Query 016730
Match_columns 384
No_of_seqs 371 out of 2788
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 18:29:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ixk_A Methyltransferase; open 100.0 2.1E-65 7.3E-70 498.4 28.4 308 66-383 8-315 (315)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 4.8E-63 1.6E-67 502.4 22.0 294 71-383 5-303 (456)
3 3m6w_A RRNA methylase; rRNA me 100.0 1.7E-62 5.7E-67 499.1 23.6 296 74-383 2-300 (464)
4 2frx_A Hypothetical protein YE 100.0 3.3E-61 1.1E-65 493.0 25.7 299 71-383 5-311 (479)
5 2yxl_A PH0851 protein, 450AA l 100.0 1E-60 3.5E-65 486.6 26.3 299 66-383 149-449 (450)
6 1sqg_A SUN protein, FMU protei 100.0 2.8E-60 9.7E-65 480.6 28.5 321 36-383 98-429 (429)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 5.2E-59 1.8E-63 452.2 25.1 272 99-383 7-301 (309)
8 4fzv_A Putative methyltransfer 100.0 6.8E-58 2.3E-62 451.4 20.6 294 81-383 26-358 (359)
9 3ajd_A Putative methyltransfer 100.0 7.5E-52 2.6E-56 395.0 22.0 270 95-383 2-274 (274)
10 4dmg_A Putative uncharacterize 99.8 1.5E-19 5.3E-24 180.3 9.5 163 151-337 189-355 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.8 1.8E-18 6E-23 160.8 13.5 133 175-338 73-213 (232)
12 1wxx_A TT1595, hypothetical pr 99.7 2.3E-18 7.8E-23 171.1 7.5 163 151-337 186-354 (382)
13 2as0_A Hypothetical protein PH 99.7 2.1E-17 7.1E-22 164.8 11.4 159 153-332 194-357 (396)
14 3lpm_A Putative methyltransfer 99.7 1.7E-16 6E-21 148.8 17.1 166 157-337 20-197 (259)
15 2b3t_A Protein methyltransfera 99.7 1.3E-17 4.6E-22 157.8 7.2 141 177-333 108-255 (276)
16 3c0k_A UPF0064 protein YCCW; P 99.7 5.6E-18 1.9E-22 169.0 3.6 167 149-337 194-368 (396)
17 2dul_A N(2),N(2)-dimethylguano 99.7 7.2E-18 2.4E-22 167.5 3.9 169 178-382 47-232 (378)
18 1yb2_A Hypothetical protein TA 99.7 1.8E-18 6E-23 164.0 -1.0 204 94-337 28-233 (275)
19 1i1n_A Protein-L-isoaspartate 99.7 3.2E-16 1.1E-20 143.2 13.5 170 112-323 6-193 (226)
20 3v97_A Ribosomal RNA large sub 99.7 1.4E-17 4.9E-22 177.4 4.4 174 135-338 504-679 (703)
21 3u81_A Catechol O-methyltransf 99.7 1.8E-16 6.1E-21 145.0 11.0 168 162-382 42-214 (221)
22 3tfw_A Putative O-methyltransf 99.6 6.3E-16 2.1E-20 144.4 11.6 121 167-316 52-174 (248)
23 2b78_A Hypothetical protein SM 99.6 1.4E-16 4.8E-21 158.5 6.5 166 151-337 187-358 (385)
24 3duw_A OMT, O-methyltransferas 99.6 4E-16 1.4E-20 142.4 8.4 121 167-316 47-171 (223)
25 3tma_A Methyltransferase; thum 99.6 1.3E-14 4.3E-19 142.4 18.1 159 151-337 171-335 (354)
26 2igt_A SAM dependent methyltra 99.6 3E-16 1E-20 153.2 5.9 166 152-336 126-299 (332)
27 3axs_A Probable N(2),N(2)-dime 99.6 7.7E-17 2.6E-21 160.5 0.6 173 177-382 51-226 (392)
28 2frn_A Hypothetical protein PH 99.6 4.9E-15 1.7E-19 140.8 12.8 127 176-337 123-253 (278)
29 3njr_A Precorrin-6Y methylase; 99.6 9.9E-15 3.4E-19 132.3 14.2 132 169-339 46-178 (204)
30 1nv8_A HEMK protein; class I a 99.6 5E-16 1.7E-20 148.3 5.3 221 77-326 22-260 (284)
31 2gpy_A O-methyltransferase; st 99.6 1.5E-15 5.1E-20 139.7 7.0 128 158-315 34-163 (233)
32 3e05_A Precorrin-6Y C5,15-meth 99.6 1.8E-14 6.1E-19 129.7 13.5 140 158-333 21-160 (204)
33 4df3_A Fibrillarin-like rRNA/T 99.6 1.3E-14 4.5E-19 134.6 12.5 124 159-312 51-182 (233)
34 3mti_A RRNA methylase; SAM-dep 99.6 1.3E-14 4.4E-19 128.3 11.7 131 176-327 20-153 (185)
35 3evz_A Methyltransferase; NYSG 99.5 3E-14 1E-18 130.3 12.7 150 176-339 53-204 (230)
36 3k6r_A Putative transferase PH 99.5 2.7E-14 9.3E-19 135.9 12.6 125 176-335 123-251 (278)
37 2qm3_A Predicted methyltransfe 99.5 5.5E-14 1.9E-18 139.0 14.4 154 152-337 145-305 (373)
38 3r3h_A O-methyltransferase, SA 99.5 2.1E-15 7.1E-20 140.6 3.6 127 160-315 42-173 (242)
39 3eey_A Putative rRNA methylase 99.5 6.1E-14 2.1E-18 125.2 13.0 125 175-317 19-144 (197)
40 3c3y_A Pfomt, O-methyltransfer 99.5 1.9E-14 6.5E-19 133.4 9.2 122 165-315 57-184 (237)
41 2ozv_A Hypothetical protein AT 99.5 1.8E-13 6.3E-18 128.6 13.7 138 166-312 24-170 (260)
42 4dzr_A Protein-(glutamine-N5) 99.5 4.8E-15 1.7E-19 133.0 2.5 151 177-336 29-187 (215)
43 3p9n_A Possible methyltransfer 99.5 2.6E-13 9E-18 120.6 13.3 113 177-316 43-157 (189)
44 3bt7_A TRNA (uracil-5-)-methyl 99.5 1.1E-13 3.9E-18 136.6 10.9 102 179-315 214-329 (369)
45 1yzh_A TRNA (guanine-N(7)-)-me 99.5 8.3E-13 2.8E-17 119.8 14.8 140 177-338 40-179 (214)
46 3a27_A TYW2, uncharacterized p 99.5 8.7E-14 3E-18 131.8 8.5 109 174-317 115-223 (272)
47 3dou_A Ribosomal RNA large sub 99.5 1.1E-13 3.7E-18 124.4 8.6 123 176-330 23-154 (191)
48 1inl_A Spermidine synthase; be 99.5 9E-14 3.1E-18 133.4 8.3 132 177-331 89-226 (296)
49 3mb5_A SAM-dependent methyltra 99.5 1E-13 3.5E-18 128.9 8.4 127 169-332 84-211 (255)
50 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.1E-12 3.9E-17 114.4 14.3 133 170-338 17-150 (178)
51 1o54_A SAM-dependent O-methylt 99.4 3.8E-13 1.3E-17 127.1 12.0 132 170-338 104-236 (277)
52 2ift_A Putative methylase HI07 99.4 2.5E-13 8.6E-18 122.6 10.0 110 178-316 53-167 (201)
53 1nt2_A Fibrillarin-like PRE-rR 99.4 9.1E-13 3.1E-17 120.1 13.5 132 174-338 53-192 (210)
54 3gdh_A Trimethylguanosine synt 99.4 1.3E-13 4.5E-18 127.0 7.8 94 167-266 67-161 (241)
55 3dr5_A Putative O-methyltransf 99.4 1.4E-13 4.8E-18 126.5 7.7 113 174-315 52-166 (221)
56 3g89_A Ribosomal RNA small sub 99.4 2E-13 6.9E-18 127.8 8.6 130 176-337 78-208 (249)
57 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.2E-12 4E-17 121.4 13.4 132 170-337 88-220 (258)
58 1sui_A Caffeoyl-COA O-methyltr 99.4 1.2E-13 4.2E-18 129.0 6.7 121 163-312 64-190 (247)
59 2yx1_A Hypothetical protein MJ 99.4 3.9E-13 1.3E-17 131.2 10.5 101 177-316 194-295 (336)
60 2fca_A TRNA (guanine-N(7)-)-me 99.4 6.7E-13 2.3E-17 120.9 10.9 117 177-312 37-153 (213)
61 1uwv_A 23S rRNA (uracil-5-)-me 99.4 3.5E-12 1.2E-16 128.7 16.9 87 173-262 281-369 (433)
62 3tr6_A O-methyltransferase; ce 99.4 1.4E-13 4.8E-18 125.4 5.9 120 167-315 53-177 (225)
63 3ntv_A MW1564 protein; rossman 99.4 4.6E-13 1.6E-17 123.4 9.0 120 163-313 56-177 (232)
64 3grz_A L11 mtase, ribosomal pr 99.4 1.2E-12 4.1E-17 117.6 11.3 125 176-338 58-182 (205)
65 3dh0_A SAM dependent methyltra 99.4 6.3E-12 2.1E-16 113.6 15.5 141 170-338 29-178 (219)
66 3fpf_A Mtnas, putative unchara 99.4 1.7E-12 5.8E-17 124.2 12.3 106 173-312 117-222 (298)
67 3tm4_A TRNA (guanine N2-)-meth 99.4 1.8E-12 6E-17 128.3 12.6 155 153-337 187-348 (373)
68 1xdz_A Methyltransferase GIDB; 99.4 1.1E-12 3.7E-17 121.3 10.2 131 175-337 67-198 (240)
69 1wy7_A Hypothetical protein PH 99.4 3.5E-12 1.2E-16 114.5 12.6 126 175-337 46-171 (207)
70 1i9g_A Hypothetical protein RV 99.4 2.3E-12 7.9E-17 121.3 11.7 130 169-333 90-222 (280)
71 2fpo_A Methylase YHHF; structu 99.4 1.7E-12 5.7E-17 117.2 10.1 112 178-317 54-165 (202)
72 2pbf_A Protein-L-isoaspartate 99.4 6.6E-12 2.3E-16 114.5 13.7 105 175-313 77-194 (227)
73 3f4k_A Putative methyltransfer 99.4 1.1E-11 3.8E-16 114.7 15.2 133 175-338 43-193 (257)
74 3lbf_A Protein-L-isoaspartate 99.4 2.8E-12 9.5E-17 115.5 10.7 120 158-314 57-176 (210)
75 3vc1_A Geranyl diphosphate 2-C 99.4 1.3E-11 4.3E-16 118.6 16.0 138 170-338 108-266 (312)
76 1dus_A MJ0882; hypothetical pr 99.4 4.4E-12 1.5E-16 111.5 11.8 117 168-315 42-160 (194)
77 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.8E-12 6.1E-17 120.4 9.5 117 177-312 48-173 (246)
78 1vl5_A Unknown conserved prote 99.3 9.5E-12 3.3E-16 115.8 14.3 132 151-313 10-141 (260)
79 1xxl_A YCGJ protein; structura 99.3 7.1E-12 2.4E-16 115.5 13.3 121 163-314 6-126 (239)
80 2h00_A Methyltransferase 10 do 99.3 1.5E-11 5E-16 114.3 15.2 148 178-336 65-233 (254)
81 3kkz_A Uncharacterized protein 99.3 9E-12 3.1E-16 116.5 13.6 132 176-338 44-193 (267)
82 1dl5_A Protein-L-isoaspartate 99.3 3.9E-12 1.3E-16 122.9 11.2 91 169-261 66-156 (317)
83 3kr9_A SAM-dependent methyltra 99.3 1.2E-11 4.1E-16 114.0 14.0 127 176-338 13-140 (225)
84 4dcm_A Ribosomal RNA large sub 99.3 6.2E-12 2.1E-16 124.6 12.7 125 169-318 213-340 (375)
85 3c3p_A Methyltransferase; NP_9 99.3 3.8E-13 1.3E-17 121.6 3.5 116 169-315 47-163 (210)
86 2esr_A Methyltransferase; stru 99.3 4.3E-12 1.5E-16 111.1 9.9 111 176-316 29-142 (177)
87 1nkv_A Hypothetical protein YJ 99.3 1.3E-11 4.5E-16 114.2 13.3 114 171-315 29-143 (256)
88 3dxy_A TRNA (guanine-N(7)-)-me 99.3 2E-12 7E-17 118.4 7.5 118 177-313 33-151 (218)
89 3jwh_A HEN1; methyltransferase 99.3 4.2E-11 1.4E-15 108.4 16.0 118 170-314 21-143 (217)
90 2plw_A Ribosomal RNA methyltra 99.3 1.4E-11 4.7E-16 110.0 12.6 126 176-330 20-169 (201)
91 2yxd_A Probable cobalt-precorr 99.3 1.8E-11 6E-16 106.8 12.4 126 170-336 27-152 (183)
92 2f8l_A Hypothetical protein LM 99.3 1.5E-12 5.1E-17 127.2 6.1 144 175-330 127-276 (344)
93 1l3i_A Precorrin-6Y methyltran 99.3 6.2E-12 2.1E-16 110.4 9.3 128 169-333 24-152 (192)
94 3lec_A NADB-rossmann superfami 99.3 3E-11 1E-15 111.7 14.2 127 176-338 19-146 (230)
95 4gek_A TRNA (CMO5U34)-methyltr 99.3 2.3E-11 7.7E-16 114.6 13.6 113 176-316 68-182 (261)
96 3hem_A Cyclopropane-fatty-acyl 99.3 4.8E-11 1.6E-15 113.8 15.9 124 170-317 64-188 (302)
97 2b25_A Hypothetical protein; s 99.3 1.2E-11 4E-16 120.2 11.6 113 169-312 96-219 (336)
98 2ipx_A RRNA 2'-O-methyltransfe 99.3 2.1E-11 7.3E-16 111.9 12.6 109 174-312 73-182 (233)
99 1r18_A Protein-L-isoaspartate( 99.3 8.1E-12 2.8E-16 114.2 9.6 105 175-313 81-195 (227)
100 1o9g_A RRNA methyltransferase; 99.3 8.4E-12 2.9E-16 115.9 9.7 122 177-315 50-217 (250)
101 2h1r_A Dimethyladenosine trans 99.3 9.2E-13 3.2E-17 126.5 2.9 129 160-316 24-163 (299)
102 3gnl_A Uncharacterized protein 99.3 3.8E-11 1.3E-15 111.9 13.4 126 176-337 19-145 (244)
103 1g8a_A Fibrillarin-like PRE-rR 99.3 1.4E-11 4.7E-16 112.5 10.3 108 176-313 71-179 (227)
104 3cbg_A O-methyltransferase; cy 99.3 2.8E-12 9.5E-17 118.2 5.5 119 169-316 63-186 (232)
105 2bm8_A Cephalosporin hydroxyla 99.3 1.5E-12 5.1E-17 120.7 3.7 131 172-336 75-214 (236)
106 2fhp_A Methylase, putative; al 99.3 1.1E-11 3.7E-16 109.0 8.7 114 177-317 43-159 (187)
107 1fbn_A MJ fibrillarin homologu 99.3 2.5E-11 8.4E-16 111.5 11.5 106 174-311 70-177 (230)
108 2avd_A Catechol-O-methyltransf 99.3 1.2E-12 4E-17 119.6 2.1 115 171-314 62-181 (229)
109 2yxe_A Protein-L-isoaspartate 99.3 2.7E-11 9.3E-16 109.3 11.2 112 169-314 68-179 (215)
110 2yvl_A TRMI protein, hypotheti 99.3 4.3E-11 1.5E-15 110.2 12.7 108 172-315 85-193 (248)
111 2okc_A Type I restriction enzy 99.3 5.9E-12 2E-16 127.3 7.4 163 157-334 150-332 (445)
112 2jjq_A Uncharacterized RNA met 99.2 5.9E-11 2E-15 119.4 14.5 79 176-262 288-366 (425)
113 2nyu_A Putative ribosomal RNA 99.2 2.8E-11 9.6E-16 107.4 10.8 124 176-327 20-158 (196)
114 3ckk_A TRNA (guanine-N(7)-)-me 99.2 1.4E-11 4.7E-16 114.3 9.0 119 176-313 44-169 (235)
115 3jwg_A HEN1, methyltransferase 99.2 9.7E-11 3.3E-15 106.0 14.1 117 171-314 22-143 (219)
116 3dtn_A Putative methyltransfer 99.2 1E-10 3.6E-15 106.7 14.4 111 176-316 42-152 (234)
117 1ws6_A Methyltransferase; stru 99.2 7.5E-12 2.6E-16 108.3 6.3 110 178-319 41-154 (171)
118 3dmg_A Probable ribosomal RNA 99.2 4.1E-11 1.4E-15 118.9 12.5 115 177-318 232-346 (381)
119 1jg1_A PIMT;, protein-L-isoasp 99.2 2.6E-11 9E-16 111.5 10.0 122 157-314 70-191 (235)
120 3ofk_A Nodulation protein S; N 99.2 1.4E-10 4.6E-15 104.7 14.5 113 169-312 42-154 (216)
121 1m6y_A S-adenosyl-methyltransf 99.2 7.5E-12 2.6E-16 120.4 6.4 90 170-261 18-110 (301)
122 3orh_A Guanidinoacetate N-meth 99.2 8.4E-12 2.9E-16 115.5 6.4 113 176-312 58-170 (236)
123 2nxc_A L11 mtase, ribosomal pr 99.2 4.5E-11 1.6E-15 111.8 11.5 124 176-338 118-241 (254)
124 2xvm_A Tellurite resistance pr 99.2 8.7E-11 3E-15 104.0 12.4 114 169-312 23-136 (199)
125 3ujc_A Phosphoethanolamine N-m 99.2 9.7E-11 3.3E-15 108.5 13.2 138 171-338 48-203 (266)
126 1kpg_A CFA synthase;, cyclopro 99.2 2.4E-10 8.2E-15 107.8 15.6 114 171-315 57-171 (287)
127 1ej0_A FTSJ; methyltransferase 99.2 5.5E-11 1.9E-15 102.5 10.1 113 176-314 20-138 (180)
128 2hnk_A SAM-dependent O-methylt 99.2 1.4E-11 4.7E-16 113.7 6.3 118 169-315 51-184 (239)
129 3bus_A REBM, methyltransferase 99.2 4E-10 1.4E-14 105.3 16.3 115 171-315 54-169 (273)
130 3sm3_A SAM-dependent methyltra 99.2 2.8E-10 9.6E-15 103.3 14.9 112 176-315 28-144 (235)
131 1zq9_A Probable dimethyladenos 99.2 1.3E-11 4.5E-16 117.6 6.3 88 167-261 17-105 (285)
132 1jsx_A Glucose-inhibited divis 99.2 5.9E-11 2E-15 106.3 10.2 103 178-314 65-167 (207)
133 3cgg_A SAM-dependent methyltra 99.2 7E-10 2.4E-14 97.4 16.7 129 176-338 44-172 (195)
134 1vbf_A 231AA long hypothetical 99.2 7.1E-11 2.4E-15 107.8 10.4 120 157-315 49-168 (231)
135 3ocj_A Putative exported prote 99.2 9.1E-11 3.1E-15 112.2 11.3 114 175-314 115-229 (305)
136 2fk8_A Methoxy mycolic acid sy 99.2 3.4E-10 1.2E-14 108.5 15.4 116 171-317 83-199 (318)
137 3mgg_A Methyltransferase; NYSG 99.2 2.2E-10 7.4E-15 107.4 13.5 109 175-312 34-142 (276)
138 4fsd_A Arsenic methyltransfera 99.2 2.6E-10 8.8E-15 112.9 14.6 114 175-314 80-205 (383)
139 3dlc_A Putative S-adenosyl-L-m 99.2 2.5E-10 8.5E-15 102.3 13.2 113 172-315 38-151 (219)
140 3mq2_A 16S rRNA methyltransfer 99.2 4.8E-11 1.7E-15 108.0 8.5 144 171-339 20-182 (218)
141 1pjz_A Thiopurine S-methyltran 99.2 9.6E-11 3.3E-15 105.7 10.3 136 174-338 18-173 (203)
142 2pjd_A Ribosomal RNA small sub 99.2 4.9E-11 1.7E-15 116.4 8.7 124 168-318 186-309 (343)
143 1zx0_A Guanidinoacetate N-meth 99.2 3.3E-11 1.1E-15 110.8 7.0 115 176-314 58-172 (236)
144 2p41_A Type II methyltransfera 99.2 4.1E-11 1.4E-15 115.5 7.5 106 176-311 80-190 (305)
145 2o57_A Putative sarcosine dime 99.2 6.2E-10 2.1E-14 105.5 15.6 134 175-338 79-231 (297)
146 3ldu_A Putative methylase; str 99.2 1E-09 3.5E-14 109.0 17.8 108 149-259 160-311 (385)
147 1mjf_A Spermidine synthase; sp 99.1 6.8E-11 2.3E-15 112.4 8.8 114 176-316 73-197 (281)
148 2kw5_A SLR1183 protein; struct 99.1 4.4E-10 1.5E-14 100.2 13.6 107 176-315 28-134 (202)
149 2ex4_A Adrenal gland protein A 99.1 2.1E-10 7.2E-15 105.5 11.7 134 177-338 78-222 (241)
150 2ar0_A M.ecoki, type I restric 99.1 4.7E-11 1.6E-15 123.6 8.1 163 157-332 148-335 (541)
151 3hnr_A Probable methyltransfer 99.1 3.6E-10 1.2E-14 102.0 13.0 111 173-317 40-150 (220)
152 3p2e_A 16S rRNA methylase; met 99.1 6.7E-11 2.3E-15 108.8 8.0 114 176-312 22-139 (225)
153 3ou2_A SAM-dependent methyltra 99.1 8.6E-10 2.9E-14 99.0 15.2 107 175-315 43-149 (218)
154 3e23_A Uncharacterized protein 99.1 2.8E-10 9.7E-15 102.3 11.8 128 175-338 40-179 (211)
155 2ih2_A Modification methylase 99.1 5.1E-12 1.7E-16 126.0 0.1 155 158-331 19-185 (421)
156 1ve3_A Hypothetical protein PH 99.1 4.6E-10 1.6E-14 101.5 13.1 108 177-314 37-144 (227)
157 4htf_A S-adenosylmethionine-de 99.1 7.6E-10 2.6E-14 104.3 14.8 131 178-338 68-229 (285)
158 3m70_A Tellurite resistance pr 99.1 2.6E-10 8.9E-15 107.6 11.6 110 172-312 114-223 (286)
159 3q87_B N6 adenine specific DNA 99.1 8.6E-11 2.9E-15 103.0 7.1 133 169-338 12-146 (170)
160 1xtp_A LMAJ004091AAA; SGPP, st 99.1 5.4E-10 1.8E-14 103.0 12.8 135 174-338 89-235 (254)
161 3g2m_A PCZA361.24; SAM-depende 99.1 2.8E-10 9.7E-15 108.2 10.9 113 174-316 79-194 (299)
162 3gu3_A Methyltransferase; alph 99.1 4E-10 1.4E-14 106.6 11.6 113 172-314 16-128 (284)
163 3g5t_A Trans-aconitate 3-methy 99.1 7.2E-10 2.5E-14 105.4 13.3 112 176-314 34-151 (299)
164 3uwp_A Histone-lysine N-methyl 99.1 3.3E-10 1.1E-14 112.7 10.8 115 171-313 166-289 (438)
165 2xyq_A Putative 2'-O-methyl tr 99.1 1.6E-10 5.6E-15 110.4 8.1 126 174-335 59-191 (290)
166 3g07_A 7SK snRNA methylphospha 99.1 3.3E-10 1.1E-14 107.9 10.2 115 178-313 46-221 (292)
167 3ldg_A Putative uncharacterize 99.1 1.7E-09 5.7E-14 107.4 15.7 107 150-259 160-310 (384)
168 2p35_A Trans-aconitate 2-methy 99.1 6.8E-10 2.3E-14 102.6 12.0 109 171-314 26-134 (259)
169 3h2b_A SAM-dependent methyltra 99.1 8.3E-10 2.8E-14 98.5 11.9 127 179-339 42-180 (203)
170 3lcc_A Putative methyl chlorid 99.1 7.7E-10 2.6E-14 101.2 11.6 130 179-338 67-204 (235)
171 1ri5_A MRNA capping enzyme; me 99.1 1.1E-09 3.7E-14 103.2 12.7 113 176-314 62-176 (298)
172 2pxx_A Uncharacterized protein 99.1 6.1E-10 2.1E-14 99.6 10.4 122 177-315 41-162 (215)
173 3bkx_A SAM-dependent methyltra 99.1 1.7E-09 5.8E-14 101.0 13.9 121 170-316 35-163 (275)
174 3k0b_A Predicted N6-adenine-sp 99.0 1.1E-09 3.7E-14 109.1 12.9 107 150-259 167-317 (393)
175 3pfg_A N-methyltransferase; N, 99.0 1.8E-09 6.3E-14 100.4 13.6 103 177-312 49-151 (263)
176 2p8j_A S-adenosylmethionine-de 99.0 1.1E-09 3.6E-14 98.0 11.5 112 176-316 21-132 (209)
177 3ccf_A Cyclopropane-fatty-acyl 99.0 1.9E-09 6.3E-14 101.4 13.3 111 168-315 47-157 (279)
178 3d2l_A SAM-dependent methyltra 99.0 1E-09 3.5E-14 100.3 11.0 108 177-314 32-139 (243)
179 2a14_A Indolethylamine N-methy 99.0 8.7E-10 3E-14 103.3 10.7 140 175-338 52-235 (263)
180 3g5l_A Putative S-adenosylmeth 99.0 2.4E-09 8.1E-14 98.9 13.4 109 172-313 38-146 (253)
181 3m33_A Uncharacterized protein 99.0 3E-10 1E-14 103.7 7.1 116 176-337 46-163 (226)
182 3lkd_A Type I restriction-modi 99.0 3.2E-10 1.1E-14 117.3 7.9 168 157-334 196-383 (542)
183 3iv6_A Putative Zn-dependent a 99.0 1.3E-09 4.5E-14 102.6 11.4 128 170-328 37-164 (261)
184 2fyt_A Protein arginine N-meth 99.0 7.2E-10 2.5E-14 108.1 9.9 113 174-315 60-174 (340)
185 2vdw_A Vaccinia virus capping 99.0 8.2E-10 2.8E-14 106.1 10.1 113 177-314 47-171 (302)
186 1wzn_A SAM-dependent methyltra 99.0 2.3E-09 7.9E-14 98.8 12.6 108 176-313 39-146 (252)
187 3i9f_A Putative type 11 methyl 99.0 2.1E-09 7.3E-14 93.0 11.6 127 171-338 10-145 (170)
188 3bzb_A Uncharacterized protein 99.0 1.7E-09 5.9E-14 102.5 12.0 133 176-338 77-234 (281)
189 3adn_A Spermidine synthase; am 99.0 3.6E-10 1.2E-14 108.3 7.1 131 177-331 82-219 (294)
190 3l8d_A Methyltransferase; stru 99.0 3.3E-09 1.1E-13 97.0 13.3 129 176-338 51-197 (242)
191 1ne2_A Hypothetical protein TA 99.0 1.3E-09 4.5E-14 97.3 10.1 115 175-332 48-162 (200)
192 1u2z_A Histone-lysine N-methyl 99.0 1.7E-09 5.8E-14 108.8 12.0 112 172-311 236-358 (433)
193 3v97_A Ribosomal RNA large sub 99.0 1.2E-08 4E-13 108.8 18.8 111 149-259 155-313 (703)
194 3bwc_A Spermidine synthase; SA 99.0 8.9E-10 3E-14 105.8 8.8 136 177-335 94-234 (304)
195 3q7e_A Protein arginine N-meth 99.0 1.5E-09 5.1E-14 106.2 10.3 114 176-317 64-178 (349)
196 3ll7_A Putative methyltransfer 99.0 4.5E-10 1.6E-14 112.1 6.6 82 178-262 93-176 (410)
197 2yqz_A Hypothetical protein TT 99.0 2.6E-09 8.8E-14 98.8 11.2 105 175-311 36-140 (263)
198 2y1w_A Histone-arginine methyl 99.0 1.1E-09 3.7E-14 107.1 9.0 114 173-316 45-159 (348)
199 1qzz_A RDMB, aclacinomycin-10- 99.0 1.4E-08 4.7E-13 99.5 16.5 112 172-313 176-288 (374)
200 3dli_A Methyltransferase; PSI- 99.0 3.9E-09 1.3E-13 96.9 11.8 128 176-338 39-181 (240)
201 2i62_A Nicotinamide N-methyltr 99.0 2.3E-09 7.7E-14 99.3 10.3 139 176-338 54-236 (265)
202 1xj5_A Spermidine synthase 1; 99.0 3.6E-10 1.2E-14 110.2 5.0 119 176-317 118-240 (334)
203 2gb4_A Thiopurine S-methyltran 99.0 6E-09 2.1E-13 97.4 13.2 134 176-338 66-224 (252)
204 1y8c_A S-adenosylmethionine-de 99.0 2.6E-09 8.9E-14 97.5 10.4 107 178-313 37-143 (246)
205 2r3s_A Uncharacterized protein 98.9 1.3E-08 4.3E-13 98.0 15.6 111 177-316 164-275 (335)
206 3bgv_A MRNA CAP guanine-N7 met 98.9 6.4E-09 2.2E-13 99.5 13.4 113 177-314 33-157 (313)
207 2p7i_A Hypothetical protein; p 98.9 9.4E-10 3.2E-14 100.4 6.8 126 177-338 41-196 (250)
208 3fzg_A 16S rRNA methylase; met 98.9 6.6E-10 2.3E-14 99.6 5.0 108 177-316 48-157 (200)
209 3r0q_C Probable protein argini 98.9 2E-09 6.9E-14 106.4 8.9 114 174-316 59-173 (376)
210 3bxo_A N,N-dimethyltransferase 98.9 1.9E-08 6.4E-13 91.6 14.8 106 177-315 39-144 (239)
211 1g6q_1 HnRNP arginine N-methyl 98.9 3.8E-09 1.3E-13 102.4 10.6 113 175-315 35-148 (328)
212 2oxt_A Nucleoside-2'-O-methylt 98.9 9.8E-10 3.3E-14 103.7 6.2 108 176-313 72-186 (265)
213 3bkw_A MLL3908 protein, S-aden 98.9 3.6E-09 1.2E-13 96.6 9.9 110 170-312 35-144 (243)
214 2r6z_A UPF0341 protein in RSP 98.9 3.5E-10 1.2E-14 106.4 3.1 90 167-259 72-171 (258)
215 2o07_A Spermidine synthase; st 98.9 1.8E-09 6.2E-14 103.8 8.0 116 177-316 94-213 (304)
216 2qfm_A Spermine synthase; sper 98.9 1.4E-09 4.9E-14 106.5 7.3 135 178-330 188-332 (364)
217 2wa2_A Non-structural protein 98.9 8.7E-10 3E-14 104.7 5.6 109 176-314 80-195 (276)
218 2pt6_A Spermidine synthase; tr 98.9 1.9E-09 6.5E-14 104.5 7.8 130 177-330 115-250 (321)
219 3i53_A O-methyltransferase; CO 98.9 5.6E-08 1.9E-12 93.8 18.2 112 175-316 166-278 (332)
220 1iy9_A Spermidine synthase; ro 98.9 3.2E-09 1.1E-13 100.6 9.1 114 178-315 75-192 (275)
221 3dp7_A SAM-dependent methyltra 98.9 4.9E-08 1.7E-12 95.7 17.8 113 177-316 178-291 (363)
222 3e8s_A Putative SAM dependent 98.9 5.2E-09 1.8E-13 94.1 10.0 104 174-313 48-153 (227)
223 3b3j_A Histone-arginine methyl 98.9 3.6E-09 1.2E-13 107.9 9.9 112 174-315 154-266 (480)
224 1x19_A CRTF-related protein; m 98.9 3.2E-08 1.1E-12 96.7 16.0 114 172-315 184-298 (359)
225 3ggd_A SAM-dependent methyltra 98.9 6.7E-09 2.3E-13 95.4 10.5 110 176-315 54-166 (245)
226 2i7c_A Spermidine synthase; tr 98.9 3.4E-09 1.2E-13 100.7 8.7 117 176-316 76-196 (283)
227 1tw3_A COMT, carminomycin 4-O- 98.9 3.1E-08 1.1E-12 96.5 15.8 112 173-314 178-290 (360)
228 2b2c_A Spermidine synthase; be 98.9 1.9E-09 6.5E-14 104.2 7.0 116 177-316 107-226 (314)
229 3htx_A HEN1; HEN1, small RNA m 98.9 1.7E-08 5.8E-13 107.6 14.1 116 172-314 715-836 (950)
230 3thr_A Glycine N-methyltransfe 98.9 6.7E-09 2.3E-13 98.0 9.9 123 171-314 50-177 (293)
231 3gwz_A MMCR; methyltransferase 98.9 9.5E-08 3.2E-12 93.9 18.5 114 174-317 198-312 (369)
232 2g72_A Phenylethanolamine N-me 98.9 1.4E-08 4.9E-13 95.9 11.9 137 178-338 71-253 (289)
233 3gjy_A Spermidine synthase; AP 98.8 6.4E-09 2.2E-13 100.4 9.4 133 181-336 92-226 (317)
234 1uir_A Polyamine aminopropyltr 98.8 4.4E-09 1.5E-13 101.5 8.3 118 177-315 76-198 (314)
235 3mcz_A O-methyltransferase; ad 98.8 5.2E-08 1.8E-12 94.6 15.5 116 174-316 174-291 (352)
236 3ege_A Putative methyltransfer 98.8 8.2E-09 2.8E-13 96.2 9.3 106 171-314 27-132 (261)
237 4hg2_A Methyltransferase type 98.8 5.5E-09 1.9E-13 98.1 7.5 102 178-317 39-140 (257)
238 3khk_A Type I restriction-modi 98.8 8.8E-10 3E-14 114.1 2.2 166 157-333 224-420 (544)
239 3gru_A Dimethyladenosine trans 98.8 8.2E-09 2.8E-13 98.9 8.7 84 169-259 41-124 (295)
240 2avn_A Ubiquinone/menaquinone 98.8 9.8E-09 3.3E-13 95.5 9.0 102 178-315 54-155 (260)
241 2aot_A HMT, histamine N-methyl 98.8 1.5E-08 5.3E-13 96.0 10.5 113 176-314 50-174 (292)
242 2oyr_A UPF0341 protein YHIQ; a 98.8 4.9E-09 1.7E-13 98.5 6.7 89 167-259 75-174 (258)
243 3cc8_A Putative methyltransfer 98.8 3.4E-08 1.2E-12 88.9 12.0 102 177-314 31-132 (230)
244 2gs9_A Hypothetical protein TT 98.8 1.8E-08 6.2E-13 90.2 9.5 100 178-315 36-135 (211)
245 3ufb_A Type I restriction-modi 98.8 1.9E-08 6.6E-13 103.7 10.9 169 157-334 196-387 (530)
246 2ip2_A Probable phenazine-spec 98.8 6.9E-08 2.4E-12 93.1 14.2 110 175-315 165-275 (334)
247 1yub_A Ermam, rRNA methyltrans 98.8 1.5E-10 5.2E-15 107.5 -4.5 96 160-262 11-106 (245)
248 1p91_A Ribosomal RNA large sub 98.8 1E-08 3.5E-13 95.6 7.7 98 177-315 84-181 (269)
249 4hc4_A Protein arginine N-meth 98.8 1.3E-08 4.5E-13 100.6 8.3 116 177-321 82-200 (376)
250 2cmg_A Spermidine synthase; tr 98.7 1.1E-08 3.9E-13 96.2 5.6 100 178-316 72-175 (262)
251 1vlm_A SAM-dependent methyltra 98.7 2.2E-07 7.5E-12 84.0 13.9 119 178-338 47-185 (219)
252 3cvo_A Methyltransferase-like 98.7 1.4E-07 4.7E-12 85.4 11.9 116 177-329 29-169 (202)
253 2qe6_A Uncharacterized protein 98.7 2.2E-07 7.7E-12 87.7 13.1 111 178-315 77-199 (274)
254 3s1s_A Restriction endonucleas 98.6 9.3E-08 3.2E-12 101.8 11.3 148 177-333 320-490 (878)
255 3tqs_A Ribosomal RNA small sub 98.6 3.5E-08 1.2E-12 92.5 6.7 85 169-259 20-106 (255)
256 1wg8_A Predicted S-adenosylmet 98.6 2.6E-08 8.9E-13 94.2 4.8 85 170-261 14-101 (285)
257 3giw_A Protein of unknown func 98.6 1.1E-07 3.8E-12 89.9 9.1 114 179-315 79-203 (277)
