Query 016727
Match_columns 384
No_of_seqs 119 out of 161
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 18:26:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4doi_A Chalcone--flavonone iso 100.0 1.9E-42 6.5E-47 328.0 12.5 179 192-383 6-205 (246)
2 4doo_A Chalcone-flavanone isom 100.0 1.6E-41 5.5E-46 310.9 15.8 168 205-383 3-184 (205)
3 4dok_A Similarity to chalcone- 100.0 4.5E-41 1.5E-45 311.3 14.0 166 203-383 2-188 (208)
4 1eyq_A Chalcone-flavonone isom 100.0 5.3E-39 1.8E-43 299.4 14.1 171 201-383 3-194 (222)
5 4dol_A AT1G53520, 94270-95700, 100.0 1.4E-37 4.8E-42 286.4 13.8 170 204-383 11-197 (217)
6 3euk_L Chromosome partition pr 16.6 69 0.0024 30.3 2.5 82 259-352 100-196 (238)
7 3zqk_A VON willebrand factor; 10.6 85 0.0029 26.7 1.2 19 251-269 146-166 (199)
8 1cmb_A Met APO-repressor; DNA- 7.7 1.3E+02 0.0046 24.8 1.1 16 368-383 53-68 (104)
9 2daj_A KIAA0977 protein, COBL- 7.4 1.6E+02 0.0055 24.1 1.5 11 299-309 8-18 (91)
10 2ldu_A Heat shock factor prote 7.1 2.3E+02 0.0079 23.7 2.4 29 354-382 36-64 (125)
No 1
>4doi_A Chalcone--flavonone isomerase 1; chalcone-flavanone isomerase; 1.55A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-42 Score=328.00 Aligned_cols=179 Identities=14% Similarity=0.187 Sum_probs=156.1
Q ss_pred cCCCCCCCCCCCCcceecCCCCcccCceecccccCCCCCCCCcceEEeeeeeeeEEeeeeeeEEEEEEEEecchhhhhhh
Q 016727 192 RCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKL 271 (384)
Q Consensus 192 ~~~~~~~p~~~~t~~vVEPkTGI~FP~~L~~~~~g~~~ss~~sl~LvGaGVR~ksI~gik~IKVYAiGvYvD~~alk~~L 271 (384)
.|++++.| ++.+.+.|| ||+||+.+ ++|++.++++|+|+|+|+|+|++ ++|||||||+|+|++++. +|
T Consensus 6 ~~~~~~~~-~~~~~v~V~---gV~FP~~v------~~p~~~~~L~L~GaGvR~k~I~~-~~vKvYAiGlYl~~~~~~-~L 73 (246)
T 4doi_A 6 ACASPSPF-PAVTKLHVD---SVTFVPSV------KSPASSNPLFLGGAGVRGLDIQG-KFVIFTVIGVYLEGNAVP-SL 73 (246)
T ss_dssp ----------CCCCEEET---TEEECSEE------ECTTTCCEEEEEEEEEEEEEETT-EEEEEEEEEEEECTTHHH-HH
T ss_pred ccccCCCC-CccceeEEC---ceECCCee------ccCCCCCceeEecceeeceeeee-eEEEEEEEEEEechhHHH-Hh
Confidence 45555554 588899999 99999999 46777889999999999999998 699999999999998654 59
Q ss_pred CCccCCCChhhhcccchhHHHHhccCcceEEEEEEEeccccchhHHHHHHHHHHHHHhhcC---ccc---ccc-cccccC
Q 016727 272 GPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKVN---HLA---YGI-TLVFLQ 344 (384)
Q Consensus 272 ~~Kwkgksa~EL~~~~dFf~dLl~~~~ektvRLVivyskVs~n~vrdAfeeSLg~RLkk~~---~~e---Le~-ks~Fk~ 344 (384)
