BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016725
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
V P E L N+ V Q A +LSR GRVYT ++ +D + P L+
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDT----------LAPQ-LV 487
Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 488 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 543
Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 544 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 603
Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 604 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 655
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
++ VV++ + + ALT+ G++Y++G GD +LG
Sbjct: 656 DLD--VVKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 690
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P C +L +R +Q G ++ G++YA G + G+ GT+ V++P L+ES
Sbjct: 3976 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4033
Query: 98 LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
++++F+ + A+ G LS EG VY++ D +LGH P ++ +L I
Sbjct: 4034 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4092
Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
VV +AAG + AC + +Y+ G G G+LGH D+ P+L+E Q + +
Sbjct: 4093 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149
Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
+G + D V +WG G YG LG G + VP + +L + + V G +
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4209
Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
+++ G VY++G G+ LGH + +V P+ V L+ ++V+ I+ T S
Sbjct: 4210 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4258
Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ H TE G++Y +G D+GQLG
Sbjct: 4259 L----HCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
P+ C L + + Q A R +++S G+VY A+ D+ +PQLV
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTL--------------APQLV 487
Query: 96 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 488 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ + V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 714
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 715 AAGST-----HCLALTEDSEVHSWGSNDQCQ 740
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 27/348 (7%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L + ++Q A G+ ++ G+VYA G+ + G
Sbjct: 2966 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024
Query: 80 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
G+ + V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH +
Sbjct: 3025 GLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3083
Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T +
Sbjct: 3084 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3139
Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P+
Sbjct: 3140 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3197
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
++ LN + G + +++ G V+++G G+ LGH + +V PQ
Sbjct: 3198 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3249
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 3250 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3290
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 121 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3014
Query: 180 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
+ G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3133
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+ L P++V L + RV+Q++ + +A T ALT+ G ++++G GD
Sbjct: 3134 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3181
Query: 359 KGQLG 363
G+LG
Sbjct: 3182 FGKLG 3186
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 10/258 (3%)
Query: 24 NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
+GK R P SL+GI ++ AAG + ++ AG +Y +GK +G +
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 84 QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
+L P+LVE+L+ VV A G + T L+ + V+++ G+ +LG
Sbjct: 4128 SEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4185
Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
P + +L + VV++ G + +AL SG AVY+ G G +LGHGS + PR
Sbjct: 4186 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
++ Q + + +A G+ H +DG V TWG G LG G P++V AL
Sbjct: 4242 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4299
Query: 262 DVKAIHVATGDYTTFVVS 279
K VA G T S
Sbjct: 4300 GKKVNRVACGSAHTLAWS 4317
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)
Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4001
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4002 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
LGH+ D L P+LV +L+ RVV I+ + +A T LT+ ++
Sbjct: 4121 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVVDIACGSG---DAQTLCLTDDDTVW 4167
Query: 353 AFGAGDKGQLG 363
++G GD G+LG
Sbjct: 4168 SWGDGDYGKLG 4178
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 33 EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
E P+ L+G+++I A G+G +T+ +++ GQV+++G +G + G G+
Sbjct: 589 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 646
Query: 91 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
+P+L+E L+++ VV+ G+ F+ L+++G+VY++ G++ RLGH TE + P LL
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 705
Query: 151 LENIPVVQIAAGYCYLLAL 169
L+ V+ +AAG + LAL
Sbjct: 706 LQGKKVIDVAAGSTHCLAL 724
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 38 PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
P + L G R+IQ A G+ +T+ ++D G V+++G FG + G G++ PQ +
Sbjct: 3142 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3199
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
E L V Q G F+ L++ G V+T+ G+ RLGH ++ + +P + G L
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3258
Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
+V +A G + LA+ SG VY+ G G+ G+G+ T + P L++ +
Sbjct: 3259 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP LQ + +++ G+ ++ ++ GQVY++GK +G + + V P+L+E
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 704
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIP 155
L+ V+ A G+ L+ + V+ SWG++ + H +P P L L+
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPAALPGLDTKH 762
Query: 156 VVQIAAG 162
+V IA G
Sbjct: 763 IVGIACG 769
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P C +L +R +Q G ++ G++YA G + G+ GT+ V++P L+ES
Sbjct: 3978 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA--GGRLGIGGTESVSTPTLLES 4035
Query: 98 LKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
++++F+ + A+ G LS EG VY++ D +LGH P ++ +L I
Sbjct: 4036 IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR-VIESLRGIE 4094
Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
VV +AAG + AC + +Y+ G G G+LGH D+ P+L+E Q + +
Sbjct: 4095 VVDVAAGGAHS---ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151
Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
+G + D V +WG G YG LG G + VP + +L + + V G +
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4211
Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
+++ G VY++G G+ LGH + +V P+ V L+ ++V+ I+ T S
Sbjct: 4212 VALTKSGAVYTWGKGDYHRLGHGS--------DDHVRRPRQVQGLQ--GKKVIAIA-TGS 4260
Query: 336 IYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ H TE G++Y +G D+GQLG
Sbjct: 4261 L----HCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 39/331 (11%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVY--AFGKDSFGEAEYGVQGTKLVTSPQLV 95
P+ C L + ++Q A R +++S G+VY A+ D + +PQLV
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD--------------MLAPQLV 488
Query: 96 ESL--KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH---PLLGT 150
+ L +NI + A L+ G VY++ G+ RLGH EP G
Sbjct: 489 QGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
VV IA G Y A+ + +Y+ G G G+LGHGS DE P L+ + L
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
+ V +G V ++G+V +WG G YG LG G + PK+++ L D+ I V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G + +++DG VYS+G G++ LGH +V P+L+ L+ ++V+ +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGT--------EEHVRYPKLLEGLQ--GKKVIDV 715
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 361
+ ++ H ALTE +++++G+ D+ Q
Sbjct: 716 AAGST-----HCLALTEDSEVHSWGSNDQCQ 741
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 151/282 (53%), Gaps = 37/282 (13%)
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
V P E L ++ V+Q A +LSR GRVYT ++ +D + P L+
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQ-LV 488
Query: 149 GTLENIPVVQIAA---GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
L + +V+IAA G+ Y LALA + VYS GCG GG+LGHG + P++I
Sbjct: 489 QGLASRNIVKIAAHSDGHHY-LALA---ATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 544
Query: 206 F--QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
F + V +A G+ ++A + +G + TWG G YG LGHG+ E E++P +V L +
Sbjct: 545 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGL 604
Query: 264 KAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
K I VA +GD T V+E+G V+S+G G+ LG +DG TP+L+ L+
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG-SDG-------CKTPKLIEKLQ 656
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
++ V+++ + + ALT+ G++Y++G GD +LG
Sbjct: 657 DLD--VIKVRCGSQF-----SIALTKDGQVYSWGKGDNQRLG 691
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 27/348 (7%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
+N+++ L G ++ P + +L + ++Q A G+ ++ G+VY+ G+ + G
Sbjct: 2967 LNDKDQLGGLKGSKIK-VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025
Query: 80 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
G+ + V P+ + +L + V + A+ G L+ +G+V+++ G+D +LGH +
Sbjct: 3026 GLGM-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 3084
Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
N +P L+ L+ + IA G + AL S +Y+ G G G+LGHG T +
Sbjct: 3085 RMNCDKPR-LIEALKTKRIRDIACGSSHSAALT---SSGELYTWGLGEYGRLGHGDNTTQ 3140
Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
P++++ LL + + VA G+ A + +G V +WG G +G LG G E ++P+
Sbjct: 3141 LKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
++ LN + G + +++ G V+++G G+ LGH + +V PQ
Sbjct: 3199 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQ 3250
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+V L+ +++V +++ H A+T+SG++YA+G D GQ G
Sbjct: 3251 VVEGLR--GKKIVHVAVGA-----LHCLAVTDSGQVYAWGDNDHGQQG 3291
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 121 RVYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
R F WG ND + + ++ TL + VVQ+A G L A+ + VY
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK---VY 3015
Query: 180 SVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
S G G+LG G S PR I ++ V V +G HA + DG+V +WG G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 239 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
G LGH + P++++AL + +A G + ++ G++Y++G GE LGH
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH- 3134
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGD 358
+ L P++V L + RV+Q++ + +A T ALT+ G ++++G GD
Sbjct: 3135 -------GDNTTQLKPKMVKVL--LGHRVIQVACGSR---DAQTLALTDEGLVFSWGDGD 3182
Query: 359 KGQLG 363
G+LG
Sbjct: 3183 FGKLG 3187
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 10/258 (3%)
Query: 24 NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
+GK R P SL+GI ++ AAG + ++ AG +Y +GK +G +
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 84 QGTKLVTSPQLVESLKNIFVVQAAIG--NFFTAVLSREGRVYTFSWGNDARLGHHTEPND 141
+L P+LVE+L+ V+ A G + T L+ + V+++ G+ +LG
Sbjct: 4130 SEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC 4187
Query: 142 VEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR 201
P + +L + VV++ G + +AL SG AVY+ G G +LGHGS + PR
Sbjct: 4188 KVPMKI-DSLTGLGVVKVECGSQFSVALT--KSG-AVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 202 LIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
++ Q + + +A G+ H +DG V TWG G LG G P++V AL
Sbjct: 4244 QVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4301
Query: 262 DVKAIHVATGDYTTFVVS 279
K VA G T S
Sbjct: 4302 GKKVNRVACGSAHTLAWS 4319
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 19/251 (7%)
Query: 115 VLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
LS G + WG++ R LG P P L + VQ+ G L A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTP-CEALATLRPVQLIGGEQTLFAVT-- 4003
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRV 232
+ +Y+ G G GG+LG G P L+E Q + ++ V V +G H + +G V
Sbjct: 4004 -ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
+WG G LGHGN P+V+++L ++ + VA G + V+ GD+Y++G G
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
LGH+ D L P+LV +L+ RV+ I+ + +A T LT+ ++
Sbjct: 4123 GRLGHSDSEDQ--------LKPKLVEALQ--GHRVIDIACGSG---DAQTLCLTDDDTVW 4169
Query: 353 AFGAGDKGQLG 363
++G GD G+LG
Sbjct: 4170 SWGDGDYGKLG 4180
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 33 EVNGTPLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 90
E P+ L+G+++I A G+G +T+ +++ GQV+++G +G + G G+
Sbjct: 590 EDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYG--KLGRGGSDGCK 647
Query: 91 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
+P+L+E L+++ V++ G+ F+ L+++G+VY++ G++ RLGH TE + P LL
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK-LLEG 706
Query: 151 LENIPVVQIAAGYCYLLAL 169
L+ V+ +AAG + LAL
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 38 PLYCRSLQGIRIIQAAAGA--GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
P + L G R+IQ A G+ +T+ ++D G V+++G FG + G G++ PQ +
Sbjct: 3143 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG--KLGRGGSEGCNIPQNI 3200
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
E L V Q G F+ L++ G V+T+ G+ RLGH ++ + +P + G L
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKK 3259
Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ 207
+V +A G + LA+ SG VY+ G G+ G+G+ T + P L++ +
Sbjct: 3260 IVHVAVGALHCLAVT--DSGQ-VYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP LQ + +I+ G+ ++ ++ GQVY++GK +G + + V P+L+E
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLE 705
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIP 155
L+ V+ A G+ L+ + V+ SWG++ + H +P P L L++
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKH 763
Query: 156 VVQIAAG 162
+V IA G
Sbjct: 764 IVGIACG 770
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
+++ +AGA ++ + V ++G+ G+ +G + SP + +L +V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVT 73
Query: 108 IGNFFTAVLSREG-RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
G T S+ G VY++ WG+ RLGH + P P+ L I + QIA G +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHC 132
Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
LA+ + V S G G+LG G D P+ I+ F+ + ++ +VAAGA H A V
Sbjct: 133 LAVTMEGE---VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK--MVAAGAEHTAAV 187
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+DG + WGWGRYG LG G+ VP+ V + K VA G T VS G +Y+
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G + LGH + D L P + +L N + QIS W HT ALT
Sbjct: 248 YGWSKYGQLGHGDLED--------HLIPHKLEALS--NSFISQISGG----WR-HTMALT 292
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
GKLY +G GQ+G V N ++ +P +V
Sbjct: 293 SDGKLYGWGWNKFGQVG---VGNNLDQCSPVQV 322
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TPL ++L GIRI Q A G + ++ G+V ++G++ G+ G LV PQ ++
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQ 167
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
+ + I + A G TA ++ +G +Y + WG LG + + P + T +
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST-GGEKM 226
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
+A G+ + ++++ SG A+Y+ G G+LGHG D P +E + +
Sbjct: 227 SMVACGWRHTISVSY--SG-ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI-- 281
Query: 217 AAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
+G W H + DG++ WGW ++G +G GN + P V+ +D K + V+ G T
Sbjct: 282 -SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHT 340
Query: 276 FVVSEDGDVYSFGCGESASLG 296
V+E +V+++G G + LG
Sbjct: 341 LAVTERNNVFAWGRGTNGQLG 361
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 23 RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
+NG+ L E + P ++ +GIRI AAGA T +++ G +Y +G +G G
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
+ +LV P+ V S + A G T +S G +YT+ W +LGH + +
Sbjct: 208 DRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265
Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
PH L L N + QI+ G+ + +AL S +Y G G++G G+ D+ P
Sbjct: 266 IPHKLE-ALSNSFISQISGGWRHTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPV- 320
Query: 203 IEQFQLLNLQPVVVAAGAW-HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
Q + + Q VV + W H V + V WG G G LG G + PK+++AL+
Sbjct: 321 --QVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 28/348 (8%)
Query: 20 INERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA 79
+N++ L G +V P + +++ +R I A G+ ++S G+VYA G+ + G
Sbjct: 2993 LNDKEQLGGLKGSKVK-VPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRL 3051
Query: 80 EYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHT 137
GV T V P + L+ V + A+ G L+ +G+V+++ G D +LGH
Sbjct: 3052 GLGV--THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGN 3109
Query: 138 EPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE 197
+P L+ L + +A G + A++ Q +Y+ G G G+LGHG T +
Sbjct: 3110 RTTLDKPR-LVEALRAKKIRDVACGSSHSAAISSQGE---LYTWGLGEYGRLGHGDNTTQ 3165
Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVG--QDGRVCTWGWGRYGCLGHGNEECESVPK 255
P+L+ L + V VA G+ A + +DG V +WG G +G LG G E P
Sbjct: 3166 LKPKLVTA--LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPH 3223
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
++ L+ + + + G + ++ G+V+++G G+ LGH G++H V PQ
Sbjct: 3224 EIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG------GDQH--VRKPQ 3275
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ L+ RV+ +++ H A+T++G++YA+G D GQ G
Sbjct: 3276 PIGGLR--GRRVIHVAVGA-----LHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 27/331 (8%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP C +L +R +Q A G ++ G+++A G S G G + + P L+
Sbjct: 4072 TPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI--PTLLG 4129
Query: 97 SLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
SL+++FV + A+ G L+ EG VY + G D +LGH + P L+ L +
Sbjct: 4130 SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPK-LVEHLNGM 4188
Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
V IA G + A+ SG V + G G G+LGHG D+ P+L+E LL + +
Sbjct: 4189 SVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGDSEDQLRPKLVE--ALLGYRAI 4243
Query: 215 VVAAGAWHAAV--VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 272
+A G+ A + D V +WG G YG LG G + +P +++L + + V G
Sbjct: 4244 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGS 4303
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
+ +++ G VY++G G+ LGH ++ +V P+ V +L+ ++++ I+
Sbjct: 4304 QFSVALTKSGAVYTWGKGDFHRLGHGSV--------DHVRRPKKVAALQ--GKKIISIA- 4352
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
T S+ H A ++SG++Y +G D+GQLG
Sbjct: 4353 TGSL----HCVACSDSGEVYTWGDNDEGQLG 4379
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 47 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
++ + +G + ++ G+V+++G+ G+ +G + T + P+LVE+L+ +
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDV 3130
Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYL 166
A G+ +A +S +G +YT+ G RLGH ++P L+ L VVQ+A G
Sbjct: 3131 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDA 3189
Query: 167 LALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
LA G AV+S G G GKLG G P IE+ + + V + GA + +
Sbjct: 3190 QTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV--VQIECGAQFSLAL 3246
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V TWG G Y LGHG ++ P+ + L + IHVA G V++ G VY+
Sbjct: 3247 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3306
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
+G + G GN N P LV L V V ++SI W
Sbjct: 3307 WGDNDHGQ-------QGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIAW 3350
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 23/313 (7%)
Query: 38 PLYCRSLQGIRIIQAAAGAG--RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV 95
P SLQ + + + A +G + ++ G+VYA+G+ G+ +G + + P+LV
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMS--YDRPKLV 4182
Query: 96 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 155
E L + V A G+ +A ++ G V T+ G RLGH + + P L+ L
Sbjct: 4183 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYR 4241
Query: 156 VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV 215
+ IA G L C V+S G G GKLG G K P IE L L V
Sbjct: 4242 AIDIACGSGDAQTL-CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LAGLGVVK 4298
Query: 216 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTT 275
V G+ + + + G V TWG G + LGHG+ + PK V AL K I +ATG
Sbjct: 4299 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHC 4358
Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNS 335
S+ G+VY++G + LG + Q P+LV +L+ + +V+++
Sbjct: 4359 VACSDSGEVYTWGDNDEGQLGDGTVTAIQ--------RPRLVAALQ--GKHIVKVTCG-- 4406
Query: 336 IYWNAHTFALTES 348
+AHT AL+ S
Sbjct: 4407 ---SAHTLALSTS 4416
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 42/335 (12%)
Query: 33 EVNGTP-LYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
E G P L CR +I Q A + +++S G++Y + + + EAE
Sbjct: 561 ESAGVPTLSCR----FQIKQVACCETQMLILSQEGKLYTW-RLAKPEAE----------- 604
Query: 92 PQLVESL-KNIFVVQA--AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 148
P +E + ++F+ A G F A+ S Y++ G D RLGH P +
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHN-AYSWGTGEDHRLGHGDTHARAVPTKI- 662
Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
LE V + G Y A+ C G + + G G +LGHG+ D P L+
Sbjct: 663 AALEQHCVQSVYCGCSYSAAITC---GGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD 719
Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV 268
+ V + +G H+ + +G V WG G YG LG+GN P +V++L V+ V
Sbjct: 720 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RV 777
Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG-QGNRHANVLTPQLVTSLKQVNERV 327
G + +S +G +Y++ G++ LGH + QG P+LV+SL+ ++R+
Sbjct: 778 FAGSQFSVALSSEGQLYTW--GKATCLGHQLVERSVQG-----CSVPRLVSSLQ--HKRI 828
Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 362
V ++++ AH AL+ SG+++ +G D Q+
Sbjct: 829 VDVAVS-----VAHCLALSSSGEVFGWGRNDSQQI 858
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 138/312 (44%), Gaps = 39/312 (12%)
Query: 67 QVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIF-VVQAAIGNFFTAVLSREGRV 122
++YA G S + + G ++ V +L F + Q A +LS+EG++