258 3sso_A Methyltransferase; macr 98.6 6.3E-08 2.2E-12 96.1 6.9 101 178-314 216-326 (419)
259 2zfu_A Nucleomethylin, cerebra 98.6 1.1E-07 3.7E-12 85.4 7.6 112 176-338 65-176 (215)
260 3lst_A CALO1 methyltransferase 98.5 4.4E-07 1.5E-11 88.2 12.3 111 172-315 178-289 (348)
261 1af7_A Chemotaxis receptor met 98.5 2.5E-07 8.4E-12 87.6 9.9 108 179-311 106-251 (274)
262 2qy6_A UPF0209 protein YFCK; s 98.5 1.8E-07 6.3E-12 87.7 8.6 131 176-338 58-232 (257)
263 2px2_A Genome polyprotein [con 98.5 4.5E-08 1.5E-12 90.9 4.1 77 176-264 71-153 (269)
264 3hp7_A Hemolysin, putative; st 98.5 1.7E-07 5.9E-12 89.4 8.1 99 178-311 85-184 (291)
265 1qam_A ERMC' methyltransferase 98.5 1.2E-07 4E-12 88.1 6.6 85 168-259 20-104 (244)
266 3tka_A Ribosomal RNA small sub 98.5 8.2E-08 2.8E-12 92.8 5.7 89 170-262 49-141 (347)
267 3uzu_A Ribosomal RNA small sub 98.5 1.9E-07 6.5E-12 88.6 7.7 87 169-259 33-124 (279)
268 3opn_A Putative hemolysin; str 98.5 1.1E-07 3.8E-12 87.7 5.9 100 178-312 37-137 (232)
269 4a6d_A Hydroxyindole O-methylt 98.5 1.5E-06 5E-11 84.9 13.7 114 174-317 175-288 (353)
270 4e2x_A TCAB9; kijanose, tetron 98.4 1.9E-07 6.6E-12 92.8 6.7 131 173-338 102-250 (416)
271 3fut_A Dimethyladenosine trans 98.4 1.7E-07 5.7E-12 88.6 5.8 84 169-260 38-121 (271)
272 3ftd_A Dimethyladenosine trans 98.4 1.8E-07 6.3E-12 87.2 5.5 84 169-259 22-105 (249)
273 3evf_A RNA-directed RNA polyme 98.4 3.7E-07 1.3E-11 85.8 7.1 137 176-337 72-210 (277)
274 3lcv_B Sisomicin-gentamicin re 98.4 4.8E-07 1.6E-11 84.7 7.6 108 179-316 133-241 (281)
275 3frh_A 16S rRNA methylase; met 98.4 2.3E-06 7.9E-11 79.3 12.0 106 178-316 105-211 (253)
276 3eld_A Methyltransferase; flav 98.4 5.5E-07 1.9E-11 85.3 7.1 135 177-337 80-217 (300)
277 3gcz_A Polyprotein; flavivirus 98.3 1.6E-07 5.5E-12 88.4 3.2 134 176-337 88-227 (282)
278 4azs_A Methyltransferase WBDD; 98.3 8.4E-07 2.9E-11 92.2 7.9 75 178-255 66-140 (569)
279 1fp2_A Isoflavone O-methyltran 98.3 4.8E-06 1.6E-10 80.9 12.7 104 176-316 186-292 (352)
280 3reo_A (ISO)eugenol O-methyltr 98.2 4.6E-06 1.6E-10 81.8 11.2 104 176-316 201-304 (368)
281 1qyr_A KSGA, high level kasuga 98.2 4E-07 1.4E-11 85.1 3.3 86 170-260 13-101 (252)
282 3r24_A NSP16, 2'-O-methyl tran 98.2 1.5E-06 5.2E-11 81.9 7.0 120 175-329 106-231 (344)
283 2wk1_A NOVP; transferase, O-me 98.2 2.5E-06 8.5E-11 81.0 8.4 125 179-332 107-263 (282)
284 3p9c_A Caffeic acid O-methyltr 98.2 6.3E-06 2.2E-10 80.8 11.2 104 176-316 199-302 (364)
285 1zg3_A Isoflavanone 4'-O-methy 98.2 9.9E-06 3.4E-10 78.9 12.1 103 177-316 192-297 (358)
286 4auk_A Ribosomal RNA large sub 98.1 1.6E-06 5.5E-11 85.0 5.4 72 176-259 209-280 (375)
287 1fp1_D Isoliquiritigenin 2'-O- 98.1 6.5E-06 2.2E-10 80.7 9.4 103 176-315 207-309 (372)
288 3p8z_A Mtase, non-structural p 98.1 3.1E-06 1.1E-10 77.6 5.6 77 176-258 76-153 (267)
289 2oo3_A Protein involved in cat 98.0 1.8E-06 6.3E-11 81.5 1.9 117 137-259 45-169 (283)
290 2ld4_A Anamorsin; methyltransf 97.9 6.9E-06 2.4E-10 71.3 4.6 114 174-333 8-128 (176)
291 3g7u_A Cytosine-specific methy 97.8 0.00027 9.1E-09 69.7 14.2 81 180-267 3-89 (376)
292 3o4f_A Spermidine synthase; am 97.8 0.00029 9.8E-09 67.1 13.7 117 171-312 77-198 (294)
293 1g55_A DNA cytosine methyltran 97.8 5E-05 1.7E-09 73.9 8.6 83 180-267 3-86 (343)
294 2c7p_A Modification methylase 97.6 0.00016 5.4E-09 69.9 8.9 80 179-268 11-90 (327)
295 3lkz_A Non-structural protein 97.6 0.00037 1.3E-08 65.8 11.0 81 176-263 92-173 (321)
296 4gqb_A Protein arginine N-meth 97.6 0.00013 4.6E-09 76.3 8.4 120 179-326 358-483 (637)
297 3ua3_A Protein arginine N-meth 97.5 7.7E-05 2.6E-09 78.5 5.6 124 179-327 410-551 (745)
298 3c6k_A Spermine synthase; sper 97.5 0.00017 5.9E-09 70.8 7.5 121 178-316 205-336 (381)
299 2k4m_A TR8_protein, UPF0146 pr 97.0 0.00096 3.3E-08 56.8 6.3 64 177-258 34-99 (153)
300 2zig_A TTHA0409, putative modi 97.0 0.0012 4.2E-08 62.5 7.8 60 177-239 234-293 (297)
301 3qv2_A 5-cytosine DNA methyltr 96.9 0.001 3.5E-08 64.3 5.9 78 179-262 10-89 (327)
302 2py6_A Methyltransferase FKBM; 96.9 0.0029 9.9E-08 62.9 9.2 64 173-236 221-289 (409)
303 3vyw_A MNMC2; tRNA wobble urid 96.9 0.0032 1.1E-07 60.1 9.0 131 178-338 96-245 (308)
304 4h0n_A DNMT2; SAH binding, tra 96.8 0.0011 3.6E-08 64.3 5.4 82 180-266 4-86 (333)
305 2qrv_A DNA (cytosine-5)-methyl 96.8 0.0011 3.8E-08 63.1 5.4 84 177-266 14-100 (295)
306 1i4w_A Mitochondrial replicati 96.7 0.0032 1.1E-07 61.4 7.4 83 156-242 29-118 (353)
307 3ubt_Y Modification methylase 96.6 0.0075 2.6E-07 57.5 9.3 79 180-267 1-79 (331)
308 1g60_A Adenine-specific methyl 96.3 0.0044 1.5E-07 57.5 6.0 50 176-228 210-259 (260)
309 3b5i_A S-adenosyl-L-methionine 96.2 0.024 8.3E-07 55.6 10.5 129 179-315 53-228 (374)
310 3me5_A Cytosine-specific methy 96.0 0.0066 2.3E-07 61.6 5.8 85 178-266 87-186 (482)
311 3pvc_A TRNA 5-methylaminomethy 96.0 0.0032 1.1E-07 66.5 3.4 130 178-337 58-229 (689)
312 1pl8_A Human sorbitol dehydrog 96.0 0.013 4.5E-07 56.5 7.5 99 174-312 167-273 (356)
313 4ej6_A Putative zinc-binding d 95.8 0.023 7.8E-07 55.3 8.3 99 174-311 178-283 (370)
314 3s2e_A Zinc-containing alcohol 95.6 0.036 1.2E-06 52.9 8.7 97 175-311 163-262 (340)
315 3two_A Mannitol dehydrogenase; 95.5 0.021 7.3E-07 54.8 7.1 91 175-311 173-264 (348)
316 2dph_A Formaldehyde dismutase; 95.5 0.0082 2.8E-07 59.0 4.1 73 175-255 182-260 (398)
317 1kol_A Formaldehyde dehydrogen 95.5 0.011 3.7E-07 58.0 5.0 50 175-229 182-232 (398)
318 3fpc_A NADP-dependent alcohol 95.5 0.03 1E-06 53.8 8.1 99 174-311 162-265 (352)
319 2efj_A 3,7-dimethylxanthine me 95.5 0.087 3E-06 51.8 11.2 131 179-316 53-229 (384)
320 1f8f_A Benzyl alcohol dehydrog 95.4 0.037 1.3E-06 53.6 8.1 98 174-311 186-288 (371)
321 1p0f_A NADP-dependent alcohol 95.3 0.038 1.3E-06 53.6 8.0 99 174-311 187-292 (373)
322 3uko_A Alcohol dehydrogenase c 95.3 0.03 1E-06 54.4 7.1 100 174-312 189-295 (378)
323 3jv7_A ADH-A; dehydrogenase, n 95.3 0.022 7.6E-07 54.5 6.1 97 175-311 168-269 (345)
324 1e3j_A NADP(H)-dependent ketos 95.2 0.085 2.9E-06 50.6 10.1 98 174-311 164-270 (352)
325 1cdo_A Alcohol dehydrogenase; 95.1 0.035 1.2E-06 53.9 6.9 99 174-312 188-294 (374)
326 2fzw_A Alcohol dehydrogenase c 95.1 0.049 1.7E-06 52.7 7.9 99 174-311 186-291 (373)
327 4fs3_A Enoyl-[acyl-carrier-pro 95.0 0.11 3.9E-06 47.5 10.0 83 178-260 5-97 (256)
328 1e3i_A Alcohol dehydrogenase, 95.0 0.042 1.4E-06 53.3 7.4 99 174-312 191-297 (376)
329 4dvj_A Putative zinc-dependent 95.0 0.05 1.7E-06 52.7 7.8 94 178-311 171-269 (363)
330 2jhf_A Alcohol dehydrogenase E 95.0 0.054 1.8E-06 52.5 8.0 99 174-311 187-292 (374)
331 3uog_A Alcohol dehydrogenase; 94.9 0.067 2.3E-06 51.7 8.4 98 174-312 185-287 (363)
332 2zig_A TTHA0409, putative modi 94.9 0.019 6.5E-07 54.2 4.3 103 229-337 20-132 (297)
333 1uuf_A YAHK, zinc-type alcohol 94.9 0.034 1.1E-06 54.1 6.2 72 175-255 191-263 (369)
334 1m6e_X S-adenosyl-L-methionnin 94.9 0.02 6.9E-07 55.8 4.5 129 179-315 52-212 (359)
335 4a2c_A Galactitol-1-phosphate 94.8 0.14 4.6E-06 48.8 10.2 98 175-311 157-259 (346)
336 3m6i_A L-arabinitol 4-dehydrog 94.7 0.12 4E-06 49.8 9.5 101 174-312 175-283 (363)
337 1vj0_A Alcohol dehydrogenase, 94.6 0.061 2.1E-06 52.3 7.2 98 175-311 191-297 (380)
338 4eez_A Alcohol dehydrogenase 1 94.6 0.13 4.5E-06 48.9 9.4 98 175-311 160-262 (348)
339 1boo_A Protein (N-4 cytosine-s 94.4 0.073 2.5E-06 50.9 7.2 96 230-337 14-116 (323)
340 4dkj_A Cytosine-specific methy 94.4 0.046 1.6E-06 54.1 5.8 45 180-224 11-59 (403)
341 3tos_A CALS11; methyltransfera 94.2 0.091 3.1E-06 48.8 7.2 131 178-338 70-244 (257)
342 3swr_A DNA (cytosine-5)-methyl 93.9 0.13 4.3E-06 56.6 8.5 82 179-267 540-636 (1002)
343 3fbg_A Putative arginate lyase 93.8 0.081 2.8E-06 50.7 6.1 91 178-310 150-246 (346)
344 3ps9_A TRNA 5-methylaminomethy 93.7 0.24 8.2E-06 51.9 10.1 130 178-337 66-237 (676)
345 1piw_A Hypothetical zinc-type 93.7 0.056 1.9E-06 52.1 4.9 72 175-255 176-249 (360)
346 3ip1_A Alcohol dehydrogenase, 93.7 0.55 1.9E-05 45.9 12.1 74 175-255 210-288 (404)
347 4ft4_B DNA (cytosine-5)-methyl 93.7 0.094 3.2E-06 56.1 7.0 46 178-223 211-260 (784)
348 3grk_A Enoyl-(acyl-carrier-pro 93.4 1.1 3.9E-05 41.5 13.3 127 178-313 30-170 (293)
349 1boo_A Protein (N-4 cytosine-s 93.4 0.063 2.2E-06 51.3 4.5 51 176-229 250-300 (323)
350 2h6e_A ADH-4, D-arabinose 1-de 93.4 0.072 2.5E-06 50.9 4.9 99 175-312 168-269 (344)
351 1wma_A Carbonyl reductase [NAD 93.3 0.67 2.3E-05 41.7 11.3 122 178-313 3-139 (276)
352 1y1p_A ARII, aldehyde reductas 93.3 2.2 7.6E-05 39.5 15.3 82 178-260 10-94 (342)
353 1fmc_A 7 alpha-hydroxysteroid 93.2 1 3.5E-05 40.2 12.3 80 178-259 10-98 (255)
354 3k31_A Enoyl-(acyl-carrier-pro 93.1 0.53 1.8E-05 43.8 10.6 140 162-313 16-169 (296)
355 3gms_A Putative NADPH:quinone 93.1 0.22 7.6E-06 47.4 8.0 74 174-255 140-219 (340)
356 3goh_A Alcohol dehydrogenase, 93.1 0.06 2E-06 50.8 3.8 66 174-254 138-204 (315)
357 3o38_A Short chain dehydrogena 93.0 1.1 3.6E-05 40.7 12.2 127 178-313 21-161 (266)
358 3rih_A Short chain dehydrogena 92.7 0.48 1.7E-05 44.2 9.6 81 178-259 40-129 (293)
359 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.5 0.79 2.7E-05 41.5 10.5 123 178-313 20-156 (274)
360 1pqw_A Polyketide synthase; ro 92.5 0.21 7.1E-06 43.4 6.3 99 174-312 34-137 (198)
361 2d8a_A PH0655, probable L-thre 92.3 0.27 9.1E-06 47.0 7.3 98 174-312 164-267 (348)
362 2eih_A Alcohol dehydrogenase; 92.3 0.26 8.9E-06 47.0 7.2 73 175-255 163-241 (343)
363 2b5w_A Glucose dehydrogenase; 92.3 0.13 4.5E-06 49.4 5.1 95 175-311 163-272 (357)
364 2j3h_A NADP-dependent oxidored 92.2 0.17 5.7E-06 48.2 5.8 99 174-311 151-254 (345)
365 1rjw_A ADH-HT, alcohol dehydro 92.2 0.22 7.6E-06 47.4 6.7 97 175-311 161-260 (339)
366 3lf2_A Short chain oxidoreduct 92.2 3 0.0001 37.8 14.1 125 178-312 7-145 (265)
367 1v3u_A Leukotriene B4 12- hydr 92.0 0.22 7.6E-06 47.2 6.3 99 174-311 141-243 (333)
368 1eg2_A Modification methylase 92.0 0.16 5.5E-06 48.5 5.3 49 176-227 240-291 (319)
369 4dup_A Quinone oxidoreductase; 92.0 0.33 1.1E-05 46.5 7.5 99 174-312 163-265 (353)
370 3oig_A Enoyl-[acyl-carrier-pro 91.9 1.7 5.9E-05 39.3 12.0 129 178-313 6-148 (266)
371 3av4_A DNA (cytosine-5)-methyl 91.9 0.56 1.9E-05 53.0 10.1 82 179-267 851-947 (1330)
372 4b7c_A Probable oxidoreductase 91.4 0.16 5.5E-06 48.2 4.6 98 174-311 145-247 (336)
373 3r1i_A Short-chain type dehydr 91.3 1.5 5.2E-05 40.3 11.1 102 149-259 9-119 (276)
374 1g60_A Adenine-specific methyl 91.3 0.13 4.6E-06 47.3 3.8 90 232-337 6-95 (260)
375 1xu9_A Corticosteroid 11-beta- 91.2 2.1 7.3E-05 39.2 12.1 79 178-257 27-114 (286)
376 3qiv_A Short-chain dehydrogena 91.1 2 6.9E-05 38.4 11.6 79 178-258 8-95 (253)
377 4eye_A Probable oxidoreductase 91.0 0.16 5.6E-06 48.5 4.2 96 174-311 155-256 (342)
378 3o26_A Salutaridine reductase; 90.9 1.9 6.6E-05 39.5 11.5 82 178-260 11-102 (311)
379 3pxx_A Carveol dehydrogenase; 90.9 2.2 7.6E-05 38.9 11.8 121 178-313 9-154 (287)
380 3jyn_A Quinone oxidoreductase; 90.8 0.51 1.8E-05 44.5 7.5 98 174-312 136-239 (325)
381 3pk0_A Short-chain dehydrogena 90.8 1.9 6.5E-05 39.1 11.2 80 178-258 9-97 (262)
382 3lyl_A 3-oxoacyl-(acyl-carrier 90.7 4.6 0.00016 35.8 13.6 79 179-259 5-92 (247)
383 2jah_A Clavulanic acid dehydro 90.6 2.7 9.1E-05 37.7 11.9 78 179-258 7-93 (247)
384 3gaf_A 7-alpha-hydroxysteroid 90.6 2.3 7.8E-05 38.4 11.4 124 178-313 11-147 (256)
385 2c0c_A Zinc binding alcohol de 90.5 0.3 1E-05 47.1 5.6 97 175-312 160-261 (362)
386 3krt_A Crotonyl COA reductase; 90.5 0.37 1.3E-05 48.0 6.4 52 174-231 224-277 (456)
387 1mxh_A Pteridine reductase 2; 90.5 5.2 0.00018 36.2 13.9 79 179-259 11-104 (276)
388 3tjr_A Short chain dehydrogena 90.4 2.7 9.1E-05 39.1 12.0 81 178-260 30-119 (301)
389 3svt_A Short-chain type dehydr 90.4 4.3 0.00015 37.0 13.2 80 178-258 10-100 (281)
390 3ucx_A Short chain dehydrogena 90.3 3.1 0.0001 37.7 12.2 78 178-257 10-96 (264)
391 3nx4_A Putative oxidoreductase 90.3 0.58 2E-05 44.0 7.3 95 176-311 143-240 (324)
392 4a0s_A Octenoyl-COA reductase/ 90.1 0.57 2E-05 46.3 7.5 53 174-231 216-269 (447)
393 1jvb_A NAD(H)-dependent alcoho 90.1 0.6 2.1E-05 44.4 7.3 98 175-311 167-270 (347)
394 4eso_A Putative oxidoreductase 90.0 2.2 7.4E-05 38.6 10.8 120 178-313 7-139 (255)
395 3tqh_A Quinone oxidoreductase; 90.0 1.1 3.7E-05 42.1 8.9 94 174-311 148-244 (321)
396 1xa0_A Putative NADPH dependen 89.9 0.4 1.4E-05 45.3 5.8 97 175-311 145-245 (328)
397 1xhl_A Short-chain dehydrogena 89.9 2.8 9.6E-05 38.9 11.7 127 178-313 25-166 (297)
398 4g81_D Putative hexonate dehyd 89.8 3.3 0.00011 37.9 11.9 79 178-258 8-95 (255)
399 3pgx_A Carveol dehydrogenase; 89.7 3 0.0001 38.1 11.6 126 178-313 14-165 (280)
400 1yb1_A 17-beta-hydroxysteroid 89.6 7.1 0.00024 35.3 14.1 80 178-259 30-118 (272)
401 2c07_A 3-oxoacyl-(acyl-carrier 89.5 2.9 0.0001 38.2 11.4 80 178-259 43-131 (285)
402 2cdc_A Glucose dehydrogenase g 89.5 0.27 9.2E-06 47.3 4.4 91 179-312 181-278 (366)
403 3ek2_A Enoyl-(acyl-carrier-pro 89.5 0.9 3.1E-05 41.1 7.7 128 177-313 12-154 (271)
404 4egf_A L-xylulose reductase; s 89.4 3 0.0001 37.9 11.3 80 178-259 19-108 (266)
405 3i1j_A Oxidoreductase, short c 89.4 3.4 0.00012 36.7 11.5 128 178-314 13-155 (247)
406 2hcy_A Alcohol dehydrogenase 1 89.4 0.25 8.4E-06 47.2 3.9 98 175-312 166-269 (347)
407 3f1l_A Uncharacterized oxidore 89.4 6.3 0.00021 35.3 13.3 80 178-258 11-101 (252)
408 3h7a_A Short chain dehydrogena 89.3 2.1 7.2E-05 38.6 10.1 81 178-260 6-94 (252)
409 3rkr_A Short chain oxidoreduct 89.3 4 0.00014 36.8 12.1 79 178-258 28-115 (262)
410 3v2g_A 3-oxoacyl-[acyl-carrier 89.3 5.4 0.00019 36.3 13.0 124 178-314 30-167 (271)
411 2cf5_A Atccad5, CAD, cinnamyl 89.2 0.28 9.6E-06 47.1 4.2 70 175-255 176-250 (357)
412 3ioy_A Short-chain dehydrogena 89.2 4.2 0.00014 38.1 12.4 80 178-258 7-96 (319)
413 3qwb_A Probable quinone oxidor 89.1 1.1 3.7E-05 42.3 8.3 95 175-311 145-246 (334)
414 3is3_A 17BETA-hydroxysteroid d 89.1 4.6 0.00016 36.6 12.3 125 178-315 17-155 (270)
415 3rku_A Oxidoreductase YMR226C; 89.1 6 0.0002 36.4 13.2 80 178-258 32-124 (287)
416 3l6e_A Oxidoreductase, short-c 88.8 4.6 0.00016 35.9 11.9 120 179-313 3-135 (235)
417 3l77_A Short-chain alcohol deh 88.8 3.6 0.00012 36.2 11.2 79 179-259 2-90 (235)
418 1xkq_A Short-chain reductase f 88.7 2.7 9.4E-05 38.4 10.5 81 178-259 5-96 (280)
419 2bd0_A Sepiapterin reductase; 88.7 2.7 9.3E-05 37.2 10.2 78 179-258 2-95 (244)
420 2dq4_A L-threonine 3-dehydroge 88.6 0.38 1.3E-05 45.8 4.7 99 173-312 160-262 (343)
421 1yb5_A Quinone oxidoreductase; 88.6 1.3 4.4E-05 42.4 8.4 99 174-312 166-269 (351)
422 1edo_A Beta-keto acyl carrier 88.5 4.1 0.00014 35.9 11.3 78 180-259 2-89 (244)
423 2ae2_A Protein (tropinone redu 88.4 5.5 0.00019 35.8 12.3 79 178-258 8-96 (260)
424 1xg5_A ARPG836; short chain de 88.4 7.3 0.00025 35.3 13.2 80 178-258 31-120 (279)
425 4ibo_A Gluconate dehydrogenase 88.3 3.4 0.00012 37.7 10.9 80 178-259 25-113 (271)
426 3ftp_A 3-oxoacyl-[acyl-carrier 88.3 4.1 0.00014 37.1 11.5 81 178-260 27-116 (270)
427 3v2h_A D-beta-hydroxybutyrate 88.3 5.6 0.00019 36.4 12.4 80 179-259 25-114 (281)
428 4dry_A 3-oxoacyl-[acyl-carrier 88.2 4.8 0.00016 36.9 11.9 80 178-258 32-120 (281)
429 3r3s_A Oxidoreductase; structu 88.1 8.3 0.00028 35.5 13.6 124 178-313 48-186 (294)
430 1w6u_A 2,4-dienoyl-COA reducta 88.1 6.8 0.00023 35.8 12.9 80 178-259 25-114 (302)
431 1iz0_A Quinone oxidoreductase; 88.1 0.24 8.3E-06 46.2 2.9 70 176-255 123-195 (302)
432 3e9n_A Putative short-chain de 88.1 5.5 0.00019 35.3 12.0 74 179-259 5-85 (245)
433 3nzo_A UDP-N-acetylglucosamine 88.0 7.1 0.00024 37.8 13.6 80 179-259 35-122 (399)
434 2rhc_B Actinorhodin polyketide 88.0 6 0.0002 36.0 12.4 79 178-258 21-108 (277)
435 1eg2_A Modification methylase 88.0 0.15 5.2E-06 48.7 1.4 65 231-311 39-105 (319)
436 3e8x_A Putative NAD-dependent 88.0 3.1 0.00011 36.6 10.2 71 178-258 20-93 (236)
437 3afn_B Carbonyl reductase; alp 88.0 2.2 7.7E-05 37.9 9.3 79 178-258 6-94 (258)
438 3guy_A Short-chain dehydrogena 88.0 4.4 0.00015 35.6 11.1 117 182-313 4-130 (230)
439 3tfo_A Putative 3-oxoacyl-(acy 87.9 4.2 0.00014 37.1 11.2 78 179-258 4-90 (264)
440 1geg_A Acetoin reductase; SDR 87.9 6.5 0.00022 35.2 12.4 77 180-258 3-88 (256)
441 1wly_A CAAR, 2-haloacrylate re 87.8 1.5 5.1E-05 41.3 8.3 97 174-311 141-243 (333)
442 1qor_A Quinone oxidoreductase; 87.7 0.67 2.3E-05 43.6 5.7 98 174-311 136-238 (327)
443 1tt7_A YHFP; alcohol dehydroge 87.7 0.53 1.8E-05 44.4 5.0 97 175-311 146-246 (330)
444 2b4q_A Rhamnolipids biosynthes 87.6 3.5 0.00012 37.7 10.5 79 178-259 28-115 (276)
445 2zb4_A Prostaglandin reductase 87.4 0.53 1.8E-05 45.0 4.9 98 174-311 154-259 (357)
446 3nyw_A Putative oxidoreductase 87.4 2.5 8.6E-05 38.0 9.3 81 178-259 6-97 (250)
447 3oec_A Carveol dehydrogenase ( 87.4 6.3 0.00022 36.8 12.4 83 178-262 45-148 (317)
448 1yqd_A Sinapyl alcohol dehydro 87.4 0.51 1.8E-05 45.4 4.8 72 175-255 183-257 (366)
449 3enk_A UDP-glucose 4-epimerase 87.3 1 3.5E-05 42.0 6.8 79 179-258 5-87 (341)
450 1gee_A Glucose 1-dehydrogenase 87.0 7 0.00024 34.8 12.0 80 178-259 6-95 (261)
451 2p91_A Enoyl-[acyl-carrier-pro 87.0 5 0.00017 36.7 11.2 128 178-313 20-161 (285)
452 1e7w_A Pteridine reductase; di 86.9 14 0.00047 33.8 14.3 63 178-242 8-73 (291)
453 3sju_A Keto reductase; short-c 86.9 4.9 0.00017 36.7 11.1 81 178-260 23-112 (279)
454 2gn4_A FLAA1 protein, UDP-GLCN 86.8 2.6 9E-05 39.9 9.4 75 178-258 20-100 (344)
455 3v8b_A Putative dehydrogenase, 86.8 6.2 0.00021 36.2 11.7 80 178-259 27-115 (283)
456 2ph3_A 3-oxoacyl-[acyl carrier 86.7 6.1 0.00021 34.7 11.4 78 181-259 3-90 (245)
457 1ae1_A Tropinone reductase-I; 86.7 6.6 0.00023 35.6 11.8 79 178-258 20-108 (273)
458 3t4x_A Oxidoreductase, short c 86.6 7.7 0.00026 35.0 12.2 81 178-259 9-95 (267)
459 3sx2_A Putative 3-ketoacyl-(ac 86.5 7.2 0.00025 35.3 12.0 79 178-258 12-111 (278)
460 4e6p_A Probable sorbitol dehyd 86.5 7.2 0.00025 35.0 11.8 78 178-260 7-93 (259)
461 3cxt_A Dehydrogenase with diff 86.4 6.1 0.00021 36.4 11.6 79 178-258 33-120 (291)
462 2j8z_A Quinone oxidoreductase; 86.2 2.2 7.6E-05 40.6 8.6 75 174-255 158-237 (354)
463 2hq1_A Glucose/ribitol dehydro 86.1 3 0.0001 37.0 8.9 80 178-259 4-93 (247)
464 3pi7_A NADH oxidoreductase; gr 86.1 1 3.6E-05 42.8 6.2 73 177-255 162-239 (349)
465 3t7c_A Carveol dehydrogenase; 86.1 8.7 0.0003 35.4 12.5 79 178-258 27-126 (299)
466 3imf_A Short chain dehydrogena 86.0 5.3 0.00018 35.9 10.7 79 178-258 5-92 (257)
467 3awd_A GOX2181, putative polyo 86.0 8.8 0.0003 34.0 12.1 79 178-258 12-99 (260)
468 3tsc_A Putative oxidoreductase 86.0 7.6 0.00026 35.2 11.9 80 178-259 10-111 (277)
469 3ksu_A 3-oxoacyl-acyl carrier 86.0 5.8 0.0002 35.9 11.0 123 178-313 10-148 (262)
470 3s55_A Putative short-chain de 86.0 10 0.00036 34.3 12.8 81 178-260 9-110 (281)
471 3ius_A Uncharacterized conserv 85.9 6.6 0.00023 35.4 11.4 66 180-258 6-72 (286)
472 2ehd_A Oxidoreductase, oxidore 85.9 4.4 0.00015 35.6 9.9 74 179-258 5-87 (234)
473 1hxh_A 3BETA/17BETA-hydroxyste 85.8 9.6 0.00033 34.0 12.3 121 178-313 5-138 (253)
474 3u5t_A 3-oxoacyl-[acyl-carrier 85.7 4.4 0.00015 36.9 10.0 123 178-313 26-162 (267)
475 4fn4_A Short chain dehydrogena 85.7 7 0.00024 35.7 11.3 79 178-258 6-93 (254)
476 4dqx_A Probable oxidoreductase 85.6 11 0.00037 34.4 12.8 122 178-313 26-160 (277)
477 3ijr_A Oxidoreductase, short c 85.5 13 0.00046 34.0 13.4 124 178-313 46-183 (291)
478 2qhx_A Pteridine reductase 1; 85.4 13 0.00045 34.8 13.5 63 178-242 45-110 (328)
479 4fc7_A Peroxisomal 2,4-dienoyl 85.3 5.1 0.00017 36.5 10.3 79 178-258 26-114 (277)
480 3f9i_A 3-oxoacyl-[acyl-carrier 85.3 7.5 0.00026 34.4 11.2 78 178-260 13-95 (249)
481 2pd4_A Enoyl-[acyl-carrier-pro 85.3 3.9 0.00013 37.2 9.5 127 178-313 5-145 (275)
482 3gaz_A Alcohol dehydrogenase s 85.2 0.76 2.6E-05 43.7 4.7 94 174-311 146-245 (343)
483 2hwk_A Helicase NSP2; rossman 85.2 1.4 4.9E-05 41.3 6.2 86 235-338 195-281 (320)
484 3oid_A Enoyl-[acyl-carrier-pro 85.2 7.8 0.00027 34.9 11.4 79 178-258 3-91 (258)
485 2a4k_A 3-oxoacyl-[acyl carrier 85.1 5.6 0.00019 36.0 10.4 121 178-314 5-138 (263)
486 2wsb_A Galactitol dehydrogenas 85.0 7 0.00024 34.6 10.9 79 178-261 10-97 (254)
487 1sny_A Sniffer CG10964-PA; alp 85.0 6 0.00021 35.4 10.5 77 179-258 21-111 (267)
488 4f6c_A AUSA reductase domain p 85.0 7 0.00024 37.8 11.7 80 178-258 68-159 (427)
489 4da9_A Short-chain dehydrogena 84.9 6.6 0.00022 35.9 10.9 79 178-258 28-116 (280)
490 4a27_A Synaptic vesicle membra 84.9 0.68 2.3E-05 44.2 4.1 95 174-311 138-237 (349)
491 2uvd_A 3-oxoacyl-(acyl-carrier 84.8 8.6 0.00029 34.1 11.4 79 179-259 4-92 (246)
492 1yxm_A Pecra, peroxisomal tran 84.6 10 0.00035 34.6 12.1 79 178-258 17-109 (303)
493 1xq1_A Putative tropinone redu 84.5 8.2 0.00028 34.5 11.2 79 178-258 13-101 (266)
494 3ojo_A CAP5O; rossmann fold, c 84.5 4.4 0.00015 40.1 10.0 114 188-332 18-148 (431)
495 1vl8_A Gluconate 5-dehydrogena 84.5 10 0.00034 34.3 11.8 80 178-259 20-109 (267)
496 3ai3_A NADPH-sorbose reductase 84.4 9.3 0.00032 34.2 11.6 80 178-259 6-95 (263)
497 3uve_A Carveol dehydrogenase ( 84.3 9.2 0.00031 34.8 11.6 79 178-258 10-113 (286)
498 1zk4_A R-specific alcohol dehy 84.2 11 0.00036 33.3 11.7 78 178-258 5-91 (251)
499 3dqp_A Oxidoreductase YLBE; al 84.1 4.8 0.00016 34.9 9.2 69 181-261 2-75 (219)
500 3osu_A 3-oxoacyl-[acyl-carrier 84.0 13 0.00043 33.0 12.1 124 179-313 4-141 (246)
No 1
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.1e-65 Score=498.42 Aligned_cols=308 Identities=37% Similarity=0.666 Sum_probs=273.3
Q ss_pred hhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEecC
Q 016730 66 LDLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDS 145 (384)
Q Consensus 66 ~~~~~~~~~p~wl~~~l~~~~~~~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~ 145 (384)
+.++++|++|.||+++|.+.|| ++++++++++++++|+++|||++|++++++.+.|.+.|+.+++. +|++.++.+...
T Consensus 8 ~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~ 85 (315)
T 1ixk_A 8 LDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRV-PWAKEGFCLTRE 85 (315)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEE-TTEEEEEEEEEC
T ss_pred HHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeEC-CCCCceEEEeCC
Confidence 4688999999999999999999 88999999999999999999999999999999999999999888 899999887555
Q ss_pred CCCCCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHH
Q 016730 146 QVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR 225 (384)
Q Consensus 146 ~~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r 225 (384)
+.++..+++|.+|++++||.+|++++.++++++|++|||+|||||++|+++++.+++.+.|+|+|+++.+++.+++|+++
T Consensus 86 ~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~ 165 (315)
T 1ixk_A 86 PFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR 165 (315)
T ss_dssp SSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 55689999999999999999999999999999999999999999999999999997778999999999999999999999
Q ss_pred cCCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC
Q 016730 226 MGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (384)
Q Consensus 226 ~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG 305 (384)
+|+.++.++++|+..++.. .+.||+|++||||||+|+++++|+++|.++++++..+...|.++|.+++++| |||
T Consensus 166 ~g~~~v~~~~~D~~~~~~~--~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~L----kpG 239 (315)
T 1ixk_A 166 LGVLNVILFHSSSLHIGEL--NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVL----KPG 239 (315)
T ss_dssp HTCCSEEEESSCGGGGGGG--CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHE----EEE
T ss_pred hCCCeEEEEECChhhcccc--cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhC----CCC
Confidence 9999999999999887642 3689999999999999999999999999999999999999999999999997 999
Q ss_pred cEEEEEeccCCccccHHHHHHHHhcCCCEEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 306 GYIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 306 G~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
|+|||+|||++++|||++|++++++++++++++. .+.+|+..|....+.+...+++|++||.+++||||+|+|+|.
