGLYC 247



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           +NG+  L   E +  P   +S +G+ +   AAGA  T  +++ G +Y +G   +G    G
Sbjct: 157 QNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 216

Query: 83  VQGTKLVTSPQLVESLKNIFV 103
            +  +LV  P+ V S++N+F+
Sbjct: 217 DRNDRLV--PEKVSSVENMFL 235


>gi|432959904|ref|XP_004086396.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 homolog [Oryzias
           latipes]
          Length = 496

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 136/272 (50%), Gaps = 32/272 (11%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C +   +  + +   A  ++L++  G+++++G
Sbjct: 88  IGRKEVPKQQAAFRNL-GQNLWGPHHYGCLNDVQVSCVVSGPCAAHSLLMTTDGKLWSWG 146

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK + +P+L+E+L    +V AA G   T VL+ +G  Y+F      +
Sbjct: 147 RNDKGQLGHG--DTKRIEAPKLIEALAEQVIVSAACGRNHTLVLTEDGTAYSFGENKLGQ 204

Query: 133 LGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           LG   + + V  P P+  +    P+V+++ G  + + + C+ +   +YS GC   G+LGH
Sbjct: 205 LGQGNQTDAVLSPAPI--SYNGQPLVKVSCGAEFSMVVDCKGN---LYSFGCPEYGQLGH 259

Query: 192 GSRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQD 229
            S               E  PR +  F       Q++ +  VVV   A G  H  V+   
Sbjct: 260 NSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGGNHTLVLDSQ 319

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
            RV +WG+G YG LGH  ++ E VP++V+  +
Sbjct: 320 KRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD 351



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 15/230 (6%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L ++ V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 110 PH-HYGCLNDVQVSCVVSGPCAAHSLLMTTDG-KLWSWGRNDKGQLGHGDTKRIEAPKLI 167

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E    L  Q +V AA G  H  V+ +DG   ++G  + G LG GN+    +     + N 
Sbjct: 168 E---ALAEQVIVSAACGRNHTLVLTEDGTAYSFGENKLGQLGQGNQTDAVLSPAPISYNG 224

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
              + V+ G   + VV   G++YSFGC E   LGHN+    IA  Q       L P+ V 
Sbjct: 225 QPLVKVSCGAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVA 284

Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
              + ++    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 285 IFIEKSKDGQIMPVPNVVVRDVACGGNHTLVLDSQKRVFSWGFGGYGRLG 334



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 43/298 (14%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+ AA G   T+++++ G  Y+FG++  G+   G Q T  V SP  + S     +V+ + 
Sbjct: 175 IVSAACGRNHTLVLTEDGTAYSFGENKLGQLGQGNQ-TDAVLSPAPI-SYNGQPLVKVSC 232

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL----------- 147
           G  F+ V+  +G +Y+F      +LGH+++            D E  P            
Sbjct: 233 GAEFSMVVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKD 292

Query: 148 --LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ 
Sbjct: 293 GQIMPVPNVVVRDVACGGNHTLVLDSQKR---VFSWGFGGYGRLGHTEQKDEMVPRLVKL 349

Query: 206 FQLLNLQPVVVAAG---AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           F         + AG   ++        G +  WG      + + + E    PK VQ L  
Sbjct: 350 FDFPGRGAAQIYAGYQCSFAVXXXXXXGGLFFWG------VTNTSRESTMYPKAVQDLCG 403

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            K   +A G  ++ +++ D    S+  G S + G     D   N+  +  T Q V +L
Sbjct: 404 WKIRSLACGK-SSIIIAADESTISW--GPSPTFGELGYGD---NKPKSSTTAQEVKTL 455



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 40/88 (45%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           RE    P   + L G +I   A G    ++ +D   +      +FGE  YG    K  T+
Sbjct: 389 RESTMYPKAVQDLCGWKIRSLACGKSSIIIAADESTISWGPSPTFGELGYGDNKPKSSTT 448

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
            Q V++L  I++ Q  +G   T  ++R+
Sbjct: 449 AQEVKTLDGIYIEQVVMGYSHTLAIARQ 476


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 89  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   +  +A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P  VE    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 63/359 (17%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           Q  R+I +   AG ++LIS  G+ Y+FG++S G+  +G   T+ +  P+ + +LK   ++
Sbjct: 109 QKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNII 166

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            AA+G   +  ++  G VY       A+ G  HT P  + P  +  T    P+V++  G 
Sbjct: 167 HAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHTTPQILVPTRVRYT--GAPIVKVGCGA 224

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQFQLL---------- 209
            + + L C     A++S G    G+LGH   TD K+     +L   F+++          
Sbjct: 225 EFSMILDCN---GALHSFGLPEYGQLGH--NTDGKYFVTSTKLSYHFEMVPKHIAFFFEK 279

Query: 210 ----------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
                     ++  V  + G  H   +    R  +WG+G +G LGH  +  ESVP++++ 
Sbjct: 280 SKDGHVSPVKDVDIVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKY 339

Query: 260 LND----VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            +     V+++H   G   +  V+E G ++ FG  +           G+ N     + P+
Sbjct: 340 FDSQARGVRSVHC--GATYSLAVNEHGALFMFGQTKRT---------GEAN-----MYPK 383

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK-GQLGIELVNNQTER 373
            V  L   N R V  S T        +  +     L A+G     G+LG   +N  T R
Sbjct: 384 PVQDLTGWNIRSVGTSNT--------SIVIAADDSLIAWGVSPTYGELGTGDINKSTAR 434



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 56/332 (16%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+G  II AA G   ++ ++D G VYA G +   +   G       T+PQ++   +  +
Sbjct: 159 TLKGFNIIHAAVGRNHSLFVTDTGTVYACGDNKSAQCGLG------HTTPQILVPTRVRY 212

Query: 103 ----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN------------DVEPHP 146
               +V+   G  F+ +L   G +++F      +LGH+T+              ++ P  
Sbjct: 213 TGAPIVKVGCGAEFSMILDCNGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKH 272

Query: 147 L-----------LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT 195
           +           +  ++++ +V  + G  + +A+    S    YS G G  G+LGH  + 
Sbjct: 273 IAFFFEKSKDGHVSPVKDVDIVDFSCGNNHTVAID---SKKRAYSWGFGGFGRLGHAEQR 329

Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           DE  PRLI+ F         V  GA ++  V + G +  +G  +         E    PK
Sbjct: 330 DESVPRLIKYFDSQARGVRSVHCGATYSLAVNEHGALFMFGQTKR------TGEANMYPK 383

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            VQ L       V T + T+ V++ D  + ++G   S + G      G G+ + +   P+
Sbjct: 384 PVQDLTGWNIRSVGTSN-TSIVIAADDSLIAWGV--SPTYGEL----GTGDINKSTARPK 436

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
            VT ++ +N  + Q+++  S     HT  L++
Sbjct: 437 EVTRMEGLN--ITQVAMGYS-----HTLLLSD 461



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 25/175 (14%)

Query: 195 TDEKHPRL--IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           + + HP L    +F     + +V    A H+ ++  +G   ++G    G LG G+    +
Sbjct: 93  SKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRN 152

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LGHNAIADGQGNRHAN 310
           +P+ +  L     IH A G   +  V++ G VY+ G  +SA   LGH             
Sbjct: 153 IPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYACGDNKSAQCGLGHT------------ 200

Query: 311 VLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             TPQ++  T ++     +V++           +  L  +G L++FG  + GQLG
Sbjct: 201 --TPQILVPTRVRYTGAPIVKVGCGAEF-----SMILDCNGALHSFGLPEYGQLG 248


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 94  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 152

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 153 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 212

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   +  +A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 213 VTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 267

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D +  I      +T+
Sbjct: 268 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTS 327

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 328 AAKTQGGHVYMWGQCRGQSVILPH 351



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 125 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 244 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 288

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V ++
Sbjct: 289 NSYGQLG---TGNKSNQSYPTPVTVE 311



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 239 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 298

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P  VE    I  + A      +A  ++ G VY   WG
Sbjct: 299 KSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 340


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 8/266 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+       ++ I A+ G    + I+D G  Y++G +  G+  +   GTKL   P+L+ES
Sbjct: 427 PIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL-PKLIES 485

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           +K   +  AA+    +A++S  G +YTF   +  +LG     +   P  L+  L    V 
Sbjct: 486 IKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQ-LVKALLGHHVS 544

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            ++ G  +++   C  SG  V++ G    G+LG G     K P    Q  L N     VA
Sbjct: 545 MVSCGLYHMVL--CTISG-EVFTCGKNDHGQLGLGHNKQVKVP---TQVVLPNELVCFVA 598

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
            G +HA  +   G   ++G   YG LG G++  +++P  +   ++ + +H A G Y T +
Sbjct: 599 CGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLL 658

Query: 278 VSEDGDVYSFGCGESASLGHNAIADG 303
           +S+ G V+ FG      LG+    D 
Sbjct: 659 MSDSGQVFVFGRNNKGQLGNRGNTDS 684



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 141/301 (46%), Gaps = 15/301 (4%)

Query: 67   QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 126
            ++++ G++++GE   G              S K+I  +  A GN    VL ++G V+T  
Sbjct: 3134 EIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSI--AGGNEVLVVLMKDGAVFTCG 3191

Query: 127  WGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
                 + G  + +   + P P+   L  IP+  +AA       LA    G AVYS G   
Sbjct: 3192 LNKSGQCGIGNFDERLIVPSPI-PALSGIPITMVAASNGCEHMLAISHDG-AVYSWGYND 3249

Query: 186  GGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCL 243
             G+LG G+   + H PR+IE  +      +  AA ++H +AVV  +G + T+G    G L
Sbjct: 3250 RGQLGLGTTVSKSHTPRVIESLREKYF--ITFAAVSYHHSAVVSNNGDLLTFGMNDSGQL 3307

Query: 244  GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            G  + + +  P++V+ L+  K   VA G Y T  + +DGDVYSFG  E   LG +   + 
Sbjct: 3308 GLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNT 3367

Query: 304  QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +      +        L  VN + VQ+      Y+  HT  + E GK+  +G  D GQLG
Sbjct: 3368 KVPMLVKIPPAPRTPMLDAVN-KAVQVYCG---YY--HTVTILECGKVVTWGRNDYGQLG 3421

Query: 364  I 364
            I
Sbjct: 3422 I 3422



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 13/277 (4%)

Query: 28   NLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
            N   R +  +P+   S   I ++ A+ G    + IS  G VY++G +  G+   G   +K
Sbjct: 3202 NFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSK 3261

Query: 88   LVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP 146
              T P+++ESL+   F+  AA+    +AV+S  G + TF   +  +LG     +   P  
Sbjct: 3262 SHT-PRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQ- 3319

Query: 147  LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE-- 204
            L+ TL +  V ++A G  + +A+        VYS G    G+LG     + K P L++  
Sbjct: 3320 LVETLSSQKVGRVACGLYHTVAIV---DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIP 3376

Query: 205  ---QFQLLNL--QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
               +  +L+   + V V  G +H   + + G+V TWG   YG LG G++E +S+ + V  
Sbjct: 3377 PAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPL 3436

Query: 260  LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
                +    + G Y T ++  +G    FG      LG
Sbjct: 3437 PLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 20/197 (10%)

Query: 177  AVYSVGCGLGGKLGHGSRTDEKH--PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
            AV++ G    G+ G G+  DE+   P  I     + +  V  + G  H   +  DG V +
Sbjct: 3186 AVFTCGLNKSGQCGIGN-FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYS 3244

Query: 235  WGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGES 292
            WG+   G LG G    +S  P+V+++L +   I  A   Y  + VVS +GD+ +FG  +S
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LG     D   ++H    TPQLV +L   +++V +++    +Y   HT A+ + G +Y
Sbjct: 3305 GQLG----LDHTQHQH----TPQLVETLS--SQKVGRVAC--GLY---HTVAIVDDGDVY 3349

Query: 353  AFGAGDKGQLGIELVNN 369
            +FG  + GQLG+    N
Sbjct: 3350 SFGKNEYGQLGLSHTQN 3366



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 18/262 (6%)

Query: 27  RNLLGREVNGTPLY----CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           R  LG E  GT LY      S++  ++  AA     + L+S +G++Y FG +  G+   G
Sbjct: 465 RGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQ--LG 522

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPND 141
           +  T+  ++PQLV++L    V   + G +   + +  G V+T    +  +LG  H +   
Sbjct: 523 LDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK 582

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           V   P    L N  V  +A GY +  A A   +G+  YS G    G+LG GS+  +  P 
Sbjct: 583 V---PTQVVLPNELVCFVACGYYH--ATAITSTGL-TYSFGRNDYGQLGIGSKIHQNIP- 635

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP---KVVQ 258
            I      N + V  A G +H  ++   G+V  +G    G LG+       +P   KV  
Sbjct: 636 -IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRP 694

Query: 259 ALNDVKAIHVATGDYTTFVVSE 280
             N  + +H+A G YTT ++ E
Sbjct: 695 EKNMRRCLHIAAGFYTTSLIVE 716



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 30/304 (9%)

Query: 66  GQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 123
           G++Y+ G++S+GE   G  ++  +L + P          + Q   GN   A+L+ +G V 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD----HIRQVVSGNEILAILTSDGVVL 403

Query: 124 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           T       + GH      V     +  L +  V  I A       +A   +G+A YS G 
Sbjct: 404 TCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLA-YSWGY 462

Query: 184 GLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
              G+LGH +  T    P+LIE  +   ++   V+    H+A+V   G + T+G    G 
Sbjct: 463 NDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYH--HSALVSVSGELYTFGMNDCGQ 520

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAI 300
           LG  + + +S P++V+AL       V+ G Y   + +  G+V++ G  +   LG  HN  
Sbjct: 521 LGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNK- 579

Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
              Q      V+ P         NE V  ++     Y+  H  A+T +G  Y+FG  D G
Sbjct: 580 ---QVKVPTQVVLP---------NELVCFVACG---YY--HATAITSTGLTYSFGRNDYG 622

Query: 361 QLGI 364
           QLGI
Sbjct: 623 QLGI 626



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 39/231 (16%)

Query: 157 VQIAAGYCYLLALACQP------SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           V I+     L AL  QP      S   +YS G    G+LG G          IE+ QL +
Sbjct: 323 VNISPSLSKLSALREQPMYGKCESFGELYSCGQNSYGELGLGDD--------IERHQLTS 374

Query: 211 LQPVV-------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND 262
           + P+        V +G    A++  DG V T G  + G  GHGN +E   + + +QAL  
Sbjct: 375 V-PLCGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRS 433

Query: 263 --VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
             VK I+ + G      +++ G  YS+G  +   LGH  +          +  P+L+ S+
Sbjct: 434 HRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG-------TKLYLPKLIESI 486

Query: 321 KQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           K+   +   +S         H+  ++ SG+LY FG  D GQLG++   +Q+
Sbjct: 487 KEKKMKSAAVSY-------HHSALVSVSGELYTFGMNDCGQLGLDHTQHQS 530



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 22/186 (11%)

Query: 189  LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGN 247
            LGH + T++     +E+    + + +   AG     VV  +DG V T G  + G  G GN
Sbjct: 3148 LGHCNPTNK-----LERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGN 3202

Query: 248  -EECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
             +E   VP  + AL+ +    VA   G      +S DG VYS+G  +   LG        
Sbjct: 3203 FDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLG-------L 3255

Query: 305  GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            G   +   TP+++ SL++      +  +T +     H+  ++ +G L  FG  D GQLG+
Sbjct: 3256 GTTVSKSHTPRVIESLRE------KYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGL 3309

Query: 365  ELVNNQ 370
            +   +Q
Sbjct: 3310 DHTQHQ 3315



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 8/197 (4%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            TP   ++L G  +   + G    +L + +G+V+  GK+  G  + G+   K V  P  V
Sbjct: 530 STPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG--QLGLGHNKQVKVPTQV 587

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             L N  V   A G +    ++  G  Y+F   +  +LG  ++ +   P  L  +  N  
Sbjct: 588 -VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS-SNTR 645

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           +V  A G CY   L    SG  V+  G    G+LG+   TD   P  ++     N++  +
Sbjct: 646 MVHAACG-CY-HTLLMSDSGQ-VFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCL 702

Query: 216 -VAAGAWHAAVVGQDGR 231
            +AAG +  +++ +  R
Sbjct: 703 HIAAGFYTTSLIVERKR 719


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 89  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   +  +A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
              GQLG     N++ +  P  V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P  VE    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 151/327 (46%), Gaps = 36/327 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L G+  +  +AGA  ++ I   G V+A+G ++ G+   G    +LV  P  V+ 
Sbjct: 377 PVQVQGLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV--PVQVQG 432

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  +  V A  G  F+  +  +G V+ + +    +LG  T    + P  + G      VV
Sbjct: 433 LSGVVAVVA--GTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGL---SGVV 487

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 216
            +AAG  + LA+    +   V+++G    G+LG GS T+   P      Q+  L  VV V
Sbjct: 488 AVAAGNLHSLAVRSDGT---VWALGRNDNGQLGDGSWTNRSAP-----VQVTGLSGVVSV 539

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAG  H+  V  DG V  WG+  +G LG G+    S P  V  L+   ++  A+ DY + 
Sbjct: 540 AAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV-AASSDY-SM 597

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V  DG V+++G      L       G G   +N L P  V  L+     VV + + +S 
Sbjct: 598 AVRYDGTVWAWGFNLYGQL-------GDGTTSSNQLVPVQVQQLRG----VVAVEVGSS- 645

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
               H+ AL   G ++ +G    GQLG
Sbjct: 646 ----HSLALRSDGTVWTWGYNSFGQLG 668



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 48/364 (13%)

Query: 15  LRPD--IINERNGKRNLLG---REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY 69
           +RPD  +    N     LG   R+   TP+    L    ++ AAAG+  ++ + + G V+
Sbjct: 1   MRPDGTVWAAGNNGSGQLGDGTRDNRSTPVQVLGLS--EVVAAAAGSIHSLALRNDGTVW 58

Query: 70  AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
           A+G + +G+   G  G++    P  V+ L     V A  G++ +  +  +G V+  +WG+
Sbjct: 59  AWGYNGYGQLGNGSLGSR--AEPVQVQGLSGGVSVDA--GHYHSLAVRDDGTVW--AWGD 112

Query: 130 --DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
             + +LG  T    + P  + G  E   VV + AG  + LAL    +   V++ G    G
Sbjct: 113 NPNGQLGEGTTTRRLVPVQVQGLSE---VVAVTAGSSHSLALRSDGT---VWAWGANASG 166

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG G+ T+   P       +L L  VV V AG+ H+  +  DG V  WG    G LG G
Sbjct: 167 QLGEGTTTNRLVP-----VPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDG 221

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
                 VP  VQ L+ V A+   +G   +  V  DG V+++G   S  LG + +      
Sbjct: 222 TTTKRLVP--VQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTVTSRS-- 275

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
                 TP  V  L +    VV ++  +S+     + AL   G ++A+G+ D GQ G   
Sbjct: 276 ------TPVQVLGLSE----VVAVAAGSSL-----SLALRSDGTVWAWGSNDYGQRGEGT 320

Query: 367 VNNQ 370
            +N+
Sbjct: 321 TSNR 324



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 135/316 (42%), Gaps = 37/316 (11%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++   AG+  ++ +   G V+A+G ++ G+   G    +LV     V+ L  +  ++A  
Sbjct: 188 VVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVP----VQVLSGVVAMEA-- 241

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+ ++  +  +G V+ + +    +LG  T  +   P  +LG  E   VV +AAG    LA
Sbjct: 242 GSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSE---VVAVAAGSSLSLA 298

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP-VVVAAGAWHAAVVG 227
           L    +   V++ G    G+ G G+ ++   P      Q   L   V VAAG  H+  V 
Sbjct: 299 LRSDGT---VWAWGSNDYGQRGEGTTSNRAFP-----VQARGLSGGVAVAAGYAHSLAVR 350

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            DG V  WG    G LG G     S P  VQ L+ V  + V+ G  ++  +  DG V+++
Sbjct: 351 SDGTVWAWGSNASGQLGEGTTSNRSEPVQVQGLSGV--VAVSAGASSSLAIRSDGTVWAW 408

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G   S  LG     D         L P  V  L  V   V   S          + A+  
Sbjct: 409 GSNASGQLGDGTTTD--------RLVPVQVQGLSGVVAVVAGTSF---------SLAVRN 451

Query: 348 SGKLYAFGAGDKGQLG 363
            G ++ +G    GQLG
Sbjct: 452 DGTVWGWGYNGYGQLG 467



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 38/314 (12%)

Query: 66  GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           G V+A G +  G+   G +  +  ++P  V  L    VV AA G+  +  L  +G V+ +
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDNR--STPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAW 60

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
            +    +LG+ +  +  EP  + G       V + AG+ +  +LA +  G  V++ G   
Sbjct: 61  GYNGYGQLGNGSLGSRAEPVQVQGLSGG---VSVDAGHYH--SLAVRDDGT-VWAWGDNP 114

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
            G+LG G+ T    P  ++       + V V AG+ H+  +  DG V  WG    G LG 
Sbjct: 115 NGQLGEGTTTRRLVPVQVQGLS----EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGE 170

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G      VP  V  L++V A+    G   +  +  DG V+++G   S  LG     DG  
Sbjct: 171 GTTTNRLVPVPVLGLSEVVAVEA--GSSHSLALRSDGTVWAWGANASGQLG-----DGTT 223

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
            +    L P       QV   VV +        + ++ A+   G ++A+G    GQLG +
Sbjct: 224 TKR---LVP------VQVLSGVVAMEAG-----SGYSLAVRNDGTVWAWGYNFSGQLGDD 269

Query: 366 LVNNQTERGNPERV 379
            V   T R  P +V
Sbjct: 270 TV---TSRSTPVQV 280



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 17/210 (8%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L G+  +  AAG   ++ +   G V+A G++  G+   G    +  ++P  V  
Sbjct: 477 PVQVTGLSGV--VAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNR--SAPVQVTG 532

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L    VV  A G+  +  +  +G V+ + + +  +LG  +      P  + G L     V
Sbjct: 533 LSG--VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTG-LSGRGSV 589

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVV 216
             ++ Y     +A +  G  V++ G  L G+LG G+ +  +  P  ++Q + +    V V
Sbjct: 590 AASSDYS----MAVRYDGT-VWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGV----VAV 640

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
             G+ H+  +  DG V TWG+  +G LG+G
Sbjct: 641 EVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670


>gi|60099075|emb|CAH65368.1| hypothetical protein RCJMB04_23b17 [Gallus gallus]
          Length = 385

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 30/265 (11%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
           I R ++  ++   RNL G+ + G   Y C S   +R + +   A  ++LI+  G+++++G
Sbjct: 124 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVQVRSVVSGPCAAHSLLITAEGKLWSWG 182

Query: 73  KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
           ++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G VY F      +
Sbjct: 183 RNEKGQLGHG--DTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQ 240

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+LGH 
Sbjct: 241 LGLGNQ-TDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 296

Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
           S               E  PR +  F       Q+L +  VVV   A GA H  V+    
Sbjct: 297 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 356

Query: 231 RVCTWGWGRYGCLGHGNEECESVPK 255
           RV +WG+G YG LGH  ++ E VP+
Sbjct: 357 RVFSWGFGGYGRLGHAEQKDEMVPR 381



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           PH   G L  + V  + +G C   +L     G  ++S G    G+LGHG     + P+LI
Sbjct: 146 PH-RYGCLSGVQVRSVVSGPCAAHSLLITAEG-KLWSWGRNEKGQLGHGDTKRVEAPKLI 203

Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           E   +L  + +V+AA G  H   + + G V  +G  + G LG GN+  ++VP   Q + +
Sbjct: 204 E---VLGSEAIVLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQT-DAVPSPTQIMYN 259

Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
            + I  +A G   + ++   G++YSFGC E   LGHN+    IA  Q   +   L P+ V
Sbjct: 260 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 319

Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
               +  +    + + N +  +      HT  L    +++++G G  G+LG
Sbjct: 320 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 370



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 54/276 (19%)

Query: 57  GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           GR  +          G++ +G   YG    VQ   +V+ P    SL              
Sbjct: 125 GRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPCAAHSL-------------- 170

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
             +++ EG+++++      +LGH  +   VE   L+  L +  +V  A G  + LAL   
Sbjct: 171 --LITAEGKLWSWGRNEKGQLGH-GDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALT-- 225

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDG 230
               +VY+ G    G+LG G++TD    P  I    + N QP+  +A GA  + ++   G
Sbjct: 226 -ETGSVYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 280

Query: 231 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAI 266
            + ++G   YG LGH ++            +CE VP+ V              + +V   
Sbjct: 281 NLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 340

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            VA G   T V+     V+S+G G    LGH    D
Sbjct: 341 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 376



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 33/138 (23%)

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           WG  RYGCL        S  +V   ++   A H       + +++ +G ++S+G  E   
Sbjct: 144 WGPHRYGCL--------SGVQVRSVVSGPCAAH-------SLLITAEGKLWSWGRNEKGQ 188

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LGH     G   R   V  P+L+  L   +E +V  +   +     HT ALTE+G +YAF
Sbjct: 189 LGH-----GDTKR---VEAPKLIEVLG--SEAIVLAACGRN-----HTLALTETGSVYAF 233

Query: 355 GAGDKGQLGIELVNNQTE 372
           G    GQLG+    NQT+
Sbjct: 234 GENKMGQLGL---GNQTD 248


>gi|118373349|ref|XP_001019868.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89301635|gb|EAR99623.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 403

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 29/290 (10%)

Query: 21  NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           N RNG +    +     P    +LQ I  +  + G    + +++  Q+Y  G + +G   
Sbjct: 87  NSRNGHQ--ANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQNQLYVTGHNKYGAC- 141

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
            G+ G   +   QL +++KNI +   + G+ F+  L    +VY+  +        H    
Sbjct: 142 -GISGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDINQQVYSSGFRQ-----MHGNKE 195

Query: 141 DVEPHPL--LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
           D   + +  +  LE I +  I AG+C+  A+  Q  G  VY+ G G   +LGHG+   +K
Sbjct: 196 DQHQYQIKKIKELEGIAIKHINAGFCHS-AVVTQERG-EVYTWGSGNFYQLGHGNTKSQK 253

Query: 199 HPRLIEQFQLLNLQPVVVAAGA--WHAAVVGQDGRVCTWGWGRYGCLGHGNEEC------ 250
            P  I    L  ++ V  + G    H      DG+V +WG G  G LGH N         
Sbjct: 254 TPLKINN--LSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKLGHQNSWSHEDPAD 311

Query: 251 ESVPKVVQALNDVKAIHVA---TGDYTTFVVSEDGDVYSFGCGESASLGH 297
           ES P+ +Q L + K I +A   +G   + V+S+DG +++FGCG    LGH
Sbjct: 312 ESRPRPIQYLQE-KGIVIAKSISGGIHSAVLSQDGRLFTFGCGSDGRLGH 360



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 23/306 (7%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
           IS   ++Y +G+     +  G Q  K  +  PQ + +L+NI  V  + GN+    L+ + 
Sbjct: 73  ISSKNELYTWGETK--NSRNGHQANKNYILVPQKIMNLQNISHV--SCGNWHCLALNNQN 128

Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
           ++Y          G  +  +++    L  T++NI +  I+AG  + L L        VYS
Sbjct: 129 QLYVTGHNKYGACGI-SGIDEINGFQLNDTIKNIQICSISAGDGFSLYLDI---NQQVYS 184

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD-GRVCTWGWGR 239
            G     +  HG++ D+   ++ +  +L  +    + AG  H+AVV Q+ G V TWG G 
Sbjct: 185 SGF----RQMHGNKEDQHQYQIKKIKELEGIAIKHINAGFCHSAVVTQERGEVYTWGSGN 240

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGESASLGH 297
           +  LGHGN + +  P  +  L+ ++ +  + G+    T   S DG VYS+G G    LGH
Sbjct: 241 FYQLGHGNTKSQKTPLKINNLSGIEQVSCSRGEKYCHTTATSSDGKVYSWGSGYKGKLGH 300

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                 +    A+   P+ +  L++       I +  SI    H+  L++ G+L+ FG G
Sbjct: 301 QNSWSHE--DPADESRPRPIQYLQEKG-----IVIAKSISGGIHSAVLSQDGRLFTFGCG 353

Query: 358 DKGQLG 363
             G+LG
Sbjct: 354 SDGRLG 359



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 19/142 (13%)

Query: 228 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
           QDG + TWG    GCL +  E + E +P  V+     K+  V+TG +    +S   ++Y+
Sbjct: 24  QDGFLYTWGKNSSGCLANQKEDQGEIIPFKVKTNQKFKS--VSTGGFFGAAISSKNELYT 81

Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
           +G  +++  GH      Q N++  +L PQ + +L    + +  +S  N   W  H  AL 
Sbjct: 82  WGETKNSRNGH------QANKNY-ILVPQKIMNL----QNISHVSCGN---W--HCLALN 125

Query: 347 ESGKLYAFGAGDKGQLGIELVN 368
              +LY  G    G  GI  ++
Sbjct: 126 NQNQLYVTGHNKYGACGISGID 147


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 40/332 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P YC    GI+ +  + G      I+    VY+ G ++ G+   G    K+  SP LVE+
Sbjct: 109 PRYCTYNIGIKYV--SCGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEA 166

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP------HPLLGTL 151
           L +   +  A G   T V +  G VY++  G    LG     +   P      H  L T 
Sbjct: 167 LMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTK 226

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
             +  +Q++AG  +   L    SG  VY+ G    G+LG G R  E  P  I++F     
Sbjct: 227 SQM--IQVSAGMRFSAIL--DQSGR-VYTCGQNDAGQLGIGGRDQENIPISIKKFPE--- 278

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
           +  ++A G  H  ++ + G V + G   +G LG  N+   S P ++Q ++ +   +VA G
Sbjct: 279 RVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAG 338

Query: 272 DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
            ++  +  + GD+Y +G G                     LTP  V ++K +    V +S
Sbjct: 339 SFSASISYDSGDLYLWGSGVFGEF----------------LTPHRVKTIKGM---TVSVS 379

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + N         A+ + G +Y++G  + G+LG
Sbjct: 380 IGNHF-----GIAVNQDGIVYSWGHNNSGELG 406



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 38/305 (12%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           ++  +P+   +L   + I  A GA  T++ ++ G VY++G+  FG    G    + +  P
Sbjct: 156 KMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFL--P 213

Query: 93  QLVESLKNIF-----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           +L+    +       ++Q + G  F+A+L + GRVYT    +  +LG      D E  P+
Sbjct: 214 KLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLG--IGGRDQENIPI 271

Query: 148 LGTLENIP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +++  P  V  IA G  +LL L  Q +   VYS G    G+LG  ++ +   P LI+ 
Sbjct: 272 --SIKKFPERVSMIACGQMHLLMLTKQGT---VYSCGANSFGQLGLNNKRNSSSPLLIQD 326

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
              + ++   VAAG++ A++    G +  WG G +G            P  V+ +  +  
Sbjct: 327 ISHIPMR--YVAAGSFSASISYDSGDLYLWGSGVFGEF--------LTPHRVKTIKGM-T 375

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           + V+ G++    V++DG VYS+G   S  LG     +          TPQ++    Q+N+
Sbjct: 376 VSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERP--------TPQIIN---QLND 424

Query: 326 RVVQI 330
           ++V +
Sbjct: 425 KIVTL 429



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 178 VYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           ++S G    G+LG G S+  + +P  + ++   N+    V+ G  HAA +     V + G
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYP--VPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMG 141

Query: 237 WGRYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
               G LG G+   + ++ P +V+AL D K I +A G   T V +E GDVYS+G G   +
Sbjct: 142 SNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGA 201

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG        GN     L   +  S  Q++ +   I ++  + ++A    L +SG++Y  
Sbjct: 202 LG-------AGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSA---ILDQSGRVYTC 251

Query: 355 GAGDKGQLGI 364
           G  D GQLGI
Sbjct: 252 GQNDAGQLGI 261



 Score = 46.6 bits (109), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 20/148 (13%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           N KRN      + +PL  + +  I +   AAG+    +  D+G +Y +G   FGE     
Sbjct: 313 NNKRN------SSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGE----- 361

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
                  +P  V+++K +  V  +IGN F   ++++G VY++   N   LG      D  
Sbjct: 362 -----FLTPHRVKTIKGM-TVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGD--FDER 413

Query: 144 PHP-LLGTLENIPVVQIAAGYCYLLALA 170
           P P ++  L +  V  ++ G  + +AL 
Sbjct: 414 PTPQIINQLNDKIVTLVSCGRNFSIALG 441



 Score = 39.3 bits (90), Expect = 3.7,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 232 VCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           + +WG  + G LG G  +  +S P       ++   +V+ GD     ++    VYS G  
Sbjct: 84  IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSN 143

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
            +  LG   ++    N      +P LV +L  ++++ + I+   +     HT   TE G 
Sbjct: 144 TNGQLGVGDMSLKMKN------SPMLVEAL--MDQKPISIACGAN-----HTLVCTERGD 190

Query: 351 LYAFGAGDKGQLGIELVNNQ 370
           +Y++G G  G LG   +++Q
Sbjct: 191 VYSWGQGIFGALGAGNLDDQ 210


>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
          Length = 443

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 49/337 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +I+ A AG   T+ +++ G+VY FG +  G            T P  V+ L     +Q +
Sbjct: 93  KIVSAVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDLLGR--GIQLS 150

Query: 108 IGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAG 162
            G+  TAVL+ EG+V  F+WGN  DA        + ++  P+    E +P   V++IA+G
Sbjct: 151 AGDSHTAVLTDEGKV--FAWGNFRDANGKIGLTSDGIQEKPI----EMLPGETVIKIASG 204

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGH--------GSRTDEKH---PRLIEQFQLLNL 211
             +LL   C      +YS GC   G+LG         G R    +   P +I   +  + 
Sbjct: 205 GDHLL---CLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSK 261

Query: 212 QPVV---VAAGAWHAAVVGQD-GRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAI 266
           + VV   V AG + +    +D G +  WG   Y  LG  + E + VP  V+A++ DVK  
Sbjct: 262 KRVVFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVT 321

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            V  G +    +   G VY+ G GE   LGH     G  N    V     +   KQV   
Sbjct: 322 MVDAGQHHAICLDTAGKVYTVGRGEYGRLGH-----GDSNEEKRVPAILDLPPCKQV--- 373

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                        A ++A+T SG++YA+G G   QLG
Sbjct: 374 ---------AAGQAVSYAVTNSGEIYAWGMGTSQQLG 401



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 28/298 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           R IQ +AG   T +++D G+V+A+G       + G+    +   P  +E L    V++ A
Sbjct: 145 RGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKP--IEMLPGETVIKIA 202

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----------PHPLLGTLENIPVV 157
            G      L+ +G +Y+       +LG   E   V              ++  L +    
Sbjct: 203 SGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKK 262

Query: 158 QIAAGYCY---LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
           ++     Y    ++ A +    ++Y+ G     +LG     ++  P  ++     +++  
Sbjct: 263 RVVFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSE-DVKVT 321

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDY 273
           +V AG  HA  +   G+V T G G YG LGHG+   E   K V A+ D+     VA G  
Sbjct: 322 MVDAGQHHAICLDTAGKVYTVGRGEYGRLGHGDSNEE---KRVPAILDLPPCKQVAAGQA 378

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
            ++ V+  G++Y++G G S  LG     D        V TPQL+T  +    +V+ +S
Sbjct: 379 VSYAVTNSGEIYAWGMGTSQQLGSGDDED--------VTTPQLITGKQLQTRKVIAVS 428



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 28/280 (10%)

Query: 20  INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE- 78
             + NGK  L    +   P+    L G  +I+ A+G    + +++ G++Y+ G    G+ 
Sbjct: 171 FRDANGKIGLTSDGIQEKPI--EMLPGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQL 228

Query: 79  --------AEYGVQGTKLVTSPQLVESL-----KNIFVVQAAIGNFFTAVLSRE-GRVYT 124
                      G +G   +  P ++  L     K +       G + +    ++ G +Y 
Sbjct: 229 GRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQYMSYAREKDTGSIYA 288

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           +   N  +LG +   N   P  +    E++ V  + AG  + +   C  +   VY+VG G
Sbjct: 289 WGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAI---CLDTAGKVYTVGRG 345

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
             G+LGHG   +EK    I     L+L P   VAAG   +  V   G +  WG G    L
Sbjct: 346 EYGRLGHGDSNEEKRVPAI-----LDLPPCKQVAAGQAVSYAVTNSGEIYAWGMGTSQQL 400

Query: 244 GHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSED 281
           G G++E  + P+++  + L   K I V+ G   T +++ D
Sbjct: 401 GSGDDEDVTTPQLITGKQLQTRKVIAVSGGGQHTVLLATD 440



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 23/238 (9%)

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           +  P L  +++  +V   AG  + +   C  +   VY+ GC   G LG  + ++E    L
Sbjct: 81  KSRPALVNIDDQKIVSAVAGGMHTV---CLTNKGEVYTFGCNDEGALGRNT-SEEGSETL 136

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-----GRYGCLGHGNEECESVPKVV 257
             +  LL  + + ++AG  H AV+  +G+V  WG      G+ G    G +E     K +
Sbjct: 137 PSKVDLLG-RGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQE-----KPI 190

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA-IADGQGNRHA--NVLTP 314
           + L     I +A+G      ++E G++YS GC E   LG  A     +G R     +L P
Sbjct: 191 EMLPGETVIKIASGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFSVRGGRKGLDYILKP 250

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTE--SGKLYAFGAGDKGQLGIELVNNQ 370
            ++  L+  +++ V   + + +Y   +     E  +G +YA+G  +  QLG   + N+
Sbjct: 251 AIIRCLRHKSKKRV---VFDDVYAGQYMSYAREKDTGSIYAWGLNNYYQLGTNDLENK 305



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 15/126 (11%)

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V   G G  G LG G +  E     +  ++D K +    G   T  ++  G+VY+FGC
Sbjct: 59  GVVLACGEGDVGQLGLGPDVMEKSRPALVNIDDQKIVSAVAGGMHTVCLTNKGEVYTFGC 118

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
            +  +LG N   +G           + + S   +  R +Q+S  +S     HT  LT+ G
Sbjct: 119 NDEGALGRNTSEEGS----------ETLPSKVDLLGRGIQLSAGDS-----HTAVLTDEG 163

Query: 350 KLYAFG 355
           K++A+G
Sbjct: 164 KVFAWG 169


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 168/353 (47%), Gaps = 45/353 (12%)

Query: 23  RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTML--ISDAGQVY-AFGKDSFGE- 78
           R+ +R++ GR     P      Q + +  + AG  RT+L  +    Q+  + G+ +F E 
Sbjct: 10  RHDRRSVAGRAAASQPAKSPGAQ-LWLFPSTAGLRRTLLRRVEATRQICCSSGRLAFLER 68

Query: 79  AEYGVQ------GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
              GVQ      G+  + +P+ ++  KN+ +    +G     +LS  G+ + +    D  
Sbjct: 69  GGAGVQVHQLLPGSDGLRTPKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEY----DNY 124

Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
              H     +        L+   ++QI  G  + LAL+    G  +++ G  L G+LG G
Sbjct: 125 SMKHLRFESI--------LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVG 173

Query: 193 SR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE 251
            +      P+++E    + L    ++AG  H+  +   G + +WG   +G LG  + E +
Sbjct: 174 RKFPSTTTPQIVEHLSGIPL--AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESK 231

Query: 252 SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANV 311
             P +++AL++ K   +A G   T ++++DG +++FG G+   LGHN+          N 
Sbjct: 232 DSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNST--------QNE 283

Query: 312 LTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           L P LV  L     RV QI+      W  HT A +++ GK+++FG+G +GQLG
Sbjct: 284 LRPCLVAEL--AGNRVTQIACGR---W--HTLAYVSDLGKVFSFGSGKEGQLG 329



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +          EY     K +    +++
Sbjct: 87  TPKCIKLGKNMKIHSMDLGADHMLILSSGGKPF----------EYDNYSMKHLRFESILQ 136

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  
Sbjct: 137 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLSG 190

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           IP+ QI+AG  + +AL+   SG  +YS G    G+LG      +  P LIE   L N + 
Sbjct: 191 IPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKV 245

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRW 305

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 306 HTLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  I +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLSGIPL 193

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIA 160
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D     L+  L+N  V  +A
Sbjct: 194 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLA 249

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+ +  L   +   +A G 
Sbjct: 250 CGGSHT-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE--LAGNRVTQIACGR 304

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVK 264
           WH  A V   G+V ++G G+ G LG+G   ++   +P  V +  D+K
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           GGK         KH R     Q    + + +  G +H+  + + G +  WG   +G LG 
Sbjct: 115 GGKPFEYDNYSMKHLRFESILQ--EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGV 172

Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--HNAIAD 302
           G +    + P++V+ L+ +    ++ G+  +  +S  G++YS+G  E   LG  H    D
Sbjct: 173 GRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKD 232

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
                     +P L+ +L   N++V  ++   S     HT  LT+ G L+ FGAG  GQL
Sbjct: 233 ----------SPSLIEALD--NQKVEFLACGGS-----HTALLTQDGLLFTFGAGKHGQL 275

Query: 363 GIELVNNQ 370
           G     N+
Sbjct: 276 GHNSTQNE 283



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 55/164 (33%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L GI + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+   SP L+E
Sbjct: 181 TPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQL--GLDHTESKDSPSLIE 238

Query: 97  SLKNIFVVQAAIGNFFTAVLSREG------------------------------------ 120
           +L N  V   A G   TA+L+++G                                    
Sbjct: 239 ALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVT 298

Query: 121 -----------------RVYTFSWGNDARLGHHTEPNDVEPHPL 147
                            +V++F  G + +LG+    + + P P+
Sbjct: 299 QIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 89  PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   +  +A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VTIACGQ--MCCMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   + +A G      V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P  +E    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVTMEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL   +I   + G+G   +L +  G+V+++G +++G+   G     LV S  +  
Sbjct: 89  PRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPS-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  VV   + +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S +L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVTLPH 346



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V+S G    G+LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFSWGHNAYGQLGNGTINHGLVPSHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   +++P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGHNA 299
           GCLG G+ +    P+ + +L+D K   ++ G     V+ + +G+V+S+G      LG+  
Sbjct: 76  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGT 135

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
           I  G        L P  + S    N++V +++       + H+  LT  G+++A+G  + 
Sbjct: 136 INHG--------LVPSHI-STNLSNKQVTEVACG-----SYHSLVLTSDGEVFAWGYNNS 181

Query: 360 GQLGIELVNNQTERGNPERV 379
           GQ+G     NQ     P RV
Sbjct: 182 GQVGSGSTANQ---AIPRRV 198


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 34/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+ ++  KN+ +     G     +LS +G+ + +   ++  + H    N          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEY---DNYSMKHLRFEN---------V 134

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L 
Sbjct: 135 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 189

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++AG  H+  +   G + +WG   +G LG G+ E +  P +++ L++ K   VA
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVA 249

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + ++++DG +++FG G+   LGHN+          N L P LV  L  V  RV Q
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGYRVTQ 299

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+      W  HT A +++ GK+++FG+G  GQLG
Sbjct: 300 IACGR---W--HTLAYVSDLGKVFSFGSGKDGQLG 329



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 25/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +          EY     K +    +++
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF----------EYDNYSMKHLRFENVLQ 136

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  
Sbjct: 137 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAG 190

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +P+ QI+AG  + +AL+   SG  +YS G    G+LG G    + +P LIE   L N + 
Sbjct: 191 VPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKV 245

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             VA G  H+A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 246 EFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRW 305

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 306 HTLAYVSDLGKVFSFGSGKDGQLGNGGTRD 335



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+    P L+E
Sbjct: 181 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQ--LGLGHTESKDYPSLIE 238

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 239 GLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGYRV 297

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   D+  P
Sbjct: 298 TQIACGRWHTLAYVSDLG--KVFSFGSGKDGQLGNGGTRDQLMP 339



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 16/220 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLAGVPL 193

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHP-LLGTLENIPVVQI 159
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D   +P L+  L+N  V  +
Sbjct: 194 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFV 248

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+ +  L+  +   +A G
Sbjct: 249 ACGGSHS-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE--LVGYRVTQIACG 303

Query: 220 AWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
            WH  A V   G+V ++G G+ G LG+G    + +P  V+
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G +    + P++V+ L  V    ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G++YS+G  E     LGH    D           P L+  L   N++V  +
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------YPSLIEGLD--NQKVEFV 248

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     H+  LT+ G L+ FGAG  GQLG     N+
Sbjct: 249 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 283



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 38/202 (18%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           L C P  +AV   G G G ++        G+RT    P+ I+  +  N++   V  GA H
Sbjct: 56  LCCSPGRLAVLERG-GAGVQVHQLLAGSGGART----PKCIKLGK--NMKIHSVDQGAEH 108

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             ++  DG+   + +  Y  + H   E          L + K I +  GDY +  +S+ G
Sbjct: 109 MLILSSDGK--PFEYDNYS-MKHLRFE--------NVLQEKKIIQITCGDYHSLALSKGG 157

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           +++++G      LG        G +  +  TPQ+V  L  V   + QIS        AH+
Sbjct: 158 ELFAWGQNLHGQLG-------VGRKFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 203

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
            AL+ SG +Y++G  + GQLG+
Sbjct: 204 MALSMSGNIYSWGKNEFGQLGL 225



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
           E    P     L   ++   A G   + L++  G ++ FG    G+   G   T+    P
Sbjct: 229 ESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ--LGHNSTQNELRP 286

Query: 93  QLVESLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            LV  L    V Q A G + T A +S  G+V++F  G D +LG+    + + P P+
Sbjct: 287 CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342


>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
 gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
          Length = 900

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 142/322 (44%), Gaps = 23/322 (7%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQAAIG 109
           + AAG   ++L+   G+V+A+G ++ G+   G  G  LV  P  V+ +L  + VVQ A G
Sbjct: 52  RVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAAG 111

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC--YLL 167
              +  L+ +G VY +  G   +LGH +      P  + G L+   VVQ+ A        
Sbjct: 112 PEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDAST 171

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           +LA    G  VY+ G  LGG+ GH                L   + V VAAG      + 
Sbjct: 172 SLAVVDDGT-VYTWGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAVRVAAGHVTGVALT 230

Query: 228 QDGRVCTWGWGRYGCLGHG-NEECESVPKVV---QALNDVKAIHVATGDYTTFVVSEDGD 283
            DGR   WG    G +G G     +  P  V    AL+  + +   +G   T V+ +DG 
Sbjct: 231 ADGRAFAWGSRVNGAVGDGLTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTAVIDDDGR 290

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQL--VTSLKQVNERVVQISLTNSIYWNAH 341
            Y +G G+  +LG            AN  TP L  + +L Q+  R VQI+   +      
Sbjct: 291 AYGWGAGDHGALGTGGT--------ANAPTPVLADMEALDQLGIRPVQITSGQNF----- 337

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           +  L   G+L A+G G  GQLG
Sbjct: 338 SVVLGADGRLAAWGNGTGGQLG 359



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 166/356 (46%), Gaps = 31/356 (8%)

Query: 31  GREVNGTPLYCR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTKL 88
           GR +   P+    +L G+R++Q AAG   ++ ++D G VYA+G  + G+  +G V+G+ +
Sbjct: 86  GRSLVPVPVAVDGALAGVRVVQVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEGSTV 145

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLS--REGRVYTFSWGNDARLGHHTEPNDV-EPH 145
                     + +  V+AA  +  +  L+   +G VYT+      R GH  E   + EP 
Sbjct: 146 PVRVAGDLDGRRVVQVEAAGTDDASTSLAVVDDGTVYTWGRNLGGRAGHAVEDLVLTEPT 205

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLI 203
            L G LE    V++AAG+   +AL     G A ++ G  + G +G G  S        ++
Sbjct: 206 ALAGALEGHRAVRVAAGHVTGVALTAD--GRA-FAWGSRVNGAVGDGLTSGVQLGPTPVV 262

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV--VQALN 261
               L   + V   +G    AV+  DGR   WG G +G LG G       P +  ++AL+
Sbjct: 263 GGGALSGARLVDAGSGLRRTAVIDDDGRAYGWGAGDHGALGTGGTANAPTPVLADMEALD 322

Query: 262 D--VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
              ++ + + +G   + V+  DG + ++G G    LG+ A A    + HA  +    V  
Sbjct: 323 QLGIRPVQITSGQNFSVVLGADGRLAAWGNGTGGQLGNGASAT---SWHAVAVGTDGV-- 377

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
           L  V   VV +S         HT AL   G++YA+G G  G+LG     N T RG+
Sbjct: 378 LDGVE--VVHVSAGQR-----HTVALGRDGQVYAWGQGLSGELG-----NGTGRGS 421


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 15/260 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+ + I+  A G    + I D G+VY +G +   + + G        SP+ ++SL N  
Sbjct: 73  ALETVHIVDIALGDSHILAIDDKGKVYGWGGND--KDQLGWTDGNCYPSPKKIKSLSNK- 129

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           +VQ A G+  +  L   G +++    N  +LG   + +  E  PL+ +L+ IP  QI+AG
Sbjct: 130 IVQVACGHSHSLFLGSNGALWSAGSNNYGQLG-FGDKSSTELRPLI-SLKGIPFSQISAG 187

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + +     C     AV+  G    G+LG G   D   P L++  + L+++   + AG  H
Sbjct: 188 FWHSF---CVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVK--YICAGELH 242

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECE----SVPKVVQALNDVKAIHVATG-DYTTFV 277
            A +  DG V T+G  ++G LGHG+   E    S P+ +  L   +   +A G  +T   
Sbjct: 243 TAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCY 302

Query: 278 VSEDGDVYSFGCGESASLGH 297
           V + G+VY+FG    + LG+
Sbjct: 303 VGKTGNVYTFGNNNHSQLGY 322



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 144/322 (44%), Gaps = 36/322 (11%)

Query: 48  RIIQAAAGAGRTM--LISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           + I  +    RT+   + + G V+ FG   D+ G +    +          V +L+ + +
Sbjct: 30  KTIIKSVRVSRTIAVFLLEDGTVHTFGAENDNIGHSAGSTK----------VSALETVHI 79

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
           V  A+G+     +  +G+VY   WG ND      T+ N       + +L N  +VQ+A G
Sbjct: 80  VDIALGDSHILAIDDKGKVY--GWGGNDKDQLGWTDGNCYPSPKKIKSLSN-KIVQVACG 136

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + + L L    S  A++S G    G+LG G ++  +   LI    L  +    ++AG WH
Sbjct: 137 HSHSLFLG---SNGALWSAGSNNYGQLGFGDKSSTELRPLI---SLKGIPFSQISAGFWH 190

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
           +  V   G V  WG    G LG G+    +VP +++AL  +   ++  G+  T  ++ DG
Sbjct: 191 SFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAALTLDG 250

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
            V++FG  +   LGH +     G     V TP+ +  L  +   V QI+         HT
Sbjct: 251 GVFTFGSNQFGQLGHGS----SGPEPLPVSTPRKIFEL--MGNEVTQIACGAQ-----HT 299

Query: 343 FALT-ESGKLYAFGAGDKGQLG 363
                ++G +Y FG  +  QLG
Sbjct: 300 VCYVGKTGNVYTFGNNNHSQLG 321



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL   +I+Q A G   ++ +   G +++ G +++G+  +G + +   T  + + 
Sbjct: 119 SPKKIKSLSN-KIVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSS---TELRPLI 174

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SLK I   Q + G + +  ++  G V+ +   ++ +LG   +  D     LL  L ++ V
Sbjct: 175 SLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLG-LGDCVDRNVPVLLKALRSLSV 233

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQ 212
             I AG  +  AL        V++ G    G+LGHGS   E      PR I  F+L+  +
Sbjct: 234 KYICAGELHTAALTLDG---GVFTFGSNQFGQLGHGSSGPEPLPVSTPRKI--FELMGNE 288

Query: 213 PVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGH 245
              +A GA H    VG+ G V T+G   +  LG+
Sbjct: 289 VTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGY 322



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
           V +A G  H   +   G+V  WG      LG  +  C   PK +++L++ K + VA G  
Sbjct: 80  VDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSN-KIVQVACGHS 138

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  +  +G ++S G      LG        G++ +  L P  + SLK +       S  
Sbjct: 139 HSLFLGSNGALWSAGSNNYGQLGF-------GDKSSTELRP--LISLKGI-----PFSQI 184

Query: 334 NSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           ++ +W  H+F +T SG ++ +G  D GQLG+
Sbjct: 185 SAGFW--HSFCVTHSGAVFCWGRNDNGQLGL 213



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+GI   Q +AG   +  ++ +G V+ +G++  G+   G    + V  P L+++L+++ 
Sbjct: 175 SLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNV--PVLLKALRSLS 232

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT---EPNDVEPHPLLGTLENIPVVQI 159
           V     G   TA L+ +G V+TF      +LGH +   EP  V     +  L    V QI
Sbjct: 233 VKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQI 292

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           A G  + +    +     VY+ G     +LG+      KHPR
Sbjct: 293 ACGAQHTVCYVGKTGN--VYTFGNNNHSQLGYIP----KHPR 328