Sbjct: 534 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 593
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
YT+ + EP P+ ++ + IA G+C S YS G
Sbjct: 594 YTWRLAKP----------EAEPLPMEEVAHDV-FISIA-GHCEGRHFLAIDSNHNAYSWG 641
Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
G +LGHG P I + +Q V G ++A + G + TWG G Y
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY--CGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 243 LGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++G G+ LG+
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN--- 756
Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKG 360
GN + + L P LV SL +V +RV S + AL+ G+LY +G
Sbjct: 757 ----GNCNGS-LQPILVESLPRV-QRVFAGS--------QFSVALSSEGQLYTWGKATC- 801
Query: 361 QLGIELVNNQTE 372
LG +LV +
Sbjct: 802 -LGHQLVERSVQ 812
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V WG LG VP Q ++ ++ IH+A G + F+VS+DG VY+ G G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
+ L G G H NV P + L+Q + V + H ALT GK+
Sbjct: 3048 NGRL-------GLGVTH-NVPLPHQLPVLRQYVVKKVAVHSGGK-----HALALTLDGKV 3094
Query: 352 YAFGAGDKGQLGIELVNNQTERGNPERVD 380
+++G G+ G+LG N+T P V+
Sbjct: 3095 FSWGEGEDGKLG---HGNRTTLDKPRLVE 3120
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
L+G R+I A GA + ++DAGQVYA+G + G+ G T + P LV L +FV
Sbjct: 3280 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFV 3337
Query: 104 VQAAIGN 110
+ A G+
Sbjct: 3338 NRVACGS 3344
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQL 94
P+ SL R+ + AG+ ++ +S GQ+Y +GK + G E VQG + P+L
Sbjct: 765 PILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRL 819
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--L 151
V SL++ +V A+ LS G V F WG ND++ P V PLL T L
Sbjct: 820 VSSLQHKRIVDVAVSVAHCLALSSSGEV--FGWGRNDSQ---QICPASVSSEPLLRTPIL 874
Query: 152 ENIPVVQIAAGYC 164
++P + C
Sbjct: 875 VSLPTFPASGIAC 887
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 38/309 (12%)
Query: 57 GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 116
G ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVI 418
Query: 117 SREGRVYTFSWGNDARLGHHTEPND-------VEPHPLLGTLENIPVVQIAAGYCYLLAL 169
S +G V G+ RLG N EPH +++ + + + G+ L
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH---RSIKKVSSSKGSDGH----TL 471
Query: 170 ACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
A G V+S G G GKLGHG+ + +K+P+LI Q L V V+AG H+A V +D
Sbjct: 472 AFTTEG-EVFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTED 529
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFG 288
G + TWG G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFG 587
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTES 348
G++ LGH G NR V P+++ +L+ + R V +S+ ALT +
Sbjct: 588 GGDNGKLGH-----GDTNR---VYKPKVIEALQGMFIRKVCAGSQSSL-------ALTST 632
Query: 349 GKLYAFGAG 357
G++YA+G G
Sbjct: 633 GQVYAWGCG 641
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 25/312 (8%)
Query: 54 AGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG-NFF 112
AG T +IS G V A GK S+G G + E ++I V ++ G +
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH 469
Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
T + EG V+++ G+ +LGH P + G L+ VV ++AGY + A+
Sbjct: 470 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT-- 527
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGR- 231
+Y+ G G G+LGHG P L++ + V+ G+ H + +DGR
Sbjct: 528 -EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRT 582
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
V ++G G G LGHG+ PKV++AL + V G ++ ++ G VY++GCG
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
A LG G+ A L P+L+ L R+V +S+ +S H AL+ ++
Sbjct: 642 -ACLGC-------GSSEATALRPKLIEELAAT--RIVDVSIGDS-----HCLALSHDNEV 686
Query: 352 YAFGAGDKGQLG 363
YA+G GQ G
Sbjct: 687 YAWGNNSMGQCG 698
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 21/299 (7%)
Query: 45 QGIRIIQAAAGA-GRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNIF 102
+ I+ + ++ G+ G T+ + G+V+++G +G+ +G T+ P+L++ L+
Sbjct: 455 RSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ--KYPKLIQGPLQGKV 512
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
VV + G +A ++ +G +YT+ G+ RLG H + N L+ + N V +++ G
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-HGDSNSRNIPTLVKDISN--VGEVSCG 569
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
+ +AL+ G V+S G G GKLGHG P++IE Q + ++ V AG+
Sbjct: 570 SSHTIALS--KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK--VCAGSQS 625
Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSED 281
+ + G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D
Sbjct: 626 SLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD 683
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
+VY++G + S+G GQGN + P+ V+ L + + + ++S+ W A
Sbjct: 684 NEVYAWG---NNSMGQC----GQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 20/302 (6%)
Query: 43 SLQGI---RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
+LQG +++ + G +M ++++G+V+++G +G+ +G + P+ +E+L+
Sbjct: 4075 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG--NSDRQRRPRQIEALQ 4132
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
VVQ + G +AV++ +G+++TF G+ RLG N P + LE + Q+
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQV 4191
Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAG 219
A G + LA++ G V++ G G GKLG G+ T + P+ I+ + ++ V A G
Sbjct: 4192 ACGLNHTLAVSA--DGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKV--ACG 4247
Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 279
+ + +DG V T+G R L G + P+ + L V VA G T ++
Sbjct: 4248 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307
Query: 280 EDGDVYSFGCGESASLGHNAIADGQGNRHAN-VLTPQLVTSLKQVNERVVQISLTNSIYW 338
+GDVY++G LG H N V P LVT L+ N R + +S W
Sbjct: 4308 SNGDVYAWGSNSEGQLGLG---------HTNHVREPTLVTGLQGKNVRQISAGRCHSAAW 4358
Query: 339 NA 340
A
Sbjct: 4359 TA 4360
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 22/205 (10%)
Query: 181 VGCGLG--GKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA-WHAAVVGQDGRVCTWGW 237
+ CG G G+LG G+ D +I Q + +V + G+ H+ + + G V +WG
Sbjct: 4049 LACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 297
G YG LGHGN + + P+ ++AL + + ++ G + VV+ DG +++FG G+ L
Sbjct: 4109 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL-- 4166
Query: 298 NAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL-YAFGA 356
G GN +N P+ VT+L+ V L HT A++ G + +AFG
Sbjct: 4167 -----GLGNT-SNKKLPERVTALEGYQIGQVACGLN-------HTLAVSADGSMVWAFGD 4213
Query: 357 GDKGQLGIELVNNQTERGNPERVDI 381
GD G+LG+ N T + +P+++D+
Sbjct: 4214 GDYGKLGL---GNSTAKSSPQKIDV 4235
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 27/326 (8%)
Query: 51 QAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG- 109
Q G T +I G V A G+ S+G G V + ++ +L+ V Q
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLT--VISALQGFVVTQLVTSC 4088
Query: 110 --NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
+ + L+ G V+++ G+ +LGH P + L+ VVQ++ G+ +
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS- 4146
Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVG 227
A S +++ G G G+LG G+ +++K P + + Q VA G H V
Sbjct: 4147 --AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVS 4202
Query: 228 QDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
DG V +G G YG LG GN +S P+ + L + VA G + +++DG VY+
Sbjct: 4203 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYT 4262
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
F G+ +G + +G+ H PQ + L V V + HT AL
Sbjct: 4263 F--GQDRLIG---LPEGRARNHNR---PQQIPVLAGVIIEDVAVG-------AEHTLALA 4307
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTE 372
+G +YA+G+ +GQLG+ N+ E
Sbjct: 4308 SNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
LQG ++ +AG + +++ G++Y +G+ FG +G ++ + P LV+ + N V
Sbjct: 508 LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--V 563
Query: 104 VQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
+ + G+ T LS++GR V++F G++ +LG H + N V ++ L+ + + ++ AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-HGDTNRVYKPKVIEALQGMFIRKVCAG 622
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHG-SRTDEKHPRLIEQFQLLNLQPVVVAAGAW 221
LAL S VY+ GC G LG G S P+LIE+ + V V+ G
Sbjct: 623 SQSSLALT---STGQVYAWGC--GACLGCGSSEATALRPKLIEELAATRI--VDVSIGDS 675
Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 271
H + D V WG G G GN + PK V L+ + ++ G
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 9/235 (3%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P +LQG ++Q + G + +++ G+++ FG +G G K + P+ V +
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL--PERVTA 4182
Query: 98 LKNIFVVQAAIGNFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
L+ + Q A G T +S +G V+ F G+ +LG P + L I +
Sbjct: 4183 LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQK-IDVLCGIGI 4241
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
++A G + +AL VY+ G L G + P+ I + ++ V V
Sbjct: 4242 KKVACGTQFSVALT---KDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4298
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 271
GA H + +G V WG G LG G+ P +V L ++ G
Sbjct: 4299 --GAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSF---GEAEYGVQGTKLVTSPQL 94
P +LQG+ I + AG+ ++ ++ GQVYA+G + G +E T L P+L
Sbjct: 605 PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE----ATAL--RPKL 658
Query: 95 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGT 150
+E L +V +IG+ LS + VY +WGN++ G+ T P +P + G
Sbjct: 659 IEELAATRIVDVSIGDSHCLALSHDNEVY--AWGNNSMGQCGQGNSTGPI-TKPKKVSG- 714
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAV 178
L+ I + QI+AG + LA P V
Sbjct: 715 LDGIAIQQISAGTSHSLAWTALPRDRQV 742
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 25 GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
GK L +P L GI I + A G ++ ++ G VY FG+D G
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276
Query: 85 GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPN 140
PQ + L + + A+G T L+ G VY +WG+++ LGH N
Sbjct: 4277 RNH--NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY--AWGSNSEGQLGLGH---TN 4329
Query: 141 DVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
V L+ L+ V QI+AG C+ A P
Sbjct: 4330 HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPP 4362
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 30/315 (9%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
+ +G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
+LGH E N E +G L + ++ +A G + LAL+ + ++S G G G
Sbjct: 61 NTKGQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDRGQ---LFSWGAGSDG 114
Query: 188 KLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 245
+LG + D PRLI++ LN Q ++ V+ G WH + DG+ TWG +G LG
Sbjct: 115 QLGLMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 246 GNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 304
G E ++ P+ V++L + VA G +F +S G V+ +G + LG + D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 305 GNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
H +L Q +VV IS HT LT+SG ++ FGAG GQLG
Sbjct: 232 SPCHVKLLRTQ----------KVVYISCGEE-----HTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 365 ELVNNQTERGNPERV 379
+ +N++ NP RV
Sbjct: 277 DSMNDEV---NPRRV 288
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 26/328 (7%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P C + + + A G ++ + + G+VY G ++ G+ + +G K P+ + +
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGA 80
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
L + ++ A G + LS G+++++ G+D +LG T + V L+ L ++
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL 140
Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLLNLQPVVV 216
Q++ G + LALA ++ G G+LG G + P+ + + + L V
Sbjct: 141 QVSCGNWHCLALAADGQ---FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV-- 195
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
AAG H+ + G V WG G LG +E+ P V+ L K ++++ G+ T
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
V+++ G V++FG G LGH+++ D R L+ + V QI+
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV----------LELMGSEVTQIACGRQ- 304
Query: 337 YWNAHTFALT-ESGKLYAFGAGDKGQLG 363
HT A SG +YAFG G +GQLG
Sbjct: 305 ----HTLAFVPSSGLIYAFGCGARGQLG 328
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 14/272 (5%)
Query: 30 LGREVNGT-PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK- 87
LG E G P +L II A G ++ +SD GQ++++G S G+ G+ T+
Sbjct: 66 LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GLMTTED 123
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHP 146
V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+ P
Sbjct: 124 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
+ +LE IP+ Q+AAG + AL+ SG AV+ G G+LG D + P +
Sbjct: 184 -VRSLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPCHV--- 236
Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKA 265
+LL Q VV ++ G H AV+ + G V T+G G G LGH + E P+ V L +
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 266 IHVATG-DYTTFVVSEDGDVYSFGCGESASLG 296
+A G +T V G +Y+FGCG LG
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 30 LGREV--NGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 87
LG+E +P RSL+GI + Q AAG + +S +G V+ +G ++ G+ G+ K
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL--GLSDEK 228
Query: 88 LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 147
SP V+ L+ VV + G TAVL++ G V+TF G+ +LGH + ++V P +
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF 206
L L V QIA G + LA PS +Y+ GCG G+LG G + K P ++ +
Sbjct: 289 L-ELMGSEVTQIACGRQHTLAFV--PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGY 344
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
++ G T+ + D G VY G + G+ + K P+ V +L +V +
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90
Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
G T L+ +G+VY + +D +LG + + +L +I +VQ+A GY + L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150
Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
AL+ V+ G G+LG G ++ P+LI+ LL + + VAAG H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G LGHN+ + R L +VT QI+ HT A
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVT----------QIACGRQ-----HTSAFV 310
Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
SG++Y+FG G GQLG +N+ T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)
Query: 43 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
+L I+ + G T+ ++D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+VQ A G + + LS+ V F WG + +LG E L+ +L IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQV 195
Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
AAG + ++L L SG A++ G G+LG D P L++ L + + V +
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248
Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
G H A + ++G V T+G G YG LGH + E P+ V L +A G +T+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 308
Query: 277 VVSEDGDVYSFGCGESASLG 296
V G +YSFG G + LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
+ +G S+G+ G ++V P+ + N V G T + +G VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
+ +LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114
Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
+LG GS + PR I+ L ++Q V VA G +H+ + + V WG +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
E + ++ P+++++L + + VA G +FV++ G ++ +G + LG N +
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228
Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
+R+ P L+ SL+ ++++V I HT ALT+ G ++ FGAG GQLG
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275
Query: 366 LVNNQTERGNPERV 379
N+ + NP +V
Sbjct: 276 -HNSTSHEINPRKV 288
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 13/241 (5%)
Query: 22 ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
+ +G+ L G E P +SL I+I+Q A G ++ +S A +V+ +G++ +G+
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
G++ K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E
Sbjct: 171 LGIECQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227
Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
+ P+ LL +L + +V I G + AL + V++ G G G+LGH S + E
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283
Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
+PR + F+L+ +A G H +A V GR+ ++G G G LG G+ P V
Sbjct: 284 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Query: 258 Q 258
+
Sbjct: 342 K 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
++ G T+ + D G VY G + G+ + K P+ V +L +V A
Sbjct: 35 KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVA 90
Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
G T L+ +G+VY + +D +LG + + +L +I +VQ+A GY + L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150
Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
AL+ V+ G G+LG G ++ P+LI+ LL + + VAAG H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS--LLGIPFMQVAAGGAHSFVL 205
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G LGHN+ + R L +VT + + HT A
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ---------------HTSAFV 310
Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
SG++Y+FG G GQLG +N+ T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 17/260 (6%)
Query: 43 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
+L I+ A G T+ ++D GQVYA+G DS G+ G+QG+ + + P+ ++SL +I
Sbjct: 80 ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDI 137
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+VQ A G + + LS+ V F WG + +LG + L+ +L IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQV 195
Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
AAG + ++L L SG A++ G G+LG D P L++ L + + V +
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248
Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
G H A + ++G V T+G G YG LGH + E P+ V L VA G +T+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 308
Query: 277 VVSEDGDVYSFGCGESASLG 296
V G +YSFG G + LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 28/314 (8%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
+ +G S+G+ G ++V P+ + N V G T + +G VYT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
+ +LGH E + +P ++ L+ +V +A G + LAL VY+ G G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALN---DKGQVYAWGLDSDG 114
Query: 188 KLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
+LG GS + PR I+ L ++Q V VA G +H+ + + V WG +YG LG G
Sbjct: 115 QLGLQGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
+ + ++ P+++++L + + VA G +FV++ G ++ +G + LG N +
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228
Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
+R+ P L+ SL+ ++++V I HT ALT+ G ++ FGAG GQLG
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275
Query: 366 LVNNQTERGNPERV 379
N+ + NP +V
Sbjct: 276 -HNSTSHEINPRKV 288
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 22 ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
+ +G+ L G E P +SL I+I+Q A G ++ +S A +V+ +G++ +G+
Sbjct: 111 DSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
G+ K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E
Sbjct: 171 LGIDCQK-QTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227
Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
+ P+ LL +L + +V I G + AL + V++ G G G+LGH S + E
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283
Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
+PR + F+L+ VA G H +A V GR+ ++G G G LG G+ P V
Sbjct: 284 NPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Query: 258 Q 258
+
Sbjct: 342 K 342
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 107
R+ G T+ + D G VY G + G+ + K P+ V +L +V +
Sbjct: 35 RVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH----EKSRKKPEQVVALDAQNIVAVS 90
Query: 108 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
G T L+ +G+VY + +D +LG + + +L +I +VQ+A GY + L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 150
Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQPVVVAAGAWHAAVV 226
AL+ V+ G G+LG G+ ++ P+L++ LL + + VAAG H+ V+
Sbjct: 151 ALS---KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS--LLGIPFMQVAAGGAHSFVL 205
Query: 227 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++
Sbjct: 206 TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFT 265
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG G LGHN+ + R L +VT + + HT A
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQ---------------HTSAFV 310
Query: 347 -ESGKLYAFGAGDKGQLGIELVNNQ----TERGN 375
SG++Y+FG G GQLG +N+ T +GN
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)
Query: 43 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTSPQLVESLKNI 101
+L I+ + G T+ ++D GQVYA+G DS G+ G+ G+ + + P+ ++SL +I
Sbjct: 80 ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDI 137
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 159
+VQ A G + + LS+ V F WG + +LG T+ LL +L IP +Q+
Sbjct: 138 QIVQVACGYYHSLALSKASEV--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 195
Query: 160 AAG--YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVA 217
AAG + ++L L SG A++ G G+LG D P L++ L + + V +
Sbjct: 196 AAGGAHSFVLTL----SG-AIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYIC 248
Query: 218 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTF 276
G H A + ++G V T+G G YG LGH + E P+ V L +A G +T+
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSA 308
Query: 277 VVSEDGDVYSFGCGESASLG 296
V G +YSFG G + LG
Sbjct: 309 FVPSSGRIYSFGLGGNGQLG 328
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 28/314 (8%)
Query: 68 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 127
+ +G SFG+ G ++V P+ + N V G T + +G VYT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 128 GNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGG 187
+ +LGH E + +P ++ L+ +V ++ G + LAL + VY+ G G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQ---VYAWGLDSDG 114
Query: 188 KLGH-GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG 246
+LG GS + PR I+ L ++Q V VA G +H+ + + V WG +YG LG G
Sbjct: 115 QLGLVGSEECIRVPRNIK--SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 247 NE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQG 305
+ + ++ P+++++L + + VA G +FV++ G ++ +G + LG N +
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----DEN 228
Query: 306 NRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
+R+ P L+ SL+ ++++V I HT ALT+ G ++ FGAG GQLG
Sbjct: 229 DRYV----PNLLKSLR--SQKIVYICCGED-----HTAALTKEGGVFTFGAGGYGQLG-- 275
Query: 366 LVNNQTERGNPERV 379
N+ + NP +V
Sbjct: 276 -HNSTSHEINPRKV 288