++||+|++++||.++.+||+||+++|++|++||+|+| .++..++++||++++++||++.+ ++| |++ .++|++
T Consensus 74 ~~kwkgk~~~eL~~~~~ff~~il~~p~eK~lrl~~ir-~l~g~~~~~al~e~l~~rlk~~g~~~~~e~~aL~~F~~~F~~ 152 (246)
T 4doi_A 74 SVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKL-PLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKE 152 (246)
T ss_dssp HHHHTTCCHHHHHHCHHHHHHHHHCSSCEEEEEEESS-CEEHHHHHHHHTTTHHHHHHHHTCCCHHHHHHHHHHHHHHTT
T ss_pred hhhhcCCCHHHhcccHHHHHHHHcCCcceEEEEEEEe-cCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999997 69999999999999999998854 333 777 999999
Q ss_pred ccCCCCCeEEEEEccCCeEEE--------------EEecchhhHHHHHHhhcc
Q 016727 345 ISLTHGTFLAYIRQIQTLIIT--------------AWKVLVLTSAKIFHYLWE 383 (384)
Q Consensus 345 ~~lpkGs~I~ft~sp~GkLv~--------------~IEsk~L~~Alfd~Yl~~ 383 (384)
++||||++|+|+|+|+|.+++ +|+|+.||+|||+.|||+
T Consensus 153 ~~l~kGs~I~~~~~p~g~l~i~~s~~G~~p~~~~~~I~s~~l~~All~~ylG~ 205 (246)
T 4doi_A 153 ETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGK 205 (246)
T ss_dssp CEECTTCEEEEEECTTSEEEEEEESSSCCCSSCSEEEECHHHHHHHHHHHHST
T ss_pred CcCCCCCEEEEEEeCCCcEEEEEecCCccccccccccCCHHHHHHHHHHhcCC
Confidence 999999999999999987643 689999999999999997
No 2
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-41 Score=310.94 Aligned_cols=168 Identities=27% Similarity=0.479 Sum_probs=155.5
Q ss_pred cceecCCCCcccCceecccccCCCCCCCCcceEEeeeeeeeEEeeeeeeEEEEEEEEecchhhhhhhCCccCCCChhhhc
Q 016727 205 RHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELN 284 (384)
Q Consensus 205 ~~vVEPkTGI~FP~~L~~~~~g~~~ss~~sl~LvGaGVR~ksI~gik~IKVYAiGvYvD~~alk~~L~~Kwkgksa~EL~ 284 (384)
..+|||+||++||+.++ .+++|+|+|+|+++|+|+|+|||||+|+|+++++++.+|+.||+|++++||+
T Consensus 3 ~~~vep~tgv~FP~~~~-----------~~~~L~G~GvR~~~i~~~~~ikvYa~GlYl~~~~~~~~L~~k~~~~~~~el~ 71 (205)
T 4doo_A 3 ESVVEPKTGFSFPASIG-----------DSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIR 71 (205)
T ss_dssp CCEECTTTCCEECSEET-----------TTEEEEEEEEEEEECSTTCEEEEEEEEEEEEHHHHHHHHHHHSTTCCHHHHH
T ss_pred CccccCCcCCcCCCccC-----------CCceEEEeeeeEEEEeeccceEEEEEEEEeCHHHHHHHHHhhhcCCCHHHHc
Confidence 46899999999999994 2479999999999999988999999999999999998899999999999999
Q ss_pred ccchhHHHHhccCcceEEEEEEEeccccchhHHHHHHHHHHHHHhhcCccc----ccc-ccccc-CccCCCCCeEEEEEc
Q 016727 285 KCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKVNHLA----YGI-TLVFL-QISLTHGTFLAYIRQ 358 (384)
Q Consensus 285 ~~~dFf~dLl~~~~ektvRLVivyskVs~n~vrdAfeeSLg~RLkk~~~~e----Le~-ks~Fk-~~~lpkGs~I~ft~s 358 (384)