T Consensus 240 G~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 240 GILVYSTCSLEPEENEFVIQWALDNFDVELLPLK--YGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHSSEEEECCC--SSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred CEEEEEeCCCChHHhHHHHHHHHhcCCCEEecCC--ccccCcccccccccccccCCEEEECCCCCCcccEEEEEEEEC
Confidence 9999999999999999999999999999988764 333455444444444445678999999999999999999984
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=4.8e-63 Score=502.43 Aligned_cols=294 Identities=31% Similarity=0.451 Sum_probs=258.6
Q ss_pred HhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCC-eEEEEcCCCCCHHHHHHHHHHcCCccc---CCCccccccEEEecCC
Q 016730 71 YYGYNEFLIGALVEMFPPVELMELIESFEKPRP-ICLRTNTLKTRRRDLADVLINRGVNLD---PLSKWSKVGLVVYDSQ 146 (384)
Q Consensus 71 ~~~~p~wl~~~l~~~~~~~~~~~~~~~~~~~~p-~~~RvN~~k~~~~~~~~~L~~~g~~~~---~~~~~~~~~~~~~~~~ 146 (384)
.+++|+||+++|.+.|| ++++++++++++++| +++|||++|+ +++.+.+ |+.++ ++ +|++.+++ . .
T Consensus 5 ~~~~P~w~~~~~~~~~g-~e~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~---~~~~~~~~~~-~~~~~~~~--~-~ 74 (456)
T 3m4x_A 5 ATTLPQQFIKKYRLLLG-EEASDFFSALEQGSVKKGFRWNPLKP--AGLDMVQ---TYHSEELQPA-PYSNEGFL--G-T 74 (456)
T ss_dssp --CCCHHHHHHHHHHHG-GGHHHHHHHHHHCCCCCEEECCTTST--THHHHHH---HHTCSSCCBC-TTCTTEEE--S-C
T ss_pred hhhChHHHHHHHHHHhC-HHHHHHHHHcCCCCCCcEEEEcCccH--HHHHHhc---CCcccccCCC-CCCcceEE--c-C
Confidence 47899999999999999 569999999999999 9999999998 5665543 66666 77 89999987 2 2
Q ss_pred CCCCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc
Q 016730 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (384)
Q Consensus 147 ~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~ 226 (384)
.++.+|+|.+|.|++||++|++++.+|++++|++|||+|||||+||+++++++++.+.|+|+|+++.|++.+++|++++
T Consensus 75 -~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~ 153 (456)
T 3m4x_A 75 -VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW 153 (456)
T ss_dssp -CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred -CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc
Q 016730 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (384)
Q Consensus 227 g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG 306 (384)
|+.|+.+++.|+..+.... .+.||+||+||||||+|+++++|+++|.++++++..++.+|+++|.+|+++| ||||
T Consensus 154 g~~nv~v~~~Da~~l~~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG 228 (456)
T 3m4x_A 154 GVSNAIVTNHAPAELVPHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKML----KNKG 228 (456)
T ss_dssp TCSSEEEECCCHHHHHHHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTE----EEEE
T ss_pred CCCceEEEeCCHHHhhhhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCc
Confidence 9999999999998775433 3689999999999999999999999999999999999999999999999997 9999
Q ss_pred EEEEEeccCCccccHHHHHHHHhcCCCEEeecCCCCC-CCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 307 YIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 307 ~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
+|||||||++++|||++|++++++++++++++....+ .++...|... +....++|++||.+++||||+|+|+|.
T Consensus 229 ~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~r~~P~~~~~dGFF~A~l~k~ 303 (456)
T 3m4x_A 229 QLIYSTCTFAPEENEEIISWLVENYPVTIEEIPLTQSVSSGRSEWGSV---AGLEKTIRIWPHKDQGEGHFVAKLTFH 303 (456)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHSSEEEECCCCSSCCEECCGGGSSS---TTGGGSEEECTTTSSSSCEEEEEEEEC
T ss_pred EEEEEEeecccccCHHHHHHHHHhCCCEEEeccccccccccccccccc---cccCCeEEECCCCCCCcCeEEEEEEEC
Confidence 9999999999999999999999988899988753221 1222222211 234568999999999999999999984
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.7e-62 Score=499.14 Aligned_cols=296 Identities=32% Similarity=0.503 Sum_probs=264.2
Q ss_pred ChHHHHHHHHHhCCHHHHHHHHHHcCCC-CCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEecCCCCCCCC
Q 016730 74 YNEFLIGALVEMFPPVELMELIESFEKP-RPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGAT 152 (384)
Q Consensus 74 ~p~wl~~~l~~~~~~~~~~~~~~~~~~~-~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (384)
+|+||+++|.+.|| +++++++++++++ +|+++|||++|++++++.+.| |+.++++ +|++.++++ .....+..+
T Consensus 2 lP~w~~~~~~~~~g-~e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l---~~~~~~~-~~~~~g~~l-~~~~~~~~~ 75 (464)
T 3m6w_A 2 LPKAFLSRMAELLG-EEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRIS---PWPLRPI-PWCQEGFYY-PEEARPGPH 75 (464)
T ss_dssp CCHHHHHHHHHHHG-GGHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHC---SSCCEEE-TTEEEEEEC-CTTCCCSSS
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHc---CCCceec-CCCCceEEE-CCCCCcccC
Confidence 79999999999999 6799999999999 999999999999999998876 7888887 899999885 444467999
Q ss_pred cccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEE
Q 016730 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI 232 (384)
Q Consensus 153 ~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~ 232 (384)
|+|.+|.|++||++|++++.++++++|++|||+|||||+||+++++++++.+.|+|+|+|+.|++.+++|++++|+. +.
T Consensus 76 ~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~ 154 (464)
T 3m6w_A 76 PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LA 154 (464)
T ss_dssp HHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CE
T ss_pred hHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EE
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999998 99
Q ss_pred EEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 233 VCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 233 ~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
++++|+..++... .+.||+|++||||||+|+++++|+++|.++++++..++..|+++|.+|+++| ||||+|||||
T Consensus 155 ~~~~Da~~l~~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG~LvysT 229 (464)
T 3m6w_A 155 VTQAPPRALAEAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLL----GPGGVLVYST 229 (464)
T ss_dssp EECSCHHHHHHHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEECCHHHhhhhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEe
Confidence 9999998876433 3689999999999999999999999999999999999999999999999997 9999999999
Q ss_pred ccCCccccHHHHHHHHhcC-CCEEeecCCCCC-CCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 313 CSIMVTENEAVIDYALKKR-DVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 313 CSi~~~ENe~vv~~~l~~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
||++++|||++|+++++++ +++++++....+ .+|...|... .+...+++|++||.+++||||+|+|+|.
T Consensus 230 Cs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 300 (464)
T 3m6w_A 230 CTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEG--NPELLKTARLWPHRLEGEGHFLARFRKE 300 (464)
T ss_dssp SCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTT--CGGGGGSEEECTTTSSSSCEEEEEEEEC
T ss_pred ccCchhcCHHHHHHHHHHCCCcEEEecccccccccCccccccc--ccccCCeEEECCCCCCceeEEEEEEEEC
Confidence 9999999999999999877 799988754322 1222222211 1234568999999999999999999985
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.3e-61 Score=492.97 Aligned_cols=299 Identities=34% Similarity=0.561 Sum_probs=259.7
Q ss_pred HhcChHHHHHHHHHhCCHH-HHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEecCC---
Q 016730 71 YYGYNEFLIGALVEMFPPV-ELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQ--- 146 (384)
Q Consensus 71 ~~~~p~wl~~~l~~~~~~~-~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~--- 146 (384)
.|++|.|++++|.+.||.+ +++++++++++++|+++|||++|++++++.+.|.+.|+.++++ +|++.++.+....
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPI-PWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEE-TTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeec-CCCCceEEEecCcccc
Confidence 5799999999999999976 5799999999999999999999999999999999999999998 8999988753221
Q ss_pred CCCCCCcccccceEEEeCCcCcchhhhcCCC--CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHH
Q 016730 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQ--EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (384)
Q Consensus 147 ~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~--~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~ 224 (384)
.+++.+|+|.+|.|++||++|++++.+|+++ +|++|||+|||||+||++|++++++.+.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 2678899999999999999999999999998 99999999999999999999999877999999999999999999999
Q ss_pred HcCCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC
Q 016730 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (384)
Q Consensus 225 r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp 304 (384)
++|+.++.++++|+..++... .+.||+|++||||||+|+++++|+++|.|+++++..++.+|+++|.+|+++| ||
T Consensus 164 r~g~~nv~~~~~D~~~~~~~~-~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 238 (479)
T 2frx_A 164 RCGISNVALTHFDGRVFGAAV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL----RP 238 (479)
T ss_dssp HHTCCSEEEECCCSTTHHHHS-TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE----EE
T ss_pred HcCCCcEEEEeCCHHHhhhhc-cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc----CC
Confidence 999999999999999875422 3689999999999999999999999999999999999999999999999997 99
Q ss_pred CcEEEEEeccCCccccHHHHHHHHhcC-CC-EEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEe
Q 016730 305 GGYIVYSTCSIMVTENEAVIDYALKKR-DV-KLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYL 382 (384)
Q Consensus 305 GG~lvYsTCSi~~~ENe~vv~~~l~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~ 382 (384)
||+|||||||++++|||++|+++++++ ++ +++++... .++.... ....+++|++||.+++||||+|+|+|
T Consensus 239 GG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~--~~~~~~~------~~~~g~~r~~P~~~~~dGfF~A~l~k 310 (479)
T 2frx_A 239 GGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDL--FPGANKA------LTEEGFLHVFPQIYDCEGFFVARLRK 310 (479)
T ss_dssp EEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTS--STTGGGG------BCTTSCEEECTTTTTSCCEEEEEEEE
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHCCCceeccccccc--ccccccc------cccCCeEEECCCCCCcCccEEEEEEE
Confidence 999999999999999999999999876 44 55544211 1221100 01245689999999999999999998
Q ss_pred c
Q 016730 383 D 383 (384)
Q Consensus 383 ~ 383 (384)
.
T Consensus 311 ~ 311 (479)
T 2frx_A 311 T 311 (479)
T ss_dssp C
T ss_pred c
Confidence 5
No 5
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1e-60 Score=486.65 Aligned_cols=299 Identities=32% Similarity=0.478 Sum_probs=272.6
Q ss_pred hhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcC-CCCCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEec
Q 016730 66 LDLGSYYGYNEFLIGALVEMFPPVELMELIESFE-KPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYD 144 (384)
Q Consensus 66 ~~~~~~~~~p~wl~~~l~~~~~~~~~~~~~~~~~-~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~ 144 (384)
..+++.|++|.||+++|.+.|| +++++++++++ +++|+++|||++|++++++.+.|.+.|+.+.+. +|++.++.+.
T Consensus 149 ~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~- 225 (450)
T 2yxl_A 149 EELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRS-ERVPTILKIK- 225 (450)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEEC-SSCTTEEEEE-
T ss_pred hhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCccceec-CccCceEEeC-
Confidence 3577889999999999999999 88999999999 999999999999999999999999999998887 8999998864
Q ss_pred CCCCCCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHH
Q 016730 145 SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (384)
Q Consensus 145 ~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~ 224 (384)
....+..++.|.+|++++||.+|++++.++++++|++|||+|||||+||+++++.+++.+.|+|+|+++.+++.+++|++
T Consensus 226 ~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 226 GPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp SCCCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999999999999999999999777899999999999999999999
Q ss_pred HcCCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC
Q 016730 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (384)
Q Consensus 225 r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp 304 (384)
++|+.++.++++|+..++..+..+.||+|++||||||+|+++++|+++|.++++++..+..+|.++|.+++++| ||
T Consensus 306 ~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 381 (450)
T 2yxl_A 306 RMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV----KP 381 (450)
T ss_dssp HTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE----EE
T ss_pred HcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 99999999999999887644434679999999999999999999999999999999999999999999999997 99
Q ss_pred CcEEEEEeccCCccccHHHHHHHHhcC-CCEEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 305 GGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 305 GG~lvYsTCSi~~~ENe~vv~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
||+|||+|||++++|||++|..+++++ +++++++...+ ++ + ...+++|++||.+++||||+|+|+|+
T Consensus 382 GG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~--~~--------~--~~~~~~~~~P~~~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 382 GGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY--DP--------G--FLEGTMRAWPHRHSTIGFFYALLEKS 449 (450)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSS--EE--------C--SSTTCEEECHHHHSSCCEEEEEEECC
T ss_pred CcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccccc--cc--------c--cCCCeEEECCCCCCCCceEEEEEEEC
Confidence 999999999999999999999988876 79988764322 11 1 13467999999999999999999985
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=2.8e-60 Score=480.59 Aligned_cols=321 Identities=29% Similarity=0.430 Sum_probs=278.6
Q ss_pred HHHHHHHHHHhcccccccC----------CCHHHHHHHhhhhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeE
Q 016730 36 RIKEIVRVLSNFKDLSQKG----------TSRKEYVQQLKLDLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPIC 105 (384)
Q Consensus 36 ri~~~v~~~~~~~~~~~~~----------r~~~~~~~~~~~~~~~~~~~p~wl~~~l~~~~~~~~~~~~~~~~~~~~p~~ 105 (384)
-|+|+|++.+.+...+..+ |..+++.......++ +|++|.||+++|.+.|| ++++++++++++++|++
T Consensus 98 ~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~~~~~~~~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~ 175 (429)
T 1sqg_A 98 ALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMW 175 (429)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHHHTTSGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEE
T ss_pred hhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcccccchhhhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeE
Confidence 4788999888876544321 111222211122244 79999999999999999 78999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEecCCCCCCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEe
Q 016730 106 LRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDM 185 (384)
Q Consensus 106 ~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~ 185 (384)
+|||++|++++++.+.|.+.|+...+. +|++.++.+ ..+.++..+|+|..|.+++||.+|++++.++++++|++|||+
T Consensus 176 ~Rvn~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDl 253 (429)
T 1sqg_A 176 LRINRTHHSRDSWLALLDEAGMKGFPH-ADYPDAVRL-ETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDL 253 (429)
T ss_dssp EEECTTTCCHHHHHHHHHHTTCCEECC-TTCTTEEEE-SSCCCGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEE
T ss_pred EEEcCCCCCHHHHHHHHHhCCCceeec-CCCCCEEEE-CCCCCcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEE
Confidence 999999999999999999999999888 899999875 445678899999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcC
Q 016730 186 AAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVI 265 (384)
Q Consensus 186 cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~ 265 (384)
|||||+||+++++.+++ +.|+|+|+++.+++.+++|++++|+. +.++++|+..++..+..+.||+|++||||||+|++
T Consensus 254 gaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~ 331 (429)
T 1sqg_A 254 CAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVI 331 (429)
T ss_dssp SCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGT
T ss_pred CCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhhcccCCCCEEEEeCCCCccccc
Confidence 99999999999999876 89999999999999999999999985 68889999987654444689999999999999999
Q ss_pred CCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcC-CCEEeecCCCCCC
Q 016730 266 SKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGR 344 (384)
Q Consensus 266 ~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~-~~~l~~~~~~~~~ 344 (384)
+++|+++|.+++.++..++..|.++|.+++++| ||||+|||+|||++++|||++|..+++++ ++++++. +
T Consensus 332 ~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L----kpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~----~- 402 (429)
T 1sqg_A 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL----KTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCET----G- 402 (429)
T ss_dssp TTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE----EEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECSS----B-
T ss_pred CCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeCC----C-
Confidence 999999999999999999999999999999996 99999999999999999999999888765 7888761 1
Q ss_pred CCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 345 QGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
. ....++|++||.+++||||+|+|+|.
T Consensus 403 --~----------~~~~~~~~~P~~~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 403 --T----------PEQPGKQNLPGAEEGDGFFYAKLIKK 429 (429)
T ss_dssp --C----------SSSBSEEECCCTTSCCSEEEEEEEC-
T ss_pred --C----------CCCCeEEECCCCCCCCceEEEEEEEC
Confidence 0 02345899999999999999999984
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=5.2e-59 Score=452.16 Aligned_cols=272 Identities=32% Similarity=0.431 Sum_probs=219.3
Q ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccc------------------cccEEEecCCCCCCCCcccccceE
Q 016730 99 EKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWS------------------KVGLVVYDSQVPIGATPEYMAGFY 160 (384)
Q Consensus 99 ~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~G~~ 160 (384)
..++|+++|||++|++++++.+.|++.|+.+++. +|+ +.++.+ ....++..+|+|++|.|
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~~~~~~~~~G~~ 84 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGR-ASSLDDLRALKGKHFLLDPLMPELLVF-PAQTDLHEHPLYRAGHL 84 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEE-CSSHHHHHTCCTTEEEECSSSTTEEEE-CTTCCCTTSHHHHTTSE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeec-cccccccccccccccccccCCCceEEe-CCCCCcccChHHHCCeE
Confidence 4789999999999999999999999999988775 443 344443 44457899999999999
Q ss_pred EEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC
Q 016730 161 MLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (384)
Q Consensus 161 ~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~ 240 (384)
++||++|++++.+|++++|++|||+|||||+||+++++++++.+.|+|+|+++.|++.+++|++++|+.|+.++++|+..
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 99999999999999999999999999999999999999998779999999999999999999999999999999999887
Q ss_pred cccccC-CCCCCEEEEcCCCCCCCcCCCCchhhccC--CHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 241 LPKVLG-LNTVDRVLLDAPCSGTGVISKDESVKTSK--SLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 241 ~~~~~~-~~~fD~VllDaPCSg~G~~~r~p~~~~~~--~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
+..... ...||+||+||||||+|+++++||++|.+ +++++..++.+|++||.+|++++ + ||+|||||||+++
T Consensus 165 ~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l----~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP----S-LQRLVYSTCSLCQ 239 (309)
T ss_dssp SCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT----T-CCEEEEEESCCCG
T ss_pred cCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc----C-CCEEEEECCCCCh
Confidence 643211 14799999999999999999999998854 67899999999999999999985 6 9999999999999
Q ss_pred cccHHHHHHHHhcC-C-CEEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 318 TENEAVIDYALKKR-D-VKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 318 ~ENe~vv~~~l~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
+|||++|+++|+++ + ++++++...+...|... .+...+++|++||.+++||||+|+|+|.
T Consensus 240 ~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 301 (309)
T 2b9e_A 240 EENEDVVRDALQQNPGAFRLAPALPAWPHRGLST------FPGAEHCLRASPETTLSSGFFVAVIERV 301 (309)
T ss_dssp GGTHHHHHHHHTTSTTTEEECCCCTTCCCBCCSS------STTGGGSEEECHHHHSSCSEEEEEEEEC
T ss_pred HHhHHHHHHHHHhCCCcEEEeccccccccccccc------cCCCCCeEEECCCCCCCCCeEEEEEEEC
Confidence 99999999999876 6 88887643332222211 1224578999999999999999999985
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=6.8e-58 Score=451.41 Aligned_cols=294 Identities=24% Similarity=0.308 Sum_probs=232.7
Q ss_pred HHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCcc-----------c--------CCC-cc-cccc
Q 016730 81 ALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNL-----------D--------PLS-KW-SKVG 139 (384)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~-----------~--------~~~-~~-~~~~ 139 (384)
++...|| ++|..+.+++.++++..+|||+.. ..+++.+.|+..|..- + |.. .| .+..
T Consensus 26 ~Y~~~~G-~~W~~~r~aL~~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 103 (359)
T 4fzv_A 26 TYSVQFG-DLWPSIRVSLLSEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPN 103 (359)
T ss_dssp HHHHHHG-GGHHHHHHHHTSCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHHSCSS
T ss_pred HHHHHhh-hhhHHHHHHHcCcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCcccccCCcc
Confidence 3346778 689999999999999999999985 5788888988877520 0 000 11 1111
Q ss_pred E-EEecCCCCCCCCcccccce-----EEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCH
Q 016730 140 L-VVYDSQVPIGATPEYMAGF-----YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA 213 (384)
Q Consensus 140 ~-~~~~~~~~~~~~~~~~~G~-----~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~ 213 (384)
+ .+.....++..+|.|..|. |++||++||+++.+|+++||++||||||||||||+||++++.+ +.|+|+|+++
T Consensus 104 l~~~~~~~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~ 182 (359)
T 4fzv_A 104 LRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSP 182 (359)
T ss_dssp CCEEECCTTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCH
T ss_pred ceEEecCCCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCH
Confidence 1 1122334678888887664 8889999999999999999999999999999999999998754 7899999999
Q ss_pred HHHHHHHHHHHHcCC------ceEEEEecCCCCcccccCCCCCCEEEEcCCCCCC--CcCCCCchhhccCCHHHHHHHHH
Q 016730 214 SRLKSLTANLHRMGV------TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT--GVISKDESVKTSKSLEDIQKCSY 285 (384)
Q Consensus 214 ~rl~~l~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~--G~~~r~p~~~~~~~~~~i~~l~~ 285 (384)
.|++.+++|++++|+ .++.+.+.|++.++... .+.||+||+||||||+ |+++++|+++|.++++++..++.
T Consensus 183 ~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~ 261 (359)
T 4fzv_A 183 SRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPV 261 (359)
T ss_dssp HHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHH
T ss_pred HHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHH
Confidence 999999999999987 36889999998876543 4789999999999997 88999999999999999999999
Q ss_pred HHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcC-CCEEeecCCCCCCCCcc--cccccccCCCcCCe
Q 016730 286 LQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFV--RFREHRFHPSLEKT 362 (384)
Q Consensus 286 ~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~-~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 362 (384)
+|++||.+|+++| ||||+|||||||++++|||+||++||+++ ++..+++... +.+.+. ......|.+....+
T Consensus 262 lQ~~iL~~a~~~l----kpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~g 336 (359)
T 4fzv_A 262 LQVQLLAAGLLAT----KPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVE-DLTHFRRVFMDTFCFFSSCQVG 336 (359)
T ss_dssp HHHHHHHHHHHTE----EEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEEC-CCHHHHHHHTTTCEECTTCSSS
T ss_pred HHHHHHHHHHhcC----CCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCcccccccc-cccccccccccccccCccccce
Confidence 9999999999997 99999999999999999999999999864 3322222110 000000 01122345566788
Q ss_pred eEEcCCCC-CCCceeEEEEEec
Q 016730 363 RRFYPHVH-NMDGFFVAKVYLD 383 (384)
Q Consensus 363 ~r~~P~~~-~~dGFF~A~l~~~ 383 (384)
+|++||.+ ++||||+|+|+|.
T Consensus 337 ~r~~P~~~~~~gGFFiA~L~Kv 358 (359)
T 4fzv_A 337 ELVIPNLMANFGPMYFCKMRRL 358 (359)
T ss_dssp EEEECBTTBCCCCEEEEEEEEC
T ss_pred EEECCCCCCCCCCEEEEEEEEC
Confidence 99999965 6788999999984
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=7.5e-52 Score=394.97 Aligned_cols=270 Identities=42% Similarity=0.614 Sum_probs=219.8
Q ss_pred HHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCcccCCCccccccEEEecCCCCCCCCcccccceEEEeCCcCcchhhhc
Q 016730 95 IESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMAL 174 (384)
Q Consensus 95 ~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~L 174 (384)
+.++++++|+++|||++|++++++.+.|.+.|+.+++ +|++.++.+.+.+.++..+|.|.+|+|++||.+|++++.++
T Consensus 2 m~~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l 79 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEK--TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVL 79 (274)
T ss_dssp -------CCEEEEECTTTCCHHHHHHHHHTTTCEEEE--CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHH
T ss_pred hhhhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC--CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHh
Confidence 4566789999999999999999999999999998887 78999988644556789999999999999999999999999
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--CCCCCCE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDR 252 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--~~~~fD~ 252 (384)
++++|++|||+|||||++|.++++++++.+.|+|+|+++.+++.+++|++++|+.++.++++|+..++..+ ..+.||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 99999999999999999999999998777899999999999999999999999999999999998765321 1368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhc-C
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK-R 331 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~-~ 331 (384)
|++||||||+|+++++| .++.+++..+...|.++|.+++++| ||||+|+|+|||++++|||++|++++++ .
T Consensus 160 Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLL----KKDGELVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHE----EEEEEEEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred EEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEEECCCChHHhHHHHHHHHHhCC
Confidence 99999999999999998 6788889899999999999999996 9999999999999999999999999865 5
Q ss_pred CCEEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEec
Q 016730 332 DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYLD 383 (384)
Q Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~~ 383 (384)
+++++++... ..+|+..|.. ...+++|++||.++ ||+|+|+|.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~P~~~~---ff~a~l~k~ 274 (274)
T 3ajd_A 232 DVELIIIKAN-EFKGINIKEG-----YIKGTLRVFPPNEP---FFIAKLRKI 274 (274)
T ss_dssp SEEEECCCST-TCTTSCEEEC-----SSTTCEEECTTSCC---EEEEEEEEC
T ss_pred CcEEecCccc-cccCcccccc-----cCCCeEEECCCCCC---EEEEEEEEC
Confidence 7999876532 1233333221 23578999999764 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.79 E-value=1.5e-19 Score=180.34 Aligned_cols=163 Identities=20% Similarity=0.233 Sum_probs=130.6
Q ss_pred CCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce
Q 016730 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (384)
Q Consensus 151 ~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~ 230 (384)
-..++++|.|..|+.++.++...+ ++|++|||+|||+|++|++++.. + ..|+|+|+|+.+++.+++|++.+|+.+
T Consensus 189 ~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~ 263 (393)
T 4dmg_A 189 LALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV 263 (393)
T ss_dssp TTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC
T ss_pred chhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC
Confidence 356788999999999887766554 46999999999999999999885 3 349999999999999999999999974
Q ss_pred EEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE
Q 016730 231 TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (384)
Q Consensus 231 v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY 310 (384)
.+.++|+..+..... +.||+|++||||- ..+..++......+.+++..+.++| ||||+|+|
T Consensus 264 -~~~~~D~~~~l~~~~-~~fD~Ii~dpP~f-------------~~~~~~~~~~~~~~~~ll~~a~~~L----kpGG~Lv~ 324 (393)
T 4dmg_A 264 -DIRHGEALPTLRGLE-GPFHHVLLDPPTL-------------VKRPEELPAMKRHLVDLVREALRLL----AEEGFLWL 324 (393)
T ss_dssp -EEEESCHHHHHHTCC-CCEEEEEECCCCC-------------CSSGGGHHHHHHHHHHHHHHHHHTE----EEEEEEEE
T ss_pred -cEEEccHHHHHHHhc-CCCCEEEECCCcC-------------CCCHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEE
Confidence 455888877543333 3499999999972 2334567778888999999999996 99999999
Q ss_pred EeccCCccccH--HHHHHHHhcC--CCEEee
Q 016730 311 STCSIMVTENE--AVIDYALKKR--DVKLVP 337 (384)
Q Consensus 311 sTCSi~~~ENe--~vv~~~l~~~--~~~l~~ 337 (384)
+|||.+..+++ ++|...+... .++++.
T Consensus 325 ~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 325 SSCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 99999998887 6777665543 455543
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.77 E-value=1.8e-18 Score=160.78 Aligned_cols=133 Identities=14% Similarity=0.145 Sum_probs=104.0
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~V 253 (384)
.+++|++|||+|||||++|.++++++++.|.|+|+|+++.+++.+.+..++. .|+.++.+|++..... ...+.||+|
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEE
Confidence 4789999999999999999999999988899999999999987776665543 5899999999875421 113689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHH-chhccCCCCcEEEEE---ec---cCCccccHHHHHH
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYS---TC---SIMVTENEAVIDY 326 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~-~L~~~lkpGG~lvYs---TC---Si~~~ENe~vv~~ 326 (384)
++|.|- | .|.++|...+. +| ||||+|+++ +| ++.++||.+.+..
T Consensus 151 ~~d~a~---------~----------------~~~~il~~~~~~~L----kpGG~lvisik~~~~d~t~~~~e~~~~~~~ 201 (232)
T 3id6_C 151 YVDIAQ---------P----------------DQTDIAIYNAKFFL----KVNGDMLLVIKARSIDVTKDPKEIYKTEVE 201 (232)
T ss_dssp EECCCC---------T----------------THHHHHHHHHHHHE----EEEEEEEEEEC-------CCSSSSTTHHHH
T ss_pred EecCCC---------h----------------hHHHHHHHHHHHhC----CCCeEEEEEEccCCcccCCCHHHHHHHHHH
Confidence 999871 1 24455554444 64 999999976 89 9999999988888
Q ss_pred HHhcCCCEEeec
Q 016730 327 ALKKRDVKLVPC 338 (384)
Q Consensus 327 ~l~~~~~~l~~~ 338 (384)
+|+.++++++..
T Consensus 202 ~L~~~gf~~~~~ 213 (232)
T 3id6_C 202 KLENSNFETIQI 213 (232)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 888888888764
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.73 E-value=2.3e-18 Score=171.12 Aligned_cols=163 Identities=23% Similarity=0.275 Sum_probs=129.1
Q ss_pred CCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce
Q 016730 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (384)
Q Consensus 151 ~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~ 230 (384)
...++.+|+|..|...+.+.+.+ +|++|||+|||+|+.+.+++.. ...|+++|+++.+++.+++|++.+|+.+
T Consensus 186 ~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~ 258 (382)
T 1wxx_A 186 LRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN 258 (382)
T ss_dssp CSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT
T ss_pred chhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 34567889888887765554443 7889999999999999999987 3689999999999999999999999988
Q ss_pred EEEEecCCCCccccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEE
Q 016730 231 TIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (384)
Q Consensus 231 v~~~~~D~~~~~~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~l 308 (384)
+.++++|+..+...+ ...+||+|++|||+.+. +...+......+.+++..+.++| +|||+|
T Consensus 259 ~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~~L----kpgG~l 321 (382)
T 1wxx_A 259 VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAK-------------GKKDVERAYRAYKEVNLRAIKLL----KEGGIL 321 (382)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCC-------------STTSHHHHHHHHHHHHHHHHHTE----EEEEEE
T ss_pred ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCC-------------ChhHHHHHHHHHHHHHHHHHHhc----CCCCEE
Confidence 999999987753321 13689999999997443 23345667778889999999996 999999
Q ss_pred EEEeccCCcccc--HHHHHHHHhcC--CCEEee
Q 016730 309 VYSTCSIMVTEN--EAVIDYALKKR--DVKLVP 337 (384)
Q Consensus 309 vYsTCSi~~~EN--e~vv~~~l~~~--~~~l~~ 337 (384)
+++|||.+..++ ++.+...+... .++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 322 ATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 999999988775 56676444444 456554
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.71 E-value=2.1e-17 Score=164.82 Aligned_cols=159 Identities=21% Similarity=0.196 Sum_probs=124.5
Q ss_pred cccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eE
Q 016730 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NT 231 (384)
Q Consensus 153 ~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v 231 (384)
.++++|+|..|.....++..++ ++|++|||+|||+|+.+.+++.. +.+.|+++|+++.+++.+++|++.+|+. ++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4577788877766655555443 47899999999999999999875 3468999999999999999999999997 89
Q ss_pred EEEecCCCCccccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEE
Q 016730 232 IVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (384)
Q Consensus 232 ~~~~~D~~~~~~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lv 309 (384)
.++++|+..+...+ ...+||+|++|||+.+. +...+......+.+++..++++| +|||+|+
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv 332 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ-------------HEKDLKAGLRAYFNVNFAGLNLV----KDGGILV 332 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS-------------SGGGHHHHHHHHHHHHHHHHTTE----EEEEEEE
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC-------------CHHHHHHHHHHHHHHHHHHHHhc----CCCcEEE
Confidence 99999987653221 13689999999996432 33455666777888999999986 9999999
Q ss_pred EEeccCCccc--cHHHHHHHHhcCC
Q 016730 310 YSTCSIMVTE--NEAVIDYALKKRD 332 (384)
Q Consensus 310 YsTCSi~~~E--Ne~vv~~~l~~~~ 332 (384)
|+||+.+..+ .++++.......+
T Consensus 333 ~~~~~~~~~~~~~~~~v~~~~~~~~ 357 (396)
T 2as0_A 333 TCSCSQHVDLQMFKDMIIAAGAKAG 357 (396)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHcC
Confidence 9999987655 4666665555444
No 14
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=1.7e-16 Score=148.79 Aligned_cols=166 Identities=16% Similarity=0.183 Sum_probs=115.4
Q ss_pred cceEEEeCCc-------CcchhhhcCCC-CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 016730 157 AGFYMLQSAS-------SFLPVMALAPQ-EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (384)
Q Consensus 157 ~G~~~~Qd~s-------s~l~~~~L~~~-~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~ 228 (384)
.+..++|+.. +.+.+.++.++ ++.+|||+|||+|..+..+++... +.|+|+|+++.+++.+++|+..+|+
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 4556678776 56667777788 899999999999999999888743 4899999999999999999999999
Q ss_pred c-eEEEEecCCCCcccccCCCCCCEEEEcCCCCCC---CcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC
Q 016730 229 T-NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT---GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (384)
Q Consensus 229 ~-~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~---G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp 304 (384)
. ++.++++|+..+...+..++||.|++||||... |....++.....+ .........++..+.++| ||
T Consensus 98 ~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~-----~~~~~~~~~~l~~~~~~L----kp 168 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIAR-----HEVMCTLEDTIRVAASLL----KQ 168 (259)
T ss_dssp TTTEEEECSCGGGGGGTSCTTCEEEEEECCCC----------------------------HHHHHHHHHHHHHE----EE
T ss_pred cccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhh-----ccccCCHHHHHHHHHHHc----cC
Confidence 7 599999999887654445789999999999766 4433222111111 011122346888888886 99
Q ss_pred CcEEEEEeccCCccccHHHHHHHHhcCCCEEee
Q 016730 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 305 GG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
||+++++. +.+....+...+++.+++...
T Consensus 169 gG~l~~~~----~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 169 GGKANFVH----RPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp EEEEEEEE----CTTTHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEEE----cHHHHHHHHHHHHHCCCceEE
Confidence 99999843 334444455556666665543
No 15
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.70 E-value=1.3e-17 Score=157.85 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=109.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..++...+ ...|+|+|+|+.+++.+++|++++|+.++.+.++|..... ..++||.|+++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~---~~~~fD~Iv~n 183 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---AGQQFAMIVSN 183 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---TTCCEEEEEEC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc---ccCCccEEEEC
Confidence 5678999999999999999998775 3799999999999999999999999988999999987642 23689999999
Q ss_pred CCCCCCC-------cCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHh
Q 016730 257 APCSGTG-------VISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (384)
Q Consensus 257 aPCSg~G-------~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~ 329 (384)
|||.+.+ ++...|...+..... .....++++..+.++| ||||++++..+. .+.+.+..+++
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~----g~~~~~~~l~~~~~~L----kpgG~l~~~~~~----~~~~~~~~~l~ 251 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADS----GMADIVHIIEQSRNAL----VSGGFLLLEHGW----QQGEAVRQAFI 251 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHH----HTHHHHHHHHHHGGGE----EEEEEEEEECCS----SCHHHHHHHHH
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCc----HHHHHHHHHHHHHHhc----CCCCEEEEEECc----hHHHHHHHHHH
Confidence 9998874 444555555442222 2234577889999886 999999997653 34445566666
Q ss_pred cCCC
Q 016730 330 KRDV 333 (384)
Q Consensus 330 ~~~~ 333 (384)
+.++
T Consensus 252 ~~Gf 255 (276)
T 2b3t_A 252 LAGY 255 (276)
T ss_dssp HTTC
T ss_pred HCCC
Confidence 6554
No 16
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.69 E-value=5.6e-18 Score=169.04 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=126.6
Q ss_pred CCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 016730 149 IGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (384)
Q Consensus 149 ~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~ 228 (384)
+...+++++|+|..|.....+++.+ .+|.+|||+|||+|+++.+++.. +.+.|+|+|+++.+++.+++|++.+|+
T Consensus 194 v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 194 VDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp ECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred EeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445678889998888776665554 57899999999999999999885 246899999999999999999999999
Q ss_pred -c-eEEEEecCCCCccccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC
Q 016730 229 -T-NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (384)
Q Consensus 229 -~-~v~~~~~D~~~~~~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp 304 (384)
. ++.++.+|+..+...+ .+.+||+|++|||+.+.+-- .+......+.+++..+++.| +|
T Consensus 269 ~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~-------------~~~~~~~~~~~~l~~~~~~L----kp 331 (396)
T 3c0k_A 269 DLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKS-------------QLMGACRGYKDINMLAIQLL----NE 331 (396)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSS-------------SSSCCCTHHHHHHHHHHHTE----EE
T ss_pred CccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChh-------------HHHHHHHHHHHHHHHHHHhc----CC
Confidence 7 8999999987753221 13689999999997554210 00111224567888999986 99
Q ss_pred CcEEEEEeccCCcc--ccHHHHHHHHhcC--CCEEee
Q 016730 305 GGYIVYSTCSIMVT--ENEAVIDYALKKR--DVKLVP 337 (384)
Q Consensus 305 GG~lvYsTCSi~~~--ENe~vv~~~l~~~--~~~l~~ 337 (384)
||++++++|+.+.. ++++++...+.+. .++++.