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTSPQLV 95
           P+  ++L+ + +    AG   T  ++  G V+ FG + FG+  +G  G +   V++P+ +
Sbjct: 222 PVLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKI 281

Query: 96  ESLKNIFVVQAAIGNFFTAV-LSREGRVYTFSWGNDARLGHHTEPNDVE--PHPL 147
             L    V Q A G   T   + + G VYTF   N ++LG+  +    E  PHPL
Sbjct: 282 FELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGYIPKHPRSEFVPHPL 336


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 17/274 (6%)

Query: 30  LGREVNGTPL-YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LGR+ N + +    SL+   I+  + G   ++ +SD G +Y++G  S G+   G   ++ 
Sbjct: 66  LGRKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRN 125

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
            T P+ +  L N  ++Q + GNF +  LS +GRV  FSWG +   +LG  ++  +     
Sbjct: 126 FT-PKKITGLFNTKIIQISCGNFHSLALSEDGRV--FSWGQNKCGQLGLGSQIINQATPQ 182

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+ +L+ IP+VQ+ AG     AL+   SG  V++ G    G+LG  S   +   +     
Sbjct: 183 LVKSLKGIPLVQVTAGGSQSFALSM--SG-TVFAWGKNNAGQLGFKSDPMKGTFKPHAVN 239

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L NL    ++ G  H AV+ +DG V T+G   +G LG  +    SVP+ ++     +  
Sbjct: 240 SLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG-QVS 298

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
            VA G Y T        +Y F C    S G  ++
Sbjct: 299 QVACGRYHTL-------LYVFSCNRIVSFGKGSL 325



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 23/189 (12%)

Query: 181 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGW 237
           + CG    G+LG  S         IEQ   L  Q +V ++ G  H+  V  +G + +WG 
Sbjct: 56  LSCGQNPYGQLGRKSNNSS-----IEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGD 110

Query: 238 GRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
           G  G LG GN    +  PK +  L + K I ++ G++ +  +SEDG V+S+G  +   LG
Sbjct: 111 GSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLG 170

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                   G++  N  TPQLV SLK +   +VQ++   S      +FAL+ SG ++A+G 
Sbjct: 171 -------LGSQIINQATPQLVKSLKGI--PLVQVTAGGS-----QSFALSMSGTVFAWGK 216

Query: 357 GDKGQLGIE 365
            + GQLG +
Sbjct: 217 NNAGQLGFK 225



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 28/316 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ-AAIGNFFTAVLSREGRVYTFS 126
           +Y +G + FG+    +QG K V   +  +  ++   VQ  + G   T  L  +G + +  
Sbjct: 1   MYCWGDNCFGQLAL-LQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCG 59

Query: 127 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
                +LG  +  + +E    + +LE   +V I+ G  + +A++ + S   +YS G G  
Sbjct: 60  QNPYGQLGRKSNNSSIEQ---ISSLEAQTIVDISCGTNHSVAVSDEGS---IYSWGDGSE 113

Query: 187 GKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G+LG G+ +     P+ I    L N + + ++ G +H+  + +DGRV +WG  + G LG 
Sbjct: 114 GQLGTGNLSSRNFTPKKITG--LFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGL 171

Query: 246 GNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           G++   ++ P++V++L  +  + V  G   +F +S  G V+++G   +  LG       +
Sbjct: 172 GSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGF------K 225

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +       P  V SL+  N  V  IS         HT  L++ G +Y FG    GQLG 
Sbjct: 226 SDPMKGTFKPHAVNSLR--NLGVAYISCGEE-----HTAVLSKDGSVYTFGDDTHGQLG- 277

Query: 365 ELVNNQTERGNPERVD 380
              N+  +   P++++
Sbjct: 278 --QNSGNQTSVPQKIE 291


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 147/333 (44%), Gaps = 49/333 (14%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+   +L+   I+   +G   ++ +   G V+ +G +S G+   G   T    +P  V  
Sbjct: 102 PVRLAALE--NIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGT--TTDRATPMRVAG 157

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENI 154
           L ++  V A  G+F +  L  +G V+  +WG +   +LG  HT+P          T E +
Sbjct: 158 LDSVVAVAA--GDFHSLALREDGTVW--AWGTNFHGQLGRGHTQPGL--------TPEQV 205

Query: 155 P----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           P    VV +AAG+ + LA+    +   V + G    G+LG G+ T    P  + +   + 
Sbjct: 206 PGLNGVVALAAGFDFTLAVLEDGT---VRAWGSNGSGQLGDGTSTQRLSPVKVSELSGIT 262

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
                V AG +HA  +G+DG V TWG    G LG G     +VP  V  L  VKA  VA+
Sbjct: 263 ----EVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKA--VAS 316

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            D  +  + + G V+++G   S  LG     DG     A   TP  V  L  V   V   
Sbjct: 317 MDSDSLALLDTGAVFAWGANGSGQLG-----DGDTTDRA---TPGPVPGLNAVASVVGGA 368

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     H   L + G L+A+G G  GQLG
Sbjct: 369 Q---------HALVLRKDGTLWAWGGGLSGQLG 392



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 146/330 (44%), Gaps = 41/330 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+  +  AAG   T+ + + G V A+G +  G+   G    +L  SP  V 
Sbjct: 201 TPEQVPGLNGV--VALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRL--SPVKVS 256

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L  I  V+A  G +    L ++G V+T  WG++A  +LG  T  +   P  + G LE +
Sbjct: 257 ELSGITEVRA--GTYHALALGKDGGVWT--WGSNASGQLGDGTWNDRAVPMQVPG-LERV 311

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V          +LA   +G AV++ G    G+LG G  TD   P  +     +     
Sbjct: 312 KAVA----SMDSDSLALLDTG-AVFAWGANGSGQLGDGDTTDRATPGPVPGLNAV----A 362

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            V  GA HA V+ +DG +  WG G  G LGHG  E   VP  V  L  V ++  ATG + 
Sbjct: 363 SVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSM--ATGSFH 420

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +     DG V+++G      LG  + A+    RHA V              RV  +    
Sbjct: 421 SLAALGDGSVWAWGRNTYGQLGDGSTAE----RHAAV--------------RVEGLGGVR 462

Query: 335 SIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
           S+   A H+ A+   G ++A+G    GQLG
Sbjct: 463 SVASAAHHSLAVGMDGTVWAWGRNAAGQLG 492



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 151/344 (43%), Gaps = 41/344 (11%)

Query: 23   RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
            R G+  L     +  P+  R +   R+ + + G   T+++   G V A+G++  G+   G
Sbjct: 737  RFGQLGLGAAGWSAVPVQVRGIG--RVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDG 794

Query: 83   VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPN 140
                +  T P  V  +  +  V + I +     L+ +G V+  +WG +AR  LG  T   
Sbjct: 795  TSTHR--TGPVSVPGVPCVRSVASGIQHSL--ALACDGTVW--AWGANARGQLGDGTTTP 848

Query: 141  DVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
             V P    G +E +  VV +AAG    +AL    S   V+S G    G+LG G+ TD   
Sbjct: 849  RVTP----GLVEGLRGVVALAAGGDASVALRADGS---VWSWGGNASGQLGDGTLTDRAL 901

Query: 200  PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
            P  +E         V VA G  HA  VG+DG +  WG    G LG G       P  V+ 
Sbjct: 902  PAHVEHLS----NAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKG 957

Query: 260  LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
            L  V +  VA G   +  V +DG  +++G   S  L       G G  HA  + P  VTS
Sbjct: 958  LERVAS--VAAGRAFSVAVRDDGTAWAWGTNPSGQL-------GDGTNHARSV-PNQVTS 1007

Query: 320  LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            LK +       +++   +   H  AL+  G ++ +G    GQLG
Sbjct: 1008 LKGIR------AMSAGAH---HVVALSADGTVWTWGDNTLGQLG 1042



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 168/397 (42%), Gaps = 64/397 (16%)

Query: 28   NLLGREVNG----TPLYCRSLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
            N LG+  +G    T ++ R +  +R ++A AAG   T+ +   G   A+G + +G+   G
Sbjct: 1036 NTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDG 1095

Query: 83   VQGTKLVTSPQLVESLKNIFVVQA--AIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE 138
              G +L      +E  K    V+   A G      +S +G V T  WG++   +LG  T 
Sbjct: 1096 KTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMS-DGTVQT--WGDNTFGQLGDGTT 1152

Query: 139  PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
                 P  + G      VV +++G  + LAL    +   V++ G    G+LG G+ T   
Sbjct: 1153 TRRAVPLTVYGLAS---VVAVSSGAWHSLALLSDGT---VWAWGANGFGQLGDGTSTPRT 1206

Query: 199  HPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             P      Q+  L  VV + +G +HA  V  DG V TWG+  +G LG G  E  S+P  V
Sbjct: 1207 RP-----VQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRV 1261

Query: 258  QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG--------------------- 296
            + L  V  + VA GD+ +  +  DG + ++G   S  LG                     
Sbjct: 1262 EGLEGV--VAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVD 1319

Query: 297  ------HNAIADGQG-------NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HT 342
                  H     G G       N    +      T ++ V   V  +S  +++   A HT
Sbjct: 1320 VRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHT 1379

Query: 343  FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            FA+   G ++ +G    GQLG+    N+TE   P RV
Sbjct: 1380 FAVALKGTVWTWGRNSHGQLGLGDNTNRTE---PLRV 1413



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 43/334 (12%)

Query: 50  IQAAAGAGRTMLISDAGQVYAF---GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
           ++ AAG   ++ +S  G V+A+   G    G AE  +QG     +P  + +L+NI  V +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQG----LAPVRLAALENIVSVVS 116

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
             G+  +  L  +G V+T+   +  +LG  T  +   P  + G L++  VV +AAG  + 
Sbjct: 117 --GDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAG-LDS--VVAVAAGDFHS 171

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI-EQFQLLNLQPVVVAAGAWHAAV 225
           LAL    +   V++ G    G+LG G       P L  EQ   LN   V +AAG      
Sbjct: 172 LALREDGT---VWAWGTNFHGQLGRG----HTQPGLTPEQVPGLN-GVVALAAGFDFTLA 223

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           V +DG V  WG    G LG G       P  V  L+ +  +   T  Y    + +DG V+
Sbjct: 224 VLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGT--YHALALGKDGGVW 281

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G   S  LG     DG  N  A    P  V  L    ERV  ++  +S      + AL
Sbjct: 282 TWGSNASGQLG-----DGTWNDRA---VPMQVPGL----ERVKAVASMDS-----DSLAL 324

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            ++G ++A+GA   GQLG     + T+R  P  V
Sbjct: 325 LDTGAVFAWGANGSGQLGD---GDTTDRATPGPV 355



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 149/349 (42%), Gaps = 37/349 (10%)

Query: 27  RNLLGREVNGTPL-YCR--SLQGIRIIQA-AAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
           RN  G+  +GT L   R  ++ G+  + A AAG    + +   G V+A+G ++ G+   G
Sbjct: 485 RNAAGQLGDGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDG 544

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
               +L  +P  V  L  +  V A  G++F+  L  +G V+T+  G + +LG       +
Sbjct: 545 TTVDRL--TPVRVSGLGAVVAVAA--GSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRL 600

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
            P  + G L NI   ++AAG  +  ALA +  G  V++ G    G+LG GS  D   P  
Sbjct: 601 SPVRVEG-LANI--TRVAAGSAH--ALAVRGDGT-VWAWGDNGEGQLGDGSWADRFRPVQ 654

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           +   Q +      V+ G  H+  +  DG V  WG+  YG LG G       P ++  L  
Sbjct: 655 VPGLQGIT----AVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTG 710

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           ++A+H +        +  DG +  +G      LG  A              P  V  + +
Sbjct: 711 IQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAA--------GWSAVPVQVRGIGR 760

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           V+   V           AHT  +   G + A+G    GQLG     ++T
Sbjct: 761 VDRLSVG---------RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT 800



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 143/344 (41%), Gaps = 40/344 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L+  R+   A+    ++ + D G V+A+G +  G  + G   T    +P  V  
Sbjct: 302 PMQVPGLE--RVKAVASMDSDSLALLDTGAVFAWGAN--GSGQLGDGDTTDRATPGPVPG 357

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  +  V    G     VL ++G ++ +  G   +LGH      V P P++       V 
Sbjct: 358 LNAVASVVG--GAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVM---RLAGVT 412

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQLLNLQPVVV 216
            +A G  + LA     S   V++ G    G+LG GS T E+H  + +E    +      V
Sbjct: 413 SMATGSFHSLAALGDGS---VWAWGRNTYGQLGDGS-TAERHAAVRVEGLGGVR----SV 464

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A+ A H+  VG DG V  WG    G LG G     + P  V  L  V A  VA G     
Sbjct: 465 ASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTA--VAAGGSHVL 522

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +  DG V+++G      LG     D         LTP  V+ L  V      +++    
Sbjct: 523 ALRSDGSVWAWGYNALGQLGDGTTVD--------RLTPVRVSGLGAV------VAVAAGS 568

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           Y    + AL   G ++ +G G +GQLG        +R +P RV+
Sbjct: 569 Y---FSMALQSDGTVWTWGEGFEGQLGD---GGGVQRLSPVRVE 606



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 33/329 (10%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            TP     L+G+  +  AAG   ++ +   G V+++G ++ G+   G    + +  P  VE
Sbjct: 851  TPGLVEGLRGV--VALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRAL--PAHVE 906

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L N   V  A+G      +  +G ++ +      +LG       + P  + G LE   V
Sbjct: 907  HLSNAVAV--AVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKG-LER--V 961

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-V 215
              +AAG  +  ++A +  G A ++ G    G+LG G+     H R +   Q+ +L+ +  
Sbjct: 962  ASVAAGRAF--SVAVRDDGTA-WAWGTNPSGQLGDGT----NHARSVPN-QVTSLKGIRA 1013

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYT 274
            ++AGA H   +  DG V TWG    G LG G+     + P+ V  L  V+A  VA G+  
Sbjct: 1014 MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPELRGVEA--VAAGEQF 1071

Query: 275  TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
            T  V  DG   ++G  E   LG     DG+         PQL     ++    ++  +  
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLG-----DGK-------TGPQLTPMAVKIEGPKIRPPVRT 1119

Query: 335  SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               W  H       G +  +G    GQLG
Sbjct: 1120 VRAWGQHAVVQMSDGTVQTWGDNTFGQLG 1148



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 16/252 (6%)

Query: 49   IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
            ++   +G    + +   G V+ +G ++FG+   G   ++ +  P  VE L+ +  V  A 
Sbjct: 1217 VVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSL--PTRVEGLEGVVAV--AG 1272

Query: 109  GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
            G+ ++  L  +G +   +WGN+A  G   +      +  +       VV + AG  + +A
Sbjct: 1273 GDHYSLALHSDGTLS--AWGNNAS-GQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVA 1329

Query: 169  LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAGAWHAAVVG 227
            L    +   V++ G    G+LG G+       RL+ +  + NL  V  V AGA H   V 
Sbjct: 1330 LRGDGT---VWTWGDNAFGQLGDGASGTRM--RLVPR-PVPNLSSVSAVGAGARHTFAVA 1383

Query: 228  QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
              G V TWG   +G LG G+    + P  V+ L+DV    V+ G   +  +  DG V S+
Sbjct: 1384 LKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSW 1441

Query: 288  GCGESASLGHNA 299
            G     SLG  A
Sbjct: 1442 GSSLYGSLGLGA 1453



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 8/147 (5%)

Query: 54   AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
            AGA  T+ +   G V+ +G ++FG+   G  GT++   P+ V +L ++  V A   + F 
Sbjct: 1322 AGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFA 1381

Query: 114  AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
              L  +G V+T+   +  +LG     N  EP   L   E   V  ++ G  + LA+    
Sbjct: 1382 VAL--KGTVWTWGRNSHGQLGLGDNTNRTEP---LRVRELSDVTVVSGGADFSLAMKRDG 1436

Query: 174  SGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            +   V S G  L G LG G+      P
Sbjct: 1437 T---VLSWGSSLYGSLGLGATGHRSSP 1460



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 88/250 (35%), Gaps = 77/250 (30%)

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG--------------AW----- 221
           VGC   G L   ++ +  H    ++  ++   P+ +AAG              AW     
Sbjct: 32  VGCEPSGAL---AKPETPHATRTQRV-VVTAPPMRIAAGTQHSLYLSPGGDVWAWGGNGS 87

Query: 222 --------------------------------HAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
                                           H+  +G DG V TWG    G LG G   
Sbjct: 88  GQLGGAETSLQGLAPVRLAALENIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTT 147

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
             + P  V  L+ V  + VA GD+ +  + EDG V+++G      LG      G      
Sbjct: 148 DRATPMRVAGLDSV--VAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPG------ 199

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
             LTP+ V  L  V                  T A+ E G + A+G+   GQLG      
Sbjct: 200 --LTPEQVPGLNGVVALAAGFDF---------TLAVLEDGTVRAWGSNGSGQLGD---GT 245

Query: 370 QTERGNPERV 379
            T+R +P +V
Sbjct: 246 STQRLSPVKV 255



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 22/229 (9%)

Query: 33   EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
            E    P     L+G+  +  A G   ++ +   G + A+G ++ G+   G   T+     
Sbjct: 1253 ESRSLPTRVEGLEGV--VAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRY---- 1306

Query: 93   QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVE--PHPLL 148
              V       VV    G   T  L  +G V+T  WG++A  +LG       +   P P+ 
Sbjct: 1307 SRVAVKGVDGVVDVRAGATHTVALRGDGTVWT--WGDNAFGQLGDGASGTRMRLVPRPVP 1364

Query: 149  GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
              L ++  V   A + + +AL        V++ G    G+LG G  T+   P  + +   
Sbjct: 1365 -NLSSVSAVGAGARHTFAVALKGT-----VWTWGRNSHGQLGLGDNTNRTEPLRVRELSD 1418

Query: 209  LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            +     VV+ GA  +  + +DG V +WG   YG LG G     S P  V
Sbjct: 1419 VT----VVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQV 1463


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 137/311 (44%), Gaps = 36/311 (11%)

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
           G   T  + +PQ V+ L    + + A G      LS  G VY+     D  +   TEP +
Sbjct: 221 GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS---SEDHAIST-TEPTN 276

Query: 142 VEPHPLL-------GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
           +   P L         L   P++ IA G  + +AL    S   VYS G G  G+LGHG  
Sbjct: 277 MLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALT---SAGEVYSWGSGEDGRLGHGEM 333

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            D   PR I    LL  +   V+ G  H AVV     V T+G GR G LG G+ +C   P
Sbjct: 334 RDRNVPRKI--MALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP 391

Query: 255 KVVQA--LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
           + V        + I V  G   T  +S +G V+S+G       G        G    + L
Sbjct: 392 QEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCG-------LGFCDQDEL 444

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           +P L+  L  ++ R+V ++   +     H+ ALT   ++ ++G G+ GQLG  +V     
Sbjct: 445 SPCLIEKL--LDNRIVDVACGYT-----HSLALTSQHEVLSWGLGEYGQLGRGIVY---- 493

Query: 373 RGNPERVDIDL 383
           + +PE +D  L
Sbjct: 494 QPSPESIDQSL 504



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 15/267 (5%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G  I + A G    + +S AG VY+    S   A    + T ++ +PQLV+
Sbjct: 230 TPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS----SEDHAISTTEPTNMLQTPQLVK 285

Query: 97  ------SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
                 +L    ++  A G   +  L+  G VY++  G D RLGH    +   P  ++  
Sbjct: 286 ELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMAL 345

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           L +  +  ++ G  +   ++ Q     V++ G G  G+LG G       P+ +  +    
Sbjct: 346 LRH-RIEYVSCGGSHTAVVSDQN---LVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRK 401

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVA 269
            + + V  G      +  +GRV +WG    G  G G  ++ E  P +++ L D + + VA
Sbjct: 402 QRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVA 461

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLG 296
            G   +  ++   +V S+G GE   LG
Sbjct: 462 CGYTHSLALTSQHEVLSWGLGEYGQLG 488



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 22/272 (8%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L    II  A GA  ++ ++ AG+VY++G    G   +G    + V  P+ + +L   
Sbjct: 291 KALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNV--PRKIMALLRH 348

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPV 156
            +   + G   TAV+S +  V+TF  G + RLG      H  P +V   P  G      +
Sbjct: 349 RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEV---PTWG-FRKQRI 404

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVV 215
           +++  G+ + +AL+ +     V+S G    G+ G G    DE  P LIE+  LL+ + V 
Sbjct: 405 IKVVCGWNFTIALSLEGR---VFSWGKQSEGQCGLGFCDQDELSPCLIEK--LLDNRIVD 459

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH---VATGD 272
           VA G  H+  +     V +WG G YG LG G     S   + Q+L   +  H   +  G 
Sbjct: 460 VACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGA 519

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIAD 302
           + + + +    +Y++G     +  LGH    D
Sbjct: 520 FHSIITAGSKILYAWGLNSYGACGLGHTLNRD 551



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 18/216 (8%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQ 105
           RI   + G   T ++SD   V+ FG+   G    G+  TK   +PQ V +   +   +++
Sbjct: 349 RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGR--LGLGDTKCHDTPQEVPTWGFRKQRIIK 406

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
              G  FT  LS EGRV  FSWG  +     LG   + +++ P  +   L+N  +V +A 
Sbjct: 407 VVCGWNFTIALSLEGRV--FSWGKQSEGQCGLGF-CDQDELSPCLIEKLLDN-RIVDVAC 462

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ--FQLLNLQPVVVAAG 219
           GY + LAL  Q     V S G G  G+LG G    +  P  I+Q  F      P  +  G
Sbjct: 463 GYTHSLALTSQ---HEVLSWGLGEYGQLGRGI-VYQPSPESIDQSLFACEGGHPQRIYCG 518

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           A+H+ +      +  WG   YG  G G+     +P+
Sbjct: 519 AFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 50/327 (15%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAG---QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
           RS++  R  Q    +GR   +   G   QV+             + G+  + +P+ ++  
Sbjct: 48  RSVEATR--QICCSSGRLAFLERGGAGVQVHQL-----------LPGSDGLRTPKCIKLG 94

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 158
           KN+ +    +G     +LS +G+ + +    D     H     +        L+   ++Q
Sbjct: 95  KNMKIHSMDLGADHMLILSSDGKPFEY----DNYSMKHLRFESI--------LQEKKIIQ 142

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVA 217
           I  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L  +    ++
Sbjct: 143 ITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEH--LAGIPLAQIS 197

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           AG  H+  +   G + +WG   +G LG  + E +  P +++AL++ K   +A G   T +
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTAL 257

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           +++DG +++FG G+   LGHN+          N L P LV  L     RV QI+      
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--AGNRVTQIACGR--- 304

Query: 338 WNAHTFA-LTESGKLYAFGAGDKGQLG 363
           W  HT A +++ GK+++FG+G +GQLG
Sbjct: 305 W--HTLAYVSDLGKVFSFGSGKEGQLG 329



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +          EY     K +    +++
Sbjct: 87  TPKCIKLGKNMKIHSMDLGADHMLILSSDGKPF----------EYDNYSMKHLRFESILQ 136

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  
Sbjct: 137 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTAPQ-IVEHLAG 190

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           IP+ QI+AG  + +AL+   SG  +YS G    G+LG      +  P LIE   L N + 
Sbjct: 191 IPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKV 245

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRW 305

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 306 HTLAYVSDLGKVFSFGSGKEGQLGNGGTRD 335



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  I +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTAPQIVEHLAGIPL 193

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG-HHTEPNDVEPHPLLGTLENIPVVQIA 160
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D     L+  L+N  V  +A
Sbjct: 194 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLDHTESKD--SPSLIEALDNQKVEFLA 249

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+ +  L   +   +A G 
Sbjct: 250 CGGSHT-ALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE--LAGNRVTQIACGR 304

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVK 264
           WH  A V   G+V ++G G+ G LG+G   ++   +P  V +  D+K
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G +    + P++V+ L  +    ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGE 200

Query: 273 YTTFVVSEDGDVYSFGCGESASLG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G++YS+G  E   LG  H    D          +P L+ +L   N++V  +
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLDHTESKD----------SPSLIEALD--NQKVEFL 248

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     HT  LT+ G L+ FGAG  GQLG     N+
Sbjct: 249 ACGGS-----HTALLTQDGLLFTFGAGKHGQLGHNSTQNE 283



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 25/156 (16%)

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N++   +  GA H  ++  DG+        Y      +   ES+      L + K I + 
Sbjct: 96  NMKIHSMDLGADHMLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQIT 144

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            GDY +  +S+ G+++++G      LG        G +  +   PQ+V  L  +   + Q
Sbjct: 145 CGDYHSLALSKGGELFAWGQNLHGQLG-------VGRKFPSTTAPQIVEHLAGIP--LAQ 195

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           IS        AH+ AL+ SG +Y++G  + GQLG++
Sbjct: 196 ISAGE-----AHSMALSMSGNIYSWGKNEFGQLGLD 226



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 57/173 (32%)

Query: 30  LGREVNGT--PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           +GR+   T  P     L GI + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+
Sbjct: 172 VGRKFPSTTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQL--GLDHTE 229

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG--------------------------- 120
              SP L+E+L N  V   A G   TA+L+++G                           
Sbjct: 230 SKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV 289

Query: 121 --------------------------RVYTFSWGNDARLGHHTEPNDVEPHPL 147
                                     +V++F  G + +LG+    + + P P+
Sbjct: 290 AELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 27/309 (8%)

Query: 43   SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            +LQG    +++ +    G +M ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 2700 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 2757

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ- 158
               VVQ + G   +AV++ +G+++TF  G+  RLG     N   P  +   LE   + Q 
Sbjct: 2758 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQA 2816

Query: 159  ------IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
                  +A G  + LA++    G  V++ G G  GKLG G+ T +  P+ ++    + ++
Sbjct: 2817 WNKSYSVACGLNHTLAVST--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK 2874

Query: 213  PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
             V  A G   +  + +DG V T+G  R   L  G     + P+ V  L  V    VA G 
Sbjct: 2875 KV--ACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGA 2932

Query: 273  YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQIS 331
              T  ++  GDVY++G      LG           H N V  P LVT L+  N R +   
Sbjct: 2933 EHTLALASTGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTVLQGKNIRQISAG 2983

Query: 332  LTNSIYWNA 340
              +S  W A
Sbjct: 2984 RCHSAAWTA 2992



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 37/216 (17%)

Query: 181  VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
            + CG G  G+LG G+  D     +I   Q   +  +V + G+  H+  + + G V +WG 
Sbjct: 2674 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2733

Query: 238  GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G YG LGHGN + +  P+ ++AL   + + ++ G   + VV+ DG +++FG G+   L  
Sbjct: 2734 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 2791

Query: 298  NAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNA---------HTFALT 346
                 G GN  +N   P+ VT+L+  Q+ +            WN          HT A++
Sbjct: 2792 -----GLGNT-SNKKLPERVTALEGYQIGQ-----------AWNKSYSVACGLNHTLAVS 2834

Query: 347  ESGKL-YAFGAGDKGQLGIELVNNQTERGNPERVDI 381
              G + +AFG GD G+LG+    N T + +P++VD+
Sbjct: 2835 TDGSMVWAFGDGDYGKLGL---GNSTAKSSPQKVDV 2867



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 30/331 (9%)

Query: 51   QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
            Q   G   T +I   G V A G+ S+G    G      V +  ++ +L+   V Q     
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 2713

Query: 110  --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
              +  +  L+  G V+++  G+  +LGH        P  +   L+   VVQ++ G+ +  
Sbjct: 2714 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 2771

Query: 168  ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-----QPVVVAAGAWH 222
              A   S   +++ G G  G+LG G+ +++K P  +   +   +     +   VA G  H
Sbjct: 2772 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNH 2829

Query: 223  AAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
               V  DG  V  +G G YG LG GN   +S P+ V  L  +    VA G   +  +++D
Sbjct: 2830 TLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 2889

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            G VY+F  G+   +G   + +G+   H     PQ V  L  V    V +          H
Sbjct: 2890 GHVYTF--GQDRLIG---LPEGRARNHNR---PQQVPVLAGVVIEDVAVG-------AEH 2934

Query: 342  TFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            T AL  +G +YA+G+  +GQLG+   N+  E
Sbjct: 2935 TLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2965



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
            GK  L       +P     L GI I + A G   ++ ++  G VY FG+D       G  
Sbjct: 2849 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 2908

Query: 85   GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
                   PQ V  L  + +   A+G   T  L+  G VY  +WG+++     LGH    N
Sbjct: 2909 RNH--NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVY--AWGSNSEGQLGLGH---TN 2961

Query: 141  DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             V    L+  L+   + QI+AG C+  A    P
Sbjct: 2962 HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPP 2994



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 16/242 (6%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQG  ++Q + G   + +++  G+++ FG   +G    G    K +  P+ V +
Sbjct: 2750 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 2807

Query: 98   LKNIFVVQA-------AIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            L+   + QA       A G   T  +S +G  V+ F  G+  +LG         P   + 
Sbjct: 2808 LEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQK-VD 2866

Query: 150  TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
             L  I + ++A G  + +AL        VY+ G      L  G   +   P+ +     +
Sbjct: 2867 VLCGIGIKKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGV 2923

Query: 210  NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
             ++ V V  GA H   +   G V  WG    G LG G+      P +V  L       ++
Sbjct: 2924 VIEDVAV--GAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQIS 2981

Query: 270  TG 271
             G
Sbjct: 2982 AG 2983


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 20/302 (6%)

Query: 43  SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
           +LQG  +IQ A   G    ++ ++D+G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 566 ALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALR 623

Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
              VV  A G   +AV++ +G+++TF  G+  RLGH    N   P  +   LE   + Q+
Sbjct: 624 GEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQV 682

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  + L L+    G  V++ G G  GKLG GS T +  P+ I+    +  +   +  G
Sbjct: 683 ACGLNHTLVLSA--DGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKK--ICCG 738

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
              + V+  DGRV ++G  R      G       P+ +QAL       V  G      ++
Sbjct: 739 TQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALT 798

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANV-LTPQLVTSLKQVNERVVQISLTNSIYW 338
             G+V+ +G      LG           H+N    P ++  LK  N R +     +S  W
Sbjct: 799 STGEVWGWGNNVDGQLGLG---------HSNAQREPCVIPDLKGKNIRQISAGRNHSAAW 849

Query: 339 NA 340
            A
Sbjct: 850 TA 851



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)

Query: 181 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
           + CG G  G+LG G+  D      I   Q   +  +  + G+  H+  +   G V +WG 
Sbjct: 540 LACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGD 599

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           G YG LGHGN + +  P+ ++AL   + +++A G   + VV+ DG +++FG G+   LGH
Sbjct: 600 GDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659

Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGA 356
                  GN  AN  TP+ VT+L++     V   L        HT  L+  G  ++AFG 
Sbjct: 660 -------GN-SANKKTPERVTALEKHAIGQVACGLN-------HTLVLSADGNTVWAFGD 704

Query: 357 GDKGQLGIELVNNQTERGNPERVDI 381
           GD G+LG+    + T + +P+ +D+
Sbjct: 705 GDYGKLGL---GSCTAKTSPQAIDV 726



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 143/327 (43%), Gaps = 53/327 (16%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           V  P + +SL +    Q   G   T V+   G +     G+  RLG     +     P+ 
Sbjct: 508 VNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPI- 564

Query: 149 GTLENIPVVQIAA-----GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
             L+   V+QIA      G+    +LA   SG  V+S G G  GKLGHG+   ++ PR I
Sbjct: 565 SALQGYVVIQIATSRGSDGH----SLALTDSG-EVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           E   L   + V +A G  H+AVV  DG++ T+G G YG LGHGN   +  P+ V AL   
Sbjct: 620 EA--LRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677

Query: 264 KAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHNAIADGQGNRHANVLT--------- 313
               VA G   T V+S DG+ V++FG G+   LG  +       +  +VL          
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICC 737

Query: 314 ----PQLVTSLKQV----NERVV--------------QISLTNSIYWN------AHTFAL 345
                 ++T+  +V     ER+               QI    S + +       H  AL
Sbjct: 738 GTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLAL 797

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTE 372
           T +G+++ +G    GQLG+   N Q E
Sbjct: 798 TSTGEVWGWGNNVDGQLGLGHSNAQRE 824


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 144/322 (44%), Gaps = 30/322 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP      +   +++AA GA  T+ ++  G+VY+ G + +G+  +     +    PQLV 
Sbjct: 24  TPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKR----PQLVS 79

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            L    ++  A G   +  LSR G V  FSWG+D   +LGH           L+ +L   
Sbjct: 80  GLDAYSIINVACGEMHSLALSRWGEV--FSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKY 137

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQP 213
            VVQIAAG  + +AL    +   ++  G    G+LG G+ T  E  P  +    L  +  
Sbjct: 138 QVVQIAAGQRHSVALT---NAGEIFVWGANDFGQLGLGTITPYESTPTTV--CSLSGIPF 192

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            ++A GA H   V + G V  WG    G LG  +   +  P  ++ L + +   ++ GD 
Sbjct: 193 ALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDE 252

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            +  ++ DG V+S G G    LGH           +N + P+ V  L  +   + QIS  
Sbjct: 253 FSTFLTLDGGVFSCGAGMYGQLGHGGT--------SNEILPRQVLEL--MGSTITQISCG 302

Query: 334 NSIYWNAHTFALTES-GKLYAF 354
                  H+ A   S G++Y++
Sbjct: 303 RQ-----HSLAFVPSRGRVYSY 319



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 27/299 (9%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           ++ +G    GE   G    + V +P+ ++  +   V++AA+G   T  L+++G+VY+   
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LG H +P    P  L+  L+   ++ +A G  + LAL+       V+S G    G
Sbjct: 61  NDYGQLG-HDQPRK-RPQ-LVSGLDAYSIINVACGEMHSLALS---RWGEVFSWGSDNYG 114

Query: 188 KLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LGH    T +  P+LI+   L   Q V +AAG  H+  +   G +  WG   +G LG G
Sbjct: 115 QLGHQLGGTLQIVPKLIK--SLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172

Query: 247 N-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                ES P  V +L+ +    +A G   TF VS+ G V+ +G   +  LG N       
Sbjct: 173 TITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLN------- 225

Query: 306 NRHANVLTPQLVTSLKQV-NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
               + ++ +  T L+ + N RV  IS  +       TF LT  G +++ GAG  GQLG
Sbjct: 226 ----DTVSKKFPTQLRTLRNSRVRFISCGDEF----STF-LTLDGGVFSCGAGMYGQLG 275



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 16/235 (6%)

Query: 30  LGREVNGT----PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           LG ++ GT    P   +SL   +++Q AAG   ++ +++AG+++ +G + FG+   G   
Sbjct: 116 LGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTI- 174

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN--DARLGHHTEPNDVE 143
           T   ++P  V SL  I     A G   T  +S+ G V  F WG   + +LG +   +   
Sbjct: 175 TPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAV--FGWGKNINGQLGLNDTVSKKF 232

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P   L TL N  V  I+ G  +   L        V+S G G+ G+LGHG  ++E  PR +
Sbjct: 233 PTQ-LRTLRNSRVRFISCGDEFSTFLTLDG---GVFSCGAGMYGQLGHGGTSNEILPRQV 288

Query: 204 EQFQLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
              +L+      ++ G  H+ A V   GRV ++G G  G LG       S P+VV
Sbjct: 289 --LELMGSTITQISCGRQHSLAFVPSRGRVYSYGLGGAGQLGLRKPSNASTPQVV 341


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 35/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+ ++  KN+ +     G     +LS +G+ + +    D  + H    +          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSES---------I 133

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L 
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEH--LA 188

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++AG  H+  +   G + +WG   +G LG G+ E +  P +++AL++ K   +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + ++++DG +++FG G+   LGHN+          N L P LV  L  V  RV Q
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVTQ 298

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+      W  HT A +++ GK+++FG+G  GQLG
Sbjct: 299 IACGR---W--HTLAYVSDFGKVFSFGSGKDGQLG 328



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 26/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +        E +Y +   K + S  +++
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQ 135

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG   T P+   P  ++  L  
Sbjct: 136 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAG 189

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +P+ QI+AG  + +AL+   SG  +YS G    G+LG G    +  P LIE   L N + 
Sbjct: 190 VPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKV 244

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H+A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRW 304

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 305 HTLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+   SP L+E
Sbjct: 180 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQL--GLGHTESKDSPSLIE 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 238 ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRV 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   D+  P
Sbjct: 297 TQIACGRWHTLAYVSDFG--KVFSFGSGKDGQLGNGGTLDQLIP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 14/220 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPSTTTPQIVEHLAGVPL 192

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIA 160
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D     L+  L+N  V  +A
Sbjct: 193 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKDSP--SLIEALDNQKVEFLA 248

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+   +L+  +   +A G 
Sbjct: 249 CGGSH-SALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGNRVTQIACGR 303

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           WH  A V   G+V ++G G+ G LG+G    + +P  V+ 
Sbjct: 304 WHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G      + P++V+ L  V    ++ G+
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G++YS+G  E     LGH    D          +P L+ +L   N++V  +
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------SPSLIEALD--NQKVEFL 247

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     H+  LT+ G L+ FGAG  GQLG     N+
Sbjct: 248 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 282



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 39/202 (19%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + C P  +AV   G G G ++        G+RT    P+ I+  +  N++   V  GA H
Sbjct: 56  ICCSPRRLAVLERG-GAGVQVHQVLAGSGGART----PKCIKLGK--NMKIHSVDQGADH 108

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             ++  DG+   + +     + H   E          L + K I +  GDY +  +S+ G
Sbjct: 109 MLILSSDGKPFEYDYS----MKHLRSE--------SILQEKKIIQITCGDYHSLALSKGG 156

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           +++++G      LG        G    +  TPQ+V  L  V   + QIS        AH+
Sbjct: 157 ELFAWGQNLHGQLG-------VGRTFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 202

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
            AL+ SG +Y++G  + GQLG+
Sbjct: 203 MALSMSGNIYSWGKNEFGQLGL 224


>gi|340370015|ref|XP_003383542.1| PREDICTED: regulator of chromosome condensation-like [Amphimedon
           queenslandica]
          Length = 440

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 21/250 (8%)

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIE 204
           P+ G L+   ++Q+  G  + +AL     G  V++ GC   G LG   S TDE  P +++
Sbjct: 65  PVGGVLKGKKILQVVCGGIHTVALL---DGGEVFTWGCNDEGALGRSVSTTDEYTPGVVK 121

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY--GCLGHGNEECESVPKVVQALND 262
           + +  N+    V+AG  H A +  +G V  WG  R   G LG  N + E  P++V +   
Sbjct: 122 KLKGFNI--TQVSAGDCHTAALTDNGHVYCWGVFRDADGPLGLVNSKPEFEPELVYSSAF 179

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNRHAN-VLTPQLVTS 319
            KAI V +G     +++E GD+YSFGCG+S  LG      +   G R    +L PQ+V  
Sbjct: 180 NKAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFSTRGGRRGIGYLLAPQIVRF 239

Query: 320 LKQVNERVVQISLTNS-----IYWNAH-TFAL-TESGKLYAFGAGDKGQLGIELVNNQTE 372
            K+      +   T S     +Y   H +FA+ +E  ++Y +G   +GQLG+    +Q  
Sbjct: 240 PKKGRRLTGKAGATKSFKISDVYAGEHCSFAIGSEDRQIYVWGLNHRGQLGL---GDQES 296

Query: 373 RGNPERVDID 382
           R  PE+V  D
Sbjct: 297 RFVPEKVPED 306



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 41/302 (13%)

Query: 30  LGREVNGTPLYC----RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG 85
           LGR V+ T  Y     + L+G  I Q +AG   T  ++D G VY +G     +   G+  
Sbjct: 105 LGRSVSTTDEYTPGVVKKLKGFNITQVSAGDCHTAALTDNGHVYCWGVFRDADGPLGLVN 164

Query: 86  TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE------- 138
           +K    P+LV S      ++   G+    +L+  G +Y+F  G+  +LG   E       
Sbjct: 165 SKPEFEPELVYSSAFNKAIKVTSGSNHIVILTEHGDIYSFGCGDSGQLGRVPECFSTRGG 224

Query: 139 ---------PNDVE-PHP------LLGTLENIPVVQIAAG-YCYLLALACQPSGMAVYSV 181
                    P  V  P          G  ++  +  + AG +C   + A       +Y  
Sbjct: 225 RRGIGYLLAPQIVRFPKKGRRLTGKAGATKSFKISDVYAGEHC---SFAIGSEDRQIYVW 281

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNL-------QPVVVAAGAWHAAVVGQDGRVCT 234
           G    G+LG G +     P  + +  L +        + +++A G  H+ V   DG + +
Sbjct: 282 GLNHRGQLGLGDQESRFVPEKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVC-NDGHLYS 340

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
            G   YG LG    E  S P  +  ++DV  I  A G   +F V++DG V+S+G G +  
Sbjct: 341 MGANEYGQLGLKQIEMTSKPTKLSGISDVTDI--ACGGRCSFAVTKDGKVFSWGIGSNYQ 398

Query: 295 LG 296
           LG
Sbjct: 399 LG 400



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 69/373 (18%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L+G +I+Q   G   T+ + D G+V+ +G +  G     V  T   T P +V+ LK   +
Sbjct: 70  LKGKKILQVVCGGIHTVALLDGGEVFTWGCNDEGALGRSVSTTDEYT-PGVVKKLKGFNI 128

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
            Q + G+  TA L+  G VY   WG     D  LG      + EP  +  +  N   +++
Sbjct: 129 TQVSAGDCHTAALTDNGHVYC--WGVFRDADGPLGLVNSKPEFEPELVYSSAFN-KAIKV 185

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS---------------------RTDEK 198
            +G  +++ L        +YS GCG  G+LG                        R  +K
Sbjct: 186 TSGSNHIVILTEHGD---IYSFGCGDSGQLGRVPECFSTRGGRRGIGYLLAPQIVRFPKK 242

Query: 199 HPRLI------EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
             RL       + F++ +    V A      A+  +D ++  WG    G LG G++E   
Sbjct: 243 GRRLTGKAGATKSFKISD----VYAGEHCSFAIGSEDRQIYVWGLNHRGQLGLGDQESRF 298

Query: 253 VPKVV---------QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           VP+ V         ++    K + +A G   + V + DG +YS G  E   LG   I   
Sbjct: 299 VPEKVPEDWLWDWAKSSKQDKQLLIAGGGSHSLVCN-DGHLYSMGANEYGQLGLKQIE-- 355

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                     P  ++ +  V         T+       +FA+T+ GK++++G G   QLG
Sbjct: 356 ------MTSKPTKLSGISDV---------TDIACGGRCSFAVTKDGKVFSWGIGSNYQLG 400

Query: 364 IELVNNQTERGNP 376
             L  +      P
Sbjct: 401 CGLDEDDVFEPTP 413



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
           AG G   L+ + G +Y+ G + +G+   G++  ++ + P  +  + +  V   A G   +
Sbjct: 324 AGGGSHSLVCNDGHLYSMGANEYGQ--LGLKQIEMTSKPTKLSGISD--VTDIACGGRCS 379

Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDV-EPHPLLGT-LENIPVVQIAAGYCYLL 167
             ++++G+V+++  G++ +LG   + +DV EP P++G  +EN+  V     +  LL
Sbjct: 380 FAVTKDGKVFSWGIGSNYQLGCGLDEDDVFEPTPMVGKHVENVLKVSSGGQHTSLL 435


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 35/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           +P+ ++  KN+ +     G     +LS +G+ + +    D  + H    +          
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSES---------I 133

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L 
Sbjct: 134 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEH--LA 188

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++AG  H+  +   G + +WG   +G LG G+ E +  P +++AL++ K   +A
Sbjct: 189 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA 248

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + ++++DG +++FG G+   LGHN+          N L P LV  L  V  RV Q
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVTQ 298

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+      W  HT A +++ GK+++FG+G  GQLG
Sbjct: 299 IACGR---W--HTLAYVSDFGKVFSFGSGKDGQLG 328



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 26/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +        E +Y +   K + S  +++
Sbjct: 87  TPKCIKLGKNMKIHSVDQGADHMLILSSDGKPF--------EYDYSM---KHLRSESILQ 135

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG   T P+   P  ++  L  
Sbjct: 136 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRTFPSTTTPQ-IVEHLAG 189

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +P+ QI+AG  + +AL+   SG  +YS G    G+LG G    +  P LIE   L N + 
Sbjct: 190 VPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKV 244

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H+A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRW 304

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 305 HTLAYVSDFGKVFSFGSGKDGQLGNGGTLD 334



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+   SP L+E
Sbjct: 180 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQL--GLGHTESKDSPSLIE 237

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 238 ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRV 296

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   D+  P
Sbjct: 297 TQIACGRWHTLAYVSDFG--KVFSFGSGKDGQLGNGGTLDQLIP 338



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 14/220 (6%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 134 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RTFPSTTTPQIVEHLAGVPL 192

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIA 160
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D     L+  L+N  V  +A
Sbjct: 193 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKDSP--SLIEALDNQKVEFLA 248

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+   +L+  +   +A G 
Sbjct: 249 CGGSH-SALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGNRVTQIACGR 303

Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           WH  A V   G+V ++G G+ G LG+G    + +P  V+ 
Sbjct: 304 WHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G      + P++V+ L  V    ++ G+
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGE 199

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G++YS+G  E     LGH    D          +P L+ +L   N++V  +
Sbjct: 200 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------SPSLIEALD--NQKVEFL 247

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     H+  LT+ G L+ FGAG  GQLG     N+
Sbjct: 248 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 282



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 39/202 (19%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
           + C P  +AV   G G G ++        G+RT    P+ I+  +  N++   V  GA H
Sbjct: 56  ICCSPRRLAVLERG-GAGVQVHQVLAGSGGART----PKCIKLGK--NMKIHSVDQGADH 108

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
             ++  DG+   + +     + H   E          L + K I +  GDY +  +S+ G
Sbjct: 109 MLILSSDGKPFEYDYS----MKHLRSE--------SILQEKKIIQITCGDYHSLALSKGG 156

Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
           +++++G      LG        G    +  TPQ+V  L  V   + QIS        AH+
Sbjct: 157 ELFAWGQNLHGQLG-------VGRTFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 202

Query: 343 FALTESGKLYAFGAGDKGQLGI 364
            AL+ SG +Y++G  + GQLG+
Sbjct: 203 MALSMSGNIYSWGKNEFGQLGL 224


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 142/320 (44%), Gaps = 52/320 (16%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           + + G ++ FGK  F E          ++S   +   +N  +   A G+  TA+++  GR
Sbjct: 8   VPETGAIFTFGKSKFAEN---------ISSKFWI---RNDRICAVACGDEHTALVTENGR 55

Query: 122 VYTF---SWGNDARLGHH---TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSG 175
           +YTF    WG    LGH    ++P+ V+      +L++     +A G  + L        
Sbjct: 56  LYTFGSNDWGQ-LGLGHTKTASKPSCVK------SLKHEKAKLVACGRSHTLIAT---GD 105

Query: 176 MAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
             VY  G G  G+LG G  T E   P L++     + + + V+ G +H AVV +DG + T
Sbjct: 106 GKVYVWGGGSEGQLGLGEDTTECTEPTLLD----FDSKAISVSCGYYHTAVVTEDGNLYT 161

Query: 235 WGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
           +G   YG LG  N + +S   P+ V  + +     V  G +TT  ++E G VY+FG G S
Sbjct: 162 FGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTT-AIAESGAVYTFGNGAS 220

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH       GN      TP  V       ER       ++      T  +T  G LY
Sbjct: 221 GQLGH-------GNSLLESPTPHRV-------ERFRDADCKHASCGENFTAVITGKGHLY 266

Query: 353 AFGAGDKGQLGI--ELVNNQ 370
            FG G  G+LG+  E   NQ
Sbjct: 267 TFGDGRHGKLGLGDESFTNQ 286



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 21/260 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           ++  RI   A G   T L+++ G++Y FG + +G+   G+  TK  + P  V+SLK+   
Sbjct: 32  IRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQ--LGLGHTKTASKPSCVKSLKHEKA 89

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
              A G   T + + +G+VY +  G++ +LG   +  +     LL    +   + ++ GY
Sbjct: 90  KLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF--DSKAISVSCGY 147

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLG------HGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            Y  A+  +   +  Y+ G    GKLG        S T +K   + E+ +        V 
Sbjct: 148 -YHTAVVTEDGNL--YTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKF-------VV 197

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTF 276
            G  H   + + G V T+G G  G LGHGN   ES  P  V+   D    H + G+  T 
Sbjct: 198 CGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTA 257

Query: 277 VVSEDGDVYSFGCGESASLG 296
           V++  G +Y+FG G    LG
Sbjct: 258 VITGKGHLYTFGDGRHGKLG 277



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           +Y+ G    G+LG G       P  ++   L + +  +VA G  H  +   DG+V  WG 
Sbjct: 56  LYTFGSNDWGQLGLGHTKTASKPSCVKS--LKHEKAKLVACGRSHTLIATGDGKVYVWGG 113

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG- 296
           G  G LG G +  E     +    D KAI V+ G Y T VV+EDG++Y+FG  E   LG 
Sbjct: 114 GSEGQLGLGEDTTECTEPTLLDF-DSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGL 172

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
           +N+  D          TPQ VT +K+  + VV            HT A+ ESG +Y FG 
Sbjct: 173 NNSDLDSSD-------TPQKVTGIKEKVKFVV--------CGGGHTTAIAESGAVYTFGN 217

Query: 357 GDKGQLGIELVNNQTERGNPERVD 380
           G  GQLG    N+  E   P RV+
Sbjct: 218 GASGQLG--HGNSLLESPTPHRVE 239



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  +    A G   T++ +  G+VY +G  S G+   G + T   T P L++ 
Sbjct: 78  PSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLG-EDTTECTEPTLLDF 136

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE--PHPLLGTLENIP 155
             +   +  + G + TAV++ +G +YTF      +LG +    D    P  + G  E + 
Sbjct: 137 --DSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVK 194

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPV 214
            V    G+   +A +      AVY+ G G  G+LGHG S  +   P  +E+F+  + +  
Sbjct: 195 FVVCGGGHTTAIAES-----GAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCK-- 247

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
             + G    AV+   G + T+G GR+G LG G+E
Sbjct: 248 HASCGENFTAVITGKGHLYTFGDGRHGKLGLGDE 281


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 38/329 (11%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I++ A G+  ++ +   G V+ +G +++G+   G      V +P  +  +  +  V A +
Sbjct: 501 IVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTT--TQVVTPTQLPGMSGVIDVAAGV 558

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
            +  T  LS +G V  + +    +LG+ T  N + P  +    E   V  I+AG  + +A
Sbjct: 559 NH--TVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVP---ELDGVTAISAGSTHTVA 613

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 227
           L    +   V++ G  L G+LG G+ T    P      Q+ +L+ VV +AAG +H   V 
Sbjct: 614 LKADGT---VWAWGSNLYGQLGDGTFTHRSSP-----VQVPSLENVVSIAAGHFHTVAVK 665

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            DG +  WG+G  G LG G    +SVP  V  L    A+ +A G Y T  +  +G V+++
Sbjct: 666 GDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG--HAVAIAAGGYHTVALLANGQVWTW 723

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G   S  LG   I      R++ VL P L             I+L    Y    T  L  
Sbjct: 724 GYNSSGQLGDATIIQ----RYSPVLVPGLTNV----------IALAAGGY---TTAVLKR 766

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERGNP 376
            G ++AFG    GQLG       T R +P
Sbjct: 767 DGTVWAFGYNPNGQLGD---GTTTSRSSP 792



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 41/330 (12%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           + ++  AG   T+     G +YA+G D+F    YG  GT   TS  +   +    V    
Sbjct: 396 QAVEIDAGGYHTLARRQDGTLYAWG-DNF----YGALGTGNTTSSSVPVQVPLSGVRWFG 450

Query: 108 IGNFFTAVLSRE---GRVYT-FSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            G +++    ++    +V+T F+WG++    LG  T      P  ++ +     +V+ A 
Sbjct: 451 AGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVS----GIVKTAG 506

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + +AL    +G AV++ G    G+LG+G+ T    P  +     +    + VAAG  
Sbjct: 507 GSAHSVALG---AGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSGV----IDVAAGVN 559

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H   +  DG V  WG+  YG LG+G    +  P+ V  L+ V AI  + G   T  +  D
Sbjct: 560 HTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKAD 617

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G V+++G      LG         +R + V  P L        E VV I+       + H
Sbjct: 618 GTVWAWGSNLYGQLGDGTFT----HRSSPVQVPSL--------ENVVSIAAG-----HFH 660

Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           T A+   G L+ +G G +GQLG+    NQ+
Sbjct: 661 TVAVKGDGTLWVWGYGPQGQLGLGTTTNQS 690



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 22/267 (8%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           R     P   R L   +++ A+AGA  ++ +++ G V+ +G +++G+   G    + V  
Sbjct: 182 RTQRNAPTRVRGLN--QVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAV-- 237

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLG 149
           P  V  + ++  V AA     T  L  +G V+T+   +   LG  T  + + P   P L 
Sbjct: 238 PVQVPGMSDVVAVAAA--GSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLS 295