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
Query: 22 ERNGKRNLLG-REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
+ +G+ L+G E P +SL I+I+Q A G ++ +S A +V+ +G++ +G+
Sbjct: 111 DSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
G K TSPQL++SL I +Q A G + VL+ G + F WG + +LG + E
Sbjct: 171 LGTDCKK-QTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDE 227
Query: 139 PNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK 198
+ P+ LL +L + +V I G + AL + V++ G G G+LGH S + E
Sbjct: 228 NDRYVPN-LLKSLRSQKIVYICCGEDHTAALTKEG---GVFTFGAGGYGQLGHNSTSHEI 283
Query: 199 HPRLIEQFQLLNLQPVVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
+PR + F+L+ +A G H +A V GR+ ++G G G LG G+ P V
Sbjct: 284 NPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Query: 258 Q 258
+
Sbjct: 342 K 342
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 32/300 (10%)
Query: 14 ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
I R ++ ++ RNL G+ + G Y C S +R + + + A ++LI+ G+++++G
Sbjct: 115 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWG 173
Query: 73 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
++ G+ +G TK V +P+L+E+L + +V AA G T L+ G V+ F +
Sbjct: 174 RNEKGQLGHG--DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231
Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
LG + D P P P+ ++A G + + + C+ + +YS GC G+LGH
Sbjct: 232 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGN---LYSFGCPEYGQLGHN 287
Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
S E PR + F Q+L + VVV A GA H V+
Sbjct: 288 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 347
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 137 PH-RYGCLSGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 194
Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
E L+ + +V+AA G H + G V +G + G LG GN+ ++VP Q + +
Sbjct: 195 EA---LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 250
Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 251 GQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310
Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
+ + + + N + + HT L +++++G G G+LG
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 162 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGS 220
Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 221 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 334 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAT 385
Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
QI + +FA++E G L+ +GA
Sbjct: 386 QIYAGYTC-----SFAVSEVGGLFFWGA 408
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
WG RYGCL S +V ++ A H + +++ +G ++S+G E
Sbjct: 135 WGPHRYGCL--------SGVRVRTVVSGSCAAH-------SLLITTEGKLWSWGRNEKGQ 179
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
LGH G R V P+L+ +L +E +V + + HT ALT++G ++AF
Sbjct: 180 LGH-----GDTKR---VEAPRLIEALS--HEAIVLAACGRN-----HTLALTDTGSVFAF 224
Query: 355 GAGDKGQLGIELVNNQTE 372
G GQLG+ NQT+
Sbjct: 225 GENKMGQLGL---GNQTD 239
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 32 REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
RE P + L G RI A G ++ +D + +FGE YG K T+
Sbjct: 413 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 472
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
Q V++L IF Q A+G + V++R+
Sbjct: 473 AQEVKTLDGIFSEQVAMGYSHSLVIARD 500
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 146/300 (48%), Gaps = 32/300 (10%)
Query: 14 ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
I R ++ ++ RNL G+ + G Y C + +R + + + A ++LI+ G+++++G
Sbjct: 117 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWG 175
Query: 73 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
++ G+ +G TK V +P+L+E L + +V AA G T L+ G V+ F +
Sbjct: 176 RNEKGQLGHG--DTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233
Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
LG + D P P P+ ++A G + + + C+ + +YS GC G+LGH
Sbjct: 234 LGLGNQ-TDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 289
Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQDG 230
S E PR + F Q+L + VVV A GA H V+
Sbjct: 290 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQK 349
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 350 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
PH G L + V + +G C +L G ++S G G+LGHG + PRLI
Sbjct: 139 PH-RYGCLAGVRVRTVVSGSCAAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRLI 196
Query: 204 EQFQLLNLQPVVVAA-GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
E L+ + +V AA G H + + G V +G + G LG GN+ ++VP Q + +
Sbjct: 197 EG---LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYN 252
Query: 263 VKAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
+ I +A G + ++ G++YSFGC E LGHN+ IA Q + L P+ V
Sbjct: 253 GQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 312
Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
+ + + + N + + HT L +++++G G G+LG
Sbjct: 313 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 47/268 (17%)
Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
+++ EG+++++ +LGH + VE L+ L + +V A G + LAL S
Sbjct: 164 LITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGS 222
Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
V++ G G+LG G++TD P I + N QP+ +A GA + ++ G +
Sbjct: 223 ---VFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
++G YG LGH ++ +CE VP+ V + +V V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
A G T V+ V+S+G G LGH D + P+LV
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGAS 387
Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
QI + +FA++E G L+ +GA
Sbjct: 388 QIYAGYTC-----SFAVSEVGGLFFWGA 410
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
WG RYGCL A V+ + + + +++ +G ++S+G E
Sbjct: 137 WGPHRYGCL---------------AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQ 181
Query: 295 LGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
LGH G R V P+L+ L +E +V + + HT ALTE+G ++AF
Sbjct: 182 LGH-----GDTKR---VEAPRLIEGLS--HEVIVSAACGRN-----HTLALTETGSVFAF 226
Query: 355 GAGDKGQLGIELVNNQTE 372
G GQLG+ NQT+
Sbjct: 227 GENKMGQLGL---GNQTD 241
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 32 REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
RE P + L G RI A G ++ +D + +FGE YG K T+
Sbjct: 415 RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTA 474
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
Q V++L IF Q A+G + V++R+
Sbjct: 475 AQEVKTLDGIFSEQVAMGYSHSLVIARD 502
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 36/302 (11%)
Query: 14 ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
I R ++ ++ RNL G+ + G Y C + +R + + + A ++LI+ G+++++G
Sbjct: 108 IGRKEVPKQQAAYRNL-GQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWG 166
Query: 73 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
++ G+ +G K + P+L+ESLK V AA G T L+ G VY F +
Sbjct: 167 RNDKGQLGHG--DIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQ 224
Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
LG + D P P P+ ++A G + + + C+ + +YS GC G+LGH
Sbjct: 225 LGLGNK-TDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGN---LYSFGCPEYGQLGHN 280
Query: 193 SRTDEKH--------------PRLIEQF-------QLLNLQPVVV---AAGAWHAAVVGQ 228
S D K+ R I F Q+L + VVV A G H+ ++
Sbjct: 281 S--DGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDS 338
Query: 229 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 286
RV +WG+G YG LGH + E VP++V+ + A + G +F VSE G ++
Sbjct: 339 QKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFF 398
Query: 287 FG 288
+G
Sbjct: 399 WG 400
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
PH G L + V +A+G C +L G ++S G G+LGHG P+LI
Sbjct: 130 PH-RYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 263
E + V A G H + ++G V +G + G LG GN+ ++VP Q L +
Sbjct: 188 ESLKGEVF--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQILYNG 244
Query: 264 KAI-HVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLVT 318
+ I VA G + ++ G++YSFGC E LGHN+ IA Q + L + +
Sbjct: 245 QPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIA 304
Query: 319 SLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
+ + + + N + + H+ L +++++G G G+LG
Sbjct: 305 IFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLG 354
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 115 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPS 174
+++ EG+++++ + +LGH + ++ L+ +L+ V A G + LAL S
Sbjct: 155 LITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGS 213
Query: 175 GMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
VY+ G G+LG G++TD P I L N QP+ VA GA + ++ G +
Sbjct: 214 ---VYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 233 CTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIHV 268
++G YG LGH ++ +CE + + + + +V +
Sbjct: 267 YSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDI 326
Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
A G + ++ V+S+G G LGH+ D + P+LV
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD--------EMVPRLVKLFDFPGRGAA 378
Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGA 356
QI + +FA++E G L+ +GA
Sbjct: 379 QIYAGATC-----SFAVSEMGGLFFWGA 401
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 34/132 (25%)
Query: 235 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT--TFVVSEDGDVYSFGCGES 292
WG RYGCL V+ VA+G + +++ +G ++S+G +
Sbjct: 128 WGPHRYGCL-----------------TGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK 170
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
LGH I + P+L+ SLK E V + + HT ALTE+G +Y
Sbjct: 171 GQLGHGDIK--------RIDVPKLIESLK--GEVFVHAACGRN-----HTLALTENGSVY 215
Query: 353 AFGAGDKGQLGI 364
AFG GQLG+
Sbjct: 216 AFGENKMGQLGL 227
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 32 REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
R+ P + L G ++ A G ++ +D + +FGE YG K T+
Sbjct: 406 RDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTT 465
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
Q V++L I+ Q +GN T V++R+
Sbjct: 466 AQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 32/300 (10%)
Query: 14 ILRPDIINERNGKRNLLGREVNGTPLY-CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
I R ++ ++ RNL G+ + G Y C S + + + A +++I+ G+++++G
Sbjct: 90 IGRKEVPKQQAAFRNL-GQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWG 148
Query: 73 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
++ G+ +G TK + +P+L+E L +V AA G T L+ G VYTF +
Sbjct: 149 RNDKGQLGHG--DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQ 206
Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
LG + D P P+V++A G + + + C+ + +YS GC G+LGH
Sbjct: 207 LGQGNQ-TDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGN---LYSFGCPEYGQLGHN 262
Query: 193 SRTD------------EKHPRLIEQF-------QLLNLQPVV---VAAGAWHAAVVGQDG 230
S E PR + F Q+L + VV VA GA H V+
Sbjct: 263 SDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQK 322
Query: 231 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 288
RV +WG+G YG LGH ++ E VP++V+ + A + G +F +SE G ++ +G
Sbjct: 323 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 144 PHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLI 203
PH G L ++ V + +G C +L G ++S G G+LGHG + P+LI
Sbjct: 112 PH-RYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Query: 204 EQFQLLNLQPVVVAA--GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
E + V+VAA G H + ++G V T+G + G LG GN+ + N
Sbjct: 170 EGLG----EEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA----IADGQGNRHANVLTPQLV 317
+ VA G + +V G++YSFGC E LGHN+ IA Q L P+ V
Sbjct: 226 GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV 285
Query: 318 TSLKQVNERVVQISLTNSIYWNA-----HTFALTESGKLYAFGAGDKGQLG 363
+ + + + N + + HT L +++++G G G+LG
Sbjct: 286 AIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 131/328 (39%), Gaps = 65/328 (19%)
Query: 57 GRTMLISDAGQVYAFGKDSFGEAEYG----VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
GR + G++ +G YG VQ + +V+ P SL
Sbjct: 91 GRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSL-------------- 136
Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
+++ EG+++++ + +LGH P + G E + +V A G + LAL
Sbjct: 137 --IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALT-- 191
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
VY+ G G+LG G++TD Q+ N QP+V VA GA + +V G
Sbjct: 192 -ENGTVYTFGENKLGQLGQGNQTDAVLSPATIQY---NGQPIVKVACGAEFSMIVDCKGN 247
Query: 232 VCTWGWGRYGCLGHGNE------------ECESVPKVVQ------------ALNDVKAIH 267
+ ++G YG LGH ++ +CE +P+ V + +V A
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARD 307
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
VA G T V+ V+S+G G LGH D + P+LV
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD--------EMVPRLVKLFDFPGRGA 359
Query: 328 VQISLTNSIYWNAHTFALTESGKLYAFG 355
QI +FAL+E G L+ +G
Sbjct: 360 TQIYCGYQC-----SFALSEMGGLFFWG 382
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 32 REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
RE P + L G +I A G ++ +D + +FGE YG K T+
Sbjct: 388 RESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTT 447
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSRE 119
Q V++L ++ Q +G + V++R+
Sbjct: 448 AQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 38 PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
P SL G +I + G+G +L + G+V+ +G +++ + G LV +
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
+L N V++ A G++ + VL+ +G V+ + + N ++G + N P + G L+N V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
+ IA G + ++A +G VY G G+LG GS ++ P + Q + +Q V
Sbjct: 208 MSIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
A G H V+ +G++ WG YG LG GN+ +S P V D + A H A
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 319
Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGH 297
+T+ S+ G VY +G C G+S L H
Sbjct: 320 HTSAAKSQGGHVYMWGQCRGQSVILPH 346
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G +G G+ + +P +V L + + +A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 357 GDKGQLGIELVNNQT 371
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 24 NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
NG+ L TP +LQGIR+ + A G T++++D GQ+YA+G +S+G+ G
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293
Query: 84 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
+ + +P +VE I + A +A S+ G VY WG
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKSQGGHVYM--WG 335
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 16/293 (5%)
Query: 38 PLYCRSLQGIRIIQAAAGAG-RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
P SL G +I + G+G +L + G+V+ +G +++ + G LV +
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPC-HIST 147
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
+L N V++ A G++ + VL+ +G V+ + + N ++G + N P + G L+N V
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
+ IA G + ++A +G VY G G+LG GS ++ P + Q + +Q V
Sbjct: 208 MNIACGQ--MCSMAVVDTG-EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV-- 262
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGD 272
A G H V+ +G++ WG YG LG GN+ +S P V D + A H A
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSA--- 319
Query: 273 YTTFVVSEDGDVYSFG-C-GESASLGHNAIADGQGNRHANVLTPQLVTSLKQV 323
+T+ ++ G VY +G C G+S L H+ + A TP + L V
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSV 372
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G +G G+ + +P +V L + +++A G + V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
+ N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 LGS--------SGNQPTPCRVAALQGI--RVQRVACG-----YAHTLVLTDEGQIYAWGA 283
Query: 357 GDKGQLGIELVNNQT 371
GQLG +NQ+
Sbjct: 284 NSYGQLGTGNKSNQS 298
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 24 NGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV 83
NG+ L TP +LQGIR+ + A G T++++D GQ+YA+G +S+G+ G
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGN 293
Query: 84 QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF--SWGNDARLGHHT 137
+ + +P +VE I + A +A ++ G VY + G L HHT
Sbjct: 294 KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHT 348
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP + + ++I GA +++S G+ + EY K + +++
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF----------EYDNYSMKHLRFESILQ 136
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLEN 153
K ++Q G++ + LS+ G + F+WG + +LG P+ P ++ L
Sbjct: 137 EKK---IIQITCGDYHSLALSKGGEL--FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAG 190
Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQP 213
+P+ QI+AG + +AL+ SG +YS G G+LG G + P LIE L N +
Sbjct: 191 VPLAQISAGEAHSMALSM--SG-NIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKV 245
Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY 273
VA G H+A++ QDG + T+G G++G LGH + + E P +V L + +A G +
Sbjct: 246 EFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRW 305
Query: 274 TTFV-VSEDGDVYSFGCGESASLGHNAIAD 302
T VS+ G V+SFG G+ LG+ D
Sbjct: 306 HTLAYVSDLGKVFSFGSGKDGQLGNGGTRD 335
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIEQFQLL 209
L+ ++QI G + LAL+ G +++ G L G+LG G + P+++E L
Sbjct: 135 LQEKKIIQITCGDYHSLALS---KGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH--LA 189
Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA 269
+ ++AG H+ + G + +WG G LG G+ E + P +++ L++ K VA
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA 249
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
G + ++++DG +++FG G+ LGHN+ N L P LV L V RV Q
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNST--------QNELRPCLVAEL--VGYRVTQ 299
Query: 330 ISLTNSIYWNAHTFA-LTESGKLYAFGAGDKGQLG 363
I+ W HT A +++ GK+++FG+G GQLG
Sbjct: 300 IACGR---W--HTLAYVSDLGKVFSFGSGKDGQLG 329
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP L G+ + Q +AG +M +S +G +Y++GK+ G+ G+ T+ P L+E
Sbjct: 181 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQ--LGLGHTESKDDPSLIE 238
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV 156
L N V A G +A+L+++G ++TF G +LGH++ N++ P L+ L V
Sbjct: 239 GLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELVGYRV 297
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP 200
QIA G + LA V+S G G G+LG+G D+ P
Sbjct: 298 TQIACGRWHTLAYVSDLG--KVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 14/220 (6%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
LQ +IIQ G ++ +S G+++A+G++ G+ G + T+PQ+VE L + +
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPS-TTTPQIVEHLAGVPL 193
Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGH-HTEPNDVEPHPLLGTLENIPVVQIA 160
Q + G + LS G +Y SWG + +LG HTE D +P L+ L+N V +A
Sbjct: 194 AQISAGEAHSMALSMSGNIY--SWGKNECGQLGLGHTESKD-DP-SLIEGLDNQKVEFVA 249
Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGA 220
G + AL Q G+ +++ G G G+LGH S +E P L+ +L+ + +A G
Sbjct: 250 CGGSH-SALLTQ-DGL-LFTFGAGKHGQLGHNSTQNELRPCLVA--ELVGYRVTQIACGR 304
Query: 221 WHA-AVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
WH A V G+V ++G G+ G LG+G + +P V+
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 214 VVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGD 272
+ + G +H+ + + G + WG +G LG G + + P++V+ L V ++ G+
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 273 YTTFVVSEDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
+ +S G++YS+G CG+ LGH D P L+ L N++V
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQ-LGLGHTESKDD----------PSLIEGLD--NQKVEF 247
Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
++ S H+ LT+ G L+ FGAG GQLG N+
Sbjct: 248 VACGGS-----HSALLTQDGLLFTFGAGKHGQLGHNSTQNE 283
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 38/202 (18%)
Query: 169 LACQPSGMAVYSVGCGLGGKLGH------GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWH 222
L C P +AV G G G ++ G+RT P+ I+ + N++ V GA H
Sbjct: 56 LCCSPGRLAVLERG-GAGVQVHQLLAGSGGART----PKCIKLGK--NMKIHSVDQGAEH 108
Query: 223 AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG 282
++ DG+ Y + ES+ L + K I + GDY + +S+ G
Sbjct: 109 MLILSSDGKPF-----EYDNYSMKHLRFESI------LQEKKIIQITCGDYHSLALSKGG 157
Query: 283 DVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHT 342
+++++G LG G + + TPQ+V L V + QIS AH+
Sbjct: 158 ELFAWGQNLHGQLG-------VGRKFPSTTTPQIVEHLAGVP--LAQISAGE-----AHS 203
Query: 343 FALTESGKLYAFGAGDKGQLGI 364
AL+ SG +Y++G + GQLG+
Sbjct: 204 MALSMSGNIYSWGKNECGQLGL 225
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 160/337 (47%), Gaps = 37/337 (10%)
Query: 27 RNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGT 86
R L R G+P G ++QAA+G ++L+ +V + G +S G+ G +G
Sbjct: 10 RELQRRRTAGSP-------GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGA 60
Query: 87 KLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPH 145
+ P+ +++L+ + V + G + + +GRV+ + G++ +LG + P
Sbjct: 61 QRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPK 120
Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR-TDEKHPRLIE 204
++ TL +I ++Q++ G+ + LAL+ V+S G G+LG G + P+ +
Sbjct: 121 KIM-TLNDIKIIQVSCGHYHSLALS---KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCL---GHGNEECESVPKVVQALN 261
+ + L VAAG H+ + G WG G L G + P V AL
Sbjct: 177 SLEGIPL--AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
++ ++++ GD T V+++DG V++FG S LG++ + +G PQLV +
Sbjct: 235 NLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG--------PQLV---E 283
Query: 322 QVNERVVQISLTNSIYWNAHTFALTE-SGKLYAFGAG 357
+++ V QI + HT A +G++ +FG G
Sbjct: 284 RIDGLVSQIDCG-----SYHTLAYVHTTGQVVSFGHG 315
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 18/278 (6%)
Query: 24 NGKRNLLGR---EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
+ R LGR + P ++L+ + + + G ++ + G+V+A+G S G+
Sbjct: 49 DNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 81 YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE 138
G + ++ +P+ + +L +I ++Q + G++ + LS++ +V FSWG ++ +LG E
Sbjct: 109 IG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQV--FSWGKNSHGQLGLGKE 165
Query: 139 -PNDVEPHPLLGTLENIPVVQIAAGYCYLLALA-CQPSGMAVYSVGCGLGGKLG-HGSRT 195
P+ P + +LE IP+ Q+AAG + AL+ C S + G G+L G
Sbjct: 166 FPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLCGTS----FGWGSNSAGQLALSGRNV 220
Query: 196 DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
+ + + L NL V ++ G H AV+ QDG+V T+G R G LG+ + P+
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 256 VVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 292
+V+ ++ + + + G Y T V G V SFG G S
Sbjct: 281 LVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
F WG D+R +++ G+ ++Q A+G + L L + V S G
Sbjct: 3 FCWGADSR--------ELQRRRTAGS-PGAELLQAASGERHSLLLL---TNHRVLSCGDN 50
Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
G+LG + P I+ + L + +V+ G H+ V GRV WG G G LG
Sbjct: 51 SRGQLGRRGAQRGELPEPIQALETLIVD--LVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 245 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
G +E PK + LND+K I V+ G Y + +S+D V+S+G L G
Sbjct: 109 IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL-------G 161
Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
G + +PQ V SL+ I L AH+FAL+ G + +G+ GQL
Sbjct: 162 LGKEFPSQASPQRVRSLE-------GIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA 214
Query: 364 IELVNNQTERGNPERV 379
+ N + P V
Sbjct: 215 LSGRNVPVQSNKPLSV 230
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 160
++QAA G + +L RV S G+++R LG P P+ LE + V ++
Sbjct: 25 LLQAASGERHSLLLLTNHRV--LSCGDNSRGQLGRRGAQRGELPEPI-QALETLIVDLVS 81
Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAG 219
G + LA+ C V++ G G G+LG G + P+ I L +++ + V+ G
Sbjct: 82 CGKEHSLAV-CHKG--RVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCG 136
Query: 220 AWHAAVVGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVV 278
+H+ + +D +V +WG +G LG G E ++ P+ V++L + VA G +F +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
S G SFG G S S G A++ +N P V +LK + VV IS +
Sbjct: 197 SLCGT--SFGWG-SNSAGQLALSGRNVPVQSN--KPLSVGALKNLG--VVYISCGD---- 245
Query: 339 NAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVD 380
AHT LT+ GK++ FG GQLG + ER+D
Sbjct: 246 -AHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERID 286
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 154/358 (43%), Gaps = 36/358 (10%)
Query: 23 RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRT-MLISDAGQVYAFGKDSFGEAEY 81
+NGK+ + +V+ P + +R+ +A + L ++ VY FG S E
Sbjct: 33 KNGKKPVKRAKVSSLP------KPVRVPGSAKRINKIPELPTERLNVYVFGSGSMNELGM 86
Query: 82 GVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP 139
G + +V P+L + S + VV A+G +A LS +GRVYT+ +D LG T+
Sbjct: 87 GEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD 146
Query: 140 NDVEPHPLLGT--LENIPV-VQIAAGYCYLLALACQPS-GMAVYSVGCGL--------GG 187
E + LE P V+ A + + + C + A+ GC G
Sbjct: 147 QKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDG 206
Query: 188 KLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN 247
LG+ + R E Q+ + +A G H + G+V TWG G+ LG
Sbjct: 207 VLGYS----DSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRM 262
Query: 248 EECESVPKVV-QALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
E + + Q L I V G Y +F + G VY++G + G + +G
Sbjct: 263 LERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEG- 321
Query: 307 RHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
A + P LV +L+ N + S+T + HT AL E G++ A+G D+ QLGI
Sbjct: 322 --AVITKPTLVDALEGYNVK----SITGGEH---HTLALLEDGRVLAWGRDDRHQLGI 370
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 46/320 (14%)
Query: 34 VNGTPLYCR-SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
+ GTP +L +R+ + T I+D G + +G + G ++ T+
Sbjct: 160 LEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAE 219
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT----EPNDVEPHPLL 148
L I Q A G L+ G+VYT+ G +LG + P PL
Sbjct: 220 PTQMRLPEI--CQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL- 276
Query: 149 GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-----HPRLI 203
L+NI + + AG + A+ + VY+ G + + G +E+ P L+
Sbjct: 277 -ALKNI--ISVGAGSYHSFAIDNKGR---VYAWGLNITRQCGIEVEDEEEGAVITKPTLV 330
Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--------------HGNEE 249
+ + N++ + G H + +DGRV WG LG GN
Sbjct: 331 DALEGYNVKSIT--GGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNY 388
Query: 250 CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHA 309
S P ++ L +V I V G + V+ DG VYS+G E+ + GQG+
Sbjct: 389 YLSTPTIIPGLTNV--IQVVCGTHHNLAVTSDGKVYSWGSAENYEV-------GQGDNDE 439
Query: 310 NVLTPQLVTS--LKQVNERV 327
+V P LV S +K+V RV
Sbjct: 440 DVAVPTLVRSKAIKEVAIRV 459
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 122 VYTFSWGNDARLGHHTEPNDVEPHPLLGTL---ENIPVVQIAAGYCYLLALACQPSGMAV 178
VY F G+ LG E DV P L + + + VV +A G + AL+ V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGR---V 129
Query: 179 YSVGCGLGGKLG---------HGSRTD----EKHPRLIEQFQLLNLQPVVVAAGAWHAAV 225
Y+ G LG +G + D E P +E L +L+ V A
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG-ALSHLRVTKVICSDNLTAA 188
Query: 226 VGQDGRVCTWGWGRYGC----LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED 281
+ +G C + WG + C LG+ + + + L ++ +ATG ++
Sbjct: 189 ITDNG--CCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLATGTDHIIALTTT 244
Query: 282 GDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAH 341
G VY++G G+ LG + R LTPQ + +LK + IS+ Y H
Sbjct: 245 GKVYTWGNGQQFQLGRRMLE----RRRLQGLTPQPL-ALKNI------ISVGAGSY---H 290
Query: 342 TFALTESGKLYAFGAGDKGQLGIELVNNQ 370
+FA+ G++YA+G Q GIE+ + +
Sbjct: 291 SFAIDNKGRVYAWGLNITRQCGIEVEDEE 319
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 176 MAVYSVGCGLGGKLGHGSRTDE--KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
+ VY G G +LG G + PRL + V +A G H+A + DGRV
Sbjct: 71 LNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVY 130
Query: 234 TWGWGRYGCLGH-------------GNEECESVP-KVVQALNDVKAIHVATGDYTTFVVS 279
TWG LG N+ E P KV AL+ ++ V D T ++
Sbjct: 131 TWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAIT 190
Query: 280 EDGDVYSFG---CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
++G +++G C + LG+ +D Q R A +L + Q++
Sbjct: 191 DNGCCFTWGTFRCSDGV-LGY---SDSQ-KRTAEPTQMRL--------PEICQLATGTD- 236
Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERG 374
H ALT +GK+Y +G G + QLG ++ + +G
Sbjct: 237 ----HIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 158/367 (43%), Gaps = 81/367 (22%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLKNIFVVQA 106
++QA AG T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQV 124
Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
+ G+ TA L+ +GRV F WG N+ +G EP P+ L ++PVV++A+G
Sbjct: 125 SAGDSHTAALTDDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DVPVVKVASG 180
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGH-------------------------GSRTDE 197
+L+ L +Y++GCG G+LG SR
Sbjct: 181 NDHLVMLTADGD---LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKV 256
H R + F GA+ + +G V +G Y LG G E C +
Sbjct: 238 GHVRFQDAF-----------CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL 286
Query: 257 VQALNDVKA-IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
N K+ + + G + T + +G YS G E LG G+G ++ P
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PT 339
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG----------IE 365
L++ L V+ S+ +A+T+ G+++A+G G QLG +E
Sbjct: 340 LISRLPAVSSVACGASVG---------YAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVE 390
Query: 366 LVNNQTE 372
++ Q E
Sbjct: 391 MMGKQLE 397
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
G V T G+ +LG + + L+ E+ VVQ AG + + L+ SG VY
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPED--VVQAEAGGMHTVCLS--KSGQ-VY 89
Query: 180 SVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
S GC G LG + + E P +E L + V V+AG H A + DGRV WG
Sbjct: 90 SFGCNDEGALGRDTSVEGSEMVPGKVE----LQEKVVQVSAGDSHTAALTDDGRVFLWGS 145
Query: 238 GR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
R G +G +S VP VQ DV + VA+G+ +++ DGD+Y+ GCGE
Sbjct: 146 FRDNNGVIGLLEPMKKSMVP--VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 295 LGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LG + +G R +L P+ V LK R + ++ TFA++ G +
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVM-LKSRGSR-GHVRFQDAFCGAYFTFAISHEGHV 261
Query: 352 YAFGAGDKGQLG 363
Y FG + QLG
Sbjct: 262 YGFGLSNYHQLG 273
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 125/318 (39%), Gaps = 37/318 (11%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---DDGRVFLWG 144
Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
G K + Q Q L++ V VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 243 LGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGDYTTFVVSEDGDVYS 286
LG G + E VPK V + HV G Y TF +S +G VY
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYG 263
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG LG + PQ +TS K + V S HT +
Sbjct: 264 FGLSNYHQLGTPGT--------ESCFIPQNLTSFKNSTKSWVGFS-----GGQHHTVCMD 310
Query: 347 ESGKLYAFGAGDKGQLGI 364
GK Y+ G + G+LG+
Sbjct: 311 SEGKAYSLGRAEYGRLGL 328
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
H + + G V T G G G LG G E P +V DV + G T +S+
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSK 84
Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G VYSFGC + +LG + +G ++V ++ E+VVQ+S +S
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS----- 129
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
HT ALT+ G+++ +G+ I L+ + P +V +D+
Sbjct: 130 HTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDV 172
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 25/253 (9%)
Query: 47 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLVE- 96
+ +++ A+G ++++ G +Y G G+ G QG + + P+ V
Sbjct: 172 VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVML 231
Query: 97 ----SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
S ++ A G +FT +S EG VY F N +LG + P L
Sbjct: 232 KSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKN 291
Query: 153 NIPV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLN 210
+ V + G + + C S YS+G G+LG G +EK P LI + ++
Sbjct: 292 STKSWVGFSGGQHHTV---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS 348
Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVKAIHV 268
VA GA V +DGRV WG G LG G +E V + + L + + V
Sbjct: 349 ----SVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSV 404
Query: 269 ATGDYTTFVVSED 281
++G T ++ +D
Sbjct: 405 SSGGQHTVLLVKD 417
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQ 105
+++Q +AG T ++D G+V+ +G SF + GV G + S V+ ++ VV+
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVK 176
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----------------PNDVEPHPLLG 149
A GN +L+ +G +YT G +LG E P V +L
Sbjct: 177 VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV----MLK 232
Query: 150 TLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
+ + V+ +C A G VY G +LG P+ + F+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISHEGH-VYGFGLSNYHQLGTPGTESCFIPQNLTSFKN 291
Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIH 267
V + G H + +G+ + G YG LG G E +S+P ++ L V +
Sbjct: 292 STKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSS-- 349
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLG 296
VA G + V++DG V+++G G + LG
Sbjct: 350 VACGASVGYAVTKDGRVFAWGMGTNYQLG 378
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 15/273 (5%)
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE---PHPLLGTLENI 154
+ N V+Q ++G +++ GR+ T+ + G T P VE P + LE
Sbjct: 337 MLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGAVEQMQPQFISRFLEGQ 395
Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
V I + C L C + + G G G LGHG+ D P+++E LL + V
Sbjct: 396 SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA--LLGYELV 453
Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
V+ GA H V + V +WG G G LG ++ + P+ V D +A V G
Sbjct: 454 QVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDC 513
Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH----ANVLTPQLVTSLKQVNERVVQI 330
+ ++S + + G LG + ++ + V QLV S E++V I
Sbjct: 514 SMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYI 573
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ AH+ A+TE G+ + FG+ GQLG
Sbjct: 574 DIGT-----AHSVAVTEKGQCFTFGSNQHGQLG 601
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 158/366 (43%), Gaps = 46/366 (12%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV- 95
TPL L +IQ + G + M ++ +G++ + S G E + G PQ +
Sbjct: 331 TPLRLPMLN-TEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFIS 389
Query: 96 ---ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
E + + + G+ FT L+ G + TF G++ LGH NDV ++ L
Sbjct: 390 RFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNF-NDVTQPKIVEALL 448
Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQ 212
+VQ++ G ++LA+ + V+S G G G+LG ++ P+ + Q
Sbjct: 449 GYELVQVSCGASHVLAVTNE---REVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQ 505
Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG----HGNEECESVPKV--------VQA- 259
V+ G + ++ ++ G R+ LG G EE S +V VQ+
Sbjct: 506 RVL--CGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSA 563
Query: 260 -LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT 318
LN K +++ G + V+E G ++FG + LG + R + V P V+
Sbjct: 564 PLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSH------RRSSRV--PYQVS 615
Query: 319 SLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPER 378
L+ +T + +A T A+ G++Y +G G +G+LG + + G P+
Sbjct: 616 GLQ---------GITMAACGDAFTLAIGAEGEVYTWGKGARGRLG----RKEEDFGIPKP 662
Query: 379 VDIDLS 384
V +D S
Sbjct: 663 VQLDES 668
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 125 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
FSW +R +P L I ++Q A+G + L L S VYS G
Sbjct: 3 FSWAAGSR----------KPRRLKAGTSGIELLQAASGEHHSLLLF---SNHRVYSCGDN 49
Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
G+LG + P I+ L++ +V+ G H+ V G+V WG G G LG
Sbjct: 50 SWGQLGQRRDQSTERPEPIQALNDLHVD--LVSCGKEHSVAVCHKGKVFAWGAGSEGQLG 107
Query: 245 HGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADG 303
G +E +P ++AL +K I V+ G Y + +SEDG V+S+G LG G
Sbjct: 108 IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL-----G 162
Query: 304 QGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
+ +R + PQ V SL+ I L H+FAL+ +G + +G+ GQL
Sbjct: 163 KNSRSQAI--PQKVKSLEG-------IPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 213
Query: 364 I 364
+
Sbjct: 214 L 214
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 156/318 (49%), Gaps = 30/318 (9%)
Query: 46 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
GI ++QAA+G ++L+ +VY+ G +S+G+ G + + P+ +++L ++ V
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPIQALNDLHVDL 78
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIAAGYC 164
+ G + + +G+V+ + G++ +LG E ++ P + L I ++Q++ G+
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGHY 137
Query: 165 YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQPVVVAAGAWHA 223
+ LAL+ V+S G G+LG G + + P+ ++ + + L VAAG H+
Sbjct: 138 HSLALS---EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL--AQVAAGGTHS 192
Query: 224 AVVGQDGRVCTWGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSE 280
+ G WG R G L GN+ E + P + AL ++ I+++ G T V++E
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
+G V++FG S L + + +G PQL+ + RV QI +
Sbjct: 253 EGQVFTFGGNSSGQLQPSPRSGQRG--------PQLIEG---IGGRVSQIECA-----SY 296
Query: 341 HTFA-LTESGKLYAFGAG 357
HT A + +G++ + G G
Sbjct: 297 HTIAYVYTTGQVVSLGRG 314
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 28/268 (10%)
Query: 101 IFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
I ++QAA G + +L RVY+ SWG +LG + + P P+ L ++ V
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWG---QLGQRRDQSTERPEPI-QALNDLHVD 77
Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD-EKHPRLIEQFQLLNLQPVVV 216
++ G + +A+ C V++ G G G+LG G + P I+ L ++ + V
Sbjct: 78 LVSCGKEHSVAV-CHKG--KVFAWGAGSEGQLGIGEFKEISFMPTKIKA--LAGIKIIQV 132
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVATGDYTT 275
+ G +H+ + +DG V +WG G LG G N +++P+ V++L + VA G +
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 276 FVVSEDGDVYSFGCGESASLGHNAIADGQGNR-HANVLTPQLVTSLKQVNERVVQISLTN 334
F +S G + +G S L + GN+ + P + +LK N V+ IS
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALS------GNKVKEQIYKPHSIGALK--NLSVIYISCGY 244
Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQL 362
HT LTE G+++ FG GQL
Sbjct: 245 E-----HTAVLTEEGQVFTFGGNSSGQL 267
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%), Gaps = 12/178 (6%)
Query: 32 REVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
+E++ P ++L GI+IIQ + G ++ +S+ G V+++G++S G+ G + ++
Sbjct: 112 KEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAI 170
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND-----ARLGHHTEPNDVEPHP 146
PQ V+SL+ I + Q A G + LS G +F WG++ A G+ + +PH
Sbjct: 171 PQKVKSLEGIPLAQVAAGGTHSFALSLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHS 228
Query: 147 LLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
+G L+N+ V+ I+ GY + L + V++ G G+L R+ ++ P+LIE
Sbjct: 229 -IGALKNLSVIYISCGYEHTAVLTEEGQ---VFTFGGNSSGQLQPSPRSGQRGPQLIE 282
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 15/261 (5%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P ++L + + + G ++ + G+V+A+G S G+ G + ++ P +++
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKA 123
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLEN 153
L I ++Q + G++ + LS +G V FSWG ++ LG ++ + + +LE
Sbjct: 124 LAGIKIIQVSCGHYHSLALSEDGHV--FSWGRNSEGQLGLGKNSRSQAIPQK--VKSLEG 179
Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQ 212
IP+ Q+AAG + AL+ + + G G+L G++ E+ + L NL
Sbjct: 180 IPLAQVAAGGTHSFALSLTGTS---FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS 236
Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKAIHVATG 271
+ ++ G H AV+ ++G+V T+G G L + P++++ + V I A+
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASY 296
Query: 272 DYTTFVVSEDGDVYSFGCGES 292
+V + G V S G G S
Sbjct: 297 HTIAYVYT-TGQVVSLGRGPS 316
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 276
A+G H+ ++ + RV + G +G LG ++ P+ +QALND+ V+ G +
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 277 VVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSI 336
V G V+++G G L G G P + +L + +++Q+S
Sbjct: 88 AVCHKGKVFAWGAGSEGQL-------GIGEFKEISFMPTKIKALAGI--KIIQVSCG--- 135
Query: 337 YWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERV 379
+ H+ AL+E G ++++G +GQLG L N + P++V
Sbjct: 136 --HYHSLALSEDGHVFSWGRNSEGQLG--LGKNSRSQAIPQKV 174
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P + LQG I Q + G T+ ++D GQ+YAFG D YG G V P+++E
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEP 471
Query: 98 LK-NIF----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 151
++ N F V Q + G+ VL+R VY++ G RLG +E + P + +
Sbjct: 472 MQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKA 531
Query: 152 ENIPVVQIAAGYCYLLA-----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP---RLI 203
I VQ +LL LAC + + + G + H + + + L
Sbjct: 532 LIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLA 591
Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALND 262
+Q ++ +A G H A + + GR+ T+G + G LG GN + + + L
Sbjct: 592 KQLSFYKIR--TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG 649
Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ I V+ GD T ++D ++++G G + L
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 136
++PQ ++ +K+ Q GN AV++ E +YT W N +LGH +
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVNMQGGTKLHGQLGHGDKASY 414
Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
+P VE L+ + Q++ G + + C +Y+ G G +G
Sbjct: 415 RQPKHVE------KLQGKAIRQVSCGDDFTV---CVTDEGQLYAFGSDYYGCMGVDKVAG 465
Query: 197 EKHPRLIEQFQL--LNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
P ++E QL PV V+ G H V+ ++ V +WG G YG LG +EE
Sbjct: 466 ---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P+ V + + V G TF++++ G V + G E LG N G N A
Sbjct: 523 PQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P T+ + +++ + HT A+ E G+L FG GQLG+
Sbjct: 583 P--YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 43/292 (14%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF------SWGNDARLGHHTEPNDVEPH 145
P+ VE L+ + Q + G+ FT ++ EG++Y F G D G P +EP
Sbjct: 417 PKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG----PEVLEPM 472
Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQ 205
L L N PV Q++ G +++ L VYS GCG G+LG S D P+ ++
Sbjct: 473 QLNFFLSN-PVEQVSCGDNHVVVLT---RNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------NEECESVP--- 254
+ L + V V G ++ Q G+V G + LG +E VP
Sbjct: 529 PKALII--VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTT 586
Query: 255 --KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
+ + L+ K +A G T + E G + +FGC + LG + + + N+L
Sbjct: 587 SFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLL 643
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
L ++V+++S + T A T+ ++A+G G G+L +
Sbjct: 644 GGPLG------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM 684
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 216 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
V AG H AVV + + TW G +G LGHG++ PK V+ L V+
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
GD T V+++G +Y+FG +G + +A + VL P + ++ V Q+
Sbjct: 434 GDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPE------VLEPMQLNFF--LSNPVEQV 485
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
S ++ H LT + ++Y++G G+ G+LG+ +++ + P++VD+
Sbjct: 486 SCGDN-----HVVVLTRNKEVYSWGCGEYGRLGL---DSEEDYYTPQKVDV 528
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 101
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 42 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98
Query: 102 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 158
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156
Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321
Query: 339 NAHTFALTESGKLYAFG 355
+A A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283
Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 43 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNI 101
+L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNK 205
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIA 160
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 206 VVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVA 263
Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAA 218
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 264 CGYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAAC 316
Query: 219 GAWH-AAVVGQDGRVCTWGWGR 239
+ H +A Q G V WG R
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQCR 338
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP +LQGIR+ + A G T++++D GQVYA+G +S+G+ G + + +P VE
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
I + A +A ++ G VY WG
Sbjct: 307 K-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 28/317 (8%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAG-QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNI 101