T Consensus 332 gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 332 GGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999999998776 6678887555444 455543
No 17
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.68 E-value=7.2e-18 Score=167.46 Aligned_cols=169 Identities=15% Similarity=0.051 Sum_probs=119.5
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc---------------CCceEEEEecCCCCcc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM---------------GVTNTIVCNYDGNELP 242 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~---------------g~~~v~~~~~D~~~~~ 242 (384)
+|.+|||+|||+|.+++.++..+++ ..|+++|+++.+++.+++|++++ |+.++.++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 6899999999999999999998754 57999999999999999999999 8888999999998764
Q ss_pred cccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHH
Q 016730 243 KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEA 322 (384)
Q Consensus 243 ~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~ 322 (384)
... .+.||+|++||||+. .++|+.|++.+ |+|| ++|.||+-....+..
T Consensus 126 ~~~-~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~l----k~gG-~l~vt~td~~~l~~~ 173 (378)
T 2dul_A 126 AER-HRYFHFIDLDPFGSP--------------------------MEFLDTALRSA----KRRG-ILGVTATDGAPLCGA 173 (378)
T ss_dssp HHS-TTCEEEEEECCSSCC--------------------------HHHHHHHHHHE----EEEE-EEEEEECCHHHHTTS
T ss_pred Hhc-cCCCCEEEeCCCCCH--------------------------HHHHHHHHHhc----CCCC-EEEEEeecchhhccc
Confidence 433 257999999999752 25788888886 9999 789999866544433
Q ss_pred HHHHHHhcCCCEEeecCCCCCCCCcccc-c-ccccCCCcCCeeEEcCCCCCCCceeEEEEEe
Q 016730 323 VIDYALKKRDVKLVPCGLDFGRQGFVRF-R-EHRFHPSLEKTRRFYPHVHNMDGFFVAKVYL 382 (384)
Q Consensus 323 vv~~~l~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~ 382 (384)
.....+++++.......... ..+.... . ..+ .....++++.|.....+|||++++.|
T Consensus 174 ~~~~~~~~yg~~p~~~~~~~-e~~~ri~l~~~~~--~~~~~g~~i~P~~~~~~~~y~rv~vr 232 (378)
T 2dul_A 174 HPRACLRKYLAVPLRGELCH-EVGTRILVGVIAR--YAAKYDLGIDVILAYYKDHYFRAFVK 232 (378)
T ss_dssp SHHHHHHHHSSBCCCSTTHH-HHHHHHHHHHHHH--HHHTTTEEEEEEEEEEETTEEEEEEE
T ss_pred cHHHHHHHccCCCccccccc-chhHHHHHHHHHH--hcCcCCcEEEEEEEEecCCEEEEEEE
Confidence 44455555543322111000 0000000 0 000 00123478888777778999999976
No 18
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.68 E-value=1.8e-18 Score=163.99 Aligned_cols=204 Identities=14% Similarity=0.136 Sum_probs=125.9
Q ss_pred HHHHcCCCCCeEEEEcCCCCCHHHHH-HHHHHcCCcccCCCccccccEEEecCCCCCCCCcccccceEEEeCCcCcchhh
Q 016730 94 LIESFEKPRPICLRTNTLKTRRRDLA-DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVM 172 (384)
Q Consensus 94 ~~~~~~~~~p~~~RvN~~k~~~~~~~-~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~ 172 (384)
++.++++.+|++.|+|+.+.+.+.+. +.|...++.. .. ......+... .+......+.+..+...+++..+.+++.
T Consensus 28 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGD-EL-IVSGKSFIVS-DFSPMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EEECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTC-EE-EETTEEEEEE-CCCGGGHHHHC-----------------
T ss_pred EEEecCCCCceeccccceeccCCccchhheeCCCCCc-EE-EECCeEEEEe-CCCHHHHHhhccccccccChhhHHHHHH
Confidence 45677888999999996665432211 1121111100 00 0001112211 1222223345556677778877778888
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCcccccCCCCCC
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-g~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.+++++|.+|||+|||+|..+.++++.+.+.+.|+++|+++.+++.+++++++. |..++.+..+|+... +..+.||
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---~~~~~fD 181 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---ISDQMYD 181 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---CCSCCEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---CcCCCcc
Confidence 889999999999999999999999998655579999999999999999999999 988899999998763 2336899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR 331 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~ 331 (384)
+|++|+| +| .++|..+.+.| ||||++++++|+.. ..+.+...++..
T Consensus 182 ~Vi~~~~---------~~------------------~~~l~~~~~~L----kpgG~l~i~~~~~~---~~~~~~~~l~~~ 227 (275)
T 1yb2_A 182 AVIADIP---------DP------------------WNHVQKIASMM----KPGSVATFYLPNFD---QSEKTVLSLSAS 227 (275)
T ss_dssp EEEECCS---------CG------------------GGSHHHHHHTE----EEEEEEEEEESSHH---HHHHHHHHSGGG
T ss_pred EEEEcCc---------CH------------------HHHHHHHHHHc----CCCCEEEEEeCCHH---HHHHHHHHHHHC
Confidence 9999887 11 14678888886 99999999998762 323334445566
Q ss_pred CCEEee
Q 016730 332 DVKLVP 337 (384)
Q Consensus 332 ~~~l~~ 337 (384)
+++.+.
T Consensus 228 Gf~~~~ 233 (275)
T 1yb2_A 228 GMHHLE 233 (275)
T ss_dssp TEEEEE
T ss_pred CCeEEE
Confidence 766554
No 19
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.68 E-value=3.2e-16 Score=143.24 Aligned_cols=170 Identities=15% Similarity=0.143 Sum_probs=119.2
Q ss_pred CCCHHHHHHHHHHcCCcccCC----------CccccccEEEecCCCCCCCCcccccceEEEeCCcCc-chhhhcC--CCC
Q 016730 112 KTRRRDLADVLINRGVNLDPL----------SKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSF-LPVMALA--PQE 178 (384)
Q Consensus 112 k~~~~~~~~~L~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~-l~~~~L~--~~~ 178 (384)
..+++++.+.|.+.|+...+. ..|.+.+ .....+.+..+...++++... ....++. +++
T Consensus 6 ~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~ 77 (226)
T 1i1n_A 6 GASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHE 77 (226)
T ss_dssp CSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCT
T ss_pred CchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCC
Confidence 467889999999999752220 0121111 112223333333445554421 1223343 778
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCcccccCCCCCCEE
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g-----~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
+.+|||+|||+|.++.++++.++..+.|+++|+++.+++.+++++.+.| ..++.+...|+...... .+.||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE--EAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc--CCCcCEE
Confidence 9999999999999999999988655799999999999999999999976 46789999998754322 3689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHH
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAV 323 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~v 323 (384)
+++++|.. ++..+.+.| ||||++++++|+...+++..+
T Consensus 156 ~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~~~~~~~~~~~~ 193 (226)
T 1i1n_A 156 HVGAAAPV----------------------------VPQALIDQL----KPGGRLILPVGPAGGNQMLEQ 193 (226)
T ss_dssp EECSBBSS----------------------------CCHHHHHTE----EEEEEEEEEESCTTSCEEEEE
T ss_pred EECCchHH----------------------------HHHHHHHhc----CCCcEEEEEEecCCCceEEEE
Confidence 99998721 234556665 999999999999877666543
No 20
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.67 E-value=1.4e-17 Score=177.41 Aligned_cols=174 Identities=14% Similarity=0.118 Sum_probs=129.4
Q ss_pred cccccEEEecCCCCCCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHH
Q 016730 135 WSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS 214 (384)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~ 214 (384)
+.+.|+.+. +.-.+.+++|.|..|+....++.... +|.+|||+|||+|+.+++++.. +..+|+++|+|+.
T Consensus 504 v~E~g~~~~-----v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~ 573 (703)
T 3v97_A 504 VTEYNAHLW-----VNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRT 573 (703)
T ss_dssp EEETTEEEE-----ECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHH
T ss_pred EEECCEEEE-----EeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHH
Confidence 345566542 22346788999999998877766543 6899999999999999988873 4467999999999
Q ss_pred HHHHHHHHHHHcCCc--eEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHH
Q 016730 215 RLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLIL 292 (384)
Q Consensus 215 rl~~l~~n~~r~g~~--~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~ 292 (384)
+++.+++|++.+|+. ++.++++|+..+.... .++||+|++||||.+.+-- ..++....+.+.+++.
T Consensus 574 al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii~DPP~f~~~~~-----------~~~~~~~~~~~~~ll~ 641 (703)
T 3v97_A 574 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-NEQFDLIFIDPPTFSNSKR-----------MEDAFDVQRDHLALMK 641 (703)
T ss_dssp HHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC-CCCEEEEEECCCSBC------------------CCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccceEEEecCHHHHHHhc-CCCccEEEECCccccCCcc-----------chhHHHHHHHHHHHHH
Confidence 999999999999997 7999999998753322 3689999999998554310 0111234467788999
Q ss_pred HHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEEeec
Q 016730 293 AAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 293 ~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
.+.++| +|||+|++|+|+-....+++. +++.++++..+
T Consensus 642 ~a~~~L----kpgG~L~~s~~~~~~~~~~~~----l~~~g~~~~~i 679 (703)
T 3v97_A 642 DLKRLL----RAGGTIMFSNNKRGFRMDLDG----LAKLGLKAQEI 679 (703)
T ss_dssp HHHHHE----EEEEEEEEEECCTTCCCCHHH----HHHTTEEEEEC
T ss_pred HHHHhc----CCCcEEEEEECCcccccCHHH----HHHcCCceeee
Confidence 999986 999999999999666666543 34466665544
No 21
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.67 E-value=1.8e-16 Score=145.05 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=119.6
Q ss_pred EeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCC
Q 016730 162 LQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNE 240 (384)
Q Consensus 162 ~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~ 240 (384)
+++..+.+...++...++.+|||+|||+|..|.++++.++..++|+++|+++.+++.+++|+++.|+. ++.++.+|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 34444555566666667889999999999999999998766689999999999999999999999996 49999999866
Q ss_pred cccccC----CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 241 LPKVLG----LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 241 ~~~~~~----~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
...... .++||.|++|+++.. . ....+++..+ ++ |||||+|++.+|..
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~------------------~----~~~~~~~~~~-~~----LkpgG~lv~~~~~~- 173 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDR------------------Y----LPDTLLLEKC-GL----LRKGTVLLADNVIV- 173 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGG------------------H----HHHHHHHHHT-TC----CCTTCEEEESCCCC-
T ss_pred HHHHHHHhcCCCceEEEEEcCCccc------------------c----hHHHHHHHhc-cc----cCCCeEEEEeCCCC-
Confidence 432222 158999999976311 0 1122345544 55 59999999998875
Q ss_pred ccccHHHHHHHHhcCCCEEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEe
Q 016730 317 VTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYL 382 (384)
Q Consensus 317 ~~ENe~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~ 382 (384)
.......+++.++..++...+ ...+|.....|||++++++.
T Consensus 174 -~~~~~~~~~l~~~~~~~~~~~------------------------~~~~~~~~~~dG~~~~~~~g 214 (221)
T 3u81_A 174 -PGTPDFLAYVRGSSSFECTHY------------------------SSYLEYMKVVDGLEKAIYQG 214 (221)
T ss_dssp -CCCHHHHHHHHHCTTEEEEEE------------------------EEEETTTTEEEEEEEEEECC
T ss_pred -cchHHHHHHHhhCCCceEEEc------------------------ccccccCCCCCceEEEEEeC
Confidence 234556666655555443221 12345556789999998863
No 22
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=6.3e-16 Score=144.37 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=96.1
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCc-ccc
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL-PKV 244 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~-~~~ 244 (384)
+.+...++...++.+|||+|||+|..|.++++.+++.+.|+++|+++.+++.+++++++.|+. ++.+..+|+... +..
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 344444555667899999999999999999998875689999999999999999999999997 699999998764 322
Q ss_pred cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 245 ~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
...++||+|++|+++.. ....+..+.++| ||||+|++.++...
T Consensus 132 ~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~L----kpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 GECPAFDLIFIDADKPN-------------------------NPHYLRWALRYS----RPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTC----CTTCEEEEECCSGG
T ss_pred CCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhc----CCCeEEEEeCCCcC
Confidence 22248999999986211 123677778875 99999999887664
No 23
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.63 E-value=1.4e-16 Score=158.50 Aligned_cols=166 Identities=13% Similarity=0.114 Sum_probs=123.3
Q ss_pred CCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-
Q 016730 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT- 229 (384)
Q Consensus 151 ~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~- 229 (384)
...++++|.|..|.....+....+ .+|.+|||+|||+|+.+.+++.. +...|+++|+|+.+++.+++|++.+|+.
T Consensus 187 ~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~ 262 (385)
T 2b78_A 187 LNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDM 262 (385)
T ss_dssp SSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCC
T ss_pred ccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 345677888866666655555544 57899999999999999998874 2358999999999999999999999997
Q ss_pred -eEEEEecCCCCccccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc
Q 016730 230 -NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (384)
Q Consensus 230 -~v~~~~~D~~~~~~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG 306 (384)
++.++++|+.++...+ .+.+||+|++|||+.+.+- .........+.+++..+.++| +|||
T Consensus 263 ~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L----~pgG 325 (385)
T 2b78_A 263 ANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEIL----SENG 325 (385)
T ss_dssp TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTE----EEEE
T ss_pred cceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhc----CCCc
Confidence 8999999987642211 2358999999999864320 011123345677889999986 9999
Q ss_pred EEEEEeccCCc--cccHHHHHHHHhcCCCEEee
Q 016730 307 YIVYSTCSIMV--TENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 307 ~lvYsTCSi~~--~ENe~vv~~~l~~~~~~l~~ 337 (384)
+|++++|+-.. ++..+.+...+.+.+.+++.
T Consensus 326 ~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 358 (385)
T 2b78_A 326 LIIASTNAANMTVSQFKKQIEKGFGKQKHTYLD 358 (385)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEE
Confidence 99999998775 45566777777776666443
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.63 E-value=4e-16 Score=142.36 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=94.7
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCccccc
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~ 245 (384)
+.+...++...++.+|||+|||+|+.+.++++.+++.++|+++|+++.+++.+++++++.|+.+ +.++.+|+......+
T Consensus 47 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 47 GKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344455555678999999999999999999988756899999999999999999999999975 999999987542211
Q ss_pred C---CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 246 G---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 246 ~---~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
. .+.||.|++|++++ ....++..+.++| ||||.+++..+...
T Consensus 127 ~~~~~~~fD~v~~d~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADKQ-------------------------NNPAYFEWALKLS----RPGTVIIGDNVVRE 171 (223)
T ss_dssp HHTTCCCCSEEEECSCGG-------------------------GHHHHHHHHHHTC----CTTCEEEEESCSGG
T ss_pred HhcCCCCcCEEEEcCCcH-------------------------HHHHHHHHHHHhc----CCCcEEEEeCCCcC
Confidence 1 15799999998732 1235677888875 99999998766543
No 25
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.61 E-value=1.3e-14 Score=142.39 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=119.8
Q ss_pred CCcccccceEEEeCCcCcc------hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHH
Q 016730 151 ATPEYMAGFYMLQSASSFL------PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (384)
Q Consensus 151 ~~~~~~~G~~~~Qd~ss~l------~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~ 224 (384)
..+.+..|+-. +..++.- ...++.++++.+|||+|||+|..+..++...++...|+|+|+|+.+++.+++|++
T Consensus 171 g~~l~~r~yr~-~~~a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~ 249 (354)
T 3tma_A 171 ERPLSRRFPKA-ALRGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAAL 249 (354)
T ss_dssp SSCGGGCCGGG-CSSCSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHH
T ss_pred CCccccccccc-CCCCCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHH
Confidence 34455566533 4333321 2233467789999999999999999999887444789999999999999999999
Q ss_pred HcCCceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC
Q 016730 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (384)
Q Consensus 225 r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp 304 (384)
+.|+.++.+.++|+.+++... ..||.|++||||.- ...+...+..++.+++..+.+.| ||
T Consensus 250 ~~g~~~i~~~~~D~~~~~~~~--~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~L----kp 309 (354)
T 3tma_A 250 ASGLSWIRFLRADARHLPRFF--PEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALL----PP 309 (354)
T ss_dssp HTTCTTCEEEECCGGGGGGTC--CCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTS----CT
T ss_pred HcCCCceEEEeCChhhCcccc--CCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhc----CC
Confidence 999988999999999876433 56999999999721 11112345667788999999885 99
Q ss_pred CcEEEEEeccCCccccHHHHHHHHhcCCCEEee
Q 016730 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 305 GG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
||+++++|| |+..++.+++ .+++...
T Consensus 310 gG~l~i~t~------~~~~~~~~~~-~g~~~~~ 335 (354)
T 3tma_A 310 GGRVALLTL------RPALLKRALP-PGFALRH 335 (354)
T ss_dssp TCEEEEEES------CHHHHHHHCC-TTEEEEE
T ss_pred CcEEEEEeC------CHHHHHHHhh-cCcEEEE
Confidence 999999998 4667777777 7766543
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.61 E-value=3e-16 Score=153.23 Aligned_cols=166 Identities=13% Similarity=0.051 Sum_probs=117.8
Q ss_pred CcccccceEEEeCCcCcchhhhcC-CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce
Q 016730 152 TPEYMAGFYMLQSASSFLPVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (384)
Q Consensus 152 ~~~~~~G~~~~Qd~ss~l~~~~L~-~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~ 230 (384)
...+..|.|..|......+...+. ..++.+|||+|||+|+.+..++.. + ..|+++|+|+.+++.+++|++.+|+.+
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 456677888878776655555554 456889999999999999998874 3 389999999999999999999999975
Q ss_pred --EEEEecCCCCccccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc
Q 016730 231 --TIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (384)
Q Consensus 231 --v~~~~~D~~~~~~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG 306 (384)
+.++++|+.++.... ..++||+|++||||.+.+-. .++ + .....+.+++..+.++| ||||
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~---~~~-~--------~~~~~~~~ll~~~~~~L----kpgG 266 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTH---GEV-W--------QLFDHLPLMLDICREIL----SPKA 266 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTT---CCE-E--------EHHHHHHHHHHHHHHTB----CTTC
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCch---HHH-H--------HHHHHHHHHHHHHHHhc----CcCc
Confidence 899999987754221 13689999999998665411 000 1 12334567889999986 9999
Q ss_pred E-EEEEeccCCccc--cHHHHHHHHhcCCCEEe
Q 016730 307 Y-IVYSTCSIMVTE--NEAVIDYALKKRDVKLV 336 (384)
Q Consensus 307 ~-lvYsTCSi~~~E--Ne~vv~~~l~~~~~~l~ 336 (384)
. ++.++|+....+ -++.+...+++.+.++.
T Consensus 267 ~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 267 LGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 9 556667765322 23344444445565554
No 27
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.60 E-value=7.7e-17 Score=160.46 Aligned_cols=173 Identities=12% Similarity=0.095 Sum_probs=118.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce--EEEEecCCCCccc-ccCCCCCCEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN--TIVCNYDGNELPK-VLGLNTVDRV 253 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~--v~~~~~D~~~~~~-~~~~~~fD~V 253 (384)
++|++|||+|||+|++++.++..+++.+.|+++|+++.+++.+++|++++|+++ +.++++|+..+.. .. .+.||+|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-~~~fD~V 129 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-GFGFDYV 129 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-SSCEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-CCCCcEE
Confidence 578999999999999999999987555789999999999999999999999987 9999999877643 33 2579999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~ 333 (384)
++||+|+. ..++..|+++| ++|| ++|+||+-........+...+++++.
T Consensus 130 ~lDP~g~~--------------------------~~~l~~a~~~L----k~gG-ll~~t~t~~~~l~g~~~~~~~rkYg~ 178 (392)
T 3axs_A 130 DLDPFGTP--------------------------VPFIESVALSM----KRGG-ILSLTATDTAPLSGTYPKTCMRRYMA 178 (392)
T ss_dssp EECCSSCC--------------------------HHHHHHHHHHE----EEEE-EEEEEECCHHHHTTSSHHHHHHHHSS
T ss_pred EECCCcCH--------------------------HHHHHHHHHHh----CCCC-EEEEEecchhhhccccHHHHHHHhCC
Confidence 99997531 23778888876 9999 78999976553332234445555654
Q ss_pred EEeecCCCCCCCCcccccccccCCCcCCeeEEcCCCCCCCceeEEEEEe
Q 016730 334 KLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKVYL 382 (384)
Q Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~~ 382 (384)
+........ ..+....-..-.-.....++.+.|...-..|||+-++.|
T Consensus 179 ~p~r~~~~~-e~~~r~~L~~~~~~a~~~~~~i~P~l~~~~~~y~Rv~vr 226 (392)
T 3axs_A 179 RPLRNEFKH-EVGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFV 226 (392)
T ss_dssp BCCCSTTHH-HHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEE
T ss_pred ccccccccc-chhHHHHHHHHHHhcccCCCeEEeeEEEEeCcEEEEEEE
Confidence 433221100 000000000000000123477788766678899888765
No 28
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=4.9e-15 Score=140.82 Aligned_cols=127 Identities=25% Similarity=0.278 Sum_probs=103.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
.++|++|||+|||+|+.+..++.... ..|+|+|+|+.+++.+++|++.+|+.+ +.++++|+..+.. .+.||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---cCCccEEE
Confidence 45799999999999999999998743 279999999999999999999999986 8899999998764 37899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC---CccccHHHHHHHHhcC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI---MVTENEAVIDYALKKR 331 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi---~~~ENe~vv~~~l~~~ 331 (384)
+|+|++. .+++..+.+.| ||||++++++|+- ..++..+.+...+++.
T Consensus 198 ~~~p~~~--------------------------~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 198 MGYVVRT--------------------------HEFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSG--------------------------GGGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCchhH--------------------------HHHHHHHHHHC----CCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9999422 23567788876 9999999999984 2345556667777777
Q ss_pred CCEEee
Q 016730 332 DVKLVP 337 (384)
Q Consensus 332 ~~~l~~ 337 (384)
++++..
T Consensus 248 G~~~~~ 253 (278)
T 2frn_A 248 GYDVEK 253 (278)
T ss_dssp TCEEEE
T ss_pred CCeeEE
Confidence 766543
No 29
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.60 E-value=9.9e-15 Score=132.32 Aligned_cols=132 Identities=19% Similarity=0.240 Sum_probs=106.2
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~ 247 (384)
++...+.+.++++|||+|||+|..+..++.. .+.|+++|+++.+++.+++|++++|+. ++.++.+|+.......
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-- 120 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-- 120 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS--
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC--
Confidence 3445567889999999999999999999887 478999999999999999999999998 8999999998743222
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHH
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~ 327 (384)
..||.|++++.. . +. ++..+.+.| ||||++++++|+. ++...+...
T Consensus 121 ~~~D~v~~~~~~----------------~----------~~-~l~~~~~~L----kpgG~lv~~~~~~---~~~~~~~~~ 166 (204)
T 3njr_A 121 PLPEAVFIGGGG----------------S----------QA-LYDRLWEWL----APGTRIVANAVTL---ESETLLTQL 166 (204)
T ss_dssp CCCSEEEECSCC----------------C----------HH-HHHHHHHHS----CTTCEEEEEECSH---HHHHHHHHH
T ss_pred CCCCEEEECCcc----------------c----------HH-HHHHHHHhc----CCCcEEEEEecCc---ccHHHHHHH
Confidence 579999987621 0 23 677788875 9999999999875 666677777
Q ss_pred HhcCCCEEeecC
Q 016730 328 LKKRDVKLVPCG 339 (384)
Q Consensus 328 l~~~~~~l~~~~ 339 (384)
+++.++++..+.
T Consensus 167 l~~~g~~i~~i~ 178 (204)
T 3njr_A 167 HARHGGQLLRID 178 (204)
T ss_dssp HHHHCSEEEEEE
T ss_pred HHhCCCcEEEEE
Confidence 777777776653
No 30
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.59 E-value=5e-16 Score=148.34 Aligned_cols=221 Identities=16% Similarity=0.182 Sum_probs=138.1
Q ss_pred HHHHHHHHhC--CHHHHHHHHHHcCCCCCeEEEEcC--C-CCCHHHHHHHHHHc--CCcccCCC---ccccccEEEecCC
Q 016730 77 FLIGALVEMF--PPVELMELIESFEKPRPICLRTNT--L-KTRRRDLADVLINR--GVNLDPLS---KWSKVGLVVYDSQ 146 (384)
Q Consensus 77 wl~~~l~~~~--~~~~~~~~~~~~~~~~p~~~RvN~--~-k~~~~~~~~~L~~~--g~~~~~~~---~~~~~~~~~~~~~ 146 (384)
|..++|.+.+ +..+++.++.......+.+++.|. . ..+.+.+.+.+... |..+.-+. .+ .++.+.-
T Consensus 22 ~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~yi~g~~~f--~~~~~~v-- 97 (284)
T 1nv8_A 22 DCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEF--MGLSFLV-- 97 (284)
T ss_dssp HHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHHHHHTEEEE--TTEEEEC--
T ss_pred HHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCeEEeeeeEE--CCeEEEe--
Confidence 5555555444 456677888888887888888876 2 22334555555443 32211100 01 1111110
Q ss_pred CCCCCCcccccceEEEeCCcCcchhhhc---CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHH
Q 016730 147 VPIGATPEYMAGFYMLQSASSFLPVMAL---APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL 223 (384)
Q Consensus 147 ~~~~~~~~~~~G~~~~Qd~ss~l~~~~L---~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~ 223 (384)
..|.++.......++..++ ...++.+|||+|||+|..+..++.. + ...|+|+|+|+.+++.+++|+
T Consensus 98 ---------~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 98 ---------EEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp ---------CTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHH
T ss_pred ---------CCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHH
Confidence 1122322333333333332 2346789999999999999999988 4 479999999999999999999
Q ss_pred HHcCCce-EEEEecCCCCcccccCCCCC---CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH-Hch
Q 016730 224 HRMGVTN-TIVCNYDGNELPKVLGLNTV---DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMV 298 (384)
Q Consensus 224 ~r~g~~~-v~~~~~D~~~~~~~~~~~~f---D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~-~~L 298 (384)
+++|+.+ +.++++|+..... ++| |.|++||||.+.+. ...++++ ......+. .......+++.++ +.+
T Consensus 167 ~~~~l~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~-~l~~~v~-~ep~~al~-~~~dgl~~~~~i~~~~l 239 (284)
T 1nv8_A 167 ERHGVSDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSA-HLPKDVL-FEPPEALF-GGEDGLDFYREFFGRYD 239 (284)
T ss_dssp HHTTCTTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGG-SCTTSCC-CSCHHHHB-CTTTSCHHHHHHHHHCC
T ss_pred HHcCCCCceEEEECcchhhcc----cccCCCCEEEEcCCCCCccc-ccChhhc-cCcHHHhc-CCCcHHHHHHHHHHhcC
Confidence 9999986 9999999987422 367 99999999998876 4455554 21111100 0001124677777 775
Q ss_pred hccCCCCcEEEEEeccCCccccHHHHHH
Q 016730 299 DANSKSGGYIVYSTCSIMVTENEAVIDY 326 (384)
Q Consensus 299 ~~~lkpGG~lvYsTCSi~~~ENe~vv~~ 326 (384)
+|||.+++ .+...+++++.+.
T Consensus 240 ----~pgG~l~~---e~~~~q~~~v~~~ 260 (284)
T 1nv8_A 240 ----TSGKIVLM---EIGEDQVEELKKI 260 (284)
T ss_dssp ----CTTCEEEE---ECCTTCHHHHTTT
T ss_pred ----CCCCEEEE---EECchHHHHHHHH
Confidence 99999986 3455566655543
No 31
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=1.5e-15 Score=139.73 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=102.9
Q ss_pred ceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEec
Q 016730 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNY 236 (384)
Q Consensus 158 G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~ 236 (384)
|..++|...+.+...++.+.++.+|||+|||+|..+..+++.++ .+.|+++|+++.+++.+++++++.|+. ++.+..+
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 34456666666777777777899999999999999999999876 479999999999999999999999985 5999999
Q ss_pred CCCCccccc-CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 237 DGNELPKVL-GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 237 D~~~~~~~~-~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+....... ..+.||+|++|+||+ .+.+++..+.++| ||||+++++++..
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMV----RPGGLILSDNVLF 163 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGE----EEEEEEEEETTTC
T ss_pred CHHHHHHhcccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEEcCCc
Confidence 987752222 136899999999853 1345788888886 9999999986543
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.57 E-value=1.8e-14 Score=129.68 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=109.5
Q ss_pred ceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 016730 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (384)
Q Consensus 158 G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D 237 (384)
|.+ .++.........+.++++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++|+++.|+.++.++.+|
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444 3333334455667888999999999999999999998854 47999999999999999999999999889999999
Q ss_pred CCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 238 ~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
+....... ..||.|+++.+.. ...+++..+.+.| ||||++++++++.
T Consensus 99 ~~~~~~~~--~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~L----kpgG~l~~~~~~~-- 145 (204)
T 3e05_A 99 APEGLDDL--PDPDRVFIGGSGG-------------------------MLEEIIDAVDRRL----KSEGVIVLNAVTL-- 145 (204)
T ss_dssp TTTTCTTS--CCCSEEEESCCTT-------------------------CHHHHHHHHHHHC----CTTCEEEEEECBH--
T ss_pred hhhhhhcC--CCCCEEEECCCCc-------------------------CHHHHHHHHHHhc----CCCeEEEEEeccc--
Confidence 86653322 6799999987631 1235788888875 9999999988765
Q ss_pred cccHHHHHHHHhcCCC
Q 016730 318 TENEAVIDYALKKRDV 333 (384)
Q Consensus 318 ~ENe~vv~~~l~~~~~ 333 (384)
++.+.+...+++.++
T Consensus 146 -~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 146 -DTLTKAVEFLEDHGY 160 (204)
T ss_dssp -HHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHCCC
Confidence 566666677777775
No 33
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.57 E-value=1.3e-14 Score=134.59 Aligned_cols=124 Identities=19% Similarity=0.233 Sum_probs=95.6
Q ss_pred eEEEeCCc-Ccchhhh------cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceE
Q 016730 159 FYMLQSAS-SFLPVMA------LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (384)
Q Consensus 159 ~~~~Qd~s-s~l~~~~------L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v 231 (384)
.|-+=|+- |.|++.+ |.++||++|||+|||+|..+.++|..+++.|+|+|+|+++.+++.+++++++. .|+
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni 128 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNI 128 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTE
T ss_pred eeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCe
Confidence 34444443 4555554 45899999999999999999999999998999999999999999999888764 478
Q ss_pred EEEecCCCCcccc-cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE
Q 016730 232 IVCNYDGNELPKV-LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (384)
Q Consensus 232 ~~~~~D~~~~~~~-~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY 310 (384)
..+..|+..+... .....||.|++|.+.. + .....+.++.+.| ||||+++.
T Consensus 129 ~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~---------~---------------~~~~~l~~~~r~L----KpGG~lvI 180 (233)
T 4df3_A 129 FPILGDARFPEKYRHLVEGVDGLYADVAQP---------E---------------QAAIVVRNARFFL----RDGGYMLM 180 (233)
T ss_dssp EEEESCTTCGGGGTTTCCCEEEEEECCCCT---------T---------------HHHHHHHHHHHHE----EEEEEEEE
T ss_pred eEEEEeccCccccccccceEEEEEEeccCC---------h---------------hHHHHHHHHHHhc----cCCCEEEE
Confidence 8888888875332 2236899999998731 1 1234678888886 99999987
Q ss_pred Ee
Q 016730 311 ST 312 (384)
Q Consensus 311 sT 312 (384)
+.
T Consensus 181 ~i 182 (233)
T 4df3_A 181 AI 182 (233)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 34
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.57 E-value=1.3e-14 Score=128.30 Aligned_cols=131 Identities=17% Similarity=0.274 Sum_probs=93.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+++|++|||+|||+|..|..+++. .+.|+|+|+|+.+++.++++++..|+.++.+++.|...+.... .++||.|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~-~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV-REPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC-CSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc-cCCcCEEEE
Confidence 568999999999999999999886 4799999999999999999999999988999887776654333 478999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc---cccHHHHHHH
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV---TENEAVIDYA 327 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~---~ENe~vv~~~ 327 (384)
++++ +.. ....+......+.+.|..+.+.| ||||+++.+.++-++ +|.+.+.+++
T Consensus 96 ~~~~-----~~~--------~~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~ 153 (185)
T 3mti_A 96 NLGY-----LPS--------ADKSVITKPHTTLEAIEKILDRL----EVGGRLAIMIYYGHDGGDMEKDAVLEYV 153 (185)
T ss_dssp EEC------------------------CHHHHHHHHHHHHHHE----EEEEEEEEEEC------CHHHHHHHHHH
T ss_pred eCCC-----CCC--------cchhcccChhhHHHHHHHHHHhc----CCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 8642 110 11112222344566788888886 999999988876554 3445444444
No 35
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=3e-14 Score=130.28 Aligned_cols=150 Identities=13% Similarity=0.082 Sum_probs=103.9
Q ss_pred CCCCceEEEeccC-CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAA-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cag-pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+++|.+|||+||| +|..+..++... .+.|+|+|+++.+++.+++|+..+|+ ++.++.+|+..+.... .+.||+|+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~~fD~I~ 128 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVV-EGTFDVIF 128 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTC-CSCEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcc-cCceeEEE
Confidence 4689999999999 999999999876 37899999999999999999999999 8899999976543322 37899999
Q ss_pred EcCCCCCCCcCCCC-chhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCC
Q 016730 255 LDAPCSGTGVISKD-ESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (384)
Q Consensus 255 lDaPCSg~G~~~r~-p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~ 333 (384)
+|||+...+.-... |...+....... ....+++..+.++| ||||++++.+++- .++.+.+...+++.++
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L----kpgG~l~~~~~~~--~~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGE----EFSVKLLEEAFDHL----NPGGKVALYLPDK--EKLLNVIKERGIKLGY 198 (230)
T ss_dssp ECCCCC---------------CCSSSC----HHHHHHHHHHGGGE----EEEEEEEEEEESC--HHHHHHHHHHHHHTTC
T ss_pred ECCCCcCCccccccChhhhhccCccch----HHHHHHHHHHHHHh----CCCeEEEEEeccc--HhHHHHHHHHHHHcCC
Confidence 99998665532211 111111100111 12256888888886 9999999876542 2444555566777787
Q ss_pred EEeecC
Q 016730 334 KLVPCG 339 (384)
Q Consensus 334 ~l~~~~ 339 (384)
++..+.