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
            + N     IAAG  + LA+    S    +S G    G+LG G+  +   P L+     +
Sbjct: 296 GVTN-----IAAGLWHTLAVKKDGS---AWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGV 347

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
                 ++ G  H   +  DG    WG+   G LG+G     S+P  V AL   +A+ + 
Sbjct: 348 R----ALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAAL--TQAVEID 401

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLG 296
            G Y T    +DG +Y++G     +LG
Sbjct: 402 AGGYHTLARRQDGTLYAWGDNFYGALG 428



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 154/370 (41%), Gaps = 53/370 (14%)

Query: 19  IINERNGKRNLLG--REV-NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 75
           +I + NG R   G  REV      +C S+        + G   T+ +   G ++A+G + 
Sbjct: 122 MIIDSNGNRAKCGITREVLRNFVQFCPSV--------SPGVYHTLEVKSGGSLWAWGNNP 173

Query: 76  FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RL 133
            G+   G +  +   +P  V  L    VV A+ G   +  ++ +G V+T  WG++A  +L
Sbjct: 174 SGQLGNGQRTQR--NAPTRVRGLNQ--VVSASAGAEHSVAVTEDGSVWT--WGSNAYGQL 227

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           G  T      P  + G  +   VV +AA     +AL    +   V++ G    G+LG G+
Sbjct: 228 GDGTNTLRAVPVQVPGMSD---VVAVAAAGSRTVALKADGT---VWTWGINSSGELGDGT 281

Query: 194 RTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
            T    P      Q+ NL  V  +AAG WH   V +DG   +WG   YG LG G      
Sbjct: 282 TTHSLLP-----IQVPNLSGVTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRL 336

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            P +V  L  V+A+  + G   T  +  DG  + +G   +  LG+            N  
Sbjct: 337 RPVLVAGLTGVRAL--SGGVVHTVALKWDGTAWGWGYNSAGQLGNGTT--------TNSS 386

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
            P  V +L Q       + +    Y   HT A  + G LYA+G    G LG     N T 
Sbjct: 387 IPVQVAALTQA------VEIDAGGY---HTLARRQDGTLYAWGDNFYGALG---TGNTTS 434

Query: 373 RGNPERVDID 382
              P +V + 
Sbjct: 435 SSVPVQVPLS 444



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 16/218 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+  I  +AG+  T+ +   G V+A+G + +G+   G    +  +SP  V 
Sbjct: 591 TPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHR--SSPVQVP 646

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL+N  VV  A G+F T  +  +G ++ + +G   +LG  T  N   P  + G       
Sbjct: 647 SLEN--VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLGH---A 701

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IAAG  + +AL        V++ G    G+LG  +      P L+    L N+  + +
Sbjct: 702 VAIAAGGYHTVALLANGQ---VWTWGYNSSGQLGDATIIQRYSPVLVPG--LTNV--IAL 754

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
           AAG +  AV+ +DG V  +G+   G LG G     S P
Sbjct: 755 AAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSP 792



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 16/162 (9%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           +  AAG   T+ +   GQV+ +G +S G+   G        SP LV  L N+  + A  G
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQ--LGDATIIQRYSPVLVPGLTNVIALAA--G 757

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
            + TAVL R+G V+ F +  + +LG  T  +   P     TL N  VV +++G  +++ L
Sbjct: 758 GYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSP---TATLMN-SVVDLSSGVNHMMGL 813

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
                   V + G    G+LG G+ T    P      Q+ NL
Sbjct: 814 RKD---AWVRACGYNSAGQLGDGTTTQRPTP-----VQVTNL 847


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 22/215 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G   D    P+++E    +
Sbjct: 33  LQEKNIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGV 89

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L    ++AG  H+  +   G + +WG   +G LG G+ + +  P +++AL + K   +A
Sbjct: 90  PL--AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLA 147

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T ++++DG V++FG G+   LGHN+          N L P LVT L     RV Q
Sbjct: 148 CGGSHTALLTKDGLVFTFGAGKYGQLGHNST--------QNELRPCLVTKL--AGNRVTQ 197

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           ++         HT A +++ GK+++FG+G++GQLG
Sbjct: 198 VACGRQ-----HTLAYVSDLGKVFSFGSGEEGQLG 227



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L G+ + Q +AG   +M +S +G +Y++G++ FG+   G+  T     P L+E+
Sbjct: 80  PQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQL--GLGHTDDKDFPSLIEA 137

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+N  V   A G   TA+L+++G V+TF  G   +LGH++  N++ P  L+  L    V 
Sbjct: 138 LENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP-CLVTKLAGNRVT 196

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           Q+A G  + LA         V+S G G  G+LG+G   ++  P
Sbjct: 197 QVACGRQHTLAYVSDLG--KVFSFGSGEEGQLGNGGTHNQLIP 237



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 10/213 (4%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 33  LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-KIFDSTTAPQIVEHLSGVPL 91

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIAAG 162
            Q + G   +  LS  G +Y++   +  +LG  HT+  D     L+  LEN  V  +A G
Sbjct: 92  AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFP--SLIEALENQKVEFLACG 149

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
             +   L     G+ V++ G G  G+LGH S  +E  P L+   +L   +   VA G  H
Sbjct: 150 GSHTALLT--KDGL-VFTFGAGKYGQLGHNSTQNELRPCLVT--KLAGNRVTQVACGRQH 204

Query: 223 A-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             A V   G+V ++G G  G LG+G    + +P
Sbjct: 205 TLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIP 237



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L+  ++   A G   T L++  G V+ FG   +G+   G   T+    P LV  
Sbjct: 132 PSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQL--GHNSTQNELRPCLVTK 189

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           L    V Q A G   T A +S  G+V++F  G + +LG+    N + P P+
Sbjct: 190 LAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPM 240


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 25/257 (9%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  RI     G    +L++D G+V    + +             V  P  ++SL+N  V
Sbjct: 73  LQNERIRSIVCGEAGAVLLADDGKVLIMDQST-------------VCRP--LKSLENRQV 117

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG- 162
           +Q A G+  +  LS +G+++ +      +LG   E    +    L +L  IPV QI+AG 
Sbjct: 118 IQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGG 177

Query: 163 -YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
            + ++L+L    SG+ V+  G    G+LG G   D   P +++   L   + V ++ G  
Sbjct: 178 NHSFVLSL----SGV-VFGWGSNSAGQLGLGDTKDRFVPTIVK--SLCGKKTVSISCGGE 230

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           H A + + G V T+G G +G LGH + + E  P+++  L   K   V  G + T V  E 
Sbjct: 231 HTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEES 290

Query: 282 GD-VYSFGCGESASLGH 297
              +YSFGCG    LG+
Sbjct: 291 SKLIYSFGCGMQGQLGN 307



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 22/218 (10%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           L +LEN  V+QIA G  + +AL+   +   ++  G    G+LG   R ++   +  +  Q
Sbjct: 109 LKSLENRQVIQIACGDQHSMALS---NDGQLFVWGENTHGQLG--LRKEQAGTQSPQHLQ 163

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L   PV  ++AG  H+ V+   G V  WG    G LG G+ +   VP +V++L   K +
Sbjct: 164 SLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTV 223

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
            ++ G   T  +S+ G V++FG G    LGHN++ D           P+L+  L     +
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH--------PRLIAEL--WGSK 273

Query: 327 VVQISLTNSIYWNAHTFALTESGKL-YAFGAGDKGQLG 363
           V Q++         HT    ES KL Y+FG G +GQLG
Sbjct: 274 VSQVTCGRH-----HTLVFEESSKLIYSFGCGMQGQLG 306



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 19/262 (7%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +GK  ++ +     PL  +SL+  ++IQ A G   +M +S+ GQ++ +G+++ G  + G+
Sbjct: 94  DGKVLIMDQSTVCRPL--KSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHG--QLGL 149

Query: 84  QGTKLVT-SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPN 140
           +  +  T SPQ ++SL  I V Q + G   + VLS  G V  F WG+++  +LG     +
Sbjct: 150 RKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTKD 207

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
              P  ++ +L     V I+ G  +   L+    G  V++ G G  G+LGH S  DE HP
Sbjct: 208 RFVP-TIVKSLCGKKTVSISCGGEHTATLS---KGGTVFTFGSGGFGQLGHNSLKDEHHP 263

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVV-- 257
           RLI   +L   +   V  G  H  V  +  + + ++G G  G LG+G +  +SVP  V  
Sbjct: 264 RLIA--ELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLL 321

Query: 258 -QALNDVKAIHVATGDYTTFVV 278
                +     + TG++ +F +
Sbjct: 322 PTECTEFTMEKLITGEHHSFAL 343



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 31/174 (17%)

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           H    DEK    +E  QL N +   +  G   A ++  DG+V                + 
Sbjct: 60  HNEDADEK----LEPLQLQNERIRSIVCGEAGAVLLADDGKVLIM-------------DQ 102

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
            +V + +++L + + I +A GD  +  +S DG ++ +G      LG            A 
Sbjct: 103 STVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR-------KEQAG 155

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             +PQ + SL ++   V QIS   +     H+F L+ SG ++ +G+   GQLG+
Sbjct: 156 TQSPQHLQSLCEI--PVAQISAGGN-----HSFVLSLSGVVFGWGSNSAGQLGL 202


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 139/333 (41%), Gaps = 27/333 (8%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           L G+   Q +AG   ++ +   G +YA+G +S G+   G       + P LV +   +  
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQ--LGNNSILNSSVPVLVSTPDGVTF 103

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP----VVQI 159
            Q + G   +  +  +G  Y +    D RLG+ T        PLL +   +P    + Q+
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTG--SSVPLLVSAGAVPSGVTISQV 161

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVVVAA 218
            AG  + LA+        +YS G    G+LG G+      P  +    +   +    V+A
Sbjct: 162 MAGGFHSLAVGSNGD---IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSA 218

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G  H+  +G +G+   WG  R G LG G+      P +V A   V    V+ GD  +  V
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV 278

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
             DG  Y++G  +S  LG+            + L P LV+ +  +   V Q+S       
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATT--------TSSLAPVLVSPMGGL--AVTQVSAGAD--- 325

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
             H+ A+   G  YA+G    GQLG   +   T
Sbjct: 326 --HSLAIGADGNAYAWGLNVNGQLGNNTITTST 356



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 138/346 (39%), Gaps = 34/346 (9%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G  ++L   V   P+   +  G+   Q +AGA  ++ +   G  YA+G+++ G    G  
Sbjct: 82  GNNSILNSSV---PVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTS 138

Query: 85  GTKLVTSPQLVES---LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
               V  P LV +      + + Q   G F +  +   G +Y++ +    +LG  T    
Sbjct: 139 TGSSV--PLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTL-- 194

Query: 142 VEPHPLLGTLENIPV----VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
               PL  +   +P      Q++AG  + LA+         Y+ G   GG+LG GS +  
Sbjct: 195 ASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGK---TYAWGEARGGQLGIGSISRT 251

Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
             P L+     ++     V+AG  H+  VG DG+   WG    G LG+        P +V
Sbjct: 252 PAPALVSAPAGVSFTQ--VSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLV 309

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
             +  +    V+ G   +  +  DG+ Y++G   +  LG+N I             P +V
Sbjct: 310 SPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTST--------VPVMV 361

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           T+   V    ++           H+         Y +GA   GQLG
Sbjct: 362 TAPDGVTFTRIEAG-------GLHSLTAASDENTYTWGANSFGQLG 400



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 23/291 (7%)

Query: 27  RNLLGREVNGT------PLYCRS---LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG 77
           RN  GR  NGT      PL   +     G+ I Q  AG   ++ +   G +Y++G +  G
Sbjct: 127 RNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSG 186

Query: 78  EAEYGVQGTKLVTSPQLVESL----KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 133
           +      GT L +S  L  S       +   Q + G+  +  +   G+ Y +      +L
Sbjct: 187 QLG---DGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQL 243

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS 193
           G  +      P  L+     +   Q++AG  + LA+     G A Y+ G    G+LG+ +
Sbjct: 244 GIGSISRTPAP-ALVSAPAGVSFTQVSAGDLHSLAVGSD--GKA-YAWGNNDSGQLGNAT 299

Query: 194 RTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
            T    P L+     L +  V  +AGA H+  +G DG    WG    G LG+      +V
Sbjct: 300 TTSSLAPVLVSPMGGLAVTQV--SAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTV 357

Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           P +V A + V    +  G   +   + D + Y++G      LG N  +DG 
Sbjct: 358 PVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLG-NGTSDGS 407



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 12/215 (5%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G+   Q +AG   ++ I   G+ YA+G+   G+   G+       +P LV +   +   Q
Sbjct: 210 GVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQ--LGIGSISRTPAPALVSAPAGVSFTQ 267

Query: 106 AAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            + G+  +  +  +G+ Y  +WGN+   +LG+ T  + + P  L+  +  + V Q++AG 
Sbjct: 268 VSAGDLHSLAVGSDGKAY--AWGNNDSGQLGNATTTSSLAPV-LVSPMGGLAVTQVSAGA 324

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            + LA+    +    Y+ G  + G+LG+ + T    P ++     +    +   AG  H+
Sbjct: 325 DHSLAIGADGN---AYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRI--EAGGLHS 379

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
                D    TWG   +G LG+G  +   VP  + 
Sbjct: 380 LTAASDENTYTWGANSFGQLGNGTSDGSLVPVAIS 414


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 35/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            P+ ++  K + +     G     VLS +G+ + + +              +E       
Sbjct: 102 KPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS-------------IEHARFQCI 148

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G        P ++E    +
Sbjct: 149 LQEKNIIQITCGDYHSLALS---KGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV 205

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G V +WG    G LG G+   +  P  ++AL+D K   +A
Sbjct: 206 PL--VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA 263

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T ++++ G V++FG G+   LGHN+          N L P+LVT L  V  RV Q
Sbjct: 264 CGGCHTALLTKSGLVFTFGDGKYGQLGHNST--------QNELRPRLVTGL--VGNRVTQ 313

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+         HT A ++++GK+++FG+G +GQLG
Sbjct: 314 IACGRQ-----HTLAYVSDTGKVFSFGSGKEGQLG 343



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 5/166 (3%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            TP    +L G+ ++Q +AG   +M +S +G VY++G++  G+   G+  T    SP  +
Sbjct: 194 STPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQ--LGLGHTYNKESPSCI 251

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E+L +  V   A G   TA+L++ G V+TF  G   +LGH++  N++ P  + G + N  
Sbjct: 252 EALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-R 310

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           V QIA G  + LA         V+S G G  G+LG+G   ++  PR
Sbjct: 311 VTQIACGRQHTLAYVSDTG--KVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 12/215 (5%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G +     ++P++VE+L  + +
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVPL 207

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           VQ + G   +  LS  G VY  SWG ND  +LG     N   P   +  L++  V  +A 
Sbjct: 208 VQISAGEAHSMALSMSGNVY--SWGRNDCGQLGLGHTYNKESPS-CIEALDDQKVEFLAC 264

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G C+   L    SG+ V++ G G  G+LGH S  +E  PRL+    L+  +   +A G  
Sbjct: 265 GGCHTALLT--KSGL-VFTFGDGKYGQLGHNSTQNELRPRLVTG--LVGNRVTQIACGRQ 319

Query: 222 HA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           H  A V   G+V ++G G+ G LG+G    + +P+
Sbjct: 320 HTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 26/162 (16%)

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G  H  V+  DG+   + +     + H   +C         L +   I +  GDY +  +
Sbjct: 120 GEEHMLVLSSDGKPFEYKYS----IEHARFQC--------ILQEKNIIQITCGDYHSLAL 167

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           S+ G+++++G      LG        G   A+  TP++V +L  V   +VQIS       
Sbjct: 168 SKGGELFAWGQNLDGQLG-------VGRIFASTSTPEIVENLSGVP--LVQISAGE---- 214

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            AH+ AL+ SG +Y++G  D GQLG+    N+      E +D
Sbjct: 215 -AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 255


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 31/257 (12%)

Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
           F W  D+R          +P  L G  + + ++Q A+G  + L L    S   VYS G  
Sbjct: 3   FHWAADSR----------QPRRLNGR-DGLELLQAASGERHSLLLF---SNHRVYSCGDN 48

Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
             G+LG     + + P  I+    L++   +V+ G  H+  V   GRV  WG G  G LG
Sbjct: 49  SLGQLGQKREQNTEQPEPIQALGTLDID--LVSCGKEHSIAVCHKGRVFAWGAGSEGQLG 106

Query: 245 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            G  +E   +P  ++ L  +K I V+ G Y +  +SEDG V+S+G      LG    +  
Sbjct: 107 IGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSS 166

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           Q        +PQ VTSL+        I L       +H+FAL+ +G  Y +G+   GQL 
Sbjct: 167 QA-------SPQKVTSLEG-------IPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLA 212

Query: 364 IELVNNQTERGNPERVD 380
           +   N+  +   P  +D
Sbjct: 213 LSGENSTVQISKPHSID 229



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G+ ++QAA+G   ++L+    +VY+ G +S G+   G +  +    P+ +++L  + +  
Sbjct: 20  GLELLQAASGERHSLLLFSNHRVYSCGDNSLGQ--LGQKREQNTEQPEPIQALGTLDIDL 77

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 164
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P+ + TL  I ++Q++ G+ 
Sbjct: 78  VSCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIKIIQVSCGHY 136

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHA 223
           + LAL+       V+S G    G+LG G ++  +  P+ +   + + L    VAAG  H+
Sbjct: 137 HSLALS---EDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPL--AQVAAGGSHS 191

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECE---SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
             +   G    WG    G L    E      S P  + AL ++  I+++ G   T V+++
Sbjct: 192 FALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTK 251

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
           DG V++FG   S  L +N     +G        PQLV  +K
Sbjct: 252 DGQVFTFGDNSSGQLQNNPRGKRRG--------PQLVEGIK 284



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 16/213 (7%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+N  P+  ++L GI+IIQ + G   ++ +S+ GQV+++GK+S G+   G+Q +    S
Sbjct: 111 KEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSS-QAS 169

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-----ARLGHHTEPNDVEPHP 146
           PQ V SL+ I + Q A G   +  LS  G  Y   WG++     A  G ++     +PH 
Sbjct: 170 PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSY--GWGSNSVGQLALSGENSTVQISKPHS 227

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            +  L+N+ V+ I+ GY +   L        V++ G    G+L +  R   + P+L+E  
Sbjct: 228 -IDALKNLGVIYISCGYEHTAVLT---KDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG- 282

Query: 207 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWG 238
             +  Q   +  G++H  A V   G+V + G G
Sbjct: 283 --IKGQVSKIECGSYHTIAYVYTTGQVVSLGHG 313



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 47/292 (16%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL--LGTLENIPVVQIA 160
           ++QAA G   + +L    RVY+    +  +LG   E N  +P P+  LGTL+   +  ++
Sbjct: 23  LLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLD---IDLVS 79

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP------- 213
            G  + +A+ C      V++ G G  G+LG G            +F+ +NL P       
Sbjct: 80  CGKEHSIAV-CHKG--RVFAWGAGSEGQLGIG------------EFKEINLMPMRIKTLG 124

Query: 214 ----VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHV 268
               + V+ G +H+  + +DG+V +WG    G LG G +   ++ P+ V +L  +    V
Sbjct: 125 GIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQV 184

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G   +F +S  G  Y +G   S S+G  A++ G+ N    +  P  + +LK  N  V+
Sbjct: 185 AAGGSHSFALSLTGTSYGWG---SNSVGQLALS-GE-NSTVQISKPHSIDALK--NLGVI 237

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            IS         HT  LT+ G+++ FG    GQL     N + +R  P+ V+
Sbjct: 238 YISCGYE-----HTAVLTKDGQVFTFGDNSSGQLQ---NNPRGKRRGPQLVE 281


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 34/293 (11%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           SP+L+ES     V   ++G    A+++R+G V+ +  GN  +LG      D++    + +
Sbjct: 282 SPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNI-DIDHPKRVES 340

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           LE++ V  +A       A+  +   + ++ +  G   + G    T     R I      +
Sbjct: 341 LEDVAVRSVACSDHQTCAVT-ESGELYLWGIDGGTIEQSGSQFLT-----RKISDVLGGS 394

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           L  + VA GAWH A+V   G++ T+G G +G LGHG+ E  + PK V++L  +K I V+ 
Sbjct: 395 LTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSC 454

Query: 271 GDYTTFVVSED------------GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
           G + T  + E             G ++++G G+   LGH   AD +       L P  VT
Sbjct: 455 GPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGH---ADSKRK-----LVPTCVT 506

Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            L  ++   +++S   ++     T AL+ SG +Y  G+   GQLG     +++
Sbjct: 507 EL--IDHDFIKVSCGWTL-----TVALSISGTVYTMGSSIHGQLGCPRAKDKS 552



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 140/354 (39%), Gaps = 64/354 (18%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    S     +   + GA    L++  G+V+ +G  + G+   G++    +  P+ VE
Sbjct: 282 SPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGK--LGLKVNIDIDHPKRVE 339

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-- 154
           SL+++ V   A  +  T  ++  G +Y   WG D                  GT+E    
Sbjct: 340 SLEDVAVRSVACSDHQTCAVTESGELYL--WGIDG-----------------GTIEQSGS 380

Query: 155 -----PVVQIAAGYCYLLALACQPSGMAV-------YSVGCGLGGKLGHGSRTDEKHPRL 202
                 +  +  G   +L++AC     A+       ++ G G  G LGHGS      P+ 
Sbjct: 381 QFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKE 440

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQD------------GRVCTWGWGRYGCLGHGNEEC 250
           +E  + + +  + V+ G WH A + +             G++ TWG G  G LGH + + 
Sbjct: 441 VESLRRMKV--ISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKR 498

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
           + VP  V  L D   I V+ G   T  +S  G VY+ G      LG     D   N    
Sbjct: 499 KLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLG 558

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            LT Q V  +   +                H   LT  G +Y +G G  GQLG+
Sbjct: 559 NLTRQFVKDIASGSH---------------HVAVLTSFGNVYTWGKGMNGQLGL 597



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
            + ++  A GA  T +++ +GQ++ +G  +FG   +G    + VT P+ VESL+ + V+ 
Sbjct: 394 SLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG--SLESVTKPKEVESLRRMKVIS 451

Query: 106 AAIGNFFTAVLSRE------------GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
            + G + TA +               G+++T+  G+  RLGH      + P  +   +++
Sbjct: 452 VSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDH 511

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              ++++ G+   +AL+   SG  VY++G  + G+LG   R  +K   ++    L NL  
Sbjct: 512 -DFIKVSCGWTLTVALSI--SG-TVYTMGSSIHGQLG-CPRAKDKSVNVV----LGNLTR 562

Query: 214 VVV---AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
             V   A+G+ H AV+   G V TWG G  G LG G+    + P +V+ L D     +A 
Sbjct: 563 QFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIAC 622

Query: 271 G 271
           G
Sbjct: 623 G 623



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 28/314 (8%)

Query: 24  NGKRNLLGREVN---GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
           NG    LG +VN     P    SL+ + +   A    +T  ++++G++Y +G D     +
Sbjct: 318 NGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQ 377

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH---- 136
            G Q      S  L  SL    V+  A G + TA+++  G+++T+  G    LGH     
Sbjct: 378 SGSQFLTRKISDVLGGSLT---VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES 434

Query: 137 -TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSV---------GCGLG 186
            T+P +VE      +L  + V+ ++ G  +  A+    +    Y+          G G  
Sbjct: 435 VTKPKEVE------SLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDK 488

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LGH     +  P  + +  L++   + V+ G      +   G V T G   +G LG  
Sbjct: 489 GRLGHADSKRKLVPTCVTE--LIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCP 546

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
             + +SV  V+  L       +A+G +   V++  G+VY++G G +  LG   + D    
Sbjct: 547 RAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSP 606

Query: 307 RHANVLTPQLVTSL 320
                L  +LV S+
Sbjct: 607 VLVEPLGDRLVESI 620


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 139/277 (50%), Gaps = 20/277 (7%)

Query: 24  NGKRNLLGREVNGTPL-----YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE 78
           +  R  LGR+  GTP         +L+ + +   + G   ++ +   G+V+A+G  S  E
Sbjct: 21  DNSRGQLGRK--GTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAAS--E 76

Query: 79  AEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH 135
            + G+   K  T  P+ +++L +I ++Q A G++ +  LS +G+V  FSWG ++  +LG 
Sbjct: 77  GQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQV--FSWGKNSHGQLGL 134

Query: 136 HTE-PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
             E P+   P  +  +LE IP+ Q+AAG  +  AL+   +     S   G     G+ + 
Sbjct: 135 GKEFPSQASPQRV-RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAP 193

Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
                P L+   + L++  V ++ G  H AV+ QDG+V T+G   YG LGH +   +  P
Sbjct: 194 VQRYKPVLVGALKTLSV--VFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGP 251

Query: 255 KVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 290
           ++V+ +  + +  +  G Y T   V   G V SFG G
Sbjct: 252 QLVERIEGLVS-QIDCGSYHTLAYVYTTGQVVSFGRG 287



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 24/261 (9%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E    P   ++L  I+IIQ A G   ++ +S+ GQV+++GK+S G+   G +      S
Sbjct: 85  KETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPS-QAS 143

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-----ARLGHHTEPNDVEPHP 146
           PQ V SL+ I + Q A G   +  LS  G   +F WG++     A  G++      +P  
Sbjct: 144 PQRVRSLEGIPLAQVAAGGAHSFALSLSGT--SFGWGSNNAGQLALSGNNAPVQRYKP-V 200

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+G L+ + VV I+ GY +   L        V++ G    G+LGH S  +++ P+L+E+ 
Sbjct: 201 LVGALKTLSVVFISCGYEHTAVLT---QDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERI 257

Query: 207 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHGNE-----ECESVPKVVQA- 259
           + L  Q   +  G++H  A V   G+V ++G G  GC           E   V  ++ A 
Sbjct: 258 EGLVSQ---IDCGSYHTLAYVYTTGQVVSFGRGP-GCTRSSPHPEALAESSDVSCLISAN 313

Query: 260 -LNDVKAIHVATGDYTTFVVS 279
            L DV+  H+  G Y  FV +
Sbjct: 314 DLEDVQVKHIFAGTYANFVTT 334



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            V S G    G+LG       + P  I   + L++   +V+ G  H+  V   GRV  WG
Sbjct: 15  TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHV--ALVSCGKEHSLAVCHKGRVFAWG 72

Query: 237 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
               G LG G  +E   +PK ++ L D+K I VA G Y +  +SEDG V+S+G      L
Sbjct: 73  AASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQL 132

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
                  G G    +  +PQ V SL+        I L       AH+FAL+ SG  + +G
Sbjct: 133 -------GLGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLSGTSFGWG 178

Query: 356 AGDKGQLGIELVNNQTERGNP 376
           + + GQL +   N   +R  P
Sbjct: 179 SNNAGQLALSGNNAPVQRYKP 199



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 28/309 (9%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
           +G   ++L+   G V + G +S G+   G +GT     P+ + +L+ + V   + G   +
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59

Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             +  +GRV+ +   ++ +LG             + TL +I ++Q+A G+ + LAL+   
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALS--- 116

Query: 174 SGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
               V+S G    G+LG G     +  P+ +   + + L    VAAG  H+  +   G  
Sbjct: 117 EDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL--AQVAAGGAHSFALSLSGTS 174

Query: 233 CTWGWGRYGCL---GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
             WG    G L   G+        P +V AL  +  + ++ G   T V+++DG V++FG 
Sbjct: 175 FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGD 234

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA-LTES 348
                LGH++ A+ +G        PQLV   +++   V QI        + HT A +  +
Sbjct: 235 NSYGQLGHDSTAEKRG--------PQLV---ERIEGLVSQIDCG-----SYHTLAYVYTT 278

Query: 349 GKLYAFGAG 357
           G++ +FG G
Sbjct: 279 GQVVSFGRG 287



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 25/259 (9%)

Query: 126 SWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           S G+++R  LG    P   +P  +   LE + V  ++ G  + LA+ C      V++ G 
Sbjct: 18  SCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCGKEHSLAV-CHKG--RVFAWGA 73

Query: 184 GLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
              G+LG G   +    P+ I+   L +++ + VA G +H+  + +DG+V +WG   +G 
Sbjct: 74  ASEGQLGIGELKETTFIPKKIKT--LADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQ 131

Query: 243 LGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           LG G E   ++ P+ V++L  +    VA G   +F +S  G  + +G   +  L  +   
Sbjct: 132 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG-- 189

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
               N       P LV +LK ++  VV IS         HT  LT+ GK++ FG    GQ
Sbjct: 190 ---NNAPVQRYKPVLVGALKTLS--VVFISCGYE-----HTAVLTQDGKVFTFGDNSYGQ 239

Query: 362 LGIELVNNQTERGNPERVD 380
           LG    ++  E+  P+ V+
Sbjct: 240 LG---HDSTAEKRGPQLVE 255


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 34/323 (10%)

Query: 42  RSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           R + G+ R +  AAG    + +   G V+A+G + +G+   G   T    +P  V  L+ 
Sbjct: 164 RPVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQ--LGNGSTAHRATPVQVPGLQG 221

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           +  V  A G   +  L  +G V+ + + +  +LG+ T  +   P P+ G  +   VV +A
Sbjct: 222 VVAV--AGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVA 276

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           AG  + LAL    +   V++ G    G+LG    T    P  +E  + +    V VA G 
Sbjct: 277 AGGFHSLALCADGT---VWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV----VAVAGGF 329

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +H+  V   G + +WG    G LG+G+    + P  VQ L  V +  VA G   +  V  
Sbjct: 330 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQA 387

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DG V+++G  E   LGH         R     TP  V  L+       ++++    Y   
Sbjct: 388 DGTVWAWGRNEEGQLGHE--------RAPERATPVRVPGLQG------EVAVAAGFY--- 430

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           H+ ++   G L+A+G  D GQLG
Sbjct: 431 HSLSVQAGGSLWAWGLNDFGQLG 453



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 151/345 (43%), Gaps = 42/345 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP      +G+R +  A G   ++ +   G V+A G +S G+   G   T   ++P+ V 
Sbjct: 112 TPAQAADQRGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVP 167

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L     V  A G      L  +G V+  +WGN+   +LG+ +  +   P  + G L+  
Sbjct: 168 GLSRAVAV--AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG- 221

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV +A GY + LAL    +   V++ G    G+LG+G+      P  +        Q V
Sbjct: 222 -VVAVAGGYMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVV 273

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VAAG +H+  +  DG V  WG   +G LG       + P  V+ L +V  + VA G Y 
Sbjct: 274 SVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYH 331

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  V   G ++S+G   S  LG+ + +     R A V     VTS+              
Sbjct: 332 SLAVRAGGSLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM--------- 380

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 H+ A+   G ++A+G  ++GQLG E      ER  P RV
Sbjct: 381 ------HSVAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 416



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 22/264 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    LQG+  +  A G   ++ +   G V+A+G + +G+   G      V SP  V 
Sbjct: 212 TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTT----VHSPTPVP 265

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
                 VV  A G F +  L  +G V+  +WGN+   +LG        +P  + G  E  
Sbjct: 266 VPGLSQVVSVAAGGFHSLALCADGTVW--AWGNNGFGQLGEAVSTQRTKPGRVEGLRE-- 321

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV +A G+ + LA+    +G +++S G    G+LG+GS +    P  ++    +     
Sbjct: 322 -VVAVAGGFYHSLAVR---AGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVT---- 373

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VAAG  H+  V  DG V  WG    G LGH      + P  V  L     + VA G Y 
Sbjct: 374 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQG--EVAVAAGFYH 431

Query: 275 TFVVSEDGDVYSFGCGESASLGHN 298
           +  V   G ++++G  +   LG +
Sbjct: 432 SLSVQAGGSLWAWGLNDFGQLGDS 455



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A GY Y LAL    +   V++ G    G+LG+G+      PR +        + V 
Sbjct: 122 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 174

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VAAG  HA  +  DG V  WG   YG LG+G+    + P  V  L  V  + VA G   +
Sbjct: 175 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 232

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G  +   LG+            +  TP  V  L QV      +S+   
Sbjct: 233 LALCADGTVWAWGFNDYGQLGNGTT--------VHSPTPVPVPGLSQV------VSVAAG 278

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +   H+ AL   G ++A+G    GQLG E V+  T+R  P RV+
Sbjct: 279 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 317



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 20/210 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  AAG   ++ +   G V+A+G + FG+    V   +  T P  VE L+ +  V   
Sbjct: 271 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV--- 325

Query: 108 IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G F+ ++  R G    +SWGN+   +LG+ +  +   P P+ G      V  +AAG  +
Sbjct: 326 AGGFYHSLAVRAGGSL-WSWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH 381

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAA 224
             ++A Q  G  V++ G    G+LGH     E+ P      ++  LQ  V VAAG +H+ 
Sbjct: 382 --SVAVQADGT-VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSL 433

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            V   G +  WG   +G LG        VP
Sbjct: 434 SVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 149/337 (44%), Gaps = 40/337 (11%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           QGI+++  A G   T+ + + G VY++G + +G+   GV  T+    P L+  + +  +V
Sbjct: 495 QGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQL--GVGDTRTRYRPVLITHISSKQIV 551

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
               G + T  ++ + +VY++ WG   +LG  +  N + P   +  L++  V+Q AAGY 
Sbjct: 552 SVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQ-IDLLDSHKVIQAAAGYA 610

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
           +   L  Q     VY+ G  L G+LG GS   +  P+L++   L ++   +++ G +   
Sbjct: 611 HSAVLTSQR---YVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSI--YLISCGPFETI 665

Query: 225 VVGQDGRVCTWG----------------WGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
            + +D  +  WG                +GR       +      P+ +Q         +
Sbjct: 666 AISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQI 725

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
             G++   +++    VY++G  +   LGH    D           P+LV +L  +   ++
Sbjct: 726 FCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSA--------PRLVKAL--IRRAII 775

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
            +++         + A      + A+G  D+G++GIE
Sbjct: 776 GVAVGAEF-----SVAFDADDNIMAWGRNDEGKIGIE 807



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 28/243 (11%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           +G+  L   E   TP     L   ++IQAAAG   + +++    VY FG D +G+   G 
Sbjct: 577 HGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGS 636

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND------------A 131
              +++  PQLV+SL    +   + G F T  +S +  +  F WG +            +
Sbjct: 637 HYKQVI--PQLVDSLTLDSIYLISCGPFETIAISEDQTI--FCWGRNYHQFYICAKAESS 692

Query: 132 RLGHHTEPNDVE------PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
           + G     N  +      P  L   L++ P+ QI  G  + + L    S   VY+ G   
Sbjct: 693 KYGRKMASNTKDLNHRFYPETLQFQLQH-PITQIFCGNWHYIILT---SVNQVYTWGYND 748

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
            G+LGH ++ D+  PRL++   L+    + VA GA  +     D  +  WG    G +G 
Sbjct: 749 CGQLGHYNKIDQSAPRLVK--ALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGI 806

Query: 246 GNE 248
            NE
Sbjct: 807 ENE 809


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 35/275 (12%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
            P+ ++  K + +     G     VLS +G+ + + +              +E       
Sbjct: 97  KPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYS-------------IEHARFQCI 143

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G        P ++E    +
Sbjct: 144 LQEKNIIQITCGDYHSLALS---KGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV 200

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G V +WG    G LG G+   +  P  ++AL+D K   +A
Sbjct: 201 PL--VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA 258

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T ++++ G V++FG G+   LGHN+          N L P+LVT L  V  RV Q
Sbjct: 259 CGGCHTALLTKSGLVFTFGDGKYGQLGHNST--------QNELRPRLVTGL--VGNRVTQ 308

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+         HT A ++++GK+++FG+G +GQLG
Sbjct: 309 IACGRQ-----HTLAYVSDTGKVFSFGSGKEGQLG 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 5/166 (3%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            TP    +L G+ ++Q +AG   +M +S +G VY++G++  G+   G+  T    SP  +
Sbjct: 189 STPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQ--LGLGHTYNKESPSCI 246

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           E+L +  V   A G   TA+L++ G V+TF  G   +LGH++  N++ P  + G + N  
Sbjct: 247 EALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-R 305

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
           V QIA G  + LA         V+S G G  G+LG+G   ++  PR
Sbjct: 306 VTQIACGRQHTLAYVSDTG--KVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 12/215 (5%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ   G   ++ +S  G+++A+G++  G+   G +     ++P++VE+L  + +
Sbjct: 144 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVPL 202

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           VQ + G   +  LS  G VY  SWG ND  +LG     N   P   +  L++  V  +A 
Sbjct: 203 VQISAGEAHSMALSMSGNVY--SWGRNDCGQLGLGHTYNKESP-SCIEALDDQKVEFLAC 259

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G C+   L    SG+ V++ G G  G+LGH S  +E  PRL+    L+  +   +A G  
Sbjct: 260 GGCHTALLT--KSGL-VFTFGDGKYGQLGHNSTQNELRPRLVTG--LVGNRVTQIACGRQ 314

Query: 222 HA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
           H  A V   G+V ++G G+ G LG+G    + +P+
Sbjct: 315 HTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 26/162 (16%)

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           G  H  V+  DG+   + +     + H   +C         L +   I +  GDY +  +
Sbjct: 115 GEEHMLVLSSDGKPFEYKYS----IEHARFQC--------ILQEKNIIQITCGDYHSLAL 162

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           S+ G+++++G      LG        G   A+  TP++V +L  V   +VQIS       
Sbjct: 163 SKGGELFAWGQNLDGQLG-------VGRIFASTSTPEIVENLSGVP--LVQISAGE---- 209

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            AH+ AL+ SG +Y++G  D GQLG+    N+      E +D
Sbjct: 210 -AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 250


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 25/293 (8%)

Query: 43   SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            S+QG  + Q A   G    T+ ++++G+V+++G   +G+  +G   +     P+ +E+L+
Sbjct: 1879 SIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 1936

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               V+Q + G   +AV++ +G+++TF  G+  RLG  T  N   P  ++  LE+  +  +
Sbjct: 1937 GEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYV 1995

Query: 160  AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
            A G  + L ++    G  V++ G G  GKLG G+   +  P  I+  Q   ++   VA G
Sbjct: 1996 ACGLNHTLCVSAD--GTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKK--VACG 2051

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTT 275
               +  + + G+V TWG  R   +G     G   C+  P+ V +L+      V  G   T
Sbjct: 2052 TQFSVALSKYGKVFTWGQERL--IGQPDTRGGSNCQ--PQEVASLSGYFIEDVVCGAEHT 2107

Query: 276  FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
             V++ DGDV+ +G      L       G G+ ++ V  PQLV  L   N R V
Sbjct: 2108 LVLTSDGDVWGWGSNSEGQL-------GLGHTNSPVREPQLVPCLTGKNIRQV 2153



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 131/315 (41%), Gaps = 65/315 (20%)

Query: 105  QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA--- 161
            Q   G   T V+   G V     G+  RLG     +D+     + +++   V Q+A    
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNS-DDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 162  --GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
              G+     LA   SG  V+S G G  GKLGHG+   ++ PR IE  Q    + + ++ G
Sbjct: 1894 SDGH----TLAVTESG-EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ--GEEVIQLSCG 1946

Query: 220  AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
              H+AVV  DG++ T+G G YG LG G    + VP  V AL   +  +VA G   T  VS
Sbjct: 1947 FKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVS 2006

Query: 280  EDG-DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNS 335
             DG +V++FG G+   LG       QGN     L  ++      V ++V    Q S+  S
Sbjct: 2007 ADGTNVWAFGDGDFGKLG-------QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059

Query: 336  IY-----WN------------------------------------AHTFALTESGKLYAF 354
             Y     W                                      HT  LT  G ++ +
Sbjct: 2060 KYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGW 2119

Query: 355  GAGDKGQLGIELVNN 369
            G+  +GQLG+   N+
Sbjct: 2120 GSNSEGQLGLGHTNS 2134



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 281
            VV  +G V   G G YG LG GN +       + ++       +AT    D  T  V+E 
Sbjct: 1845 VVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTES 1904

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            G+V+S+G G+   LGH     G  +R      P+ + +L+   E V+Q+S         H
Sbjct: 1905 GEVFSWGDGDYGKLGH-----GNSDRQRR---PRQIEALQ--GEEVIQLSCGFK-----H 1949

Query: 342  TFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            +  +T  GKL+ FG GD G+LG+    N+
Sbjct: 1950 SAVVTADGKLFTFGNGDYGRLGLGTTTNK 1978


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 147
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   
Sbjct: 7   VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQR- 65

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   +
Sbjct: 66  VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           LL  Q VV ++ G  H AV+ + G V T+G G  G LGHG+   E  P+ V  L   +  
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVT 179

Query: 267 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 53  LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQ--LGLSDEK 110

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 111 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 170

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P  ++ +
Sbjct: 171 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 226



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 23/182 (12%)

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 257
           PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V
Sbjct: 10  PRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV 66

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           ++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q  
Sbjct: 67  RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
                   +VV IS         HT  LT+SG ++ FGAG  GQLG   +N++    NP 
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGHGSMNDEV---NPR 168

Query: 378 RV 379
           RV
Sbjct: 169 RV 170



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 28/232 (12%)

Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---- 192
           T  + V    L+  L    ++Q++ G  + LALA        ++ G    G+LG G    
Sbjct: 2   TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFP 58

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
           S+T  +  R +E   L       VAAG  H+  +   G V  WG    G LG  +E+   
Sbjct: 59  SQTSPQRVRSLEGIPLAQ-----VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 113

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            P  V+ L   K ++++ G+  T V+++ G V++FG G    LGH ++ D    R     
Sbjct: 114 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV--- 170

Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
                  L+ +   V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 171 -------LELMGSEVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 11/222 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   + L    I+Q + G    + ++  GQ + +GK+S G+   G +     TSPQ V S
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPS-QTSPQRVRS 68

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+ I + Q A G   +  LS  G V+ +   N  +LG   E  D E    +  L    VV
Sbjct: 69  LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQKVV 127

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            I+ G  +   L    SG  V++ G G  G+LGHGS  DE +PR +   +L+  +   +A
Sbjct: 128 YISCGEEHTAVLT--KSG-GVFTFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIA 182

Query: 218 AGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 255
            G  H  A V   G +  +G G  G LG G   N +C S  K
Sbjct: 183 CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224


>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 588

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 32/261 (12%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--- 102
           G++I+  AAG   T+ +SD GQV+ +G    G+   G +  + V+SP  V  +++     
Sbjct: 331 GVKIVAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSR-IRTVSSPHPVPCIESALYTK 389

Query: 103 -----------------------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
                                  V   A G   +AV++  G + TF WG   + G     
Sbjct: 390 DRPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNT- 448

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           +DV     + ++  I +  +AAG   L    C      VYS G    G+LG GS   E  
Sbjct: 449 DDVLSPTCVSSILGIKMQDVAAG---LWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETL 505

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           P+L++   L N     V+ GA H+A++  +G V  WGW +YG LG G+    +VP  V+ 
Sbjct: 506 PKLVDATSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVR- 564

Query: 260 LNDVKAIHVATGDYTTFVVSE 280
           ++    ++V+ G + T V++E
Sbjct: 565 VDAYHPLNVSCGWWHTLVLAE 585



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 138/334 (41%), Gaps = 53/334 (15%)

Query: 52  AAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 111
           AAAG+  +    D+ +         G          L   P +V     + +V  A G  
Sbjct: 283 AAAGSSESRGTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGR 342

Query: 112 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPLLGTLENIPVVQIAAGYCYLLALA 170
            T  LS  G+V+ + +G + +LG  +    V  PHP       +P ++ A      L   
Sbjct: 343 HTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHP-------VPCIESA------LYTK 389

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
            +PS M               G++  E H       ++L      +A G  H+AVV   G
Sbjct: 390 DRPSAM--------------KGNKAAEGH-----VSKVLGNCVRAIACGGRHSAVVTDSG 430

Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
            + T+GWG YG  G GN +    P  V ++  +K   VA G + T   S DGDVYSFG  
Sbjct: 431 ALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGN 490

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLV--TSLKQVNERVVQISLTNSIYWNAHTFALTES 348
           +   L       G G+  A  L P+LV  TSL+  N R V            H+  +T+ 
Sbjct: 491 QFGQL-------GTGSDQAETL-PKLVDATSLENKNARSVSCGAR-------HSAIITDE 535

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
           G+++ +G    GQLG+    +  +R  P  V +D
Sbjct: 536 GEVFCWGWNKYGQLGL---GDSMDRNVPCSVRVD 566



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    S+ GI++   AAG   T+  S  G VY+FG + FG  + G    +  T P+LV+
Sbjct: 453 SPTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFG--QLGTGSDQAETLPKLVD 510

Query: 97  --SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
             SL+N      + G   +A+++ EG V+ + W    +LG
Sbjct: 511 ATSLENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLG 550


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 43/350 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+   +L G+  I  AAG   ++ +   G V+A+G +++G    G   T   T P  V 
Sbjct: 38  SPVQVSNLTGV--ISVAAGYYHSLALKSDGTVWAWGLNTYGN--LGDNTTTTRTKPVQVL 93

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-- 154
           +L  +  + A     F   L  +G V+++ +  ++ LG+ +      P  +  +   I  
Sbjct: 94  NLTGVIAIAADYYQSF--ALKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILS 151

Query: 155 ---PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
               VV IAAG  + LAL    S   V+S G    G+LG+G+   +         Q +NL
Sbjct: 152 PLTDVVAIAAGTHHTLAL---KSNGTVWSWGLNSSGQLGNGTLATQS-----AAVQAVNL 203

Query: 212 -QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
              V ++AGA H+  +  +G V +WG   YG LG+G     + P  V  LN++K++  A 
Sbjct: 204 TDAVAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNNIKSL--AA 261

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           G   +  +  DG V ++G      +G+ A         ANVL+P  V++L  V      +
Sbjct: 262 GGNHSLALKSDGTVTAWGYNAYGQVGNGAT--------ANVLSPIAVSTLSGVTAVSAGV 313

Query: 331 SLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           S         H+ A+  S G ++ +G    G LG    N +  R  P  +
Sbjct: 314 S---------HSHAIGSSNGVIWGWGLNTYGGLG---NNTKVNRSTPGTI 351



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 38/340 (11%)

Query: 28  NLLGREVNGTPLYCRSLQGI----RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           N  G+  NGT     S  G+     I   AAG   ++ +   G V A+G +++G+   G 
Sbjct: 231 NTYGQLGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGA 290

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             T  V SP  V +L  +  V A + +   A+ S  G ++ +       LG++T+ N   
Sbjct: 291 --TANVLSPIAVSTLSGVTAVSAGVSHSH-AIGSSNGVIWGWGLNTYGGLGNNTKVNRST 347

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  +L T     +  +A G  + + +    +   V++ G    G++G G+       R +
Sbjct: 348 PGTILLTSG---LQGVAGGAQHTIYVKGDGT---VWAWGSNTYGQIGDGTPL-----RRL 396

Query: 204 EQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
              QL  L  ++ VAAGA H+  +  +G V  WG   +G LG G+    S+P  V  L  
Sbjct: 397 TPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTG 456

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           + A+  A G   +  +  DG VY++G      LG     D         L+P  V  L  
Sbjct: 457 IVAL--AAGATHSLALRFDGTVYAWGRNHLGQLGDETCTD--------RLSPVAVHYL-- 504

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
             E+VV IS  ++     H+ A+ ++G  +A+G+ + GQL
Sbjct: 505 --EKVVAISAGDN-----HSLAIHQNGTAFAWGSDEHGQL 537



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 24/199 (12%)

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVG 227
           LA +  G  V++ G    G+LG+G+ TD   P      Q+ NL  V+ VAAG +H+  + 
Sbjct: 9   LAVRQDGT-VWASGYNYHGELGNGTATDSLSP-----VQVSNLTGVISVAAGYYHSLALK 62

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
            DG V  WG   YG LG       + P  VQ LN    I +A   Y +F +  DG V+S+
Sbjct: 63  SDGTVWAWGLNTYGNLGDNTTTTRTKP--VQVLNLTGVIAIAADYYQSFALKSDGTVWSW 120

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA---HTFA 344
           G   +++LG           +A+  T +L   ++Q    ++   LT+ +   A   HT A
Sbjct: 121 GYNGNSALG-----------NASPATQKLPAQVQQSFGGILS-PLTDVVAIAAGTHHTLA 168

Query: 345 LTESGKLYAFGAGDKGQLG 363
           L  +G ++++G    GQLG
Sbjct: 169 LKSNGTVWSWGLNSSGQLG 187



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 144/352 (40%), Gaps = 45/352 (12%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G    + R   GT L    LQG+     A GA  T+ +   G V+A+G +++G+   G  
Sbjct: 338 GNNTKVNRSTPGTILLTSGLQGV-----AGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTP 392

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
             +L  +P  + +L  I  V A  G   +  L+  G V+ +   N  +LG  +  N   P
Sbjct: 393 LRRL--TPVQLSTLTGIIAVAA--GANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLP 448

Query: 145 HPLLGTLENIP----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
                    +P    +V +AAG  + LAL    +   VY+ G    G+LG  + TD   P
Sbjct: 449 -------TQVPNLTGIVALAAGATHSLALRFDGT---VYAWGRNHLGQLGDETCTDRLSP 498

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-GHGNEECESVPKVVQA 259
             +   +    + V ++AG  H+  + Q+G    WG   +G L   G+      P + Q 
Sbjct: 499 VAVHYLE----KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSPLISQI 554

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
              VK I +A G   T ++  +G  ++ G      LG     D           P  +T+
Sbjct: 555 PGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKS--------APVPITT 606

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           L     R+     T++        ALT +G +  +G    GQLG     ++T
Sbjct: 607 LTNA-ARLAAGGNTSA--------ALTTNGTVSTWGLNSSGQLGDNTTASRT 649



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 24/327 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+   +L GI  I  AAGA  ++ ++  G V+A+G+++ G+   G    + +  P  V 
Sbjct: 397 TPVQLSTLTGI--IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVP 452

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L  I  + A  G   +  L  +G VY +   +  +LG  T  + + P  +   LE   V
Sbjct: 453 NLTGIVALAA--GATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVH-YLEK--V 507

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V I+AG  +  +LA   +G A ++ G    G+L        +   LI Q   + ++ + +
Sbjct: 508 VAISAGDNH--SLAIHQNGTA-FAWGSDEHGQLCDSGSGSGRFSPLISQIPGI-VKGIGI 563

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           AAGA H  ++  +G     G   YG LG G    +S P  +  L +  A  +A G  T+ 
Sbjct: 564 AAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPITTLTN--AARLAAGGNTSA 621

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            ++ +G V ++G   S  LG N  A          + P L T    V       SL    
Sbjct: 622 ALTTNGTVSTWGLNSSGQLGDNTTAS------RTTIAPVLRTVYPTVEVFSGVASLGAGT 675

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLG 363
              AH  A+   G ++++G  D GQ+G
Sbjct: 676 ---AHLTAVKTDGYVHSWGLNDSGQIG 699



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 143/335 (42%), Gaps = 43/335 (12%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  AAG   T+ +   G V+++G +S G+   G     L T    V+++     V  + 
Sbjct: 156 VVAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGT----LATQSAAVQAVNLTDAVAISA 211

Query: 109 GNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G   +  L   G V   SWG +   +LG+ T      P  + G L NI    +AAG  + 
Sbjct: 212 GAAHSLALRANGAV--VSWGANTYGQLGNGTTTTSASPVGVSG-LNNIK--SLAAGGNHS 266

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
           LAL    +   V + G    G++G+G+  +   P  +     +      V+AG  H+  +
Sbjct: 267 LALKSDGT---VTAWGYNAYGQVGNGATANVLSPIAVSTLSGV----TAVSAGVSHSHAI 319

Query: 227 GQDGRVCTWGWG--RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           G    V  WGWG   YG LG+  +   S P  +   + ++   VA G   T  V  DG V
Sbjct: 320 GSSNGVI-WGWGLNTYGGLGNNTKVNRSTPGTILLTSGLQG--VAGGAQHTIYVKGDGTV 376

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +++G        +  I DG   R    LTP  +++L  +       +         H+ A
Sbjct: 377 WAWGSNT-----YGQIGDGTPLRR---LTPVQLSTLTGIIAVAAGAN---------HSLA 419

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           L  +G ++A+G  + GQLG     + T R  P +V
Sbjct: 420 LAANGTVFAWGRNNHGQLGD---GSTTNRSLPTQV 451



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 146/356 (41%), Gaps = 39/356 (10%)

Query: 28  NLLGREVNGT-PLYCRSLQGIRIIQA---AAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           N  G+  NGT      ++Q + +  A   +AGA  ++ +   G V ++G +++G+   G 
Sbjct: 181 NSSGQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVVSWGANTYGQLGNGT 240

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             T    SP  V  L NI  + AA GN   A L  +G V  + +    ++G+    N + 
Sbjct: 241 --TTTSASPVGVSGLNNIKSL-AAGGNHSLA-LKSDGTVTAWGYNAYGQVGNGATANVLS 296

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P   + TL  +  V     + +    A   S   ++  G    G LG+ ++ +   P  I
Sbjct: 297 P-IAVSTLSGVTAVSAGVSHSH----AIGSSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI 351