++++||++|+++|++|++||+|+|++++.+++++||++++++|+++++.++ +++ +++|+ +++||||+.|+|+++
T Consensus 72 ~~~~~~~~il~~~~~k~iri~~~~~~i~~~~~~da~~~~i~~~~~~~~~~~~~~~l~~f~~~F~~~~~~~kGd~i~~~~~ 151 (205)
T 4doo_A 72 GNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKD 151 (205)
T ss_dssp TCTTHHHHHHHSCCCEEEEEEECCSCCCHHHHHHHHHHHHHHHHHHHSCSCCHHHHHHHHGGGTTCCCCCTTCEEEEEEE
T ss_pred ccHHHHHHHHcCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhccCCCCCCCCEEEEEEc
Confidence 999999999999999999999998789999999999999999999988542 777 99999 789999999999999
Q ss_pred cCCe--------EEEEEecchhhHHHHHHhhcc
Q 016727 359 IQTL--------IITAWKVLVLTSAKIFHYLWE 383 (384)
Q Consensus 359 p~Gk--------Lv~~IEsk~L~~Alfd~Yl~~ 383 (384)
|+|. ..++|+|+.||+|+|+.|||+
T Consensus 152 p~~~l~~~~~g~~~g~I~~~~f~~al~~iwLG~ 184 (205)
T 4doo_A 152 PGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGE 184 (205)
T ss_dssp TTTEEEEEETTEEEEEEECHHHHHHHHHHHHSS
T ss_pred CCCcEEEEECCeeeEEECCHHHHHHHHHHHcCC
Confidence 8765 456999999999999999996
No 3
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=100.00 E-value=4.5e-41 Score=311.26 Aligned_cols=166 Identities=18% Similarity=0.219 Sum_probs=151.9
Q ss_pred CCcceecCCCCcccCceecccccCCCCCCCCcceEEeeeeeeeEEeeeeeeEEEEEEEEecchhhhhhhCCccCCCChhh
Q 016727 203 RTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAE 282 (384)
Q Consensus 203 ~t~~vVEPkTGI~FP~~L~~~~~g~~~ss~~sl~LvGaGVR~ksI~gik~IKVYAiGvYvD~~alk~~L~~Kwkgksa~E 282 (384)
.+.+.|| ||+||+.++ +.++++|+|+|+|+|+|++ ++|||||||+|+|+++++.+| +||+|++++|
T Consensus 2 ~~~~~v~---gv~FP~~~~---------~~~~L~L~GaGvR~~~I~~-~~iKvYa~GlYl~~~~~~~~l-~kwk~~~~~e 67 (208)
T 4dok_A 2 TGMVMVH---EVPFPPQII---------TSKPLSLLGQGITDIEIHF-LQVKFTAIGVYLDPSDVKTHL-DNWKGKTGKE 67 (208)
T ss_dssp CCCEEET---TEEECSEEE---------SSSEEEEEEEEEEEEEETT-EEEEEEEEEEEECHHHHHHHC-GGGTTCCHHH
T ss_pred CccEEEc---cEECCcccc---------CCCcceeeeeeeeeEeeee-eEEEEEEEEEEecHHHHHHHH-hhhcCCCHHH
Confidence 4567899 999999993 3468999999999999998 699999999999998899988 8999999999
Q ss_pred hcccchhHHHHhccCcceEEEEEEEeccccchhHHHHHHHHHHHHHhhcCc---cc---ccc-cccccCccCCCCCeEEE
Q 016727 283 LNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKVNH---LA---YGI-TLVFLQISLTHGTFLAY 355 (384)
Q Consensus 283 L~~~~dFf~dLl~~~~ektvRLVivyskVs~n~vrdAfeeSLg~RLkk~~~---~e---Le~-ks~Fk~~~lpkGs~I~f 355 (384)
|.++++||+||+++|++|++||+|.+ .++.+++++||++++++||++.+. +| |++ +++|++++||||++|+|