T Consensus 199 ~~~~~~ 204 (230)
T 3evz_A 199 SVKDIK 204 (230)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 766553
No 36
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.55 E-value=2.7e-14 Score=135.89 Aligned_cols=125 Identities=26% Similarity=0.316 Sum_probs=99.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
.++|++|||+|||+|+.|+.+|.. +..+|+|+|+|+..++.+++|++++|+.+ +.++++|++.+.. ...||+|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~---~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc---ccCCCEEE
Confidence 468999999999999999998876 33689999999999999999999999976 8999999998764 26899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE-Eec--cCCccccHHHHHHHHhcC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STC--SIMVTENEAVIDYALKKR 331 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY-sTC--Si~~~ENe~vv~~~l~~~ 331 (384)
+|+|+++. +.|..|+++| |+||.|.| ..+ ....++-.+.++.+.+..
T Consensus 198 ~~~p~~~~--------------------------~~l~~a~~~l----k~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 198 MGYVVRTH--------------------------EFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSGG--------------------------GGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCCCcHH--------------------------HHHHHHHHHc----CCCCEEEEEeeecccccchhHHHHHHHHHHHc
Confidence 99996432 2567788876 99999864 332 233344556777777777
Q ss_pred CCEE
Q 016730 332 DVKL 335 (384)
Q Consensus 332 ~~~l 335 (384)
++++
T Consensus 248 g~~v 251 (278)
T 3k6r_A 248 GYDV 251 (278)
T ss_dssp TCEE
T ss_pred CCcE
Confidence 6554
No 37
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.54 E-value=5.5e-14 Score=139.03 Aligned_cols=154 Identities=12% Similarity=0.118 Sum_probs=112.8
Q ss_pred CcccccceEEEeCCcCcchhhhc-CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce
Q 016730 152 TPEYMAGFYMLQSASSFLPVMAL-APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (384)
Q Consensus 152 ~~~~~~G~~~~Qd~ss~l~~~~L-~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~ 230 (384)
...|..++...|+..+.+..... ...+|.+|||+| |+|..+..++... ..+.|+++|+|+.+++.+++|++++|+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~~ 222 (373)
T 2qm3_A 145 LHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYED 222 (373)
T ss_dssp CGGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCCC
T ss_pred chhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 34566666666665555443322 234689999999 9999998887753 33699999999999999999999999988
Q ss_pred EEEEecCCCC-cccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcE-E
Q 016730 231 TIVCNYDGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGY-I 308 (384)
Q Consensus 231 v~~~~~D~~~-~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~-l 308 (384)
+.++.+|+.. ++... .+.||+|++||||+.. . ...+|..+.+.| ||||+ +
T Consensus 223 v~~~~~D~~~~l~~~~-~~~fD~Vi~~~p~~~~----------------~-------~~~~l~~~~~~L----kpgG~~~ 274 (373)
T 2qm3_A 223 IEIFTFDLRKPLPDYA-LHKFDTFITDPPETLE----------------A-------IRAFVGRGIATL----KGPRCAG 274 (373)
T ss_dssp EEEECCCTTSCCCTTT-SSCBSEEEECCCSSHH----------------H-------HHHHHHHHHHTB----CSTTCEE
T ss_pred EEEEEChhhhhchhhc-cCCccEEEECCCCchH----------------H-------HHHHHHHHHHHc----ccCCeEE
Confidence 9999999988 54312 2589999999997421 1 166889999986 99995 5
Q ss_pred EEEeccCCccccH---HHHHHHHh-cCCCEEee
Q 016730 309 VYSTCSIMVTENE---AVIDYALK-KRDVKLVP 337 (384)
Q Consensus 309 vYsTCSi~~~ENe---~vv~~~l~-~~~~~l~~ 337 (384)
+|++|+ ..++. ..+..++. ..++++..
T Consensus 275 ~~~~~~--~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 275 YFGITR--RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp EEEECT--TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEEec--CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 888886 23444 55666666 66665543
No 38
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.53 E-value=2.1e-15 Score=140.62 Aligned_cols=127 Identities=11% Similarity=0.115 Sum_probs=99.0
Q ss_pred EEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCC
Q 016730 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDG 238 (384)
Q Consensus 160 ~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~ 238 (384)
+.++...+.+...++...++.+|||+|||+|..|.++++.++..+.|+++|+++.+++.+++++++.|+. ++.++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 3344555556666666667889999999999999999998876689999999999999999999999996 799999998
Q ss_pred CCccccc----CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 239 NELPKVL----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 239 ~~~~~~~----~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
....... ..++||.|++|++.. .....+..+.++| ||||+|++..+.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~~~ 172 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKT-------------------------NYLNYYELALKLV----TPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECSS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChH-------------------------HhHHHHHHHHHhc----CCCeEEEEECCc
Confidence 7653221 026899999998610 0123677778876 999999987655
Q ss_pred C
Q 016730 315 I 315 (384)
Q Consensus 315 i 315 (384)
.
T Consensus 173 ~ 173 (242)
T 3r3h_A 173 W 173 (242)
T ss_dssp S
T ss_pred c
Confidence 3
No 39
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=6.1e-14 Score=125.17 Aligned_cols=125 Identities=16% Similarity=0.243 Sum_probs=97.1
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+++|.+|||+|||+|..+..++...++.+.|+++|+++.+++.++++++..|+ .++.++++|+..++... .++||.|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~fD~v 97 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI-DCPVKAV 97 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-CSCEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-cCCceEE
Confidence 467899999999999999999999886567999999999999999999999998 67999999988776433 3789999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++|+|.-.. .+........ ...+++..+.++| ||||++++++++-++
T Consensus 98 ~~~~~~~~~------~~~~~~~~~~-------~~~~~l~~~~~~L----k~gG~l~~~~~~~~~ 144 (197)
T 3eey_A 98 MFNLGYLPS------GDHSISTRPE-------TTIQALSKAMELL----VTGGIITVVIYYGGD 144 (197)
T ss_dssp EEEESBCTT------SCTTCBCCHH-------HHHHHHHHHHHHE----EEEEEEEEEECCBTT
T ss_pred EEcCCcccC------cccccccCcc-------cHHHHHHHHHHhC----cCCCEEEEEEccCCC
Confidence 999875110 1111111222 2345788888886 999999988765443
No 40
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.52 E-value=1.9e-14 Score=133.44 Aligned_cols=122 Identities=16% Similarity=0.133 Sum_probs=96.3
Q ss_pred CcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCccc
Q 016730 165 ASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPK 243 (384)
Q Consensus 165 ~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~ 243 (384)
....+...++...++.+|||+|||+|+.+.++++.+++.++|+++|+++.+++.+++++++.|+. ++.++.+|+.+...
T Consensus 57 ~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 136 (237)
T 3c3y_A 57 LAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALD 136 (237)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 33344444455556789999999999999999999876689999999999999999999999996 48999999876422
Q ss_pred cc-----CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 244 VL-----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 244 ~~-----~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.+ ..+.||.|++|++++ .+..+++.+.++| ||||+|++.+|..
T Consensus 137 ~l~~~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L----~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 137 NLLQGQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLV----KVGGIVAYDNTLW 184 (237)
T ss_dssp HHHHSTTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECTTG
T ss_pred HHHhccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhc----CCCeEEEEecCCc
Confidence 12 136899999997631 1245777888876 9999999998754
No 41
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1.8e-13 Score=128.59 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=97.1
Q ss_pred cCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHH---cCCc-eEEEEecCCCCc
Q 016730 166 SSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR---MGVT-NTIVCNYDGNEL 241 (384)
Q Consensus 166 ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r---~g~~-~v~~~~~D~~~~ 241 (384)
.+.+.+.++...++.+|||+|||+|..+..+++..+ ...|+++|+++.+++.+++|+.. +|+. ++.++++|+..+
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 456667777778899999999999999999999875 37999999999999999999998 8886 499999999887
Q ss_pred cc-----ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 242 PK-----VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 242 ~~-----~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.. .+..++||.|++|||+...+ -...|+....... .........++..+.++| ||||+++...
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~---~~~~~~~~~~l~~~~~~L----kpgG~l~~~~ 170 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEAH---AMTEGLFEDWIRTASAIM----VSGGQLSLIS 170 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHHh---hcCcCCHHHHHHHHHHHc----CCCCEEEEEE
Confidence 21 12347899999999987653 1222222111000 000112456788888886 9999998754
No 42
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.49 E-value=4.8e-15 Score=133.03 Aligned_cols=151 Identities=15% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--cCCCCCCEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNTVDRVL 254 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--~~~~~fD~Vl 254 (384)
.++.+|||+|||+|..+.+++...+ ...|+++|+++.+++.+++|+...|. ++.++++|+...... ...++||.|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 6789999999999999999999864 36999999999999999999999888 788888888763211 0126899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHH-H---HHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHh-
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLED-I---QKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK- 329 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~-i---~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~- 329 (384)
+|||+...+.+..-+.......+.. + ........+++..+.++ |||||++++.++.. ...+.+..+++
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----LkpgG~l~~~~~~~---~~~~~~~~~l~~ 179 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV----LARGRAGVFLEVGH---NQADEVARLFAP 179 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGG----BCSSSEEEEEECTT---SCHHHHHHHTGG
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH----hcCCCeEEEEEECC---ccHHHHHHHHHH
Confidence 9999977765533211100000000 0 00011224566666666 49999966665543 44555566666
Q ss_pred -cCCCEEe
Q 016730 330 -KRDVKLV 336 (384)
Q Consensus 330 -~~~~~l~ 336 (384)
..++..+
T Consensus 180 ~~~gf~~~ 187 (215)
T 4dzr_A 180 WRERGFRV 187 (215)
T ss_dssp GGGGTEEC
T ss_pred hhcCCceE
Confidence 5565443
No 43
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.49 E-value=2.6e-13 Score=120.62 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=89.3
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.+|.+|||+|||+|..+..+++. +...|+|+|+|+.+++.+++|++.+|+.++.++++|+..+......++||.|++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEEC
Confidence 57899999999999999877764 3468999999999999999999999998899999999876543334789999999
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHH--chhccCCCCcEEEEEeccCC
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID--MVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~--~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|.... .. ...+++..+.+ + |||||+++..+.+-.
T Consensus 121 ~p~~~~--------------~~-------~~~~~l~~~~~~~~----L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 121 PPYNVD--------------SA-------DVDAILAALGTNGW----TREGTVAVVERATTC 157 (189)
T ss_dssp CCTTSC--------------HH-------HHHHHHHHHHHSSS----CCTTCEEEEEEETTS
T ss_pred CCCCcc--------------hh-------hHHHHHHHHHhcCc----cCCCeEEEEEecCCC
Confidence 994221 11 22445666666 5 499999999876543
No 44
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.47 E-value=1.1e-13 Score=136.64 Aligned_cols=102 Identities=17% Similarity=0.276 Sum_probs=83.4
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCC-----------
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL----------- 247 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~----------- 247 (384)
|.+|||+|||+|+.|+.+|.. ...|+|+|+++.+++.+++|++.+|++|+.++.+|+.++...+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 678999999999999988763 358999999999999999999999999999999998765322211
Q ss_pred ---CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 248 ---NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 248 ---~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
..||+|++|||+.|.. ..+++.| +++|++||++|+-
T Consensus 291 ~~~~~fD~Vv~dPPr~g~~----------------------------~~~~~~l----~~~g~ivyvsc~p 329 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRSGLD----------------------------SETEKMV----QAYPRILYISCNP 329 (369)
T ss_dssp GGGCCEEEEEECCCTTCCC----------------------------HHHHHHH----TTSSEEEEEESCH
T ss_pred cccCCCCEEEECcCccccH----------------------------HHHHHHH----hCCCEEEEEECCH
Confidence 2799999999976431 2345555 7999999999964
No 45
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=8.3e-13 Score=119.80 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=101.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..++...+ ...|+|+|+++.+++.+++|+.+.|+.++.++.+|+..++..+..+.||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 4688999999999999999999875 379999999999999999999999999999999999886644445789999999
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEEe
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLV 336 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~ 336 (384)
.|. |..+. ...... -.+..++..+.++| ||||.++++|-. ..--+.+...++..+++++
T Consensus 119 ~~~---------~~~~~---~~~~~~--~~~~~~l~~~~~~L----kpgG~l~~~~~~---~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 119 FSD---------PWPKK---RHEKRR--LTYKTFLDTFKRIL----PENGEIHFKTDN---RGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp SCC---------CCCSG---GGGGGS--TTSHHHHHHHHHHS----CTTCEEEEEESC---HHHHHHHHHHHHHHTCEEE
T ss_pred CCC---------Ccccc---chhhhc--cCCHHHHHHHHHHc----CCCcEEEEEeCC---HHHHHHHHHHHHHCCCeee
Confidence 772 11110 000000 02456788888875 999999887631 1111223334445577766
Q ss_pred ec
Q 016730 337 PC 338 (384)
Q Consensus 337 ~~ 338 (384)
..
T Consensus 178 ~~ 179 (214)
T 1yzh_A 178 GV 179 (214)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 46
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=8.7e-14 Score=131.79 Aligned_cols=109 Identities=23% Similarity=0.284 Sum_probs=89.8
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
..+.+|++|||+|||+|..+..++...+ .+.|+|+|+++.+++.+++|++.+|+.++.++++|+..+ .. .+.||+|
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--TTCEEEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--cCCceEE
Confidence 3467899999999999999999999864 469999999999999999999999999999999999887 32 3689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++|+|. + ..+++..+.+.| ||||+++ .+|....
T Consensus 191 i~d~p~---~-----------------------~~~~l~~~~~~L----kpgG~l~-~s~~~~~ 223 (272)
T 3a27_A 191 IMGYVH---K-----------------------THKFLDKTFEFL----KDRGVIH-YHETVAE 223 (272)
T ss_dssp EECCCS---S-----------------------GGGGHHHHHHHE----EEEEEEE-EEEEEEG
T ss_pred EECCcc---c-----------------------HHHHHHHHHHHc----CCCCEEE-EEEcCcc
Confidence 999994 1 123567777775 9999876 5565543
No 47
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.46 E-value=1.1e-13 Score=124.44 Aligned_cols=123 Identities=17% Similarity=0.251 Sum_probs=91.1
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc------cC---
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG--- 246 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~------~~--- 246 (384)
+++|.+|||+|||||++|.++++. .+.|+|+|+++.. .+.++.++.+|+...... +.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 468999999999999999999887 4799999999742 346788999999875321 11
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHH
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~ 326 (384)
.++||+|++|+|+..+|.. ..+......++..+|..|.++| ||||+++.. ++..++...+..
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~-----------~~d~~~~~~l~~~~l~~a~~~L----kpGG~lv~k---~~~~~~~~~~~~ 150 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIP-----------SRDHAVSYQIGQRVMEIAVRYL----RNGGNVLLK---QFQGDMTNDFIA 150 (191)
T ss_dssp CSSEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEE---EECSTHHHHHHH
T ss_pred CCcceEEecCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHc----cCCCEEEEE---EcCCCCHHHHHH
Confidence 1389999999998877752 1222334466778888888886 999999854 455566666666
Q ss_pred HHhc
Q 016730 327 ALKK 330 (384)
Q Consensus 327 ~l~~ 330 (384)
.++.
T Consensus 151 ~l~~ 154 (191)
T 3dou_A 151 IWRK 154 (191)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 6654
No 48
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.45 E-value=9e-14 Score=133.42 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=96.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--C--CceEEEEecCCCCcccccCCCCCCE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G--VTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g--~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
..+.+|||+|||+|+.+..+++..+ .++|+++|+|+..++.+++++..+ + ..++.++.+|+..+.... .++||+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCceE
Confidence 3458999999999999998887643 479999999999999999998662 2 357899999987643222 368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc--CCccccHHHHHHHHhc
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS--IMVTENEAVIDYALKK 330 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS--i~~~ENe~vv~~~l~~ 330 (384)
|++|+|+...|.. . .-.+.+++..+.+.| ||||.+++.+|| +..++...+++.+.+.
T Consensus 167 Ii~d~~~~~~~~~-----~------------~l~~~~~l~~~~~~L----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 225 (296)
T 1inl_A 167 IIIDSTDPTAGQG-----G------------HLFTEEFYQACYDAL----KEDGVFSAETEDPFYDIGWFKLAYRRISKV 225 (296)
T ss_dssp EEEEC---------------------------CCSHHHHHHHHHHE----EEEEEEEEECCCTTTTHHHHHHHHHHHHHH
T ss_pred EEEcCCCcccCch-----h------------hhhHHHHHHHHHHhc----CCCcEEEEEccCcccCHHHHHHHHHHHHHH
Confidence 9999986423210 0 002356778888876 999999999998 4567777787777666
Q ss_pred C
Q 016730 331 R 331 (384)
Q Consensus 331 ~ 331 (384)
+
T Consensus 226 F 226 (296)
T 1inl_A 226 F 226 (296)
T ss_dssp C
T ss_pred C
Confidence 4
No 49
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=1e-13 Score=128.87 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=99.4
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGL 247 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~ 247 (384)
.....+++.+|.+|||+|||+|..+.+++..+.+.+.|+++|+++.+++.++++++..|+.+ +.+...|+... +..
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~ 160 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---IEE 160 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---CCC
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---cCC
Confidence 44556678899999999999999999999987666899999999999999999999999987 99999998754 234
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHH
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~ 327 (384)
+.||.|++|+|+. .+++.++.+.| ||||+++..+-+. +....+...
T Consensus 161 ~~~D~v~~~~~~~---------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~ 206 (255)
T 3mb5_A 161 ENVDHVILDLPQP---------------------------ERVVEHAAKAL----KPGGFFVAYTPCS---NQVMRLHEK 206 (255)
T ss_dssp CSEEEEEECSSCG---------------------------GGGHHHHHHHE----EEEEEEEEEESSH---HHHHHHHHH
T ss_pred CCcCEEEECCCCH---------------------------HHHHHHHHHHc----CCCCEEEEEECCH---HHHHHHHHH
Confidence 6799999998831 23577788876 9999998654322 233333445
Q ss_pred HhcCC
Q 016730 328 LKKRD 332 (384)
Q Consensus 328 l~~~~ 332 (384)
+++.+
T Consensus 207 l~~~g 211 (255)
T 3mb5_A 207 LREFK 211 (255)
T ss_dssp HHHTG
T ss_pred HHHcC
Confidence 55554
No 50
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.45 E-value=1.1e-12 Score=114.41 Aligned_cols=133 Identities=16% Similarity=0.178 Sum_probs=101.6
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~ 248 (384)
....+.+.++.+|||+|||+|..+.+++...+ .+.|+++|+++.+++.+++++..+|+. ++ ++..|+...... ..+
T Consensus 17 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~-~~~ 93 (178)
T 3hm2_A 17 AISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD-VPD 93 (178)
T ss_dssp HHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG-CCS
T ss_pred HHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc-cCC
Confidence 34556788999999999999999999888764 479999999999999999999999997 78 778887542211 126
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHH
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l 328 (384)
.||.|+++.+... .+++..+.+.| ||||++++++++. ++...+..++
T Consensus 94 ~~D~i~~~~~~~~--------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~~ 140 (178)
T 3hm2_A 94 NPDVIFIGGGLTA--------------------------PGVFAAAWKRL----PVGGRLVANAVTV---ESEQMLWALR 140 (178)
T ss_dssp CCSEEEECC-TTC--------------------------TTHHHHHHHTC----CTTCEEEEEECSH---HHHHHHHHHH
T ss_pred CCCEEEECCcccH--------------------------HHHHHHHHHhc----CCCCEEEEEeecc---ccHHHHHHHH
Confidence 8999998665210 34677888875 9999999988765 5556666666
Q ss_pred hcCCCEEeec
Q 016730 329 KKRDVKLVPC 338 (384)
Q Consensus 329 ~~~~~~l~~~ 338 (384)
++.+.++..+
T Consensus 141 ~~~~~~~~~~ 150 (178)
T 3hm2_A 141 KQFGGTISSF 150 (178)
T ss_dssp HHHCCEEEEE
T ss_pred HHcCCeeEEE
Confidence 6666666543
No 51
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=3.8e-13 Score=127.09 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=102.6
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~ 248 (384)
.+..+++.+|.+|||+|||+|..+..++..+.+.+.|+++|+++.+++.+++|++++|+ .++.+...|+... +..+
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~ 180 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEK 180 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCC
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCC
Confidence 34556788999999999999999999999866568999999999999999999999998 6799999998765 2236
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHH
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l 328 (384)
.||+|++|+|+. .+++..+.+.| +|||++++.+++. +....+...+
T Consensus 181 ~~D~V~~~~~~~---------------------------~~~l~~~~~~L----~pgG~l~~~~~~~---~~~~~~~~~l 226 (277)
T 1o54_A 181 DVDALFLDVPDP---------------------------WNYIDKCWEAL----KGGGRFATVCPTT---NQVQETLKKL 226 (277)
T ss_dssp SEEEEEECCSCG---------------------------GGTHHHHHHHE----EEEEEEEEEESSH---HHHHHHHHHH
T ss_pred ccCEEEECCcCH---------------------------HHHHHHHHHHc----CCCCEEEEEeCCH---HHHHHHHHHH
Confidence 799999998841 23677777876 9999999988764 2222333444
Q ss_pred hcCCCEEeec
Q 016730 329 KKRDVKLVPC 338 (384)
Q Consensus 329 ~~~~~~l~~~ 338 (384)
+..++..+..
T Consensus 227 ~~~gf~~~~~ 236 (277)
T 1o54_A 227 QELPFIRIEV 236 (277)
T ss_dssp HHSSEEEEEE
T ss_pred HHCCCceeEE
Confidence 5567665543
No 52
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=2.5e-13 Score=122.56 Aligned_cols=110 Identities=18% Similarity=0.105 Sum_probs=85.6
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC--ceEEEEecCCCCcccccCCCC-CCEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV--TNTIVCNYDGNELPKVLGLNT-VDRVL 254 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~--~~v~~~~~D~~~~~~~~~~~~-fD~Vl 254 (384)
++.+|||+|||+|..+..+++. ..+.|+++|+|+.+++.+++|++.+|+ .++.++++|+..+......+. ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 6889999999999999886665 235899999999999999999999998 689999999876533222367 99999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHH--HHchhccCCCCcEEEEEeccCC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA--IDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a--~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|+|+. .+ . ..+++..+ .++ |||||++++++|+..
T Consensus 131 ~~~~~~-~~---------------~-------~~~~l~~~~~~~~----LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FN---------------L-------AEQAISLLCENNW----LKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SC---------------H-------HHHHHHHHHHTTC----EEEEEEEEEEEESSS
T ss_pred ECCCCC-Cc---------------c-------HHHHHHHHHhcCc----cCCCcEEEEEECCCC
Confidence 999942 11 0 12344444 344 499999999999875
No 53
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=9.1e-13 Score=120.06 Aligned_cols=132 Identities=24% Similarity=0.276 Sum_probs=93.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc--ccCCCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--VLGLNTVD 251 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~--~~~~~~fD 251 (384)
+.+++|++|||+|||+|..+.+++...+ .+.|+|+|+|+.+++.+.+++++. .|+.++.+|+..... ... ++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-ccee
Confidence 4567899999999999999999999887 589999999999988877777654 478888889877421 122 6899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe---ccCCccccHHHHH-H-
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST---CSIMVTENEAVID-Y- 326 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT---CSi~~~ENe~vv~-~- 326 (384)
.|++|.+ +|+ ....++.++.++| ||||+++++. |.-.....+++.. .
T Consensus 129 ~V~~~~~---------~~~---------------~~~~~l~~~~r~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 180 (210)
T 1nt2_A 129 LIYQDIA---------QKN---------------QIEILKANAEFFL----KEKGEVVIMVKARSIDSTAEPEEVFKSVL 180 (210)
T ss_dssp EEEECCC---------STT---------------HHHHHHHHHHHHE----EEEEEEEEEEEHHHHCTTSCHHHHHHHHH
T ss_pred EEEEecc---------Chh---------------HHHHHHHHHHHHh----CCCCEEEEEEecCCccccCCHHHHHHHHH
Confidence 9999842 110 0123477788876 9999999984 3222333344431 2
Q ss_pred -HHhcCCCEEeec
Q 016730 327 -ALKKRDVKLVPC 338 (384)
Q Consensus 327 -~l~~~~~~l~~~ 338 (384)
.++.. ++++..
T Consensus 181 ~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 181 KEMEGD-FKIVKH 192 (210)
T ss_dssp HHHHTT-SEEEEE
T ss_pred HHHHhh-cEEeee
Confidence 25666 777653
No 54
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.44 E-value=1.3e-13 Score=127.04 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=78.6
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCccccc
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL 245 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~ 245 (384)
..++..+....++.+|||+|||+|+.+..++.. .+.|+|+|+|+.+++.+++|+++.|+ .++.++++|+..++.
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 334444444557999999999999999999885 27899999999999999999999999 589999999987652
Q ss_pred CCCCCCEEEEcCCCCCCCcCC
Q 016730 246 GLNTVDRVLLDAPCSGTGVIS 266 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~ 266 (384)
.+.||+|++|+||.+.+...
T Consensus 142 -~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 142 -FLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp -GCCCSEEEECCCCSSGGGGG
T ss_pred -cCCCCEEEECCCcCCcchhh
Confidence 26899999999998876543
No 55
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.43 E-value=1.4e-13 Score=126.48 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=92.2
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCcccccCCCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~--~v~~~~~D~~~~~~~~~~~~fD 251 (384)
..++++.+|||+|||+|..|..+++.++..++|+++|+++.+++.+++++++.|+. ++.++.+|+.+.......++||
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 34455669999999999999999998876789999999999999999999999986 7999999987754333347899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.|++|++.. ...+++..+.++| ||||+|++..+..
T Consensus 132 ~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~dn~~~ 166 (221)
T 3dr5_A 132 LVFGQVSPM-------------------------DLKALVDAAWPLL----RRGGALVLADALL 166 (221)
T ss_dssp EEEECCCTT-------------------------THHHHHHHHHHHE----EEEEEEEETTTTG
T ss_pred eEEEcCcHH-------------------------HHHHHHHHHHHHc----CCCcEEEEeCCCC
Confidence 999997621 0124677788876 9999999977765
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=2e-13 Score=127.75 Aligned_cols=130 Identities=13% Similarity=0.057 Sum_probs=99.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~Vl 254 (384)
+.++.+|||+|||+|..+..++...++ +.|+++|+++.+++.+++|++++|+.|+.++++|+.+++.. ...++||.|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPE-LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 357889999999999999999988754 79999999999999999999999999999999998776431 1126899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~ 334 (384)
+.+-. . ...++..+.++| ||||++++..+....+|-++ +...++..+++
T Consensus 157 s~a~~----------------~----------~~~ll~~~~~~L----kpgG~l~~~~g~~~~~e~~~-~~~~l~~~G~~ 205 (249)
T 3g89_A 157 ARAVA----------------P----------LCVLSELLLPFL----EVGGAAVAMKGPRVEEELAP-LPPALERLGGR 205 (249)
T ss_dssp EESSC----------------C----------HHHHHHHHGGGE----EEEEEEEEEECSCCHHHHTT-HHHHHHHHTEE
T ss_pred ECCcC----------------C----------HHHHHHHHHHHc----CCCeEEEEEeCCCcHHHHHH-HHHHHHHcCCe
Confidence 85420 0 134677777875 99999998888755444333 33455566666
Q ss_pred Eee
Q 016730 335 LVP 337 (384)
Q Consensus 335 l~~ 337 (384)
+..
T Consensus 206 ~~~ 208 (249)
T 3g89_A 206 LGE 208 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 57
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=1.2e-12 Score=121.43 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=102.2
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCcccccCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
....+++.+|.+|||+|||+|..+..++..+++.+.|+++|+++.+++.++++++.. |..++.+...|+...+ +..+
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~~ 165 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE--LEEA 165 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC--CCTT
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCCC
Confidence 445567889999999999999999999998765579999999999999999999998 8778999999987653 2336
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHH
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l 328 (384)
.||+|++|+|. | .++|..+.++| ||||+++.++.+. +....+...+
T Consensus 166 ~~D~v~~~~~~---------~------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~l 211 (258)
T 2pwy_A 166 AYDGVALDLME---------P------------------WKVLEKAALAL----KPDRFLVAYLPNI---TQVLELVRAA 211 (258)
T ss_dssp CEEEEEEESSC---------G------------------GGGHHHHHHHE----EEEEEEEEEESCH---HHHHHHHHHH
T ss_pred CcCEEEECCcC---------H------------------HHHHHHHHHhC----CCCCEEEEEeCCH---HHHHHHHHHH
Confidence 89999999872 1 23677788876 9999999877544 2222333445
Q ss_pred hcCCCEEee
Q 016730 329 KKRDVKLVP 337 (384)
Q Consensus 329 ~~~~~~l~~ 337 (384)
++.++..+.
T Consensus 212 ~~~gf~~~~ 220 (258)
T 2pwy_A 212 EAHPFRLER 220 (258)
T ss_dssp TTTTEEEEE
T ss_pred HHCCCceEE
Confidence 556766544
No 58
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.42 E-value=1.2e-13 Score=128.97 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=94.0
Q ss_pred eCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCc
Q 016730 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (384)
Q Consensus 163 Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~ 241 (384)
+.....+...++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.+++++++.|+. ++.++.+|+...
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV 143 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 3333444445555556789999999999999999999875689999999999999999999999984 699999998764
Q ss_pred cccc-----CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 242 PKVL-----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 242 ~~~~-----~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.... ..+.||.|++|+++. ....++..+.++| ||||+|++..
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~ 190 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKD-------------------------NYLNYHKRLIDLV----KVGGVIGYDN 190 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCST-------------------------THHHHHHHHHHHB----CTTCCEEEEC
T ss_pred HHHHHhccCCCCCEEEEEEcCchH-------------------------HHHHHHHHHHHhC----CCCeEEEEec
Confidence 2211 136899999997621 1234677777875 9999999875
No 59
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.42 E-value=3.9e-13 Score=131.20 Aligned_cols=101 Identities=26% Similarity=0.312 Sum_probs=87.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.+|++|||+|||+|+.+.. +. +...|+|+|+|+..++.+++|++.+|+ .++.++++|+..+. ..||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-----~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-----VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-----CCCcEEEE
Confidence 5789999999999999988 65 357999999999999999999999998 57999999998764 67999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|||..+. +++..+.++| +|||.++|++|+-.
T Consensus 265 dpP~~~~--------------------------~~l~~~~~~L----~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 265 NLPKFAH--------------------------KFIDKALDIV----EEGGVIHYYTIGKD 295 (336)
T ss_dssp CCTTTGG--------------------------GGHHHHHHHE----EEEEEEEEEEEESS
T ss_pred CCcHhHH--------------------------HHHHHHHHHc----CCCCEEEEEEeecC
Confidence 9995421 4677788876 99999999999987
No 60
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.41 E-value=6.7e-13 Score=120.92 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=91.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.+++++++.|+.|+.++.+|+..++..+..+.||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 4678999999999999999999865 378999999999999999999999999999999999886544445789999987
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.|+ |..+ ......++ .+..+|..+.+.| ||||.|+++|
T Consensus 116 ~~~---------p~~~---~~~~~~rl--~~~~~l~~~~~~L----kpgG~l~~~t 153 (213)
T 2fca_A 116 FSD---------PWPK---KRHEKRRL--TYSHFLKKYEEVM----GKGGSIHFKT 153 (213)
T ss_dssp SCC---------CCCS---GGGGGGST--TSHHHHHHHHHHH----TTSCEEEEEE
T ss_pred CCC---------CCcC---cccccccc--CcHHHHHHHHHHc----CCCCEEEEEe
Confidence 653 1111 00000000 2456788888886 9999999887
No 61
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.41 E-value=3.5e-12 Score=128.65 Aligned_cols=87 Identities=23% Similarity=0.211 Sum_probs=74.2
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--cCCCCC
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNTV 250 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--~~~~~f 250 (384)
.+++.++++|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++|++.+|+.|+.+..+|+...... +..+.|
T Consensus 281 ~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 281 WLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp HHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCC
T ss_pred hhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCC
Confidence 356678899999999999999998876 368999999999999999999999999999999999874221 223689
Q ss_pred CEEEEcCCCCCC
Q 016730 251 DRVLLDAPCSGT 262 (384)
Q Consensus 251 D~VllDaPCSg~ 262 (384)
|.|++|||++|.
T Consensus 358 D~Vv~dPPr~g~ 369 (433)
T 1uwv_A 358 DKVLLDPARAGA 369 (433)
T ss_dssp SEEEECCCTTCC
T ss_pred CEEEECCCCccH
Confidence 999999997655
No 62
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.41 E-value=1.4e-13 Score=125.38 Aligned_cols=120 Identities=12% Similarity=0.135 Sum_probs=94.1
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCccccc
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~ 245 (384)
+.+...++...++.+|||+|||+|..|.+++..+++.++|+++|+++.+++.+++++++.|+.+ +.++++|+.......
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHh
Confidence 3444455555678899999999999999999988756899999999999999999999999975 999999986542222
Q ss_pred CC----CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 246 GL----NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 246 ~~----~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.. ++||.|++|++. ..+..++..+.++| ||||+|++..+..
T Consensus 133 ~~~~~~~~fD~v~~~~~~-------------------------~~~~~~l~~~~~~L----~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDADK-------------------------ANTDLYYEESLKLL----REGGLIAVDNVLR 177 (225)
T ss_dssp HTTTCTTCEEEEEECSCG-------------------------GGHHHHHHHHHHHE----EEEEEEEEECSSG
T ss_pred hhccCCCCccEEEECCCH-------------------------HHHHHHHHHHHHhc----CCCcEEEEeCCCc
Confidence 11 689999999861 11234677888876 9999998876543
No 63
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.40 E-value=4.6e-13 Score=123.45 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=94.7
Q ss_pred eCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCc
Q 016730 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (384)
Q Consensus 163 Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~ 241 (384)
|.....+...++...++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++++.|+. ++.++.+|+...
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 333344455555666789999999999999999998544 589999999999999999999999986 799999999775
Q ss_pred cc-ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 242 PK-VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 242 ~~-~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.. .. .++||.|++|+++.. +..++..+.++| ||||+|++..+
T Consensus 135 ~~~~~-~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~L----kpgG~lv~d~~ 177 (232)
T 3ntv_A 135 FENVN-DKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLL----KHQGLVITDNV 177 (232)
T ss_dssp HHHHT-TSCEEEEEEETTSSS-------------------------HHHHHHHHGGGE----EEEEEEEEECT
T ss_pred HHhhc-cCCccEEEEcCcHHH-------------------------HHHHHHHHHHhc----CCCeEEEEeeC
Confidence 33 22 378999999976321 244778888876 99999988544
No 64
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.40 E-value=1.2e-12 Score=117.56 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=99.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+.++.+|||+|||+|..+..+++. +.+.|+++|+++.+++.+++++...|+.++.+...|+.... .+.||.|++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~fD~i~~ 131 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----DGKFDLIVA 131 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC----CSCEEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC----CCCceEEEE
Confidence 568899999999999999988764 34689999999999999999999999988999999987653 278999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEE
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l 335 (384)
++|. ....+++..+.++| ||||++++++... +..+.+...+++.++++
T Consensus 132 ~~~~-------------------------~~~~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 132 NILA-------------------------EILLDLIPQLDSHL----NEDGQVIFSGIDY---LQLPKIEQALAENSFQI 179 (205)
T ss_dssp ESCH-------------------------HHHHHHGGGSGGGE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTEEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHhc----CCCCEEEEEecCc---ccHHHHHHHHHHcCCce
Confidence 8761 11245666667665 9999999876543 34556667777888887
Q ss_pred eec
Q 016730 336 VPC 338 (384)
Q Consensus 336 ~~~ 338 (384)
+..