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
               LL      VA GA H   V  DG V  WG   YG +G G       P  +  L  +
Sbjct: 352 ----LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTGI 407

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
             I VA G   +  ++ +G V+++G      LG  +      NR      P L       
Sbjct: 408 --IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTT----NRSLPTQVPNLT------ 455

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
              +V ++   +     H+ AL   G +YA+G    GQLG E     T+R +P  V
Sbjct: 456 --GIVALAAGAT-----HSLALRFDGTVYAWGRNHLGQLGDETC---TDRLSPVAV 501



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 35/279 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    +L GI  +  AAGA  ++ +   G VYA+G++  G+   G +      SP  V  
Sbjct: 448 PTQVPNLTGI--VALAAGATHSLALRFDGTVYAWGRNHLGQ--LGDETCTDRLSPVAVHY 503

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP-----HPLLGTLE 152
           L+ +  + A  G+  +  + + G    F+WG+D     H +  D         PL+  + 
Sbjct: 504 LEKVVAISA--GDNHSLAIHQNGTA--FAWGSD----EHGQLCDSGSGSGRFSPLISQIP 555

Query: 153 NI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            I   + IAAG  + L L  + +G A ++ G  L G+LG G+ TD+  P  I        
Sbjct: 556 GIVKGIGIAAGANHTLLL--EANGTA-WACGDNLYGQLGDGTTTDKSAPVPITTLT---- 608

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES--------VPKVVQALNDV 263
               +AAG   +A +  +G V TWG    G LG       +        V   V+  + V
Sbjct: 609 NAARLAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGV 668

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
            ++   T   T   V  DG V+S+G  +S  +G   + +
Sbjct: 669 ASLGAGTAHLT--AVKTDGYVHSWGLNDSGQIGDGTLVN 705



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 19/145 (13%)

Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           GA H   V QDG V   G+  +G LG+G       P  VQ  N    I VA G Y +  +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTGVISVAAGYYHSLAL 61

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
             DG V+++G     +LG N              T    T   QV      I++    Y 
Sbjct: 62  KSDGTVWAWGLNTYGNLGDN--------------TTTTRTKPVQVLNLTGVIAIAADYY- 106

Query: 339 NAHTFALTESGKLYAFGAGDKGQLG 363
              +FAL   G ++++G      LG
Sbjct: 107 --QSFALKSDGTVWSWGYNGNSALG 129


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 65  PRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPY-HIST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  V+  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 184 VNIACGQ--MCSMAVVNTG-EVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 239 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 295

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S +L H        +  A   TP +   L  V
Sbjct: 296 HTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFATPAVTWRLLSV 348



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNAGLVPYHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V   G+V+ +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +     GN+     TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS----SGNQP----TPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 223 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               I  + A      +A  ++ G VY   WG
Sbjct: 283 K-DRIIEIAACHSAHTSAAKTQGGHVYM--WG 311


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 34/323 (10%)

Query: 42  RSLQGI-RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
           R + G+ R +  AAG    + +   G V+A+G + +G+   G   T    +P  V  L+ 
Sbjct: 167 RPVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQ--LGNGSTAHRATPVQVPGLQG 224

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           +  V  A G   +  L  +G V+ + + +  +LG+ T  +   P P+ G  +   VV +A
Sbjct: 225 VVAV--AGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ---VVSVA 279

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           AG  + LAL    +   V++ G    G+LG    T    P  +E  + +    V VA G 
Sbjct: 280 AGGFHSLALCADGT---VWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV----VAVAGGF 332

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           +H+  V   G + +WG    G LG+G+    + P  VQ L  V +  VA G   +  V  
Sbjct: 333 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTS--VAAGGMHSVAVQA 390

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           DG V+++G  E   LGH         R     TP  V  L+       ++++    Y   
Sbjct: 391 DGTVWAWGRNEEGQLGHE--------RAPERATPVRVPGLQG------EVAVAAGFY--- 433

Query: 341 HTFALTESGKLYAFGAGDKGQLG 363
           H+ ++   G L+A+G  D GQLG
Sbjct: 434 HSLSVQAGGSLWAWGLNDFGQLG 456



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 151/345 (43%), Gaps = 42/345 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP      +G+R +  A G   ++ +   G V+A G +S G+   G   T   ++P+ V 
Sbjct: 115 TPAQAADQRGVRAV--AGGYQYSLALHADGTVWACGSNSAGQLGNGT--TAARSAPRPVP 170

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
            L     V  A G      L  +G V+  +WGN+   +LG+ +  +   P  + G L+  
Sbjct: 171 GLSRAVAV--AAGGSHALALCADGTVW--AWGNNGYGQLGNGSTAHRATPVQVPG-LQG- 224

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV +A GY + LAL    +   V++ G    G+LG+G+      P  +        Q V
Sbjct: 225 -VVAVAGGYMHSLALCADGT---VWAWGFNDYGQLGNGTTVHSPTPVPVPGLS----QVV 276

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VAAG +H+  +  DG V  WG   +G LG       + P  V+ L +V  + VA G Y 
Sbjct: 277 SVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREV--VAVAGGFYH 334

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  V   G ++S+G   S  LG+ + +     R A V     VTS+              
Sbjct: 335 SLAVRAGGSLWSWGNNYSGQLGNGSFSSSA--RPAPVQGLGAVTSVAAGGM--------- 383

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                 H+ A+   G ++A+G  ++GQLG E      ER  P RV
Sbjct: 384 ------HSVAVQADGTVWAWGRNEEGQLGHE---RAPERATPVRV 419



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 22/264 (8%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP+    LQG+  +  A G   ++ +   G V+A+G + +G+   G      V SP  V 
Sbjct: 215 TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTT----VHSPTPVP 268

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
                 VV  A G F +  L  +G V+  +WGN+   +LG        +P  + G  E  
Sbjct: 269 VPGLSQVVSVAAGGFHSLALCADGTVW--AWGNNGFGQLGEAVSTQRTKPGRVEGLRE-- 324

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            VV +A G+ + LA+    +G +++S G    G+LG+GS +    P  ++    +     
Sbjct: 325 -VVAVAGGFYHSLAVR---AGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVT---- 376

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VAAG  H+  V  DG V  WG    G LGH      + P  V  L     + VA G Y 
Sbjct: 377 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQG--EVAVAAGFYH 434

Query: 275 TFVVSEDGDVYSFGCGESASLGHN 298
           +  V   G ++++G  +   LG +
Sbjct: 435 SLSVQAGGSLWAWGLNDFGQLGDS 458



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 29/225 (12%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  +A GY Y LAL    +   V++ G    G+LG+G+      PR +        + V 
Sbjct: 125 VRAVAGGYQYSLALHADGT---VWACGSNSAGQLGNGTTAARSAPRPVPGLS----RAVA 177

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VAAG  HA  +  DG V  WG   YG LG+G+    + P  V  L  V  + VA G   +
Sbjct: 178 VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGV--VAVAGGYMHS 235

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G  +   LG+            +  TP  V  L QV      +S+   
Sbjct: 236 LALCADGTVWAWGFNDYGQLGNGTT--------VHSPTPVPVPGLSQV------VSVAAG 281

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
            +   H+ AL   G ++A+G    GQLG E V+  T+R  P RV+
Sbjct: 282 GF---HSLALCADGTVWAWGNNGFGQLG-EAVS--TQRTKPGRVE 320



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 20/210 (9%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           +++  AAG   ++ +   G V+A+G + FG+    V   +  T P  VE L+ +  V   
Sbjct: 274 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREVVAV--- 328

Query: 108 IGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
            G F+ ++  R G    +SWGN+   +LG+ +  +   P P+ G      V  +AAG  +
Sbjct: 329 AGGFYHSLAVRAGGSL-WSWGNNYSGQLGNGSFSSSARPAPVQGLGA---VTSVAAGGMH 384

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PVVVAAGAWHAA 224
             ++A Q  G  V++ G    G+LGH     E+ P      ++  LQ  V VAAG +H+ 
Sbjct: 385 --SVAVQADGT-VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSL 436

Query: 225 VVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            V   G +  WG   +G LG        VP
Sbjct: 437 SVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 48/347 (13%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P    +L+ I   + +AG  +  +++ +G++Y +G +S  E + G    +  + P+LV+
Sbjct: 3   SPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANS--EGQLGTGDRRDASVPRLVK 60

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH-------------TEPNDVE 143
           +L    V   A     T     +G  Y +    + RLG H             +      
Sbjct: 61  ALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGAR 120

Query: 144 PHPLLGTLE--NIPVVQIAAGYCYLLALACQP-----------SGMAVYSVGCGLGGKLG 190
           P PL          V++   GY ++  +AC P              ++++ G GL G+LG
Sbjct: 121 PEPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLG 179

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE- 249
           HG   D   P  +   + +N+    +A GA H A V   G + TWG   +G LG G+   
Sbjct: 180 HGDEEDRHLPTAVHALENVNI--TAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRG 237

Query: 250 CESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
            + +PK V   L +   + VA G   +  V+ DG++Y++G G    LGH      QG   
Sbjct: 238 SQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEV----QG--E 289

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           ++ + P+ V       E ++ + + + +  +AHT  + E+G ++A+G
Sbjct: 290 SDEILPRRV-------EALLGLFVIHVVCGDAHTACIVENGNVWAWG 329



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 51/324 (15%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
           + SP+LV++LKNI   + + G    AV++  G +Y +   ++ +LG     +   P  L+
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPR-LV 59

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------------------ 190
             L    V  +A   C      C     + Y+ GC L G+LG                  
Sbjct: 60  KALHGKVVKAVA---CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 116

Query: 191 HGSRTDEKH-------PRLIEQFQLLNLQPVVVAAGAWHAAVVG---QD-GRVCTWGWGR 239
            G+R +          PR++E   L       VA G +H+A +G   QD   + T G G 
Sbjct: 117 TGARPEPLASACAVCTPRVLES--LCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 174

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G LGHG+EE   +P  V AL +V    +A G + T  V+  G +Y++G      L    
Sbjct: 175 NGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKL---- 230

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
              G G+   + L P+ V+   + N+ VV ++L +      H+  +T  G+LY +G G +
Sbjct: 231 ---GLGSTRGSQLLPKHVSGPLR-NKAVVSVALGSQ-----HSACVTTDGELYTWGQGRR 281

Query: 360 GQLGIELVNNQTERGNPERVDIDL 383
             LG E V  +++   P RV+  L
Sbjct: 282 --LGHE-VQGESDEILPRRVEALL 302



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 19/194 (9%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLG-HHTEPNDVEPHPLL 148
           P  V +L+N+ +   A G   TA ++  G +YT  WG  A  +LG   T  + + P  + 
Sbjct: 189 PTAVHALENVNITAIACGAHHTACVTSAGTLYT--WGGAAFGKLGLGSTRGSQLLPKHVS 246

Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLIEQF 206
           G L N  VV +A G  +    AC  +   +Y+ G G   +LGH     +DE  PR +E  
Sbjct: 247 GPLRNKAVVSVALGSQHS---ACVTTDGELYTWGQGR--RLGHEVQGESDEILPRRVEA- 300

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKA 265
            LL L  + V  G  H A + ++G V  WG  R   LGHG+ E   + P  ++ALN    
Sbjct: 301 -LLGLFVIHVVCGDAHTACIVENGNVWAWGTSRI--LGHGDPEVPPNRPACLRALNGKGV 357

Query: 266 IHVATGDYTTFVVS 279
           + ++    +TF V+
Sbjct: 358 VQLSCA--STFTVA 369


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPL 147
           V  P+L++ L    ++Q + GN+    L+ +G+ +T+   +  +LG   E P+   P   
Sbjct: 7   VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQR- 65

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           + +LE IP+ Q+AAG  +  AL+   SG AV+  G    G+LG     D + P  +   +
Sbjct: 66  VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV---K 119

Query: 208 LLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           LL  Q VV ++ G  H AV+ + G V T+G G YG LGH +   E  P+ V  L   +  
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 267 HVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
            +A G  +T   V   G +Y+FGCG    LG
Sbjct: 180 QIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 7/173 (4%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG+E     +P   RSL+GI + Q AAG   +  +S +G V+ +G ++ G+   G+   K
Sbjct: 53  LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 110

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
              SP  V+ L+   VV  + G   TAVL++ G V+TF  G+  +LGH +  ++V P  +
Sbjct: 111 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 170

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           L  L    V QIA G  + LA    PS   +Y+ GCG  G+LG G   + K P
Sbjct: 171 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 23/182 (12%)

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVV 257
           PRLI++   LN Q ++ V+ G WH   +  DG+  TWG   +G LG G E   ++ P+ V
Sbjct: 10  PRLIQK---LNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRV 66

Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           ++L  +    VA G   +F +S  G V+ +G   +  LG +   D +   H  +L  Q  
Sbjct: 67  RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ-- 124

Query: 318 TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPE 377
                   +VV IS         HT  LT+SG ++ FGAG  GQLG + +N++    NP 
Sbjct: 125 --------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSYGQLGHDSMNDEV---NPR 168

Query: 378 RV 379
           RV
Sbjct: 169 RV 170



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQ 205
           L+  L    ++Q++ G  + LALA   S    ++ G    G+LG G     +  P+ +  
Sbjct: 12  LIQKLNQQTILQVSCGNWHCLALA---SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS 68

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
            + + L  V  AAG  H+  +   G V  WG    G LG  +E+    P  V+ L   K 
Sbjct: 69  LEGIPLAQV--AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 126

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
           ++++ G+  T V+++ G V++FG G    LGH+++ D    R            L+ +  
Sbjct: 127 VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV----------LELMGS 176

Query: 326 RVVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLG 363
            V QI+         HT A    SG +YAFG G +GQLG
Sbjct: 177 EVTQIACGRQ-----HTLAFVPSSGLIYAFGCGARGQLG 210



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 11/224 (4%)

Query: 36  GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
             P   + L    I+Q + G    + ++  GQ + +GK+S G+   G +      SPQ V
Sbjct: 8   AVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPS-QASPQRV 66

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
            SL+ I + Q A G   +  LS  G V+ +   N  +LG   E  D E    +  L    
Sbjct: 67  RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-KDRESPCHVKLLRTQK 125

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           VV I+ G  +   L    SG  V++ G G  G+LGH S  DE +PR +   +L+  +   
Sbjct: 126 VVYISCGEEHTAVLT--KSG-GVFTFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQ 180

Query: 216 VAAGAWHA-AVVGQDGRVCTWGWGRYGCLGHG---NEECESVPK 255
           +A G  H  A V   G +  +G G  G LG G   N +C S  K
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 132/325 (40%), Gaps = 30/325 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +   AAG   T  ++ +G+V+ +G + FG+   G   T   ++P  V  L +  V   A 
Sbjct: 311 VTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGT--TTARSTPAAVSGLPS-GVETIAA 367

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G++ T  L   G V+ +   N  +LG  T      P  + G      V  IAAG  +  A
Sbjct: 368 GDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG--VTAIAAGGLHTCA 425

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    S   V+  G    G+LG GS TD   P  +     L      +AAG WH   +  
Sbjct: 426 LM---SSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSG---LASGVETIAAGGWHTCALTS 479

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSF 287
            G V  WG    G LG G+      P  V  L + V AI  A GDY T  ++  G V+ +
Sbjct: 480 SGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAI--AAGDYHTCALTGSGGVWCW 537

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G   S  LG     D          TP  V+ L      +             HT ALT 
Sbjct: 538 GYNLSGQLGDGTTTDRS--------TPVAVSGLTSGVTVIAAGRF--------HTCALTS 581

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTE 372
           SG ++ +GA   GQLG     N+T 
Sbjct: 582 SGGVWCWGANFDGQLGDGTTTNRTT 606



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 140/329 (42%), Gaps = 33/329 (10%)

Query: 37  TPLYCRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           TP+    L  G+  I  AAG   T  ++ +G V+ +G+++ G+   G   T    +P  V
Sbjct: 453 TPVAVSGLASGVETI--AAGGWHTCALTSSGGVWCWGRNNSGQ--LGDGSTIYHITPVAV 508

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
             L +  V   A G++ T  L+  G V+ + +    +LG  T  +   P  + G    + 
Sbjct: 509 SGLPS-GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVT 567

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  IAAG  +  AL    S   V+  G    G+LG G+ T+   P  +     L      
Sbjct: 568 V--IAAGRFHTCALT---SSGGVWCWGANFDGQLGDGTTTNRTTPVAVSG---LPSGVTA 619

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYT 274
           +AAG WH   +   G V  WG   YG LG G     S P  V  L + V AI  A G   
Sbjct: 620 IAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAI--AAGWEH 677

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T  ++  G+V+ +G      LG     DG      N  TP  V+ L      V  I+   
Sbjct: 678 TCALTSSGEVWCWGDNYYGQLG-----DGT---TTNRSTPGAVSGLP---SGVTAIAA-- 724

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +Y   HT ALT SG +  +G    GQLG
Sbjct: 725 GVY---HTCALTGSGGVMCWGNNGDGQLG 750



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 137/340 (40%), Gaps = 38/340 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQG+  I  AAG   T  ++ +G V  +G + FG+   G   T+  ++P  V  L +  V
Sbjct: 52  LQGVTAI--AAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTR--STPGAVSGLPS-GV 106

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIAA 161
              A GN+ T  L+  G V  +      +LG+        P    G +  +P  V  IAA
Sbjct: 107 TAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTP----GAVSGLPSGVTAIAA 162

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  +  AL    S   V   G    G+LG G+ T+ + P  +     L      +AAG  
Sbjct: 163 GGDHTCALM---SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSG---LPSGVTAIAAGGL 216

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
           H   +   G V  WG+  YG LG G      S P  V  L       +A G   T  +  
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMS 275

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
            G V+ +G  +S  LG  +  D          TP  V+ L      V  I+       + 
Sbjct: 276 SGGVWCWGRNDSGQLGDGSDTDSS--------TPVAVSGLP---SGVTAIAAG-----DY 319

Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           HT ALT SG+++ +G    GQLG       T R  P  V 
Sbjct: 320 HTCALTGSGEVWCWGGNGFGQLGD---GTTTARSTPAAVS 356



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 127/316 (40%), Gaps = 29/316 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +   AAG   T  ++ +G+V+ +G + +G+   G   T   ++P  V  L +     AA 
Sbjct: 208 VTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTT-TYSRSTPAAVGGLPSGMTAIAA- 265

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G   T  L   G V+ +   +  +LG  ++ +   P  + G      V  IAAG  +  A
Sbjct: 266 GGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG--VTAIAAGDYHTCA 323

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    SG      G G G +LG G+ T    P  +     L      +AAG +H   +  
Sbjct: 324 L--TGSGEVWCWGGNGFG-QLGDGTTTARSTPAAVSG---LPSGVETIAAGDYHTCALMS 377

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSF 287
            G V  WG    G LG G     S P  V  L + V AI  A G   T  +   G V+ +
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAI--AAGGLHTCALMSSGGVWCW 435

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G   S  LG  +  D          TP  V+ L    E +             HT ALT 
Sbjct: 436 GLNNSGQLGDGSDTDSS--------TPVAVSGLASGVETIAAGGW--------HTCALTS 479

Query: 348 SGKLYAFGAGDKGQLG 363
           SG ++ +G  + GQLG
Sbjct: 480 SGGVWCWGRNNSGQLG 495



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 138/327 (42%), Gaps = 30/327 (9%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           +   AAG   T  +  +G V+ +G ++ G+   G       ++P  V  L +  V   A 
Sbjct: 413 VTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSD--TDSSTPVAVSGLAS-GVETIAA 469

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G + T  L+  G V+ +   N  +LG  +    + P  + G      V  IAAG  +  A
Sbjct: 470 GGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYHTCA 527

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    SG  V+  G  L G+LG G+ TD   P  +     L     V+AAG +H   +  
Sbjct: 528 L--TGSG-GVWCWGYNLSGQLGDGTTTDRSTPVAVSG---LTSGVTVIAAGRFHTCALTS 581

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATGDYTTFVVSEDGDVYSF 287
            G V  WG    G LG G     + P  V  L + V AI  A G + T  ++  G+V+ +
Sbjct: 582 SGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAI--AAGGWHTCALTSSGEVWCW 639

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G      LG     DG      N  TP  V+ L      V  I+      W  HT ALT 
Sbjct: 640 GDNYYGQLG-----DGT---TTNRSTPGAVSGLP---SGVTAIAAG----WE-HTCALTS 683

Query: 348 SGKLYAFGAGDKGQLGIELVNNQTERG 374
           SG+++ +G    GQLG     N++  G
Sbjct: 684 SGEVWCWGDNYYGQLGDGTTTNRSTPG 710



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 96/223 (43%), Gaps = 22/223 (9%)

Query: 37  TPLYCRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
           TP+    L  G+ +I  AAG   T  ++ +G V+ +G +  G+   G   T   T+P  V
Sbjct: 555 TPVAVSGLTSGVTVI--AAGRFHTCALTSSGGVWCWGANFDGQLGDGT--TTNRTTPVAV 610

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLEN 153
             L +  V   A G + T  L+  G V+   WG++   +LG  T  N   P    G +  
Sbjct: 611 SGLPS-GVTAIAAGGWHTCALTSSGEVW--CWGDNYYGQLGDGTTTNRSTP----GAVSG 663

Query: 154 IP--VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
           +P  V  IAAG+ +  AL    S   V+  G    G+LG G+ T+   P  +     L  
Sbjct: 664 LPSGVTAIAAGWEHTCALT---SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG---LPS 717

Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
               +AAG +H   +   G V  WG    G LG G     + P
Sbjct: 718 GVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 19/250 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ ++++  + G   T L + +G++Y FG  +FG   +G + T  ++ P+ VESLK +  
Sbjct: 322 LQVVKLL--SCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRET--ISYPKEVESLKGLRT 377

Query: 104 VQAAIGNFFTAVL---------SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
           +  + G + TA +         +  G+++T+  G+  RLGH    + ++P   + +L + 
Sbjct: 378 ISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP-TCVPSLIDY 436

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
              +   G+   + L    SG  +++ G  + G+LG+ +  D ++PRL+E+ +L     V
Sbjct: 437 NFHKAVCGHTLTIGLTT--SGH-IFTAGSSVYGQLGNPN-NDGRYPRLVEE-KLGGGGVV 491

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            V  GA+H AV+ Q G V TWG G  G LGHG+      P  V+AL D     +A G   
Sbjct: 492 EVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGF 551

Query: 275 TFVVSEDGDV 284
           T  + +   V
Sbjct: 552 TAAICQHKSV 561



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 37/258 (14%)

Query: 124 TFSWGNDARLGHHTEPNDV-EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           T   G+D+     T   D+  P PL    E+  ++ ++   C +   A       V++ G
Sbjct: 231 TCRQGSDSNAYSATAATDILVPKPL----ESNVMLDVSYVACGVKHAALVTRQAEVFTWG 286

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ--PV------VVAAGAWHAAVVGQDGRVCT 234
               G+LGHG+ T    PRL+E   + N++  PV      +++ G WH A+    G++ T
Sbjct: 287 EECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYT 346

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE---------DGDVY 285
           +G G +G LGHGN E  S PK V++L  ++ I V+ G + T  V E          G ++
Sbjct: 347 FGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLF 406

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G G+   LGH       G+R ++ L P  V SL       +  +   ++  +  T  L
Sbjct: 407 TWGDGDKYRLGH-------GDR-SSKLKPTCVPSL-------IDYNFHKAVCGHTLTIGL 451

Query: 346 TESGKLYAFGAGDKGQLG 363
           T SG ++  G+   GQLG
Sbjct: 452 TTSGHIFTAGSSVYGQLG 469



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 38/301 (12%)

Query: 81  YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
           Y       +  P+ +ES   + V   A G    A+++R+  V+T  WG +   RLGH   
Sbjct: 241 YSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFT--WGEECSGRLGHGAG 298

Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALAC-------QPSGMAVYSVGCGLGGKLGH 191
            +  +P  L+ +L    V  +  G   +  L+C       + S   +Y+ G G  G LGH
Sbjct: 299 TSIFQPR-LVESLSICNVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGH 357

Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ---------DGRVCTWGWGRYGC 242
           G+R    +P+ +E   L  L+ + V+ G WH A V +          G++ TWG G    
Sbjct: 358 GNRETISYPKEVES--LKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYR 415

Query: 243 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 302
           LGHG+   +  P  V +L D        G   T  ++  G +++ G      LG N   D
Sbjct: 416 LGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLG-NPNND 474

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           G+         P+LV       E++    +   +    H   LT+SG++Y +G G  G+L
Sbjct: 475 GR--------YPRLV------EEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 520

Query: 363 G 363
           G
Sbjct: 521 G 521



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 33/287 (11%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK--NIFVVQAAI-- 108
           A G     L++   +V+ +G++  G   +G  GT +   P+LVESL   N+  +   +  
Sbjct: 267 ACGVKHAALVTRQAEVFTWGEECSGRLGHGA-GTSIF-QPRLVESLSICNVETLPVGLQV 324

Query: 109 ------GNFFTAVLSREGRVYTFSWGNDARLGHHTE-----PNDVEPHPLLGTLE-NIPV 156
                 G + TA+ +  G++YTF  G    LGH        P +VE    L T+  +  V
Sbjct: 325 VKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGV 384

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
              AA    ++A +   SG  +++ G G   +LGHG R+ +  P  +      N    V 
Sbjct: 385 WHTAAVVEVIMAQSNTSSG-KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVC 443

Query: 217 AAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
                H   +G    G + T G   YG LG+ N +      V + L     + V  G Y 
Sbjct: 444 G----HTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYH 499

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             V+++ G+VY++G G +  LGH  IAD +        TP  V +L+
Sbjct: 500 VAVLTQSGEVYTWGKGANGRLGHGDIADRK--------TPTFVEALR 538


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 32/295 (10%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           VYA+G +S    +    G+  +  P+ V+S  N  +++A  G + T  +S +G V +   
Sbjct: 286 VYAWGSNS--SHQLAELGSDKIVFPKKVKSFGNSQMLEA--GQYCTFAVSGDGCVRSCGK 341

Query: 128 GNDARLGHHTEPNDVEPHPLL----GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGC 183
           G+  RLG     N      ++     T+  I   + + G+     LA    G  ++S G 
Sbjct: 342 GSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGH----TLALTTEG-CIFSWGD 396

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           G  GKLGHGS    K P++IE   L     V V+AG  H+A V Q+G++ TWG G YG L
Sbjct: 397 GDYGKLGHGSSLTHKSPKIIEG-PLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRL 455

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGHNAIAD 302
           G G+    +VP +V+ +    A  V  G   T V+++DG  V+SFG G++  LGH     
Sbjct: 456 GLGDNTSRNVPVLVKDI--ASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGH----- 508

Query: 303 GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
           G  +R   V  P+++ S   +N  +       S Y    + AL +SG+++++G G
Sbjct: 509 GDTSR---VYRPKVIES---INGMMFYKLCAGSQY----SLALNDSGQVFSWGCG 553



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 25/313 (7%)

Query: 54  AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-F 112
           AG   T  +S  G V + GK S+G    G    +      + +  + I  + ++ G+   
Sbjct: 322 AGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGH 381

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           T  L+ EG ++++  G+  +LGH +      P  + G L    VV ++AGY +    AC 
Sbjct: 382 TLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHS---ACV 438

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG-R 231
                +++ G G  G+LG G  T    P L++           V  G+ H  V+ QDG  
Sbjct: 439 TQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIA----SAGSVVCGSSHTLVLAQDGLT 494

Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
           V ++G G  G LGHG+      PKV++++N +    +  G   +  +++ G V+S+GCG 
Sbjct: 495 VWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCG- 553

Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
            A LG        G+  A  + P L+  L     RVV I+       + H  ALT + ++
Sbjct: 554 -ACLGC-------GSPDATFMKPTLIDELTFT--RVVDIT-----SGDGHCMALTHNNEV 598

Query: 352 YAFGAGDKGQLGI 364
           Y +G    GQ G+
Sbjct: 599 YCWGNNAMGQCGL 611



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  +AG   +  ++  GQ++ +G+  +G    G   ++ V  P LV+ + +   V    
Sbjct: 425 VVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNV--PVLVKDIASAGSV--VC 480

Query: 109 GNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           G+  T VL+++G  V++F  G++ +LGH        P  ++ ++  +   ++ AG  Y L
Sbjct: 481 GSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPK-VIESINGMMFYKLCAGSQYSL 539

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           AL    SG  V+S GCG     G    T  K P LI++     +  V + +G  H   + 
Sbjct: 540 AL--NDSGQ-VFSWGCGACLGCGSPDATFMK-PTLIDELTFTRV--VDITSGDGHCMALT 593

Query: 228 QDGRVCTWGWGRYG-C-LGHGNEECESVPKVVQALNDVKAIHVATG 271
            +  V  WG    G C LGH N    SVP  VQ LN+V    ++ G
Sbjct: 594 HNNEVYCWGNNAMGQCGLGHTNSPI-SVPTQVQQLNNVTIHQISAG 638



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 11/147 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P    S+ G+   +  AG+  ++ ++D+GQV+++G    G              P L++ 
Sbjct: 517 PKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWG---CGACLGCGSPDATFMKPTLIDE 573

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 153
           L    VV    G+     L+    VY   WGN+A     LGH   P  V     +  L N
Sbjct: 574 LTFTRVVDITSGDGHCMALTHNNEVYC--WGNNAMGQCGLGHTNSPISVPTQ--VQQLNN 629

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYS 180
           + + QI+AG  + +A    PS   V S
Sbjct: 630 VTIHQISAGTSHSIAYTAMPSDRHVIS 656


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 16/282 (5%)

Query: 31  GREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG-EAEYGVQGTKLV 89
            R +  TP       GI I QA  G   T++++++G VY+ G D +G     G+ G+ ++
Sbjct: 524 NRAMYRTPKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVL 583

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           T P  +++L  + VV  A G+     L+  G VYT+  G   RLG   + ND     L+ 
Sbjct: 584 T-PIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQ-NDFNLPQLVT 641

Query: 150 TLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGC---GLGGKLGHGSRTDEKHPRLIEQ 205
             E    +V+I  G      L      +A  +  C    L   +     TD+   +    
Sbjct: 642 LPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVS 701

Query: 206 FQLL--------NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
           +  L        + + V +A+G  H+AVV + GR+ T+G   +G LG G+ +  + P +V
Sbjct: 702 YVTLPTPVRPLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLV 761

Query: 258 QALNDVKAIHVAT-GDYTTFVVSEDGDVYSFGCGESASLGHN 298
             L + K + +   GD  T V + D  ++S+GCGE+  LG N
Sbjct: 762 SGLLNGKEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLN 803



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 158/358 (44%), Gaps = 54/358 (15%)

Query: 50  IQAAAGAGRTMLISDAGQVYAF-----GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV 104
           I+ +AG     +++   ++Y +     G +  G+  +G +   +  +P+ V+    I + 
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRA--MYRTPKRVDFFTGIPIK 543

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLENIPVVQIA 160
           QA  G  FT +L+  G VY  S G+D       E     N + P  +   L  + VV IA
Sbjct: 544 QAVCGEDFTIILTESGDVY--SCGSDYYGCLGCEGIYGSNVLTPIKI-DALSKLKVVSIA 600

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI---EQFQLLNLQPVVVA 217
            G C+++AL    S   VY+ G G  G+LG G++ D   P+L+   E++  +    V + 
Sbjct: 601 CGDCHVVALTNIGS---VYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYI----VKIT 653

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLG-------HGNEECES---------VPKVVQALN 261
            G  +  ++  +G +  +G      L         GN +  S         +P  V+ L 
Sbjct: 654 CGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLR 713

Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
             + + +A+G   + VV E G + +FG   S + G   + D Q         P LV+ L 
Sbjct: 714 SYRIVSMASGKSHSAVVDEFGRLLTFG---SNTFGELGLGDYQSRNF-----PSLVSGL- 764

Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +N + V I      +    T   T   +++++G G+ G+LG+ L N  T+  +P+ +
Sbjct: 765 -LNGKEVTICNCGDNF----TVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPI 817



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 21/173 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
           + V+AG  H AVV  +  + TW     G    G L HGN      PK V     +     
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQA 545

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
             G+  T +++E GDVYS G      LG       +G   +NVLTP  + +L ++  +VV
Sbjct: 546 VCGEDFTIILTESGDVYSCGSDYYGCLG------CEGIYGSNVLTPIKIDALSKL--KVV 597

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            I+       + H  ALT  G +Y +G G+ G+LG+    NQ +   P+ V +
Sbjct: 598 SIACG-----DCHVVALTNIGSVYTWGNGEHGRLGL---GNQNDFNLPQLVTL 642


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 36/306 (11%)

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE--PHPLLG 149
           P  V+ L +  ++Q       +A ++ +G++YT  WG   R G  ++   +    + LL 
Sbjct: 122 PSPVQVLSDEDIIQVNASGDISAAVTSQGQIYT--WG-KTRGGSLSQQKSLSRATNLLLP 178

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG------SRTDEKHPRLI 203
           TL   P VQ     C    LA       + + G    GKLGH       S+     PR  
Sbjct: 179 TLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSY 238

Query: 204 EQFQLLNL--------QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
             +  +N         + +  + G  H A + QDG V TWG+G+ G LGHGN +   +PK
Sbjct: 239 ADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPK 298

Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
            V+ L+++  I     DY TF + +DG++YS+G      LG       Q N + + +  Q
Sbjct: 299 KVEGLSNIVKIDCGM-DY-TFALDKDGNIYSWGSNRYGQLGTT-----QSNINKHNVPIQ 351

Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
           L   L   +  VV IS         H+  L + G+ + +G G+ GQLG +    +T    
Sbjct: 352 L--QLPHGSSHVVDISCGEE-----HSAFLNDKGEAFIWGYGNDGQLGHK---EKTNLNQ 401

Query: 376 PERVDI 381
           P++++ 
Sbjct: 402 PKKLEF 407



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 25/213 (11%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           +L+  +IIQA+ G   T  ++  G+VY +G    G   +G      V  P+ VE L NI 
Sbjct: 250 ALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHG--NWDQVDLPKKVEGLSNI- 306

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV-VQIAA 161
            V+   G  +T  L ++G +Y  SWG++      T  +++  H       N+P+ +Q+  
Sbjct: 307 -VKIDCGMDYTFALDKDGNIY--SWGSNRYGQLGTTQSNINKH-------NVPIQLQLPH 356

Query: 162 GYCYLLALACQPSGMA-------VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
           G  +++ ++C     A        +  G G  G+LGH  +T+   P+ +E  + L     
Sbjct: 357 GSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTEPLRR--- 413

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
            V  G  H  V+   G++  +G GR G LG G+
Sbjct: 414 -VVCGGGHTGVITTAGKLFLFGRGRDGQLGRGD 445



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 15/138 (10%)

Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHV-ATGDYTTFVVSEDGDVY 285
           Q   + +WG G+ G LG+GNE    S+P  VQ L+D   I V A+GD +  V S+ G +Y
Sbjct: 95  QQKLLLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQ-GQIY 153

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
           ++G     SL          +R  N+L P L+ + +    + VQ++   +     H   +
Sbjct: 154 TWGKTRGGSLSQQKSL----SRATNLLLPTLIVAPE---VQFVQVACGKT-----HLAGV 201

Query: 346 TESGKLYAFGAGDKGQLG 363
           T+ GKL  +G  D+G+LG
Sbjct: 202 TKDGKLITWGNPDQGKLG 219


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 22/215 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QI  G  + LAL+    G  +++ G  L G+LG G +      P+++E   L 
Sbjct: 135 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 189

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            +    ++AG  H+  +   G + +WG   +G LG G+ E +  P +++AL++ +   +A
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLA 249

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   + ++++DG +++FG G+   LGHN+          N L P LV  L  V  RV Q
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGNRVTQ 299

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+      W  HT A +++ GK+++FG+G  GQLG
Sbjct: 300 IACGR---W--HTLAYVSDLGKVFSFGSGKDGQLG 329



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 25/270 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP   +  + ++I     GA   +++S  G+ +          EY     K +    +++
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF----------EYDNYSMKHLRFESILQ 136

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
             K   ++Q   G++ +  LS+ G +  F+WG +   +LG     P+   P  ++  L  
Sbjct: 137 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAG 190

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
           +P+ QI+AG  + +AL+   SG  +YS G    G+LG G    + +P LIE   L N + 
Sbjct: 191 VPLAQISAGEAHSMALSM--SG-NIYSWGKNEFGQLGLGHTESKDYPSLIEA--LDNQEV 245

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
             +A G  H+A++ QDG + T+G G++G LGH + + E  P +V  L   +   +A G +
Sbjct: 246 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRW 305

Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            T   VS+ G V+SFG G+   LG+    D
Sbjct: 306 HTLAYVSDLGKVFSFGSGKDGQLGNGGTRD 335



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ + Q +AG   +M +S +G +Y++GK+ FG+   G+  T+    P L+E
Sbjct: 181 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQL--GLGHTESKDYPSLIE 238

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   +A+L+++G ++TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 239 ALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGNRV 297

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   D+  P
Sbjct: 298 TQIACGRWHTLAYVSDLG--KVFSFGSGKDGQLGNGGTRDQLIP 339



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 16/221 (7%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  +IIQ   G   ++ +S  G+++A+G++  G+   G +     T+PQ+VE L  + +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLAGVPL 193

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHP-LLGTLENIPVVQI 159
            Q + G   +  LS  G +Y  SWG +   +LG  HTE  D   +P L+  L+N  V  +
Sbjct: 194 AQISAGEAHSMALSMSGNIY--SWGKNEFGQLGLGHTESKD---YPSLIEALDNQEVEFL 248

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  +  AL  Q  G+ +++ G G  G+LGH S  +E  P L+   +L+  +   +A G
Sbjct: 249 ACGGSH-SALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGNRVTQIACG 303

Query: 220 AWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
            WH  A V   G+V ++G G+ G LG+G    + +P  V+ 
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKV 344



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
           + +  G +H+  + + G +  WG   +G LG G +    + P++V+ L  V    ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200

Query: 273 YTTFVVSEDGDVYSFGCGE--SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
             +  +S  G++YS+G  E     LGH    D           P L+ +L   N+ V  +
Sbjct: 201 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKD----------YPSLIEALD--NQEVEFL 248

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           +   S     H+  LT+ G L+ FGAG  GQLG     N+
Sbjct: 249 ACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 283



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 25/155 (16%)

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           N++   V  GA H  ++  DG+        Y      +   ES+      L + K I + 
Sbjct: 96  NMKIHSVDQGAEHMLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQIT 144

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            GDY +  +S+ G+++++G      LG        G +  +  TPQ+V  L  V   + Q
Sbjct: 145 CGDYHSLALSKGGELFAWGQNLHGQLG-------VGRKFPSTTTPQIVEHLAGVP--LAQ 195

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
           IS        AH+ AL+ SG +Y++G  + GQLG+
Sbjct: 196 ISAGE-----AHSMALSMSGNIYSWGKNEFGQLGL 225


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 13/269 (4%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           ++L    I   A GA  ++ I+DAG++Y +G    G   +G    + V  P+ V SL   
Sbjct: 548 KALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAV--PRKVMSLLRE 605

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
            VV A+ G   TAVL+ +G V+TF  G + RLG         PHP++G  +   +  +  
Sbjct: 606 SVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVC 665

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGA 220
           G+ +  AL  Q S       G G  G LG+  R D+  PR +++ + +    VV VA G 
Sbjct: 666 GWNFTAALDRQGSVFTWGKTGEGQCG-LGYVDR-DQVVPRCVDKLRDVAGSSVVDVACGY 723

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV-----KAIHVATGDYTT 275
            H  V+   G + +WG G YG LG G+   + +P  VQ   D      +   V  G + +
Sbjct: 724 THTVVLTASGELYSWGLGEYGQLGTGD-VYQPLPARVQLPADALCAPDQLARVYCGAFHS 782

Query: 276 FVVSEDGDVYSFGCGE--SASLGHNAIAD 302
              +E   ++++G     +  LGH A  D
Sbjct: 783 IATTEQRVMFAWGLNSYGACGLGHTANKD 811



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 153/377 (40%), Gaps = 52/377 (13%)

Query: 36  GTPLYCRSLQ-----GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV------- 83
           GTPL  R        G  I+Q A G    + ++  G VY++G +   +            
Sbjct: 461 GTPLVLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTST 520

Query: 84  ----QGTKLVTS-----PQLVE------SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               + T++V++     P LVE      +L    +   A G   +  ++  G +YT+  G
Sbjct: 521 LPDNESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSG 580

Query: 129 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 188
            D RLGH    +   P  ++  L    VV  + G  +   L  + S   V++ G G  G+
Sbjct: 581 EDGRLGHGDMRDRAVPRKVMSLLRE-SVVSASCGGAHTAVLTAKGS---VFTFGRGRNGR 636

Query: 189 LGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN- 247
           LG G       P  I  F       +VV    + AA+  Q G V TWG    G  G G  
Sbjct: 637 LGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQ-GSVFTWGKTGEGQCGLGYV 695

Query: 248 EECESVPKVVQALNDV---KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
           +  + VP+ V  L DV     + VA G   T V++  G++YS+G GE   LG        
Sbjct: 696 DRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG-------- 747

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLG 363
                +V  P L   ++   + +        +Y  A H+ A TE   ++A+G    G  G
Sbjct: 748 ---TGDVYQP-LPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACG 803

Query: 364 IELVNNQTERGNPERVD 380
           +    N   +  PER+D
Sbjct: 804 LGHTAN---KDKPERID 817



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 138/344 (40%), Gaps = 49/344 (14%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
            + +++   G   T +   +  +Y +G+    E      GT LV  P+ V       +VQ
Sbjct: 427 AVDVVELEEGDDATQVEEPSSCMYVWGRPPSLEG-----GTPLVLRPKHVSLANGQPIVQ 481

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLG-----HHTE------------------PNDV 142
            A G      L+  G VY++    D ++       HT                   P+ V
Sbjct: 482 VACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLV 541

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           E   L   L    +  +A G  + LA+        +Y+ G G  G+LGHG   D   PR 
Sbjct: 542 EELALEKALHRTTIAMVACGAQHSLAIT---DAGELYTWGSGEDGRLGHGDMRDRAVPRK 598

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           +    LL    V  + G  H AV+   G V T+G GR G LG G+ +    P  +     
Sbjct: 599 V--MSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQ 656

Query: 263 VKAIH-VATGDYTTFVVSEDGDVYSFG-CGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
             +I  V  G   T  +   G V+++G  GE           G G    + + P+ V  L
Sbjct: 657 GTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQC--------GLGYVDRDQVVPRCVDKL 708

Query: 321 KQV-NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           + V    VV ++   +     HT  LT SG+LY++G G+ GQLG
Sbjct: 709 RDVAGSSVVDVACGYT-----HTVVLTASGELYSWGLGEYGQLG 747



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 19/262 (7%)

Query: 35  NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ- 93
              P    SL    ++ A+ G   T +++  G V+ FG+   G    G+   K   +P  
Sbjct: 593 RAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGR--LGLGDNKWRDTPHP 650

Query: 94  LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPL--LGT 150
           +V   +   +     G  FTA L R+G V+T+    + + G  + + + V P  +  L  
Sbjct: 651 IVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRD 710

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-- 208
           +    VV +A GY + + L    SG  +YS G G  G+LG G   D   P L  + QL  
Sbjct: 711 VAGSSVVDVACGYTHTVVLTA--SG-ELYSWGLGEYGQLGTG---DVYQP-LPARVQLPA 763

Query: 209 ----LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
                  Q   V  GA+H+    +   +  WG   YG  G G+   +  P+ +   +   
Sbjct: 764 DALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQT 823

Query: 265 AIHVATGDYTTFVVSEDGDVYS 286
            + VA G   T  +  +  +Y+
Sbjct: 824 ELVVACGHKYTIALEVNASLYT 845


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 15/233 (6%)

Query: 63  SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
           +D+  VYA+G +S  +   G   ++ +  P+LV +   +  ++A  G + T V+  +G V
Sbjct: 355 ADSCVVYAWGSNSSHQLAEGT--SEKILQPKLVTNFPKVQQLEA--GQYCTFVIDNDGAV 410

Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC---YLLALACQPSGMAVY 179
                G+  RLG     N   P  L     ++ V +I++      + LAL  +    A++
Sbjct: 411 SACGKGSYGRLGLGDSSNQTAPKKLSFDATHL-VKKISSSKGSDGHTLALTVEG---ALF 466

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           S G G  GKLGHG+ + +K+P+LI Q  L       + AG  H+A V +DG++ TWG G 
Sbjct: 467 SWGDGDYGKLGHGNISTQKYPKLI-QGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGD 525

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGE 291
           +G LGHG+    +VP +V+ +++V    VA G   T  VS+DG  V++FG G+
Sbjct: 526 FGRLGHGDNSGRNVPTLVKDISNVG--QVACGSSHTIAVSQDGRTVWTFGGGK 576



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 35/251 (13%)

Query: 125 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ-IAAG-YCYLLALACQPSGMAVYS 180
           ++WG+++  +L   T    ++P      + N P VQ + AG YC  +      +  AV +
Sbjct: 361 YAWGSNSSHQLAEGTSEKILQPK----LVTNFPKVQQLEAGQYCTFVI----DNDGAVSA 412

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGWGR 239
            G G  G+LG G  +++  P+ +       ++ +  + G+  H   +  +G + +WG G 
Sbjct: 413 CGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGD 472

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT-TFVVSEDGDVYSFGCGESASLGHN 298
           YG LGHGN   +  PK++Q     K +      Y  +  V+EDG +Y++G G+   LGH 
Sbjct: 473 YGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGH- 531

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK-LYAFGAG 357
              D  G        P LV  +  V     Q++  +S     HT A+++ G+ ++ FG  
Sbjct: 532 --GDNSGRN-----VPTLVKDISNVG----QVACGSS-----HTIAVSQDGRTVWTFGG- 574

Query: 358 DKGQLGIELVN 368
             G+LG E  N
Sbjct: 575 --GKLGFEDAN 583



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 25/191 (13%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTW 235
           VY+ G     +L  G+      P+L+  F      P V  + AG +   V+  DG V   
Sbjct: 360 VYAWGSNSSHQLAEGTSEKILQPKLVTNF------PKVQQLEAGQYCTFVIDNDGAVSAC 413

Query: 236 GWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGES 292
           G G YG LG G+   ++ PK +   A + VK I  + G D  T  ++ +G ++S+G G+ 
Sbjct: 414 GKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDY 473

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH  I+  +         P+L+     +  +VV+           H+ A+TE G+LY
Sbjct: 474 GKLGHGNISTQK--------YPKLIQG--PLAGKVVKCICAG----YRHSAAVTEDGQLY 519

Query: 353 AFGAGDKGQLG 363
            +G GD G+LG
Sbjct: 520 TWGEGDFGRLG 530


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 153/354 (43%), Gaps = 52/354 (14%)

Query: 35   NGTPL----YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
            N +P+    + R L+  R++Q A G   T LI+D   +Y FG    G   +G Q  +  T
Sbjct: 1729 NASPIRMASFPRPLR--RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQ--EDCT 1784

Query: 91   SPQLVESLKNIF---------VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
             P  V    ++          VV+ + G   T  ++  G ++ F WG   RLG     + 
Sbjct: 1785 EPVSVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSS 1844

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            + P   +  L+NI  V  A G  + LAL  +     V++ G G GG+LG+GS TDE+ P 
Sbjct: 1845 LYP-TRVTDLQNIAAV--ACGREHTLALTRKGR---VFAFGAGFGGRLGNGSETDEELPF 1898

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV---- 257
             ++  +  + +   + AG  H+  +  +G V TWG+G  G LGHG+ +    P+ +    
Sbjct: 1899 AVQGLE--DYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPW 1956

Query: 258  ----------QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
                      QA        +A G Y T   + DG +Y +G   +  L    I   +   
Sbjct: 1957 TGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPE--- 2013

Query: 308  HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL-TESGKLYAFGAGDKG 360
               VLTPQ +        RV   S   S+     T A+ T  G L+ +G+   G
Sbjct: 2014 -MVVLTPQRI--------RVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAG 2058



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 126/279 (45%), Gaps = 26/279 (9%)

Query: 103  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
            VVQ A G   TA+++ +  +YTF  G   RLGH  + +  EP  + G   ++   +    
Sbjct: 1745 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSV-GYFTSLIEAEGVDV 1803

Query: 163  YCYLLALACQPSGMAV------YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
               +     +   MAV      +  G G  G+LG G      +P  +   Q +      V
Sbjct: 1804 GGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNI----AAV 1859

Query: 217  AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            A G  H   + + GRV  +G G  G LG+G+E  E +P  VQ L D +   +  G+  + 
Sbjct: 1860 ACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSC 1919

Query: 277  VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV------TSLKQVNERVVQI 330
             +S +GDV ++G G S +LGH       G+R  N L P+ +       ++     +  + 
Sbjct: 1920 ALSTEGDVLTWGFGSSGALGH-------GDRD-NCLEPRRIEGPWTGNAIDGEENQASET 1971

Query: 331  SLTNSIYWNA-HTFALTESGKLYAFGAGDKGQLGIELVN 368
            S+ ++I   + HT A T  G LY +G    GQL +E + 
Sbjct: 1972 SVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYIT 2010



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 21/228 (9%)

Query: 25   GKRNLLGREVNGTPLYCRSLQGIRIIQAAA-GAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
            G+   LG    G+ LY   +  ++ I A A G   T+ ++  G+V+AFG    G    G 
Sbjct: 1831 GEAGRLGTGETGSSLYPTRVTDLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGS 1890

Query: 84   QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
            +  + +  P  V+ L++  +     G   +  LS EG V T+ +G+   LGH    N +E
Sbjct: 1891 ETDEEL--PFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLE 1948

Query: 144  PHPLLGTL-------------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            P  + G               E   V  IA G  + LA     S  A+Y  G    G+L 
Sbjct: 1949 PRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAAT---SDGALYGWGDAAAGQLS 2005

Query: 191  HGSRTDEKHPRLIEQFQLLNLQPVV--VAAGAWHAAVVGQDGRVCTWG 236
                T  +   L  Q   +     +  VA G + +AV    G +  WG
Sbjct: 2006 VEYITAPEMVVLTPQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWG 2053



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 264  KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
            + + +A G   T ++++D  +Y+FG GE   LGH     G        ++    TSL + 
Sbjct: 1744 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGH-----GNQEDCTEPVSVGYFTSLIEA 1798

Query: 324  NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                V   +  S     HT A+T SG L+ FG G+ G+LG
Sbjct: 1799 EGVDVGGVVEVSC-GREHTMAVTASGDLFGFGWGEAGRLG 1837


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 21/223 (9%)

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           N   P  L G+ E +  V++A G  + LAL        VYS G G  G LGHG+      
Sbjct: 22  NSPLPRFLRGSRE-LLFVRVACGSSHTLALTGSGD---VYSFGQGTFGALGHGTTESCSS 77

Query: 200 PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
           P +++   L  L  V +A G  H+  +  +G++ +WG G+YG LG G+ E    P  V A
Sbjct: 78  PVIVDS--LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTA 135

Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTS 319
           L+D     V  G   T  +  DG ++S+G G     GH            N+L P+LV S
Sbjct: 136 LSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGT--------QDNILVPKLVCS 187

Query: 320 LKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           L+  N+ +VQ S         H  ALT  G +YA+G  ++GQ+
Sbjct: 188 LE--NDNIVQASAGAR-----HAVALTSGGGVYAWGDNEQGQV 223



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 8/199 (4%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P + R  + +  ++ A G+  T+ ++ +G VY+FG+ +FG   +G   T+  +SP +V+S
Sbjct: 26  PRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGT--TESCSSPVIVDS 83

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  + +VQ A G+  +  L+ EG+++++  G   +LG  +  N ++P P+   L +  + 
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVT-ALSDRLLT 142

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
           Q+  G  Y +A+    S   ++S G G  G+ GHG++ +   P+L+   +  N+  V  +
Sbjct: 143 QVVCGADYTMAI---DSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNI--VQAS 197

Query: 218 AGAWHAAVVGQDGRVCTWG 236
           AGA HA  +   G V  WG
Sbjct: 198 AGARHAVALTSGGGVYAWG 216



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 20/189 (10%)

Query: 178 VYSVGCGLGGKLGHGSRT---DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           + S GCG  G+LG        +   PR +   + L    V VA G+ H   +   G V +
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLF--VRVACGSSHTLALTGSGDVYS 58

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +G G +G LGHG  E  S P +V +L  +  + +A GD  +  ++ +G ++S+G G+   
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQ 118

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG  ++         N L P  VT+L   ++R+    LT  +    +T A+   G+L+++
Sbjct: 119 LGCGSV--------ENHLQPVPVTAL---SDRL----LTQVVCGADYTMAIDSDGQLFSW 163

Query: 355 GAGDKGQLG 363
           G G  GQ G
Sbjct: 164 GHGHWGQTG 172



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 9/168 (5%)

Query: 18  DIINERNGKRNLLGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD 74
           D+ +   G    LG    E   +P+   SL G+ I+Q A G   +  ++  GQ++++G+ 
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 75  SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
            +G+   G     L   P  V +L +  + Q   G  +T  +  +G+++++  G+  + G
Sbjct: 115 KYGQLGCGSVENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTG 172

