BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016727
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGA
FLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYAC
PVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHES
MGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGT
GSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDM
TVRLVINCNGMKVNAVKDVFEKSLRARLEKVNHLAYGITLVFLQISLTHGTFLAYIRQIQ
TLIITAWKVLVLTSAKIFHYLWEL

High Scoring Gene Products

Symbol, full name Information P value
FAP2
AT2G26310
protein from Arabidopsis thaliana 1.4e-62
FAP1
fatty-acid-binding protein 1
protein from Arabidopsis thaliana 1.5e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016727
        (384 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2057751 - symbol:FAP2 "fatty-acid-binding prot...   639  1.4e-62   1
TAIR|locus:2077229 - symbol:FAP1 "fatty-acid-binding prot...   170  1.5e-10   1


>TAIR|locus:2057751 [details] [associations]
            symbol:FAP2 "fatty-acid-binding protein 2" species:3702
            "Arabidopsis thaliana" [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=IEA] [GO:0005504 "fatty acid
            binding" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] InterPro:IPR016087 Pfam:PF02431 GO:GO:0009570
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005504 GO:GO:0016872
            SUPFAM:SSF54626 EMBL:AY954800 IPI:IPI00534378 RefSeq:NP_180199.3
            UniGene:At.38913 UniGene:At.68811 ProteinModelPortal:Q58G09
            SMR:Q58G09 EnsemblPlants:AT2G26310.1 GeneID:817171
            KEGG:ath:AT2G26310 TAIR:At2g26310 eggNOG:NOG274613
            HOGENOM:HOG000241741 InParanoid:Q58G09 OMA:IEFPMLL PhylomeDB:Q58G09
            ProtClustDB:PLN03175 Genevestigator:Q58G09 Uniprot:Q58G09
        Length = 398

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 155/329 (47%), Positives = 199/329 (60%)

Query:    14 DPY-ILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSN 72
             DP  +LP   FL   L    FSQ    ++PGSLA + AF+CISKFTGA L WF+ G   N
Sbjct:     5 DPNSVLPKRSFLQHEL----FSQL---HIPGSLAFE-AFSCISKFTGALLCWFSHG---N 53

Query:    73 LSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAI 132
             L + ++ +Q G    S  S   V +  +   ++  FH  S   S    P  F  +S S I
Sbjct:    54 LQKEVSKHQWGLTCKSRDSLKHVFEHRNV--SVFPFHYVSKDIS----PGFFGNISKSTI 107

Query:   133 RRLFREGGKLHXXXXXXXXXXXIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPC-EVESH 191
             +    E  +LH           IP L+ +S+  LA+PL + ++++ E++    C E   H
Sbjct:   108 QHFVNEAERLHSCSLLSLAAAMIPSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEH 167

Query:   192 R-C-------GALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSR 243
             R C         LSF  L  TR +VEPRTGIEFPM+L      EN S S SEVLV TGSR
Sbjct:   168 RTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLK-----ENASRSNSEVLVATGSR 222

Query:   244 TIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVR 303
             T+KI++IKSLKVYAF FYVHP SVC+KLG KYAS+  ++L+KC   Y+DLLREDI M+VR
Sbjct:   223 TMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVR 282

Query:   304 LVINCNGMKVNAVKDVFEKSLRARLEKVN 332
             LV+N NG+K+N V+DVFEKSLRARL K N
Sbjct:   283 LVVNYNGLKINTVRDVFEKSLRARLVKAN 311


>TAIR|locus:2077229 [details] [associations]
            symbol:FAP1 "fatty-acid-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
            [GO:0005504 "fatty acid binding" evidence=IPI] [GO:0006631 "fatty
            acid metabolic process" evidence=IMP] [GO:0009570 "chloroplast
            stroma" evidence=IDA] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 GO:GO:0005739 GO:GO:0009570 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006631 GO:GO:0009941 GO:GO:0005504
            SUPFAM:SSF54626 GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10
            EMBL:AL138648 eggNOG:NOG131481 UniGene:At.28579 UniGene:At.48805
            EMBL:AY065149 EMBL:AY081626 EMBL:AY088229 IPI:IPI00523813
            PIR:T48106 RefSeq:NP_567140.1 PDB:4DOO PDBsum:4DOO
            ProteinModelPortal:Q9M1X2 SMR:Q9M1X2 PRIDE:Q9M1X2
            EnsemblPlants:AT3G63170.1 GeneID:825492 KEGG:ath:AT3G63170
            TAIR:At3g63170 HOGENOM:HOG000242388 InParanoid:Q9M1X2 OMA:MTVRLQI
            PhylomeDB:Q9M1X2 ProtClustDB:PLN03174 ArrayExpress:Q9M1X2
            Genevestigator:Q9M1X2 Uniprot:Q9M1X2
        Length = 279

 Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 44/142 (30%), Positives = 75/142 (52%)

Query:   190 SHRCGALSFPDLSRTRHAV-EPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIV 248
             SHR     +  ++    +V EP+TG  FP  +     G+      S  L+G G R   ++
Sbjct:    60 SHRSSLSPWGSITLADESVVEPKTGFSFPASI-----GD------SRRLLGVGLRKKSLL 108

Query:   249 KIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINC 308
              +K++ VYAF  Y     V + +G KYA++  +E+     F +DL+  DI MT+RL I  
Sbjct:   109 GLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVY 168

Query:   309 NGMKVNAVKDVFEKSLRARLEK 330
               + + +V++ F++S+  RL+K
Sbjct:   169 GKLNIRSVRNAFQESVGNRLKK 190


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      384       373   0.00087  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  245 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.83u 0.13s 27.96t   Elapsed:  00:00:01
  Total cpu time:  27.83u 0.13s 27.96t   Elapsed:  00:00:01
  Start:  Mon May 20 23:20:37 2013   End:  Mon May 20 23:20:38 2013

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