T Consensus 180 ~~~ 182 (205)
T 3grz_A 180 DLK 182 (205)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.39 E-value=6.3e-12 Score=113.62 Aligned_cols=141 Identities=16% Similarity=0.242 Sum_probs=110.3
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 249 (384)
....+.+.++.+|||+|||+|..+..+++..+..+.|+++|+++.+++.+++++...|+.++.+..+|+..++ +..++
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 106 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--LPDNT 106 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--SCSSC
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--CCCCC
Confidence 3445567889999999999999999999987555799999999999999999999999989999999998765 33478
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc---------cc
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT---------EN 320 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~---------EN 320 (384)
||.|++... +. +... ...+|..+.++| ||||++++++++.... -+
T Consensus 107 fD~v~~~~~------l~------~~~~----------~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~ 160 (219)
T 3dh0_A 107 VDFIFMAFT------FH------ELSE----------PLKFLEELKRVA----KPFAYLAIIDWKKEERDKGPPPEEVYS 160 (219)
T ss_dssp EEEEEEESC------GG------GCSS----------HHHHHHHHHHHE----EEEEEEEEEEECSSCCSSSCCGGGSCC
T ss_pred eeEEEeehh------hh------hcCC----------HHHHHHHHHHHh----CCCeEEEEEEecccccccCCchhcccC
Confidence 999998533 11 1111 245788888886 9999999988664432 23
Q ss_pred HHHHHHHHhcCCCEEeec
Q 016730 321 EAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 321 e~vv~~~l~~~~~~l~~~ 338 (384)
.+.+..++++.+++++..
T Consensus 161 ~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 161 EWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 566777888889887664
No 66
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.39 E-value=1.7e-12 Score=124.23 Aligned_cols=106 Identities=15% Similarity=0.109 Sum_probs=86.6
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCE
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
++++++|++|||+|||||+.|..+++... .++|+++|+|+.+++.+++++++.|+.++.++++|+..++ ++.||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----CCCcCE
Confidence 45778999999999999998866555443 4799999999999999999999999988999999998865 278999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
|++++- + | ...++++.+.+.| ||||+|+..+
T Consensus 192 V~~~a~-----~----~----------------d~~~~l~el~r~L----kPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL-----A----E----------------PKRRVFRNIHRYV----DTETRIIYRT 222 (298)
T ss_dssp EEECTT-----C----S----------------CHHHHHHHHHHHC----CTTCEEEEEE
T ss_pred EEECCC-----c----c----------------CHHHHHHHHHHHc----CCCcEEEEEc
Confidence 998542 1 1 1245778888875 9999999875
No 67
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.39 E-value=1.8e-12 Score=128.29 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=112.1
Q ss_pred cccccceEEEeCCcCcc------hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc
Q 016730 153 PEYMAGFYMLQSASSFL------PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (384)
Q Consensus 153 ~~~~~G~~~~Qd~ss~l------~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~ 226 (384)
+.++.|+-..|.++..- ...++ ..+|.+|||+|||+|+.+..++.... .+.|+|+|+|+.+++.+++|+++.
T Consensus 187 ~l~~rgyr~~~~~a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~ 264 (373)
T 3tm4_A 187 SLHKRPWRVYDHPAHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAA 264 (373)
T ss_dssp CTTCCTTCCSCCTTCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCcccccCCCCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 55667765555544321 22333 67899999999999999998887653 358999999999999999999999
Q ss_pred CC-ceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC
Q 016730 227 GV-TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (384)
Q Consensus 227 g~-~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG 305 (384)
|+ .++.+.++|+..++.. .+.||+|++|||+.-. ......+..++.+++..+.+. | |
T Consensus 265 gl~~~i~~~~~D~~~~~~~--~~~fD~Ii~npPyg~r--------------~~~~~~~~~ly~~~~~~l~r~----l--~ 322 (373)
T 3tm4_A 265 GVLDKIKFIQGDATQLSQY--VDSVDFAISNLPYGLK--------------IGKKSMIPDLYMKFFNELAKV----L--E 322 (373)
T ss_dssp TCGGGCEEEECCGGGGGGT--CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHH----E--E
T ss_pred CCCCceEEEECChhhCCcc--cCCcCEEEECCCCCcc--------------cCcchhHHHHHHHHHHHHHHH----c--C
Confidence 99 5799999999987632 3689999999996210 011112345567788877775 4 7
Q ss_pred cEEEEEeccCCccccHHHHHHHHhcCCCEEee
Q 016730 306 GYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 306 G~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
|.++|.|| |.+.++..+.+.+++...
T Consensus 323 g~~~~i~~------~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 323 KRGVFITT------EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEEEES------CHHHHHHHHHHTTEEEEE
T ss_pred CeEEEEEC------CHHHHHHHHHHcCCEEEE
Confidence 88899988 345556666777777654
No 68
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.38 E-value=1.1e-12 Score=121.33 Aligned_cols=131 Identities=16% Similarity=0.082 Sum_probs=99.3
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~V 253 (384)
.+.++.+|||+|||+|..+..++...+ .+.|+++|+|+.+++.++++++++|+.++.++++|+.+++.. ...++||.|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 345788999999999999999988654 479999999999999999999999998899999998765421 013689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~ 333 (384)
++++. . . ...++..+.++| ||||++++..+....+|-++. ...++..++
T Consensus 146 ~~~~~----------~------~----------~~~~l~~~~~~L----kpgG~l~~~~g~~~~~~~~~~-~~~l~~~g~ 194 (240)
T 1xdz_A 146 TARAV----------A------R----------LSVLSELCLPLV----KKNGLFVALKAASAEEELNAG-KKAITTLGG 194 (240)
T ss_dssp EEECC----------S------C----------HHHHHHHHGGGE----EEEEEEEEEECC-CHHHHHHH-HHHHHHTTE
T ss_pred EEecc----------C------C----------HHHHHHHHHHhc----CCCCEEEEEeCCCchHHHHHH-HHHHHHcCC
Confidence 98652 0 0 245778888876 999999998877655544433 345566777
Q ss_pred EEee
Q 016730 334 KLVP 337 (384)
Q Consensus 334 ~l~~ 337 (384)
+++.
T Consensus 195 ~~~~ 198 (240)
T 1xdz_A 195 ELEN 198 (240)
T ss_dssp EEEE
T ss_pred eEeE
Confidence 6654
No 69
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=3.5e-12 Score=114.52 Aligned_cols=126 Identities=21% Similarity=0.212 Sum_probs=96.4
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
.+.++.+|||+|||+|..+..++.. +.+.|+|+|+++.+++.+++|++..|+ ++.++++|+..++ ..||.|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC-----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC-----CCCCEEE
Confidence 4567899999999999999988876 235899999999999999999999988 8999999988753 4799999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~ 334 (384)
+|||+... ++. ...+++..+.+. + || +|++| +.+.++.+.+..+++..+++
T Consensus 118 ~~~p~~~~---~~~-----------------~~~~~l~~~~~~----l--~~--~~~~~-~~~~~~~~~~~~~l~~~g~~ 168 (207)
T 1wy7_A 118 MNPPFGSQ---RKH-----------------ADRPFLLKAFEI----S--DV--VYSIH-LAKPEVRRFIEKFSWEHGFV 168 (207)
T ss_dssp ECCCCSSS---STT-----------------TTHHHHHHHHHH----C--SE--EEEEE-ECCHHHHHHHHHHHHHTTEE
T ss_pred EcCCCccc---cCC-----------------chHHHHHHHHHh----c--Cc--EEEEE-eCCcCCHHHHHHHHHHCCCe
Confidence 99996332 111 113457777776 2 43 67777 33556777777778877776
Q ss_pred Eee
Q 016730 335 LVP 337 (384)
Q Consensus 335 l~~ 337 (384)
+..
T Consensus 169 ~~~ 171 (207)
T 1wy7_A 169 VTH 171 (207)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 70
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=2.3e-12 Score=121.30 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=99.9
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-C--CceEEEEecCCCCccccc
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-G--VTNTIVCNYDGNELPKVL 245 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-g--~~~v~~~~~D~~~~~~~~ 245 (384)
..+..+++.+|.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++|++.. | ..++.+..+|+...+ +
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--~ 167 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--L 167 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--C
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--C
Confidence 3445567889999999999999999999998765689999999999999999999988 7 678999999987753 2
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHH
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVID 325 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~ 325 (384)
..+.||+|++|+| +| .++|.++.+.| +|||++++++++. +.....++
T Consensus 168 ~~~~~D~v~~~~~---------~~------------------~~~l~~~~~~L----~pgG~l~~~~~~~--~~~~~~~~ 214 (280)
T 1i9g_A 168 PDGSVDRAVLDML---------AP------------------WEVLDAVSRLL----VAGGVLMVYVATV--TQLSRIVE 214 (280)
T ss_dssp CTTCEEEEEEESS---------CG------------------GGGHHHHHHHE----EEEEEEEEEESSH--HHHHHHHH
T ss_pred CCCceeEEEECCc---------CH------------------HHHHHHHHHhC----CCCCEEEEEeCCH--HHHHHHHH
Confidence 2468999999877 11 13577788876 9999999988754 22334444
Q ss_pred HHHhcCCC
Q 016730 326 YALKKRDV 333 (384)
Q Consensus 326 ~~l~~~~~ 333 (384)
.+.++.++
T Consensus 215 ~l~~~~~f 222 (280)
T 1i9g_A 215 ALRAKQCW 222 (280)
T ss_dssp HHHHHSSB
T ss_pred HHHhcCCc
Confidence 44332443
No 71
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.37 E-value=1.7e-12 Score=117.23 Aligned_cols=112 Identities=16% Similarity=0.054 Sum_probs=84.5
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++|++..|+.++.++++|+..+... ..+.||+|++|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ-KGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS-CCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh-cCCCCCEEEECC
Confidence 68899999999999998877652 258999999999999999999999998899999998764221 236899999999
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
|+. .+ . ..+++....+. +.|+|||++++++|+...
T Consensus 131 p~~-~~------------~----------~~~~l~~l~~~--~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 131 PFR-RG------------L----------LEETINLLEDN--GWLADEALIYVESEVENG 165 (202)
T ss_dssp SSS-TT------------T----------HHHHHHHHHHT--TCEEEEEEEEEEEEGGGC
T ss_pred CCC-CC------------c----------HHHHHHHHHhc--CccCCCcEEEEEECCCcc
Confidence 942 11 0 11233444331 114999999999887543
No 72
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=6.6e-12 Score=114.49 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=85.5
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHcc----CCceEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCcc---
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELP--- 242 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~----~~g~V~a~D~~~~rl~~l~~n~~r~g-----~~~v~~~~~D~~~~~--- 242 (384)
.++++.+|||+|||+|..+.++++..+ +.+.|+++|+++.+++.+++++++.| ..++.+..+|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 477899999999999999999999875 45799999999999999999999998 678999999987643
Q ss_pred -cccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 243 -KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 243 -~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.. .++||+|++++++.. ++..+.+.| ||||+++.+.-
T Consensus 157 ~~~--~~~fD~I~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKE--LGLFDAIHVGASASE----------------------------LPEILVDLL----AENGKLIIPIE 194 (227)
T ss_dssp HHH--HCCEEEEEECSBBSS----------------------------CCHHHHHHE----EEEEEEEEEEE
T ss_pred Ccc--CCCcCEEEECCchHH----------------------------HHHHHHHhc----CCCcEEEEEEc
Confidence 22 268999999988531 224455664 99999987653
No 73
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.36 E-value=1.1e-11 Score=114.74 Aligned_cols=133 Identities=14% Similarity=0.207 Sum_probs=101.7
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+.++.+|||+|||+|..+..+++..+ +.|+++|+|+..++.+++++...|+.+ +.++++|+..++. ..++||+|
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v 118 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF--QNEELDLI 118 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS--CTTCEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC--CCCCEEEE
Confidence 456889999999999999999999864 489999999999999999999999876 9999999987762 34789999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcccc-------------
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN------------- 320 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~EN------------- 320 (384)
++...... ... .++|..+.++| ||||++++++++......
T Consensus 119 ~~~~~l~~-------------~~~----------~~~l~~~~~~L----~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (257)
T 3f4k_A 119 WSEGAIYN-------------IGF----------ERGMNEWSKYL----KKGGFIAVSEASWFTSERPAEIEDFWMDAYP 171 (257)
T ss_dssp EEESCSCC-------------CCH----------HHHHHHHHTTE----EEEEEEEEEEEEESSSCCCHHHHHHHHHHCT
T ss_pred EecChHhh-------------cCH----------HHHHHHHHHHc----CCCcEEEEEEeeccCCCChHHHHHHHHHhCC
Confidence 98643211 111 34678888876 999999999876444322
Q ss_pred ----HHHHHHHHhcCCCEEeec
Q 016730 321 ----EAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 321 ----e~vv~~~l~~~~~~l~~~ 338 (384)
...+..+++..|++++..
T Consensus 172 ~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 172 EISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp TCCBHHHHHHHHHHTTEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEE
Confidence 223345566677776653
No 74
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.35 E-value=2.8e-12 Score=115.48 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=93.3
Q ss_pred ceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 016730 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (384)
Q Consensus 158 G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D 237 (384)
|.+..+..........+.++++.+|||+|||+|..+.+++.. .+.|+++|+++.+++.++++++++|+.++.+..+|
T Consensus 57 ~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 133 (210)
T 3lbf_A 57 GQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD 133 (210)
T ss_dssp SCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 444444433344556677889999999999999999999987 37899999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 238 ~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
+...... .++||+|+++.++... | ..+.+.| ||||+++.+...
T Consensus 134 ~~~~~~~--~~~~D~i~~~~~~~~~------~----------------------~~~~~~L----~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQA--RAPFDAIIVTAAPPEI------P----------------------TALMTQL----DEGGILVLPVGE 176 (210)
T ss_dssp GGGCCGG--GCCEEEEEESSBCSSC------C----------------------THHHHTE----EEEEEEEEEECS
T ss_pred cccCCcc--CCCccEEEEccchhhh------h----------------------HHHHHhc----ccCcEEEEEEcC
Confidence 8775432 3789999998654211 1 1234554 999999988765
No 75
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.35 E-value=1.3e-11 Score=118.57 Aligned_cols=138 Identities=10% Similarity=0.043 Sum_probs=105.3
Q ss_pred hhhhcC-CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCC
Q 016730 170 PVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 170 ~~~~L~-~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~ 247 (384)
+...+. ++++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...|+. ++.+..+|+..++ +..
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 183 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--FDK 183 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--CCT
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--CCC
Confidence 344555 7789999999999999999999876 268999999999999999999999986 6999999998875 334
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccc--------
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTE-------- 319 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~E-------- 319 (384)
+.||+|++.-. + .+. . +.++|..+.++| ||||++++++.......
T Consensus 184 ~~fD~V~~~~~------l------~~~-~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~ 236 (312)
T 3vc1_A 184 GAVTASWNNES------T------MYV-D----------LHDLFSEHSRFL----KVGGRYVTITGCWNPRYGQPSKWVS 236 (312)
T ss_dssp TCEEEEEEESC------G------GGS-C----------HHHHHHHHHHHE----EEEEEEEEEEEEECTTTCSCCHHHH
T ss_pred CCEeEEEECCc------h------hhC-C----------HHHHHHHHHHHc----CCCcEEEEEEccccccccchhHHHH
Confidence 78999997321 1 111 1 456788888886 99999999886544321
Q ss_pred -----------cHHHHHHHHhcCCCEEeec
Q 016730 320 -----------NEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 320 -----------Ne~vv~~~l~~~~~~l~~~ 338 (384)
..+.+..++++.|++++..
T Consensus 237 ~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 237 QINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp HHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred HHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 2344556667778877654
No 76
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.35 E-value=4.4e-12 Score=111.55 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=94.0
Q ss_pred cchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce--EEEEecCCCCccccc
Q 016730 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN--TIVCNYDGNELPKVL 245 (384)
Q Consensus 168 ~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~--v~~~~~D~~~~~~~~ 245 (384)
......+.+.++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...|+.+ +.+...|+.....
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-- 116 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-- 116 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--
Confidence 34455566778999999999999999888776 4689999999999999999999999987 9999999877432
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.+.||.|++++|... ... ...+++..+.+.| +|||+++.++++.
T Consensus 117 -~~~~D~v~~~~~~~~--------------~~~-------~~~~~l~~~~~~L----~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 -DRKYNKIITNPPIRA--------------GKE-------VLHRIIEEGKELL----KDNGEIWVVIQTK 160 (194)
T ss_dssp -TSCEEEEEECCCSTT--------------CHH-------HHHHHHHHHHHHE----EEEEEEEEEEEST
T ss_pred -cCCceEEEECCCccc--------------chh-------HHHHHHHHHHHHc----CCCCEEEEEECCC
Confidence 368999999987321 111 2345778888876 9999999988765
No 77
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.35 E-value=1.8e-12 Score=120.41 Aligned_cols=117 Identities=16% Similarity=0.246 Sum_probs=88.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--------CCceEEEEecCCCC-cccccCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--------GVTNTIVCNYDGNE-LPKVLGL 247 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--------g~~~v~~~~~D~~~-~~~~~~~ 247 (384)
+++.+|||+|||+|+.+..++...+ .+.|+|+|+|+.+++.++++++.+ |+.|+.++.+|+.. ++..+..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 4788999999999999999998864 368999999999999999999987 88899999999987 4444445
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
..||.|++.-|..-. + ......++ .+.+++..+.++| ||||.|+++|
T Consensus 127 ~~~d~v~~~~p~p~~---------k---~~~~~~r~--~~~~~l~~~~~~L----kpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHF---------K---QRKHKARI--ITNTLLSEYAYVL----KEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------------------CSSC--CCHHHHHHHHHHE----EEEEEEEEEE
T ss_pred cccCEEEEECCCccc---------c---cchhHHhh--ccHHHHHHHHHHc----CCCCEEEEEe
Confidence 789999877553111 1 00000000 1356888888886 9999999866
No 78
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.35 E-value=9.5e-12 Score=115.78 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=94.6
Q ss_pred CCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce
Q 016730 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (384)
Q Consensus 151 ~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~ 230 (384)
..++|.......|..........+.+.++.+|||+|||+|..+..+++.. +.|+++|+|+.+++.+++++...|+.+
T Consensus 10 ~~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~ 86 (260)
T 1vl5_A 10 HHHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQ 86 (260)
T ss_dssp -------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred cceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCc
Confidence 34567677777777776667777888899999999999999998887764 489999999999999999999999989
Q ss_pred EEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE
Q 016730 231 TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (384)
Q Consensus 231 v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY 310 (384)
+.+..+|+..++ +..+.||+|++... +.+...+ ..+|.++.++| ||||+++.
T Consensus 87 v~~~~~d~~~l~--~~~~~fD~V~~~~~------------l~~~~d~----------~~~l~~~~r~L----kpgG~l~~ 138 (260)
T 1vl5_A 87 VEYVQGDAEQMP--FTDERFHIVTCRIA------------AHHFPNP----------ASFVSEAYRVL----KKGGQLLL 138 (260)
T ss_dssp EEEEECCC-CCC--SCTTCEEEEEEESC------------GGGCSCH----------HHHHHHHHHHE----EEEEEEEE
T ss_pred eEEEEecHHhCC--CCCCCEEEEEEhhh------------hHhcCCH----------HHHHHHHHHHc----CCCCEEEE
Confidence 999999998865 33478999998532 1111111 24678888876 99999998
Q ss_pred Eec
Q 016730 311 STC 313 (384)
Q Consensus 311 sTC 313 (384)
++.
T Consensus 139 ~~~ 141 (260)
T 1vl5_A 139 VDN 141 (260)
T ss_dssp EEE
T ss_pred EEc
Confidence 754
No 79
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.35 E-value=7.1e-12 Score=115.52 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=97.9
Q ss_pred eCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc
Q 016730 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP 242 (384)
Q Consensus 163 Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~ 242 (384)
|++++...+..+++.++.+|||+|||+|..+..+++.. ..|+++|+++.+++.+++++...|+.++.+..+|+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP 82 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC
Confidence 66777788888999999999999999999998887763 489999999999999999999999989999999998765
Q ss_pred cccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 243 KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 243 ~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
+..+.||.|++... + .+... ...+|..+.++| ||||+++.++..
T Consensus 83 --~~~~~fD~v~~~~~------l------~~~~~----------~~~~l~~~~~~L----kpgG~l~~~~~~ 126 (239)
T 1xxl_A 83 --FPDDSFDIITCRYA------A------HHFSD----------VRKAVREVARVL----KQDGRFLLVDHY 126 (239)
T ss_dssp --SCTTCEEEEEEESC------G------GGCSC----------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred --CCCCcEEEEEECCc------h------hhccC----------HHHHHHHHHHHc----CCCcEEEEEEcC
Confidence 33478999998532 1 11111 135678888876 999999987654
No 80
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.34 E-value=1.5e-11 Score=114.33 Aligned_cols=148 Identities=15% Similarity=0.147 Sum_probs=96.2
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCC-cccccC---CCCCCE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE-LPKVLG---LNTVDR 252 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~-~~~~~~---~~~fD~ 252 (384)
++.+|||+|||+|..+..++...++ +.|+++|+++.+++.+++|++.+|+.+ +.++++|+.. +...+. .+.||.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 5789999999999999999887653 789999999999999999999999975 9999999775 222222 157999
Q ss_pred EEEcCCCCCCCc----C-CC-----CchhhccC------CHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 253 VLLDAPCSGTGV----I-SK-----DESVKTSK------SLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 253 VllDaPCSg~G~----~-~r-----~p~~~~~~------~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|++|||+...+. + ++ .|...+.. .+... + .....++..+..++ +++|.+. +.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~--l-~~~~~~~~~~~~~l----~~~g~~~---~~~~ 213 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGE--L-EFVKRIIHDSLQLK----KRLRWYS---CMLG 213 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTH--H-HHHHHHHHHHHHHG----GGBSCEE---EEES
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCE--E-EEEHHHHHHHHhcc----cceEEEE---ECCC
Confidence 999999976651 1 01 11111110 01111 1 12234666666665 8888664 3344
Q ss_pred ccccHHHHHHHHhcCCCEEe
Q 016730 317 VTENEAVIDYALKKRDVKLV 336 (384)
Q Consensus 317 ~~ENe~vv~~~l~~~~~~l~ 336 (384)
..++.+.+..++++.+++-+
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v 233 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKV 233 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEE
T ss_pred ChhHHHHHHHHHHHcCCCce
Confidence 45564556667777776443
No 81
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.34 E-value=9e-12 Score=116.54 Aligned_cols=132 Identities=19% Similarity=0.229 Sum_probs=100.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+.++.+|||+|||+|..+..+++. ..+.|+++|+|+..++.++++++..|+.+ +.++.+|+..++. ..++||+|+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~i~ 119 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF--RNEELDLIW 119 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--CTTCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC--CCCCEEEEE
Confidence 568999999999999999998887 34699999999999999999999999864 9999999988762 347899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcccc--------------
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN-------------- 320 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~EN-------------- 320 (384)
+..+.. +. .. .++|..+.++| ||||+++.++++....+.
T Consensus 120 ~~~~~~------------~~-~~----------~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (267)
T 3kkz_A 120 SEGAIY------------NI-GF----------ERGLNEWRKYL----KKGGYLAVSECSWFTDERPAEINDFWMDAYPE 172 (267)
T ss_dssp ESSCGG------------GT-CH----------HHHHHHHGGGE----EEEEEEEEEEEEESSSCCCHHHHHHHHHHCTT
T ss_pred EcCCce------------ec-CH----------HHHHHHHHHHc----CCCCEEEEEEeeecCCCChHHHHHHHHHhCCC
Confidence 865421 11 11 34677888876 999999999987554432
Q ss_pred ---HHHHHHHHhcCCCEEeec
Q 016730 321 ---EAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 321 ---e~vv~~~l~~~~~~l~~~ 338 (384)
...+...+++.|++++..
T Consensus 173 ~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 173 IDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp CEEHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEE
Confidence 223334556677777654
No 82
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=3.9e-12 Score=122.86 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=77.5
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
.+...+.+++|++|||+|||+|..+..+++.....++|+++|+++.+++.++++++..|+.++.+..+|+...... .+
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~--~~ 143 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE--FS 143 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG--GC
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc--CC
Confidence 3445567889999999999999999999998764578999999999999999999999998999999998875332 26
Q ss_pred CCCEEEEcCCCCC
Q 016730 249 TVDRVLLDAPCSG 261 (384)
Q Consensus 249 ~fD~VllDaPCSg 261 (384)
+||+|++++++..
T Consensus 144 ~fD~Iv~~~~~~~ 156 (317)
T 1dl5_A 144 PYDVIFVTVGVDE 156 (317)
T ss_dssp CEEEEEECSBBSC
T ss_pred CeEEEEEcCCHHH
Confidence 8999999988643
No 83
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.34 E-value=1.2e-11 Score=114.03 Aligned_cols=127 Identities=12% Similarity=0.127 Sum_probs=98.5
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+++|++|||+|||+|..++.++...+ .+.|+|+|+++..++.+++|++++|+.+ +.+..+|+...... ...||.|+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--~~~~D~Iv 89 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--TDQVSVIT 89 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--CcCCCEEE
Confidence 45789999999999999999888643 4689999999999999999999999975 99999998643211 13699988
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~ 334 (384)
+ .|.| ..+-.+||..+...| +++|++|.+.- .+.+.+...|.+++|.
T Consensus 90 i----aG~G--------------------g~~i~~Il~~~~~~L----~~~~~lVlq~~-----~~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 90 I----AGMG--------------------GRLIARILEEGLGKL----ANVERLILQPN-----NREDDLRIWLQDHGFQ 136 (225)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGC----TTCCEEEEEES-----SCHHHHHHHHHHTTEE
T ss_pred E----cCCC--------------------hHHHHHHHHHHHHHh----CCCCEEEEECC-----CCHHHHHHHHHHCCCE
Confidence 6 1333 122356888888875 99999998654 3677777777888888
Q ss_pred Eeec
Q 016730 335 LVPC 338 (384)
Q Consensus 335 l~~~ 338 (384)
++..
T Consensus 137 i~~e 140 (225)
T 3kr9_A 137 IVAE 140 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 84
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=6.2e-12 Score=124.57 Aligned_cols=125 Identities=9% Similarity=0.013 Sum_probs=94.9
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc---eEEEEecCCCCccccc
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT---NTIVCNYDGNELPKVL 245 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~---~v~~~~~D~~~~~~~~ 245 (384)
+....+...++.+|||+|||+|..+..++...+ ...|+++|+|+.+++.+++|++.+|+. ++.+...|+... +
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~---~ 288 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG---V 288 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT---C
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc---C
Confidence 344556667789999999999999999999864 379999999999999999999999976 488889998763 2
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ 318 (384)
..++||.|++|||......+.+ ....+++..+.+.| ||||+++++.-+..+.
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~-----------------~~~~~~l~~~~~~L----kpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTD-----------------NVAWEMFHHARRCL----KINGELYIVANRHLDY 340 (375)
T ss_dssp CTTCEEEEEECCCC-------C-----------------CHHHHHHHHHHHHE----EEEEEEEEEEETTSCH
T ss_pred CCCCeeEEEECCCcccCcccCH-----------------HHHHHHHHHHHHhC----CCCcEEEEEEECCcCH
Confidence 3468999999999632211111 01235788888886 9999999977655443
No 85
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.33 E-value=3.8e-13 Score=121.58 Aligned_cols=116 Identities=9% Similarity=0.053 Sum_probs=90.7
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~ 247 (384)
+...++...++.+|||+|||+|..|.+++..++..+.|+++|+++.+++.+++++++.|+. ++.++.+|+........
T Consensus 47 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 125 (210)
T 3c3p_A 47 LLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQR- 125 (210)
T ss_dssp HHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCC-
T ss_pred HHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCC-
Confidence 3333344446789999999999999999998765689999999999999999999999986 48999999876422222
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+ ||.|++|+++. .+..++..+.++| ||||++++.++..
T Consensus 126 ~-fD~v~~~~~~~-------------------------~~~~~l~~~~~~L----kpgG~lv~~~~~~ 163 (210)
T 3c3p_A 126 D-IDILFMDCDVF-------------------------NGADVLERMNRCL----AKNALLIAVNALR 163 (210)
T ss_dssp S-EEEEEEETTTS-------------------------CHHHHHHHHGGGE----EEEEEEEEESSSS
T ss_pred C-CCEEEEcCChh-------------------------hhHHHHHHHHHhc----CCCeEEEEECccc
Confidence 5 99999996531 1235677888876 9999999977654
No 86
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.33 E-value=4.3e-12 Score=111.12 Aligned_cols=111 Identities=17% Similarity=0.138 Sum_probs=84.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
..++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++|++..|+. ++.++.+|+.+..... .+.||+|+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~fD~i~ 105 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-TGRFDLVF 105 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-CSCEEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-cCCCCEEE
Confidence 457889999999999999988876 3468999999999999999999999985 6999999987742222 25799999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH--HchhccCCCCcEEEEEeccCC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI--DMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~--~~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|+|+.. . ...+.+.... ++ |||||++++++++-.
T Consensus 106 ~~~~~~~----------------~-------~~~~~~~~l~~~~~----L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 106 LDPPYAK----------------E-------TIVATIEALAAKNL----LSEQVMVVCETDKTV 142 (177)
T ss_dssp ECCSSHH----------------H-------HHHHHHHHHHHTTC----EEEEEEEEEEEETTC
T ss_pred ECCCCCc----------------c-------hHHHHHHHHHhCCC----cCCCcEEEEEECCcc
Confidence 9998410 0 0122333333 55 499999999887764
No 87
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.32 E-value=1.3e-11 Score=114.21 Aligned_cols=114 Identities=11% Similarity=-0.001 Sum_probs=90.1
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~ 249 (384)
...+.+.++.+|||+|||+|..+..+++..+ ..|+++|+++.+++.++++++..|+. ++.+..+|+..++. .+.
T Consensus 29 ~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~ 103 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA---NEK 103 (256)
T ss_dssp HHHTCCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC---SSC
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc---CCC
Confidence 4445678899999999999999999998862 58999999999999999999999985 79999999988754 378
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
||+|++.. ++..-++ ..++|..+.++| ||||+++.++...
T Consensus 104 fD~V~~~~------~~~~~~~----------------~~~~l~~~~r~L----kpgG~l~~~~~~~ 143 (256)
T 1nkv_A 104 CDVAACVG------ATWIAGG----------------FAGAEELLAQSL----KPGGIMLIGEPYW 143 (256)
T ss_dssp EEEEEEES------CGGGTSS----------------SHHHHHHHTTSE----EEEEEEEEEEEEE
T ss_pred CCEEEECC------ChHhcCC----------------HHHHHHHHHHHc----CCCeEEEEecCcc
Confidence 99999722 1111111 134677888875 9999999987543
No 88
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.32 E-value=2e-12 Score=118.45 Aligned_cols=118 Identities=19% Similarity=0.145 Sum_probs=89.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc-ccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~-~~~~~~~~fD~Vll 255 (384)
.++.+|||+|||+|..+..+|+..++ ..|+|+|+++.+++.+++++++.|+.|+.++.+|+..+ +..+..+.||.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 36789999999999999999998754 68999999999999999999999999999999998874 32344578999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.-|.. +.+....+.+. .|..++..+.+.| ||||+++++|-
T Consensus 112 ~~~~p----~~~~~~~~rr~----------~~~~~l~~~~r~L----kpGG~l~i~td 151 (218)
T 3dxy_A 112 FFPDP----WHKARHNKRRI----------VQVPFAELVKSKL----QLGGVFHMATD 151 (218)
T ss_dssp ESCCC----CCSGGGGGGSS----------CSHHHHHHHHHHE----EEEEEEEEEES
T ss_pred eCCCC----ccchhhhhhhh----------hhHHHHHHHHHHc----CCCcEEEEEeC
Confidence 74421 01111111000 1235778888876 99999998873
No 89
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.31 E-value=4.2e-11 Score=108.35 Aligned_cols=118 Identities=15% Similarity=0.078 Sum_probs=88.4
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCcccc
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKV 244 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-----~v~~~~~D~~~~~~~ 244 (384)
+...+...++.+|||+|||+|..+..+++..+ ...|+++|+|+..++.+++++...|+. ++.+..+|+...+..
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR 99 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG
T ss_pred HHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc
Confidence 34445556788999999999999999888643 368999999999999999999888876 699999998665432
Q ss_pred cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 245 ~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.++||.|++... + ......+ ..++|+.+.++| ||||.++.+.+.
T Consensus 100 --~~~fD~v~~~~~------l-------~~~~~~~-------~~~~l~~~~~~L----kpgG~li~~~~~ 143 (217)
T 3jwh_A 100 --FHGYDAATVIEV------I-------EHLDLSR-------LGAFERVLFEFA----QPKIVIVTTPNI 143 (217)
T ss_dssp --GCSCSEEEEESC------G-------GGCCHHH-------HHHHHHHHHTTT----CCSEEEEEEEBH
T ss_pred --CCCcCEEeeHHH------H-------HcCCHHH-------HHHHHHHHHHHc----CCCEEEEEccCc
Confidence 268999997532 1 1112221 245778888875 999988776664
No 90
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.31 E-value=1.4e-11 Score=110.02 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=89.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc-----------
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----------- 243 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~----------- 243 (384)
++++.+|||+|||||+.|.++++.+++ .+.|+|+|+++.. ...++.++.+|+...+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 467899999999999999999998863 5899999999831 24567888899877540
Q ss_pred ------------ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 244 ------------VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 244 ------------~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+....||.|++|.++..+|. ...+.......+.++|..+.++| ||||.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~-----------~~~d~~~~~~~~~~~l~~~~~~L----kpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN-----------KIDDHLNSCELTLSITHFMEQYI----NIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSC-----------HHHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC-----------cccCHHHHHHHHHHHHHHHHHHc----cCCCEEEEE
Confidence 023468999999987554442 11223334456778889998886 999999976
Q ss_pred eccCCccccHHHHHHHHhc
Q 016730 312 TCSIMVTENEAVIDYALKK 330 (384)
Q Consensus 312 TCSi~~~ENe~vv~~~l~~ 330 (384)
+.. .++...+...++.
T Consensus 154 ~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 154 MYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp EEC---STTHHHHHHHHHT
T ss_pred EeC---CCCHHHHHHHHHH
Confidence 533 3444444445544
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=1.8e-11 Score=106.78 Aligned_cols=126 Identities=19% Similarity=0.269 Sum_probs=94.6
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 249 (384)
....+.+.++.+|||+|||+|..+..++. ....|+++|+++.+++.++++++..|+.++.+...|+... +..+.
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---~~~~~ 100 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV---LDKLE 100 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---GGGCC
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---ccCCC
Confidence 34455677899999999999999998887 3479999999999999999999999998899999998762 22268
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHh
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~ 329 (384)
||.|+++.| .+ ..+++..+.+ + |||.+++++|+. ++...+...++
T Consensus 101 ~D~i~~~~~--------~~------------------~~~~l~~~~~-----~-~gG~l~~~~~~~---~~~~~~~~~l~ 145 (183)
T 2yxd_A 101 FNKAFIGGT--------KN------------------IEKIIEILDK-----K-KINHIVANTIVL---ENAAKIINEFE 145 (183)
T ss_dssp CSEEEECSC--------SC------------------HHHHHHHHHH-----T-TCCEEEEEESCH---HHHHHHHHHHH
T ss_pred CcEEEECCc--------cc------------------HHHHHHHHhh-----C-CCCEEEEEeccc---ccHHHHHHHHH
Confidence 999999876 11 1235555554 3 999999998754 33333445556
Q ss_pred cCCCEEe
Q 016730 330 KRDVKLV 336 (384)
Q Consensus 330 ~~~~~l~ 336 (384)
+.++.+.
T Consensus 146 ~~g~~~~ 152 (183)
T 2yxd_A 146 SRGYNVD 152 (183)
T ss_dssp HTTCEEE
T ss_pred HcCCeEE
Confidence 6665543
No 92
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.30 E-value=1.5e-12 Score=127.21 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=101.0
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCC----ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCC
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~----g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~f 250 (384)
.+.++.+|||.|||+|+.+..++..+... ..|+|+|+++..++.++.|+...|+ ++.+.++|+.... ....|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~---~~~~f 202 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL---LVDPV 202 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC---CCCCE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc---ccCCc
Confidence 56678999999999999999999887543 6899999999999999999999998 6788889987643 23689
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe-ccCCccccHHHHH-HHH
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST-CSIMVTENEAVID-YAL 328 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT-CSi~~~ENe~vv~-~~l 328 (384)
|+|++|||+ |.+.. ++....+...........+..++.++++.| ||||++++.+ .++...+....+. +++
T Consensus 203 D~Ii~NPPf---g~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~L----k~gG~~~~v~p~~~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 203 DVVISDLPV---GYYPD-DENAKTFELCREEGHSFAHFLFIEQGMRYT----KPGGYLFFLVPDAMFGTSDFAKVDKFIK 274 (344)
T ss_dssp EEEEEECCC---SEESC-HHHHTTSTTCCSSSCEEHHHHHHHHHHHTE----EEEEEEEEEEEGGGGGSTTHHHHHHHHH
T ss_pred cEEEECCCC---CCcCc-hhhhhhccccCCCCcchHHHHHHHHHHHHh----CCCCEEEEEECchhcCCchHHHHHHHHH
Confidence 999999997 33321 111100000000001124556889999986 9999998887 3444444455555 444
Q ss_pred hc
Q 016730 329 KK 330 (384)
Q Consensus 329 ~~ 330 (384)
++
T Consensus 275 ~~ 276 (344)
T 2f8l_A 275 KN 276 (344)
T ss_dssp HH
T ss_pred hC
Confidence 44
No 93
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.30 E-value=6.2e-12 Score=110.42 Aligned_cols=128 Identities=19% Similarity=0.290 Sum_probs=97.4
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~ 247 (384)
.....+.+.++.+|||+|||+|..+..++... ..|+++|+++.+++.+++++...|+ .++.+.+.|+...... .