Query: 135 HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           H T+ N + P  L+ +LEN  +VQ +AG  + +AL    SG  VY+ G
Sbjct: 173 HGTQDNILVP-KLVCSLENDNIVQASAGARHAVALT---SGGGVYAWG 216



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 18/142 (12%)

Query: 234 TWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           +WG G +G LG  +        +P+ ++   ++  + VA G   T  ++  GDVYSFG G
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
              +LGH            +  +P +V SL  +   +VQI+  ++     H+ ALT  G+
Sbjct: 63  TFGALGHGTTE--------SCSSPVIVDSLWGLG--IVQIACGDN-----HSCALTVEGQ 107

Query: 351 LYAFGAGDKGQLGIELVNNQTE 372
           L+++G G  GQLG   V N  +
Sbjct: 108 LFSWGRGKYGQLGCGSVENHLQ 129


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 35/284 (12%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-AEYGVQGTK 87
           LG   N T P    +L    II    G   ++ ++ AG V+ +G +  G+  +  V+ T+
Sbjct: 175 LGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTR 234

Query: 88  L---------------------------VTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
           +                            T P LV  L+ I +     G   T +LS  G
Sbjct: 235 MNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARG 294

Query: 121 RVYTFSWGNDARLGHHTEPND--VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
            VY+F       LG  +E      +P  +  T  N  + Q+++G  + L L    SG  V
Sbjct: 295 NVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLT---SGGNV 351

Query: 179 YSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           YS G G  G+LG G  T  +  P L++ F    ++ V VAAG  H+  +   GRV TWG 
Sbjct: 352 YSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGN 411

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           G  G LGHGNE  E++PK +   +    I +  G   + V+ ++
Sbjct: 412 GSNGKLGHGNESDENLPKQINFFSHSNVIDIFAGIDNSLVLIKE 455



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 44/312 (14%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L+   + +   G   T++++  G+V  FG+++FG+   G+  T+  T+P  VE+
Sbjct: 132 PTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQ--LGLGDTRNRTAPTPVET 189

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND------------ARLGHHTEPNDVEPH 145
           L N  ++   +G   +  +++ G V  F WG +             R+   TE  D E  
Sbjct: 190 LNNQHIIDIGVGLDHSIAVTKAGHV--FGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEE 247

Query: 146 -------------------PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
                               L+  LE I +  +  GY     L+ + +   VYS G    
Sbjct: 248 GGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGN---VYSFGSNEI 304

Query: 187 GKLGHGSRTDEK--HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           G LG GS    +   P  I +F   N +   +++GA H   +   G V + GWG  G LG
Sbjct: 305 GTLGLGSELKGRVTKPTKI-KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLG 363

Query: 245 HGNEEC-ESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            G +      P +++  N   +K + VA G   +  + + G VY++G G +  LGH   +
Sbjct: 364 LGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNES 423

Query: 302 DGQGNRHANVLT 313
           D    +  N  +
Sbjct: 424 DENLPKQINFFS 435



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 64/344 (18%)

Query: 47  IRIIQAAAGAGRTMLISD---------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           ++I Q  +    + L++D         + +VY +G +  G      +  +    P  ++ 
Sbjct: 81  LKIKQFGSSWLNSFLLTDEQNENDPTISNKVYMWGTNKSGNMSLPSEQYRF---PTTIDL 137

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           LKN FV +   G  FT VL+R+G+V  F   N  +LG     N   P P + TL N  ++
Sbjct: 138 LKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDTRNRTAPTP-VETLNNQHII 196

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            I  G  +  ++A   +G  V+  G  + G++G          +++E  ++ +   V+  
Sbjct: 197 DIGVGLDH--SIAVTKAG-HVFGWGYNVEGQIGQ---------KVVEYTRMNSTTEVM-- 242

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-----ESVPKVVQALNDVKAIHVATGD 272
                      DG          G  G   E+       ++P +V  L  +K  +V  G 
Sbjct: 243 -----------DGE-------EEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGY 284

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
            +TF++S  G+VYSFG  E  +LG  +   G+      V  P  +    + NE++ Q+S 
Sbjct: 285 DSTFLLSARGNVYSFGSNEIGTLGLGSELKGR------VTKPTKI-KFTETNEKIKQLSS 337

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
             S     HT  LT  G +Y+ G G +G+LG+ +  + + R +P
Sbjct: 338 GAS-----HTLFLTSGGNVYSCGWGTEGRLGLGM--DTSNRDSP 374


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV   Q+  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-QIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G     N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 VNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  VV   + +  I      +T+
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTS 322

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 323 AAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G    + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                 G G    N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 L-----GSG---GNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 306

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               I  + A      +A  ++ G VY   WG
Sbjct: 307 K-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 36/332 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  AAG   ++ +   G V+A+G +  G+   G    +L  +P  V  L+ +  V A +
Sbjct: 201 VVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL--APTQVSQLQGVSAVTAGL 258

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
             +    L  +G V+ +   +  ++G  T  +   P  +        V    AG   LL 
Sbjct: 259 --YHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLL- 315

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
                    V++ G    G+LG G+  D   P  +     +      +AAG  HA V+  
Sbjct: 316 -----DDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLGAVT----SLAAGTQHAVVLRA 366

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG + TWG G  G LGHG+ E    P+VV  L++V +  VA+G + +     DG V+++G
Sbjct: 367 DGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWG 424

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
              +  LG     +    RH  V  P L          VV +S +       H+FAL   
Sbjct: 425 RNTNGQLGDGTTTE----RHLPVRVPGL--------SGVVSVSASGH-----HSFALRSD 467

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           G ++ +G   +GQ+G        +R +P RV+
Sbjct: 468 GTVWGWGRNAQGQMGD---GTTKDRASPARVE 496



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 41/300 (13%)

Query: 76   FGEAEYGVQ----GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
             G+AE G      G KL +S  LV +      V  +  +   A L  +G V T+    D 
Sbjct: 1081 LGDAESGPSLEPVGVKLPSSKVLVPA------VSVSAWHQHAAALLADGTVQTWGGNADG 1134

Query: 132  RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
            +LG  T  +   P  + G      +V +A    + LAL    +   V++ G    G+LG 
Sbjct: 1135 QLGDGTTESRATPITVAGLGA---MVAVAPAARHTLALRSDGT---VWAWGDNTFGQLGD 1188

Query: 192  GSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
            GS T    P      Q++ L+ V  +AAG++H+  V +DG V  WG+  +G LG G  + 
Sbjct: 1189 GSNTRRTLP-----VQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA 1243

Query: 251  ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
             +VP  +  L+   A+ VA G+Y + ++  DG +++ G      LG             N
Sbjct: 1244 RAVPTRMLGLD--GAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTF--------TN 1293

Query: 311  VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             L+P  V  L QV  R V+           H+ AL E G ++ +G   +GQLG   V  +
Sbjct: 1294 RLSPFQVVELDQV--RTVRAG-------GYHSVALREDGTVWTWGHNGQGQLGDGTVTTR 1344



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 146/329 (44%), Gaps = 39/329 (11%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+   S+   + + AA  AG  +L+ D G V+A+G +S G+   G        SP  V 
Sbjct: 291 SPVQVTSIARAKAV-AAQDAGSLVLLDDGG-VFAWGLNSQGQLGIGTT----ADSPLPVR 344

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
                 V   A G     VL  +G ++T+  G   +LGH +    + P  ++  L N  V
Sbjct: 345 VRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE-VVTRLSN--V 401

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
             +A+G  + +A     S   V++ G    G+LG G+ T+   P  +     +    V V
Sbjct: 402 ASVASGSFHSVAALSDGS---VWTWGRNTNGQLGDGTTTERHLPVRVPGLSGV----VSV 454

Query: 217 AAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
           +A   H+  +  DG V  WGWGR   G +G G  +  + P  V+ L+ VKA+  A+G   
Sbjct: 455 SASGHHSFALRSDGTV--WGWGRNAQGQMGDGTTKDRASPARVEGLSSVKAL--ASGGSH 510

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
              +  DG V+++G   +  LG     D    R A    P  VT L  V       S+  
Sbjct: 511 MVALRTDGTVWTWGYNGAGQLGDGTTTD----RRA----PVQVTGLSGVT------SVAA 556

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
             Y    + AL   G ++A+G G +GQLG
Sbjct: 557 GAY---FSLALRTDGTVWAWGDGFEGQLG 582



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 34/315 (10%)

Query: 51  QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 110
           + AAGA  ++ ++ AG V+A+G +  G+   G    + V + Q V  L ++  +  A G+
Sbjct: 52  KVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQ-VPGLTDVTSI--AAGD 108

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
             +  L  +  V+T+   N  ++G  T  +   P  + G  +   VV +AAG  + LAL 
Sbjct: 109 AHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD---VVAVAAGEFHSLALR 165

Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQD 229
              +   V++ G    G+LG G       P      Q++ L  VV +AAG   +  V  D
Sbjct: 166 ADGT---VWAWGSNFYGQLGRGHSQPGPSP-----AQVVGLTGVVALAAGFDFSLAVRSD 217

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
           G V  WG    G LG G       P  V  L  V A  V  G Y    +  DG V+++G 
Sbjct: 218 GTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGS 275

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
             S  +G     D          +P  VTS+ +      Q         +A +  L + G
Sbjct: 276 NSSGQMGDGTWTD--------RPSPVQVTSIARAKAVAAQ---------DAGSLVLLDDG 318

Query: 350 KLYAFGAGDKGQLGI 364
            ++A+G   +GQLGI
Sbjct: 319 GVFAWGLNSQGQLGI 333



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 29/224 (12%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           V  IAAG  + LAL    +   V++ G    G++G G+  D   P+ +     +    V 
Sbjct: 101 VTSIAAGDAHSLALRADRT---VWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDV----VA 153

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VAAG +H+  +  DG V  WG   YG LG G+ +    P  V  L  V A+  A G   +
Sbjct: 154 VAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVAL--AAGFDFS 211

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V  DG V+++G   S  LG     DG    +   L P  V+ L+ V+      ++T  
Sbjct: 212 LAVRSDGTVWAWGANGSGQLG-----DGT---YIQRLAPTQVSQLQGVS------AVTAG 257

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           +Y   H  AL   G ++A+G+   GQ+G       T+R +P +V
Sbjct: 258 LY---HALALRSDGTVWAWGSNSSGQMGD---GTWTDRPSPVQV 295



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 144/344 (41%), Gaps = 41/344 (11%)

Query: 33   EVNGTPLYCRSLQGIRIIQAAAGAGR-TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
            E   TP+   ++ G+  + A A A R T+ +   G V+A+G ++FG+   G    +  T 
Sbjct: 1142 ESRATPI---TVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRR--TL 1196

Query: 92   PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 151
            P  V  L+ +  +  A G++ +  +  +G V+ + +    +LG  T      P  +LG L
Sbjct: 1197 PVQVVGLEKVTAI--AAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLG-L 1253

Query: 152  ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    V +A G  + L L    +   +++ G    G+LG G+ T+   P     FQ++ L
Sbjct: 1254 DG--AVAVAGGEYHSLMLRFDGT---LWATGNNSHGQLGEGTFTNRLSP-----FQVVEL 1303

Query: 212  QPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
              V  V AG +H+  + +DG V TWG    G LG G      VP  V  L  + +  V  
Sbjct: 1304 DQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLTAIAS--VGA 1361

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            G   TF V    + +++G      LG    +D         L P LV  L  V   +   
Sbjct: 1362 GTSHTFAVGS--ETWAWGRNSHGQLGTGDSSD--------RLEPTLVKGLHGVKSVLAGG 1411

Query: 331  SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
                       + A    G   ++G    G LGI L   +T  G
Sbjct: 1412 DF---------SVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPG 1446



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 142/367 (38%), Gaps = 60/367 (16%)

Query: 37   TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            +P+  R+L   R   A+AG   +++++  G V+++G +S  + + G  G      P  VE
Sbjct: 791  SPVLARNLPCARA--ASAGRQHSLVLACDGTVWSWGGNS--QGQLGDGGVTSRAYPAKVE 846

Query: 97   SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
             L  +  V A  G   + VL  +G V+T+      +LG  T  +   P      LE   +
Sbjct: 847  GLWGVVAVLA--GGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASP------LEVKGL 898

Query: 157  VQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP-RLIEQFQLLNLQPV 214
              IA G      AL     G  V++ G    G+LG G+ T    P R+      +N    
Sbjct: 899  AGIATGVMGEAHALVVSQDGT-VWAWGANGRGQLGDGTTTSSASPVRVAGLSAAMN---- 953

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
             V+ G  ++  V  DG V +WG    G LG G     + PK VQ L DVKA  V  G + 
Sbjct: 954  -VSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKA--VTAGAHH 1010

Query: 275  TFVVSEDGDVYSFGCGESASLGH----------------NAIADGQGNRHANVLT----- 313
               V  DG V+ +G      +G                 NA+    G +H+  L      
Sbjct: 1011 VVAVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAVETSAGEQHSLALLGDERA 1070

Query: 314  -----------------PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                             P L     ++    V +   +   W+ H  AL   G +  +G 
Sbjct: 1071 LSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGG 1130

Query: 357  GDKGQLG 363
               GQLG
Sbjct: 1131 NADGQLG 1137



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 24/236 (10%)

Query: 28   NLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
            N+ G+  +GT      P     L G   +  A G   ++++   G ++A G +S G+   
Sbjct: 1231 NVFGQLGDGTMDARAVPTRMLGLDGA--VAVAGGEYHSLMLRFDGTLWATGNNSHGQLGE 1288

Query: 82   GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
            G    +L  SP  V  L  +  V+A  G + +  L  +G V+T+      +LG  T    
Sbjct: 1289 GTFTNRL--SPFQVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTVTTR 1344

Query: 142  VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
              P P+ G      +  + AG  +  A+  +      ++ G    G+LG G  +D   P 
Sbjct: 1345 RVPAPVPGL---TAIASVGAGTSHTFAVGSE-----TWAWGRNSHGQLGTGDSSDRLEPT 1396

Query: 202  LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
            L++    +      V AG   +   G DG   +WG   +G LG G     +VP  V
Sbjct: 1397 LVKGLHGVK----SVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPGAV 1448



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 142/344 (41%), Gaps = 40/344 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+    L G+  +  AAGA  ++ +   G V+A+G D F E + G        SP  V  
Sbjct: 542 PVQVTGLSGVTSV--AAGAYFSLALRTDGTVWAWG-DGF-EGQLGDGAGVQRASPVQVTG 597

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L    VV+ A G      +  +G V+ +    + ++G  +  +      + G      V 
Sbjct: 598 LTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGL---TGVS 652

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VV 216
            +  G  + +ALA   +   + + G    G+ G G  T    PR++    +  L  + ++
Sbjct: 653 SVVGGLYHSMALAQDGT---LRAWGGNAYGQFGDGGVT----PRVVAG-AVPGLSGIKLL 704

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
            A   H   V +DG + TWG+ R+G LG G     S+P  V+ L   +   ++ G   + 
Sbjct: 705 GASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSL 762

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           +V  DG V ++G   S  LG  +      +R + VL   L  +      R          
Sbjct: 763 LVRADGTVLAWGQNTSGQLGDGSTT----HRASPVLARNLPCARAASAGR---------- 808

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
               H+  L   G ++++G   +GQLG   V   T R  P +V+
Sbjct: 809 ---QHSLVLACDGTVWSWGGNSQGQLGDGGV---TSRAYPAKVE 846



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 21/175 (12%)

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G  S  +  HP      Q L      VAAGA H+  V Q G V  WG    G LG G+  
Sbjct: 28  GTSSPAEPSHPPAARS-QALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVS 86

Query: 250 CES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
            +  V + V  L DV +I  A GD  +  +  D  V+++G       G+NA   G G  +
Sbjct: 87  FQRVVAQQVPGLTDVTSI--AAGDAHSLALRADRTVWTWG-------GNNAGQVGDGT-N 136

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +  TPQ V  L  V      +++    +   H+ AL   G ++A+G+   GQLG
Sbjct: 137 VDRPTPQKVPGLSDV------VAVAAGEF---HSLALRADGTVWAWGSNFYGQLG 182


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 149/339 (43%), Gaps = 28/339 (8%)

Query: 50   IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAA 107
            I   +GA R+  I D G+++A+G +  G    G    +    P LV+  SL +  V   A
Sbjct: 1487 ISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDR--NRPVLVDLASLGSSKVTAVA 1544

Query: 108  IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYC 164
             G +   VL  + R++ +    D +LG  T  N   P P+   LE +    V  + AG  
Sbjct: 1545 AGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDF 1604

Query: 165  YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAA 224
            + + L        ++  G    G+LG G+ T +  P L++   L   + + V+AG  H  
Sbjct: 1605 HSIILDDLGR---LWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTV 1661

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDG 282
             + + G +  WG    G LG G+      P  V   +L+  K + ++ G + T  + E G
Sbjct: 1662 ALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELG 1721

Query: 283  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
             ++++G  ES  LG         N+H  V        L  +N R V      S Y+    
Sbjct: 1722 RLWAWGPNESGLLGDGTTI----NQHRPVQ-----VDLTPLNGRKVVAVSAGSFYF---- 1768

Query: 343  FALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            F + + G+L+A+G+   GQLG      +T R  P RVD+
Sbjct: 1769 FVVDDRGELWAWGSNSYGQLGD---GTKTRRLKPVRVDM 1804



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 39/356 (10%)

Query: 39   LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL 98
            L C ++ G +  + AAG+  ++++ +  +++++G +  G    G    +  T P L +  
Sbjct: 1421 LSCFTVTGDKN-RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDR--TRPVLTDLT 1477

Query: 99   ----KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLEN 153
                  +  +    G   +  +  +GR++ + +     LG  T  +   P  + L +L +
Sbjct: 1478 PLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGS 1537

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              V  +AAG  + L L  Q     +++ G    G+LG G+RT+  +P  I+    ++L+P
Sbjct: 1538 SKVTAVAAGRYHNLVLDDQSR---LWAWGHNGDGQLGDGTRTNVAYPLPIQ----VDLEP 1590

Query: 214  VV------VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKA 265
            +       V AG +H+ ++   GR+  WG  +YG LG G    ++ P +V    LN  K 
Sbjct: 1591 LAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKV 1650

Query: 266  IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
            + V+ G++ T  + E G ++++G  +S  LG  +  D    RH  V     +TSL     
Sbjct: 1651 MAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTD----RHRPVQVD--LTSLD--GH 1702

Query: 326  RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
            +VV IS      WN  T AL E G+L+A+G  + G LG     NQ     P +VD+
Sbjct: 1703 KVVAISAGG---WN--TVALDELGRLWAWGPNESGLLGDGTTINQHR---PVQVDL 1750



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 20/265 (7%)

Query: 43   SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV--ESLKN 100
            SL   ++   AAG    +++ D  +++A+G +  G+   G +       P  V  E L  
Sbjct: 1534 SLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAG 1593

Query: 101  IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGHHTEPNDVEPHPLLGTLEN 153
              V     G+F + +L   GR++   WG        D    + T P  V+  PL G    
Sbjct: 1594 STVTGVWAGDFHSIILDDLGRLWV--WGKNKYGELGDGTTTYQTRPVLVDLLPLNGR--- 1648

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
              V+ ++AG  + +AL  Q     +++ G    G+LG GS TD   P  ++   L   + 
Sbjct: 1649 -KVMAVSAGEHHTVALDEQ---GGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKV 1704

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ--ALNDVKAIHVATG 271
            V ++AG W+   + + GR+  WG    G LG G    +  P  V    LN  K + V+ G
Sbjct: 1705 VAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAG 1764

Query: 272  DYTTFVVSEDGDVYSFGCGESASLG 296
             +  FVV + G+++++G      LG
Sbjct: 1765 SFYFFVVDDRGELWAWGSNSYGQLG 1789



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 8/208 (3%)

Query: 44   LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNI 101
            L G  +    AG   ++++ D G+++ +GK+ +GE   G   T   T P LV+   L   
Sbjct: 1591 LAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGT--TTYQTRPVLVDLLPLNGR 1648

Query: 102  FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIA 160
             V+  + G   T  L  +G ++ +   +  RLG  +  +   P  + L +L+   VV I+
Sbjct: 1649 KVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAIS 1708

Query: 161  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
            AG    +AL        +++ G    G LG G+  ++  P  ++   L   + V V+AG+
Sbjct: 1709 AGGWNTVALD---ELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGS 1765

Query: 221  WHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
            ++  VV   G +  WG   YG LG G +
Sbjct: 1766 FYFFVVDDRGELWAWGSNSYGQLGDGTK 1793



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 26/175 (14%)

Query: 216  VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL----NDVKAIHVATG 271
            +AAG+ H+ ++    R+ +WG+ R G LG G     + P +        + V +I   +G
Sbjct: 1433 MAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGSG 1492

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG---NRHANVLTPQLVTSLKQVNERVV 328
               +  + + G ++++G   + +LG     DG G   NR      P LV      + +V 
Sbjct: 1493 ASRSQAIDDQGRLWAWGYNFAGALG-----DGTGIDRNR------PVLVDLASLGSSKVT 1541

Query: 329  QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
             ++         H   L +  +L+A+G    GQLG      +T    P  + +DL
Sbjct: 1542 AVAAG-----RYHNLVLDDQSRLWAWGHNGDGQLGD---GTRTNVAYPLPIQVDL 1588


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 145/358 (40%), Gaps = 50/358 (13%)

Query: 14  ILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK 73
           I+    ++  NG+      E +  P    +L G  +   A GA  T   + AG +Y +G 
Sbjct: 145 IVEKREVSNDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGA 204

Query: 74  DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 133
              G+   G    +    P  V +L    VVQAA G   TA ++  GRVYT+  G    L
Sbjct: 205 ---GQGRLGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVL 261

Query: 134 GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMA--VYSVGCGLGGKLGH 191
           GH  E     P  +         +Q+      ++ +A   +G +  VY+ G    G+LG 
Sbjct: 262 GHGDESACSTPREVASL-----ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGF 316

Query: 192 GSRTDEKHPRLIEQFQLLN------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
           G RT    P L+     ++      LQ  +       A  +    R+ TWG G  G LGH
Sbjct: 317 GDRTPRMSPALLADLSSISRIACTYLQSNLPVKRRHRARQLMM--RMWTWGDGASGQLGH 374

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G EE E VP+ V AL  V  I VA G   T  ++  G+V+++G G    LGH A      
Sbjct: 375 GTEEEELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAI---- 430

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                   P L+ SLK                         +SG LYA+G   +G LG
Sbjct: 431 ---LRYCKPLLIESLK-------------------------DSGHLYAWGNSRRGALG 460


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 16/188 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWG 236
           VYS GC   G LGHG+   +  P+ +++  + ++  +  +A G +H   VGQDG + TWG
Sbjct: 19  VYSWGCA-NGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQDGTLWTWG 77

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             +YG LGHG+ +   +P+ V+AL     I  A G   + V++E   VY+FG      LG
Sbjct: 78  RNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLG 137

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                    ++      P +V+ L++    V  I+   S     H+ AL +S +LY++G 
Sbjct: 138 LE-------SKVKYSAAPDIVSRLRRSG--VCHITCGYS-----HSMALLKSEQLYSWGR 183

Query: 357 GDKGQLGI 364
            D GQLG+
Sbjct: 184 NDCGQLGL 191



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 16/281 (5%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           N K  LL + ++   +Y  S+  I  I  A G   T+ +   G ++ +G++ +G+  +G 
Sbjct: 33  NSKSQLLPKALDRPLIY--SMPSITTI--ACGEFHTLAVGQDGTLWTWGRNQYGQLGHGD 88

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
             T  +  P+ VE+L+    ++AA G   + VL+   +VY F      +LG  ++     
Sbjct: 89  CKTHKL--PRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSA 146

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
              ++  L    V  I  GY + +AL        +YS G    G+LG G       P  +
Sbjct: 147 APDIVSRLRRSGVCHITCGYSHSMALL---KSEQLYSWGRNDCGQLGLGHYRSSPVPEHL 203

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDG-------RVCTWGWGRYGCLGHGNEECESVPKV 256
             F+   +Q +        A V    G       +V TWG G  G LGH       VPKV
Sbjct: 204 TMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKV 263

Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
           VQ L       VA G +++  + E   +Y++GC     LGH
Sbjct: 264 VQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLGH 304



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 14/219 (6%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG-TKLVTSPQLVE 96
           P    +L+    I+AAAG   ++++++A +VYAFG + FG+   G++   K   +P +V 
Sbjct: 95  PRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ--LGLESKVKYSAAPDIVS 152

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIP 155
            L+   V     G   +  L +  ++Y++   +  +LG  H   + V  H  L   +   
Sbjct: 153 RLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEH--LTMFKKSQ 210

Query: 156 VVQIAAGYCYLLALACQPSG------MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
           V QI+ GY + +A   + +G        VY+ G G  G+LGH        P++++   LL
Sbjct: 211 VQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQT--LL 268

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 248
                 VAAG + +A + +  ++ TWG  R G LGHG++
Sbjct: 269 ARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLGHGDD 307



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 39/275 (14%)

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLENIPVVQI 159
           V AA G   T  L+ EGRVY++   N A LGH    + + P     PL+ ++ +I    I
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSI--TTI 57

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           A G  + LA+        +++ G    G+LGHG     K PR +E  +      +  AAG
Sbjct: 58  ACGEFHTLAVG---QDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALE--KKICIKAAAG 112

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
             H+ V+ +  +V  +G   +G LG     +  + P +V  L      H+  G   +  +
Sbjct: 113 GQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMAL 172

Query: 279 SEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
            +   +YS+G   CG+   LGH          + +   P+ +T  K+   + +     ++
Sbjct: 173 LKSEQLYSWGRNDCGQ-LGLGH----------YRSSPVPEHLTMFKKSQVQQISCGYDHN 221

Query: 336 IYWNAHTFALTESG-------KLYAFGAGDKGQLG 363
           I      F    +G       K+Y +G G++GQLG
Sbjct: 222 I-----AFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 45/331 (13%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           + AA G   T+ +++ G+VY++G    + G      Q         L+ S+ +I  +  A
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTI--A 58

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVVQIAAG 162
            G F T  + ++G ++T+      +LGH     H  P  VE       LE    ++ AAG
Sbjct: 59  CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVE------ALEKKICIKAAAG 112

Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAW 221
             + L L        VY+ G  + G+LG  S+      P ++ + +   +    +  G  
Sbjct: 113 GQHSLVLT---EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGV--CHITCGYS 167

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSE 280
           H+  + +  ++ +WG    G LG G+     VP+ +      +   ++ G D+    VSE
Sbjct: 168 HSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227

Query: 281 DG--------DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
                      VY++G GE   LGH+ +         +   P++V +L     R V    
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELY--------SRCVPKVVQTLLARGIRAVAAGG 279

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +S        A+ E+ +LY +G   +GQLG
Sbjct: 280 FSSA-------AIDEAKQLYTWGCSREGQLG 303



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 23/157 (14%)

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-----VVQALNDVKAIHV 268
           V  A G  H   + ++GRV +WG    G LGHGN + + +PK     ++ ++  +  I  
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMPSITTI-- 57

Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
           A G++ T  V +DG ++++G  +   LGH     G    H     P+ V +L    E+ +
Sbjct: 58  ACGEFHTLAVGQDGTLWTWGRNQYGQLGH-----GDCKTHK---LPRRVEAL----EKKI 105

Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
            I          H+  LTE+ K+YAFG+   GQLG+E
Sbjct: 106 CIKAAAG---GQHSLVLTEANKVYAFGSNVFGQLGLE 139


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 148/329 (44%), Gaps = 41/329 (12%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+  + L G+  +  AAG   ++ +   G V+A+G +++G+   G    +LV     V+
Sbjct: 438 SPVQVQGLSGV--VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVP----VQ 491

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENI 154
            L  +  V A  G+  +  +  +G V+T  WG++   +LG  T  N + P  + G     
Sbjct: 492 VLSGVVAVAA--GSNHSLAVRSDGTVWT--WGSNLYGQLGDGTTSNRLVPVQVQGLSG-- 545

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
            V  +AAG  + LA+    S   V++ G    G+LG G+ ++   P  +          V
Sbjct: 546 -VAAVAAGSFHSLAVHSDGS---VWAWGSNSSGELGDGTTSNRLVPGRVPGLS----GGV 597

Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
            VAAG +H+ VV  DG V TWG   +G LG G     SVP  VQ L+ V A+    G+  
Sbjct: 598 AVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLSGVVAVDA--GNSH 655

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           +  V  DG V+++G      LG     DG   R +    P  V  L  V      +++  
Sbjct: 656 SLAVRSDGTVWTWGYNSYGQLG-----DGTTTRRS---VPVQVPGLSGV------VAMAT 701

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                 H   +   G ++A+G    GQLG
Sbjct: 702 GAL---HPLVVRSDGTVWAWGYNSFGQLG 727



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 167/373 (44%), Gaps = 49/373 (13%)

Query: 15  LRPDIINERNGKRNLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQV 68
           LRPD      G  N LG+  +GT      P+    L G+  +  AAG+  ++ +   G V
Sbjct: 61  LRPDGTVWATGS-NDLGQLGDGTTTNHSAPVQVPGLSGV--VAVAAGSSHSLAVRHDGTV 117

Query: 69  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +A+G +S G+   G    +L  +P  V+ L    VV  A G+ ++  +  +G V+  +WG
Sbjct: 118 WAWGSNSDGQLGDGTTTMRL--TPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVW--AWG 171

Query: 129 ND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLG 186
           ++   +LG  T  N + P  + G      VV +AAG  + LA+    S   V++ G    
Sbjct: 172 SNFSGQLGDGTTSNRLVPVQVPGLSG---VVSVAAGSSHSLAVLSDGS---VWAWGANSS 225

Query: 187 GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           G+LG G++ +   P  +     +       A    H+  V  DG V TWG   +G LG G
Sbjct: 226 GQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANSFGQLGDG 281

Query: 247 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
            +    VP  VQ L+ V A  V  G Y +  +  DG V+++G   S  LG     D   +
Sbjct: 282 TKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWGHNSSGQLGD----DSSTS 335

Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL 366
           R   V          QV      +++T     ++H+ A+   G ++A+G+   G+ G   
Sbjct: 336 RSVPV----------QVRGLSGGMAVTAG---SSHSLAVGSDGTVWAWGSNFSGERGEGT 382

Query: 367 VNNQTERGNPERV 379
            NN   R +P +V
Sbjct: 383 TNN---RASPVQV 392



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 16/251 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  AAG+  ++ +   G V+ +G + +G+   G    +LV  P  V+ L  +  V A  
Sbjct: 496 VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLV--PVQVQGLSGVAAVAA-- 551

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+F +  +  +G V+ +   +   LG  T  N + P  + G       V +AAG  + L 
Sbjct: 552 GSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG---VAVAAGGFHSLV 608

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    +   V++ G    G+LG G+ T    P  ++    +    V V AG  H+  V  
Sbjct: 609 VRSDGT---VWTWGSNSFGELGDGTTTSRSVPVQVQGLSGV----VAVDAGNSHSLAVRS 661

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V TWG+  YG LG G     SVP  V  L+ V A+  ATG     VV  DG V+++G
Sbjct: 662 DGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSGVVAM--ATGALHPLVVRSDGTVWAWG 719

Query: 289 CGESASLGHNA 299
                 LG+ +
Sbjct: 720 YNSFGQLGNGS 730



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 35/312 (11%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
           ++ +   G V+ +G +SFG+   G +  +LV  P  V+ L    VV + +G++ +  L  
Sbjct: 258 SLAVRSDGTVWTWGANSFGQLGDGTKSDRLV--PVRVQGLSG--VVASDVGSYHSLALRS 313

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
           +G V+ +   +  +LG  +  +   P  + G    + V    AG  + LA+    +   V
Sbjct: 314 DGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVT---AGSSHSLAVGSDGT---V 367

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           ++ G    G+ G G+  +   P  ++         V VAAG  H+     DG V  WG  
Sbjct: 368 WAWGSNFSGERGEGTTNNRASPVQVQGLG----GGVAVAAGFNHSLAARSDGSVWAWGSN 423

Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
             G LG G     + P  VQ L+ V  + VA G   +  +  DG V+++G      LG  
Sbjct: 424 DSGQLGDGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEG 481

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
                      N L P       QV   VV ++  ++     H+ A+   G ++ +G+  
Sbjct: 482 TT--------TNRLVP------VQVLSGVVAVAAGSN-----HSLAVRSDGTVWTWGSNL 522

Query: 359 KGQLGIELVNNQ 370
            GQLG    +N+
Sbjct: 523 YGQLGDGTTSNR 534



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 142/335 (42%), Gaps = 41/335 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L G+  + +  G+  ++ +   G V+A+G +S G+   G   +   + P  V  
Sbjct: 289 PVRVQGLSGV--VASDVGSYHSLALRSDGSVWAWGHNSSGQ--LGDDSSTSRSVPVQVRG 344

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIP 155
           L     V A  G+  +  +  +G V+  +WG++     G  T  N   P  + G      
Sbjct: 345 LSGGMAVTA--GSSHSLAVGSDGTVW--AWGSNFSGERGEGTTNNRASPVQVQGLGGG-- 398

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
            V +AAG+ + LA     S   V++ G    G+LG G+  +   P  ++    +    V 
Sbjct: 399 -VAVAAGFNHSLAARSDGS---VWAWGSNDSGQLGDGTTRNSTSPVQVQGLSGV----VA 450

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           VAAG  H+  +  DG V  WG   YG LG G      VP  VQ L+ V  + VA G   +
Sbjct: 451 VAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVP--VQVLSGV--VAVAAGSNHS 506

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             V  DG V+++G      LG    +        N L P  V  L  V   V   S    
Sbjct: 507 LAVRSDGTVWTWGSNLYGQLGDGTTS--------NRLVPVQVQGLSGV-AAVAAGSF--- 554

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                H+ A+   G ++A+G+   G+LG    +N+
Sbjct: 555 -----HSLAVHSDGSVWAWGSNSSGELGDGTTSNR 584



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 28/229 (12%)

Query: 28  NLLGREVNGT------PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEY 81
           NL G+  +GT      P+  + L G+  +  AAG+  ++ +   G V+A+G +S GE   
Sbjct: 521 NLYGQLGDGTTSNRLVPVQVQGLSGVAAV--AAGSFHSLAVHSDGSVWAWGSNSSGELGD 578

Query: 82  GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEP 139
           G    +LV  P  V  L     V A  G F + V+  +G V+T  WG+++   LG  T  
Sbjct: 579 GTTSNRLV--PGRVPGLSGGVAVAA--GGFHSLVVRSDGTVWT--WGSNSFGELGDGTTT 632

Query: 140 NDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH 199
           +   P  + G      VV + AG  + LA+    +   V++ G    G+LG G+ T    
Sbjct: 633 SRSVPVQVQGLSG---VVAVDAGNSHSLAVRSDGT---VWTWGYNSYGQLGDGTTTRRSV 686

Query: 200 PRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           P      Q+  L  VV +A GA H  VV  DG V  WG+  +G LG+G+
Sbjct: 687 P-----VQVPGLSGVVAMATGALHPLVVRSDGTVWAWGYNSFGQLGNGS 730



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 28/191 (14%)

Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGR 239
           VGCGL         TDE   +      L +      +AAG+ ++  +  DG V   G   
Sbjct: 23  VGCGL--------PTDESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSND 74

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 299
            G LG G     S P  V  L+ V  + VA G   +  V  DG V+++G      LG   
Sbjct: 75  LGQLGDGTTTNHSAPVQVPGLSGV--VAVAAGSSHSLAVRHDGTVWAWGSNSDGQLG--- 129

Query: 300 IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
             DG        LTP  V  L      VV ++  +S     ++ A+   G ++A+G+   
Sbjct: 130 --DGTTTMR---LTPVRVQGLSG----VVSVAAGSS-----YSLAVRSDGTVWAWGSNFS 175

Query: 360 GQLGIELVNNQ 370
           GQLG    +N+
Sbjct: 176 GQLGDGTTSNR 186


>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
 gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
          Length = 337

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 131 ARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKL 189
           A+LG  T+ +   P P+    +N+  V+ I+AG     + A +  G A ++ G  L G+L
Sbjct: 9   AQLGDGTKTDRYSPIPV----KNLDSVIGISAGGA--ASFAVRSDGTA-WAWGSNLFGQL 61

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           G G+  D   P  ++    +    V + AG+ H+  V  DG V  WGW  YG LG G  +
Sbjct: 62  GDGTTYDRLTPVQVQGLHSV----VALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTD 117

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
             S P  VQAL+ V  + VA G   +  V  DG V+++G   S  LG     DG    + 
Sbjct: 118 SRSTPVQVQALDSV--VAVAAGSGHSLAVKADGSVWAWGANWSGQLG-----DG---TYT 167

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
               P  VT L      VV +S  N+      + AL   G ++A+GA D GQLG E
Sbjct: 168 ESTVPVQVTGLG----SVVSVSAGNTF-----SSALKSDGTVWAWGANDSGQLGSE 214



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 36/344 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+  ++L    +I  +AG   +  +   G  +A+G + FG+   G    +L  +P  V+
Sbjct: 21  SPIPVKNLD--SVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRL--TPVQVQ 76

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L ++  ++A  G+  +  +  +G V+ + W    +LG  T  +   P  +   L++  V
Sbjct: 77  GLHSVVALEA--GSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQ-ALDS--V 131

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           V +AAG  + LA+    S   V++ G    G+LG G+ T+   P      Q+  L  VV 
Sbjct: 132 VAVAAGSGHSLAVKADGS---VWAWGANWSGQLGDGTYTESTVP-----VQVTGLGSVVS 183

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V+AG   ++ +  DG V  WG    G LG       S P  VQ      A  +++G   +
Sbjct: 184 VSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNS-PSPVQVTGMASAAAISSGSDYS 242

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G   S  LG+                P  VT L  V      +S+   
Sbjct: 243 LALKNDGTVWAWGYNSSGQLGNGTTTSSS--------APVQVTRLGSV------VSVAAG 288

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                H  A+   G ++ +G    GQLG        +R  P +V
Sbjct: 289 PL---HGLAVQSGGTVWDWGNNTYGQLGDGYFGGGYDRSLPFQV 329


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 60/315 (19%)

Query: 30  LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG+EV+ T P    +LQ +RI+Q   G   +M +++AGQVY +G +S G+   G +G + 
Sbjct: 83  LGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNG-EGQES 141

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDV-- 142
             SP+ V++L    VVQ A G+     L   G +Y  +WG++      +G   EP  V  
Sbjct: 142 RLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALY--AWGDNGNGQLGIGTVGEPQRVPV 199

Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
           E   LLG    +P+ QIA G  + + L+   SG+ ++  G    G+LG     D   P L
Sbjct: 200 EVTNLLG----LPLSQIACGANHSMVLS--KSGV-IFVWGSNRFGQLGLSDNKDRAFPTL 252

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW------------------------- 237
           ++  +  +++   +AAG  H+A +   G V T+GW                         
Sbjct: 253 LKTLRQQHVK--FIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALAR 310

Query: 238 ---------------GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSED 281
                          G YG LGHG++  +  P  +Q L       +A G  +T       
Sbjct: 311 KLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTV 370

Query: 282 GDVYSFGCGESASLG 296
           G V++FG G +  LG
Sbjct: 371 GKVFTFGLGGNGQLG 385



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 159/360 (44%), Gaps = 50/360 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L+GIR+ Q A GA  T++++  G+V + G +   +    V  TK    P+ V +
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTK----PEPVTA 97

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHPLLGTLENIPV 156
           L+ + +VQ   G   +  L+  G+VY +   +  +LG+   + + + P   + TL    V
Sbjct: 98  LQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPR-FVKTLAPFTV 156

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           VQIA G  + LAL    +  A+Y+ G    G+LG G+   E     +E   LL L    +
Sbjct: 157 VQIACGSNHCLALL---NNGALYAWGDNGNGQLGIGT-VGEPQRVPVEVTNLLGLPLSQI 212

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A GA H+ V+ + G +  WG  R+G LG  + +  + P +++ L       +A G   + 
Sbjct: 213 ACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSA 272

Query: 277 VVSEDGDVYSFG-----------------CGESASLGHN--AIADGQGNRHA-------- 309
            ++  G V++FG                     ++L     ++ + +  RH+        
Sbjct: 273 ALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLG 332

Query: 310 -----NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES-GKLYAFGAGDKGQLG 363
                + LTP  +  L  +   + QI+L        HT     + GK++ FG G  GQLG
Sbjct: 333 HGSKNDQLTPMKIQEL--MGTTITQIALG-----RCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 28/201 (13%)

Query: 184 GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
           GLGG   H  R     PR I Q + + ++ +  A GA H  V+   GRV + G   +  L
Sbjct: 30  GLGGIEDHIVRV----PRSIPQLEGIRVRQI--ATGAHHTLVLTSHGRVLSCGSNDHDQL 83

Query: 244 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
           G   E   + P+ V AL  ++ + V  G   +  ++E G VY +G      LG+    +G
Sbjct: 84  GQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN---GEG 138

Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           Q +R    L+P+ V +L      VVQI+  ++     H  AL  +G LYA+G    GQLG
Sbjct: 139 QESR----LSPRFVKTLAPFT--VVQIACGSN-----HCLALLNNGALYAWGDNGNGQLG 187

Query: 364 IELVNNQTERGNPERVDIDLS 384
           I  V      G P+RV ++++
Sbjct: 188 IGTV------GEPQRVPVEVT 202



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 25/287 (8%)

Query: 71  FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 130
           FG  + GE   G     +V  P+ +  L+ I V Q A G   T VL+  GRV +    + 
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80

Query: 131 ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG 190
            +LG        EP   +  L+ + +VQ+  G  + +AL        VY  G    G+LG
Sbjct: 81  DQLGQEVSTTKPEP---VTALQCLRIVQVCCGQQHSMALT---EAGQVYMWGSNSKGQLG 134

Query: 191 HGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE- 248
           +G   + +  PR ++      +  V +A G+ H   +  +G +  WG    G LG G   
Sbjct: 135 NGEGQESRLSPRFVKTLAPFTV--VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG 192

Query: 249 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
           E + VP  V  L  +    +A G   + V+S+ G ++ +G      LG   ++D +    
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLG---LSDNKDRAF 249

Query: 309 ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
                P L+ +L+Q + + +           AH+ ALT  G ++ FG
Sbjct: 250 -----PTLLKTLRQQHVKFIAAG-------GAHSAALTAHGGVFTFG 284



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 25/227 (11%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
           LE I V QIA G  + L L    S   V S G     +LG    T +  P  +   Q L 
Sbjct: 48  LEGIRVRQIATGAHHTLVLT---SHGRVLSCGSNDHDQLGQEVSTTKPEP--VTALQCLR 102

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVA 269
           +  V V  G  H+  + + G+V  WG    G LG+G  +E    P+ V+ L     + +A
Sbjct: 103 I--VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIA 160

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G      +  +G +Y++G   +  LG   + + Q         P  VT+L       + 
Sbjct: 161 CGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQR-------VPVEVTNL-------LG 206

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           + L+       H+  L++SG ++ +G+   GQLG+   ++  +R  P
Sbjct: 207 LPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGL---SDNKDRAFP 250


>gi|196007790|ref|XP_002113761.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
 gi|190584165|gb|EDV24235.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
          Length = 507

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 47/343 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P  C+++  +R I    G  +T ++S  G+VY  G+    E E+    +K +  P+L+  
Sbjct: 170 PARCKAISKLRPIMIKGGHDKTYILSQEGKVYGIGQVELKEDEHD---SKNLHVPRLING 226

Query: 98  LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
           L ++ +++  I     F   ++ +G +Y  SWG               P   + ++++  
Sbjct: 227 LSHLTIIKLDIHPDGHFALGITIKGELY--SWGE-------------TPAQQITSVKDAI 271

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
              I+ G  +  A+  Q     +Y+ G G  G LGHG+      P L+E   L +   + 
Sbjct: 272 FTNISCGRDHRAAITNQGK---LYTWGYGGLGCLGHGNSKTCLEPTLVEA--LADKVVID 326

Query: 216 VAAGAW---HAAVVGQDGRVCTWG---WGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           VA G+    H   V  D +V +WG    G+ G + +  + C ++P V+  L +     V 
Sbjct: 327 VACGSANQNHTVAVTSDDKVWSWGDPAGGKLGRIINSTKPC-TLPGVIDGLLNKSVHRVI 385

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T  ++  G +YS+G G      H  +         +V  P++V  LK  ++RV+ 
Sbjct: 386 CGSAFTLALTTSGSLYSWGHGSHYHSQHGIVG--------SVERPKIVDVLK--DKRVIA 435

Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTE 372
           I+   S++W     A T  G++YA+G  D GQLG++ + + T+
Sbjct: 436 IA-AGSLHW----LACTIYGEIYAWGNNDAGQLGVKTLKSSTD 473


>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
 gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
          Length = 338

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 33/244 (13%)

Query: 125 FSWG--NDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCYLLALACQPSGMAVYSV 181
           ++WG  ++A+LG  T+ +   P P+    +N+  V+ I+AG     + A +  G A ++ 
Sbjct: 2   WAWGANSNAQLGDGTKTDRYSPIPV----KNLDSVIGISAGGA--ASFAVRSDGTA-WAW 54

Query: 182 GCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
           G  L G+LG G+  D   P  ++    +    V + AG+ H+  V  DG V  WGW  YG
Sbjct: 55  GSNLFGQLGDGTTYDRLTPVQVQGLHSV----VALEAGSSHSLAVKADGSVWAWGWNTYG 110

Query: 242 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
            LG G  +  S P  V+ L+ V  + VA G   +  V  DG V+++G   S  LG     
Sbjct: 111 QLGDGTTDSRSTPVQVEGLDSV--VAVAAGSGHSLAVKADGSVWAWGANWSGQLG----- 163

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
           DG    +     P  VT L      VV +S  N+      + AL   G ++A+GA D GQ
Sbjct: 164 DG---TYTESTVPVQVTGLG----SVVSVSAGNTF-----SSALKSDGTVWAWGANDSGQ 211

Query: 362 LGIE 365
           LG E
Sbjct: 212 LGSE 215



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 36/298 (12%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           ++A+G +S  +   G +  +   SP  V++L ++  + A  G   +  +  +G  +  +W
Sbjct: 1   MWAWGANSNAQLGDGTKTDRY--SPIPVKNLDSVIGISA--GGAASFAVRSDGTAW--AW 54

Query: 128 GND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL 185
           G++   +LG  T  + + P  + G      VV + AG  + LA+    S   V++ G   
Sbjct: 55  GSNLFGQLGDGTTYDRLTPVQVQGLHS---VVALEAGSSHSLAVKADGS---VWAWGWNT 108

Query: 186 GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
            G+LG G+      P  +E    +    V VAAG+ H+  V  DG V  WG    G LG 
Sbjct: 109 YGQLGDGTTDSRSTPVQVEGLDSV----VAVAAGSGHSLAVKADGSVWAWGANWSGQLGD 164

Query: 246 GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           G     +VP  V  L  V  + V+ G+  +  +  DG V+++G  +S  LG    A    
Sbjct: 165 GTYTESTVPVQVTGLGSV--VSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAA---- 218

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              +N  +P  VT +                    ++ AL   G ++A+G    GQLG
Sbjct: 219 ---SNSPSPVQVTGMASAAAISSGSD---------YSLALKNDGTVWAWGYNSSGQLG 264



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 36/344 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P+  ++L    +I  +AG   +  +   G  +A+G + FG+   G    +L  +P  V+
Sbjct: 22  SPIPVKNLD--SVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRL--TPVQVQ 77

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L ++  ++A  G+  +  +  +G V+ + W    +LG  T  +   P  + G L++  V
Sbjct: 78  GLHSVVALEA--GSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVEG-LDS--V 132

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV- 215
           V +AAG  + LA+    S   V++ G    G+LG G+ T+   P      Q+  L  VV 
Sbjct: 133 VAVAAGSGHSLAVKADGS---VWAWGANWSGQLGDGTYTESTVP-----VQVTGLGSVVS 184

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           V+AG   ++ +  DG V  WG    G LG       S P  VQ      A  +++G   +
Sbjct: 185 VSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNS-PSPVQVTGMASAAAISSGSDYS 243

Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
             +  DG V+++G   S  LG+                P  VT L  V      +S+   
Sbjct: 244 LALKNDGTVWAWGYNSSGQLGNGTTTSSS--------APVQVTRLGSV------VSVAAG 289

Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
                H  A+   G ++ +G    GQLG        +R  P +V
Sbjct: 290 PL---HGLAVQSGGTVWDWGNNTYGQLGDGYFGGGYDRSLPFQV 330


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 11/277 (3%)

Query: 30  LGREVNGTPL-YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LGR+ N + +    SL+   I+  + G   ++ + D G +Y++G  S G+   G   +K 
Sbjct: 66  LGRKGNNSRIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKN 125

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHP 146
            T P+ +  L N  ++Q + GNF +  L+ +GRV  FSWG +   +LG  ++  +     
Sbjct: 126 FT-PKRITGLLNRKIIQISCGNFHSVALAEDGRV--FSWGQNKCGQLGLGSQIINQATPQ 182

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           L+ +L+ IP+VQ+ AG     AL+   SG  V++ G    G+LG  +   +   +     
Sbjct: 183 LVKSLKGIPLVQVTAGGSQTFALSM--SG-TVFAWGRNNAGQLGFKNDAKKGTFKPYAVD 239

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            L +L    ++ G  H AV+ +DG V T+G   YG LG  +    SVP+ ++  +  +  
Sbjct: 240 SLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSR-QVS 298

Query: 267 HVATGDYTTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
            VA G Y T + V     + SFG G     G++  +D
Sbjct: 299 QVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSD 335



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 26/315 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +Y +G + FG+     +  ++V   +     K   V + +IG   +  L ++G + +   
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
               +LG     + +E    + +LE   +V ++ G  + +A+ C      +YS G G  G
Sbjct: 61  NPYGQLGRKGNNSRIEQ---ISSLEAQTIVDVSCGTNHSVAM-CDEGN--IYSWGDGSEG 114

Query: 188 KLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG G  + +   P+ I    LLN + + ++ G +H+  + +DGRV +WG  + G LG G
Sbjct: 115 QLGTGKFSSKNFTPKRITG--LLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG 172

Query: 247 NEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
           ++   ++ P++V++L  +  + V  G   TF +S  G V+++G   +  LG       + 
Sbjct: 173 SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGF------KN 226

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +       P  V SL+ +   V  IS         HT  L + G +Y FG    GQLG +
Sbjct: 227 DAKKGTFKPYAVDSLRDLG--VAYISCGEE-----HTAVLNKDGIVYTFGDDTYGQLG-Q 278

Query: 366 LVNNQTERGNPERVD 380
              NQT    P++++
Sbjct: 279 QSGNQTSV--PQKIE 291



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 30  LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           LG ++    TP   +SL+GI ++Q  AG  +T  +S +G V+A+G+++ G+  +     K
Sbjct: 171 LGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKK 230

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
               P  V+SL+++ V   + G   TAVL+++G VYTF      +LG  +      P  +
Sbjct: 231 GTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKI 290

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQF 206
                 +  V     +  L    C      + S G G   + G+   +D+ +  +L   F
Sbjct: 291 EEYSRQVSQVACGRYHTLLYVFTCN----RIVSFGKGSQRQQGNDESSDQAEASQLPSAF 346

Query: 207 QLLNLQP 213
            + +L P
Sbjct: 347 DISSLVP 353


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 14/294 (4%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           +  E+   P  C    G R+     G   T+ + D G VY  G +  G+  +     K  
Sbjct: 17  IDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKK-- 74

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
             P+ V +L    +V  + G   T  L+ +G+V+++  G++ +LG +     V     + 
Sbjct: 75  --PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIK 132

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---HGSRTDEKHPRLIEQF 206
            L ++ + Q+A GY +  AL+    G  V+S G    G+LG   HGS      P++I+  
Sbjct: 133 CLSDVQIAQVACGYWHSHALS---KGGQVFSWGQNQFGQLGLGMHGSSIST--PQIIQSL 187

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
           Q   +    ++AG  H+  +   G V  WG  ++G LG  + +    P ++++L   + I
Sbjct: 188 Q--GIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVI 245

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL 320
            V+ G+  T  +++   V++FG G    LGHN        R    L   +VT +
Sbjct: 246 FVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQI 299



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 147/314 (46%), Gaps = 28/314 (8%)

Query: 68  VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
           +  +G  S+G+   G    ++V  P+  E      V     G   T  L  +G VYT   
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
            +  +LGH  E +  +P  ++     I +V ++ G  + LAL  +     V+S G G  G
Sbjct: 61  NDLGQLGH--EKSRKKPEHVVALDAQI-IVAVSCGESHTLALNDKGQ---VFSWGLGSNG 114

Query: 188 KLGHGSRTD-EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
           +LG  +  +  + PR I+   L ++Q   VA G WH+  + + G+V +WG  ++G LG G
Sbjct: 115 QLGLNNFEECVRVPRNIKC--LSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLG 172

Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                 S P+++Q+L  +    ++ G   +F ++  G V+ +G  +   LG N   D   
Sbjct: 173 MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDR-- 230