T Consensus 68 L~~~~~f~~~ii~~p~eK~iri~~ir-~l~g~~~~~a~~e~~~~~~~~~~~~~~~e~~aL~~f~~~F~~~~~~~G~~I~~ 146 (208)
T 4dok_A 68 LAGDDDFFDALASAEMEKVIRVVVIK-EIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVGFFQSKYFKANSVITY 146 (208)
T ss_dssp HHTCHHHHHHHHHSSSCEEEEEEESS-CEEHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHTCEECTTCEEEE
T ss_pred HccchHHHHHHhcCcccceEEEEEEe-cCCcHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHhccCCCCCCCEEEE
Confidence 99999999999999999999999997 699999999999999999998773 32 777 99999999999999999
Q ss_pred EEccC-CeEE------------EEEecchhhHHHHHHhh-cc
Q 016727 356 IRQIQ-TLII------------TAWKVLVLTSAKIFHYL-WE 383 (384)
Q Consensus 356 t~sp~-GkLv------------~~IEsk~L~~Alfd~Yl-~~ 383 (384)
+|+|+ |.|. ++|+|+.||+|+|+.|| |+
T Consensus 147 ~~~p~~G~L~i~~s~~G~~~~~~~I~~~~l~~All~~yl~G~ 188 (208)
T 4dok_A 147 HFSAKDGICEIGFETEGKEEEKLKVENANVVGMMQRWYLSGS 188 (208)
T ss_dssp EECSSSCCEEEEEECTTSCCEEEEECCHHHHHHHHHHHSCTT
T ss_pred EEeCCCCeEEEEEEeCCEeccccccCCHHHHHHHHHHeeCCC
Confidence 99988 8764 26999999999999999 86
No 4
>1eyq_A Chalcone-flavonone isomerase 1; chalcone isomerase, flavonoid; HET: NAR; 1.85A {Medicago sativa} SCOP: d.36.1.1 PDB: 1eyp_A* 1fm7_A* 1fm8_A* 1jep_A* 1jx0_A* 1jx1_A*
Probab=100.00 E-value=5.3e-39 Score=299.44 Aligned_cols=171 Identities=20% Similarity=0.233 Sum_probs=153.6
Q ss_pred CCCCcceecCCCCcccCceecccccCCCCCCCCcceEEeeeeeeeEEeeeeeeEEEEEEEEecchhhhhhhCCccCCCCh
Q 016727 201 LSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISV 280 (384)
Q Consensus 201 ~~~t~~vVEPkTGI~FP~~L~~~~~g~~~ss~~sl~LvGaGVR~ksI~gik~IKVYAiGvYvD~~alk~~L~~Kwkgksa 280 (384)
++.+.+.|+ |++||+.+ +.|++.++++|.|+|+|+|.|++ ++|||||+|+|+|++++++ |+.||+|+++
T Consensus 3 ~~~~~v~v~---gv~FP~~~------~~p~~~~~L~L~GaGvR~k~i~~-~~iKvYa~GlYl~~~~~~~-L~~k~kg~~a 71 (222)
T 1eyq_A 3 ASITAITVE---NLEYPAVV------TSPVTGKSYFLGGAGERGLTIEG-NFIKFTAIGVYLEDIAVAS-LAAKWKGKSS 71 (222)
T ss_dssp -CCCCEEET---TEEECSEE------ECTTTCCEEEEEEEEEEEEEETT-EEEEEEEEEEEEETTHHHH-HHHHHTTCCH
T ss_pred CccccEEEc---ceECCCcc------ccCCCCCceEEeeeEEEEEEeec-eEEEEEEEEEEeCHHHhhH-hhhhhcCCCH
Confidence 456677787 99999999 45667789999999999999997 8999999999999986655 9999999999
Q ss_pred hhhcccchhHHHHhccCcceEEEEEEEeccccchhHHHHHHHHHHHHHhhcC---ccc---ccc-cccccCccCCCCCeE
Q 016727 281 AELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKVN---HLA---YGI-TLVFLQISLTHGTFL 353 (384)