LQ IR AG +L + +++ G + G G VQ T P+ ++SL
Sbjct: 42 LQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGK 98
Query: 102 FVVQAAIGNFFTAVL-SREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQ 158
+ + G+ VL + EG V F+WG++A +LG+ T + + P + L N V++
Sbjct: 99 KIACLSYGSGPHIVLATTEGEV--FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE 156
Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA 218
+A G + L L S V++ G G++G GS ++ PR + L N V +A
Sbjct: 157 VACGSYHSLVLT---SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIAC 212
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
G V G V WG+ G LG GN + P V AL ++ VA G T V+
Sbjct: 213 GQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Query: 279 SEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYW 338
+++G VY++G L G GN+ +N P VT K +R+++I+ +S +
Sbjct: 273 TDEGQVYAWGANSYGQL-------GTGNK-SNQSYPTPVTVEK---DRIIEIAACHSTHT 321
Query: 339 NAHTFALTESGKLYAFG 355
+A A T+ G +Y +G
Sbjct: 322 SA---AKTQGGHVYMWG 335
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V++ G +LG+G+ P I L N Q + VA G++H+ V+ DG V WG+
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 238 GRYGCLGHGNEECESVPK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G +G G+ + +P+ V L + + +A G V + G+VY +G + LG
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
GN N TP V +L+ + RV +++ AHT LT+ G++YA+GA
Sbjct: 239 -------LGNS-GNQPTPCRVAALQGI--RVQRVACGY-----AHTLVLTDEGQVYAWGA 283
Query: 357 GDKGQLGIELVNNQTERGNPERVDID 382
GQLG N++ + P V ++
Sbjct: 284 NSYGQLG---TGNKSNQSYPTPVTVE 306
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 43 SLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-SLKNI 101
+L ++I+ A G+ +++++ G+V+A+G ++ G+ G + + P+ V L+N
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI--PRRVTGCLQNK 205
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIA 160
VV A G + G VY + + + +LG N +P P + L+ I V ++A
Sbjct: 206 VVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVA 263
Query: 161 AGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVAA 218
GY + L L + VY+ G G+LG G+++++ +P +E+ +++ + A
Sbjct: 264 CGYAHTLVLTDEGQ---VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIE----IAAC 316
Query: 219 GAWH-AAVVGQDGRVCTWGWGR 239
+ H +A Q G V WG R
Sbjct: 317 HSTHTSAAKTQGGHVYMWGQCR 338
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP +LQGIR+ + A G T++++D GQVYA+G +S+G+ G + + +P VE
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
I + A +A ++ G VY WG
Sbjct: 307 K-DRIIEIAACHSTHTSAAKTQGGHVYM--WG 335
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 22/274 (8%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P + LQG I Q + G T+ ++D GQ+YAFG D YG G V+ P+++E
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEP 471
Query: 98 LK-NIF----VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 151
++ N F V Q + G+ VL+R VY++ G RLG +E + P + +
Sbjct: 472 MQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKA 531
Query: 152 ENIPVVQIAAGYCYLLA-----LACQPSGMAVYSVGCGLGGKLGHGSRTDEKHP---RLI 203
I VQ +LL LAC + + + G + H + + + L
Sbjct: 532 LIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLA 591
Query: 204 EQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALND 262
+Q ++ +A G H A + + GR+ T+G + G LG GN + + + L
Sbjct: 592 KQLSFYKIR--TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGG 649
Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
+ I V+ GD T ++D ++++G G + L
Sbjct: 650 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 32/291 (10%)
Query: 90 TSPQLVESLKN-IFVVQAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 136
++PQ ++ +K+ Q GN AV++ E +YT W N +LGH +
Sbjct: 357 STPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYT--WVNMQGGTKLHGQLGHGDKASY 414
Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD 196
+P VE L+ + Q++ G + + C +Y+ G G +G +
Sbjct: 415 RQPKHVE------KLQGKAIHQVSCGDDFTV---CVTDEGQLYAFGSDYYGCMGVDKVSG 465
Query: 197 EKHPRLIEQFQL--LNLQPV-VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESV 253
P ++E QL PV V+ G H V+ ++ V +WG G YG LG +EE
Sbjct: 466 ---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 254 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLT 313
P+ V + + V G TF++++ G V + G E LG N G N A
Sbjct: 523 PQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 314 PQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
P T+ + +++ + HT A+ E G+L FG GQLG+
Sbjct: 583 P--YTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV 631
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 35/288 (12%)
Query: 92 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG--HHTEPNDVEPHPLLG 149
P+ VE L+ + Q + G+ FT ++ EG++Y F +G + P +EP L
Sbjct: 417 PKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNF 476
Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
L N PV Q++ G +++ L VYS GCG G+LG S D P+ ++ + L
Sbjct: 477 FLSN-PVEQVSCGDNHVVVLT---RNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL 532
Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG--------NEECESVP-----KV 256
+ V V G ++ Q G+V G + LG +E VP +
Sbjct: 533 II--VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTL 590
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
+ L+ K +A G T + E G + +FGC + LG + + + N+L L
Sbjct: 591 AKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG---VGNYKKRLGINLLGGPL 647
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
++V+++S + T A T+ ++A+G G G+L +
Sbjct: 648 G------GKQVIRVSCGDEF-----TIAATDDNHIFAWGNGGNGRLAM 684
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 23/172 (13%)
Query: 216 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VA 269
V AG H AVV + + TW G +G LGHG++ PK V+ L KAIH V+
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG-KAIHQVS 432
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQ 329
GD T V+++G +Y+FG +G + ++ + VL P + ++ V Q
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPE------VLEPMQLNFF--LSNPVEQ 484
Query: 330 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
+S ++ H LT + ++Y++G G+ G+LG+ +++ + P+RVD+
Sbjct: 485 VSCGDN-----HVVVLTRNKEVYSWGCGEYGRLGL---DSEEDYYTPQRVDV 528
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 145/331 (43%), Gaps = 38/331 (11%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
I+QAAAG T+ + +G +Y FG + G P VE + VVQ +
Sbjct: 75 IVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEK--VVQVSA 132
Query: 109 GNFFTAVLSREGRVYTF-SWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
G+ TA L+ +GRV+ F S+ ++ + EP P+ + N PV++IA+G +L+
Sbjct: 133 GDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI-NTPVIKIASGNDHLV 191
Query: 168 ALACQPSGMAVYSVGCGLGGKLGHGSR--TDEKHPRLIEQF---QLLNLQPV-------- 214
L +Y+ GCG G+LG T+ + +E+ Q ++L+
Sbjct: 192 LLTVDGD---LYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQ 248
Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL-NDVKA-IHVATGD 272
V GA+ V Q+G V +G Y LG N + P+ + + N K+ I + G
Sbjct: 249 DVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQ 308
Query: 273 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISL 332
+ T V +G YS G E LG A+ Q P + L ++N S+
Sbjct: 309 HHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSE-------PTPIPDLPKINSVASGASV 361
Query: 333 TNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
++A++ G ++A+G G QLG
Sbjct: 362 ---------SYAVSTDGCVFAWGMGTNLQLG 383
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 127/327 (38%), Gaps = 40/327 (12%)
Query: 66 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
GQV G+ G+ G + P LV ++I VQAA G T L G +YTF
Sbjct: 41 GQVLTLGQGDVGQLGLG-EDIMERKKPALVTLTEDI--VQAAAGGMHTVCLGASGSIYTF 97
Query: 126 SWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIAAGYCYLLALACQPSGMAVYSVGCG 184
++ LG T E P G +E VVQ++AG + AL V+ G
Sbjct: 98 GCNDEGALGRDTSEEGSEMQP--GKVELAEKVVQVSAGDSHTAALT---EDGRVFVFGSF 152
Query: 185 LGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
G K + Q Q +N + +A+G H ++ DG + T G G G LG
Sbjct: 153 RDNNGVIGLLEPMKKSMVPVQVQ-INTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG 211
Query: 245 HGNEECES-----------VPKVV----QALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
E + VP+ + + V V G Y TF VS++G VY FG
Sbjct: 212 RVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGL 271
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG N A PQ +TS K + + S HT + G
Sbjct: 272 SNYHQLGTK-------NTQA-CYAPQNLTSFKNSTKSWIGFS-----GGQHHTVCVDSEG 318
Query: 350 KLYAFGAGDKGQLGIELVNNQTERGNP 376
K Y+ G + G+LG L N E+ P
Sbjct: 319 KAYSLGRAEYGRLG--LGENAEEQSEP 343
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 33/301 (10%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQ 105
+++Q +AG T +++ G+V+ FG SF + GV G + S V+ N V++
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFG--SFRDNN-GVIGLLEPMKKSMVPVQVQINTPVIK 182
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI----AA 161
A GN +L+ +G +YT G +LG P LE + V Q A
Sbjct: 183 IASGNDHLVLLTVDGDLYTSGCGEQGQLGR--VPERFTNRGGRKGLERLLVPQCIHLKAK 240
Query: 162 G---------YC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
G +C A G VY G +LG + P+ + F+
Sbjct: 241 GSGRVHFQDVFCGAYFTFAVSQEGH-VYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTK 299
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHG-NEECESVPKVVQALNDVKAIHVAT 270
+ + G H V +G+ + G YG LG G N E +S P + L + + VA+
Sbjct: 300 SWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINS--VAS 357
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G ++ VS DG V+++G G + LG D V +P+ +T + V+ +
Sbjct: 358 GASVSYAVSTDGCVFAWGMGTNLQLGTGEEED--------VWSPEQMTGKHLEDREVLSV 409
Query: 331 S 331
S
Sbjct: 410 S 410
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 102/248 (41%), Gaps = 26/248 (10%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLVESLK 99
+I+ A+G +L++ G +Y G G+ G +G + + PQ + LK
Sbjct: 180 VIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH-LK 238
Query: 100 -----NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
+ G +FT +S+EG VY F N +LG P L +
Sbjct: 239 AKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNST 298
Query: 155 PV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEK-HPRLIEQFQLLNLQ 212
+ + G + + C S YS+G G+LG G +E+ P I +N
Sbjct: 299 KSWIGFSGGQHHTV---CVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKIN-- 353
Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVAT 270
VA+GA + V DG V WG G LG G EE P+ + + L D + + V++
Sbjct: 354 --SVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSS 411
Query: 271 GDYTTFVV 278
G T ++
Sbjct: 412 GGQHTVLL 419
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 25/303 (8%)
Query: 56 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
A + ++D +V+ FG + G + LV P+ +E L + + G+ +
Sbjct: 31 ASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEGLCGKKIKSLSYGSGPHVL 88
Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
LS E V ++WG++ ++LG+ T + P + L VV++A G + +ALA
Sbjct: 89 LSTEDGV-VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
V++ G G++G GS ++ PR + L+++ VV +A G + V +G V
Sbjct: 148 E---VFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
WG+ G LG GN + P V AL+ V + G T ++++G +Y++G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
L G GN++ N+L+P + K ERVV+I+ +S + +A A T+ G +Y
Sbjct: 263 GQL-------GTGNKN-NLLSPAHIMVEK---ERVVEIAACHSAHTSA---AKTQGGHVY 308
Query: 353 AFG 355
+G
Sbjct: 309 MWG 311
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 24/281 (8%)
Query: 91 SPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT 150
SPQ + S++ V + + E V+ ++ N LG + + P L G
Sbjct: 14 SPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSN--CLGTGDNQSTLVPKKLEGL 71
Query: 151 L-ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
+ I + +G LL+ VY+ G +LG+G+ P + LL
Sbjct: 72 CGKKIKSLSYGSGPHVLLS----TEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLL 126
Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHV 268
Q V VA G+ H+ + DG V WG+ G +G G+ + P KV L+ + + +
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGI 186
Query: 269 ATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
A G ++ V ++G+VY +G + LG GN + N LTP V +L V
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLG-------LGN-NGNQLTPVRVAALHSV----- 233
Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
+ + AHT ALT+ G LYA+GA GQLG NN
Sbjct: 234 --CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNN 272
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 41 CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 100
C +L ++++ A G+ +M ++ G+V+A+G ++ G+ G + +P+ V + +
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTPRKVTNCLH 179
Query: 101 I-FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 159
I VV A G + + G VY + + + +LG N + P + L ++ V QI
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQI 238
Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQFQLLNLQPVVVA 217
GY + LAL G+ +Y+ G G+LG G++ + P ++E+ +++ +
Sbjct: 239 VCGYAHTLALT--DEGL-LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVE---IAAC 292
Query: 218 AGAWHAAVVGQDGRVCTWGWGR 239
A +A Q G V WG R
Sbjct: 293 HSAHTSAAKTQGGHVYMWGQCR 314
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V+ G LG G P+ +E ++ + +G H + +DG V WG
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGH 101
Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
Y LG+G P +V L + + VA G + + ++ DG+V+++G +G
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
+ A N TP+ VT+ + +RVV I+ + + A+ ++G++Y +G
Sbjct: 162 SGSTA--------NQPTPRKVTNCLHI-KRVVGIACGQT-----SSMAVLDNGEVYGWGY 207
Query: 357 GDKGQLGIELVNNQTERGNPERV 379
GQLG+ N + P RV
Sbjct: 208 NGNGQLGL---GNNGNQLTPVRV 227
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 206 FQLLNLQPV-------VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 258
F LL+ Q + V A A V + V +G CLG G+ + VPK ++
Sbjct: 10 FTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLE 69
Query: 259 AL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQ 315
L +K++ +G + + +EDG VY++G HN + G G + + Q
Sbjct: 70 GLCGKKIKSLSYGSGPHV-LLSTEDGVVYAWG--------HNGYSQLGNGTTNQGIAPVQ 120
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
+ T+L + ++VV+++ + H+ AL G+++A+G + GQ+G NQ
Sbjct: 121 VCTNL--LIKQVVEVACGSH-----HSMALAADGEVFAWGYNNCGQVGSGSTANQ 168
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP+ +L + + Q G T+ ++D G +YA+G +++G+ G + L + +VE
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
+ + + A +A ++ G VY WG
Sbjct: 283 K-ERVVEIAACHSAHTSAAKTQGGHVYM--WG 311
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 51/338 (15%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLKNIFVVQA 106
++QA AG T+ ++ +GQVY+FG + G + V+G+++V P VE + VVQ
Sbjct: 69 VVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQV 124
Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
+ G+ TA L+ +GRV F WG N+ +G EP P+ L ++PVV++A+G
Sbjct: 125 SAGDSHTAALTEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DMPVVKVASG 180
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGH--------GSRTDEKHPRLIEQFQLLN---- 210
+L+ L +Y++GCG G+LG G R + L+ + LL
Sbjct: 181 NDHLVMLTTDGD---LYTLGCGEQGQLGRVPELFANRGGRQGLER-LLVPKCVLLKSRGS 236
Query: 211 ---LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA- 265
++ GA+ + ++G V +G Y LG G C + N K+
Sbjct: 237 RGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSW 296
Query: 266 IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNE 325
+ + G + T + +G YS G E LG G+G ++ P L++ L V+
Sbjct: 297 VGFSGGQHHTICMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PTLISRLPVVSS 349
Query: 326 RVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
S+ +A+++ G+++A+G G QLG
Sbjct: 350 VACGASVG---------YAVSKDGRVFAWGMGTNYQLG 378
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
G V T G+ +LG + + L+ L++ VVQ AG + + C VY
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTV---CLNQSGQVY 89
Query: 180 SVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
S GC G LG + + E P +E L + V V+AG H A + +DGRV WG
Sbjct: 90 SFGCNDEGALGRDTSVEGSEMVPGKVE----LQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 238 GR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
R G +G +S VP VQ D+ + VA+G+ +++ DGD+Y+ GCGE
Sbjct: 146 FRDNNGVIGLLEPMKKSMVP--VQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQ 203
Query: 295 LGH-NAIADGQGNRHA--NVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LG + +G R +L P+ V LK R ++ ++ TFA++ G +
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVL-LKSRGSR-GRVRFQDAFCGAYLTFAISREGHV 261
Query: 352 YAFGAGDKGQLG 363
Y FG + QLG
Sbjct: 262 YGFGLSNYHQLG 273
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 127/318 (39%), Gaps = 37/318 (11%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV L++ VVQA G T L++ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLNQSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---EDGRVFLWG 144
Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
G K + Q Q L++ V VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQ 203
Query: 243 LGH---------GNEECES--VPKVVQ-----ALNDVKAIHVATGDYTTFVVSEDGDVYS 286
LG G + E VPK V + V+ G Y TF +S +G VY
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYG 263
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG LG A+ PQ +TS K + V S HT +
Sbjct: 264 FGLSNYHQLGTPGT--------ASCFIPQNLTSFKNSTKSWVGFS-----GGQHHTICMD 310
Query: 347 ESGKLYAFGAGDKGQLGI 364
GK Y+ G + G+LG+
Sbjct: 311 SEGKAYSLGRAEYGRLGL 328
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 222 HAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSE 280
H + + G V T G G G LG G E P +V L DV + G T +++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLNQ 84
Query: 281 DGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNA 340
G VYSFGC + +LG + +G ++V ++ E+VVQ+S +S
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS----- 129
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDIDL 383
HT ALTE G+++ +G+ I L+ + P +V +D+
Sbjct: 130 HTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDM 172
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 105/253 (41%), Gaps = 29/253 (11%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLV---- 95
+++ A+G ++++ G +Y G G+ G QG + + P+ V
Sbjct: 174 VVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKS 233
Query: 96 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
S + A G + T +SREG VY F N +LG + P L +
Sbjct: 234 RGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNST 293
Query: 155 PV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQ 212
V + G + + C S YS+G G+LG G +EK P LI +
Sbjct: 294 KSWVGFSGGQHHTI---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL------ 344
Query: 213 PVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHV 268
PVV VA GA V +DGRV WG G LG G +E P + + L + + V
Sbjct: 345 PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 269 ATGDYTTFVVSED 281
++G T ++ +D
Sbjct: 405 SSGGQHTVLLVKD 417
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 39/301 (12%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQ 105
+++Q +AG T +++ G+V+ +G SF + GV G + S V+ ++ VV+
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDMPVVK 176
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----------------PNDVEPHPLLG 149
A GN +L+ +G +YT G +LG E P V LL
Sbjct: 177 VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCV----LLK 232
Query: 150 TLENIPVVQIAAGYC-YLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQL 208
+ + V+ +C L A G VY G +LG P+ + F+
Sbjct: 233 SRGSRGRVRFQDAFCGAYLTFAISREGH-VYGFGLSNYHQLGTPGTASCFIPQNLTSFKN 291
Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIH 267
V + G H + +G+ + G YG LG G E +S+P ++ L V +
Sbjct: 292 STKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-- 349
Query: 268 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERV 327
VA G + VS+DG V+++G G + LG D +P +T KQ+ RV
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED--------AWSPVEMTG-KQLENRV 400
Query: 328 V 328
V
Sbjct: 401 V 401
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 11/217 (5%)
Query: 17 PDIINERNGKRNLLGREV-NGTPLYCRSLQG-IRIIQAAAGAGRTMLISDAGQVYAFGKD 74
P++ R G++ L V L R +G +R A GA T IS G VY FG
Sbjct: 208 PELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLS 267
Query: 75 SFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDAR 132
++ + G GT PQ + S KN V + G T + EG+ Y+ R
Sbjct: 268 NY--HQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGR 325
Query: 133 LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
LG + L+ L + V A Y ++ + V++ G G +LG G
Sbjct: 326 LGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGR-----VFAWGMGTNYQLGTG 380
Query: 193 SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
D P + QL N + V++G H ++ +D
Sbjct: 381 QDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 47 IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 106
I+I++ + G R+ +I+D G ++ FG+ G G Q + ++P+LV+SL+ F++
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 107 AIGNFFTAVLSREGRVYTFSWGNDARLG------HHTEPNDVEPHPLLGTLENIP--VVQ 158
+ G + VL+ +G V++F + +LG T P ++ + P +++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG--SRTDEKHPRLIEQFQLL--NLQPV 214
++AG + +A++ Y+ G G LG + D P LI ++ N++ +
Sbjct: 458 VSAGGYHSIAIS---DNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 274
V++G H + DG + +WG LG ++E + PK
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK------------------K 556
Query: 275 TFVVSEDGDVYSFGCGE 291
F+ S+D F CGE
Sbjct: 557 CFINSKDSKPLLFTCGE 573
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 67/325 (20%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHPLLGTLENIPVV 157
+V + G ++ ++ +G +YTF G +LGH ++ P VE T ++ VV
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVE---FFQTKPSLRVV 246
Query: 158 QIAAGYCYLLALA-CQPSGMAVYSVG----CGLGGKLGHGSRTDEKH-PRLIE------- 204
IA G + LAL C VYS G C LG LG+GS + P+LI
Sbjct: 247 SIANGGKHSLALTICG----KVYSWGGNDSCQLG--LGNGSSSSYYSLPQLINFNISYNN 300
Query: 205 -------------------------------QFQLLNLQPVVVAAGAWHAAVVGQDGRVC 233
++ V ++ G +AV+ G +
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 234 TWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
T+G G +G LG G + +S PK+VQ+L I +++G + V++ G V+SFG +
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRND 420
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LG ++ Q + Q+ ++ I++ H+ A++++
Sbjct: 421 QGQLGIGCFSNQQ------TIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDT 474
Query: 352 YAFGAGDKGQLGIELVNNQTERGNP 376
YA+G D G LG ++ Q +R P