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
                   P L+ SL+  ++RV+ +S         HT ALT+   ++ FGAG  GQLG  
Sbjct: 231 ------WFPALLKSLR--SQRVIFVSCGED-----HTAALTKLRGVFTFGAGGYGQLGHN 277

Query: 366 LVNNQTERGNPERV 379
             N++    NP +V
Sbjct: 278 CTNHEI---NPRKV 288


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 50/317 (15%)

Query: 68   VYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVL---SRE--- 119
            VY++GK  F       QG  + TS  P+++       + Q A G++ +AVL   S++   
Sbjct: 1015 VYSWGKVPFNCLG---QGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPN 1071

Query: 120  -GRVYTFSWGNDARLGHHTEPN-DV------------------EPHPL-LGTLENIPVVQ 158
             G V+TF  GN  RLG+H + N DV                   P P+ L       +V 
Sbjct: 1072 AGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVS 1131

Query: 159  IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
            IA G  + L          VYS G G  G LG GS  +  +P  +  F   N+      A
Sbjct: 1132 IACGANHTLVTTVDG---CVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCA 1187

Query: 219  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
            G+ H+  + ++G V +WG+G  G LG G+      P +++  +  +   ++ GD  +  +
Sbjct: 1188 GSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACL 1247

Query: 279  SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
               G VY++GC     LG   I        ++VL P +V SLK  +  ++QI+       
Sbjct: 1248 DRFGTVYTWGCCRGGKLGLGKIV-------SDVLEPAVVESLKGTH--IIQIAC-----G 1293

Query: 339  NAHTFALTESGKLYAFG 355
              +T AL+ SGK+Y +G
Sbjct: 1294 TGNTLALSASGKIYQWG 1310



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 151/351 (43%), Gaps = 56/351 (15%)

Query: 47   IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
            I I +  AG+  +M +   G V+++G    G    G+  T+   +P L+       V Q 
Sbjct: 1180 IFISKCCAGSRHSMALDKEGNVWSWGYG--GNGRLGLGSTRNYYTPNLIRIFDTYEVFQI 1237

Query: 107  AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
            + G+  +A L R G VYT+      +LG     +DV    ++ +L+   ++QIA G    
Sbjct: 1238 SCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNT 1297

Query: 167  LALACQPSGMAVYSVGCGLG-GKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAA 224
            LAL+   SG  +Y  GC LG  K   G  ++  + P+ +      N   V +AAG +  A
Sbjct: 1298 LALSA--SG-KIYQWGCTLGFNKQSEGLISNIDYVPQPVPDTGFKN---VFIAAGPYSCA 1351

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL---------------------NDV 263
             +   G + TWG G    LGHG+ +    PK V  L                     ++V
Sbjct: 1352 AINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNV 1411

Query: 264  KA-----------IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            KA             +A GD    +++ +G VY++G       G+N+  D   +    +L
Sbjct: 1412 KAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGT--GYNSTKDQIESYSEPML 1469

Query: 313  TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                       + ++ +I+  ++     H+ A+T +G L+ +G  D GQLG
Sbjct: 1470 -------FNHFSSKISKIACGSN-----HSLAITVNGLLFTWGCNDNGQLG 1508



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 151/381 (39%), Gaps = 73/381 (19%)

Query: 30   LGREVNGT--PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKD-SFGEAEYG-VQG 85
            LG+ V+    P    SL+G  IIQ A G G T+ +S +G++Y +G    F +   G +  
Sbjct: 1266 LGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISN 1325

Query: 86   TKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 145
               V  P      KN+F+   A G +  A ++  G + T+  G   RLGH    + V P 
Sbjct: 1326 IDYVPQPVPDTGFKNVFI---AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPK 1382

Query: 146  ------------PLLGTLENIP-------------------VVQIAAGYCYLLALACQPS 174
                         LL   +  P                   + QIA G  + + L C  +
Sbjct: 1383 FVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGT 1442

Query: 175  GMAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
               VY+ G   G   G+ S  D+      P L   F   + +   +A G+ H+  +  +G
Sbjct: 1443 ---VYTWGVNNGT--GYNSTKDQIESYSEPMLFNHF---SSKISKIACGSNHSLAITVNG 1494

Query: 231  RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH--------VATGDYTTFVVSEDG 282
             + TWG    G LG G+     +P  V  + +   +         + + ++  F+  + G
Sbjct: 1495 LLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYG 1554

Query: 283  DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
             ++ FG      LG            + V+TP+ +T++  V +  +            H+
Sbjct: 1555 TLWVFGSSSCGKLGLGEALT------STVMTPREITTVTGVYKLAL---------GTMHS 1599

Query: 343  FALTESGKLYAFGAGDKGQLG 363
              LT  G LY+ GAG  G+LG
Sbjct: 1600 VVLTHEGSLYSAGAGTGGRLG 1620



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 38/288 (13%)

Query: 44   LQGIRIIQAAAGAGRT-MLIS------DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ--- 93
              G +I Q A G   + +L+S      +AG V+ FG  + G   Y +     V S Q   
Sbjct: 1044 FSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGT 1103

Query: 94   -----------------LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 136
                             L   L+N  +V  A G   T V + +G VY++  G    LG  
Sbjct: 1104 EDKDEPSWCTHTPQPVGLSIGLRNA-IVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTG 1162

Query: 137  TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
            +  N   P  ++   +NI + +  AG  + +AL  + +   V+S G G  G+LG GS  +
Sbjct: 1163 SVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGN---VWSWGYGGNGRLGLGSTRN 1219

Query: 197  EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PK 255
               P LI  F     +   ++ G  H+A + + G V TWG  R G LG G    + + P 
Sbjct: 1220 YYTPNLIRIFD--TYEVFQISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPA 1277

Query: 256  VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
            VV++L     I +A G   T  +S  G +Y +GC    +LG N  ++G
Sbjct: 1278 VVESLKGTHIIQIACGTGNTLALSASGKIYQWGC----TLGFNKQSEG 1321



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 29/168 (17%)

Query: 232  VCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSED-------GD 283
            V +WG   + CLG G +   S  PK++   +  K   VA GDY + V+          G 
Sbjct: 1015 VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGT 1074

Query: 284  VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV--------VQISLTNS 335
            V++FG G S  LG++       + +++VL+ Q+ T  K              + I L N+
Sbjct: 1075 VFTFGLGNSGRLGYHI------DTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNA 1128

Query: 336  IYWNA----HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            I   A    HT   T  G +Y++G G  G LG   V N   R NP +V
Sbjct: 1129 IVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVAN---RYNPVKV 1173



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 131/319 (41%), Gaps = 71/319 (22%)

Query: 103  VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH--PLLGTLENIPVVQIA 160
            + Q A+G+    +L+  G VYT  WG +   G+++  + +E +  P+L    +  + +IA
Sbjct: 1424 IQQIAVGDGHGVLLTCNGTVYT--WGVNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIA 1481

Query: 161  AGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---SRTDEKHPRLIEQFQLLNLQPVVVA 217
             G  + LA+    +G+ +++ GC   G+LG G   SR    H   IE    +N+   V  
Sbjct: 1482 CGSNHSLAITV--NGL-LFTWGCNDNGQLGQGDLRSRVIPDHVPYIE--NCINVFAGVDN 1536

Query: 218  AGAW----HAAVVGQD-GRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVAT 270
            +G      H   +  D G +  +G    G LG G     +V  P+ +  +  V  +  A 
Sbjct: 1537 SGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGVYKL--AL 1594

Query: 271  GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN-----E 325
            G   + V++ +G +YS G G    LG    ++        V TP + T +K V+      
Sbjct: 1595 GTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSN------YFVFTP-VKTEVKFVDVCAGSS 1647

Query: 326  RVVQISLTNSIY-WNA-------------------------------------HTFALTE 347
              + IS+ N +Y W                                       H+  LT 
Sbjct: 1648 HSLAISVDNELYGWGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTN 1707

Query: 348  SGKLYAFGAGDKGQLGIEL 366
            SG + AFG    GQLG++L
Sbjct: 1708 SGYVAAFGNNTYGQLGVQL 1726



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 22/198 (11%)

Query: 177  AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            ++YS G G GG+LG G  ++      +       ++ V V AG+ H+  +  D  +  WG
Sbjct: 1607 SLYSAGAGTGGRLGTGDTSN----YFVFTPVKTEVKFVDVCAGSSHSLAISVDNELYGWG 1662

Query: 237  WGRYGCLGHGNEECESVPKVVQAL----NDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             G+Y C    +E+    P +++ +     + K I        + V++  G V +FG    
Sbjct: 1663 EGKYIC---SDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTY 1719

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
              LG         N          +     VN       +  S Y+++ +   T  G  Y
Sbjct: 1720 GQLGVQLSIKSSAN--------NFIKMPSTVNLDANVTCIATSRYFSSCS---TLKGDAY 1768

Query: 353  AFGAGDKGQLGIELVNNQ 370
            ++G     +LG+   NN+
Sbjct: 1769 SWGLSSDDRLGVGFTNNK 1786



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 48   RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ------GTKLVTSPQLVESLKNI 101
            ++I A A    +++++++G V AFG +++G  + GVQ          +  P  V    N+
Sbjct: 1691 KVISAVAAGNHSLVLTNSGYVAAFGNNTYG--QLGVQLSIKSSANNFIKMPSTVNLDANV 1748

Query: 102  FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
              +  A   +F++  + +G  Y++   +D RLG
Sbjct: 1749 TCI--ATSRYFSSCSTLKGDAYSWGLSSDDRLG 1779


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 43/288 (14%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
           SP++V  L+++ VV+ A G  F+  ++ +G VY++ +    +LG     N   P  L+  
Sbjct: 177 SPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQ-LVPH 235

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF---- 206
           L+ + +V    G  + + L+   +   VY+ G G+ G+LGHG  +DE+ PR +E      
Sbjct: 236 LQGVHIVSATCGQQHSVLLS---AAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAE 292

Query: 207 ---QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN--------EECE---- 251
              +    + V +A G+ H   +G  G V TWG   YG  G  N        +  E    
Sbjct: 293 EGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAA 352

Query: 252 ---SVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
              + P+ +    D K I HV+ G       + DG VYS+G G    LGH       GN 
Sbjct: 353 MICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGH-------GN- 404

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE-SGKLYAF 354
           H   L P+L+  +    ER+VQ +         H+ A+   S  L+AF
Sbjct: 405 HRFQLVPKLIRRIG--GERIVQTAAGAK-----HSLAVNAGSSTLFAF 445



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P     LQ +++++ AAG   ++ ++  G+VY++G +   +   G +  + V  PQLV 
Sbjct: 177 SPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSV--PQLVP 234

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGTLEN 153
            L+ + +V A  G   + +LS  G VYTF  G   +LGH    ++  P     L+   E 
Sbjct: 235 HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEG 294

Query: 154 IP-----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG---------HGSRTDEKH 199
           +      +VQIA G  + LAL    SG  V++ G    G+ G          G R ++  
Sbjct: 295 VESAGERIVQIACGSHHTLALGV--SGT-VWTWGSAEYGQQGGTNAYEDWATGQRAEKSA 351

Query: 200 PRLIEQFQLLN-----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
             +    + L+          V+ G  H     +DG V +WGWG YG LGHGN   + VP
Sbjct: 352 AMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVP 411

Query: 255 KVVQALNDVKAIHVATGDYTTFVVS 279
           K+++ +   + +  A G   +  V+
Sbjct: 412 KLIRRIGGERIVQTAAGAKHSLAVN 436



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 139/339 (41%), Gaps = 38/339 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+     +G RI   A G   +M + + G VY +G+   G+   G +       P  VE 
Sbjct: 20  PILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPVRVEG 79

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L++  VV    G      ++  G++Y   WG    L  H E +            N    
Sbjct: 80  LRHERVVAGVCGYNHCLAVTVGGKLY--QWG---MLHKHVEGS-----------ANKEYF 123

Query: 158 QIAAGYCYL----LALACQPSGMAVYSVGCGLGGKLGHGSRTD---------EKHPRLIE 204
            +A G   L    +      S    Y+ G   G +L   SR           +  P ++ 
Sbjct: 124 GMAIGLSGLNSDRMKRMVGRSHSTYYAAGA-TGEELEELSRVQNFGSFTPYTQPSPEVVT 182

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
             Q  +++ V VAAG   +  V   G V +WG+     LG G+   +SVP++V  L  V 
Sbjct: 183 GLQ--HVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVH 240

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
            +    G   + ++S  G VY+FG G    LGH   +D +  R    L P     ++   
Sbjct: 241 IVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPA-EEGVESAG 299

Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           ER+VQI+  +      HT AL  SG ++ +G+ + GQ G
Sbjct: 300 ERIVQIACGSH-----HTLALGVSGTVWTWGSAEYGQQG 333



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 95/255 (37%), Gaps = 70/255 (27%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY  G    G+LG+G R      + +    L + + V    G  H   V   G++  WG 
Sbjct: 50  VYVWGRAKEGQLGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGM 109

Query: 238 --------------------------------GR----YGCLGHGNEECESV-------- 253
                                           GR    Y   G   EE E +        
Sbjct: 110 LHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGS 169

Query: 254 --------PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                   P+VV  L  VK + VA G   +  V+  G+VYS+G  E   L       G G
Sbjct: 170 FTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQL-------GLG 222

Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
           +R+ N   PQLV  L+ V+       + ++     H+  L+ +G +Y FG G  GQLG  
Sbjct: 223 HRY-NQSVPQLVPHLQGVH-------IVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHG 274

Query: 366 LVNNQTERGNPERVD 380
           + +++     P RV+
Sbjct: 275 VSSDER---FPRRVE 286



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 56/237 (23%)

Query: 182 GCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
           G G  G+LG G    E   P L+E+F+   ++ V  A G  H+  VG+ G V  WG  + 
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSV--ACGEQHSMAVGETGDVYVWGRAKE 58

Query: 241 GCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG---------- 288
           G LG+G  +  +   P  V+ L   + +    G      V+  G +Y +G          
Sbjct: 59  GQLGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSA 118

Query: 289 ----------------------CGESASLGHNAIADGQGNRHANVL------------TP 314
                                  G S S  + A A G+     + +            +P
Sbjct: 119 NKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSP 178

Query: 315 QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
           ++VT L+ V  +VV+++   S      + A+T  G++Y++G  +K QLG+    NQ+
Sbjct: 179 EVVTGLQHV--KVVEVAAGYSF-----SLAVTSQGEVYSWGFNEKCQLGLGHRYNQS 228


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 22/215 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QIA G  + LAL+    G  +++ G  L G+LG G        P+ +E    +
Sbjct: 146 LQEKSIIQIACGDYHSLALS---KGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV 202

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G V +WG    G LG G+ + E  P +++ L++ +   +A
Sbjct: 203 PL--VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 260

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T +++ DG V++FG G+   LGHN+          N L P+LVT L     RV Q
Sbjct: 261 CGGSHTALLTTDGLVFTFGAGKYGQLGHNST--------QNELRPRLVTEL--AGNRVTQ 310

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+         HT A +++ GK+++FG+G +GQLG
Sbjct: 311 IACGRR-----HTLAYVSDLGKVFSFGSGKEGQLG 340



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 29/259 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ A G   ++ +S  G+++A+G++  G+   G     + T PQ VE L  + +
Sbjct: 146 LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT-PQAVEHLSGVPL 204

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQ 158
           VQ + G   +  LS  G VY  SWG +      LGH     D E  P L+ TL+N  V  
Sbjct: 205 VQISAGKAHSMALSMSGNVY--SWGRNDLGQLGLGH----TDGEDFPSLIETLDNQQVEF 258

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +A G  +   L     G+ V++ G G  G+LGH S  +E  PRL+   +L   +   +A 
Sbjct: 259 LACGGSHTALLTT--DGL-VFTFGAGKYGQLGHNSTQNELRPRLVT--ELAGNRVTQIAC 313

Query: 219 GAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP-----------KVVQALNDVKAI 266
           G  H  A V   G+V ++G G+ G LG+G    + +P           K     +D + +
Sbjct: 314 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELV 373

Query: 267 HVATGDYTTFVVSEDGDVY 285
            +A G+ +  +  E  + Y
Sbjct: 374 MIAGGNQSVLLWMEKKNPY 392



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ ++Q +AG   +M +S +G VY++G++  G+   G+  T     P L+E
Sbjct: 192 TPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQL--GLGHTDGEDFPSLIE 249

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   TA+L+ +G V+TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 250 TLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPR-LVTELAGNRV 308

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   ++  P
Sbjct: 309 TQIACGRRHTLAYVSDLG--KVFSFGSGKEGQLGNGGTHNQLIP 350


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 123/250 (49%), Gaps = 14/250 (5%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G   ++ ++  GQV+ +G   FG   + V   +L+  P+LV+ + N  +   A     
Sbjct: 162 ALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELL--PRLVQGISNEKIRHIATSGTH 219

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP------VVQIAAGYCYL 166
           TA ++  G VYT  WG D   G           P  G   +IP       V +AA +C  
Sbjct: 220 TAAITETGEVYT--WGRDE--GDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGG 275

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
              A       +++ G     +LG G++T    P+ I   +   ++ + +A+G +H+  +
Sbjct: 276 FFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLE--GVRVIQIASGGYHSLAL 333

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             +G+V +WG+G +G LGH + + + +P V+ AL D + +++A G  T+  ++++G +Y 
Sbjct: 334 TDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYM 393

Query: 287 FGCGESASLG 296
           +G  + + LG
Sbjct: 394 WGNAKDSQLG 403



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 28/316 (8%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           + G   + L+ D G ++ +GK   G   +G +    V  P L  +L     V  A+G   
Sbjct: 113 SCGLFHSALLVD-GNIWIWGKGDGGRLGFGHENPVFV--PTLNPNLDPAKCV--ALGGVH 167

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           +  L+  G+V+T+ +G    LGH     ++ P  L+  + N  +  IA    +  A+   
Sbjct: 168 SVALTSLGQVFTWGYGGFGALGHCVYHRELLPR-LVQGISNEKIRHIATSGTHTAAIT-- 224

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHP----RLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
                VY+ G   G            +      +  + + L +    V  G +  AV+ +
Sbjct: 225 -ETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFFTAVLTE 283

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           +G++  WG      LG GN+     PK +  L  V+ I +A+G Y +  ++++G V S+G
Sbjct: 284 EGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWG 343

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
            G    LGH +I         N   P ++ +L   ++RVV I+   S      + A+T+ 
Sbjct: 344 FGGHGQLGHPSI--------QNQKIPMVIDAL--ADQRVVYIACGGST-----SAAITDE 388

Query: 349 GKLYAFGAGDKGQLGI 364
           GKLY +G     QLG+
Sbjct: 389 GKLYMWGNAKDSQLGV 404



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 17/243 (6%)

Query: 30  LGREVNGTPLYCRSLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
           LG  V    L  R +QGI   +I   A     T  I++ G+VY +G+D          G 
Sbjct: 188 LGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGR 247

Query: 87  KL-----VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
                  ++ P  V++L  + V     G FFTAVL+ EG+++ +   ++  LG   +   
Sbjct: 248 GPNEGGGLSIPSKVKAL-TVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGG 306

Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
            +P P +  LE + V+QIA+G  + LAL  +     V S G G  G+LGH S  ++K P 
Sbjct: 307 WQPKP-IPNLEGVRVIQIASGGYHSLALTDE---GKVLSWGFGGHGQLGHPSIQNQKIPM 362

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-HGNEECESVP-KVVQA 259
           +I+   L + + V +A G   +A +  +G++  WG  +   LG  G  E +  P +VV  
Sbjct: 363 VID--ALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFL 420

Query: 260 LND 262
           + D
Sbjct: 421 MED 423



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 57/336 (16%)

Query: 67  QVYAFGKDSFGEAEYGVQGTKLVTSP-------------------QLVESLKNIFVVQAA 107
           Q+ ++G+ S G+   G++ T+L  SP                    L+++  +    Q A
Sbjct: 48  QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107

Query: 108 I------GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           I      G F +A+L  +G ++ +  G+  RLG   E N V    L   L+  P   +A 
Sbjct: 108 IEVGISCGLFHSALLV-DGNIWIWGKGDGGRLGFGHE-NPVFVPTLNPNLD--PAKCVAL 163

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + +AL    S   V++ G G  G LGH     E  PRL++     N +   +A    
Sbjct: 164 GGVHSVALT---SLGQVFTWGYGGFGALGHCVYHRELLPRLVQGIS--NEKIRHIATSGT 218

Query: 222 HAAVVGQDGRVCTWGWGR------YGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYT 274
           H A + + G V TWG          G     NE    S+P  V+AL  V    V  G + 
Sbjct: 219 HTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVFCGGFF 277

Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
           T V++E+G ++++G   +  LG       +GN+      P+ + +L+ V  RV+QI+   
Sbjct: 278 TAVLTEEGQIWNWGANSNYELG-------RGNKTGG-WQPKPIPNLEGV--RVIQIASGG 327

Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
                 H+ ALT+ GK+ ++G G  GQLG   + NQ
Sbjct: 328 -----YHSLALTDEGKVLSWGFGGHGQLGHPSIQNQ 358


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 89  PRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 MNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 319

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   ++ G VY +G C G+S  L H
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVVLPH 346



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE    I  + A      +A  ++ G VY   WG
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYM--WG 335


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 206
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   ++  P+L++  
Sbjct: 27  IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 82

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 83  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 141

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT +    + 
Sbjct: 142 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 200

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
                         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 201 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 240



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 12/220 (5%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G    K  TSPQL++SL  I
Sbjct: 28  KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGI 86

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
             +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I
Sbjct: 87  PFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYI 143

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      +A G
Sbjct: 144 CCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACG 198

Query: 220 AWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 199 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L++
Sbjct: 76  SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 133

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I V
Sbjct: 134 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 192

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            +IA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 193 TEIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           ++SL +I +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L 
Sbjct: 27  IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 84

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP +Q+AAG  + ++L L    SG A++  G    G+LG     D   P L++   L +
Sbjct: 85  GIPFMQVAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRS 137

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            + V +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A 
Sbjct: 138 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 197

Query: 271 G-DYTTFVVSEDGDVYSFGCGESASLG 296
           G  +T+  V   G +YSFG G +  LG
Sbjct: 198 GRQHTSAFVPSSGRIYSFGLGGNGQLG 224



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  +I+    G   T  ++  G V+ FG   +G+   G   T    +P+ V  
Sbjct: 129 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFE 186

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V + A G   T A +   GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 187 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 239


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 206
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G+   ++  P+L++  
Sbjct: 21  IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS- 76

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 77  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 135

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT +    + 
Sbjct: 136 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ- 194

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
                         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 195 --------------HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 234



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 12/220 (5%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G    K  TSPQL++SL  I
Sbjct: 22  KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK-QTSPQLLKSLLGI 80

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
             +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I
Sbjct: 81  PFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYI 137

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      +A G
Sbjct: 138 CCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACG 192

Query: 220 AWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 193 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L++
Sbjct: 70  SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 127

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I V
Sbjct: 128 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 186

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            +IA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 187 TEIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           ++SL +I +VQ A G + +  LS+   V  F WG +   +LG  T+        LL +L 
Sbjct: 21  IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 78

Query: 153 NIPVVQIAAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
            IP +Q+AAG  + ++L L    SG A++  G    G+LG     D   P L++   L +
Sbjct: 79  GIPFMQVAAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRS 131

Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
            + V +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A 
Sbjct: 132 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 191

Query: 271 G-DYTTFVVSEDGDVYSFGCGESASLG 296
           G  +T+  V   G +YSFG G +  LG
Sbjct: 192 GRQHTSAFVPSSGRIYSFGLGGNGQLG 218



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL+  +I+    G   T  ++  G V+ FG   +G+   G   T    +P+ V  
Sbjct: 123 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFE 180

Query: 98  LKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           L    V + A G   T A +   GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 181 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 233


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 26/234 (11%)

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQF 206
           + +L +I +VQ+A GY + LAL+       V+  G    G+LG G    ++  P+LI+  
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALS---KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS- 60

Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI 266
            LL +  + VAAG  H+ V+   G +  WG  ++G LG  +E    VP ++++L   K +
Sbjct: 61  -LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 119

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++  G+  T  ++++G V++FG G    LGHN+ +     R    L   +VT        
Sbjct: 120 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT-------- 171

Query: 327 VVQISLTNSIYWNAHTFALT-ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
             QI+         HT A    SG++Y+FG G  GQLG    +N+    T +GN
Sbjct: 172 --QIACGRQ-----HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 218



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 12/220 (5%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           +SL  I+I+Q A G   ++ +S A +V+ +G++ +G+   G+   K  TSPQL++SL  I
Sbjct: 6   KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK-QTSPQLIKSLLGI 64

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
             +Q A G   + VL+  G +  F WG +   +LG + E +   P+ LL +L +  +V I
Sbjct: 65  PFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYI 121

Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             G  +  AL  +     V++ G G  G+LGH S + E +PR +  F+L+      +A G
Sbjct: 122 CCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACG 176

Query: 220 AWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
             H +A V   GR+ ++G G  G LG G+      P  V+
Sbjct: 177 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P   +SL GI  +Q AAG   + +++ +G ++ +G++ FG+     +  + V  P L++
Sbjct: 54  SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV--PNLLK 111

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           SL++  +V    G   TA L++EG V+TF  G   +LGH++  +++ P  +   + +I V
Sbjct: 112 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-V 170

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            QIA G  +  A    PS   +YS G G  G+LG GS ++ K P  ++
Sbjct: 171 TQIACGRQHTSAFV--PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 10/205 (4%)

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 152
           ++SL +I +VQ A G + +  LS+   V  F WG +   +LG   +        L+ +L 
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            IP +Q+AAG  +   L    SG A++  G    G+LG     D   P L++   L + +
Sbjct: 63  GIPFMQVAAGGAHSFVLTL--SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQK 117

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG- 271
            V +  G  H A + ++G V T+G G YG LGH +   E  P+ V  L       +A G 
Sbjct: 118 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 177

Query: 272 DYTTFVVSEDGDVYSFGCGESASLG 296
            +T+  V   G +YSFG G +  LG
Sbjct: 178 QHTSAFVPSSGRIYSFGLGGNGQLG 202



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 3/114 (2%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
            P   +SL+  +I+    G   T  ++  G V+ FG   +G+   G   T    +P+ V 
Sbjct: 106 VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVF 163

Query: 97  SLKNIFVVQAAIGNFFT-AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
            L    V Q A G   T A +   GR+Y+F  G + +LG  +  N   P  + G
Sbjct: 164 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 217


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 106/219 (48%), Gaps = 21/219 (9%)

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  L G+ E +  V++A G  + LAL        VYS G G  G LGHG+      P ++
Sbjct: 26  PRFLRGSRE-LLFVRVACGSSHTLALTGSGD---VYSFGQGTFGALGHGTTESCSSPVIV 81

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
           +   L  L  V +A G  H+  +  +G++ +WG G+YG LG G+ E    P  V AL+D 
Sbjct: 82  DS--LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR 139

Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
               V  G   T  +  DG ++S+G G     GH            N+L P+LV SL+  
Sbjct: 140 LLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGT--------QDNILVPKLVCSLE-- 189

Query: 324 NERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
           N+ +VQ S         H  ALT  G +YA+G  ++GQ+
Sbjct: 190 NDNIVQASAGAR-----HAVALTSGGGVYAWGDNEQGQV 223



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 113/212 (53%), Gaps = 8/212 (3%)

Query: 25  GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
           G ++  G   +  P + R  + +  ++ A G+  T+ ++ +G VY+FG+ +FG   +G  
Sbjct: 13  GLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGT- 71

Query: 85  GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 144
            T+  +SP +V+SL  + +VQ A G+  +  L+ EG+++++  G   +LG  +  N ++P
Sbjct: 72  -TESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQP 130

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
            P+   L +  + Q+  G  Y +A+    S   ++S G G  G+ GHG++ +   P+L+ 
Sbjct: 131 VPVT-ALSDRLLTQVVCGADYTMAI---DSDGQLFSWGHGHWGQTGHGTQDNILVPKLVC 186

Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
             +  N+  V  +AGA HA  +   G V  WG
Sbjct: 187 SLENDNI--VQASAGARHAVALTSGGGVYAWG 216



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 20/189 (10%)

Query: 178 VYSVGCGLGGKLGHGSRT---DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCT 234
           + S GCG  G+LG            PR +   +   L  V VA G+ H   +   G V +
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSR--ELLFVRVACGSSHTLALTGSGDVYS 58

Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
           +G G +G LGHG  E  S P +V +L  +  + +A GD  +  ++ +G ++S+G G+   
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQ 118

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           LG  ++         N L P  VT+L   ++R+    LT  +    +T A+   G+L+++
Sbjct: 119 LGCGSV--------ENHLQPVPVTAL---SDRL----LTQVVCGADYTMAIDSDGQLFSW 163

Query: 355 GAGDKGQLG 363
           G G  GQ G
Sbjct: 164 GHGHWGQTG 172



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 18/142 (12%)

Query: 234 TWGWGRYGCLGHGNEE---CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
           +WG G +G LG  +        +P+ ++   ++  + VA G   T  ++  GDVYSFG G
Sbjct: 3   SWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62

Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
              +LGH            +  +P +V SL  +   +VQI+  ++     H+ ALT  G+
Sbjct: 63  TFGALGHGTTE--------SCSSPVIVDSLWGLG--IVQIACGDN-----HSCALTVEGQ 107

Query: 351 LYAFGAGDKGQLGIELVNNQTE 372
           L+++G G  GQLG   V N  +
Sbjct: 108 LFSWGRGKYGQLGCGSVENHLQ 129


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 149/302 (49%), Gaps = 27/302 (8%)

Query: 47  IRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGT----KLVTSPQLVESLKNI 101
           ++ + ++ G+ G T+ +++ G VY++G   +G+  +G   T    + +T P L +++K I
Sbjct: 431 VKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYI 490

Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
                  G   +A ++ +G++YT+  G+  RLGH        P  + G  E   V  +A 
Sbjct: 491 HA-----GYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAE---VGSVAC 542

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G  + L ++    G  V+S G G  GKLG G       P+++E  Q L +Q V   AG W
Sbjct: 543 GSSHTLVVS--KDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKV--CAGTW 598

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            +  +   G V TWG G    LG G+ +   ++P  V+ L   + + ++ GD     +++
Sbjct: 599 FSMALTTAGEVYTWGSG--AILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTD 656

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
           + +V+++G   + S+G      GQG+  + +  P  V  L+ V+ R +    ++S+ W +
Sbjct: 657 EHEVFAWG---TNSMGQC----GQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709

Query: 341 HT 342
            +
Sbjct: 710 MS 711



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 136/299 (45%), Gaps = 30/299 (10%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
           + +   VY +G +S  +   G Q   L+     V+S     V Q   G + T  +  +G 
Sbjct: 344 VYEKSDVYVWGSNSSHQLAEGNQEKILMP----VKSKMFTQVQQVEAGQYCTFAIHWDGS 399

Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLL--GTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
           V     G+  RLG     N   P  +L    ++ +   + + G+     LA   +G+ VY
Sbjct: 400 VSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGH----TLALAETGV-VY 454

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
           S G G  GKLGHG+    K P  I     L      + AG  H+A V  DG++ TWG G 
Sbjct: 455 SWGDGDYGKLGHGNCATHKQPERITG-PFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGD 513

Query: 240 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD-VYSFGCGESASLGHN 298
           +G LGHG+     VP  V  L +V +  VA G   T VVS+DG  V+SFG GE   LG  
Sbjct: 514 HGRLGHGDSNARYVPTQVAGLAEVGS--VACGSSHTLVVSKDGKTVWSFGSGEHGKLGTG 571

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
            +          V  PQ+V +L+ +      I    +  W   + ALT +G++Y +G+G
Sbjct: 572 EL--------GKVYRPQVVEALQGLT-----IQKVCAGTW--FSMALTTAGEVYTWGSG 615



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 152/348 (43%), Gaps = 30/348 (8%)

Query: 21   NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
            ++R+G+   LG   +  P+   S    R I    G   T +I   G V A G+ S+G   
Sbjct: 3334 SDRHGQLAELGYSAS-VPVQVESFSIARKI--ICGQNCTFVIQSDGTVLACGEGSYGRLG 3390

Query: 81   YGVQGTKLVTSPQLVESLKNIFVVQAAIG---NFFTAVLSREGRVYTFSWGNDARLGHHT 137
             G   +  + S  ++ SL+   +   A     +  +  L+  G V+++  G+  +LGH  
Sbjct: 3391 QG--NSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGN 3448

Query: 138  EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
                  P  +   L+   VVQ+A G+ +    A   S   +++ G G  GKLG GS  ++
Sbjct: 3449 PDRQRRPRQI-EALQTEQVVQVACGFKHS---AVVTSDGKLFTFGNGDFGKLGLGSVANK 3504

Query: 198  KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKV 256
            K P  +   +   +  V  A G  H A V  DG  V T+G G YG LG G    + +P+ 
Sbjct: 3505 KLPERVMALEGYRIGQV--ACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQK 3562

Query: 257  VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
            V+ + ++    V  G + T  +++DG V  F CG      H+        R   V  PQ+
Sbjct: 3563 VETVCNLGIKKVGCGTHLTLFLTKDGKV--FVCGIDRMPWHSLF------RERAVFKPQI 3614

Query: 317  VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
            +TSL          S+ +      H   LT  GK+  +G   +GQLG+
Sbjct: 3615 MTSLSDY-------SIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 29/325 (8%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KN 100
           +S    ++ Q  AG   T  I   G V A GK S+G    G    + +    L++ + K 
Sbjct: 374 KSKMFTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKK 433

Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
           +   + + G+  T  L+  G VY++  G+  +LGH       +P  + G      +  I 
Sbjct: 434 LSSSKGSDGH--TLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIH 491

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV-VVAAG 219
           AGY +  A+        +Y+ G G  G+LGHG       P      Q+  L  V  VA G
Sbjct: 492 AGYRHSAAVT---DDGKLYTWGEGDHGRLGHGDSNARYVPT-----QVAGLAEVGSVACG 543

Query: 220 AWHAAVVGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
           + H  VV +DG+ V ++G G +G LG G       P+VV+AL  +    V  G + +  +
Sbjct: 544 SSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL 603

Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
           +  G+VY++G G        AI  G+G+  A V  P  V  L Q   R+V IS  ++   
Sbjct: 604 TTAGEVYTWGSG--------AIL-GKGSADAIVNLPMYVEDLAQY--RIVDISAGDN--- 649

Query: 339 NAHTFALTESGKLYAFGAGDKGQLG 363
             H  ALT+  +++A+G    GQ G
Sbjct: 650 --HCLALTDEHEVFAWGTNSMGQCG 672



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 24/304 (7%)

Query: 43   SLQGIRIIQAAAGAG---RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
            SLQG  I   A   G    ++ ++++G+V+++G   FG+  +G    +    P+ +E+L+
Sbjct: 3405 SLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ--RRPRQIEALQ 3462

Query: 100  NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
               VVQ A G   +AV++ +G+++TF  G+  +LG  +  N   P  ++  LE   + Q+
Sbjct: 3463 TEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMA-LEGYRIGQV 3521

Query: 160  AAGYCYLLALAC-QPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
            A G   L   AC    GM V++ G G  GKLG G  T +  P+ +E   + NL    V  
Sbjct: 3522 ACG---LNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVE--TVCNLGIKKVGC 3576

Query: 219  GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
            G      + +DG+V   G  R        E     P+++ +L+D     +A G      +
Sbjct: 3577 GTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFL 3636

Query: 279  SEDGDVYSFGCGESASLG--HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            +  G V  +G      LG  H ++      RH     P+++T L     R +    T+S 
Sbjct: 3637 TTCGKVLGWGMTGEGQLGLPHVSLV-----RH-----PEIITELSDKGIRQISTGRTHSA 3686

Query: 337  YWNA 340
             W+A
Sbjct: 3687 AWSA 3690



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 34/253 (13%)

Query: 120  GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
            G+   + WG+D R G   E         LG   ++PV Q+ +       +  Q     + 
Sbjct: 3325 GKCKAYMWGSD-RHGQLAE---------LGYSASVPV-QVESFSIARKIICGQNCTFVIQ 3373

Query: 180  SVG----CGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRV 232
            S G    CG G  G+LG G+  D     +I   Q   +  +  + G+  H+  + + G V
Sbjct: 3374 SDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEV 3433

Query: 233  CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
             +WG G +G LGHGN + +  P+ ++AL   + + VA G   + VV+ DG +++FG G+ 
Sbjct: 3434 FSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDF 3493

Query: 293  ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG-KL 351
              LG  ++A+ +         P+ V +L+    R+ Q++   +     HT  ++  G  +
Sbjct: 3494 GKLGLGSVANKK--------LPERVMALE--GYRIGQVACGLN-----HTACVSTDGMTV 3538

Query: 352  YAFGAGDKGQLGI 364
            + FG GD G+LG+
Sbjct: 3539 WTFGEGDYGKLGL 3551



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 21/158 (13%)

Query: 225  VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG---DYTTFVVSED 281
            V+  DG V   G G YG LG GN +      V+ +L       +AT    D  +  ++E 
Sbjct: 3371 VIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAES 3430

Query: 282  GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
            G+V+S+G G+   LGH     G  +R      P+ + +L+   E+VVQ++         H
Sbjct: 3431 GEVFSWGDGDFGKLGH-----GNPDRQRR---PRQIEALQ--TEQVVQVACGFK-----H 3475

Query: 342  TFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
            +  +T  GKL+ FG GD G+LG+  V N   +  PERV
Sbjct: 3476 SAVVTSDGKLFTFGNGDFGKLGLGSVAN---KKLPERV 3510



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 83/188 (44%), Gaps = 21/188 (11%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           VY  G     +L  G++     P   + F     Q   V AG +    +  DG V   G 
Sbjct: 350 VYVWGSNSSHQLAEGNQEKILMPVKSKMFT----QVQQVEAGQYCTFAIHWDGSVSACGK 405

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
           G YG LG G    +S+PK +     VK +  + G D  T  ++E G VYS+G G+   LG
Sbjct: 406 GSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLG 465

Query: 297 H-NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           H N     Q  R   +  P L  ++K ++                H+ A+T+ GKLY +G
Sbjct: 466 HGNCATHKQPER---ITGPFLGKTIKYIHAGY------------RHSAAVTDDGKLYTWG 510

Query: 356 AGDKGQLG 363
            GD G+LG
Sbjct: 511 EGDHGRLG 518



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 13/237 (5%)

Query: 38   PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
            P    +LQ  +++Q A G   + +++  G+++ FG   FG+   G    K +  P+ V +
Sbjct: 3455 PRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKL--PERVMA 3512

Query: 98   LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
            L+   + Q A G   TA +S +G  V+TF  G+  +LG       + P   + T+ N+ +
Sbjct: 3513 LEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQK-VETVCNLGI 3571

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNLQPV 214
             ++  G  +L     +   + V    CG+     H    +     P+++      +++  
Sbjct: 3572 KKVGCG-THLTLFLTKDGKVFV----CGIDRMPWHSLFRERAVFKPQIMTSLSDYSIED- 3625

Query: 215  VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
             +A G  H   +   G+V  WG    G LG  +      P+++  L+D     ++TG
Sbjct: 3626 -LAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTG 3681



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
           P    +LQG+ I +  AG   +M ++ AG+VY +G  +    G A+       +V  P  
Sbjct: 579 PQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSAD------AIVNLPMY 632

Query: 95  VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
           VE L    +V  + G+     L+ E  V  F+WG ++      GH   P    P  ++G 
Sbjct: 633 VEDLAQYRIVDISAGDNHCLALTDEHEV--FAWGTNSMGQCGQGHTCSP-ITRPLKVIG- 688

Query: 151 LENIPVVQIAAGYCYLLA 168
           LE + + QI+AG  + +A
Sbjct: 689 LEGVSIRQISAGTSHSMA 706


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 37/338 (10%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
              G P+  + L G+  +  A GA  ++ +   G V+A+G +  G+   G    +   +P
Sbjct: 132 STRGDPVQVQGLSGVTTV--ALGATHSLALCYDGSVWAWGANDHGQLGDGTSIAR--RTP 187

Query: 93  QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
           Q+V  L+ +  V AA  N   AVLS +G V+ +    D +LG  T      P P+ G L 
Sbjct: 188 QMVAGLQEVVAV-AAGANHSLAVLS-DGTVWAWGENYDGQLGDGTTVTRRVPVPIQG-LS 244

Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
            I  V +A+G  + LAL    +   V++ G    G+LG GS      P  + +   +   
Sbjct: 245 GI--VAVASGTSHSLALRYDGN---VWAWGSNYSGQLGDGSSLSRSSPVQVTELSGI--- 296

Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
            V V  G  ++  V  DG V TWG   YG LG G     SVP     L+ V A  VA G 
Sbjct: 297 -VSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIARSVPVQTSGLSGVVA--VAAGR 353

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
                +  +  ++++G   +   G  +         +   +P+ +     +NE VV ++ 
Sbjct: 354 THALAMRANNSIWAWGGNVNGQRGDES--------RSVYFSPRTI-----LNE-VVTMAA 399

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           TN      H+ A+   G L+A+GA ++GQLG     N+
Sbjct: 400 TND-----HSLAVRSDGGLWAWGANNEGQLGDGTTKNR 432



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 138/321 (42%), Gaps = 27/321 (8%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           ++  AAG   ++ + D G ++A+G ++ G+   G   ++ +  P  V  +  I  V A  
Sbjct: 442 VVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTI--PMQVPGISGIASVAA-- 497

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+ ++  L  +  ++ +   +  +LG  T  N   P  + G L  I  V IA G  ++LA
Sbjct: 498 GSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG-LSGI--VAIATGNGHMLA 554

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +    +   V++ G    G+LG G+  +   P    Q Q+L+    V A  A H+  V  
Sbjct: 555 VRSNGT---VWAWGDNSSGQLGDGTTINRATP---VQVQVLSGIVAVAAGAA-HSLAVRY 607

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG +  WG      LG G      VP  VQ +    A+ V+   + +  V  DG ++ +G
Sbjct: 608 DGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIG--SAVAVSAAKHHSLAVLADGTLWDWG 665

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG N     Q N +    TP  VT+L  V E V     +       H+ AL   
Sbjct: 666 ANNYGQLGRN-----QDNTNP---TPSKVTTLTGVTEAVGTFGYSIGF---GHSLALRSD 714

Query: 349 GKLYAFGAGDKGQLGIELVNN 369
           G L  +G    GQLG  +  N
Sbjct: 715 GYLVGWGHNTYGQLGTGVPEN 735



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 29/255 (11%)

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G+ F+  +  +G V+ +   +D +LG  T     +P  + G      V  +A G  + LA
Sbjct: 102 GDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLSG---VTTVALGATHSLA 158

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    S   V++ G    G+LG G+    + P+++   Q    + V VAAGA H+  V  
Sbjct: 159 LCYDGS---VWAWGANDHGQLGDGTSIARRTPQMVAGLQ----EVVAVAAGANHSLAVLS 211

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V  WG    G LG G      VP  +Q L+ + A  VA+G   +  +  DG+V+++G
Sbjct: 212 DGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLSGIVA--VASGTSHSLALRYDGNVWAWG 269

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
              S  LG     DG     +   +P  VT L  +      +S+        ++ A+   
Sbjct: 270 SNYSGQLG-----DGSSLSRS---SPVQVTELSGI------VSVEGG---PDYSMAVRYD 312

Query: 349 GKLYAFGAGDKGQLG 363
           G ++ +G    GQLG
Sbjct: 313 GTVWTWGINTYGQLG 327



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 44/343 (12%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P+  + L GI  +  A+G   ++ +   G V+A+G +  G+   G   ++  +SP  V  
Sbjct: 237 PVPIQGLSGI--VAVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSR--SSPVQVTE 292

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  I  V+   G  ++  +  +G V+T+      +LG  T      P    G      VV
Sbjct: 293 LSGIVSVEG--GPDYSMAVRYDGTVWTWGINTYGQLGDGTTIARSVPVQTSGLSG---VV 347

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +AAG  + LA+    S   +++ G  + G+ G  SR+    PR I     LN + V +A
Sbjct: 348 AVAAGRTHALAMRANNS---IWAWGGNVNGQRGDESRSVYFSPRTI-----LN-EVVTMA 398

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV 277
           A   H+  V  DG +  WG    G LG G  +    P  V  L +V  + VA G   +  
Sbjct: 399 ATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEV--LGNV--VSVAAGRRHSLA 454

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           V +DG ++++G      LG     DG G             S + +  +V  IS   S+ 
Sbjct: 455 VRDDGSLWAWGSNTVGQLG-----DGTG-------------SSRTIPMQVPGISGIASVA 496

Query: 338 WNA-HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             + ++ AL     L+A+G    GQLG     N   R  P RV
Sbjct: 497 AGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN---RHVPTRV 536


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 28/256 (10%)

Query: 111 FFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
           FF  V++  GR+Y F    WG    LGH    N  +P  + G L++  VV+IA G  + +
Sbjct: 40  FFDVVITENGRLYVFGANDWGQLG-LGHRKSVN--KPSSVKG-LKHAGVVKIACGRVHTI 95

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           AL        ++S G G  G+LG G     + PR+IE+ +  +   ++++ G  H+A + 
Sbjct: 96  ALT---KDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDY--LLLSCGTDHSAALT 150

Query: 228 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
             G +  WG G  G LGHG +    +P+ +     V+   V+ G Y T +++ED  +Y+F
Sbjct: 151 ASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRM--VSCGYYHTALLTEDKKLYTF 208

Query: 288 GCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTE 347
           G GE   LG      G       V  PQ V+      E V  +S       NAHT A+TE
Sbjct: 209 GEGEGGKLGLGEAHLG------GVNEPQHVSFF---TEPVDSVSC-----GNAHTAAITE 254

Query: 348 SGKLYAFGAGDKGQLG 363
            G +Y FG G  GQLG
Sbjct: 255 KGHVYTFGNGASGQLG 270



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 37/311 (11%)

Query: 60  MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 119
           ++I++ G++Y FG + +G+   G+   K V  P  V+ LK+  VV+ A G   T  L+++
Sbjct: 43  VVITENGRLYVFGANDWGQ--LGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKD 100

Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
             +++F  G + +LG         P  ++  LE    + ++ G  +  AL    SG  +Y
Sbjct: 101 RHLHSFGAGGEGQLGVGDSKQYEAPR-MIEELEEQDYLLLSCGTDHSAALTA--SG-TLY 156

Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
             G G  G+LGHG  T+ + PR +     + +   +V+ G +H A++ +D ++ T+G G 
Sbjct: 157 MWGGGSEGQLGHGEDTEVQIPRELS----MGVPVRMVSCGYYHTALLTEDKKLYTFGEGE 212

Query: 240 YGC-------LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
            G        LG  NE     P+ V    +     V+ G+  T  ++E G VY+FG G S
Sbjct: 213 GGKLGLGEAHLGGVNE-----PQHVSFFTE-PVDSVSCGNAHTAAITEKGHVYTFGNGAS 266

Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
             LGH       G  H     P+ V  L+    + V          + HT  +T  G LY
Sbjct: 267 GQLGH-------GPDHLETNIPKRVARLEWTRCKWVSCG-------DCHTAIVTAKGCLY 312

Query: 353 AFGAGDKGQLG 363
            FG G  G+LG
Sbjct: 313 TFGDGRHGKLG 323



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P     L+    +  + G   +  ++ +G +Y +G  S G+  +G       T  Q+   
Sbjct: 125 PRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGED-----TEVQIPRE 179

Query: 98  LK-NIFVVQAAIGNFFTAVLSREGRVYTFSWGND-------ARLGHHTEPNDVEPHPLLG 149
           L   + V   + G + TA+L+ + ++YTF  G         A LG   EP  V       
Sbjct: 180 LSMGVPVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHV------- 232

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 208
           +    PV  ++ G  +  A+  +     VY+ G G  G+LGHG    E + P+ + + + 
Sbjct: 233 SFFTEPVDSVSCGNAHTAAITEK---GHVYTFGNGASGQLGHGPDHLETNIPKRVARLEW 289

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAI 266
              +   V+ G  H A+V   G + T+G GR+G LG G E   +V  P  V   N     
Sbjct: 290 TRCK--WVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVHRFNGFLVE 347

Query: 267 HVATGDYTTFV 277
            V+ G   T V
Sbjct: 348 EVSCGGCHTLV 358



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 15/92 (16%)

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
           +   V++E+G +Y FG  +   LG        G+R + V  P  V  LK     VV+I+ 
Sbjct: 40  FFDVVITENGRLYVFGANDWGQLG-------LGHRKS-VNKPSSVKGLKHAG--VVKIAC 89

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                   HT ALT+   L++FGAG +GQLG+
Sbjct: 90  -----GRVHTIALTKDRHLHSFGAGGEGQLGV 116


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 55/297 (18%)

Query: 89  VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL--------------- 133
           V   ++ E +K+  +   + G+  T V++ +G ++ F  G   +L               
Sbjct: 257 VNKTEINEEIKD-GIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSK 315

Query: 134 ------GHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
                 G+    N  EP  LL        +Q+A G  + +AL        +++ G    G
Sbjct: 316 IQKGQLGNENFVNVYEPTELL-VWPKRKFIQVACGSSHSMALT---DNGQIFTWGKNTRG 371

Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
           +LG G R D+  P +I    ++ +    + +G  H+A +  +  + TWG G+Y  LGHG 
Sbjct: 372 QLGQGHRNDQLKPTMI----IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV 427

Query: 248 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNR 307
              E  PK V  L DV   HV+ G   T  ++ +G VY++G G S  LG       + N+
Sbjct: 428 TTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQ-----ENNK 482

Query: 308 HANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
             ++ T            RV    L        H+ ALT+ G LY++G+   G LGI
Sbjct: 483 SLHLPT------------RVSAGGL--------HSMALTDQGILYSWGSSKGGVLGI 519



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 114/222 (51%), Gaps = 24/222 (10%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
           + IQ A G+  +M ++D GQ++ +GK++ G+   G +  +L  +  ++E    +      
Sbjct: 342 KFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIIIE----VMATSIC 397

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G+  +A +S E  +YT+  G   RLGH    +++ P  ++  LE++ V  ++ G  + L
Sbjct: 398 SGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVV-VLEDVYVTHVSCGMTHTL 456

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
           A+  +     VY+ G G+ GKLG           + E  + L+L P  V+AG  H+  + 
Sbjct: 457 AITNEG---FVYAWGDGMSGKLG-----------VQENNKSLHL-PTRVSAGGLHSMALT 501

Query: 228 QDGRVCTWGWGRYGCLGHG----NEECESVPKVVQALNDVKA 265
             G + +WG  + G LG G    N++C S+P+ ++ +  +++
Sbjct: 502 DQGILYSWGSSKGGVLGIGFQRDNKDCYSLPQKIRTVAKIQS 543



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 22/195 (11%)

Query: 188 KLGHGSRTDEKHPRLIEQFQLL---NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
           K+  G   +E    + E  +LL     + + VA G+ H+  +  +G++ TWG    G LG
Sbjct: 315 KIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLG 374

Query: 245 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
            G+   +  P ++  + +V A  + +GD  +  +S++ ++Y++G G+   LGH    D  
Sbjct: 375 QGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDE- 431

Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                  L P+ V  L+ V    V   +T       HT A+T  G +YA+G G  G+LG+
Sbjct: 432 -------LYPKKVVVLEDVYVTHVSCGMT-------HTLAITNEGFVYAWGDGMSGKLGV 477

Query: 365 ELVNNQTERGNPERV 379
           +   N      P RV
Sbjct: 478 Q--ENNKSLHLPTRV 490



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 21/168 (12%)

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVAT-GDYTTFVVS 279
           HA  +   G   +WG  +Y  LG G   +   +P+ +Q   + K I ++T  D  + +++
Sbjct: 800 HAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMSTCSDRFSALLT 859

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           + G++++FG  +S  LGH+     + N +       +V+  K +N+    I L +     
Sbjct: 860 DKGEIWTFGTSDSGVLGHD-----EKNYY-------VVSEPKMINDIPPMIFLASG---P 904

Query: 340 AHTFALTESGK-LYAFGAGDKGQLGIELVNNQTERGN--PERVDIDLS 384
               A+TE  + +YA+G    GQLGI++ NN        P+ +DID S
Sbjct: 905 QGMMAITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPD-IDIDDS 951



 Score = 45.8 bits (107), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 22/118 (18%)

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASL-----------GHNAIADGQ-GNRH-ANVLT 313
           HV+ G + T V+++ G ++ FG G    L             + I  GQ GN +  NV  
Sbjct: 272 HVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNVYE 331

Query: 314 P-QLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           P +L+   K+   + +Q++  +S     H+ ALT++G+++ +G   +GQLG    N+Q
Sbjct: 332 PTELLVWPKR---KFIQVACGSS-----HSMALTDNGQIFTWGKNTRGQLGQGHRNDQ 381



 Score = 40.4 bits (93), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIFVVQA 106
           +II  +      + IS  G  Y++G + + +   G    K    PQ ++ +L+   ++ +
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMS 848

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI-PVVQIAAGYCY 165
              + F+A+L+ +G ++TF   +   LGH  +   V   P +  + +I P++ +A+G   
Sbjct: 849 TCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKM--INDIPPMIFLASGPQG 906