Q Consensus 281 ~EL~~~~dFf~dLl~~~~ektvRLVivyskVs~n~vrdAfeeSLg~RLkk~~---~~e---Le~-ks~Fk~~~lpkGs~I 353 (384)
+||.++++||++|+++|++|++||+|++ +++..++++||+|++++|+++.+ +++ |++ +++|++.+||||++|
T Consensus 72 ~el~~~~~f~~~li~~~~~k~irl~~i~-~v~g~~~~~a~~e~~~~~~~~~g~~~~~e~~~L~~f~~~F~~~~~~kG~~i 150 (222)
T 1eyq_A 72 EELLETLDFYRDIISGPFEKLIRGSKIR-ELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASV 150 (222)
T ss_dssp HHHHTCHHHHHHHHHCSSCEEEEEEESS-CEEHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCEECTTCEE
T ss_pred HHhcccHHHHHHHHcCCCceEEEEEEEe-CCCHHHHHHHHHHHHHHHHhccCccccchHHHHHHHHHHhCCCCCCCCCEE
Confidence 9999999999999999999999999997 59999999999999999998754 332 777 999998899999999
Q ss_pred EEEEccCCeEE--------------EEEecchhhHHHHHHhhcc
Q 016727 354 AYIRQIQTLII--------------TAWKVLVLTSAKIFHYLWE 383 (384)
Q Consensus 354 ~ft~sp~GkLv--------------~~IEsk~L~~Alfd~Yl~~ 383 (384)
+|+|+|+|.+. ++|+|+.||+|+|+.|||+
T Consensus 151 ~~~~~p~g~l~is~~~~g~~p~~~~~~I~~~~~~~Al~~i~lG~ 194 (222)
T 1eyq_A 151 FYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGE 194 (222)
T ss_dssp EEEEETTTEEEEEEESSSSCCSSCSEEEECHHHHHHHHHHHHST
T ss_pred EEEEcCCCceEEEEEeCCccccccccccCCHHHHHHHHHHhhCC
Confidence 99999998653 3689999999999999996
No 5
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-37 Score=286.43 Aligned_cols=170 Identities=17% Similarity=0.258 Sum_probs=154.3
Q ss_pred CcceecCCCCcccCceecccccCCCCCCCCcceEEeeeeeeeEEeeeeeeEEEEEEEEecchhhhhhhCCccCCCChhhh
Q 016727 204 TRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAEL 283 (384)
Q Consensus 204 t~~vVEPkTGI~FP~~L~~~~~g~~~ss~~sl~LvGaGVR~ksI~gik~IKVYAiGvYvD~~alk~~L~~Kwkgksa~EL 283 (384)
.+++|||+||++||+.+ +.+++.++++|+|+|+|+|.|.+ ++|||||+|+|+++++++. |+ ||+|++++||
T Consensus 11 ~~~v~e~~tgv~fp~~~------~~~~~~~~l~L~G~GvR~~~i~~-~~ikvYa~glYl~~~~~~~-L~-~~~~~~~~el 81 (217)
T 4dol_A 11 EDYAEETATSVKFKRSV------TLPGCSSPLSLLGTGFREKKFAI-IGVKVYAAGYYVNESILSG-LS-AWTGRSADEI 81 (217)
T ss_dssp CCEEECTTTCCEEESEE------CCTTCSSCEEEEEEEEEEEESSS-SEEEEEEEEEEECGGGTGG-GG-GGTTCCHHHH
T ss_pred cceeecCCCCccCCCcc------cCCCCCCceEEEEEEEEEEEEee-eEEEEEEEEEEcCHHHHHH-HH-hhcCCCHHHH
Confidence 44899999999999999 45666789999999999999987 6999999999999998776 87 9999999999
Q ss_pred cccchhHHHHhccCcceEEEEEEEeccccchhHHHHHHHHHHHHHhhcCcc--c-ccc-cccccCccCCCCCeEEEEEcc
Q 016727 284 NKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKVNHL--A-YGI-TLVFLQISLTHGTFLAYIRQI 359 (384)