Sbjct: 475 YAWGRSDYGVLGTS-IDVQGDRNLP 498
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 31/232 (13%)
Query: 101 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQI 159
I +V+ + G +AV++ +G ++TF G+ RLG + ++ P L+ +L+ ++ +
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 160 AAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLN------LQ 212
++G + L L + G+ V+S G G+LG G ++++ P+ I+ FQ +
Sbjct: 398 SSGGGHSLVLTNK--GL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPIN 454
Query: 213 PVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-----HGNEECESVPKVVQA----LNDV 263
+ V+AG +H+ + + WG YG LG G+ ++P ++ + +++V
Sbjct: 455 IIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDR---NLPVLINSNSVVVDNV 511
Query: 264 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
K I V++G +S DG +YS+GC LG + N LTP+
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKS--------DENQLTPK 555
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 42/195 (21%)
Query: 207 QLLNLQPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV---QALND 262
++ N Q +V ++ GA H++ + G + T+G G G LGHGN E S PK+V Q
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPS 242
Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVT---- 318
++ + +A G + ++ G VYS+G +S LG G G+ + PQL+
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGL-----GNGSSSSYYSLPQLINFNIS 297
Query: 319 -----------------------------SLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ + +I + + +T+ G
Sbjct: 298 YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKG 357
Query: 350 KLYAFGAGDKGQLGI 364
L+ FG GD G+LG+
Sbjct: 358 LLFTFGRGDHGRLGL 372
Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 25 GKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
G+++LL + TP +SLQG II ++G G ++++++ G V++FG++ G+ G
Sbjct: 373 GEQSLL---MQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCF 429
Query: 85 GTKLVTSPQLVESLKN-------IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 137
+ Q+ + I +++ + G + + +S Y + + LG
Sbjct: 430 SNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSI 489
Query: 138 EPNDVEPHPLL-----GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG 192
+ P+L ++N+ + +++G+ + +A++ S +YS GC G +LG
Sbjct: 490 DVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGS---LYSWGCNAGQRLGFK 546
Query: 193 SRTDEKHPR 201
S ++ P+
Sbjct: 547 SDENQLTPK 555
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 178 VYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTW 235
+++ G G G+LG G ++ + P+L++ Q + + +++G H+ V+ G V ++
Sbjct: 359 LFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFI--IDMSSGGGHSLVLTNKGLVFSF 416
Query: 236 GWGRYGCLGHGN-EECESVPKVVQALND--------VKAIHVATGDYTTFVVSEDGDVYS 286
G G LG G +++PK +Q + I V+ G Y + +S++ D Y+
Sbjct: 417 GRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYA 476
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
+G + LG + D QG+R+ P L+ S V + V I +++ H A++
Sbjct: 477 WGRSDYGVLGTSI--DVQGDRN----LPVLINSNSVVVDNVKFIDVSSGF---QHNVAMS 527
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQ 370
G LY++G +LG + NQ
Sbjct: 528 IDGSLYSWGCNAGQRLGFKSDENQ 551
Score = 39.3 bits (90), Expect = 0.047, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVV 104
+I+ + GA + I+D G +Y FG G+ +G + +SP+LVE + ++ VV
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHG--NLESYSSPKLVEFFQTKPSLRVV 246
Query: 105 QAAIGNFFTAVLSREGRVYTFSWGNDARLG 134
A G + L+ G+VY++ + +LG
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLG 276
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 47/367 (12%)
Query: 36 GTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ-- 93
GTPL L ++Q AAG + ++ +G++ + G A G V PQ
Sbjct: 322 GTPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQ 379
Query: 94 ----LVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
+E + + A G+FFTA L+ G + TF G++ LGH + D+ ++
Sbjct: 380 FISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVE 438
Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLL 209
L +VQ+A G ++LAL+ + +++ G G G+LG G+R P+ +
Sbjct: 439 ALLGYEMVQVACGASHVLALSTE---RELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQ 495
Query: 210 NLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG--HGNEECESVP--KVVQA------ 259
Q VV G + ++ G+ G R+ LG H + E VP +V +A
Sbjct: 496 EAQRVV--CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLL 553
Query: 260 ----LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQ 315
L+ + + G + V+ GD Y+FG + LG N +G+R P
Sbjct: 554 GSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNT---RRGSR-----APC 605
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
V L+ + +V +A T A+ ++Y++G G +G+LG + G
Sbjct: 606 KVQGLEGIKMAMVACG-------DAFTVAIGAESEVYSWGKGARGRLG----RRDEDAGL 654
Query: 376 PERVDID 382
P V +D
Sbjct: 655 PRPVQLD 661
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
VY+ G LGHGS+ + HP L++ F + V +H+ + Q G+V T G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G G LGHG+E+ VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 21/274 (7%)
Query: 35 NGTPLYCRSLQGIRIIQAAAGAGRTMLI---SDAGQVYAFGKDSFGEAEYGVQGTKLVTS 91
+G LY + +G+ + T ++ +D VY +G ++ +G Q +K
Sbjct: 108 HGVSLYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSK--HH 165
Query: 92 PQLVE--SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 149
P+LV+ S I++ Q + F + LS++G+VYT G RLGH E + P L+
Sbjct: 166 PELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPR-LVE 224
Query: 150 TLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQL 208
L Q+AA + + L VY+ G + +LG + PR I+ L
Sbjct: 225 GLNGHNCSQVAAAKDHTVVLT---EDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYL 281
Query: 209 LNLQPVVVAAGAWHAAVVGQDGRVCTWGW--GRYGCLGHGN-EECESVPKVVQALN--DV 263
+ VAAG +H + ++ V T G G+ GCL N E+C + P+ V AL+ D+
Sbjct: 282 KGRTIIGVAAGRFHTVLWTREA-VYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDI 340
Query: 264 KAIHVATGDYTTFVVSEDGDVY---SFGCGESAS 294
VA D T V+ GD+Y + C + AS
Sbjct: 341 ALSLVAASDGATVCVTTRGDIYLLADYQCKKMAS 374
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 232 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFVVSEDGDVYSFGC 289
V TWG LGHG++ + P++V + + V + + +S+ G VY+ G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G LGH D Q L P+LV L N V + HT LTE G
Sbjct: 204 GPGGRLGH---GDEQ-----TCLVPRLVEGLNGHNCSQVAAA-------KDHTVVLTEDG 248
Query: 350 KLYAFGAGDKGQLGI 364
+Y FG QLGI
Sbjct: 249 CVYTFGLNIFHQLGI 263
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV---SEDGDVYSFGC 289
C W ++G V +Q + A+ + D T VV ++ DVY++G
Sbjct: 101 CVWSLLKHG-----------VSLYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGD 149
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ +LGH + Q ++H P+LV + + Q+ L H+ L++ G
Sbjct: 150 NTNFTLGHGS----QNSKHH----PELVDLFSRSGIYIKQVVLC-----KFHSVFLSQKG 196
Query: 350 KLYAFGAGDKGQLG 363
++Y G G G+LG
Sbjct: 197 QVYTCGHGPGGRLG 210
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 69/347 (19%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVESLKNIFVVQA 106
++QA AG T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQV 124
Query: 107 AIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAG 162
+ G+ TA L+ +GRV F WG N+ +G EP P+ L + PVV++A+G
Sbjct: 125 SAGDSHTAALTEDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-DAPVVKVASG 180
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQF----------QLLNLQ 212
+L+ L +Y++GCG G+LG R+ E F +LL +
Sbjct: 181 NDHLVMLTNDGD---LYTLGCGEQGQLG----------RVPELFANRGGRQGLGRLLVPR 227
Query: 213 PVVVAA--------------GAWHAAVVGQDGRVCTWGWGRYGCLGH-GNEECESVPKVV 257
V++ + GA+ + ++G V +G Y LG G C +
Sbjct: 228 CVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLT 287
Query: 258 QALNDVKA-IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQL 316
N K+ + + G + T + +G YS G E LG G+G ++ P L
Sbjct: 288 SFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGL-----GEGAEEKSI--PTL 340
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
++ L V+ S+ +A+++ G+++A+G G QLG
Sbjct: 341 ISRLPVVSSVACGASVG---------YAVSKDGRVFAWGMGTNYQLG 378
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 120 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
G V T G+ +LG + + L+ L++ VVQ AG + + L+ SG VY
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD--VVQAEAGGMHTVCLS--QSGQ-VY 89
Query: 180 SVGCGLGGKLGHGSRTD--EKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
S GC G LG + + E P +E L + V V+AG H A + +DGRV WG
Sbjct: 90 SFGCNDEGALGRDTSVEGSEMVPGKVE----LQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 238 GR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 294
R G +G +S VP VQ D + VA+G+ +++ DGD+Y+ GCGE
Sbjct: 146 FRDNNGVIGLLEPMKKSMVP--VQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQ 203
Query: 295 LGH-NAIADGQGNRH--ANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LG + +G R +L P+ V LK R ++ ++ TFA++ G +
Sbjct: 204 LGRVPELFANRGGRQGLGRLLVPRCVL-LKSRGTR-GRVRFQDAFCGAYFTFAISREGHV 261
Query: 352 YAFGAGDKGQLG 363
Y FG + QLG
Sbjct: 262 YGFGLSNYHQLG 273
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 125/318 (39%), Gaps = 37/318 (11%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 122
++ G V G+ G+ G + P LV L++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 123 YTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG 182
Y+F ++ LG T E P L+ VVQ++AG + AL V+ G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQE-KVVQVSAGDSHTAALT---EDGRVFLWG 144
Query: 183 CGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGC 242
G K + Q Q L+ V VA+G H ++ DG + T G G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQ 203
Query: 243 LGHGNEECES-----------VPKVV-----QALNDVKAIHVATGDYTTFVVSEDGDVYS 286
LG E + VP+ V V+ G Y TF +S +G VY
Sbjct: 204 LGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYG 263
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FG LG G G + PQ +TS K + V S HT +
Sbjct: 264 FGLSNYHQLG----TPGTG----SCFIPQNLTSFKNSTKSWVGFS-----GGQHHTVCMD 310
Query: 347 ESGKLYAFGAGDKGQLGI 364
GK Y+ G + G+LG+
Sbjct: 311 SEGKAYSLGRAEYGRLGL 328
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 228 QDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 286
+ G V T G G G LG G E P +V L DV + G T +S+ G VYS
Sbjct: 33 EPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQSGQVYS 90
Query: 287 FGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALT 346
FGC + +LG + +G ++V ++ E+VVQ+S +S HT ALT
Sbjct: 91 FGCNDEGALGRDTSVEGS----------EMVPGKVELQEKVVQVSAGDS-----HTAALT 135
Query: 347 ESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 382
E G+++ +G+ I L+ + P +V +D
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD 171
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEA---------EYGVQGTKLVTSPQLV---- 95
+++ A+G +++++ G +Y G G+ G QG + P+ V
Sbjct: 174 VVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKS 233
Query: 96 -ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 154
+ + A G +FT +SREG VY F N +LG + P L +
Sbjct: 234 RGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 155 PV-VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH-PRLIEQFQLLNLQ 212
V + G + + C S YS+G G+LG G +EK P LI +
Sbjct: 294 KSWVGFSGGQHHTV---CMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL------ 344
Query: 213 PVV--VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHV 268
PVV VA GA V +DGRV WG G LG G +E P + + L + + V
Sbjct: 345 PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 269 ATGDYTTFVVSED 281
++G T ++ +D
Sbjct: 405 SSGGQHTVLLVKD 417
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 35/299 (11%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQG--TKLVTSPQLVESLKNIFVVQ 105
+++Q +AG T +++ G+V+ +G SF + GV G + S V+ + VV+
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDAPVVK 176
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-----------PNDVEPHPLL----GT 150
A GN +L+ +G +YT G +LG E + P +L GT
Sbjct: 177 VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGT 236
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
+ G + A++ + VY G +LG P+ + F+
Sbjct: 237 RGRVRFQDAFCGAYFTFAISREGH---VYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNST 293
Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVA 269
V + G H + +G+ + G YG LG G E +S+P ++ L V + VA
Sbjct: 294 KSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS--VA 351
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVV 328
G + VS+DG V+++G G + LG D +P +T KQ+ RVV
Sbjct: 352 CGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED--------AWSPVEMTG-KQLENRVV 401
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 13/218 (5%)
Query: 17 PDIINERNGKRNLLGREV--NGTPLYCRSLQG-IRIIQAAAGAGRTMLISDAGQVYAFGK 73
P++ R G++ L GR + L R +G +R A GA T IS G VY FG
Sbjct: 208 PELFANRGGRQGL-GRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGL 266
Query: 74 DSFGEAEYGVQGTKLVTSPQLVESLKNIFV--VQAAIGNFFTAVLSREGRVYTFSWGNDA 131
++ + G GT PQ + S KN V + G T + EG+ Y+
Sbjct: 267 SNY--HQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYG 324
Query: 132 RLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGH 191
RLG + L+ L + V A Y ++ + V++ G G +LG
Sbjct: 325 RLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGR-----VFAWGMGTNYQLGT 379
Query: 192 GSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQD 229
G D P + QL N + V++G H ++ +D
Sbjct: 380 GQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 34 VNGTPLYCRSLQG-IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
V P +C+ L +R+ Q GA +L+ AGQV+++G G+ +G +L P
Sbjct: 147 VTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAEL--EP 204
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEP---NDVEPHPLL- 148
+L+E+L+ + + + A G + + LS G +Y + W +L T N E
Sbjct: 205 RLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATE 264
Query: 149 ----GTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIE 204
G E + V A + +A QP P L++
Sbjct: 265 LNEDGLKEELAVADAGAPAHF---IAIQP-------------------------FPALLD 296
Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--ND 262
L V+ + G+ H AVV + G + TWGWG+YG LGH + P V+
Sbjct: 297 --LPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQ 354
Query: 263 VKAIHVATGDYTTFVVSEDGD 283
++ V G + T+V + + D
Sbjct: 355 LEVRAVTCGPWNTYVYAMERD 375
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
GA H ++ G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCL 228
Query: 279 SEDGDVYSFGCGESASLG--------------------------HNAIADGQGNRHANVL 312
SE GD+Y +G ES L A+AD H +
Sbjct: 229 SETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAI 288
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 363
P + V S + HT +T +G+LY +G G GQLG
Sbjct: 289 QPFPALLDLPLGSDAVMASCGSR-----HTAVVTRTGELYTWGWGKYGQLG 334
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 34/137 (24%)
Query: 33 EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE-------------- 78
E P +LQG+R+ + AAG ++ +S+ G +Y +G + G+
Sbjct: 199 EAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAE 258
Query: 79 ----AEYGVQGTK----------------LVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 118
E G K + P L++ V A+ G+ TAV++R
Sbjct: 259 REEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTR 318
Query: 119 EGRVYTFSWGNDARLGH 135
G +YT+ WG +LGH
Sbjct: 319 TGELYTWGWGKYGQLGH 335
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 254 PKVVQALN-DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
P Q L +++ + G ++ G V+S+G G LGH + L
Sbjct: 151 PPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLE--------AEL 202
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIEL---VNN 369
P+L+ +L+ + R+ +++ W H+ L+E+G +Y +G + GQL + N
Sbjct: 203 EPRLLEALQGL--RMAKVAAGG---W--HSVCLSETGDIYIWGWNESGQLALPTRSGTEN 255
Query: 370 QTERGNPERVDID 382
+ ER ++ D
Sbjct: 256 KAEREEATELNED 268
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
GA HA ++ G+V +WG GR+G LGHG E E P++++AL + VA G + + V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 279 SEDGDVYSFGCGESASLG---HNAIADGQG-NRHANVLTPQ------------------- 315
SE GD+Y +G ES L N DG+ R A L
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFI 285
Query: 316 LVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
V + + + + + HT +T +G+LY +G G GQLG E + T
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE---DTTSLDR 342
Query: 376 PERVD 380
P RV+
Sbjct: 343 PRRVE 347
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P Y +R Q GA +L+ AGQV+++G G+ +G +L P+L+E+
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEA 206
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
L+ + + + A G + + +S G +Y + W +L P E+ V
Sbjct: 207 LQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL----------PTRNLAEDGETV 256
Query: 158 QIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL-IEQFQ-LLNL---- 211
A G V G G+ P + ++ F LL+L
Sbjct: 257 AREA-------TELNEDGSQVKRTG---------GAEDGAPAPFIAVQPFPALLDLPMGS 300
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVA 269
V + G+ H AVV + G + TWGWG+YG LGH + P+ V+ D ++ V
Sbjct: 301 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVT 360
Query: 270 TGDYTTFVVS 279
G + T+V +
Sbjct: 361 CGPWNTYVYA 370
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A + G ++ G V+S+G G LGH + L P+L+ +L+
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLE--------AELEPRLLEALQ 208
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
+ V + + H+ ++E+G +Y +G + GQL + N
Sbjct: 209 GL----VMAEVAAGGW---HSVCVSETGDIYIWGWNESGQLALPTRN 248
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 47/260 (18%)
Query: 34 VNGTPLYCRSLQG-IRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 92
V+ P + R L +R Q GA +L+ AGQV+++G G+ +G +L P
Sbjct: 144 VSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EP 201
Query: 93 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
+L+E+L+ + + + A G + + +S G +Y + W +L
Sbjct: 202 RLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLA------------------ 243
Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL---GGKLGHGSRTDEKHPRLIEQFQ-- 207
+P +A G V GL G ++ R ++ P Q
Sbjct: 244 -LPTRNLAE------------DGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPF 290
Query: 208 --LLNL----QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 261
LL+L V V+ G+ H AVV + G + TWGWG+YG LGH + P+ V+
Sbjct: 291 PALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFV 350
Query: 262 D--VKAIHVATGDYTTFVVS 279
D ++ V G + T+V +
Sbjct: 351 DKQLQVKAVTCGPWNTYVYA 370
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 278
GA HA ++ G+V +WG GR+G LGHG E E P++++AL + VA G + + V
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCV 225
Query: 279 SEDGDVYSFGCGESASLG---HNAIADGQG-NRHANVL----------------TPQLVT 318
SE GD+Y +G ES L N DG+ R A L P
Sbjct: 226 SETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFI 285
Query: 319 SLK--------QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
+++ + V++S + HT +T +G+LY +G G GQLG E +
Sbjct: 286 AVQPFPALLDLPLGSDAVKVSCGSR-----HTAVVTRTGELYTWGWGKYGQLGHE---DT 337
Query: 371 TERGNPERVD 380
T P RV+
Sbjct: 338 TSLDWPRRVE 347
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 57/232 (24%)
Query: 157 VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVV 216
+++ A + LL A Q V+S G G G+LGHG+ E PRL+E Q L + V
Sbjct: 163 LELGAEHALLLDAAGQ-----VFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTM--AEV 215
Query: 217 AAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN----EECESVPKVVQALND----VK---- 264
AAG WH+ V + G + WGW G L E+ E+V + LN+ VK
Sbjct: 216 AAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGR 275
Query: 265 --------------------------AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
A+ V+ G T VV+ G++Y++G G+ LGH
Sbjct: 276 VEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGK 350
R ++ +Q+ WN + +A+ E GK
Sbjct: 336 DTTSLDWPRRVEYFV-----------DKQLQVKAVTCGPWNTYVYAV-EKGK 375
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 262 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLK 321
+++A + G ++ G V+S+G G LGH + L P+L+ +L+
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLE--------AELEPRLLEALQ 208
Query: 322 QVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
+ V H+ ++E+G +Y +G + GQL + N
Sbjct: 209 GLTMAEVAAG-------GWHSVCVSETGDIYIWGWNESGQLALPTRN 248
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 34/290 (11%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P + LQG + + + G+ T+ I+D GQ+Y+FG D +G V P LV+
Sbjct: 399 PKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDF 458
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV 157
N V Q + G+ L+R VY++ G RLG +E + P V
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQK----------V 508
Query: 158 QIAAGYCYLLALACQPSGMAVYS-----VGCGLG--GKLGHGSRTD--------EKHP-- 200
++ G C ++ + C G + + + CGL KLG T ++ P
Sbjct: 509 EVQRGLC-IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYT 567
Query: 201 ---RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGN-EECESVPKV 256
L +Q ++ ++ G H A + + GR+ T+G + G LG G+ + + +
Sbjct: 568 TSLTLAKQLSFYKIRS--ISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLL 625
Query: 257 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
L + I V+ GD T + D ++++G G + L QG+
Sbjct: 626 GGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGS 675
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 216 VAAGAWHAAVVGQDGRVCTW-----GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
V AG H AVV + + TW G +G LGHG+ PK V+ L V+
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G T ++++G +YSFG LG N A + VL P LV +NE V Q+
Sbjct: 416 GSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSE------VLEPLLVDFF--LNEPVDQV 467
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDI 381
S +S H ALT S +Y++G G+ G+LG+ +++ + +P++V++
Sbjct: 468 SCGDS-----HIMALTRSKSVYSWGCGEYGRLGL---DSEDDVYSPQKVEV 510
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 38/294 (12%)
Query: 90 TSPQLVESLKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGN-------DARLGH-----H 136
T+PQ ++ K + Q G+ AV++ E +YT W N +LGH +
Sbjct: 339 TTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYT--WVNMQGGSKLHGQLGHGDRASY 396
Query: 137 TEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG--HGSR 194
+P VE L+ V +++ G + + C +YS G G LG +
Sbjct: 397 RQPKHVE------KLQGKSVQKVSCGSDFTV---CITDEGQLYSFGSDYYGCLGVNQSAG 447
Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP 254
++ P L++ F LN V+ G H + + V +WG G YG LG +E+ P
Sbjct: 448 SEVLEPLLVDFF--LNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSP 505