Query: 166 LLALACQPSGMAVYSVGCGLGGKLG 190
           ++A+  Q     +Y+ G  L G+LG
Sbjct: 907 MMAITEQKR--QIYAWGNNLYGQLG 929


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 MSIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 319

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   S+ G VY +G C G+S  L H
Sbjct: 320 HTSAAKSQGGHVYMWGQCRGQSVILPH 346



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   + +A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE    I  + A      +A  S+ G VY   WG
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKSQGGHVYM--WG 335


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL   +I   + G+G   +L +  G+V+ +G + + +   G     LV   Q+  
Sbjct: 65  PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPC-QVST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G VY + + N  ++G  +  N   P  + G L+N  V
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q   V
Sbjct: 184 VNIACG--QMCSVAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQR--V 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTT 275
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  VV   + +  I      +T+
Sbjct: 239 ACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTS 298

Query: 276 FVVSEDGDVYSFG-C-GESASLGH 297
              ++ G VY +G C G+S  L H
Sbjct: 299 AAKTQGGHVYMWGQCRGQSVILPH 322



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 16/165 (9%)

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK-VVQALNDVKAI 266
           L N Q + VA G++H+ V+  DG V  WG+   G +G G+   +++P+ V   L +   +
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 184

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
           ++A G   +  V + G+VY +G   +  LG  +          N  TP  V +L+ +  +
Sbjct: 185 NIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS--------SGNQPTPCRVAALQGIRVQ 236

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQT 371
            V           AHT  LT+ G++YA+GA   GQLG    +NQ+
Sbjct: 237 RVACGF-------AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 274



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 223 TPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
               I  + A      +A  ++ G VY   WG
Sbjct: 283 K-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 311



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 22/142 (15%)

Query: 241 GCLGHGNEECESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
           GCLG G+ +    P+ + +L+D K   +   +G +     +E         GE  + GHN
Sbjct: 52  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTE---------GEVFTWGHN 102

Query: 299 AIAD-GQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAG 357
                G G  +  ++  Q+ T+L   N++V++++       + H+  LT  G++YA+G  
Sbjct: 103 GYTQLGNGTTNHGLVPCQVSTNLS--NKQVIEVACG-----SYHSLVLTSDGEVYAWGYN 155

Query: 358 DKGQLGIELVNNQTERGNPERV 379
           + GQ+G     NQ     P RV
Sbjct: 156 NSGQVGSGSTANQ---AIPRRV 174


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 52/324 (16%)

Query: 83  VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPN 140
           V GT  ++ P+L++S + + V   A G    A+++++G+V  FSWG  N  RLGH T  +
Sbjct: 7   VSGTN-ISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKV--FSWGEENGGRLGHKTSDS 63

Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
             +P  ++ +L + P+  IA G  Y  A++   SG  +Y  G G+   LG  +   ++ P
Sbjct: 64  VSDPK-IIDSLASTPMKTIALGAKYTCAVSV--SG-ELYEWGEGIHS-LGFKNNQCQRSP 118

Query: 201 ----RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKV 256
               +LI     +++    +A G WH A+V   G++ T+G G +G LGHG+      PK 
Sbjct: 119 WFPHKLIRTSDGISV--AKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKE 176

Query: 257 VQALNDVKAIHVATGDYTTFVVSED----------GDVYSFGCGESASLGHN-------- 298
           V++L  ++   VA G + T  + E           G ++++G      LGH         
Sbjct: 177 VESLRGLRVKSVACGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVP 236

Query: 299 ----AIADGQ-------------GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW-NA 340
               ++ D                  H  +  P+  ++   + E  ++      I   N+
Sbjct: 237 TRVESLIDCDFTQVSCGVVFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSGNS 296

Query: 341 HTFALTESGKLYAFGAGDKGQLGI 364
           H   LT +GK++ +G G +GQLG+
Sbjct: 297 HVAVLTMNGKVFTWGKGTEGQLGL 320



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 31/256 (12%)

Query: 42  RSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 101
           R+  GI + + A G   T ++S  G+++ +G  +FG   +G   T+ V  P+ VESL+ +
Sbjct: 126 RTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHG--DTRSVVQPKEVESLRGL 183

Query: 102 FVVQAAIGNFFTA-VLSREGRVYT-------FSWGNDA--RLGHHTEPNDVEPHPLLGTL 151
            V   A G + TA ++   G   +       F+WGN +  +LGH  + + + P   + +L
Sbjct: 184 RVKSVACGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVP-TRVESL 242

Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
            +    Q++ G               V+++G    G+LG+  R+D     ++E    L  
Sbjct: 243 IDCDFTQVSCG--------------VVFTIGSKDHGQLGN-PRSDSACICMVEG--PLKT 285

Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
           + V  +++G  H AV+  +G+V TWG G  G LG G+    + P +V+AL D +   +  
Sbjct: 286 EFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSIVC 345

Query: 271 GDYTTFVVSEDGDVYS 286
               T V+   G++ S
Sbjct: 346 SSNFTAVICVHGEISS 361



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 14/174 (8%)

Query: 190 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE 249
           GH S T+   PRL++  Q+L++Q   +A G  HAA+V + G+V +WG    G LGH   +
Sbjct: 5   GHVSGTNISLPRLLKSSQILDVQS--IACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSD 62

Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
             S PK++ +L       +A G   T  VS  G++Y +G G   SLG     + Q  R  
Sbjct: 63  SVSDPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEG-IHSLG---FKNNQCQR-- 116

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              +P     L + ++    IS+        HT  ++ +GKL+ +G G  G LG
Sbjct: 117 ---SPWFPHKLIRTSD---GISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLG 164


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 33/315 (10%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I   ++G   T  +   G V+++G + +G+   G +  +  ++P  V  L  +  +  A 
Sbjct: 450 ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDR--STPVQVPGLTGVTSI--AT 505

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G++ +  L   G V+ + +    +LG  T  +  +P  + G L NI  V IAAG  + LA
Sbjct: 506 GDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSG-LTNI--VSIAAGGGHSLA 562

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    +   V++ G    G+LG+G+RT    P  ++   L N+  V +AAG  ++  +  
Sbjct: 563 LRSDGT---VWAFGYNFDGQLGNGTRTWTILP--VQAVGLGNV--VSLAAGKMYSLALRA 615

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG V  WG+   G LG G  +  +VP  V  L+ + +I   T  Y +  +  DG V+++G
Sbjct: 616 DGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGT--YHSLALRSDGWVWAWG 673

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG N  +D       N LTP LV S+                  + H+ A+   
Sbjct: 674 FNFEGQLG-NGTSD-------NRLTPGLVVSMSNATAIFAG---------DLHSLAVRAD 716

Query: 349 GKLYAFGAGDKGQLG 363
           G L+A+G    GQLG
Sbjct: 717 GTLWAWGLNSHGQLG 731



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 156/371 (42%), Gaps = 54/371 (14%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           PL+     G+ ++   AG   ++ +   G  +++G + FG+   G    +   +P  V  
Sbjct: 342 PLHAGMTGGVTLV---AGFRHSVALGADGTAWSWGDNVFGQ--LGDTTFQPRMAPVQVTG 396

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L  +    A  G   T +L   GR++ +   N  +LG+ T+ N   P P+        + 
Sbjct: 397 LA-LGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV----NLTGIT 451

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-V 216
            +++G+ +  AL    +   V+S G    G+LG G+RTD   P      Q+  L  V  +
Sbjct: 452 SVSSGHRHTAALRLDGT---VWSWGTNQYGQLGDGTRTDRSTP-----VQVPGLTGVTSI 503

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A G +H+  +  +G V  WG+ RYG LG G     + P  V  L ++  + +A G   + 
Sbjct: 504 ATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLTNI--VSIAAGGGHSL 561

Query: 277 VVSEDGDVYSFGCGESASLGH----------------NAIADGQGNRHANVL-------- 312
            +  DG V++FG      LG+                N ++   G  ++  L        
Sbjct: 562 ALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLGNVVSLAAGKMYSLALRADGTVWA 621

Query: 313 -----TPQLVTSLKQVNERVVQIS----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + QL     Q +   +Q+S    +T+      H+ AL   G ++A+G   +GQLG
Sbjct: 622 WGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNFEGQLG 681

Query: 364 IELVNNQTERG 374
               +N+   G
Sbjct: 682 NGTSDNRLTPG 692



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 108/260 (41%), Gaps = 29/260 (11%)

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
           V+ A+G + +  +  EG V+ + +    +LG  T  +   P  + G       V +AAG 
Sbjct: 53  VRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVAS---AVSVAAGD 109

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
            Y LAL        V++ G    G+LG G+ T    PR +        Q V +A+G  HA
Sbjct: 110 QYSLALDENGD---VWAWGDNASGQLGDGTLTPRAQPRRVSGLT----QGVSLASGFAHA 162

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             +  DG V  WG  R   LG        VP  V  L+D+  + V  G  ++  +  DG 
Sbjct: 163 VALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDI--VAVVAGGSSSLALRADGT 220

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V+++G      LG     DG   R A    P  V +L  V        ++   Y   H  
Sbjct: 221 VWAWGDNRYGQLG-----DGTTVRRA---APVRVANLDAVTH------ISAGAY---HAL 263

Query: 344 ALTESGKLYAFGAGDKGQLG 363
           AL   G  +A+G    GQLG
Sbjct: 264 ALRADGTAWAWGYNAFGQLG 283



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 148/350 (42%), Gaps = 56/350 (16%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           +  AAG   ++ + + G V+A+G ++ G+   G    +    P+ V  L     V  A G
Sbjct: 103 VSVAAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPR--AQPRRVSGLTQ--GVSLASG 158

Query: 110 NFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
                 L  +G V+  +WG++   +LG  T      P P+ G  +   +V + AG    L
Sbjct: 159 FAHAVALRADGTVW--AWGDNRSNQLGSATLTRSPVPIPVPGLSD---IVAVVAGGSSSL 213

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVV 226
           AL    +   V++ G    G+LG G+      P      ++ NL  V  ++AGA+HA  +
Sbjct: 214 ALRADGT---VWAWGDNRYGQLGDGTTVRRAAP-----VRVANLDAVTHISAGAYHALAL 265

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
             DG    WG+  +G LG G     ++P V+  L + +   V  G+Y +  V  DG V++
Sbjct: 266 RADGTAWAWGYNAFGQLGDGTTVQRTLP-VLIGLTETRT--VVAGNYHSLAVRTDGAVWA 322

Query: 287 FGCGESASLG-----------HNAIADG----QGNRHANVLTP-------------QLVT 318
           +G      LG           H  +  G     G RH+  L               QL  
Sbjct: 323 WGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGD 382

Query: 319 SLKQVNERVVQIS-----LTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           +  Q     VQ++       ++     HT  L  +G+L+A+G  ++GQLG
Sbjct: 383 TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLG 432



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
           + Q     L PV +A G +H+  V  +G V  WG+ R G LG G  + ++ P  VQ    
Sbjct: 42  VRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAP--VQVAGV 99

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
             A+ VA GD  +  + E+GDV+++G   S  LG     DG     A    P+ V+ L Q
Sbjct: 100 ASAVSVAAGDQYSLALDENGDVWAWGDNASGQLG-----DGTLTPRAQ---PRRVSGLTQ 151

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                  +SL +     AH  AL   G ++A+G     QLG
Sbjct: 152 ------GVSLASGF---AHAVALRADGTVWAWGDNRSNQLG 183



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 14/212 (6%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+  AAG G ++ +   G V+AFG +  G+   G +   ++  P     L N  VV  A 
Sbjct: 550 IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTIL--PVQAVGLGN--VVSLAA 605

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G  ++  L  +G V+ + +    +LG  T      P  + G      +  I AG  + LA
Sbjct: 606 GKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSA---ITSITAGTYHSLA 662

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           L    S   V++ G    G+LG+G+  +   P L+            + AG  H+  V  
Sbjct: 663 L---RSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRA 715

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
           DG +  WG   +G LG G+      P  VQ L
Sbjct: 716 DGTLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 38/331 (11%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+   AG   ++ +   G V+A+G + +G+   G   T    +P  V +L  +  + A  
Sbjct: 202 IVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGT--TVRRAAPVRVANLDAVTHISA-- 257

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLA 168
           G +    L  +G  + + +    +LG  T      P  L+G  E   VV   AG  + LA
Sbjct: 258 GAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLP-VLIGLTETRTVV---AGNYHSLA 313

Query: 169 LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
           +       AV++ G     +LG G+ T    P             V + AG  H+  +G 
Sbjct: 314 VRTDG---AVWAWGDNRYRQLGTGNLTSSAVP-----LHAGMTGGVTLVAGFRHSVALGA 365

Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
           DG   +WG   +G LG    +    P  V  L   +A    +G   T ++  +G ++++G
Sbjct: 366 DGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRA-DATSGQLHTVMLGANGRLWAWG 424

Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
                 LG+         +++++  P  +T +  V+              + HT AL   
Sbjct: 425 DNNQGQLGNGT------QQNSSLPLPVNLTGITSVSSG------------HRHTAALRLD 466

Query: 349 GKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
           G ++++G    GQLG      +T+R  P +V
Sbjct: 467 GTVWSWGTNQYGQLGD---GTRTDRSTPVQV 494


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 9/258 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   ++L+ + +   + G   ++ +   G+V+A+G  S G+   G +  +L  +P  V++
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMKVKA 122

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 155
           L  I ++Q + G++ +  LS++G+V  FSWGN++  +LG   E    E    + +LE IP
Sbjct: 123 LAGIKIIQVSCGHYHSLALSQDGQV--FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIP 180

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
           + Q+AAG  +  AL+   +     S   G     G+        PR I   + L +  V 
Sbjct: 181 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGV--VY 238

Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
           ++ G+ H AV+ QDG+V T+G    G LGHG    +  P++V+ ++ + +  +  G Y T
Sbjct: 239 ISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVS-QIDCGSYHT 297

Query: 276 FV-VSEDGDVYSFGCGES 292
            V V     V SFG G S
Sbjct: 298 LVYVYTTRQVISFGRGPS 315



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 21/277 (7%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G  + QAA+G   ++L+   G V+A G +S G+   G +G      P L+++L+ + V  
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDL 77

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 164
            + G   +  +  +GRV+ +  G++ +LG   E  ++   P+ +  L  I ++Q++ G+ 
Sbjct: 78  LSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           + LAL+       V+S G    G+LG G     ++ P+ ++  + + L    VAAG  H+
Sbjct: 137 HSLALS---QDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPL--AQVAAGGAHS 191

Query: 224 AVVGQDGRVCTWGWGRYG--CLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSE 280
             +   G    WG    G   L   N   +S  P+ + AL ++  ++++ G   T V+++
Sbjct: 192 FALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLV 317
           DG V++FG   S  LGH   A+ +G        PQLV
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRG--------PQLV 280



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 17/204 (8%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
            V++ G    G+LG       K P LI+  + LN+   +++ G  H+  V   GRV  WG
Sbjct: 41  TVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVD--LLSCGKEHSLAVCHKGRVFAWG 98

Query: 237 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
            G  G LG G  +E    P  V+AL  +K I V+ G Y +  +S+DG V+S+G      L
Sbjct: 99  AGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQL 158

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G        G    +  +PQ V SL+        I L       AH+FAL+ SG  + +G
Sbjct: 159 G-------LGKEFLSQESPQRVKSLEG-------IPLAQVAAGGAHSFALSLSGTSFGWG 204

Query: 356 AGDKGQLGIELVNNQTERGNPERV 379
           + + GQL +   N   +   P  +
Sbjct: 205 SNNAGQLALSGNNVPVQSYKPRSI 228



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 22/260 (8%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+N TP+  ++L GI+IIQ + G   ++ +S  GQV+++G +S G+   G +      S
Sbjct: 111 KELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLS-QES 169

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-----ARLGHHTEPNDVEPHP 146
           PQ V+SL+ I + Q A G   +  LS  G   +F WG++     A  G++      +P  
Sbjct: 170 PQRVKSLEGIPLAQVAAGGAHSFALSLSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRS 227

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            +G L+ + VV I+ G  +   L        V++ G    G+LGHG   +++ P+L+E  
Sbjct: 228 -IGALKELGVVYISCGSEHTAVLT---QDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGI 283

Query: 207 QLLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLGHGNEEC----ESVPKVVQA-- 259
             L  Q   +  G++H  V V    +V ++G G          +       V  ++ A  
Sbjct: 284 DGLVSQ---IDCGSYHTLVYVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCLISADD 340

Query: 260 LNDVKAIHVATGDYTTFVVS 279
           L +V+  H+  G Y  FV +
Sbjct: 341 LVNVQVKHIFAGTYANFVTT 360



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 40/271 (14%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           QAA G   + +L  +G V+     +  +LG    P+   P  L+  LE + V  ++ G  
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPG-LIQALETLNVDLLSCGKE 83

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA------ 218
           + LA+ C      V++ G G  G+LG G            +F+ LN  P+ V A      
Sbjct: 84  HSLAV-CHKG--RVFAWGAGSEGQLGIG------------EFKELNFTPMKVKALAGIKI 128

Query: 219 -----GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGD 272
                G +H+  + QDG+V +WG   +G LG G E   +  P+ V++L  +    VA G 
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
             +F +S  G  + +G   +  L  +       N       P+ + +LK++   VV IS 
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSG-----NNVPVQSYKPRSIGALKELG--VVYISC 241

Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
            +      HT  LT+ GK++ FG    GQLG
Sbjct: 242 GSE-----HTAVLTQDGKVFTFGDNSSGQLG 267


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 98  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 156

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 157 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 216

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 217 MNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 271

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 272 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 328

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S  L H+       +  A   TP +   L  V
Sbjct: 329 HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSV 381



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 129 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 187

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 188 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 247

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 248 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 292

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 293 NSYGQLGTGNKSNQS 307



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G 
Sbjct: 243 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 302

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHT 137
           +  +   +P +VE    I  + A      +A  ++ G VY +    G    L HHT
Sbjct: 303 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHT 357


>gi|255731754|ref|XP_002550801.1| protein RCC1 [Candida tropicalis MYA-3404]
 gi|240131810|gb|EER31369.1| protein RCC1 [Candida tropicalis MYA-3404]
          Length = 496

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 49/364 (13%)

Query: 39  LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--------- 89
           L    L G +I+  A G   T+ +    +V+++G +  G         K V         
Sbjct: 86  LTEEKLNGTKIVDFAVGGMHTLALDGKNRVWSWGGNDSGVLGRDTSQAKEVLKDMDADAS 145

Query: 90  ------------TSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWG----NDAR 132
                       ++P LVE+L K+  +VQ A  +  +AVL   G VY  +WG    N+  
Sbjct: 146 DDDEDGDLNEAESTPGLVENLPKDSSIVQLAATDNLSAVLLDNGDVY--AWGCFRCNEGL 203

Query: 133 LGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           LG   +   ++  PL +  L+NI  VQ+AAG  +LLAL    S   VY+ G G   +LG 
Sbjct: 204 LGFLRDEIKIQKTPLKIKELKNI--VQLAAGKDHLLAL---DSKGIVYAWGNGQQYQLGR 258

Query: 192 GSRTDEKHP-RLIE--QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG--CLGHG 246
             R  E+H  R +E  QF L N++   +A+G +H   +     V  WG  +YG   L   
Sbjct: 259 --RILERHRFRSLEPQQFGLYNIK--YIASGDFHCFAIDHADNVYAWGLNQYGQCALTGA 314

Query: 247 NEECE-----SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           N E E     + P +++ L+ +K   +A G++ T  +++DG VYS+G  +   +G     
Sbjct: 315 NGELEDGSVLTKPTIIEELSKLKIKQIAAGEHHTLALTDDGHVYSWGRLDMKEIGIPTDK 374

Query: 302 DGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI-YWNAHTFALTESGKLYAFGAGDKG 360
             +         P+ V +  ++     +  L  +I   + H+FA+T+ G +YA+G  +  
Sbjct: 375 LPESTFKDQHGKPRSVPTPTKIEFNAKKDILIKTIGVGSHHSFAVTDDGFVYAWGFAETY 434

Query: 361 QLGI 364
            +G+
Sbjct: 435 GVGL 438



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 159/393 (40%), Gaps = 74/393 (18%)

Query: 16  RPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS 75
           R    N +NG + L       +     S   +  I  +     T L      ++ +G  S
Sbjct: 8   RKSEANGKNGTKKLKTGSFATSSFILHSYSKLPNINESPKTKTTPL-----DIFVWGTGS 62

Query: 76  FGEAEYGVQG-TKLVTSPQL-----VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 129
             E   G     K V  P+L      E L    +V  A+G   T  L  + RV+++   +
Sbjct: 63  MCELGLGPDSKNKEVKRPRLNPFLTEEKLNGTKIVDFAVGGMHTLALDGKNRVWSWGGND 122

Query: 130 DARLGHHTEP---------------------NDVEPHPLLGTLENIP----VVQIAAGYC 164
              LG  T                       N+ E  P  G +EN+P    +VQ+AA   
Sbjct: 123 SGVLGRDTSQAKEVLKDMDADASDDDEDGDLNEAESTP--GLVENLPKDSSIVQLAA--T 178

Query: 165 YLLALACQPSGMAVYSVGC-----GLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
             L+     +G  VY+ GC     GL G L    +  +K P  I++ + +    V +AAG
Sbjct: 179 DNLSAVLLDNG-DVYAWGCFRCNEGLLGFLRDEIKI-QKTPLKIKELKNI----VQLAAG 232

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGH---GNEECESVPKVVQALNDVKAIHVATGDYTTF 276
             H   +   G V  WG G+   LG          S+      L ++K  ++A+GD+  F
Sbjct: 233 KDHLLALDSKGIVYAWGNGQQYQLGRRILERHRFRSLEPQQFGLYNIK--YIASGDFHCF 290

Query: 277 VVSEDGDVYSFGC---GESASLGHNA-IADGQGNRHANVLT-PQLVTSLKQVNERVVQIS 331
            +    +VY++G    G+ A  G N  + DG      +VLT P ++  L ++  ++ QI+
Sbjct: 291 AIDHADNVYAWGLNQYGQCALTGANGELEDG------SVLTKPTIIEELSKL--KIKQIA 342

Query: 332 LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
                    HT ALT+ G +Y++G  D  ++GI
Sbjct: 343 AGEH-----HTLALTDDGHVYSWGRLDMKEIGI 370



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 98/273 (35%), Gaps = 72/273 (26%)

Query: 173 PSGMAVYSVG--CGLGGKLGHGSRTDE-KHPRL---IEQFQLLNLQPVVVAAGAWHAAVV 226
           P  + V+  G  C LG  LG  S+  E K PRL   + + +L   + V  A G  H   +
Sbjct: 52  PLDIFVWGTGSMCELG--LGPDSKNKEVKRPRLNPFLTEEKLNGTKIVDFAVGGMHTLAL 109

Query: 227 GQDGRVCTWGWGRYGCLGHGNE-----------------------ECESVPKVVQAL-ND 262
               RV +WG    G LG                           E ES P +V+ L  D
Sbjct: 110 DGKNRVWSWGGNDSGVLGRDTSQAKEVLKDMDADASDDDEDGDLNEAESTPGLVENLPKD 169

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESAS--LG------------------HNAIAD 302
              + +A  D  + V+ ++GDVY++GC       LG                   N +  
Sbjct: 170 SSIVQLAATDNLSAVLLDNGDVYAWGCFRCNEGLLGFLRDEIKIQKTPLKIKELKNIVQL 229

Query: 303 GQGNRHANVLTPQLVT------SLKQVNERVV-----------QISLTNSIYW---NAHT 342
             G  H   L  + +          Q+  R++           Q  L N  Y    + H 
Sbjct: 230 AAGKDHLLALDSKGIVYAWGNGQQYQLGRRILERHRFRSLEPQQFGLYNIKYIASGDFHC 289

Query: 343 FALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
           FA+  +  +YA+G    GQ  +   N + E G+
Sbjct: 290 FAIDHADNVYAWGLNQYGQCALTGANGELEDGS 322



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGK----------DSFGEAEYGVQGTK 87
           P     L  ++I Q AAG   T+ ++D G VY++G+          D   E+ +  Q  K
Sbjct: 327 PTIIEELSKLKIKQIAAGEHHTLALTDDGHVYSWGRLDMKEIGIPTDKLPESTFKDQHGK 386

Query: 88  --LVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 143
              V +P  +E  + K+I +    +G+  +  ++ +G VY + +     +G     +DVE
Sbjct: 387 PRSVPTPTKIEFNAKKDILIKTIGVGSHHSFAVTDDGFVYAWGFAETYGVGLGPSIDDVE 446



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 42/254 (16%)

Query: 33  EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-- 90
           ++  TPL  + L+   I+Q AAG    + +   G VYA+G       +Y + G +++   
Sbjct: 212 KIQKTPLKIKELK--NIVQLAAGKDHLLALDSKGIVYAWGNGQ----QYQL-GRRILERH 264

Query: 91  -----SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPND- 141
                 PQ    L NI  +  A G+F    +     VY +    +G  A  G + E  D 
Sbjct: 265 RFRSLEPQQF-GLYNIKYI--ASGDFHCFAIDHADNVYAWGLNQYGQCALTGANGELEDG 321

Query: 142 -VEPHP-LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--------- 190
            V   P ++  L  + + QIAAG  + LAL        VYS G     ++G         
Sbjct: 322 SVLTKPTIIEELSKLKIKQIAAGEHHTLALT---DDGHVYSWGRLDMKEIGIPTDKLPES 378

Query: 191 -----HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR-YGC-L 243
                HG       P  IE     ++    +  G+ H+  V  DG V  WG+   YG  L
Sbjct: 379 TFKDQHGKPRSVPTPTKIEFNAKKDILIKTIGVGSHHSFAVTDDGFVYAWGFAETYGVGL 438

Query: 244 GHGNEECESVPKVV 257
           G   ++ E   ++V
Sbjct: 439 GPSIDDVEVPTRIV 452


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    +L G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 89  PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q   V
Sbjct: 208 VNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQ--RV 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSA--- 319

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   ++ G VY +G C G+S  L H
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVVLPH 346



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  + +L+ +  + V           AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRIAALQGIRIQRVACGY-------AHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIRI + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE  K+  V  AA  +  T+    +G  + + WG
Sbjct: 294 KSNQSYPAPVVVE--KDRIVEIAACHSAHTSAAKTQGG-HVYMWG 335


>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1595

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 12/203 (5%)

Query: 36   GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
            G P   R+L+G R++  A G    + I+  G+VY+ G    G    G    +LV  P+ +
Sbjct: 1402 GIPHTIRALKGKRVVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLV-EPKQI 1460

Query: 96   ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPLLGTLE 152
             +L+    V+AA G  F+ VL+R+G VY+F   +  +LG H +P D+    P P +  L 
Sbjct: 1461 LALQKEHAVRAAAGENFSMVLTRDGVVYSFGAADKGQLG-HPDPQDMPTGYPCP-IDALA 1518

Query: 153  NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
             I + +IAAG+ + +A++       VY  G    G+LG  +  DE+   L+ +     L 
Sbjct: 1519 KIKITKIAAGHQHAMAIS---EYGEVYLWGANDAGQLGFETEDDEQ---LVPRHLPFGLP 1572

Query: 213  PVVVAAGAWHAAVVGQDGRVCTW 235
             V  A G  H  ++ Q GRV  W
Sbjct: 1573 VVDAAGGKSHTVIIDQAGRVYAW 1595



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 45/323 (13%)

Query: 49   IIQAAAGAGRTMLISDAGQVYAFG-----KDSFGEAEYGVQGTKLVTS---PQLVESLKN 100
            ++  A  +   + + ++G VY         +S   A+   +G   +T    PQL +  + 
Sbjct: 1301 VVDVACSSTHALFLVESGDVYTVADKLVESNSIPVAQPHRKGDGALTPHQVPQLQKKGRR 1360

Query: 101  IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE----PHPLLGTLENIPV 156
            +  V  A G  F   LSR G+VY   WG+ +     T+ N       PH +   L+   V
Sbjct: 1361 VIKVGCASG--FNVALSRSGKVY--GWGSSSLFPLRTKDNRTATPGIPHTIRA-LKGKRV 1415

Query: 157  VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP--- 213
            V +A G  ++L +  Q     VYS+G G+ G LG G+  D+    L+E  Q+L LQ    
Sbjct: 1416 VDVACGEHHVLFITGQGE---VYSLGTGVLGALGQGTTVDQ----LVEPKQILALQKEHA 1468

Query: 214  VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATG 271
            V  AAG   + V+ +DG V ++G    G LGH + +      P  + AL  +K   +A G
Sbjct: 1469 VRAAAGENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAG 1528

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
                  +SE G+VY +G  ++  LG     D Q       L P+ +            + 
Sbjct: 1529 HQHAMAISEYGEVYLWGANDAGQLGFETEDDEQ-------LVPRHLP---------FGLP 1572

Query: 332  LTNSIYWNAHTFALTESGKLYAF 354
            + ++    +HT  + ++G++YA+
Sbjct: 1573 VVDAAGGKSHTVIIDQAGRVYAW 1595



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 14/257 (5%)

Query: 37   TPLYCRSLQ--GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQL 94
            TP     LQ  G R+I+    +G  + +S +G+VY +G  S          T     P  
Sbjct: 1347 TPHQVPQLQKKGRRVIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGIPHT 1406

Query: 95   VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND-VEPHPLLGTLEN 153
            + +LK   VV  A G      ++ +G VY+   G    LG  T  +  VEP  +L  L+ 
Sbjct: 1407 IRALKGKRVVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILA-LQK 1465

Query: 154  IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPRLIEQFQLLNL 211
               V+ AAG  + + L        VYS G    G+LGH    D    +P  I+   L  +
Sbjct: 1466 EHAVRAAAGENFSMVLT---RDGVVYSFGAADKGQLGHPDPQDMPTGYPCPID--ALAKI 1520

Query: 212  QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVAT 270
            +   +AAG  HA  + + G V  WG    G LG   E+ E  VP+ +     +  +  A 
Sbjct: 1521 KITKIAAGHQHAMAISEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPF--GLPVVDAAG 1578

Query: 271  GDYTTFVVSEDGDVYSF 287
            G   T ++ + G VY++
Sbjct: 1579 GKSHTVIIDQAGRVYAW 1595



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 33/219 (15%)

Query: 172  QPSGMAVYSVGCGLG--------GKL-GHGS------RTDEKH---PRLIEQFQLLNLQP 213
            Q  G  V  VGC  G        GK+ G GS      RT +     P +    + L  + 
Sbjct: 1355 QKKGRRVIKVGCASGFNVALSRSGKVYGWGSSSLFPLRTKDNRTATPGIPHTIRALKGKR 1414

Query: 214  VV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATG 271
            VV VA G  H   +   G V + G G  G LG G    + V PK + AL    A+  A G
Sbjct: 1415 VVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILALQKEHAVRAAAG 1474

Query: 272  DYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQIS 331
            +  + V++ DG VYSFG  +   LGH    D             + T      + + +I 
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQD-------------MPTGYPCPIDALAKIK 1521

Query: 332  LTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
            +T     + H  A++E G++Y +GA D GQLG E  +++
Sbjct: 1522 ITKIAAGHQHAMAISEYGEVYLWGANDAGQLGFETEDDE 1560


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 35/321 (10%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           ++ A G   T LI++ G+++ FG +++G+   G + T  V  P  V++LK+  V   A G
Sbjct: 39  LRIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVT--VNKPTCVKALKSEKVQLVACG 96

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI----PVVQIAAGYCY 165
              T + + +G+VY     ++ +LG      D E       L+      P+  +AAG   
Sbjct: 97  RNHTLICTAKGKVYASGGNSEGQLGL----GDCEERTSFKRLDFFDSQGPIKMLAAGSNT 152

Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
             AL    SG  ++  G    G++G G  +    P+ +   Q ++     V+ G +H+A+
Sbjct: 153 SAALTV--SG-KLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISW----VSCGYYHSAL 205

Query: 226 VGQDGRVCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
           V  DG + T+G    G LG G  +     VP++V+++ +     VA G   T  ++E G+
Sbjct: 206 VTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKE-PVRQVACGGGHTVALAE-GN 263

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           VY+FG G+   LGH       G        P+LV   K+   R  Q+     +    HT 
Sbjct: 264 VYTFGLGQFGQLGH-------GTFIFESRVPRLVEHFKK--GRACQV-----VCGENHTA 309

Query: 344 ALTESGKLYAFGAGDKGQLGI 364
            +TE G LY FG G  G+LG+
Sbjct: 310 VITEDGLLYTFGDGRHGKLGL 330



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 136/274 (49%), Gaps = 21/274 (7%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG +V    P   ++L+  ++   A G   T++ +  G+VYA G +S  E + G+   + 
Sbjct: 70  LGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNS--EGQLGLGDCEE 127

Query: 89  VTSPQLVESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            TS + ++   +   ++  A G+  +A L+  G+++ +    + ++G   E     P  +
Sbjct: 128 RTSFKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEV 187

Query: 148 -LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH--PRLIE 204
            +G     P+  ++ GY Y  AL       A+Y+ G    GKLG G+     H  P+L++
Sbjct: 188 SVGQ----PISWVSCGY-YHSALVT--VDGALYTFGERDSGKLGLGTHQLPGHRVPQLVK 240

Query: 205 QFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVVQALND 262
             +    +PV  VA G  H   + + G V T+G G++G LGHG    ES VP++V+    
Sbjct: 241 SIK----EPVRQVACGGGHTVALAE-GNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKK 295

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            +A  V  G+  T V++EDG +Y+FG G    LG
Sbjct: 296 GRACQVVCGENHTAVITEDGLLYTFGDGRHGKLG 329



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 15/203 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I   AAG+  +  ++ +G+++ +G ++  E + G+     V+SPQ V   + I  V  + 
Sbjct: 143 IKMLAAGSNTSAALTVSGKLFMWGDNT--EGQIGLGKESQVSSPQEVSVGQPISWV--SC 198

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           G + +A+++ +G +YTF   +  +LG   H  P    P  L+ +++  PV Q+A G  + 
Sbjct: 199 GYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQ-LVKSIKE-PVRQVACGGGHT 256

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHAAV 225
           +ALA       VY+ G G  G+LGHG+   E   PRL+E F+    +   V  G  H AV
Sbjct: 257 VALA----EGNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFK--KGRACQVVCGENHTAV 310

Query: 226 VGQDGRVCTWGWGRYGCLGHGNE 248
           + +DG + T+G GR+G LG G E
Sbjct: 311 ITEDGLLYTFGDGRHGKLGLGEE 333



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 44/307 (14%)

Query: 62  ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---LKNIFVVQAAIGNFFTAVLSR 118
           I ++G V+ FGK  F +                + S   LKN   ++ A G+  TA+++ 
Sbjct: 9   IPESGAVFTFGKSKFADN---------------IPSKFWLKNDIPLRIACGDEHTALITE 53

Query: 119 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAV 178
            G+++ F   N  +LG  ++    +P   +  L++  V  +A G  +   L C   G  V
Sbjct: 54  NGKLFMFGSNNWGQLGLGSKVTVNKPT-CVKALKSEKVQLVACGRNH--TLICTAKG-KV 109

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ-PV-VVAAGAWHAAVVGQDGRVCTWG 236
           Y+ G    G+LG G   D +     ++    + Q P+ ++AAG+  +A +   G++  WG
Sbjct: 110 YASGGNSEGQLGLG---DCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWG 166

Query: 237 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
               G +G G E   S P+ V     +    V+ G Y + +V+ DG +Y+FG  +S  LG
Sbjct: 167 DNTEGQIGLGKESQVSSPQEVSVGQPIS--WVSCGYYHSALVTVDGALYTFGERDSGKLG 224

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
              +   Q   H     PQLV S+K   E V Q++         HT AL E G +Y FG 
Sbjct: 225 ---LGTHQLPGHR---VPQLVKSIK---EPVRQVAC-----GGGHTVALAE-GNVYTFGL 269

Query: 357 GDKGQLG 363
           G  GQLG
Sbjct: 270 GQFGQLG 276


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 208 MNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 319

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S  L H+       +  A   TP +   L  V
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSV 372



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G 
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHT 137
           +  +   +P +VE    I  + A      +A  ++ G VY +    G    L HHT
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHT 348


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     L+    +  
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPC-HIST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 124 NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q V  
Sbjct: 184 VNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRV-- 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H+A   
Sbjct: 239 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLA--- 295

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   ++ G VY +G C G+S  L H
Sbjct: 296 HTSAAKTQGGHVYMWGQCRGQSVILPH 322



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  +++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 223 TPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE 282

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
             + I +    + +  +A  ++ G VY   WG
Sbjct: 283 KDRIIEIAACHLAH-TSAAKTQGGHVYM--WG 311


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 65  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           + IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 184 MNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G++  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 239 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 295

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S  L H+       +  A   TP +   L  V
Sbjct: 296 HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSV 348



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V +L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 259

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQ+YA+G +S+G+   G 
Sbjct: 210 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 269

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHT 137
           +  +   +P +VE    I  + A      +A  ++ G VY +    G    L HHT
Sbjct: 270 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHT 324


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 152/332 (45%), Gaps = 34/332 (10%)

Query: 53  AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
           A G   ++ I+ +G VY  GK+     + G  G +   +   V  L+ I  V  A+G  F
Sbjct: 41  ATGYYHSLAITRSGTVYTTGKND--RRQLGRSGDEHKWA--RVTPLETITAVAGAVGLDF 96

Query: 113 TAVLSREGRVYTFSWGNDARLG---HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLAL 169
           + V+   G+VYT+  G   +LG      E     P P+ G L N  V+ +A G  + LAL
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKG-LGNAFVISVACGTRHCLAL 155

Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
                   V+S G G  G+LG G       P +I   +   +  V VAAG+ ++  V   
Sbjct: 156 T---RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKGV--VSVAAGSTYSLAVTGA 210

Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
            +V  +G    G LG G+      P +V+ L+  +  HV  GD+ T   +  G +Y++G 
Sbjct: 211 DQVYAFGSNSKGQLGVGDTTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGS 270

Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL---- 345
            +   LG  + AD       +V  P  +T + ++  RV+++S         HT AL    
Sbjct: 271 NQWGQLGLGSEAD-------SVAAPTEITHILEIG-RVLEVSAGRR-----HTVALIRTV 317

Query: 346 TESGK----LYAFGAGDKGQLGIELVNNQTER 373
           TE+G       AFGA + GQLG++  +  ++R
Sbjct: 318 TETGAQATVAVAFGANNTGQLGLDPDHPASKR 349



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 126/294 (42%), Gaps = 28/294 (9%)

Query: 72  GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 131
           G+   G+A+ G   T++   P L + L  +     A G + +  ++R G VYT    +  
Sbjct: 12  GQLGIGDAD-GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSGTVYTTGKNDRR 65

Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
           +LG      D      +  LE I  V  A G  +  ++    +G  VY+ G G  G+LG 
Sbjct: 66  QLGRS---GDEHKWARVTPLETITAVAGAVGLDF--SVVVDSTG-KVYTWGGGERGQLGL 119

Query: 192 GSRTDEKHPRLIEQFQLL-NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           G    E   R+    + L N   + VA G  H   + +DGRV +WG G  G LG G    
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQFVS 179

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
              P+V+  L     + VA G   +  V+    VY+FG      LG   + D        
Sbjct: 180 RHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLG---VGDTTAR---- 232

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
              P LV  L    ++V  ++       + HT A T +G LYA+G+   GQLG+
Sbjct: 233 -FRPTLVRFLD--GKQVCHVTAG-----DFHTLARTRTGHLYAWGSNQWGQLGL 278



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           +P     L+G  ++  AAG+  ++ ++ A QVYAFG +S G  + GV  T     P LV 
Sbjct: 182 SPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKG--QLGVGDTTARFRPTLVR 239

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDV-EPHPLLGTLEN 153
            L    V     G+F T   +R G +Y  +WG++   +LG  +E + V  P  +   LE 
Sbjct: 240 FLDGKQVCHVTAGDFHTLARTRTGHLY--AWGSNQWGQLGLGSEADSVAAPTEITHILEI 297

Query: 154 IPVVQIAAGYCYLLAL---ACQPSGMAVYSVGCGLG--GKLG------HGSRTDEKHPRL 202
             V++++AG  + +AL     +    A  +V  G    G+LG         RT   HP  
Sbjct: 298 GRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLDPDHPASKRTQLFHPVR 357

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVV 226
           +++    ++ P+ + AG  H  ++
Sbjct: 358 LKRIS--SMHPIKLIAGGNHTIMI 379


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 16/268 (5%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 102
           SL+G R+   A G G T+ + ++G++YA+G  S G    G    +   +     S+  + 
Sbjct: 260 SLKG-RVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVR 318

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPN----DVEPHPLLGTLENIPVV 157
                 G   +  LS +GR Y +   N  + GH HT       ++E        E    V
Sbjct: 319 FRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFV 378

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGK--------LGHGSRTDEKHPRLIEQFQLL 209
             AAG  +   L C  SG  VYS GCG            LGHG       P  ++     
Sbjct: 379 VYAAGG-WEHTLFCTASGR-VYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDT 436

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
           + + V VA G  H+  V  +GRV TWG G  G LGHG+EE   +P +V+ ++  K     
Sbjct: 437 HEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAK 496

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGH 297
            G   T  ++ D ++++ G G+S  LGH
Sbjct: 497 AGCEHTVFLTYDHELWTCGQGDSGRLGH 524



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 143/343 (41%), Gaps = 53/343 (15%)

Query: 65  AGQVYAFGKDSFGEAEYG-----------VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 113
            G + +FGK   G+  +G               K+V  P ++ + +++   +    +  +
Sbjct: 165 CGYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMV--PTMIAATRDVLFRKIDSLSTHS 222

Query: 114 AVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
             ++ +G    +  G+  RLGH +   +  P  +        V  +A G  + LAL    
Sbjct: 223 IAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALI--E 280

Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
           SG  +Y+ G G  G+LG G   D   P       +  ++   +  GA H+  +  DGR  
Sbjct: 281 SG-ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAY 339

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQALNDVK-------AIHVATGDYTTFVVSEDGDVYS 286
            WG    G  GHG+   +   + +++  D +        ++ A G   T   +  G VYS
Sbjct: 340 AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYS 399

Query: 287 FGCGESAS--------LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
            GCG   S        LGH     G  +R    L P  V +L   +E VV+++      W
Sbjct: 400 CGCGYKDSRRAGIPPVLGH-----GDCDRR---LKPTSVQALDDTHEEVVKVACG----W 447

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
           + H+ A+T +G++Y +G+G  G+LG          G+ E  DI
Sbjct: 448 D-HSLAVTANGRVYTWGSGANGKLG---------HGDEESFDI 480



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 143/343 (41%), Gaps = 46/343 (13%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVL 116
           ++ I+  G+  A+G        +G    +   +P+ +E  SLK   V   A G   T  L
Sbjct: 222 SIAITAKGEAMAWGNGDKYRLGHGSSSKEY--TPRTIEFLSLKGR-VRDLACGLGHTLAL 278

Query: 117 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIAAGYCYLLALACQPSG 175
              G +Y +  G++ RLG     +   P    G ++  +    I  G  + L L+    G
Sbjct: 279 IESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWD--G 336

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ----LLNLQPVVVAAGAW-HAAVVGQDG 230
            A Y+ G    G+ GHG   D+   + IE F+        + VV AAG W H       G
Sbjct: 337 RA-YAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASG 395

Query: 231 RVCTWGWG-----RYG---CLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSE 280
           RV + G G     R G    LGHG+ +    P  VQAL+D   + + VA G   +  V+ 
Sbjct: 396 RVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTA 455

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSL--KQVNERVVQISLTNSIYW 338
           +G VY++G G +  LGH            +   P LV  +  K+V +             
Sbjct: 456 NGRVYTWGSGANGKLGHGD--------EESFDIPTLVRCMDGKKVKDAKAGCE------- 500

Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
             HT  LT   +L+  G GD G+LG     +   R  P ++++
Sbjct: 501 --HTVFLTYDHELWTCGQGDSGRLG---HGDSQTRKRPTKIEL 538



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 32/213 (15%)

Query: 172 QPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLLNLQPVVVAAG---------- 219
           QP G  + S G G  GKLGHG  S    +     E      + P ++AA           
Sbjct: 163 QPCGY-LMSFGKGDHGKLGHGQCSHVSCQEGNCTEN----KMVPTMIAATRDVLFRKIDS 217

Query: 220 -AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN-DVKAIHVATGDYTTFV 277
            + H+  +   G    WG G    LGHG+   E  P+ ++ L+   +   +A G   T  
Sbjct: 218 LSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLA 277

Query: 278 VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIY 337
           + E G++Y++G G +  LG     D      +N                +  +   +   
Sbjct: 278 LIESGELYAWGNGSNGRLGLGDTNDRSSPTRSN-------------GASIAPVRFRHIFC 324

Query: 338 WNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
             +H+  L+  G+ YA+G  ++GQ G    N+Q
Sbjct: 325 GASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQ 357



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 12/166 (7%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFG---KDSFGEAEYGVQG---TKLVTSPQLVESLKNIF 102
           ++ AA G   T+  + +G+VY+ G   KDS       V G         P  V++L +  
Sbjct: 378 VVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTH 437

Query: 103 --VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIA 160
             VV+ A G   +  ++  GRVYT+  G + +LGH  E +   P  L+  ++   V    
Sbjct: 438 EEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIP-TLVRCMDGKKVKDAK 496

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
           AG  + + L        +++ G G  G+LGHG     K P  IE F
Sbjct: 497 AGCEHTVFLTYD---HELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 16/267 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P    SL G +I   + G+G   +L +  G+V+ +G +++ +   G     L+    +  
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPC-HIST 147

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V + A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 148 NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  I   Q + +Q V  
Sbjct: 208 VNIACGQ--MCSMAVVNTG-EVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRV-- 262

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H+A   
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLA--- 319

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
           +T+   ++ G VY +G C G+S  L H
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVILPH 346



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q   VA G++H+ V+  DG V  WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLMPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V   G+VY +G   +  LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  +++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRISALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 283

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G +  +   +P +VE
Sbjct: 247 TPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE 306

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
             + I +    + +  +A  ++ G VY   WG
Sbjct: 307 KDRIIEIAACHLAH-TSAAKTQGGHVYM--WG 335


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 16/269 (5%)

Query: 30  LGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
           LGR   + +G P   ++L+   I+  + G   ++ I   G+V+++G  S G  + G++  
Sbjct: 69  LGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG--QLGIREF 126

Query: 87  KLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEP 144
           K ++S P+ ++ L +  ++Q + G++ +  L+++GRV+++   N  +LG     P+   P
Sbjct: 127 KKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASP 186

Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--EKHPRL 202
              + +L+ IP+ Q+AAG  +  AL+   SG + Y  G    G+L    + +  E+  + 
Sbjct: 187 Q-WVKSLDGIPLAQVAAGGAHSFALSF--SGTS-YGWGRNNAGQLALSGKKESAEQISKP 242

Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
               +L  LQ   ++ G  H AV+ QDG+V T+G    G LG         P+VV +   
Sbjct: 243 FSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGPQVVDSA-- 300

Query: 263 VKAIHVATGDYTTFVVS-EDGDVYSFGCG 290
           V    +A G Y T   S   G V SFGCG
Sbjct: 301 VSFSQIACGSYHTLAYSCTTGQVISFGCG 329



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 33/281 (11%)

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA-------RLGHHTEPNDVEPHPLLG 149
           SL N  ++QAA G   + +L  +G V+  S GN++       R   H  P  ++      
Sbjct: 33  SLGNQTLLQAACGERHSLLLLSDGTVW--SCGNNSCGQLGRKRCQKHGRPAQIQ------ 84

Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQL 208
            LE   +V ++ G  + LA+ C+     V+S G G  G+LG    +     P+ I++  L
Sbjct: 85  ALETQDIVSVSCGKEHSLAI-CKEG--RVFSWGSGSDGQLGIREFKKLSSIPKKIDE--L 139

Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIH 267
            + + + V+ G +H+  + QDGRV +WG   +G LG G N   ++ P+ V++L+ +    
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQ 199

Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
           VA G   +F +S  G  Y +G   +  L       G+      +  P  +  LK++  +V
Sbjct: 200 VAAGGAHSFALSFSGTSYGWGRNNAGQLA----LSGKKESAEQISKPFSIGELKRL--QV 253

Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
             IS  +      HT  LT+ GK++ FG+ D GQLG +L++
Sbjct: 254 TYISCGDE-----HTAVLTQDGKVFTFGSNDSGQLGRQLIS 289



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 37/330 (11%)

Query: 41  CR---SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           CR   SL    ++QAA G   ++L+   G V++ G +S G+   G +  +    P  +++
Sbjct: 28  CRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQ--LGRKRCQKHGRPAQIQA 85

Query: 98  LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
           L+   +V  + G   +  + +EGRV+++  G+D +LG             +  L +  ++
Sbjct: 86  LETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKII 145

Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVV 216
           Q++ G+ + +ALA       V+S G    G+LG G     +  P+ ++    + L    V
Sbjct: 146 QVSCGHYHSIALA---QDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPL--AQV 200

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGC----LGHGNEECESV--PKVVQALNDVKAIHVAT 270
           AAG  H+  +   G   ++GWGR       L    E  E +  P  +  L  ++  +++ 
Sbjct: 201 AAGGAHSFALSFSGT--SYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISC 258

Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
           GD  T V+++DG V++FG  +S  LG   I+  +G        PQ+V S          +
Sbjct: 259 GDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKG--------PQVVDS---------AV 301

Query: 331 SLTNSIYWNAHTFALT-ESGKLYAFGAGDK 359
           S +     + HT A +  +G++ +FG G +
Sbjct: 302 SFSQIACGSYHTLAYSCTTGQVISFGCGSQ 331


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 20/283 (7%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLV 95
           P    +L  I + Q + G   T+ ++D G VY+FG D +G    G QG       SP LV
Sbjct: 69  PKRVEALDKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLV 128

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENI 154
               N  V+Q + G+     L++EG VYT+  G   RLG  TE +   P  +       I
Sbjct: 129 SFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGI 188

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-----HGSRTDEKHPRLIEQFQLL 209
             V       ++L      +   + S G     KLG      G R+ +    +   +   
Sbjct: 189 RSVHAGPDGSFILR-----TNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFT 243

Query: 210 NLQP------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALND 262
            ++P      V V+ G  H+AV+   G + T+G  +YG LG G+ +E ++V  V  +L  
Sbjct: 244 TVKPLSKYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVG 303

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
                VA GD +T + + D  +YS G  E+  LG  A   G+G
Sbjct: 304 KNVTKVACGDRSTVIATSDNLIYSCGFSENGRLGFAAGETGKG 346



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 141/306 (46%), Gaps = 44/306 (14%)

Query: 81  YGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-------AR 132
           Y   G KL  +PQ +E   K    +Q + G+   AV++ E  +YT  W N         +
Sbjct: 2   YSWGGGKL--TPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYT--WANAQGLTSMAGQ 57

Query: 133 LGH-----HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
           LGH     +  P  VE       L+ I V Q++ G  + +   C     AVYS G    G
Sbjct: 58  LGHGDTASYKAPKRVE------ALDKIAVNQVSCGEDFTV---CVTDDGAVYSFGSDYYG 108

Query: 188 KLGHGSRTDEK----HPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 243
            LG+G + D +     P L+  F  +N   + V+ G  H   + ++G V TWG G +G L
Sbjct: 109 CLGNGDQGDGEDCACSPSLVSFF--VNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRL 166

Query: 244 GHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           G G E+  S P+ V  +  + ++++H   G   +F++  +G + S G  E   LG N+ A
Sbjct: 167 GIGTEDDHSSPQKVATRGRHGIRSVHA--GPDGSFILRTNGRLQSCGSNEHNKLGLNSCA 224

Query: 302 DGQGNRHANVLTP--QLVTSLKQVNE-RVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
            G  ++  +   P     T++K +++  +V +S   +     H+  +   G L  FG+  
Sbjct: 225 KGLRSKQVSYDIPCNYNFTTVKPLSKYNIVAVSPGQT-----HSAVIDGFGHLITFGSNK 279

Query: 359 KGQLGI 364
            GQLG+
Sbjct: 280 YGQLGV 285



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 31/290 (10%)

Query: 91  SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN--DVEPHP-L 147
           +P+ VE+L  I V Q + G  FT  ++ +G VY+F       LG+  + +  D    P L
Sbjct: 68  APKRVEALDKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSL 127

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           +    N PV+Q++ G  +++AL  +     VY+ G G  G+LG G+  D   P+ +    
Sbjct: 128 VSFFVNRPVLQVSCGDAHVIALTKEGE---VYTWGSGEFGRLGIGTEDDHSSPQKVATRG 184

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--------HGNEECESVP----- 254
              ++   V AG   + ++  +GR+ + G   +  LG           +    +P     
Sbjct: 185 RHGIRS--VHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNF 242

Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
             V+ L+    + V+ G   + V+   G + +FG  +   LG   + D +  +   ++T 
Sbjct: 243 TTVKPLSKYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLG---VGDFKERKTVTMVTG 299