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~ 98 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK--I 98 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT--S
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc--C
Confidence 34445677889999999999999998888764 6899999999999999999999998 6788888887652111 1
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHH
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~ 327 (384)
+.||.|+++.+.. + ...++..+.+.| +|||++++++++. ++...+..+
T Consensus 99 ~~~D~v~~~~~~~-------~------------------~~~~l~~~~~~l----~~gG~l~~~~~~~---~~~~~~~~~ 146 (192)
T 1l3i_A 99 PDIDIAVVGGSGG-------E------------------LQEILRIIKDKL----KPGGRIIVTAILL---ETKFEAMEC 146 (192)
T ss_dssp CCEEEEEESCCTT-------C------------------HHHHHHHHHHTE----EEEEEEEEEECBH---HHHHHHHHH
T ss_pred CCCCEEEECCchH-------H------------------HHHHHHHHHHhc----CCCcEEEEEecCc---chHHHHHHH
Confidence 5799999986520 0 145778888876 9999999998864 344444555
Q ss_pred HhcCCC
Q 016730 328 LKKRDV 333 (384)
Q Consensus 328 l~~~~~ 333 (384)
+++.++
T Consensus 147 l~~~g~ 152 (192)
T 1l3i_A 147 LRDLGF 152 (192)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 565554
No 94
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=3e-11 Score=111.66 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=99.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+++|++|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ +.+..+|+...... ...||.|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--~~~~D~Iv 95 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--ADNIDTIT 95 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--ccccCEEE
Confidence 4678999999999999999988863 34689999999999999999999999975 99999998775432 23799987
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~ 334 (384)
+ .|.| ..+-.+||..+...+ +++|+||.+.- .+++.|...|..++|.
T Consensus 96 i----aGmG--------------------g~lI~~IL~~~~~~l----~~~~~lIlqp~-----~~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 96 I----CGMG--------------------GRLIADILNNDIDKL----QHVKTLVLQPN-----NREDDLRKWLAANDFE 142 (230)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHTTEE
T ss_pred E----eCCc--------------------hHHHHHHHHHHHHHh----CcCCEEEEECC-----CChHHHHHHHHHCCCE
Confidence 6 2333 123356788888775 99999998763 3577777778888888
Q ss_pred Eeec
Q 016730 335 LVPC 338 (384)
Q Consensus 335 l~~~ 338 (384)
++..
T Consensus 143 i~~E 146 (230)
T 3lec_A 143 IVAE 146 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
No 95
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.29 E-value=2.3e-11 Score=114.61 Aligned_cols=113 Identities=14% Similarity=0.150 Sum_probs=88.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
+++|.+|||+|||+|..+..+++.... ..+|+|+|+|+.+++.++++++..+.. ++.++++|+.+++. +.||.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~----~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI----ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC----CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc----cccccc
Confidence 468999999999999999999988753 348999999999999999999988874 69999999988753 579999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
++.- ++ .+ ..+.+ ...+|.++.+.| ||||+|+.+.-...
T Consensus 144 ~~~~------~l------~~-~~~~~-------~~~~l~~i~~~L----kpGG~lii~e~~~~ 182 (261)
T 4gek_A 144 VLNF------TL------QF-LEPSE-------RQALLDKIYQGL----NPGGALVLSEKFSF 182 (261)
T ss_dssp EEES------CG------GG-SCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEBCC
T ss_pred eeee------ee------ee-cCchh-------HhHHHHHHHHHc----CCCcEEEEEeccCC
Confidence 8732 11 11 12221 235788888886 99999998865543
No 96
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.29 E-value=4.8e-11 Score=113.76 Aligned_cols=124 Identities=11% Similarity=0.064 Sum_probs=93.6
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~ 248 (384)
....+.+++|.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.+++++...|+. ++.+..+|+..+ .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~ 136 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----DE 136 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----CC
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----CC
Confidence 34455678999999999999999999998864 68999999999999999999999987 799999998765 37
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
.||+|++... +..-|+..-....+ ....++..+.++| ||||+++..+.+...
T Consensus 137 ~fD~v~~~~~------~~~~~d~~~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 137 PVDRIVSLGA------FEHFADGAGDAGFE-------RYDTFFKKFYNLT----PDDGRMLLHTITIPD 188 (302)
T ss_dssp CCSEEEEESC------GGGTTCCSSCCCTT-------HHHHHHHHHHHSS----CTTCEEEEEEEECCC
T ss_pred CccEEEEcch------HHhcCccccccchh-------HHHHHHHHHHHhc----CCCcEEEEEEEeccC
Confidence 8999998532 22111100000011 2245778888875 999999998887643
No 97
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=1.2e-11 Score=120.22 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=87.1
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC-----------CceEEEEecC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----------VTNTIVCNYD 237 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g-----------~~~v~~~~~D 237 (384)
.....+++.+|.+|||+|||+|..+..++...+..+.|+++|+++.+++.+++|+..+| ..++.+..+|
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 34556678899999999999999999999987656899999999999999999999754 3579999999
Q ss_pred CCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 238 ~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+......+..+.||+|++|+|. |. .++..+.+.| ||||+|+..+
T Consensus 176 ~~~~~~~~~~~~fD~V~~~~~~---------~~------------------~~l~~~~~~L----kpgG~lv~~~ 219 (336)
T 2b25_A 176 ISGATEDIKSLTFDAVALDMLN---------PH------------------VTLPVFYPHL----KHGGVCAVYV 219 (336)
T ss_dssp TTCCC-------EEEEEECSSS---------TT------------------TTHHHHGGGE----EEEEEEEEEE
T ss_pred hHHcccccCCCCeeEEEECCCC---------HH------------------HHHHHHHHhc----CCCcEEEEEe
Confidence 9876422333579999999872 11 1567777775 9999998544
No 98
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=111.88 Aligned_cols=109 Identities=22% Similarity=0.307 Sum_probs=85.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc-ccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~-~~~~~~fD~ 252 (384)
+.+++|++|||+|||+|..+.++++..++.+.|+|+|+++.+++.+.+++++. .++.++.+|+..... ....+.||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEE
Confidence 45678999999999999999999998755579999999999998888888775 678999999987421 112368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
|++|+| .|+ ....++.++.+.| ||||+++.+.
T Consensus 151 V~~~~~---------~~~---------------~~~~~~~~~~~~L----kpgG~l~i~~ 182 (233)
T 2ipx_A 151 IFADVA---------QPD---------------QTRIVALNAHTFL----RNGGHFVISI 182 (233)
T ss_dssp EEECCC---------CTT---------------HHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred EEEcCC---------Ccc---------------HHHHHHHHHHHHc----CCCeEEEEEE
Confidence 999987 111 1234566777775 9999998854
No 99
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.28 E-value=8.1e-12 Score=114.24 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=83.8
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccC-----CceEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCcccc
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKN-----TGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELPKV 244 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~-----~g~V~a~D~~~~rl~~l~~n~~r~g-----~~~v~~~~~D~~~~~~~ 244 (384)
.++++.+|||+|||+|..+..+++..+. .+.|+++|+++.+++.+++++.+.| ..++.+..+|+.....
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~- 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP- 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-
Confidence 4678999999999999999999997753 3689999999999999999999887 6789999999876321
Q ss_pred cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 245 ~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
..+.||+|++++++.. ++..+.+.| ||||+++.++-
T Consensus 160 -~~~~fD~I~~~~~~~~----------------------------~~~~~~~~L----kpgG~lvi~~~ 195 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAPD----------------------------TPTELINQL----ASGGRLIVPVG 195 (227)
T ss_dssp -GGCSEEEEEECSCBSS----------------------------CCHHHHHTE----EEEEEEEEEES
T ss_pred -cCCCccEEEECCchHH----------------------------HHHHHHHHh----cCCCEEEEEEe
Confidence 1268999999887521 113455664 99999998764
No 100
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.28 E-value=8.4e-12 Score=115.92 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=89.2
Q ss_pred CCCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHc---CCce----------------------
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRM---GVTN---------------------- 230 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~---g~~~---------------------- 230 (384)
.++.+|||+|||+|..+..++..+ .....|+|+|+|+.+++.+++|+... |+.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 467899999999999999998873 12368999999999999999999877 6533
Q ss_pred ----EE-------------EEecCCCCcccc---cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHH
Q 016730 231 ----TI-------------VCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQL 290 (384)
Q Consensus 231 ----v~-------------~~~~D~~~~~~~---~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~i 290 (384)
+. +.++|+...... .....||+|++|||+.....+.+. .....+..+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~-------------~~~~~~~~~ 196 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ-------------VPGQPVAGL 196 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSC-------------CCHHHHHHH
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccccc-------------ccccHHHHH
Confidence 55 888998764311 023489999999996443322110 112345678
Q ss_pred HHHHHHchhccCCCCcEEEEEeccC
Q 016730 291 ILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 291 L~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+..+.++| ||||+++++.++.
T Consensus 197 l~~~~~~L----kpgG~l~~~~~~~ 217 (250)
T 1o9g_A 197 LRSLASAL----PAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHS----CTTCEEEEEESSS
T ss_pred HHHHHHhc----CCCcEEEEeCcch
Confidence 88888885 9999999966553
No 101
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=9.2e-13 Score=126.53 Aligned_cols=129 Identities=16% Similarity=0.091 Sum_probs=93.4
Q ss_pred EEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 016730 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (384)
Q Consensus 160 ~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~ 239 (384)
|.++......++..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+.+++.+++++...|..++.++++|+.
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 4445544555667778889999999999999999988875 3689999999999999999999888888999999998
Q ss_pred CcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHH-----------HHHHHHHHHHHchhccCCCCcEE
Q 016730 240 ELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY-----------LQKQLILAAIDMVDANSKSGGYI 308 (384)
Q Consensus 240 ~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~-----------~Q~~iL~~a~~~L~~~lkpGG~l 308 (384)
.++. ..||+|++|+|+..+ ...+..+.. .|+ +.+.+++ +++|..
T Consensus 101 ~~~~----~~~D~Vv~n~py~~~--------------~~~~~~ll~~~~~~~~~~l~~Q~---e~a~rll----a~~G~~ 155 (299)
T 2h1r_A 101 KTVF----PKFDVCTANIPYKIS--------------SPLIFKLISHRPLFKCAVLMFQK---EFAERML----ANVGDS 155 (299)
T ss_dssp SSCC----CCCSEEEEECCGGGH--------------HHHHHHHHHCSSCCSEEEEEEEH---HHHHHHT----CCTTST
T ss_pred hCCc----ccCCEEEEcCCcccc--------------cHHHHHHHhcCCccceeeehHHH---HHHHHHh----cCCCCc
Confidence 7652 579999999996432 111111111 011 3355554 999999
Q ss_pred EEEeccCC
Q 016730 309 VYSTCSIM 316 (384)
Q Consensus 309 vYsTCSi~ 316 (384)
.|+|||+.
T Consensus 156 ~y~~ls~~ 163 (299)
T 2h1r_A 156 NYSRLTIN 163 (299)
T ss_dssp TCCHHHHH
T ss_pred chhHHHHH
Confidence 99998863
No 102
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=3.8e-11 Score=111.93 Aligned_cols=126 Identities=11% Similarity=0.154 Sum_probs=98.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+++|++|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ +.+..+|+...... +..||.|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--~~~~D~Iv 95 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--KDAIDTIV 95 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc--cccccEEE
Confidence 4678999999999999999988863 34689999999999999999999999976 99999998765421 13699988
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~ 334 (384)
+ .|.| ..+-.+||..+...| +++|+||.+.- .+.+.|...|...+|.
T Consensus 96 i----agmG--------------------g~lI~~IL~~~~~~L----~~~~~lIlq~~-----~~~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 96 I----AGMG--------------------GTLIRTILEEGAAKL----AGVTKLILQPN-----IAAWQLREWSEQNNWL 142 (244)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHHTEE
T ss_pred E----eCCc--------------------hHHHHHHHHHHHHHh----CCCCEEEEEcC-----CChHHHHHHHHHCCCE
Confidence 6 2333 123356888888876 99999998763 3677777777777877
Q ss_pred Eee
Q 016730 335 LVP 337 (384)
Q Consensus 335 l~~ 337 (384)
++.
T Consensus 143 i~~ 145 (244)
T 3gnl_A 143 ITS 145 (244)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 103
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=1.4e-11 Score=112.51 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=85.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~Vl 254 (384)
+.+|++|||+|||+|..+..+++..+..+.|+++|+++.+++.+++++++. .++.++.+|+...... ...+.||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 678999999999999999999998765579999999999999999998765 6789999999874311 1125799999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+|+| .|+ ....++..+.++| ||||+++++.+
T Consensus 149 ~~~~---------~~~---------------~~~~~l~~~~~~L----kpgG~l~~~~~ 179 (227)
T 1g8a_A 149 EDVA---------QPT---------------QAKILIDNAEVYL----KRGGYGMIAVK 179 (227)
T ss_dssp ECCC---------STT---------------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred ECCC---------CHh---------------HHHHHHHHHHHhc----CCCCEEEEEEe
Confidence 9987 111 1123477788886 99999998743
No 104
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.27 E-value=2.8e-12 Score=118.25 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=92.4
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCccccc--
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVL-- 245 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~-- 245 (384)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++++.|+. ++.+..+|+......+
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~ 142 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ 142 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 3333444456789999999999999999998865689999999999999999999999986 4889899876532111
Q ss_pred CC--CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 246 GL--NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 246 ~~--~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
.. +.||.|++|++. + ....++..+.++| +|||+|++..+...
T Consensus 143 ~~~~~~fD~V~~d~~~---------~----------------~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 143 GKPLPEFDLIFIDADK---------R----------------NYPRYYEIGLNLL----RRGGLMVIDNVLWH 186 (232)
T ss_dssp SSSCCCEEEEEECSCG---------G----------------GHHHHHHHHHHTE----EEEEEEEEECTTGG
T ss_pred cCCCCCcCEEEECCCH---------H----------------HHHHHHHHHHHHc----CCCeEEEEeCCCcC
Confidence 11 579999999761 0 1234677888886 99999999887764
No 105
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.26 E-value=1.5e-12 Score=120.74 Aligned_cols=131 Identities=13% Similarity=0.138 Sum_probs=94.7
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHH---ccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc--ccccC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAAL---MKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL--PKVLG 246 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~---~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~--~~~~~ 246 (384)
.++...++.+|||+|||+|+.|..+++. +.+.++|+++|+++.+++.++ .++ .++.++++|+... .....
T Consensus 75 ~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 75 DMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp HHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGGGGGS
T ss_pred HHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHHHhhc
Confidence 3444456789999999999999999998 455689999999999988776 122 5799999999875 12222
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHH-chhccCCCCcEEEEEe-ccCCccccHHHH
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYST-CSIMVTENEAVI 324 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~-~L~~~lkpGG~lvYsT-CSi~~~ENe~vv 324 (384)
..+||.|++|+. |. + ..++|..+.+ .| ||||+|++.. |.+.+..+++.+
T Consensus 150 ~~~fD~I~~d~~---------~~---------~-------~~~~l~~~~r~~L----kpGG~lv~~d~~~~~~~~~~~~~ 200 (236)
T 2bm8_A 150 EMAHPLIFIDNA---------HA---------N-------TFNIMKWAVDHLL----EEGDYFIIEDMIPYWYRYAPQLF 200 (236)
T ss_dssp SSCSSEEEEESS---------CS---------S-------HHHHHHHHHHHTC----CTTCEEEECSCHHHHHHHCHHHH
T ss_pred cCCCCEEEECCc---------hH---------h-------HHHHHHHHHHhhC----CCCCEEEEEeCcccccccCHHHH
Confidence 247999999875 11 0 1346777775 75 9999999864 445556677777
Q ss_pred HHHHhcC--CCEEe
Q 016730 325 DYALKKR--DVKLV 336 (384)
Q Consensus 325 ~~~l~~~--~~~l~ 336 (384)
..+++.. +++++
T Consensus 201 ~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 201 SEYLGAFRDVLSMD 214 (236)
T ss_dssp HHHHHTTTTTEEEE
T ss_pred HHHHHhCcccEEEc
Confidence 7777765 56554
No 106
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.26 E-value=1.1e-11 Score=109.00 Aligned_cols=114 Identities=18% Similarity=0.156 Sum_probs=84.2
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCccccc--CCCCCCEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL--GLNTVDRV 253 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~--~~~~fD~V 253 (384)
.++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++|+...|+ .++.++++|+....... ..+.||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLV 120 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEE
Confidence 57889999999999999987773 346899999999999999999999998 47999999987643211 13689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++|+|.. . ...... .. .+. +.++ |||||++++++|+-..
T Consensus 121 ~~~~~~~-~------------~~~~~~------~~-~l~-~~~~----L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 121 LLDPPYA-K------------QEIVSQ------LE-KML-ERQL----LTNEAVIVCETDKTVK 159 (187)
T ss_dssp EECCCGG-G------------CCHHHH------HH-HHH-HTTC----EEEEEEEEEEEETTCC
T ss_pred EECCCCC-c------------hhHHHH------HH-HHH-Hhcc----cCCCCEEEEEeCCccc
Confidence 9999831 0 011111 01 111 2555 4999999999887644
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.26 E-value=2.5e-11 Score=111.45 Aligned_cols=106 Identities=21% Similarity=0.288 Sum_probs=83.6
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc--ccCCCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--VLGLNTVD 251 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~--~~~~~~fD 251 (384)
+.+.++.+|||+|||+|..+.++++..+ .+.|+|+|+++.+++.++++++.. .++.++.+|+..... ... +.||
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC-ccEE
Confidence 3467899999999999999999999876 579999999999999999998765 688998999987221 122 6799
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+|+.|.|- |+ ....++..+.+.| ||||+++.+
T Consensus 146 ~v~~~~~~---------~~---------------~~~~~l~~~~~~L----kpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQ---------PN---------------QAEILIKNAKWFL----KKGGYGMIA 177 (230)
T ss_dssp EEEECCCS---------TT---------------HHHHHHHHHHHHE----EEEEEEEEE
T ss_pred EEEEecCC---------hh---------------HHHHHHHHHHHhC----CCCcEEEEE
Confidence 99987651 11 1134577888776 999999886
No 108
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.25 E-value=1.2e-12 Score=119.58 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=90.5
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCccccc--CC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL--GL 247 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~--~~ 247 (384)
..++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++++.|+ .++.++.+|+....... .+
T Consensus 62 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 62 ANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence 3444456788999999999999999998876568999999999999999999999998 47899999886542111 11
Q ss_pred --CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 248 --NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 248 --~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
++||.|++|+|. ..+..++..+.++| +|||.++...+.
T Consensus 142 ~~~~~D~v~~d~~~-------------------------~~~~~~l~~~~~~L----~pgG~lv~~~~~ 181 (229)
T 2avd_A 142 EAGTFDVAVVDADK-------------------------ENCSAYYERCLQLL----RPGGILAVLRVL 181 (229)
T ss_dssp CTTCEEEEEECSCS-------------------------TTHHHHHHHHHHHE----EEEEEEEEECCS
T ss_pred CCCCccEEEECCCH-------------------------HHHHHHHHHHHHHc----CCCeEEEEECCC
Confidence 579999999871 01234677788876 999999987654
No 109
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=2.7e-11 Score=109.33 Aligned_cols=112 Identities=20% Similarity=0.233 Sum_probs=88.1
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
.....+.+.++.+|||+|||+|..+..++...+..+.|+++|+++.+++.+++++...|+.++.+...|+..... ..+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~ 145 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE--PLA 145 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG--GGC
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC--CCC
Confidence 344556778899999999999999999999875447999999999999999999999999889999998754322 136
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.||+|+++.++... + ..+.+.| ||||+++.++.+
T Consensus 146 ~fD~v~~~~~~~~~------~----------------------~~~~~~L----~pgG~lv~~~~~ 179 (215)
T 2yxe_A 146 PYDRIYTTAAGPKI------P----------------------EPLIRQL----KDGGKLLMPVGR 179 (215)
T ss_dssp CEEEEEESSBBSSC------C----------------------HHHHHTE----EEEEEEEEEESS
T ss_pred CeeEEEECCchHHH------H----------------------HHHHHHc----CCCcEEEEEECC
Confidence 89999998763211 0 2445664 999999987643
No 110
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=4.3e-11 Score=110.15 Aligned_cols=108 Identities=13% Similarity=0.217 Sum_probs=87.7
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~f 250 (384)
..+++.+|++|||+|||+|..+..++.. .+.|+++|+++.+++.++++++..|+ .++.+...|+.... ...+.|
T Consensus 85 ~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 159 (248)
T 2yvl_A 85 LKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE--VPEGIF 159 (248)
T ss_dssp HHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC--CCTTCB
T ss_pred HhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc--cCCCcc
Confidence 3455678999999999999999999887 37999999999999999999999998 67899899987743 123689
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|.|++|+| +| ..++..+.++| +|||+++..+.+.
T Consensus 160 D~v~~~~~---------~~------------------~~~l~~~~~~L----~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 160 HAAFVDVR---------EP------------------WHYLEKVHKSL----MEGAPVGFLLPTA 193 (248)
T ss_dssp SEEEECSS---------CG------------------GGGHHHHHHHB----CTTCEEEEEESSH
T ss_pred cEEEECCc---------CH------------------HHHHHHHHHHc----CCCCEEEEEeCCH
Confidence 99999877 11 13467777775 9999999877543
No 111
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.25 E-value=5.9e-12 Score=127.34 Aligned_cols=163 Identities=20% Similarity=0.162 Sum_probs=114.6
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHcc------------CCceEEEEeCCHHHHHHHHHHHH
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMK------------NTGLIYANEMKASRLKSLTANLH 224 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~------------~~g~V~a~D~~~~rl~~l~~n~~ 224 (384)
.|.|+--..-+.+.+.++.+.++.+|||.|||+|+....++..+. ....++|+|+++..++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 344443333344566777888999999999999999998887652 12579999999999999999999
Q ss_pred HcCCc--eEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCC---chhhccCCHHHHHHHHHHHHHHHHHHHHchh
Q 016730 225 RMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKD---ESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (384)
Q Consensus 225 r~g~~--~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~---p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~ 299 (384)
..|+. ++.+.++|+...+.. .+||+|+.+||+++....... .+..+..+ ..+..++.++++.|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~---~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~--------~~~~~fl~~~~~~L- 297 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS---TLVDVILANPPFGTRPAGSVDINRPDFYVETK--------NNQLNFLQHMMLML- 297 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS---SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCS--------CHHHHHHHHHHHHE-
T ss_pred HhCCCcCCCCEeeCCCCCCccc---CCcCEEEECCCCCCcccccchhhHhhcCCCCc--------chHHHHHHHHHHHh-
Confidence 99986 677888998765432 489999999999886543221 11111111 12456888888886
Q ss_pred ccCCCCcEEEEEecc--CCccccHHHHH-HHHhcCCCE
Q 016730 300 ANSKSGGYIVYSTCS--IMVTENEAVID-YALKKRDVK 334 (384)
Q Consensus 300 ~~lkpGG~lvYsTCS--i~~~ENe~vv~-~~l~~~~~~ 334 (384)
||||++++.++. ++....+..+. +++++..++
T Consensus 298 ---k~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~ 332 (445)
T 2okc_A 298 ---KTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLH 332 (445)
T ss_dssp ---EEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEE
T ss_pred ---ccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEE
Confidence 999999998864 23322334444 677665443
No 112
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.25 E-value=5.9e-11 Score=119.41 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=69.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+.++++|||+|||+|..+..++.. ...|+|+|+++.+++.+++|++.+|++ +.+..+|+..+.. ..||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~----~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV----KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC----TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc----cCCCEEEE
Confidence 567899999999999999998875 358999999999999999999999998 9999999987642 27999999
Q ss_pred cCCCCCC
Q 016730 256 DAPCSGT 262 (384)
Q Consensus 256 DaPCSg~ 262 (384)
|||.+|.
T Consensus 360 dPPr~g~ 366 (425)
T 2jjq_A 360 DPPRAGL 366 (425)
T ss_dssp CCCTTCS
T ss_pred cCCccch
Confidence 9997554
No 113
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.25 E-value=2.8e-11 Score=107.40 Aligned_cols=124 Identities=19% Similarity=0.189 Sum_probs=86.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCC--------ceEEEEeCCHHHHHHHHHHHHHcCCceEEEE-ecCCCCccc---
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNT--------GLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPK--- 243 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~--------g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~-~~D~~~~~~--- 243 (384)
+++|.+|||+|||+|..+..+++.++.. +.|+++|+++.+ ++.++.++ .+|......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 5679999999999999999999987643 799999999842 34567788 888776431
Q ss_pred ---ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcccc
Q 016730 244 ---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN 320 (384)
Q Consensus 244 ---~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~EN 320 (384)
...+++||+|++|.++..+|.. ..+.......+..++..+.++| ||||+++.+++.- .+.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~~~~~~--~~~ 151 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFR-----------DLDHDRLISLCLTLLSVTPDIL----QPGGTFLCKTWAG--SQS 151 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEECCS--GGG
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHh----cCCCEEEEEecCC--ccH
Confidence 1223589999999876555531 1112223345567888888886 9999999877533 333
Q ss_pred HHHHHHH
Q 016730 321 EAVIDYA 327 (384)
Q Consensus 321 e~vv~~~ 327 (384)
+++...+
T Consensus 152 ~~~~~~l 158 (196)
T 2nyu_A 152 RRLQRRL 158 (196)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 114
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=114.27 Aligned_cols=119 Identities=15% Similarity=0.214 Sum_probs=86.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHH------cCCceEEEEecCCCC-cccccCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------MGVTNTIVCNYDGNE-LPKVLGLN 248 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r------~g~~~v~~~~~D~~~-~~~~~~~~ 248 (384)
..++.+|||+|||+|..+..+|...+ ...|+|+|+++.+++.++++++. .+..|+.++.+|+.. ++..+..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 34678999999999999999988764 36899999999999999998875 467889999999987 44334457
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.||.|++.-|. |..+. .....+ -.+..+|..+.++| ||||.|+.+|+
T Consensus 123 ~~D~v~~~~~d---------p~~k~---~h~krr--~~~~~~l~~~~~~L----kpGG~l~~~td 169 (235)
T 3ckk_A 123 QLTKMFFLFPD---------PHFKR---TKHKWR--IISPTLLAEYAYVL----RVGGLVYTITD 169 (235)
T ss_dssp CEEEEEEESCC-------------------------CCCHHHHHHHHHHE----EEEEEEEEEES
T ss_pred CeeEEEEeCCC---------chhhh---hhhhhh--hhhHHHHHHHHHHC----CCCCEEEEEeC
Confidence 89999986552 21110 000000 01346788888876 99999999886
No 115
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.24 E-value=9.7e-11 Score=105.97 Aligned_cols=117 Identities=13% Similarity=0.065 Sum_probs=86.9
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCccccc
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVL 245 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-----~v~~~~~D~~~~~~~~ 245 (384)
...+...++.+|||+|||+|..+..+++..+ ...|+++|+|+..++.+++++...++. ++.+..+|+...+..
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 99 (219)
T 3jwg_A 22 VAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR- 99 (219)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG-
T ss_pred HHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc-
Confidence 3444556788999999999999998887653 368999999999999999999887765 689999998665432
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.++||.|++... + ......+ ..++|..+.+.| ||||.++.+.++
T Consensus 100 -~~~fD~V~~~~~------l-------~~~~~~~-------~~~~l~~~~~~L----kpgG~~i~~~~~ 143 (219)
T 3jwg_A 100 -FSGYDAATVIEV------I-------EHLDENR-------LQAFEKVLFEFT----RPQTVIVSTPNK 143 (219)
T ss_dssp -GTTCSEEEEESC------G-------GGCCHHH-------HHHHHHHHHTTT----CCSEEEEEEEBG
T ss_pred -cCCCCEEEEHHH------H-------HhCCHHH-------HHHHHHHHHHhh----CCCEEEEEccch
Confidence 368999997432 1 1112221 245778888875 999977766554
No 116
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.24 E-value=1e-10 Score=106.72 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=87.5
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++..+ ...|+++|+|+..++.+++++...+ ++.++.+|+..++.. +.||.|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~---~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE---EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC---SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC---CCceEEEE
Confidence 56789999999999999999999874 3799999999999999999887665 789999999887642 68999998
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
... + . .....+ ..++|..+.++| ||||+++.++....
T Consensus 116 ~~~------l------~-~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 116 ALS------I------H-HLEDED-------KKELYKRSYSIL----KESGIFINADLVHG 152 (234)
T ss_dssp ESC------G------G-GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEECBC
T ss_pred eCc------c------c-cCCHHH-------HHHHHHHHHHhc----CCCcEEEEEEecCC
Confidence 643 1 1 112111 235788888886 99999999886553
No 117
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=7.5e-12 Score=108.26 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=83.1
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--CCCCCCEEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDRVLL 255 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--~~~~fD~Vll 255 (384)
++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.+++|+...++ ++.+.++|+....... ..++||.|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 78899999999999999888863 2499999999999999999999998 8899999987642211 1247999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHH--HHchhccCCCCcEEEEEeccCCccc
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA--IDMVDANSKSGGYIVYSTCSIMVTE 319 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a--~~~L~~~lkpGG~lvYsTCSi~~~E 319 (384)
|+|.. +. .+ +++... .++ |||||+++.++++....+
T Consensus 117 ~~~~~--~~---~~-------------------~~~~~~~~~~~----L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 117 APPYA--MD---LA-------------------ALFGELLASGL----VEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp CCCTT--SC---TT-------------------HHHHHHHHHTC----EEEEEEEEEEEETTSCCT
T ss_pred CCCCc--hh---HH-------------------HHHHHHHhhcc----cCCCcEEEEEeCCccCCc
Confidence 99964 21 00 122222 355 499999999887765433
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.24 E-value=4.1e-11 Score=118.93 Aligned_cols=115 Identities=16% Similarity=0.184 Sum_probs=92.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.+|.+|||+|||+|..+..++.. ...|+++|+|+..++.+++|+..+|+. +.++.+|+...... .++||.|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~--~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTE--EARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCT--TCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcccc--CCCeEEEEEC
Confidence 47889999999999999999886 359999999999999999999999986 78889999876532 3689999999
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ 318 (384)
+|+...+... .....+++..+.+.| ||||++++++++..+.
T Consensus 306 pp~~~~~~~~-----------------~~~~~~~l~~~~~~L----kpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 306 PPFHVGGAVI-----------------LDVAQAFVNVAAARL----RPGGVFFLVSNPFLKY 346 (381)
T ss_dssp CCCCTTCSSC-----------------CHHHHHHHHHHHHHE----EEEEEEEEEECTTSCH
T ss_pred Cchhhccccc-----------------HHHHHHHHHHHHHhc----CcCcEEEEEEcCCCCh
Confidence 9975432211 012356788888886 9999999998877643
No 119
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.23 E-value=2.6e-11 Score=111.50 Aligned_cols=122 Identities=19% Similarity=0.191 Sum_probs=91.0
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~ 236 (384)
.|....+......+...+.+.++.+|||+|||+|..+..+++..+ +.|+++|+++.+++.++++++..|+.++.+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp TTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 444444433333445566788999999999999999999999875 689999999999999999999999988999999
Q ss_pred CCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 237 DGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 237 D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
|+.... .....||+|+++.+.... ...+.+.| ||||+++.++-.
T Consensus 148 d~~~~~--~~~~~fD~Ii~~~~~~~~----------------------------~~~~~~~L----~pgG~lvi~~~~ 191 (235)
T 1jg1_A 148 DGSKGF--PPKAPYDVIIVTAGAPKI----------------------------PEPLIEQL----KIGGKLIIPVGS 191 (235)
T ss_dssp CGGGCC--GGGCCEEEEEECSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECS
T ss_pred CcccCC--CCCCCccEEEECCcHHHH----------------------------HHHHHHhc----CCCcEEEEEEec
Confidence 973211 112469999998763211 11345554 999999987653
No 120
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.23 E-value=1.4e-10 Score=104.65 Aligned_cols=113 Identities=12% Similarity=0.178 Sum_probs=86.8
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
+....+...++.+|||+|||+|..+..+++.. ..|+++|+++..++.+++++...+ ++.+..+|+..++. .+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~---~~ 113 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST---AE 113 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC---SC
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC---CC
Confidence 34445666788999999999999999887763 589999999999999999987654 78999999988762 37
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+||.|++... + .+...+.. ..++|..+.++| ||||.+++++
T Consensus 114 ~fD~v~~~~~------l------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~ 154 (216)
T 3ofk_A 114 LFDLIVVAEV------L------YYLEDMTQ-------MRTAIDNMVKML----APGGHLVFGS 154 (216)
T ss_dssp CEEEEEEESC------G------GGSSSHHH-------HHHHHHHHHHTE----EEEEEEEEEE
T ss_pred CccEEEEccH------H------HhCCCHHH-------HHHHHHHHHHHc----CCCCEEEEEe
Confidence 8999998532 1 11222222 245778888886 9999999986
No 121
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.23 E-value=7.5e-12 Score=120.38 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=77.2
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccC---
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--- 246 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~--- 246 (384)
+...|++++|.+|||+|||+|+.|..+++..+ .+.|+|+|+|+.+++.+++|++.+| .++.++++|+..++..+.
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g 95 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLG 95 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTT
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcC
Confidence 34567788999999999999999999999876 4799999999999999999999988 789999999887653221
Q ss_pred CCCCCEEEEcCCCCC
Q 016730 247 LNTVDRVLLDAPCSG 261 (384)
Q Consensus 247 ~~~fD~VllDaPCSg 261 (384)
...||.|++|+|||.
T Consensus 96 ~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 96 IEKVDGILMDLGVST 110 (301)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCCCEEEEcCccch
Confidence 147999999999984
No 122
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=8.4e-12 Score=115.47 Aligned_cols=113 Identities=13% Similarity=0.084 Sum_probs=86.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..+|.+|||+|||+|..+.++++..+ ..|+++|+|+..++.++++.+..+. ++.++.+|+......+..+.||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccccccCCceEEE
Confidence 46799999999999999988877543 5799999999999999999888775 57777888876654455678999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
|+..+..... + ......++.++.++| ||||+|+|.+
T Consensus 135 D~~~~~~~~~-~----------------~~~~~~~~~e~~rvL----kPGG~l~f~~ 170 (236)
T 3orh_A 135 DTYPLSEETW-H----------------THQFNFIKNHAFRLL----KPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGT-T----------------THHHHHHHHTHHHHE----EEEEEEEECC
T ss_pred eeeecccchh-h----------------hcchhhhhhhhhhee----CCCCEEEEEe
Confidence 9864332211 0 012345677888876 9999999854
No 123
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.22 E-value=4.5e-11 Score=111.78 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=96.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..++.+ + ..|+++|+|+.+++.+++|+.++|+. +.+..+|+... +..++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g-~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~---~~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--G-GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA---LPFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--T-CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH---GGGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--C-CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc---CcCCCCCEEEE
Confidence 467899999999999999887774 2 28999999999999999999999987 88888887652 12368999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEE
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l 335 (384)
+.+. .....++..+.++| ||||+++.+.... +..+.+...+++.++++
T Consensus 191 n~~~-------------------------~~~~~~l~~~~~~L----kpgG~lils~~~~---~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 191 NLYA-------------------------ELHAALAPRYREAL----VPGGRALLTGILK---DRAPLVREAMAGAGFRP 238 (254)
T ss_dssp ECCH-------------------------HHHHHHHHHHHHHE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTCEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHHc----CCCCEEEEEeecc---CCHHHHHHHHHHCCCEE
Confidence 7651 01245777788875 9999999976543 45666677778888887
Q ss_pred eec
Q 016730 336 VPC 338 (384)
Q Consensus 336 ~~~ 338 (384)
+..