Query: 255 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTP 314
+ V+ + ++V G +F+++ G V + G E LG N G N A P
Sbjct: 506 QKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVP 565
Query: 315 QLVTSL---KQVN-ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
TSL KQ++ ++ IS + HT A+ E G+L FG+ GQLG+
Sbjct: 566 -YTTSLTLAKQLSFYKIRSISPGRT-----HTAAIDERGRLLTFGSNKCGQLGV 613
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
VY+ G +LG+G+ P + LL Q + VA G+ H+ + DG + WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G +G G+ + P KV L+ + +++A G ++ V + G+VY +G + LG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLG 214
Query: 297 HNAIADGQGNRHANVLTPQLVTSLK--QVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
GN + N LTP V +L VN+ V AHT ALT+ G LYA+
Sbjct: 215 -------LGN-NGNQLTPVRVAALHGMCVNQIVCGY---------AHTLALTDEGLLYAW 257
Query: 355 GAGDKGQLGIELVNN 369
GA GQLG NN
Sbjct: 258 GANTYGQLGTGSKNN 272
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 144/303 (47%), Gaps = 25/303 (8%)
Query: 56 AGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 115
A + ++D +V+ FG + G + LV P+ +E+L + + G+ +
Sbjct: 31 ANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEALCGKKIKSLSYGSGPHVL 88
Query: 116 LSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQP 173
L+ E V ++WG++ ++LG+ T + P + L V+++A G + +ALA
Sbjct: 89 LTTEDGV-VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA--- 144
Query: 174 SGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGRV 232
+ +++ G G++G GS ++ PR + L+ + VV +A G + V G V
Sbjct: 145 ADGELFAWGYNNCGQVGSGSTANQPTPRKVTN--CLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 233 CTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
WG+ G LG GN + P V AL+ + + G T ++++G +Y++G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
LG G N N+L+P T + ERV++I+ +S + +A A T+ G +Y
Sbjct: 263 GQLG-----TGSKN---NLLSP---TQIMVEKERVIEIAACHSTHTSA---AKTQGGHVY 308
Query: 353 AFG 355
+G
Sbjct: 309 MWG 311
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
V+ G LG G P+ +E ++ + +G H + +DG V WG
Sbjct: 43 VFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGH 101
Query: 238 GRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
Y LG+G P +V L + I VA G + + ++ DG+++++G +G
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
Query: 297 HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGA 356
+ A N TP+ VT+ +RVV I+ + + A+ +SG++Y +G
Sbjct: 162 SGSTA--------NQPTPRKVTNCLHT-KRVVNIACGQT-----SSMAVLDSGEVYGWGY 207
Query: 357 GDKGQLGIELVNNQTERGNPERV 379
GQLG+ N + P RV
Sbjct: 208 NGNGQLGL---GNNGNQLTPVRV 227
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVA 269
+ V A A V + V +G CLG G+ + VPK ++AL +K++
Sbjct: 23 KACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYG 82
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD-GQGNRHANVLTPQLVTSLKQVNERVV 328
+G + + +EDG VY++G HN + G G + + Q+ T+L + ++V+
Sbjct: 83 SGPHV-LLTTEDGVVYAWG--------HNGYSQLGNGTTNQGIAPVQVCTNL--LIKQVI 131
Query: 329 QISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
+++ + H+ AL G+L+A+G + GQ+G NQ
Sbjct: 132 EVACGSH-----HSMALAADGELFAWGYNNCGQVGSGSTANQ 168
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFV 103
L R++ A G +M + D+G+VY +G + G+ G G +L +P V +L + V
Sbjct: 178 LHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHGMCV 235
Query: 104 VQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAA 161
Q G T L+ EG +Y + +LG ++ N + P ++ +E V++IAA
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIM--VEKERVIEIAA 291
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TP+ +L G+ + Q G T+ ++D G +YA+G +++G+ G + L++ Q++
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQIMV 281
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 128
+ + + A +A ++ G VY WG
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYM--WG 311
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%)
Query: 178 VYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
+Y+ G + LGHG++ + HP L+E F + + +H+ + Q G+V T G
Sbjct: 145 LYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGH 204
Query: 238 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 296
G+ G LGHG+E VP++V+ L VA T V++EDG VY+FG LG
Sbjct: 205 GQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLG 263
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 63 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN--IFVVQAAIGNFFTAVLSREG 120
SD ++Y +G + +G Q +K P+LVE +++ Q + F + LS++G
Sbjct: 140 SDPTELYTWGDNVNFTLGHGTQQSK--HHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKG 197
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
+VYT G RLGH E + P L+ L P Q+A + + L VY+
Sbjct: 198 QVYTCGHGQGGRLGHGDELTCLVPR-LVEGLRGHPCTQVAGAKDHTVVLT---EDGYVYT 253
Query: 181 VGCGLGGKLG-HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW-- 237
G +LG + PR I+ + + VAAG +H + +D V T G
Sbjct: 254 FGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNG 312
Query: 238 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 291
G+ G L N E+ S P+ V AL+ D+ V+ D T VSE GD+Y + C +
Sbjct: 313 GQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKK 372
Query: 292 SAS 294
AS
Sbjct: 373 LAS 375
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 234 TWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 291
TWG LGHG ++ + P++V+ + V + + + +S+ G VY+ G G+
Sbjct: 147 TWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQ 206
Query: 292 SASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKL 351
LGH L P+LV L+ Q++ HT LTE G +
Sbjct: 207 GGRLGHG--------DELTCLVPRLVEGLR--GHPCTQVAGAKD-----HTVVLTEDGYV 251
Query: 352 YAFGAGDKGQLGIE 365
Y FG QLGI+
Sbjct: 252 YTFGLNTFHQLGIQ 265
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 31 GREVNGTPLYC---RSLQGIR---IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQ 84
GR +G L C R ++G+R Q A T+++++ G VY FG ++F + G+Q
Sbjct: 208 GRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFH--QLGIQ 265
Query: 85 GTKLVTS-PQLVE--SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPN 140
++ P+ ++ ++K V+ A G F T + +++ VYT N +LG+ +PN
Sbjct: 266 PPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGL-NGGQLGYLQDPN 322
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 178/444 (40%), Gaps = 95/444 (21%)
Query: 3 TPAYQVAHL-SPILR-----PDIINERN---GKRNLLGREVNGTPLYCRSL-----QGIR 48
TP + A L +P+L P II +R G+ LG T R + +G++
Sbjct: 127 TPGRKQAKLVAPLLTYDLFAPSIIGDRVLSCGEGEALGHPGRTTTKKPRKVDIFEEEGLK 186
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFG-------EAEYGVQGTKLVTSPQLVESLKNI 101
+QA AG + +++ G+VY G + G E E V + +E K
Sbjct: 187 PLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIE--KEG 244
Query: 102 FVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPV----- 156
+V A G FTA L+ +G V +WGN +V+ HPLL ++ PV
Sbjct: 245 KIVMLAAGASFTAALTDQGSV--IAWGN-----LRNSNGNVDVHPLLHKMQEAPVVIVHQ 297
Query: 157 -----VQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT---------DEKHPRL 202
V+IAAG +L+ L + + + G G G+LG SRT DE L
Sbjct: 298 AKRKIVKIAAGENHLVMLDEKG---CLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHL 354
Query: 203 IEQFQLLN-------LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK 255
+ + + + V A+G W V G+DG+ +G Y LG +E +
Sbjct: 355 LVPLRFKHKGKFFDVVAKNVFASGFW-TIVHGEDGKYYAFGLNNYAQLGIKVDEAD---- 409
Query: 256 VVQALNDVKAIHV-------ATGDYTTFVVSE----------DGDVYSFGCGESASLGHN 298
V Q D + + V A G TFV E DG V++ G +LG
Sbjct: 410 VGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLG 469
Query: 299 AIADGQGNRHANVLTPQLVTSLKQVNERVVQIS--LTNSIYWNAHTFALTESGKLYAFGA 356
+H T Q + + + ++V +S L SI W +E G YA+G
Sbjct: 470 NWTGKDDQQHWLYDTIQEI----EFDSKIVGVSAKLATSIAW-------SEDGTAYAWGF 518
Query: 357 GDKGQLGIELVNNQTER-GNPERV 379
GQLG+ L + + PE +
Sbjct: 519 DTTGQLGLGLKDEDEKMVSKPEEI 542
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P ++L+ ++ AA G T++ +D G VYA G ++ G+ G + T Q+V
Sbjct: 78 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR-DTFHQIVFF 136
Query: 98 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENI 154
+ Q + G +A L+ +G++ F WG+++ ++G + N PH + +G
Sbjct: 137 TPADTIKQLSAGANTSAALTEDGKL--FMWGDNSEGQIGLEDKSNVCIPHEVTVGK---- 190
Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPV 214
P+ I+ GY Y A +Y+ G GKLG + H R ++ + + +
Sbjct: 191 PISWISCGY-YHSAFVTMDG--ELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVI 246
Query: 215 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDY 273
VA G H V+ + V +G G++G LG G E S PK+++ + D K H++ G+
Sbjct: 247 QVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGEN 305
Query: 274 TTFVVSEDGDVYSFGCGESASLG 296
T +++E G +Y+FG G LG
Sbjct: 306 HTALMTELGLLYTFGDGRHGKLG 328
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 46/310 (14%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D G V+ FGK F E P KN + + G+ TA+++
Sbjct: 7 LVPDTGAVFTFGKTKFAE-----------NIPSKF-WFKNDIPICLSCGDEHTAIVTGNN 54
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
++Y F N +LG ++ ++P + L+ V A G + L ++ G VY+
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKPT-CIKALKPEKVKLAACGRNHTL-VSTDTGG--VYA 110
Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQF-QLLNLQPV----VVAAGAWHAAVVGQDGRVCTW 235
G G+LG G D + F Q++ P ++AGA +A + +DG++ W
Sbjct: 111 AGGNNEGQLGLGDTDDR------DTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMW 164
Query: 236 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 295
G G +G ++ +P V + I + G Y + V+ DG++Y+FG E+ L
Sbjct: 165 GDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTMDGELYTFGEPENGKL 222
Query: 296 G-HNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAF 354
G N + N +PQ V + ERV+Q++ HT LTE +YAF
Sbjct: 223 GLPNELL-------MNHRSPQRVLG---IPERVIQVAC-----GGGHTVVLTEK-VVYAF 266
Query: 355 GAGDKGQLGI 364
G G GQLG+
Sbjct: 267 GLGQFGQLGL 276
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 29/319 (9%)
Query: 53 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
+ G T +++ ++Y FG +++G+ G+ + P +++LK V AA G
Sbjct: 41 SCGDEHTAIVTGNNKLYMFGSNNWGQ--LGLGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
T V + G VY N+ +LG + H ++ + Q++AG AL
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT-- 156
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
++ G G++G +++ P ++ +P+ ++ G +H+A V DG
Sbjct: 157 -EDGKLFMWGDNSEGQIGLEDKSNVCIPH-----EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 232 VCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
+ T+G G LG NE P+ V + + + I VA G T V++E VY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV-VYAFGL 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LG G P+++ +K ++++ IS + HT +TE G
Sbjct: 269 GQFGQLG-------LGTFLFETSEPKIIERIK--DQKICHISCGEN-----HTALMTELG 314
Query: 350 KLYAFGAGDKGQLGIELVN 368
LY FG G G+LG+ + N
Sbjct: 315 LLYTFGDGRHGKLGLGMEN 333
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
+F N P+ ++ G H A+V + ++ +G +G LG G++ P ++AL K
Sbjct: 29 KFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK 88
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
A G T V ++ G VY+ G LG D TP ++KQ++
Sbjct: 89 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP--ADTIKQLS 146
Query: 325 ERVVQISLTNSIYWNAHTF-ALTESGKLYAFGAGDKGQLGIELVNN 369
A+T ALTE GKL+ +G +GQ+G+E +N
Sbjct: 147 -------------AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSN 179
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 139/346 (40%), Gaps = 57/346 (16%)
Query: 61 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 120
L+ D+G V+ FGK F E G K KN V + G+ +AV++
Sbjct: 7 LMPDSGAVFTFGKSKFAENNPG----KFW--------FKNDVPVHLSCGDEHSAVVTGNN 54
Query: 121 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
++Y F N +LG ++ +P + L+ V A G + L G VY+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKP-TCVKALKPEKVKLAACGRNHTLVST---EGGNVYA 110
Query: 181 VGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRY 240
G G+LG G T+E++ + F + ++AG+ +A + +DGR+ WG
Sbjct: 111 TGGNNEGQLGLGD-TEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSE 169
Query: 241 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG---- 296
G +G N VP+ V V I + G Y + V+ DG++Y FG E+ LG
Sbjct: 170 GQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ 227
Query: 297 ---------------HNAIADGQGNRHANVLTPQLV-------------------TSLKQ 322
I G H VLT V TS +
Sbjct: 228 LLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGLGQFGQLGLGTFLFETSEPK 287
Query: 323 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVN 368
V E + +++ HT +T+ G +Y FG G G+LG+ L N
Sbjct: 288 VIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P ++L+ ++ AA G T++ ++ G VYA G ++ E + G+ T+ + ++
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNN--EGQLGLGDTEERNTFHVISF 135
Query: 98 LKNIFVV-QAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLEN 153
+ + Q + G+ +A L+ +GR+ F WG+++ ++G N P + +G
Sbjct: 136 FTSEHKIKQLSAGSNTSAALTEDGRL--FMWGDNSEGQIGLKNVSNVCVPQQVTIGK--- 190
Query: 154 IPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRT--DEKHPRLIEQFQLLNL 211
PV I+ GY Y A + V+ G GKLG ++ + + P+L+ + +
Sbjct: 191 -PVSWISCGY-YHSAFVTTDGELYVF--GEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI 246
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVAT 270
Q VA G H V+ ++ V T+G G++G LG G E S PKV++ + D +++
Sbjct: 247 Q---VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLG 296
G+ T ++++ G +Y+FG G LG
Sbjct: 303 GENHTALITDIGLMYTFGDGRHGKLG 328
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 205 QFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 264
+F N PV ++ G H+AVV + ++ +G +G LG G++ S P V+AL K
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK 88
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVN 324
A G T V +E G+VY+ G LG + D + +V++ TS
Sbjct: 89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLG---LGDTEERNTFHVIS--FFTS----E 139
Query: 325 ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNN 369
++ Q+S ++ + ALTE G+L+ +G +GQ+G++ V+N
Sbjct: 140 HKIKQLSAGSNT-----SAALTEDGRLFMWGDNSEGQIGLKNVSN 179
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 44/317 (13%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 121
+ A ++A+G +S+G+ G + ++++ QL + K+ + + G +AV++ EG
Sbjct: 11 VPTAAALFAWGANSYGQLGLGHK-EDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 122 VYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYS 180
++ D +LG HTE +V +L + Q+A G+ + + L V S
Sbjct: 70 LFVCGLNKDGQLGLGHTE--EVLYFTPCKSLLGCAIQQVACGWDFTIILT---ENGQVLS 124
Query: 181 VGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWG 238
G G+LG HG R P+ IE LL + V +AAG HA G V WG
Sbjct: 125 CGSNSFGQLGVPHGPRRCVI-PQAIE---LLREKVVSIAAGLRHALAATASGTVFQWG-- 178
Query: 239 RYGCLGHGNEECE----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 288
G G C P V L + +A+ V G + +++ G++Y +G
Sbjct: 179 -TGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Query: 289 CGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALT 346
+ L A A +L PQ + + NE++ + W+ H A T
Sbjct: 238 SNKHGQLASQA---------AFLLLPQRIEARCFQNEKIAAV-------WSGWTHLVAQT 281
Query: 347 ESGKLYAFGAGDKGQLG 363
+GK++ +G D GQLG
Sbjct: 282 VTGKVFTWGRADYGQLG 298
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 41 CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLK 99
C+SL G I Q A G T+++++ GQV + G +SFG + GV G + PQ +E L+
Sbjct: 95 CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG--QLGVPHGPRRCVIPQAIELLR 152
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDV--------EPHPLLGT 150
VV A G + G V F WG A G P EP + G
Sbjct: 153 EK-VVSIAAGLRHALAATASGTV--FQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTG- 208
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLN 210
LEN V + AG + +L +Y G G+L P+ IE N
Sbjct: 209 LENSQAVCVLAGSDHSASLT---DAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQN 264
Query: 211 LQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 244
+ V +G H G+V TWG YG LG
Sbjct: 265 EKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 40 YCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 99
+C+S RI G G + +++D G ++ G + G+ G L +P +SL
Sbjct: 45 FCKSGCIKRIT---GGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLL 99
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQ 158
+ Q A G FT +L+ G+V + + +LG H V P + L VV
Sbjct: 100 GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAI--ELLREKVVS 157
Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGL---GGKLGHGSR----TDEKHPRLIEQFQLLNL 211
IAAG + ALA SG V+ G GL G +L G K P + + N
Sbjct: 158 IAAGLRH--ALAATASGT-VFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLE--NS 212
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVA 269
Q V V AG+ H+A + G + WG ++G L +P+ ++A + K V
Sbjct: 213 QAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVW 271
Query: 270 TGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+G + G V+++G + LG
Sbjct: 272 SGWTHLVAQTVTGKVFTWGRADYGQLGRT 300
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 33/248 (13%)
Query: 48 RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----VTSPQLVESLKNIF 102
+++ AAG + + +G V+ +G G L P V L+N
Sbjct: 154 KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQ 213
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLENIPVVQ 158
V G+ +A L+ G +Y + +L P +E +N +
Sbjct: 214 AVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEAR----CFQNEKIAA 269
Query: 159 IAAGYCYLLALACQPSGMAVYSVGCGLGGKLG------HGSRTDEKHPRLI---EQFQLL 209
+ +G+ +L+A Q V++ G G+LG G ++++ P L Q
Sbjct: 270 VWSGWTHLVA---QTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTP 326
Query: 210 NLQPVV-----VAAGAWHAAVVGQDGRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDV 263
+ P + ++ G+ H V G VC +WGW +G G G E PK V L
Sbjct: 327 SCLPCLTGATEISCGSEHNLAV--IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFF 384
Query: 264 KAIHVATG 271
+HV G
Sbjct: 385 LGLHVGCG 392
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 130/308 (42%), Gaps = 44/308 (14%)
Query: 74 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 133
+S+G+ G + L+ QL + K V + G +AV++ G ++ D +L
Sbjct: 23 NSYGQLGLGHKEDVLLPQ-QLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 134 G-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLG-- 190
G HTE D+ +L P+ Q+A G+ + + L V S G G+LG
Sbjct: 82 GLGHTE--DIPYFTPCKSLFGCPIQQVACGWDFTIMLT---ENGQVLSCGSNSFGQLGVP 136
Query: 191 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC 250
HG R P+ IE L + V +AAG HA G V WG G C G C
Sbjct: 137 HGPRRCVV-PQAIE---LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASC---GRRLC 189
Query: 251 E----------SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 300
P V L + KA+ V G + +++ G+VY +G + L + A
Sbjct: 190 PGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA- 248
Query: 301 ADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALTESGKLYAFGAGD 358
A + PQ + + NE+V I W+ H A TE+GK++ +G D
Sbjct: 249 --------AFLPVPQKIEAHCFQNEKVTAI-------WSGWTHLVAQTETGKMFTWGRAD 293
Query: 359 KGQLGIEL 366
GQLG +L
Sbjct: 294 YGQLGRKL 301
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 118/309 (38%), Gaps = 51/309 (16%)
Query: 41 CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLK 99
C+SL G I Q A G T+++++ GQV + G +SFG + GV G + PQ +E K
Sbjct: 95 CKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG--QLGVPHGPRRCVVPQAIELHK 152
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPNDV--------EPHPLLGT 150
V AA G + G V F WG A G P EP + G
Sbjct: 153 EKVVCIAA-GLRHAVAATASGIV--FQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG- 208
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKH----PRLIEQF 206
LEN + + AG + +L VY + G HG +E P+ IE
Sbjct: 209 LENSKAMCVLAGSDHSASLT---DAGEVY-----VWGSNKHGQLANEAAFLPVPQKIEAH 260
Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES---------VPKVV 257
N + + +G H + G++ TWG YG LG E E +P
Sbjct: 261 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 320
Query: 258 QALNDVKAIHVATGDYTTFVVSED------GDVYSFGCGESASLGHNAIADGQGNRHANV 311
+ + H TG SE G YS+G E H DG ANV
Sbjct: 321 PPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNE-----HGMCGDG---TEANV 372
Query: 312 LTPQLVTSL 320
P+ V +L
Sbjct: 373 WAPKPVQAL 381
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 29 LLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL 88
LL +++N +C+ RI G G + +++D G ++ G + G + G+ T+
Sbjct: 37 LLPQQLND---FCKPRSVRRIT---GGGGHSAVVTDGGDLFVCGLNKDG--QLGLGHTED 88
Query: 89 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPL 147
+ +SL + Q A G FT +L+ G+V + + +LG H V P +
Sbjct: 89 IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAI 148
Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGL---GGKLGHGSRT----DEKHP 200
L VV IAAG + A+A SG+ V+ G GL G +L G K P
Sbjct: 149 --ELHKEKVVCIAAGLRH--AVAATASGI-VFQWGTGLASCGRRLCPGQTLPLFFTAKEP 203
Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC-ESVPKVVQA 259
+ + N + + V AG+ H+A + G V WG ++G L NE VP+ ++A
Sbjct: 204 SRVTGLE--NSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEA 259
Query: 260 --LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 298
+ K + +G +E G ++++G + LG
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 95/252 (37%), Gaps = 33/252 (13%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-----VTSPQLVESL 98
L +++ AAG + + +G V+ +G G L P V L
Sbjct: 150 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL 209
Query: 99 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDVEPHPLLGTLENI 154
+N + G+ +A L+ G VY + +L + P +E H +N
Sbjct: 210 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAH----CFQNE 265
Query: 155 PVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-----KHPRLIEQFQLL 209
V I +G+ +L+A Q +++ G G+LG T E K + +
Sbjct: 266 KVTAIWSGWTHLVA---QTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPP 322
Query: 210 NLQP---------VVVAAGAWH-AAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 259
N P V+ G+ H A++G G +WGW +G G G E PK VQA
Sbjct: 323 NSMPSSPHCLTGATEVSCGSEHNLAIIG--GVCYSWGWNEHGMCGDGTEANVWAPKPVQA 380
Query: 260 LNDVKAIHVATG 271
L + V G
Sbjct: 381 LLSSSGLLVGCG 392
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 38/214 (17%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P L+ + + AG+ + ++DAG+VY +G + G+ + PQ +E+
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL---ANEAAFLPVPQKIEA 259
Query: 98 --LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----------------- 138
+N V G + G+++T+ + +LG E
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCS 319
Query: 139 --PNDV--EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSR 194
PN + PH L G E ++ G + LA+ G YS G G G G+