Q Consensus 284 ~~~~dFf~dLl~~~~ektvRLVivyskVs~n~vrdAfeeSLg~RLkk~~~~--e-Le~-ks~Fk~~~lpkGs~I~ft~sp 359 (384)
+++++||++|+++|++|++||++.|+ ++.+++++|+++++.+|+++.+.+ + +++ .++|+++++|||+.|+|+++|
T Consensus 82 ~~~~~~~~~il~~~~~k~lri~~~R~-i~~~~l~~a~~e~i~~~~~~~~~~~~~~l~~f~~~F~d~~v~kGd~i~~~~~p 160 (217)
T 4dol_A 82 QRDSSLFVSIFQAQAEKSLQIVLVRD-VDGKTFWDALDEAISPRIKSPSSEDTTALSTFCCIFQNRPLNKGSVILLTWIN 160 (217)
T ss_dssp HTCHHHHHHHHHSSSCEEEEEEESSC-BCHHHHHHHHHHHHTTTCSSCCHHHHHHHHHHHHHHTTCCBCTTCEEEEEEEE
T ss_pred cccHHHHHHHHcCCCceEEEEEEEec-CCHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhCCCcCCCCCEEEEEEcC
Confidence 99999999999999999999999985 999999999999999999887742 2 777 999999999999999999998
Q ss_pred CCeE-------------EEEEecchhhHHHHHHhhcc
Q 016727 360 QTLI-------------ITAWKVLVLTSAKIFHYLWE 383 (384)
Q Consensus 360 ~GkL-------------v~~IEsk~L~~Alfd~Yl~~ 383 (384)
+|.+ .++|+|+.||+|+|+.|||+
T Consensus 161 ~~~l~i~~~~~g~~~~~~g~I~~~~f~~A~~~iwLG~ 197 (217)
T 4dol_A 161 TSNMLVSVSSGGLPTNVDATIESGNVTSALFDVFFGD 197 (217)
T ss_dssp TTEEEEEEESSSCCCSCCEEEECHHHHHHHHHHHHSS
T ss_pred CCCEEEEEeCCCccccceeEeCCHHHHHHHHHHHcCC
Confidence 7653 35789999999999999996
No 6
>3euk_L Chromosome partition protein MUKE; MUKB, MUKF, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 4.00A {Haemophilus ducreyi}
Probab=16.60 E-value=69 Score=30.35 Aligned_cols=82 Identities=18% Similarity=0.286 Sum_probs=40.6
Q ss_pred EEEecchhhhhhhCCccCCCChhhhcccchhHHHHhc-cCcceEEEEEEEec---cccchhHHHHHHHHHHHHHhhcC--
Q 016727 259 AFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLR-EDIDMTVRLVINCN---GMKVNAVKDVFEKSLRARLEKVN-- 332 (384)
Q Consensus 259 GvYvD~~alk~~L~~Kwkgksa~EL~~~~dFf~dLl~-~~~ektvRLVivys---kVs~n~vrdAfeeSLg~RLkk~~-- 332 (384)
-+|++|+.+.. ..| -..++.|+.|+. .+-++.+|++-+|+ ..+-+++++-..+|| .||+.++
T Consensus 100 ~lYLsperLa~---~gi--------ft~~eL~eeL~~l~dE~kLlkl~~~R~~GSDlD~~kl~ekv~ksL-rrL~Rlg~I 167 (238)
T 3euk_L 100 YLYLSPERLAQ---QGI--------FSQDDVYEELLNLADENKLLKAVNPRSTGSDLDRAKLAEKVGGAL-RRLARIGII 167 (238)
T ss_dssp HHHTSTTSGGG---TTC--------BCSHHHHHHHHC---------------------CCSHHHHHHHHH-HHHHHTTSE
T ss_pred HHHcCHHHHhc---CCc--------ccHHHHHHHHHHhhCHHHHHHHHhccCCCchhhHHHHHHHHHHHH-HHHHhcCcE
Confidence 36788755433 122 124568888874 67789999998664 567788999999999 5788887
Q ss_pred ---c--cc--ccc-ccccc-CccCCCCCe
Q 016727 333 ---H--LA--YGI-TLVFL-QISLTHGTF 352 (384)
Q Consensus 333 ---~--~e--Le~-ks~Fk-~~~lpkGs~ 352 (384)
. ++ ++- .++|. ...+.-|+.