Query: 315 QLV---TSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
            LV    +     +R   I+ ++++ ++      +E+G+L  F AG+ G+
Sbjct: 300 SLVGKNVTKVACGDRSTVIATSDNLIYSC---GFSENGRL-GFAAGETGK 345


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 29/259 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ  RI     G    +L++D G+V    + +             V  P  ++ L N  V
Sbjct: 74  LQNERIRSIVCGEAGAVLLADDGKVLVMDQST-------------VCRP--LKGLDNRQV 118

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
           +Q A G+  +  LS +G +  F WG +A  +LG   E    +    L +L  IPV QI+A
Sbjct: 119 IQIACGDQHSMALSNDGLL--FVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 176

Query: 162 G--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
           G  + ++L+L    SG+ V+  G    G+LG G  TD   P +++   L   + V ++ G
Sbjct: 177 GGNHSFVLSL----SGV-VFGWGSNSAGQLGLGDTTDRFIPTIVK--SLSGKKTVSISCG 229

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
             H A + + G V T+G G +G LGH + + E  P++V  L   K   V  G + T V  
Sbjct: 230 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFE 289

Query: 280 EDGD-VYSFGCGESASLGH 297
           +  + +YSFGCG    LG+
Sbjct: 290 DSSNRIYSFGCGMQGQLGN 308



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 17/221 (7%)

Query: 41  CRSLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVE 96
           CR L+G+   ++IQ A G   +M +S+ G ++ +G+++ G+   G++  +  T SPQ ++
Sbjct: 107 CRPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQ--LGLRKEQAGTQSPQHLQ 164

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           SL  I V Q + G   + VLS  G V  F WG+++  +LG     +   P  ++ +L   
Sbjct: 165 SLCEIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFIP-TIVKSLSGK 221

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
             V I+ G  +   L+    G  V++ G G  G+LGH S  DE HPRL+ +  L   +  
Sbjct: 222 KTVSISCGGEHTATLS---KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE--LWGSKVS 276

Query: 215 VVAAGAWHAAVV-GQDGRVCTWGWGRYGCLGHGNEECESVP 254
            V  G  H  V      R+ ++G G  G LG+G +  +SVP
Sbjct: 277 QVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 7/173 (4%)

Query: 30  LGREVNGT--PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
           L +E  GT  P + +SL  I + Q +AG   + ++S +G V+ +G +S G+   G    +
Sbjct: 150 LRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR 209

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
            +  P +V+SL     V  + G   TA LS+ G V+TF  G   +LGH++  ++  P  L
Sbjct: 210 FI--PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPR-L 266

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           +  L    V Q+  G  + L    + S   +YS GCG+ G+LG+G +  +  P
Sbjct: 267 VAELWGSKVSQVTCGRHHTLVF--EDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
           PL G L+N  V+QIA G  + +AL+   +   ++  G    G+LG   R ++   +  + 
Sbjct: 109 PLKG-LDNRQVIQIACGDQHSMALS---NDGLLFVWGENALGQLG--LRKEQAGTQSPQH 162

Query: 206 FQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
            Q L   PV  ++AG  H+ V+   G V  WG    G LG G+     +P +V++L+  K
Sbjct: 163 LQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK 222

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
            + ++ G   T  +S+ G V++FG G    LGHN++ D           P+LV  L    
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHH--------PRLVAEL--WG 272

Query: 325 ERVVQISLTNSIYWNAHTFALTESG-KLYAFGAGDKGQLG 363
            +V Q++         HT    +S  ++Y+FG G +GQLG
Sbjct: 273 SKVSQVTCGRH-----HTLVFEDSSNRIYSFGCGMQGQLG 307



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 36/187 (19%)

Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
           H    DEK    +E  QL N +   +  G   A ++  DG+V                + 
Sbjct: 61  HNEDADEK----LEPLQLQNERIRSIVCGEAGAVLLADDGKVLVM-------------DQ 103

Query: 251 ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHA 309
            +V + ++ L++ + I +A GD  +  +S DG ++ +G         NA+   G     A
Sbjct: 104 STVCRPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWG--------ENALGQLGLRKEQA 155

Query: 310 NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
              +PQ + SL ++   V QIS   +     H+F L+ SG ++ +G+   GQLG+    +
Sbjct: 156 GTQSPQHLQSLCEIP--VAQISAGGN-----HSFVLSLSGVVFGWGSNSAGQLGL---GD 205

Query: 370 QTERGNP 376
            T+R  P
Sbjct: 206 TTDRFIP 212



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 5/141 (3%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
           P   +SL G + +  + G   T  +S  G V+ FG   FG+   G    K    P+LV  
Sbjct: 212 PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ--LGHNSLKDEHHPRLVAE 269

Query: 98  LKNIFVVQAAIGNFFTAVL-SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE--NI 154
           L    V Q   G   T V      R+Y+F  G   +LG+  +     P P+L   E    
Sbjct: 270 LWGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEF 329

Query: 155 PVVQIAAGYCYLLALACQPSG 175
            + ++ AG  +  AL  +  G
Sbjct: 330 TMEKLIAGEHHSFALFFKNPG 350


>gi|13436272|gb|AAH04933.1| RCC2 protein, partial [Homo sapiens]
          Length = 351

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 30/244 (12%)

Query: 69  YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +++G++  G+  +G   TK V +P+L+E L +  +V AA G   T  L+  G V+ F   
Sbjct: 1   WSWGRNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 58

Query: 129 NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGK 188
              +LG   +  D  P P        P+ ++A G  + + + C+ +   +YS GC   G+
Sbjct: 59  KMGQLGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQ 114

Query: 189 LGHGSRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVV 226
           LGH S               E  PR +  F       Q+L +  VVV   A GA H  V+
Sbjct: 115 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 174

Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDV 284
               RV +WG+G YG LGH  ++ E VP++V+  +     A  +  G   +F VSE G +
Sbjct: 175 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGL 234

Query: 285 YSFG 288
           + +G
Sbjct: 235 FFWG 238



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 40/311 (12%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
           I+ AA G   T+ +++ G V+AFG++  G+   G Q   + +  Q++ + + I   + A 
Sbjct: 33  IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPI--TKMAC 90

Query: 109 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPN----------DVEPHPL----------- 147
           G  F+ ++  +G +Y+F      +LGH+++            D E  P            
Sbjct: 91  GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 150

Query: 148 --LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
             +  + N+ V  +A G  + L L  Q     V+S G G  G+LGH  + DE  PRL++ 
Sbjct: 151 GQILPVPNVVVRDVACGANHTLVLDSQKR---VFSWGFGGYGRLGHAEQKDEMVPRLVKL 207

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
           F         + AG   +  V + G +  WG        + + E    PK VQ L   + 
Sbjct: 208 FDFPGRGASQIYAGYTCSFAVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRI 261

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
             +A G  ++ +V+ D    S+  G S + G     D   ++  +    Q V +L  +  
Sbjct: 262 RSLACGK-SSIIVAADESTISW--GPSPTFGELGYGD---HKPKSSTAAQEVKTLDGIFS 315

Query: 326 RVVQISLTNSI 336
             V +  ++S+
Sbjct: 316 EQVAMGYSHSL 326



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 15/196 (7%)

Query: 179 YSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGW 237
           +S G    G+LGHG     + PRLIE    L+ + +V AA G  H   + + G V  +G 
Sbjct: 1   WSWGRNEKGQLGHGDTKRVEAPRLIEG---LSHEVIVSAACGRNHTLALTETGSVFAFGE 57

Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLG 296
            + G LG GN+  ++VP   Q + + + I  +A G   + ++   G++YSFGC E   LG
Sbjct: 58  NKMGQLGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLG 116

Query: 297 HNA----IADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA-----HTFALTE 347
           HN+    IA  Q   +   L P+ V    +  +    + + N +  +      HT  L  
Sbjct: 117 HNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDS 176

Query: 348 SGKLYAFGAGDKGQLG 363
             +++++G G  G+LG
Sbjct: 177 QKRVFSWGFGGYGRLG 192



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 45/282 (15%)

Query: 30  LGREVNGTPLYCRSL-QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
           LG + +  P   + +  G  I + A GA  +M++   G +Y+FG   +G+  +   G K 
Sbjct: 65  LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG-KF 123

Query: 89  VTSPQLVE-----------------------SLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
           +   Q +E                        + N+ V   A G   T VL  + RV+++
Sbjct: 124 IARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSW 183

Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLENIP---VVQIAAGYCYLLALACQPSGMAVYSVG 182
            +G   RLGH  + +++ P   L  L + P     QI AGY       C     AV  VG
Sbjct: 184 GFGGYGRLGHAEQKDEMVPR--LVKLFDFPGRGASQIYAGY------TCS---FAVSEVG 232

Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG-RYG 241
                   + SR    +P+ ++   L   +   +A G   + +V  D    +WG    +G
Sbjct: 233 GLFFWGATNTSRESTMYPKAVQ--DLCGWRIRSLACGK-SSIIVAADESTISWGPSPTFG 289

Query: 242 CLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSED 281
            LG+G+ + +S    + V+ L+ + +  VA G   + V++ D
Sbjct: 290 ELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 331



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 49/260 (18%)

Query: 125 FSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
           +SWG + +  LGH  +   VE   L+  L +  +V  A G  + LAL    S   V++ G
Sbjct: 1   WSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS---VFAFG 56

Query: 183 CGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRY 240
               G+LG G++TD    P  I    + N QP+  +A GA  + ++   G + ++G   Y
Sbjct: 57  ENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEY 112

Query: 241 GCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHVATGDYTTF 276
           G LGH ++            +CE VP+ V              + +V    VA G   T 
Sbjct: 113 GQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTL 172

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
           V+     V+S+G G    LGH    D         + P+LV           QI    + 
Sbjct: 173 VLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGASQIYAGYTC 224

Query: 337 YWNAHTFALTESGKLYAFGA 356
                +FA++E G L+ +GA
Sbjct: 225 -----SFAVSEVGGLFFWGA 239



 Score = 38.1 bits (87), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 18/88 (20%)

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +S+G  E   LGH     G   R   V  P+L+  L   +E +V  +   +     HT A
Sbjct: 1   WSWGRNEKGQLGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLA 45

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTE 372
           LTE+G ++AFG    GQLG+    NQT+
Sbjct: 46  LTETGSVFAFGENKMGQLGL---GNQTD 70


>gi|190344431|gb|EDK36104.2| hypothetical protein PGUG_00202 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 437

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 167/381 (43%), Gaps = 72/381 (18%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV------------------- 89
           I+  AAG   T+++  AG V+++G +  G       G +++                   
Sbjct: 34  IVDFAAGGMHTLVLDSAGNVWSWGGNDGGVLGRDTSGAEVLKDLDNASDSDDEDGDLNVA 93

Query: 90  -TSPQLVESLKNIF---VVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPND 141
            ++P  VE L  I    +VQ A  +  +A+L   G VY  +WG    N+  LG   +   
Sbjct: 94  ESTPGKVEGLPPIADAKIVQLAATDNLSALLYSNGDVY--AWGSFRCNEGILGFLRDEIK 151

Query: 142 VEPHPLLGT-LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
           ++  P+  T L+NI  VQ+A G  +LLAL    S   VY+ G G   +LG          
Sbjct: 152 IQRSPMKITGLKNI--VQLAPGKDHLLAL---DSKGIVYAWGNGQQYQLGR--------- 197

Query: 201 RLIEQFQLLNLQP--------VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE- 251
           +++E+ +   L+P          +A+G +H   +  D RV TWG  ++G  G  NE  E 
Sbjct: 198 KILERHRYKTLEPHAMALTNIKYIASGDFHCFAIDHDDRVYTWGLNQFGQCGFTNENGEL 257

Query: 252 ------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-------HN 298
                 S P V++ L+++    +A G++ +  ++  GDVY++G  +   +G        +
Sbjct: 258 EDGSLVSKPTVIEKLSNLNIQEIAAGEHHSMALTASGDVYTWGRYDMKEVGIPQDKLPES 317

Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
              D  G   A  +  +L    K  N     +        + H+F++T+ G +YA+G  D
Sbjct: 318 TFKDAHGKVRAVPVPTKLQVGAKGEN----GVKFKTVGCGSHHSFSVTDDGMVYAWGFAD 373

Query: 359 KGQLGIELVNNQTERGNPERV 379
              LG+  V +  E   P R+
Sbjct: 374 TYALGLGPVESDVEV--PTRI 392



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 116/279 (41%), Gaps = 40/279 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVESLKNIFVVQ 105
           +I+Q AA    + L+   G VYA+G     E   G      K+  SP  +  LKNI  VQ
Sbjct: 110 KIVQLAATDNLSALLYSNGDVYAWGSFRCNEGILGFLRDEIKIQRSPMKITGLKNI--VQ 167

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHT----EPNDVEPHPLLGTLENIPVVQIAA 161
            A G      L  +G VY +  G   +LG           +EPH +   L NI  +    
Sbjct: 168 LAPGKDHLLALDSKGIVYAWGNGQQYQLGRKILERHRYKTLEPHAM--ALTNIKYIASGD 225

Query: 162 GYCYLLALACQPSGMAVYSVG-CGL---GGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
            +C+ +    +     +   G CG     G+L  GS   +  P +IE+   LN+Q   +A
Sbjct: 226 FHCFAIDHDDRVYTWGLNQFGQCGFTNENGELEDGSLVSK--PTVIEKLSNLNIQE--IA 281

Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCL----------------GHGNEECESVPKVVQ--- 258
           AG  H+  +   G V T  WGRY                    HG      VP  +Q   
Sbjct: 282 AGEHHSMALTASGDVYT--WGRYDMKEVGIPQDKLPESTFKDAHGKVRAVPVPTKLQVGA 339

Query: 259 -ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              N VK   V  G + +F V++DG VY++G  ++ +LG
Sbjct: 340 KGENGVKFKTVGCGSHHSFSVTDDGMVYAWGFADTYALG 378



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 50/217 (23%)

Query: 183 CGLGGKLGHGSRTDE-KHPRL---IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
           C LG  LG  + T E K PRL   + + +L N   V  AAG  H  V+   G V +WG  
Sbjct: 2   CELG--LGPAASTKEVKRPRLNPYLTKEKLGNESIVDFAAGGMHTLVLDSAGNVWSWGGN 59

Query: 239 RYGCLGH----------------GNEE------CESVPKVVQAL---NDVKAIHVATGDY 273
             G LG                  ++E       ES P  V+ L    D K + +A  D 
Sbjct: 60  DGGVLGRDTSGAEVLKDLDNASDSDDEDGDLNVAESTPGKVEGLPPIADAKIVQLAATDN 119

Query: 274 TTFVVSEDGDVY---SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
            + ++  +GDVY   SF C E        I     +      +P  +T LK     +VQ+
Sbjct: 120 LSALLYSNGDVYAWGSFRCNE-------GILGFLRDEIKIQRSPMKITGLKN----IVQL 168

Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 367
           +         H  AL   G +YA+G G + QLG +++
Sbjct: 169 APGKD-----HLLALDSKGIVYAWGNGQQYQLGRKIL 200


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 22/312 (7%)

Query: 27  RNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
           R  L RE    P+  ++L+ +R+   + G   ++ +   G+V+A+G  S G+   G +  
Sbjct: 68  RRGLQREEQPKPI--QALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIG-EFK 124

Query: 87  KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVE 143
           ++   PQ +++L  I ++Q + GN+ +  LS +G+V  FSWG+++  +LG   E P+   
Sbjct: 125 EINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQV--FSWGSNSHGQLGLGKELPSQAS 182

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
           P  +  +L+ IP+ Q+AAG  +  AL+   +     S   G     G         PR +
Sbjct: 183 PQRV-RSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSV 241

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
              + L +  V ++ G  H AV+ Q+G+V T+G    G LGH     ++ P++++ +  +
Sbjct: 242 SALKTLGV--VYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL 299

Query: 264 KAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
            +  +  G Y T   V   G V SFG G S     N         H  +LT     +   
Sbjct: 300 VS-QIDCGSYHTLAYVYTTGQVVSFGRGPSCKSCSN---------HPELLTENTDVTCLI 349

Query: 323 VNERVVQISLTN 334
             ER+V + + +
Sbjct: 350 SAERLVDVQVKH 361



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 177 AVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           AV+S G    G+LG      E+ P+ I+  + L ++  +V+ G  H+  V   GRV  WG
Sbjct: 54  AVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVE--LVSCGKEHSLAVCYKGRVFAWG 111

Query: 237 WGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
            G  G LG G  +E   +P+ ++ L  +K I V+ G+Y +  +SEDG V+S+G      L
Sbjct: 112 AGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQL 171

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G        G    +  +PQ V SL         I L       AH+FAL+ SG  + +G
Sbjct: 172 G-------LGKELPSQASPQRVRSLDG-------IPLAQVAAGGAHSFALSLSGTSFGWG 217

Query: 356 AGDKGQLGIELVNNQTERGNPERV 379
           + + GQL     N   +   P  V
Sbjct: 218 SNNAGQLAFFGSNVPVQSYKPRSV 241



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 32/319 (10%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
           G  + QAA+G   ++L+   G V++ G +S G+   G +G +    P+ +++L+ + V  
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVEL 90

Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARL--GHHTEPNDVEPHPLLGTLENIPVVQIAAGY 163
            + G   +  +  +GRV+ +  G++ +L  G   E N +     + TL  I ++Q++ G 
Sbjct: 91  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQK--IKTLTGIKIIQVSCGN 148

Query: 164 CYLLALACQPSGMAVYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWH 222
            + LAL+       V+S G    G+LG G     +  P+ +     + L    VAAG  H
Sbjct: 149 YHSLALS---EDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPL--AQVAAGGAH 203

Query: 223 AAVVGQDGRVCTWGWGRYGCLGH--GNEECESV-PKVVQALNDVKAIHVATGDYTTFVVS 279
           +  +   G    WG    G L     N   +S  P+ V AL  +  ++++ G   T V++
Sbjct: 204 SFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLT 263

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN 339
           ++G V++FG      LGH+  A+  G        PQL+  ++ +   V QI        +
Sbjct: 264 QNGKVFTFGDNSCGQLGHSPTAEKTG--------PQLMEGIEGL---VSQIDCG-----S 307

Query: 340 AHTFA-LTESGKLYAFGAG 357
            HT A +  +G++ +FG G
Sbjct: 308 YHTLAYVYTTGQVVSFGRG 326



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 22/260 (8%)

Query: 32  REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
           +E+N  P   ++L GI+IIQ + G   ++ +S+ GQV+++G +S G+   G +      S
Sbjct: 124 KEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPS-QAS 182

Query: 92  PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-----ARLGHHTEPNDVEPHP 146
           PQ V SL  I + Q A G   +  LS  G   +F WG++     A  G +      +P  
Sbjct: 183 PQRVRSLDGIPLAQVAAGGAHSFALSLSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRS 240

Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
            +  L+ + VV I+ G+ +   L        V++ G    G+LGH    ++  P+L+E  
Sbjct: 241 -VSALKTLGVVYISCGHEHTAVLT---QNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGI 296

Query: 207 QLLNLQPVVVAAGAWHA-AVVGQDGRVCTWGWGR--YGCLGHGN--EECESVPKVVQA-- 259
           + L  Q   +  G++H  A V   G+V ++G G     C  H     E   V  ++ A  
Sbjct: 297 EGLVSQ---IDCGSYHTLAYVYTTGQVVSFGRGPSCKSCSNHPELLTENTDVTCLISAER 353

Query: 260 LNDVKAIHVATGDYTTFVVS 279
           L DV+  H+  G +  FV +
Sbjct: 354 LVDVQVKHIFAGTHANFVTT 373



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 22/262 (8%)

Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYC 164
           QAA G   + +L  +G V++    +  +LG      + +P P+   LE + V  ++ G  
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPI-QALETLRVELVSCGKE 96

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF--QLLNLQPVVVAAGAWH 222
           + LA+  +     V++ G G  G+LG G   + K   LI Q    L  ++ + V+ G +H
Sbjct: 97  HSLAVCYKGR---VFAWGAGSEGQLGIG---EFKEINLIPQKIKTLTGIKIIQVSCGNYH 150

Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
           +  + +DG+V +WG   +G LG G E   ++ P+ V++L+ +    VA G   +F +S  
Sbjct: 151 SLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLS 210

Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
           G  + +G   +  L          N       P+ V++LK +   VV IS  +      H
Sbjct: 211 GTSFGWGSNNAGQLAFFG-----SNVPVQSYKPRSVSALKTLG--VVYISCGHE-----H 258

Query: 342 TFALTESGKLYAFGAGDKGQLG 363
           T  LT++GK++ FG    GQLG
Sbjct: 259 TAVLTQNGKVFTFGDNSCGQLG 280



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
           A+G  H+ ++  DG V + G    G LG    + E  PK +QAL  ++   V+ G   + 
Sbjct: 40  ASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSL 99

Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
            V   G V+++G G    LG     +         L PQ + +L  +  +++Q+S     
Sbjct: 100 AVCYKGRVFAWGAGSEGQLGIGEFKEIN-------LIPQKIKTLTGI--KIIQVSCG--- 147

Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
             N H+ AL+E G+++++G+   GQLG  L      + +P+RV
Sbjct: 148 --NYHSLALSEDGQVFSWGSNSHGQLG--LGKELPSQASPQRV 186


>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
           strain 10D]
          Length = 457

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 159/370 (42%), Gaps = 70/370 (18%)

Query: 49  IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV------ESLKNIF 102
           ++Q A G   T ++   G +Y  G   +G+   G Q  + V+ P  V      E++ N+ 
Sbjct: 64  VLQVACGGSHTAILLRNGALYTVGHGLYGQLGLG-QRIRRVSLPTRVRGVLGPEAITNVG 122

Query: 103 VVQA---------AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLEN 153
              A         A G + T  +S +GR++++  G + RLG  TE     P P+    E 
Sbjct: 123 RSSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEK 182

Query: 154 IP-----------------VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
           +P                 +V +  GY + +AL+       VY+ G G  G+LGHGS  D
Sbjct: 183 VPGQPGNVRRSLAIPSECQIVAVECGYHHSVALSAI---GVVYTCGWGAYGQLGHGSCND 239

Query: 197 EKHPRLIE-QFQ------LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----- 244
           E  P L+   F+      L NL+ + VA+G  H  V+  DGR+  +G   YG LG     
Sbjct: 240 E--PSLLAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSC 297

Query: 245 -------HGNEECE-SVPKVVQ--ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
                    +++C  S P+++   AL   +   +A G+  +  +S+ G+V  +G G S  
Sbjct: 298 DQETAENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQ 357

Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
           L       G G       TPQ+   L   N  +    +T     + +T  L    ++Y  
Sbjct: 358 L-------GLGESITMTPTPQI---LNTRNSPLASRRVTGIACGHENTLFLVSDNEIYVT 407

Query: 355 GAGDKGQLGI 364
           G+G+ G LGI
Sbjct: 408 GSGEYGLLGI 417



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 57/260 (21%)

Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----------PRLIEQ 205
           V+Q+A G  +   L       A+Y+VG GL G+LG G R               P  I  
Sbjct: 64  VLQVACGGSHTAILL---RNGALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITN 120

Query: 206 F---QLLNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL- 260
                 + L P+  VA G +H   V  DGR+ +WG G+ G LG G E    +P  V  + 
Sbjct: 121 VGRSSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQ 180

Query: 261 -----------------NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
                            ++ + + V  G + +  +S  G VY+ G G    LGH +  D 
Sbjct: 181 EKVPGQPGNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDE 240

Query: 304 QG-------NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
                    + H N L           N R+++++  +      HT  LT+ G++Y FG+
Sbjct: 241 PSLLAVTFRDEHGNALP----------NLRIIKVASGDR-----HTLVLTDDGRIYGFGS 285

Query: 357 GDKGQLGIELVNNQTERGNP 376
            + GQLGI +  +Q    NP
Sbjct: 286 NEYGQLGITMSCDQETAENP 305



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 92/226 (40%), Gaps = 33/226 (14%)

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT--------LENI 154
           +V    G   +  LS  G VYT  WG   +LGH +  ND EP  L  T        L N+
Sbjct: 202 IVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGS-CND-EPSLLAVTFRDEHGNALPNL 259

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-------------HPR 201
            ++++A+G  + L L        +Y  G    G+LG     D++              PR
Sbjct: 260 RIIKVASGDRHTLVLT---DDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPR 316

Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQAL 260
           L+    L   +   +A G  H+  +   G V  WG G  G LG G        P+++   
Sbjct: 317 LLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQILNTR 376

Query: 261 NDVKAIHVATG-----DYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
           N   A    TG     + T F+VS D ++Y  G GE   LG  A A
Sbjct: 377 NSPLASRRVTGIACGHENTLFLVS-DNEIYVTGSGEYGLLGIGAGA 421



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 43  SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-----------AEYGVQGTKLVTS 91
           +L  +RII+ A+G   T++++D G++Y FG + +G+           AE       + + 
Sbjct: 255 ALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSE 314

Query: 92  PQLVE--SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
           P+L+   +L    + Q A G   +  LS +G V  +  G   +LG   E   + P P + 
Sbjct: 315 PRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLG-LGESITMTPTPQIL 373

Query: 150 TLENIP-----VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
              N P     V  IA G+   L L    S   +Y  G G  G LG G+      PR+  
Sbjct: 374 NTRNSPLASRRVTGIACGHENTLFLV---SDNEIYVTGSGEYGLLGIGAGA----PRMAF 426

Query: 205 QFQLLNLQPVV----VAAGAWHAAVVG 227
           +   + L P         G +HAA  G
Sbjct: 427 EPVRVQLPPGFRVDRATMGHFHAAAWG 453



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 33/225 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV---------ESL 98
           +I+    G   ++ +S  G VY  G  ++G+  +G         P L+          +L
Sbjct: 201 QIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHG----SCNDEPSLLAVTFRDEHGNAL 256

Query: 99  KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDV-------EPH 145
            N+ +++ A G+  T VL+ +GR+Y F      +LG        T  N         EP 
Sbjct: 257 PNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPR 316

Query: 146 PLL-GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLI 203
            L  G L    + QIA G  + +AL+ Q     V   G G+ G+LG G S T    P+++
Sbjct: 317 LLTGGALAGRRIAQIACGERHSVALSDQGE---VICWGHGMSGQLGLGESITMTPTPQIL 373

Query: 204 --EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
                 L + +   +A G  +   +  D  +   G G YG LG G
Sbjct: 374 NTRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIG 418


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 50/336 (14%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            ++  A G   ++ +S  G V+++G +S G+      G + +T   ++  +  ++     
Sbjct: 39  NVVSLAGGEKHSLAVSGDGSVWSWGSNSAGQL-----GVESLTPASVLAPVHALYS---- 89

Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
            G+ F      +G         D       +P    P  L G    +P+  +AAG  + L
Sbjct: 90  -GDDFHLFYDTDGDGT-----GDICDDCPYDPFKTAPG-LSGCGNAVPM--LAAGTQFSL 140

Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
            L    +   V+S GC     LG G R D   P+ +E         V +AAG  H   + 
Sbjct: 141 GLKTDGT---VWSWGCNTYATLGLGDRVDRNTPQKVEALS----NAVALAAGDDHTLALT 193

Query: 228 QDGRVCTWGWGRYGCLGHGN---EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 284
           +DG V +WGW   G LG G+   +  ES PK V+A+++V AI   T  Y T  ++ DG+V
Sbjct: 194 RDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQT--YHTQALTRDGNV 251

Query: 285 YSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFA 344
           +S+G  +   LG       Q +R A    PQ V +L      VV I+   +     H+ A
Sbjct: 252 WSWGSNDFGQLGMGD----QNDRDA----PQKVEALS----NVVAINAGGN-----HSLA 294

Query: 345 LTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
           +T  G+++A+G   +GQLG+    +  +R  P++V+
Sbjct: 295 VTRDGQVWAWGENSEGQLGL---GDLWDRDAPQKVE 327



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 32/260 (12%)

Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
           A G  F+  L  +G V+++     A LG     +   P  +   L N   V +AAG  + 
Sbjct: 133 AAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVE-ALSN--AVALAAGDDHT 189

Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGS---RTDEKHPRLIEQFQLLNLQPVVVAAGAWHA 223
           LAL    S   V+S G    G+LG GS    T E  P+ +E    +      +AA  +H 
Sbjct: 190 LALTRDGS---VWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNV----TAIAAQTYHT 242

Query: 224 AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 283
             + +DG V +WG   +G LG G++     P+ V+AL++V AI+   G   +  V+ DG 
Sbjct: 243 QALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAINA--GGNHSLAVTRDGQ 300

Query: 284 VYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTF 343
           V+++G      LG   + D    R A    PQ V +L      VV I+         HT 
Sbjct: 301 VWAWGENSEGQLGLGDLWD----RDA----PQKVEALS----NVVAINAGGD-----HTL 343

Query: 344 ALTESGKLYAFGAGDKGQLG 363
           ALT  G ++A+G   +GQ+G
Sbjct: 344 ALTRDGSVWAWGKNGRGQIG 363



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 18/214 (8%)

Query: 30  LGREVN-GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG-VQGTK 87
           LG  V+  TP    +L     +  AAG   T+ ++  G V+++G +  G+   G +    
Sbjct: 161 LGDRVDRNTPQKVEALS--NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDT 218

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
             ++P+ VE++ N+  + A    + T  L+R+G V+++   +  +LG   + ND +    
Sbjct: 219 YESTPKKVEAISNVTAIAAQT--YHTQALTRDGNVWSWGSNDFGQLGMGDQ-NDRDAPQK 275

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           +  L N  VV I AG  + LA+        V++ G    G+LG G   D   P+ +E   
Sbjct: 276 VEALSN--VVAINAGGNHSLAVT---RDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALS 330

Query: 208 LLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYG 241
            +    V + AG  H   + +DG V  W WG+ G
Sbjct: 331 NV----VAINAGGDHTLALTRDGSV--WAWGKNG 358



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 60/244 (24%)

Query: 175 GMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVC 233
           G A+++ G    G+LG G+  D+  P      QL  L  VV +A G  H+  V  DG V 
Sbjct: 6   GGALWTWGGNDDGRLGIGATGDQNLP-----VQLSYLSNVVSLAGGEKHSLAVSGDGSVW 60

Query: 234 TWGWGRYGCLGHGNEECESVPKVVQAL---NDVKAIHVATGDYTTFVVSE---------- 280
           +WG    G LG  +    SV   V AL   +D    +   GD T  +  +          
Sbjct: 61  SWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAP 120

Query: 281 ------------------------DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
                                   DG V+S+GC   A+LG        G+R  +  TPQ 
Sbjct: 121 GLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLG-------LGDR-VDRNTPQK 172

Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNP 376
           V +L         ++L      + HT ALT  G ++++G    GQLG+  ++  T    P
Sbjct: 173 VEALSNA------VALAAG---DDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTP 223

Query: 377 ERVD 380
           ++V+
Sbjct: 224 KKVE 227



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 48  RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
            ++   AG   ++ ++  GQV+A+G++S  E + G+       +PQ VE+L N+  + A 
Sbjct: 281 NVVAINAGGNHSLAVTRDGQVWAWGENS--EGQLGLGDLWDRDAPQKVEALSNVVAINA- 337

Query: 108 IGNFFTAVLSREGRVYTFSWGNDAR 132
            G   T  L+R+G V+  +WG + R
Sbjct: 338 -GGDHTLALTRDGSVW--AWGKNGR 359


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 45/324 (13%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLV 95
           P     L    +IQAA G   T+ ++D G VYA G +  G+   GV G KL  +TSP  +
Sbjct: 149 PTQVADLADFNVIQAACGRNHTLFLTDTGTVYACGDNKSGQC--GV-GNKLPTITSPTRI 205

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN------------DVE 143
            S     +++   G  F+ +L  +G ++TF      +LGH+T+              + +
Sbjct: 206 -SYNGPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQ 264

Query: 144 PHPLLGTL-----------ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
           P  +L  +           EN+ ++  A G  + +A+    S    YS G G  G+LGH 
Sbjct: 265 PRKVLVYMEKNKEGHVLPIENVNIIDFACGNNHTVAID---SKNRAYSWGFGGIGRLGHA 321

Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 252
            + DE  PRLI+ F   N + + V  G+ ++  +   G +  +G  +         E   
Sbjct: 322 EQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSLAISDIGSLYLFGQNK------KTGEANM 375

Query: 253 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
            PK VQ L       + TG YT+ V+S D  + ++G   S + G   + D Q +      
Sbjct: 376 YPKPVQDLAGWNITSIGTG-YTSIVISADDSLIAWGA--SPTYGELGLGDLQKSSS---- 428

Query: 313 TPQLVTSLKQVNERVVQISLTNSI 336
           TP+ VT ++ +   +V +  ++S+
Sbjct: 429 TPKEVTRMEGMKIPMVALGYSHSM 452



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 47/273 (17%)

Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
           + ++    + +TF     ++LGH       +P  +   L +  V+Q A G  + L L   
Sbjct: 118 SVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQV-ADLADFNVIQAACGRNHTLFLT-- 174

Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL-LNLQPVV-VAAGAWHAAVVGQDG 230
                VY+ G    G+ G G+    K P +    ++  N  P++ V  GA  + ++   G
Sbjct: 175 -DTGTVYACGDNKSGQCGVGN----KLPTITSPTRISYNGPPIIKVGCGAEFSVILDIKG 229

Query: 231 RVCTWGWGRYGCLGHGNE------------ECESVPKVVQA------------LNDVKAI 266
            + T+G   YG LGH  +              E+ P+ V              + +V  I
Sbjct: 230 NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNII 289

Query: 267 HVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNER 326
             A G+  T  +      YS+G G    LGH    D         + P+L+      N +
Sbjct: 290 DFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDE--------MVPRLIKFFDTQNRK 341

Query: 327 VVQISLTNSIYWNAHTFALTESGKLYAFGAGDK 359
           V+++   +S     ++ A+++ G LY FG   K
Sbjct: 342 VMRVFCGSS-----YSLAISDIGSLYLFGQNKK 369



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
           A H+ ++ ++ +  T+G  +   LGHG+      P  V  L D   I  A G   T  ++
Sbjct: 115 AAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQAACGRNHTLFLT 174

Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV---VQISLTNSI 336
           + G VY+ G  +S          G GN+   + +P  ++       +V    + S+   I
Sbjct: 175 DTGTVYACGDNKSGQC-------GVGNKLPTITSPTRISYNGPPIIKVGCGAEFSVILDI 227

Query: 337 YWNAHTFALTESGKL 351
             N HTF L E G+L
Sbjct: 228 KGNLHTFGLPEYGQL 242



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 15/214 (7%)

Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
           A +C              ++ G     +LGHG     + P  +      N+  +  A G 
Sbjct: 110 ASFCSAAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNV--IQAACGR 167

Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 280
            H   +   G V   G  + G  G GN+          + N    I V  G   + ++  
Sbjct: 168 NHTLFLTDTGTVYACGDNKSGQCGVGNKLPTITSPTRISYNGPPIIKVGCGAEFSVILDI 227

Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLT------PQLVTSLKQVNER--VVQISL 332
            G++++FG  E   LGHN   DG+   ++  ++      P+ V    + N+   V+ I  
Sbjct: 228 KGNLHTFGLPEYGQLGHNT--DGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIEN 285

Query: 333 TNSIYW---NAHTFALTESGKLYAFGAGDKGQLG 363
            N I +   N HT A+    + Y++G G  G+LG
Sbjct: 286 VNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLG 319


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 16/293 (5%)

Query: 38  PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           P     L G +I   + G+G   +L +  G+V+ +G +++ +   G     LV    +  
Sbjct: 65  PRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 123

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V++ A G++ + VL+ +G V+ + + N  ++G  +  N   P  + G L+N  V
Sbjct: 124 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 183

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
           V IA G   + ++A   +G  VY  G    G+LG GS  ++  P  +   Q + +Q V  
Sbjct: 184 VNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRV-- 238

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
           A G  H  V+  +G+V  WG   YG LG GN+  +S P  V    D    + A H A   
Sbjct: 239 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 295

Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
           +T+   ++ G VY +G C G+S  L H        +  A   TP +   L  V
Sbjct: 296 HTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVTWRLLSV 348



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 17/195 (8%)

Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
           V++ G     +LG+G+      P  I    L N Q + VA G++H+ V+  DG V  WG+
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154

Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
              G +G G+   + +P +V   L +   +++A G   +  V + G+VY +G   +  LG
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 214

Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
             +          N  TP  V++L+ +  RV +++        AHT  LT+ G++YA+GA
Sbjct: 215 LGS--------SGNQPTPCRVSALQGI--RVQRVACG-----YAHTLVLTDEGQVYAWGA 259

Query: 357 GDKGQLGIELVNNQT 371
              GQLG    +NQ+
Sbjct: 260 NSYGQLGTGNKSNQS 274



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 24  NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
           NG+  L       TP    +LQGIR+ + A G   T++++D GQVYA+G +S+G+   G 
Sbjct: 210 NGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 269

Query: 84  QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
           +  +   +P +VE    I  + A      +A  ++ G VY   WG
Sbjct: 270 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYM--WG 311


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 22/215 (10%)

Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
           L+   ++QIA G  + LAL+    G  +++ G  L G+LG G        P+ +E    +
Sbjct: 103 LQEKSIIQIACGDYHSLALS---KGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGV 159

Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
            L  V ++AG  H+  +   G V +WG    G LG G+ + E  P +++ L++ +   +A
Sbjct: 160 PL--VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLA 217

Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
            G   T +++ DG V++FG G+   LGHN+          N L P+LVT L     RV Q
Sbjct: 218 CGGSHTALLTTDGLVFTFGAGKYGQLGHNST--------QNELRPRLVTEL--AGNRVTQ 267

Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
           I+         HT A +++ GK+++FG+G +GQLG
Sbjct: 268 IACGRR-----HTLAYVSDLGKVFSFGSGKEGQLG 297



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 29/259 (11%)

Query: 44  LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
           LQ   IIQ A G   ++ +S  G+++A+G++  G+   G     + T PQ VE L  + +
Sbjct: 103 LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT-PQAVEHLSGVPL 161

Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHP-LLGTLENIPVVQ 158
           VQ + G   +  LS  G VY  SWG +      LGH     D E  P L+ TL+N  V  
Sbjct: 162 VQISAGKAHSMALSMSGNVY--SWGRNDLGQLGLGH----TDGEDFPSLIETLDNQQVEF 215

Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
           +A G  +   L     G+ V++ G G  G+LGH S  +E  PRL+   +L   +   +A 
Sbjct: 216 LACGGSHTALLTT--DGL-VFTFGAGKYGQLGHNSTQNELRPRLVT--ELAGNRVTQIAC 270

Query: 219 GAWHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVP-----------KVVQALNDVKAI 266
           G  H  A V   G+V ++G G+ G LG+G    + +P           K     +D + +
Sbjct: 271 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELV 330

Query: 267 HVATGDYTTFVVSEDGDVY 285
            +A G+ +  +  E  + Y
Sbjct: 331 MIAGGNQSVLLWMEKKNPY 349



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
           TP     L G+ ++Q +AG   +M +S +G VY++G++  G+   G+  T     P L+E
Sbjct: 149 TPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQL--GLGHTDGEDFPSLIE 206

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
           +L N  V   A G   TA+L+ +G V+TF  G   +LGH++  N++ P  L+  L    V
Sbjct: 207 TLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPR-LVTELAGNRV 265

Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
            QIA G  + LA         V+S G G  G+LG+G   ++  P
Sbjct: 266 TQIACGRRHTLAYVSDLG--KVFSFGSGKEGQLGNGGTHNQLIP 307


>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 22/276 (7%)

Query: 37  TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLV 95
           +P+ C S     +   A G   T+ ++++G+VYA G ++FG  + G+   K   T P  V
Sbjct: 103 SPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG--QLGISDEKRFSTEPVEV 160

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENI 154
              K    + A   +  + V++ +G +Y +   ++ +LG   +       P  + +L+ I
Sbjct: 161 RIPKEAMHISAGYNH--SCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGI 218

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG---------SRTDEKHPRLIEQ 205
            + + A G  + +A+A    G  V+S G G  G+LGHG           T E  PRLI++
Sbjct: 219 VIKRAALGSDHSIAVA---DGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKE 275

Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
            + + ++   VAAG  H+A V ++G V  +G      +  G     + P ++  L D + 
Sbjct: 276 LEGIKVKH--VAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE- 332

Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIA 301
             VA G Y T V+++ GD+YS+G  E+  LG+ + +
Sbjct: 333 -EVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 367



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 145/336 (43%), Gaps = 48/336 (14%)

Query: 61  LISDAGQVYA--FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
             SD+G+ +   +G   FG    G   ++   SP    S     +   A G   T  L+ 
Sbjct: 73  FASDSGKRFGAVWGNGDFGRLGLGNLDSQW--SPVPCSSFDREMLKGIACGGAHTLFLTE 130

Query: 119 EGRVYTFSWGNDARLGHHTEPN-DVEPHPLLGTLENIP--VVQIAAGYCYLLALACQPSG 175
            GRVY     N  +LG   E     EP  +      IP   + I+AGY +   +      
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEV-----RIPKEAMHISAGYNHSCVVTADGE- 184

Query: 176 MAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCT 234
             +Y  G    G+LG G ++  K   L  +   L+   +  AA G+ H+  V   G V +
Sbjct: 185 --LYMWGVNSNGQLGLGKKS-AKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFS 241

Query: 235 WGWGRYGCLGHGNEE---------CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 285
           WG GR G LGHG+E           E  P++++ L  +K  HVA G   +  V E+G VY
Sbjct: 242 WGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVY 301

Query: 286 SFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFAL 345
            FG  E A+   N ++ G+ N+     TP L+++L    E               HT  L
Sbjct: 302 IFG--ERAT---NRVSFGEANK---ATTPSLISTLLDCEEVACG---------GYHTCVL 344

Query: 346 TESGKLYAFGAGDKGQLGIELVNNQTERGN-PERVD 380
           T+ G LY++G+ + G LG    N  T   + PERV+
Sbjct: 345 TKGGDLYSWGSNENGCLG----NGSTSVSHLPERVE 376



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
           +  +AG   + +++  G++Y +G +S G+   G +  K V  P  V+SL  I + +AA+G
Sbjct: 167 MHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALG 226

Query: 110 NFFTAVLSREGRVYTFSWGNDARLGHHTE-------PNDVEPHP-LLGTLENIPVVQIAA 161
           +  +  ++  G V+++  G   RLGH  E        +  E  P L+  LE I V  +AA
Sbjct: 227 SDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAA 286

Query: 162 GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
           G   +L  AC     AVY  G     ++  G       P LI    LL+ +   VA G +
Sbjct: 287 G---MLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLIS--TLLDCEE--VACGGY 339

Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
           H  V+ + G + +WG    GCLG+G+     +P+ V+
Sbjct: 340 HTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 376


>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1086

 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 42/289 (14%)

Query: 45  QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK-------LVTSPQL-VE 96
           +G++ IQ +AG   ++ +S+ G  YA+G D +G+      G+        LV +P    +
Sbjct: 677 RGLKAIQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTD 736

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV-------------E 143
               +  +Q + GN  +  L   G VY + W +  +LG +T  ND+             +
Sbjct: 737 ESMGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNT--NDISEDSHSAFPVRVRD 794

Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK--HPR 201
           P     T   +  +QI+AGY + +A+     G A Y+ G  + G+LG+ + +D    +P 
Sbjct: 795 PANPSETNMGLKAIQISAGYDHSMAVGSD--GYA-YAWGWNVKGQLGNNTISDSYSGNPV 851

Query: 202 LIEQFQLLN-------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
            +      N       L+   V+AG WH+  VG DG    WG+  YG LG+  +    VP
Sbjct: 852 PVHVRDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVP 911

Query: 255 KVVQALND-------VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
             V+   +       +KA  +++G + +  V  +G VY++G   +  LG
Sbjct: 912 VPVRDPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLG 960



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 54/360 (15%)

Query: 50  IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-------SPQLVESLKNIF 102
           +Q +AG   ++ +   G  YA+G ++ G+     +    V        SP   +  + + 
Sbjct: 623 VQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSP--TDESRGLK 680

Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENIPV--- 156
            +Q + G + +  LS +G  Y ++WG D   +LG++T   ++  P P+L    + P    
Sbjct: 681 AIQVSAGYWHSLALSNDG--YAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDES 738

Query: 157 -----VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR--TDEKHPRLIEQFQL- 208
                +Q++AG  + LAL    S   VY+ G    G+LG  +   +++ H     + +  
Sbjct: 739 MGLKTIQVSAGNLHSLALD---SNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDP 795

Query: 209 -------LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQA 259
                  + L+ + ++AG  H+  VG DG    WGW   G LG+   ++     P  V  
Sbjct: 796 ANPSETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHV 855

Query: 260 LND---------VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHAN 310
            +          +KA  V+ G + +  V  DG  Y +G      LG+N   D      + 
Sbjct: 856 RDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTD------SY 909

Query: 311 VLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
           V  P    +      + ++ +  +S YW  H+ A+   G +YA+G    G+LG    N +
Sbjct: 910 VPVPVRDPANPTDTNKGLKATQISSGYW--HSMAVGSEGYVYAWGNNGNGRLGDGTTNGK 967



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 148/341 (43%), Gaps = 45/341 (13%)

Query: 59  TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--------VVQAAIGN 110
           ++ +   G  YA+G +++G+   G       T  ++    +  +         VQ + G 
Sbjct: 570 SLAVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQVSAGG 629

Query: 111 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP----HPLLGTLEN--IPVVQIAAGYC 164
             +  +  +G  Y +   N+ +LG++T+ N   P     P   T E+  +  +Q++AGY 
Sbjct: 630 RHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDESRGLKAIQVSAGYW 689

Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGH---GSRTDEKHPRLIEQ-----FQLLNLQPVVV 216
           + LAL+    G A Y+ G    G+LG+   GS      P L+        + + L+ + V
Sbjct: 690 HSLALSND--GYA-YAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESMGLKTIQV 746

Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-----SVP-KVVQALND------VK 264
           +AG  H+  +  +G V  WGW  YG LG    +       + P +V    N       +K
Sbjct: 747 SAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPSETNMGLK 806

Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNR-HANVLTPQLVTSLKQ 322
           AI ++ G   +  V  DG  Y++G      LG+N I+D   GN    +V  P   T   +
Sbjct: 807 AIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPANPTDTSK 866

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
              +  Q+S   + YW  H+ A+   G  Y +G    GQLG
Sbjct: 867 -GLKATQVS---AGYW--HSLAVGSDGYAYGWGYNWYGQLG 901



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 28/237 (11%)

Query: 46  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFG----------EAEYGVQGTKLVTSPQLV 95
           G++ IQ +AG   ++ +   G VYA+G +S+G          E  +     ++       
Sbjct: 740 GLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPS 799

Query: 96  ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-------- 147
           E+   +  +Q + G   +  +  +G  Y + W    +LG++T  +    +P+        
Sbjct: 800 ETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPA 859

Query: 148 --LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
               T + +   Q++AGY + LA+     G A Y  G    G+LG+ ++TD   P  +  
Sbjct: 860 NPTDTSKGLKATQVSAGYWHSLAVGSD--GYA-YGWGYNWYGQLGNNTKTDSYVPVPVRD 916

Query: 206 FQLLN-----LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
                     L+   +++G WH+  VG +G V  WG    G LG G    +  P  V
Sbjct: 917 PANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAPVSV 973



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 31/230 (13%)

Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-------------P 200
           I   QI++      +LA    G A Y+ G    G+LG G+  + ++             P
Sbjct: 556 IKFNQISSSNTGSFSLAVGSDGNA-YAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYP 614

Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
            L   F       V V+AG  H+  VG DG    WG    G LG+  +    VP  ++  
Sbjct: 615 DLPADFTY-----VQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDP 669

Query: 261 ND-------VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
                    +KAI V+ G + +  +S DG  Y++G      LG+N     + +    ++ 
Sbjct: 670 GSPTDESRGLKAIQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVR 729

Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
                + + +  + +Q+S       N H+ AL  +G +YA+G    GQLG
Sbjct: 730 NPDSPTDESMGLKTIQVSAG-----NLHSLALDSNGYVYAWGWNSYGQLG 774


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 31/331 (9%)

Query: 38  PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVE 96
           P   +  +   I Q +AG   T+ +S+ G +Y  G +  G+   G Q      TSP LV+
Sbjct: 26  PTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQL--GRQTNSADGTSPVLVD 83

Query: 97  SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENI 154
           + K   +   A G   +  L   G+   FSWG+D+  +LG +   +  +   ++ TL   
Sbjct: 84  TFKGCTLSTIACGLQHSMALDEWGQ--PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATK 141

Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQP 213
            V+Q+A G  + + L    +   +Y+ G    G+ G G+R++ E  P+ +    +L +  
Sbjct: 142 NVIQVACGSYHTVVLT---NNGDLYAWGANSYGQCGLGNRSNKETTPQALSS--ILGIPI 196

Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
            ++A G+ H   + Q G V  WG   +G LG  + E    P  ++ L +VK  H++ G+ 
Sbjct: 197 ALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGED 256

Query: 274 TTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLT 333
            T  ++ DG V++ G GE    GH    D         L P+ V  L  +   V Q++  
Sbjct: 257 FTAFLTLDGGVFTCGAGEYGQTGHGNTKDE--------LVPRKVMEL--MGSTVTQVAC- 305

Query: 334 NSIYWNAHTFALTESG-KLYAFGAGDKGQLG 363
                      L   G ++ A G G +GQLG
Sbjct: 306 ------GRRHMLCRVGERILACGYGARGQLG 330



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 31/250 (12%)

Query: 125 FSWGNDARLGHHTE----PN--DVEPHPLLGTL-ENIPVVQIAAGYCYLLALACQPSGMA 177
           F WGN     HH      P   D+   P L    E+  + QI+AG  + L L+   +   
Sbjct: 2   FCWGNAT---HHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLS---NNGH 55

Query: 178 VYSVGCGLGGKLGHGSRT-DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWG 236
           +Y+ G    G+LG  + + D   P L++ F+   L    +A G  H+  + + G+  +WG
Sbjct: 56  LYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLS--TIACGLQHSMALDEWGQPFSWG 113

Query: 237 WGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
               G LG       +  PK+++ L     I VA G Y T V++ +GD+Y++G       
Sbjct: 114 SDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQC 173

Query: 296 GHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFG 355
           G        GNR     TPQ ++S+  +   ++          + HTFAL++SG ++ +G
Sbjct: 174 G-------LGNRSNKETTPQALSSILGIPIALIACG-------SNHTFALSQSGAVFGWG 219

Query: 356 AGDKGQLGIE 365
               GQLG++
Sbjct: 220 KNSHGQLGLQ 229



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 14/218 (6%)

Query: 30  LGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 89
           LG      P   ++L    +IQ A G+  T+++++ G +YA+G +S+G+   G +  K  
Sbjct: 124 LGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK-E 182

Query: 90  TSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL 147
           T+PQ + S+  I +   A G+  T  LS+ G V  F WG ++  +LG     +   P   
Sbjct: 183 TTPQALSSILGIPIALIACGSNHTFALSQSGAV--FGWGKNSHGQLGLQDRESRCYPTH- 239

Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
           L TL N+ V  I+ G  +   L        V++ G G  G+ GHG+  DE  PR +   +
Sbjct: 240 LKTLRNVKVCHISCGEDFTAFLTLDG---GVFTCGAGEYGQTGHGNTKDELVPRKV--ME 294

Query: 208 LLNLQPVVVAAGAWHAAV-VGQDGRVCTWGWGRYGCLG 244
           L+      VA G  H    VG+  R+   G+G  G LG
Sbjct: 295 LMGSTVTQVACGRRHMLCRVGE--RILACGYGARGQLG 330



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 28/281 (9%)

Query: 88  LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
           LV  P L +  ++  + Q + G F T  LS  G +YT       +LG  T   D     L
Sbjct: 22  LVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVL 81

Query: 148 LGTLENIPVVQIAAGYCYLLALA--CQPSGMAVYSVGCGLGGKLGH--GSRTDEKHPRLI 203
           + T +   +  IA G  + +AL    QP     +S G    G+LG   GS   +K P++I
Sbjct: 82  VDTFKGCTLSTIACGLQHSMALDEWGQP-----FSWGSDSMGQLGSNLGSHAQDK-PKII 135

Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALND 262
           +     N+  + VA G++H  V+  +G +  WG   YG  G GN    E+ P+ + ++  
Sbjct: 136 KTLATKNV--IQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILG 193

Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQ 322
           +    +A G   TF +S+ G V+ +G      LG   + D +   +     P  + +L+ 
Sbjct: 194 IPIALIACGSNHTFALSQSGAVFGWGKNSHGQLG---LQDRESRCY-----PTHLKTLRN 245

Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
           V  +V  IS          T  LT  G ++  GAG+ GQ G
Sbjct: 246 V--KVCHISCGEDF-----TAFLTLDGGVFTCGAGEYGQTG 279


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.136    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,410,918,778
Number of Sequences: 23463169
Number of extensions: 278425442
Number of successful extensions: 690934
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 2125
Number of HSP's that attempted gapping in prelim test: 609906
Number of HSP's gapped (non-prelim): 29704
length of query: 384
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 240
effective length of database: 8,980,499,031
effective search space: 2155319767440
effective search space used: 2155319767440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)