Sbjct: 320 RPPNSMPSSPHCLTGATE------VSCGSEHNLAII----GGVCYSWGWNEHGMCGDGTE 369
Query: 195 TDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQ 228
+ P+ ++ LL+ ++V GA H+ + Q
Sbjct: 370 ANVWAPKPVQ--ALLSSSGLLVGCGAGHSLALCQ 401
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 142/352 (40%), Gaps = 65/352 (18%)
Query: 53 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
A GA +++S +GQ+ A+G + FG+ G ++ Q+ I + A G F
Sbjct: 782 ACGAEHILVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVDGDWPAIEKI--ACGQFH 838
Query: 113 TAVLSREGRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALA 170
+A + +G ++TF WG +LGH N + P + G + V QIA G + + L
Sbjct: 839 SAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI--CKVTQIACGRAHTVVLT 896
Query: 171 CQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDG 230
+G + CG G G D K L L+ +A +H+ + +D
Sbjct: 897 --DTGRVLV---CGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDN 951
Query: 231 RVCTWGWG--------------RYGCLGHGNEECE-------SVPKV------------- 256
RV WG R L + + S P+V
Sbjct: 952 RVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDL 1011
Query: 257 ----VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVL 312
V+ D + VA G + +++ +G +Y++G G LGH GN++ +
Sbjct: 1012 GLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGH-------GNKNERME 1064
Query: 313 TPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
Q+ + + V +SL N+ HT A T+ G ++A+G D GQ G+
Sbjct: 1065 PHQV---FEPNGAKWVNVSLGNN-----HTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH-VAT 270
+P +A GA H V+ G++ WG R+G G G+ + + Q D AI +A
Sbjct: 777 RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS--FRIANLHQVDGDWPAIEKIAC 834
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQI 330
G + + + DG +++FG G LGH G ++N L P V L +V QI
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHG------GRNNSNQLVPTRVNGLIC---KVTQI 885
Query: 331 SLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIE 365
+ AHT LT++G++ G+G GQ+G++
Sbjct: 886 ACG-----RAHTVVLTDTGRVLVCGSGSYGQMGVD 915
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 30/266 (11%)
Query: 23 RNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG 82
RN L+ VNG L C+ + Q A G T++++D G+V G S+G+
Sbjct: 864 RNNSNQLVPTRVNG--LICK------VTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD 915
Query: 83 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 142
K+ L L + V A + + ++ + RV F WG N
Sbjct: 916 DDIKKVFAFTPL--PLGPLRVRDIATHYYHSICITEDNRV--FEWGR----------NPQ 961
Query: 143 EPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRL 202
E + ++ I Q+ PS + + G L + + L
Sbjct: 962 ELKMRMFVMKKIRSAQLKNTE--------DPSSPSPSTNGSTPRVNLNLPAEIPREDLGL 1013
Query: 203 IEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALND 262
E L+ V VA G H+A++ +G + TWG G LGHGN+ P V N
Sbjct: 1014 REVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNG 1073
Query: 263 VKAIHVATGDYTTFVVSEDGDVYSFG 288
K ++V+ G+ T ++DG V+++G
Sbjct: 1074 AKWVNVSLGNNHTIASTDDGSVFAWG 1099
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 29/320 (9%)
Query: 53 AAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 112
+ G T +++ ++Y FG +++G+ G + T V+ P V++LK V AA G
Sbjct: 41 SCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST--VSKPTCVKALKPEKVKFAACGRNH 98
Query: 113 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQ 172
T V + G+VY N+ +LG H + + Q++AG AL
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT-- 156
Query: 173 PSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVV-VAAGAWHAAVVGQDGR 231
++ G G++G + T+ P+ Q+ +P+ ++ G +H+A V +G+
Sbjct: 157 -EDGELFMWGDNSEGQIGLENVTNVCVPQ-----QVTVGKPISWISCGYYHSAFVTTEGQ 210
Query: 232 VCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
+ T+G G LG N+ +P+ V + K + VA G T V++E VY+FG
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA-VYTFGL 268
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
G+ LG + T TS+ + E + ++ HT +T+ G
Sbjct: 269 GQFGQLG--------------LGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMG 314
Query: 350 KLYAFGAGDKGQLGIELVNN 369
+Y FG G G+LG+ L N+
Sbjct: 315 LMYTFGDGRHGKLGLGLENS 334
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 38 PLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 97
P ++L+ ++ AA G T++ ++ G+VYA G ++ E + G+ T+ ++ L+
Sbjct: 78 PTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNN--EGQLGLGDTEERSTFHLI-- 133
Query: 98 LKNIFVVQAAI-----GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTL 151
+ F Q I G+ +A L+ +G ++ + ++ ++G N P + +G
Sbjct: 134 --SFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK- 190
Query: 152 ENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNL 211
P+ I+ GY + + + +Y+ G GKLG ++ H R+ + +
Sbjct: 191 ---PISWISCGYYHSAFVTTE---GQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPG 243
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVAT 270
+ V VA G H V+ + V T+G G++G LG G E SVPK ++ + D K +A
Sbjct: 244 KVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIAC 302
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLG 296
G+ T ++++ G +Y+FG G LG
Sbjct: 303 GENHTALITDMGLMYTFGDGRHGKLG 328
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V T+G ++ E++P NDV ++ GD T VV+ + +Y FG
Sbjct: 12 GAVFTFGKTQFA---------ENIPSKFWFRNDVPTF-LSCGDEHTAVVTGNNKLYMFGS 61
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
LG + + V P V +LK + HT TE G
Sbjct: 62 NNWGQLGLGS--------KSTVSKPTCVKALKPEKVKFAACGRN-------HTLVSTEGG 106
Query: 350 KLYAFGAGDKGQLGI 364
K+YA G ++GQLG+
Sbjct: 107 KVYAAGGNNEGQLGL 121
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 138/325 (42%), Gaps = 40/325 (12%)
Query: 62 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREG 120
+S A ++A+G +S+G+ G+ + V PQ + +++ G +AV++ G
Sbjct: 11 VSAAAVLFAWGANSYGQ--LGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGG 68
Query: 121 RVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY 179
++ D +LG HTE +V + L P+ Q+A G+ + + L V
Sbjct: 69 DLFVCGLNKDGQLGLGHTE--EVLRFTICKPLRGCPIRQVACGWDFTIMLT---EKGQVL 123
Query: 180 SVGCGLGGKLG--HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGW 237
S G G+LG HG R P+ IE L + V VAAG HA G V WG
Sbjct: 124 SCGSNAFGQLGVPHGPRKCVV-PQAIE---CLREKVVCVAAGLRHALATTATGSVFQWGT 179
Query: 238 G-----RYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 290
G R C G + P V L + A+ G + +++ G++Y +G
Sbjct: 180 GLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRN 239
Query: 291 ESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWN--AHTFALTES 348
+ L A+ + PQ + + +E+V + W+ H A TE+
Sbjct: 240 KHGQLASRAVF---------LPLPQRIEAHYFQDEKVTAV-------WSGWTHLVAKTET 283
Query: 349 GKLYAFGAGDKGQLGIELVNNQTER 373
GK++ +G D GQLG L + ++
Sbjct: 284 GKVFTWGRADYGQLGRRLEPPEAQK 308
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 121/322 (37%), Gaps = 57/322 (17%)
Query: 41 CRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLK 99
C+ L+G I Q A G T+++++ GQV + G ++FG + GV G + PQ +E L+
Sbjct: 95 CKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG--QLGVPHGPRKCVVPQAIECLR 152
Query: 100 NIFVVQAAIGNFFTAVLSREGRVYTFSWGND-ARLGHHTEPND--------VEPHPLLGT 150
V AA G + G V F WG A G P EP + G
Sbjct: 153 EKVVCVAA-GLRHALATTATGSV--FQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTG- 208
Query: 151 LENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE----KHPRLIEQF 206
LEN V AG + +L + V+ G+ HG P+ IE
Sbjct: 209 LENSTAVCAVAGSDHSASLT-DTGELYVW-------GRNKHGQLASRAVFLPLPQRIEAH 260
Query: 207 QLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECE--------------- 251
+ + V +G H + G+V TWG YG LG E E
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQG 320
Query: 252 ---SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGNRH 308
SVP + L A ++ G V D S+G E H DG
Sbjct: 321 PQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNE-----HGMCGDGT---E 369
Query: 309 ANVLTPQLVTSLKQVNERVVQI 330
+NV TP V +L R++ +
Sbjct: 370 SNVWTPTPVQALPPSPSRLLLV 391
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 20/258 (7%)
Query: 49 IIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 108
I G G + +++D G ++ G + G + G+ T+ V + + L+ + Q A
Sbjct: 51 IKSVTGGGGHSAVVTDGGDLFVCGLNKDG--QLGLGHTEEVLRFTICKPLRGCPIRQVAC 108
Query: 109 GNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLL 167
G FT +L+ +G+V + +LG H V P + E VV +AAG + L
Sbjct: 109 GWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREK--VVCVAAGLRHAL 166
Query: 168 ALACQPSGMAVYSVGCGL---GGKLGHGSR----TDEKHPRLIEQFQLLNLQPVVVAAGA 220
A S V+ G GL G +L G K P + + N V AG+
Sbjct: 167 ATTATGS---VFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLE--NSTAVCAVAGS 221
Query: 221 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVV 278
H+A + G + WG ++G L +P+ ++A D K V +G
Sbjct: 222 DHSASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAK 280
Query: 279 SEDGDVYSFGCGESASLG 296
+E G V+++G + LG
Sbjct: 281 TETGKVFTWGRADYGQLG 298
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 24/268 (8%)
Query: 46 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 105
G+ I A G T ++D G + FG S G +G ++ P +VE+L +VQ
Sbjct: 396 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG--NLTDISQPTIVEALLGYEMVQ 453
Query: 106 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVV---QIAAG 162
A G LS +G + F+WG + P + +PV +
Sbjct: 454 VACGASHVLALSTDGEL--FAWGRGDGGRLGLGTRESHNCP-----QQVPVAPGQEAQRV 506
Query: 163 YCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQ-----------LLNL 211
C + + S V + G KLG + ++ P +Q + L+
Sbjct: 507 VCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQ 566
Query: 212 QPVV-VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 270
+P++ V G H+A + G T+G ++G LG + P VQ L +K + VA
Sbjct: 567 EPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVAC 626
Query: 271 GDYTTFVVSEDGDVYSFGCGESASLGHN 298
GD T V +G+VYS+G G LG
Sbjct: 627 GDAFTVAVGAEGEVYSWGKGTRGRLGRR 654
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 146 PLLGTLENIPVVQIAAGYCYLLALACQPSGMAVY----SVGCGLGGKLGHGSRTDEKHPR 201
PL + N VVQ+AAG + SG + +G G GG L G+ + P+
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVT--RSGRLILWEAPPLGAG-GGTLLPGA-VELPQPQ 385
Query: 202 LIEQFQLLNLQPVV----VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 257
+ +F L Q V VA G A + G + T+G G GCLGHGN S P +V
Sbjct: 386 FVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIV 443
Query: 258 QALNDVKAIHVATGDYTTFVVSEDGDVYSF 287
+AL + + VA G +S DG+++++
Sbjct: 444 EALLGYEMVQVACGASHVLALSTDGELFAW 473
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 37 TPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 96
TPL L ++ G + I+ +G Y FG + G+ G ++ +P V+
Sbjct: 557 TPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQ--LGTSSRRVSRAPCRVQ 614
Query: 97 SLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDV---EPHPLLG 149
L+ I +V A G+ FT + EG VY++ G RLG E P V E HP +
Sbjct: 615 GLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMV 674
Query: 150 T 150
T
Sbjct: 675 T 675
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 21 NERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAE 80
+ ++G+ R V+ P + L+GI+++ A G T+ + G+VY++GK + G
Sbjct: 593 SNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLG 652
Query: 81 YGVQGTKLVTSPQLVESLKNIFV-VQAAIGNFFTAVLS 117
+ L QL E+ + V GN AV S
Sbjct: 653 RRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTLLAVRS 690
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 150/363 (41%), Gaps = 35/363 (9%)
Query: 13 PILRPDIINERNGKRNLLGREVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG 72
P L P + E+ G ++ V G ++ +L G I + G +L D Q
Sbjct: 51 PRLNPYLTEEKLGGTKIVDFAVGG--MHTLALDGKNRIWSWGGNDSEVLGRDTCQAKEVL 108
Query: 73 KD-------SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 125
KD + + + ++P LVE+L +VQ A + +A L G VY
Sbjct: 109 KDIDGKNGNDDDDDDEDGDLNEAESTPALVENLPEGEIVQLAATDNLSAALLSNGDVY-- 166
Query: 126 SWG----NDARLGHHTEPNDVEPHPL-LGTLE-NIPVVQIAAGYCYLLALACQPSGMAVY 179
SWG N+ LG + ++ PL + L+ + P+++ LLAL + V
Sbjct: 167 SWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKKHCPIMRSVK--IILLALDSKEWMPGVN 224
Query: 180 SVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR 239
LG ++ R P +QF L N++ +A+G +H + V WG +
Sbjct: 225 GQQYQLGRRILERHRYRSLEP---QQFGLYNIK--YIASGDFHCFAIDHSHNVYAWGLNQ 279
Query: 240 YG--CLGHGNEECES-----VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGES 292
YG L N E E P ++ L+ +A G++ T ++EDG VY++G +
Sbjct: 280 YGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHHTLALTEDGQVYAWGRYDM 339
Query: 293 ASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLY 352
+G + N T + L + + + + + H+FA+TE G +Y
Sbjct: 340 KEIGIPKDKLPKSTFKINTGTHGSFSFL----QNLFAVKIKTIGVGSHHSFAVTEDGVVY 395
Query: 353 AFG 355
A+G
Sbjct: 396 AWG 398
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 46/324 (14%)
Query: 33 EVNGTPLYCRSLQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV--QGTKLVT 90
E TP +L I+Q AA + + G VY++G E G KL
Sbjct: 130 EAESTPALVENLPEGEIVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQK 189
Query: 91 SPQLVESLKNIFVVQAAIGNFFTAVLSRE------GRVYTFSWGNDARLGHHTEPNDVEP 144
+P ++ LK + ++ A+ S+E G+ Y R+ +EP
Sbjct: 190 TPLKIKELKKHCPIMRSVKIILLALDSKEWMPGVNGQQYQLG----RRILERHRYRSLEP 245
Query: 145 HPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVG-CGL---GGKLGHGSRTDEKHP 200
L NI + +C+ + + + G C L G+L GS P
Sbjct: 246 QQF--GLYNIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVL--MKP 301
Query: 201 RLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPK----- 255
LI + ++ + AAG H + +DG+V + WGRY G + + +PK
Sbjct: 302 TLIPELSHKGIKEI--AAGEHHTLALTEDGQV--YAWGRYDMKEIGIPK-DKLPKSTFKI 356
Query: 256 ---------VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQGN 306
+Q L VK + G + +F V+EDG VY++G E+ G D
Sbjct: 357 NTGTHGSFSFLQNLFAVKIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSID---- 412
Query: 307 RHANVLTPQLVTSLKQVNERVVQI 330
+V P + + NE ++ I
Sbjct: 413 ---DVEKPTRIVNTATKNEDILLI 433
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 146/348 (41%), Gaps = 80/348 (22%)
Query: 68 VYAFGKDSFGEAEYGVQG-TKLVTSPQL-----VESLKNIFVVQAAIGNFFTAVLSREGR 121
V+ +G S E G K V P+L E L +V A+G T L + R
Sbjct: 26 VFVWGTGSMCELGLGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLALDGKNR 85
Query: 122 VYTFSWGNDAR-LGHHT-------------------------EPNDVEPHPLLGTLENIP 155
++++ GND+ LG T + N+ E P L +EN+P
Sbjct: 86 IWSWG-GNDSEVLGRDTCQAKEVLKDIDGKNGNDDDDDDEDGDLNEAESTPAL--VENLP 142
Query: 156 ---VVQIAAGYCYLLALACQPSGMAVYSVGC-----GLGGKLGHGSRTDEKHPRLIEQFQ 207
+VQ+AA AL S VYS GC GL G L + +K P I++ +
Sbjct: 143 EGEIVQLAATDNLSAALL---SNGDVYSWGCFRCNEGLLGFLRDEIKL-QKTPLKIKELK 198
Query: 208 -----LLNLQPVVVA--AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 260
+ +++ +++A + W V GQ ++ GR H E P+ L
Sbjct: 199 KHCPIMRSVKIILLALDSKEWMPGVNGQQYQL-----GRRILERHRYRSLE--PQQF-GL 250
Query: 261 NDVKAIHVATGDYTTFVVSEDGDVYSFGC---GESASLGHNA-IADGQGNRHANVLTPQL 316
++K ++A+GD+ F + +VY++G G+ A G N + DG + ++ P L
Sbjct: 251 YNIK--YIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDG-----SVLMKPTL 303
Query: 317 VTSLKQVNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
+ L + + HT ALTE G++YA+G D ++GI
Sbjct: 304 IPELSHKGIKEIAAG-------EHHTLALTEDGQVYAWGRYDMKEIGI 344
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 97/276 (35%), Gaps = 75/276 (27%)
Query: 173 PSGMAVYSVG--CGLGGKLGHGSRTDE-KHPRL---IEQFQLLNLQPVVVAAGAWHAAVV 226
P + V+ G C LG LG ++ E K PRL + + +L + V A G H +
Sbjct: 23 PLDVFVWGTGSMCELG--LGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGGMHTLAL 80
Query: 227 GQDGRVCTWGWGRYGCLGHGN---------------------------EECESVPKVVQA 259
R+ +WG LG E ES P +V+
Sbjct: 81 DGKNRIWSWGGNDSEVLGRDTCQAKEVLKDIDGKNGNDDDDDDEDGDLNEAESTPALVEN 140
Query: 260 LNDVKAIHVATGDYTTFVVSEDGDVYSFGC-----------GESASLGHNAIADGQGNRH 308
L + + + +A D + + +GDVYS+GC + L + + +H
Sbjct: 141 LPEGEIVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLKIKELKKH 200
Query: 309 ANVLTPQLVTSLK---------------QVNERVV-----------QISLTNSIYW---N 339
++ + L Q+ R++ Q L N Y +
Sbjct: 201 CPIMRSVKIILLALDSKEWMPGVNGQQYQLGRRILERHRYRSLEPQQFGLYNIKYIASGD 260
Query: 340 AHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGN 375
H FA+ S +YA+G GQ + N + E G+
Sbjct: 261 FHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGS 296
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 45 QGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-- 102
Q R++Q + G +++++D V++ G +S+G+ V ++ + V +++
Sbjct: 172 QETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ 231
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQIA 160
VVQ A G + L+ +G VY+ WG D + LGH+ + P L G L + V+Q+A
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS--SPTKLGGDLAGVNVIQVA 289
Query: 161 A-GYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPRLIEQFQLLNLQPVVVAA- 218
G C L A G+ G G L S TD + + V AA
Sbjct: 290 TYGDCCLAVSA--DGGL----FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAAC 343
Query: 219 GAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES-VPKVV 257
G AV+ +G V WG YG LG G ES VP+++
Sbjct: 344 GGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMI 380
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 126/330 (38%), Gaps = 66/330 (20%)
Query: 103 VVQAAIGNFFTAVLSREGRVYTFSWG----NDARLGHHTEPND--------VEPHPL--- 147
+ AA G FT + S+ V T WG D++LG H D +EP P+
Sbjct: 109 ISSAACGYGFTLLSSKTADV-TKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
Query: 148 LGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDEKHPR--LIEQ 205
L + V+Q++ G + L L + V+S+G G+ G +E + + +
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDRE---GVFSMGNNSYGQCGRKVVENEIYSESHRVHR 224
Query: 206 FQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVK 264
Q + Q V VA G H+ + G V + GWG G G G+ S P K+ L V
Sbjct: 225 MQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVN 284
Query: 265 AIHVATGDYTTFVVSEDGDVYSFGCGE----------------------------SASLG 296
I VAT VS DG ++ +G E A+ G
Sbjct: 285 VIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Query: 297 HNAIADGQGNRHANVLT-------PQLVTS---------LKQVNERVVQISLTNSIYWNA 340
A G H V P LV S L + E +I ++ +
Sbjct: 345 GTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 341 HTFALTESGKLYAFGAGDKGQLGIELVNNQ 370
H ALT G+L+ +G +G LGI + +Q
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQ 434
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 140/330 (42%), Gaps = 42/330 (12%)
Query: 50 IQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 109
+ +AG ++++ +G +Y+FG + G + P L++ + A G
Sbjct: 77 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--G 134
Query: 110 NFFTAVLSREGRVYTFSWGN----DARLGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCY 165
+ +A L +GRV F+WG+ +G + N P L+ E IA+G +
Sbjct: 135 DSHSACLLEDGRV--FAWGSFRDSHGNMGLTIDGNKRTPIDLM---EGTVCCSIASGADH 189
Query: 166 LLALACQPSGMAVYSVGCGLGGKLGHGS-RTDEKHPRLIEQFQLLNLQPVVVAAGAWHA- 223
L+ L + V++VGC G+LG S R+ R ++ L Q ++ A + A
Sbjct: 190 LVILT---TAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAI 246
Query: 224 ------AVVGQDGRVCTW--GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYT 274
+ + W G + L H + E ++ + L D++ H+A G +
Sbjct: 247 WATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIR--HIAGGQHH 304
Query: 275 TFVVSEDGDVYSFGCGESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTN 334
T +++ D G E LG + D V P +V K++ E++V +
Sbjct: 305 TVILTTDLKCSVVGRPEYGRLGLGDVKD-------VVEKPTIV---KKLTEKIVSVGC-- 352
Query: 335 SIYWNAHTFALTESGKLYAFGAGDKGQLGI 364
++A+T GKLY++G+G QLG+
Sbjct: 353 ---GEVCSYAVTIDGKLYSWGSGVNNQLGV 379
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 113/286 (39%), Gaps = 62/286 (21%)
Query: 141 DVEPHPLLGTLENIP-VVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTD--E 197
D+ L + IP V I+AG + L L SG +YS GC G LG + D E
Sbjct: 60 DILERKRLSPVAGIPDAVDISAGGMHNLVLT--KSG-DIYSFGCNDEGALGRDTSEDGSE 116
Query: 198 KHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGR--YGCLGHGNEECESVPK 255
P LI+ L + + ++AG H+A + +DGRV WG R +G +G + + P
Sbjct: 117 SKPDLID----LPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP- 171
Query: 256 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH--NAIADGQGNR-HANVL 312
+ + +A+G +++ G V++ GC E LG G+G R ++L
Sbjct: 172 -IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLL 230
Query: 313 TP-QLV----------------TSLKQVNERVVQISLTNSIYWNAH-------------- 341
P QL+ T +++ +V+ + N+ AH
Sbjct: 231 RPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT 290
Query: 342 --------------TFALTESGKLYAFGAGDKGQLGIELVNNQTER 373
T LT K G + G+LG+ V + E+
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEK 336
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 230 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 289
G V G G G LG G + E ++ A+ ++ G V+++ GD+YSFGC
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILER-KRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFGC 100
Query: 290 GESASLGHNAIADGQGNRHANVLTPQLVTSLKQVNERVVQISLTNSIYWNAHTFALTESG 349
+ +LG + DG ++ P L+ + + + IS +S H+ L E G
Sbjct: 101 NDEGALGRDTSEDGSESK------PDLI----DLPGKALCISAGDS-----HSACLLEDG 145
Query: 350 KLYAFGA--GDKGQLGIELVNNQTERGNPERVDIDL 383
+++A+G+ G +G+ + N+ R IDL
Sbjct: 146 RVFAWGSFRDSHGNMGLTIDGNK-------RTPIDL 174
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 44 LQGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGE----AEYGVQGT------KLVTSPQ 93
++G A+GA ++++ AG+V+ G G+ +E + G L+ Q
Sbjct: 175 MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQ 234
Query: 94 LVESLKNIFVVQAAIGNFFTAVLSREGRV-YTFSWGNDARLGHHTEPNDVEPHPLLGTLE 152
L+ + F A N+ T + + +V + N +L H T+ + P+ L+
Sbjct: 235 LIITRAKPFEAIWAT-NYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELK 293
Query: 153 NIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHGSRTDE-KHPRLIEQFQLLNL 211
+I IA G + + L + + VG G+LG G D + P ++++ L
Sbjct: 294 DI--RHIAGGQHHTVILT---TDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKK---LTE 345
Query: 212 QPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV-KAIHVAT 270
+ V V G + V DG++ +WG G LG G+ + E P VV + N K + +A+
Sbjct: 346 KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLAS 405
Query: 271 --GDYTTFVVSED 281
G + F+V D
Sbjct: 406 GGGQHAIFLVKAD 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,546,939
Number of Sequences: 539616
Number of extensions: 6571717
Number of successful extensions: 15449
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 14083
Number of HSP's gapped (non-prelim): 495
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)