T Consensus 168 ~~~~~~d~~kf~iteAvfRF~a~vR~~~d 196 (238)
T 3euk_L 168 TRVGEQNSKKFIISEAVFRFGADVRAGDD 196 (238)
T ss_dssp EEC------CEEECGGGTTSCCCCSSSSC
T ss_pred EeecCCCcceEEecHHHHhhccccccCCC
Confidence 1 22 333 67777 666655543
No 7
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=10.62 E-value=85 Score=26.71 Aligned_cols=19 Identities=5% Similarity=0.123 Sum_probs=13.6
Q ss_pred eeeEEEEEEE--Eecchhhhh
Q 016727 251 KSLKVYAFAF--YVHPRSVCE 269 (384)
Q Consensus 251 k~IKVYAiGv--YvD~~alk~ 269 (384)
.+|+||+||+ .+|.+.++.
T Consensus 146 ~~v~v~~iGiG~~~~~~~L~~ 166 (199)
T 3zqk_A 146 GDIQVVPIGVGPNANVQELER 166 (199)
T ss_dssp TTEEEEEEEESTTCCHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHH
Confidence 3689999998 456655555
No 8
>1cmb_A Met APO-repressor; DNA-binding regulatory protein; 1.80A {Escherichia coli} SCOP: a.43.1.5 PDB: 1cma_A 1cmc_A* 1mjl_A* 1mj2_A 1mjk_A* 1mjm_A 1mjo_A* 1mjp_A 1mjq_A*
Probab=7.70 E-value=1.3e+02 Score=24.79 Aligned_cols=16 Identities=13% Similarity=0.106 Sum_probs=12.3
Q ss_pred ecchhhHHHHHHhhcc
Q 016727 368 KVLVLTSAKIFHYLWE 383 (384)
Q Consensus 368 Esk~L~~Alfd~Yl~~ 383 (384)
.|.+||+|++-+|-|.
T Consensus 53 NSELLCEAFLHA~TGQ 68 (104)
T 1cmb_A 53 NSELLCEAFLHAFTGQ 68 (104)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHhcCC
Confidence 3578888888888764
No 9
>2daj_A KIAA0977 protein, COBL-like 1; ubiquitin-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=7.42 E-value=1.6e+02 Score=24.10 Aligned_cols=11 Identities=55% Similarity=0.754 Sum_probs=9.7
Q ss_pred ceEEEEEEEec
Q 016727 299 DMTVRLVINCN 309 (384)
Q Consensus 299 ektvRLVivys 309 (384)
|+|+|++++|.
T Consensus 8 E~TvRLvVNy~ 18 (91)
T 2daj_A 8 EKTVRVVINFK 18 (91)
T ss_dssp CSCEEEEEEET
T ss_pred ccEEEEEEeec
Confidence 69999999875
No 10
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=7.11 E-value=2.3e+02 Score=23.70 Aligned_cols=29 Identities=3% Similarity=-0.092 Sum_probs=25.3
Q ss_pred EEEEccCCeEEEEEecchhhHHHHHHhhc
Q 016727 354 AYIRQIQTLIITAWKVLVLTSAKIFHYLW 382 (384)
Q Consensus 354 ~ft~sp~GkLv~~IEsk~L~~Alfd~Yl~ 382 (384)
.+.|+++|.-.+++..+.+++.++--||.
T Consensus 36 iI~W~~~G~sFvV~d~~~F~~~vLp~yFk 64 (125)
T 2ldu_A 36 LICWSPSGNSFHVFDQGQFAKEVLPKYFK 64 (125)
T ss_dssp TEEECTTSSEEEECCHHHHHHHHHHHHSS
T ss_pred EEEEcCCCCEEEEeCHHHHHHHHhHHhcC
Confidence 46899999988888889999999998874
Done!