T Consensus 239 ~~~ 241 (254)
T 2nxc_A 239 LEE 241 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 124
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.22 E-value=8.7e-11 Score=104.02 Aligned_cols=114 Identities=18% Similarity=0.098 Sum_probs=88.8
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
.....+...++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++...++.++.+...|+..++. .+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC---CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC---CC
Confidence 3445566667889999999999999988886 35899999999999999999999998889999999887653 37
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.||.|++..+. . ...+++ ..+++..+.+.| ||||++++.+
T Consensus 97 ~~D~v~~~~~l------~-------~~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~ 136 (199)
T 2xvm_A 97 QYDFILSTVVL------M-------FLEAKT-------IPGLIANMQRCT----KPGGYNLIVA 136 (199)
T ss_dssp CEEEEEEESCG------G-------GSCGGG-------HHHHHHHHHHTE----EEEEEEEEEE
T ss_pred CceEEEEcchh------h-------hCCHHH-------HHHHHHHHHHhc----CCCeEEEEEE
Confidence 89999986431 1 111111 245778888876 9999987654
No 125
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.22 E-value=9.7e-11 Score=108.48 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=101.0
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~f 250 (384)
...+.+.++.+|||+|||+|..+..++... ...|+++|+|+.+++.+++++... .++.+..+|+..++. ..++|
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~--~~~~f 121 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF--PENNF 121 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC--CTTCE
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC--CCCcE
Confidence 344567789999999999999999999876 368999999999999999887654 678999999988752 34789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc-------------
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV------------- 317 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~------------- 317 (384)
|+|++... + ...... ....+|..+.++| ||||+++.++.+...
T Consensus 122 D~v~~~~~------l-------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 177 (266)
T 3ujc_A 122 DLIYSRDA------I-------LALSLE-------NKNKLFQKCYKWL----KPTGTLLITDYCATEKENWDDEFKEYVK 177 (266)
T ss_dssp EEEEEESC------G-------GGSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEEESCGGGCCHHHHHHHH
T ss_pred EEEeHHHH------H-------HhcChH-------HHHHHHHHHHHHc----CCCCEEEEEEeccCCcccchHHHHHHHh
Confidence 99998532 1 111212 2346788888886 999999998754332
Q ss_pred -----cccHHHHHHHHhcCCCEEeec
Q 016730 318 -----TENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 318 -----~ENe~vv~~~l~~~~~~l~~~ 338 (384)
--..+.+..+++..|++.+..
T Consensus 178 ~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 178 QRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp HHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 113445556667778776653
No 126
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=2.4e-10 Score=107.79 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=88.0
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~ 249 (384)
...+.+.+|.+|||+|||+|..+..+++..+ ..|+++|+|+..++.+++++...|+. ++.+...|+..++ ++
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 129 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-----EP 129 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-----CC
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-----CC
Confidence 3445677899999999999999999997653 48999999999999999999988874 6889899987654 68
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
||+|++.- ++..- ... ....+|..+.++| ||||+++.++...
T Consensus 130 fD~v~~~~------~l~~~-------~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~ 171 (287)
T 1kpg_A 130 VDRIVSIG------AFEHF-------GHE-------RYDAFFSLAHRLL----PADGVMLLHTITG 171 (287)
T ss_dssp CSEEEEES------CGGGT-------CTT-------THHHHHHHHHHHS----CTTCEEEEEEEEE
T ss_pred eeEEEEeC------chhhc-------ChH-------HHHHHHHHHHHhc----CCCCEEEEEEecC
Confidence 99999742 11111 001 1245778888875 9999999987664
No 127
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.20 E-value=5.5e-11 Score=102.50 Aligned_cols=113 Identities=22% Similarity=0.266 Sum_probs=85.1
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc------ccCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK------VLGLNT 249 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~------~~~~~~ 249 (384)
++++.+|||+|||+|..+..+++.++....|+++|+++ ++. +.++.+...|+...+. ....++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCCCCc
Confidence 56889999999999999999999875457999999998 542 2578888999987541 133468
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
||.|++|+|+...|.. ..+.......+..++..+.++| +|||.++.++..
T Consensus 89 ~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L----~~gG~l~~~~~~ 138 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVL----APGGSFVVKVFQ 138 (180)
T ss_dssp EEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEEES
T ss_pred eeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHc----CCCcEEEEEEec
Confidence 9999999998766631 1122233445578888888886 999999976643
No 128
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.20 E-value=1.4e-11 Score=113.72 Aligned_cols=118 Identities=14% Similarity=0.195 Sum_probs=91.5
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCc-ccc--
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNEL-PKV-- 244 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~-~~~-- 244 (384)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++++++.|+.+ +.+..+|+... +..
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 130 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLID 130 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHh
Confidence 34444555678999999999999999999988656899999999999999999999999976 89999987653 211
Q ss_pred ----------cC-C-CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 245 ----------LG-L-NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 245 ----------~~-~-~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+. . +.||.|++|+.. .. ...++..+.++| ||||++++.+
T Consensus 131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~------------------~~-------~~~~l~~~~~~L----~pgG~lv~~~ 181 (239)
T 2hnk_A 131 SKSAPSWASDFAFGPSSIDLFFLDADK------------------EN-------YPNYYPLILKLL----KPGGLLIADN 181 (239)
T ss_dssp CSSCCGGGTTTCCSTTCEEEEEECSCG------------------GG-------HHHHHHHHHHHE----EEEEEEEEEC
T ss_pred hcccccccccccCCCCCcCEEEEeCCH------------------HH-------HHHHHHHHHHHc----CCCeEEEEEc
Confidence 11 1 679999998530 01 124577777876 9999999987
Q ss_pred ccC
Q 016730 313 CSI 315 (384)
Q Consensus 313 CSi 315 (384)
+..
T Consensus 182 ~~~ 184 (239)
T 2hnk_A 182 VLW 184 (239)
T ss_dssp SSG
T ss_pred ccc
Confidence 644
No 129
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.19 E-value=4e-10 Score=105.26 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=90.3
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~ 249 (384)
...+.+.++.+|||+|||+|..+..+++.. ...|+++|+|+..++.+++++...|+. ++.+..+|+..++ +..++
T Consensus 54 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 129 (273)
T 3bus_A 54 IALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP--FEDAS 129 (273)
T ss_dssp HHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--SCTTC
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC--CCCCC
Confidence 344567789999999999999999998875 369999999999999999999999985 5899999998865 23478
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
||+|++... +..-+ .+ ..+|..+.++| ||||+++.++...
T Consensus 130 fD~v~~~~~------l~~~~------~~----------~~~l~~~~~~L----~pgG~l~i~~~~~ 169 (273)
T 3bus_A 130 FDAVWALES------LHHMP------DR----------GRALREMARVL----RPGGTVAIADFVL 169 (273)
T ss_dssp EEEEEEESC------TTTSS------CH----------HHHHHHHHTTE----EEEEEEEEEEEEE
T ss_pred ccEEEEech------hhhCC------CH----------HHHHHHHHHHc----CCCeEEEEEEeec
Confidence 999997432 11111 11 35778888876 9999999887653
No 130
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.19 E-value=2.8e-10 Score=103.25 Aligned_cols=112 Identities=12% Similarity=0.200 Sum_probs=86.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-----eEEEEecCCCCcccccCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-----~v~~~~~D~~~~~~~~~~~~f 250 (384)
++++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++...++. ++.+...|+..++. ..+.|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~ 102 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF--HDSSF 102 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS--CTTCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC--CCCce
Confidence 357889999999999999988886 358999999999999999999888873 67888999987652 34789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|.|++... + .+...+.. ..++|..+.++| ||||+++.++...
T Consensus 103 D~v~~~~~------l------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 103 DFAVMQAF------L------TSVPDPKE-------RSRIIKEVFRVL----KPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEEESC------G------GGCCCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEBC
T ss_pred eEEEEcch------h------hcCCCHHH-------HHHHHHHHHHHc----CCCeEEEEEECCc
Confidence 99998643 1 11112222 235778888876 9999999987654
No 131
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.19 E-value=1.3e-11 Score=117.59 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=74.3
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCccccc
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVL 245 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~ 245 (384)
....+..+++.++++|||+|||+|..|..+++.. +.|+|+|+|+.+++.+++++...|. .++.++++|+..++.
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-- 91 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-- 91 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--
Confidence 3345566778889999999999999999999873 5899999999999999999988776 579999999987642
Q ss_pred CCCCCCEEEEcCCCCC
Q 016730 246 GLNTVDRVLLDAPCSG 261 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg 261 (384)
..||.|++++|+..
T Consensus 92 --~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 --PFFDTCVANLPYQI 105 (285)
T ss_dssp --CCCSEEEEECCGGG
T ss_pred --hhhcEEEEecCccc
Confidence 47999999999643
No 132
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.19 E-value=5.9e-11 Score=106.34 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=85.0
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..++...+ ...|+++|+++.+++.++++++..|+.++.+..+|+..++. .++||.|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS---EPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC---CSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc---cCCcCEEEEec
Confidence 478999999999999999998865 37999999999999999999999999889999999987652 26899999742
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
- . . ...++..+.++| +|||+++.....
T Consensus 141 ~--------~--------~----------~~~~l~~~~~~L----~~gG~l~~~~~~ 167 (207)
T 1jsx_A 141 F--------A--------S----------LNDMVSWCHHLP----GEQGRFYALKGQ 167 (207)
T ss_dssp S--------S--------S----------HHHHHHHHTTSE----EEEEEEEEEESS
T ss_pred c--------C--------C----------HHHHHHHHHHhc----CCCcEEEEEeCC
Confidence 1 0 0 235778888875 999999987654
No 133
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.19 E-value=7e-10 Score=97.37 Aligned_cols=129 Identities=6% Similarity=-0.022 Sum_probs=94.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+.++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++ .++.+...|+..++. ..+.||.|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~--~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI--SETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC--CCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC--CCCceeEEEE
Confidence 457889999999999999988876 358999999999999998875 346788889887642 2468999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEE
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l 335 (384)
++++ .......+ ..++|..+.+.| +|||++++++.+... -....+...++..++++
T Consensus 114 ~~~~------------~~~~~~~~-------~~~~l~~~~~~l----~~~G~l~~~~~~~~~-~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 114 AGNV------------MGFLAEDG-------REPALANIHRAL----GADGRAVIGFGAGRG-WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp CCCC------------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEETTSS-CCHHHHHHHHHHHTEEE
T ss_pred CCcH------------HhhcChHH-------HHHHHHHHHHHh----CCCCEEEEEeCCCCC-cCHHHHHHHHHHcCCEE
Confidence 7542 11112221 356788888886 999999987755432 34555666777778887
Q ss_pred eec
Q 016730 336 VPC 338 (384)
Q Consensus 336 ~~~ 338 (384)
+..
T Consensus 170 ~~~ 172 (195)
T 3cgg_A 170 ENA 172 (195)
T ss_dssp EEE
T ss_pred eee
Confidence 664
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.18 E-value=7.1e-11 Score=107.76 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=89.5
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~ 236 (384)
.|....+..........+.+.++.+|||+|||+|..+..++... +.|+++|+++.+++.+++++...| ++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 34443333333344555677889999999999999999998874 689999999999999999998877 7889899
Q ss_pred CCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 237 DGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 237 D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+..... ..++||+|+++.++... ...+.+.| ||||++++++.+-
T Consensus 124 d~~~~~~--~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L----~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 124 DGTLGYE--EEKPYDRVVVWATAPTL----------------------------LCKPYEQL----KEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCG--GGCCEEEEEESSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECSS
T ss_pred Ccccccc--cCCCccEEEECCcHHHH----------------------------HHHHHHHc----CCCcEEEEEEcCC
Confidence 9876322 13689999998764221 01344554 9999999987653
No 135
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.18 E-value=9.1e-11 Score=112.19 Aligned_cols=114 Identities=11% Similarity=-0.039 Sum_probs=88.4
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.++++.+|||+|||+|..+..++........|+++|+++..++.+++++...|+.+ +.++.+|+..++. . +.||.|
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--R-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--C-SCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--c-CCeEEE
Confidence 35688999999999999998876333445799999999999999999999999875 9999999988753 2 789999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
++..+ +- +...+. ...+++..+.+.| ||||+++.++.+
T Consensus 192 ~~~~~------~~------~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~ 229 (305)
T 3ocj_A 192 TSNGL------NI------YEPDDA-------RVTELYRRFWQAL----KPGGALVTSFLT 229 (305)
T ss_dssp ECCSS------GG------GCCCHH-------HHHHHHHHHHHHE----EEEEEEEEECCC
T ss_pred EECCh------hh------hcCCHH-------HHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 97543 11 111222 2345788888886 999999998744
No 136
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.18 E-value=3.4e-10 Score=108.50 Aligned_cols=116 Identities=9% Similarity=0.074 Sum_probs=90.4
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~ 249 (384)
...+.+.+|.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.+++++...|+. ++.+..+|+..++ +.
T Consensus 83 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 155 (318)
T 2fk8_A 83 LDKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-----EP 155 (318)
T ss_dssp HTTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----CC
T ss_pred HHhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----CC
Confidence 3445677899999999999999999998763 58999999999999999999999885 4889899987653 67
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
||+|++... +..- ... ...++|..+.++| ||||+++.++.+...
T Consensus 156 fD~v~~~~~------l~~~-------~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 156 VDRIVSIEA------FEHF-------GHE-------NYDDFFKRCFNIM----PADGRMTVQSSVSYH 199 (318)
T ss_dssp CSEEEEESC------GGGT-------CGG-------GHHHHHHHHHHHS----CTTCEEEEEEEECCC
T ss_pred cCEEEEeCh------HHhc-------CHH-------HHHHHHHHHHHhc----CCCcEEEEEEeccCC
Confidence 999998532 1111 111 1345778888875 999999998887644
No 137
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.17 E-value=2.2e-10 Score=107.35 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=87.7
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
...++.+|||+|||+|..+..+++..+ .+.|+++|+++..++.+++++...|+.++.+...|+..++. ..++||.|+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v~ 110 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF--EDSSFDHIF 110 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS--CTTCEEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC--CCCCeeEEE
Confidence 346899999999999999999998854 37999999999999999999999999999999999987653 347899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+... +. +...+ ..+|..+.++| ||||+++..+
T Consensus 111 ~~~~------l~------~~~~~----------~~~l~~~~~~L----~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFV------LE------HLQSP----------EEALKSLKKVL----KPGGTITVIE 142 (276)
T ss_dssp EESC------GG------GCSCH----------HHHHHHHHHHE----EEEEEEEEEE
T ss_pred Eech------hh------hcCCH----------HHHHHHHHHHc----CCCcEEEEEE
Confidence 8543 11 11111 24677777775 9999999876
No 138
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.17 E-value=2.6e-10 Score=112.91 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=89.1
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-----C-C--ceEEEEecCCCCccc---
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----G-V--TNTIVCNYDGNELPK--- 243 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-----g-~--~~v~~~~~D~~~~~~--- 243 (384)
++.+|.+|||+|||+|..+..+++..+..+.|+++|+++.+++.+++++++. | . .++.++.+|+..+..
T Consensus 80 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 80 GSLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GGGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred cCCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 4568899999999999999999998865679999999999999999998876 4 3 589999999987621
Q ss_pred -ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 244 -VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 244 -~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+..++||+|+++.. +. +... ...+|..+.++| ||||+|++++..
T Consensus 160 ~~~~~~~fD~V~~~~~------l~------~~~d----------~~~~l~~~~r~L----kpgG~l~i~~~~ 205 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCV------CN------LSTN----------KLALFKEIHRVL----RDGGELYFSDVY 205 (383)
T ss_dssp CCCCTTCEEEEEEESC------GG------GCSC----------HHHHHHHHHHHE----EEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccc------hh------cCCC----------HHHHHHHHHHHc----CCCCEEEEEEec
Confidence 234478999998643 11 1111 135788888886 999999988643
No 139
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.17 E-value=2.5e-10 Score=102.32 Aligned_cols=113 Identities=14% Similarity=0.104 Sum_probs=88.2
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~f 250 (384)
..+.++++ +|||+|||+|..+..+++. ....|+++|+++..++.+++++...|+. ++.+.++|+..++ +..++|
T Consensus 38 ~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 112 (219)
T 3dlc_A 38 NRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--IEDNYA 112 (219)
T ss_dssp HHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--SCTTCE
T ss_pred HhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--CCcccc
Confidence 33455566 9999999999999999987 3369999999999999999999999985 6999999998865 334789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|.|++.... .+... ..++|..+.+.| ||||+++.++...
T Consensus 113 D~v~~~~~l------------~~~~~----------~~~~l~~~~~~L----~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 113 DLIVSRGSV------------FFWED----------VATAFREIYRIL----KSGGKTYIGGGFG 151 (219)
T ss_dssp EEEEEESCG------------GGCSC----------HHHHHHHHHHHE----EEEEEEEEEECCS
T ss_pred cEEEECchH------------hhccC----------HHHHHHHHHHhC----CCCCEEEEEeccC
Confidence 999986531 11111 234778888876 9999999876433
No 140
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.17 E-value=4.8e-11 Score=108.04 Aligned_cols=144 Identities=14% Similarity=0.164 Sum_probs=97.4
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHH----HHHcCCceEEEEecCCCCcccccC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTAN----LHRMGVTNTIVCNYDGNELPKVLG 246 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n----~~r~g~~~v~~~~~D~~~~~~~~~ 246 (384)
...+.++++.+|||+|||+|..+..+++..+ .+.|+++|+|+.+++.+.++ ....++.++.+.++|+..++..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~-- 96 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL-- 96 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC--
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC--
Confidence 4455678899999999999999999999754 47999999999988865433 3456778899999999987642
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC-----------
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI----------- 315 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi----------- 315 (384)
.+. |.|.+..|. ..........+.++|..+.++| ||||+++++....
T Consensus 97 ~~~-d~v~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~ 154 (218)
T 3mq2_A 97 SGV-GELHVLMPW-----------------GSLLRGVLGSSPEMLRGMAAVC----RPGASFLVALNLHAWRPSVPEVGE 154 (218)
T ss_dssp CCE-EEEEEESCC-----------------HHHHHHHHTSSSHHHHHHHHTE----EEEEEEEEEEEGGGBTTBCGGGTT
T ss_pred CCC-CEEEEEccc-----------------hhhhhhhhccHHHHHHHHHHHc----CCCcEEEEEecccccccccccccc
Confidence 244 888765441 0111112222356788888886 9999999853221
Q ss_pred Ccccc----HHHHHHHHhcCCCEEeecC
Q 016730 316 MVTEN----EAVIDYALKKRDVKLVPCG 339 (384)
Q Consensus 316 ~~~EN----e~vv~~~l~~~~~~l~~~~ 339 (384)
.+.-+ .+.+...++..++++..+.
T Consensus 155 ~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 155 HPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp CCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCccchHHHHHHHHHHHHHcCCCceeee
Confidence 11112 2234456677788877653
No 141
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.17 E-value=9.6e-11 Score=105.66 Aligned_cols=136 Identities=6% Similarity=0.005 Sum_probs=92.8
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHH------------cCCceEEEEecCCCCc
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------------MGVTNTIVCNYDGNEL 241 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r------------~g~~~v~~~~~D~~~~ 241 (384)
+.+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++... .+..++.+.++|+..+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 34567899999999999999999886 25899999999999999887543 1235788999999887
Q ss_pred ccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc---
Q 016730 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT--- 318 (384)
Q Consensus 242 ~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~--- 318 (384)
+... .++||.|++-.. +. ..... ...+.+.++.++| ||||++++.++.....
T Consensus 95 ~~~~-~~~fD~v~~~~~------l~-------~l~~~-------~~~~~l~~~~r~L----kpgG~~~l~~~~~~~~~~~ 149 (203)
T 1pjz_A 95 TARD-IGHCAAFYDRAA------MI-------ALPAD-------MRERYVQHLEALM----PQACSGLLITLEYDQALLE 149 (203)
T ss_dssp THHH-HHSEEEEEEESC------GG-------GSCHH-------HHHHHHHHHHHHS----CSEEEEEEEEESSCSSSSS
T ss_pred Cccc-CCCEEEEEECcc------hh-------hCCHH-------HHHHHHHHHHHHc----CCCcEEEEEEEecCccccC
Confidence 6321 157999986321 11 11111 1245677777775 9999977777655321
Q ss_pred -----ccHHHHHHHHhcCCCEEeec
Q 016730 319 -----ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 -----ENe~vv~~~l~~~~~~l~~~ 338 (384)
-.++.+..+++. +++++..
T Consensus 150 ~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 150 GPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp SCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 124445555555 6666543
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.16 E-value=4.9e-11 Score=116.40 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=95.1
Q ss_pred cchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCC
Q 016730 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 168 ~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~ 247 (384)
.+....+.+.++.+|||+|||+|..+..++...+ ...|+++|+|+.+++.+++++...++. +.+...|+.... .
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~----~ 259 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV----K 259 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC----C
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc----c
Confidence 3344455566788999999999999999998754 358999999999999999999999886 556788887643 3
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ 318 (384)
++||.|++++|... |. ........+++..+.+.| ||||.++.++.+..+.
T Consensus 260 ~~fD~Iv~~~~~~~-g~----------------~~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 260 GRFDMIISNPPFHD-GM----------------QTSLDAAQTLIRGAVRHL----NSGGELRIVANAFLPY 309 (343)
T ss_dssp SCEEEEEECCCCCS-SS----------------HHHHHHHHHHHHHHGGGE----EEEEEEEEEEETTSSH
T ss_pred CCeeEEEECCCccc-Cc----------------cCCHHHHHHHHHHHHHhC----CCCcEEEEEEcCCCCc
Confidence 68999999998521 11 001123456888888886 9999999998887653
No 143
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.16 E-value=3.3e-11 Score=110.78 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=84.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
++++.+|||+|||+|..+..++... ...|+++|+|+.+++.++++.+..+ .++.++.+|+..+...+..++||.|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 5689999999999999998886532 2489999999999999999998877 578999999887622244578999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
|.- +... ++. .. .....++..+.++| ||||++++..++
T Consensus 135 d~~----~~~~--~~~----~~-------~~~~~~l~~~~r~L----kpgG~l~~~~~~ 172 (236)
T 1zx0_A 135 DTY----PLSE--ETW----HT-------HQFNFIKNHAFRLL----KPGGVLTYCNLT 172 (236)
T ss_dssp CCC----CCBG--GGT----TT-------HHHHHHHHTHHHHE----EEEEEEEECCHH
T ss_pred CCc----ccch--hhh----hh-------hhHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 721 1000 110 00 11245677888876 999999987665
No 144
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.15 E-value=4.1e-11 Score=115.46 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=73.5
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeC----CHHHHHHHHHHHHHcCCceEEEEec-CCCCcccccCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM----KASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTV 250 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~----~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~~~~~~~f 250 (384)
+++|.+|||+|||||+.|.++++. +.|+|+|+ ++.++..+ ..+..|..++.++.+ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~----~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP----PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC----CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC----cCCC
Confidence 367899999999999999998886 57999999 55443211 112234467888888 888764 2689
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|+|++|.+|+ +|... .+.. . +..+|..+.+.| ||||.++..
T Consensus 150 D~V~sd~~~~-~g~~~----------~d~~---~--~l~~L~~~~~~L----kpGG~~v~k 190 (305)
T 2p41_A 150 DTLLCDIGES-SPNPT----------VEAG---R--TLRVLNLVENWL----SNNTQFCVK 190 (305)
T ss_dssp SEEEECCCCC-CSSHH----------HHHH---H--HHHHHHHHHHHC----CTTCEEEEE
T ss_pred CEEEECCccc-cCcch----------hhHH---H--HHHHHHHHHHHh----CCCCEEEEE
Confidence 9999999987 66410 0110 0 113667777775 999988863
No 145
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.15 E-value=6.2e-10 Score=105.46 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=100.4
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
...++.+|||+|||+|..+..+++..+ ..|+++|+++..++.+++++...|+. ++.+..+|+..++ +..++||+|
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC--CCCCCEeEE
Confidence 667899999999999999999998763 58999999999999999999999984 6999999998875 334789999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc---------------
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT--------------- 318 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~--------------- 318 (384)
++.-. +..-+ . ...+|..+.++| ||||+++.++......
T Consensus 155 ~~~~~------l~~~~------~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (297)
T 2o57_A 155 WSQDA------FLHSP------D----------KLKVFQECARVL----KPRGVMAITDPMKEDGIDKSSIQPILDRIKL 208 (297)
T ss_dssp EEESC------GGGCS------C----------HHHHHHHHHHHE----EEEEEEEEEEEEECTTCCGGGGHHHHHHHTC
T ss_pred Eecch------hhhcC------C----------HHHHHHHHHHHc----CCCeEEEEEEeccCCCCchHHHHHHHHHhcC
Confidence 97422 11111 1 235778888876 9999999987543211
Q ss_pred ---ccHHHHHHHHhcCCCEEeec
Q 016730 319 ---ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 ---ENe~vv~~~l~~~~~~l~~~ 338 (384)
-+...+..++++.|++++..
T Consensus 209 ~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 209 HDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp SSCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEE
Confidence 13344555667778777654
No 146
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.15 E-value=1e-09 Score=108.96 Aligned_cols=108 Identities=12% Similarity=0.089 Sum_probs=84.6
Q ss_pred CCCCcccccceEEEeCCcCc---chhh---hcCCCCCceEEEeccCCChHHHHHHHHccC--------------------
Q 016730 149 IGATPEYMAGFYMLQSASSF---LPVM---ALAPQEKERVIDMAAAPGGKTTYIAALMKN-------------------- 202 (384)
Q Consensus 149 ~~~~~~~~~G~~~~Qd~ss~---l~~~---~L~~~~g~~VLD~cagpGgkt~~la~~~~~-------------------- 202 (384)
+...+.++.|+...|..+.. +++. +....++.+|||.|||+|+.++.++....+
T Consensus 160 ~sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~ 239 (385)
T 3ldu_A 160 TTGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKK 239 (385)
T ss_dssp SCCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHH
T ss_pred cCCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHH
Confidence 34457788898877766554 3332 345678999999999999999888776432
Q ss_pred -----------------CceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEEEEcCCC
Q 016730 203 -----------------TGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 203 -----------------~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
...|+++|+|+..++.+++|+...|+. ++.+.+.|+.+++. ...||+|++|||.
T Consensus 240 ~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 240 IWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS---EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC---SCBSCEEEECCCC
T ss_pred HHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc---CCCCcEEEECCCC
Confidence 147999999999999999999999996 69999999988753 2589999999994
No 147
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.15 E-value=6.8e-11 Score=112.37 Aligned_cols=114 Identities=15% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CC---------ceEEEEecCCCCcccc
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV---------TNTIVCNYDGNELPKV 244 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~---------~~v~~~~~D~~~~~~~ 244 (384)
..++.+|||+|||+|+.+..+++. + ..+|+++|+|+..++.+++++ ++ ++ .++.++.+|+..+...
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc
Confidence 345689999999999999988876 3 479999999999999999998 55 32 4689999998764322
Q ss_pred cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 245 ~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
.++||+|++|+|+. .|. + .. + .+.+++..+.+.| +|||.++..+++..
T Consensus 150 --~~~fD~Ii~d~~~~-~~~----~--------~~---l--~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 150 --NRGFDVIIADSTDP-VGP----A--------KV---L--FSEEFYRYVYDAL----NNPGIYVTQAGSVY 197 (281)
T ss_dssp --CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred --cCCeeEEEECCCCC-CCc----c--------hh---h--hHHHHHHHHHHhc----CCCcEEEEEcCCcc
Confidence 36899999999852 110 0 00 0 1345777778875 99999999887753
No 148
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.15 E-value=4.4e-10 Score=100.18 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=83.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++ +|||+|||+|..+..++.. ...|+++|+++.+++.+++++...|. ++.+...|+..++ +..+.||.|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFD--IVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBS--CCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcC--CCcCCccEEEE
Confidence 4567 9999999999999888775 35899999999999999999998887 7888899998765 23478999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
... ..... ...++|..+.++| ||||+++.++.+.
T Consensus 101 ~~~---------------~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 IFC---------------HLPSS-------LRQQLYPKVYQGL----KPGGVFILEGFAP 134 (202)
T ss_dssp ECC---------------CCCHH-------HHHHHHHHHHTTC----CSSEEEEEEEECT
T ss_pred Ehh---------------cCCHH-------HHHHHHHHHHHhc----CCCcEEEEEEecc
Confidence 321 11222 2356778888875 9999999987654
No 149
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.14 E-value=2.1e-10 Score=105.53 Aligned_cols=134 Identities=10% Similarity=0.054 Sum_probs=98.9
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...|..++.+...|+..++. ..+.||+|+++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v~~~ 153 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP--EPDSYDVIWIQ 153 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC--CSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC--CCCCEEEEEEc
Confidence 368899999999999988877754 35899999999999999999888766678898999877653 23689999986
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc-----------cccHHHHH
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV-----------TENEAVID 325 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~-----------~ENe~vv~ 325 (384)
.. +. ..... ....+|..+.++| ||||+++.++..... .-+.+.+.
T Consensus 154 ~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (241)
T 2ex4_A 154 WV------IG-------HLTDQ-------HLAEFLRRCKGSL----RPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVR 209 (241)
T ss_dssp SC------GG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHH
T ss_pred ch------hh-------hCCHH-------HHHHHHHHHHHhc----CCCeEEEEEEccCCCcceecccCCcccCCHHHHH
Confidence 32 11 11111 1246788888876 999999997753321 11566677
Q ss_pred HHHhcCCCEEeec
Q 016730 326 YALKKRDVKLVPC 338 (384)
Q Consensus 326 ~~l~~~~~~l~~~ 338 (384)
.++++.|++++..
T Consensus 210 ~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 210 RIICSAGLSLLAE 222 (241)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCeEEEe
Confidence 7788888877664
No 150
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.14 E-value=4.7e-11 Score=123.64 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=112.5
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCC-----------------ceEEEEeCCHHHHHHH
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNT-----------------GLIYANEMKASRLKSL 219 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~-----------------g~V~a~D~~~~rl~~l 219 (384)
.|.|+--..-+.+.+.++.+.+|.+|||.|||+|+..+.++..+... ..++|+|+++..+..+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 45555444444566777889999999999999999998888776421 3699999999999999
Q ss_pred HHHHHHcCCce-----EEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 016730 220 TANLHRMGVTN-----TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (384)
Q Consensus 220 ~~n~~r~g~~~-----v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a 294 (384)
+.|+...|+.+ +.+.++|+...+. ....+||+|+.|||+++........+.....+ ..+..++.++
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~-~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~--------~~~~~Fl~~~ 298 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDG-ENLPKAHIVATNPPFGSAAGTNITRTFVHPTS--------NKQLCFMQHI 298 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHH-HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCS--------CHHHHHHHHH
T ss_pred HHHHHHhCCCccccccCCeEeCCCccccc-ccccCCeEEEECCCcccccchhhHhhcCCCCC--------chHHHHHHHH
Confidence 99999888876 7788899876432 12368999999999988754321111111111 1234578888
Q ss_pred HHchhccCCCCcEEEEEecc--CCccccHHHHH-HHHhcCC
Q 016730 295 IDMVDANSKSGGYIVYSTCS--IMVTENEAVID-YALKKRD 332 (384)
Q Consensus 295 ~~~L~~~lkpGG~lvYsTCS--i~~~ENe~vv~-~~l~~~~ 332 (384)
+++| ||||++++.+.. ++....+..+. +++++..
T Consensus 299 l~~L----k~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~~ 335 (541)
T 2ar0_A 299 IETL----HPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCH 335 (541)
T ss_dssp HHHE----EEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHEE
T ss_pred HHHh----CCCCEEEEEecCcceecCcHHHHHHHHHhhcCC
Confidence 9886 999999988653 22333344554 6666543
No 151
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.14 E-value=3.6e-10 Score=102.00 Aligned_cols=111 Identities=12% Similarity=0.118 Sum_probs=83.6
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCE
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
.+.+.++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++. .++.+..+|+..++.. +.||.
T Consensus 40 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~---~~fD~ 109 (220)
T 3hnr_A 40 DVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP---TSIDT 109 (220)
T ss_dssp HHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC---SCCSE
T ss_pred HhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC---CCeEE
Confidence 344568899999999999999988886 3689999999999999988765 4678889999887532 78999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
|++... +. ..... .+..+|..+.+.| ||||.++.++.....
T Consensus 110 v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 110 IVSTYA------FH-------HLTDD-------EKNVAIAKYSQLL----NKGGKIVFADTIFAD 150 (220)
T ss_dssp EEEESC------GG-------GSCHH-------HHHHHHHHHHHHS----CTTCEEEEEEECBSS
T ss_pred EEECcc------hh-------cCChH-------HHHHHHHHHHHhc----CCCCEEEEEeccccC
Confidence 998642 11 11111 1145778888875 999999998755443
No 152
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=6.7e-11 Score=108.80 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=83.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCC-HHHHHHH---HHHHHHcCCceEEEEecCCCCcccccCCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMK-ASRLKSL---TANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~-~~rl~~l---~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.+++++|||+|||+|..+..+++..+ ...|+|+|+| +.+++.+ ++++.+.|+.++.+..+|+..++.... ..||
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~-d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELK-NIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGT-TCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhcc-CeEE
Confidence 46789999999999999998887543 4789999999 5555555 888888899999999999998864332 5688
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.|.+..|- +............+|..+.++| ||||+++.++
T Consensus 100 ~i~~~~~~-----------------~~~~~~~~~~~~~~l~~~~r~L----kpGG~l~i~~ 139 (225)
T 3p2e_A 100 SISILFPW-----------------GTLLEYVIKPNRDILSNVADLA----KKEAHFEFVT 139 (225)
T ss_dssp EEEEESCC-----------------HHHHHHHHTTCHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEEEeCCC-----------------cHHhhhhhcchHHHHHHHHHhc----CCCcEEEEEE
Confidence 88887661 1111111111235677777775 9999999844
No 153
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.14 E-value=8.6e-10 Score=98.97 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=83.9
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
...++.+|||+|||+|..+..++.. ...|+++|+++..++.+++ .|..++.++.+|+..+ ...++||+|+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~---~~~~~~D~v~ 112 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW---TPDRQWDAVF 112 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC---CCSSCEEEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC---CCCCceeEEE
Confidence 3667889999999999999999887 3689999999999999887 6777899999999876 2347899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+.. ++.. .... ....+|..+.+.| ||||++++++.+-
T Consensus 113 ~~~------~l~~-------~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 113 FAH------WLAH-------VPDD-------RFEAFWESVRSAV----APGGVVEFVDVTD 149 (218)
T ss_dssp EES------CGGG-------SCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECC
T ss_pred Eec------hhhc-------CCHH-------HHHHHHHHHHHHc----CCCeEEEEEeCCC
Confidence 853 2111 1111 1245788888886 9999999998765
No 154
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.13 E-value=2.8e-10 Score=102.29 Aligned_cols=128 Identities=13% Similarity=0.061 Sum_probs=94.9
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
...++.+|||+|||+|..+..+++. ...|+++|+++..++.+++++ ++.+..+|+..++ ..+.||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~---~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD---AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC---CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC---CCCcEEEEE
Confidence 3457889999999999999988876 358999999999999999887 3445677877766 247899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc-----------ccHHH
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-----------ENEAV 323 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~-----------ENe~v 323 (384)
+... + .....++ ...+|..+.+.| ||||+++.+++..... -+.+.
T Consensus 108 ~~~~------l-------~~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 108 AHAC------L-------LHVPRDE-------LADVLKLIWRAL----KPGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp ECSC------G-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred ecCc------h-------hhcCHHH-------HHHHHHHHHHhc----CCCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 8532 1 1112222 345788888876 9999999987765432 25667
Q ss_pred HHHHHhcCC-CEEeec
Q 016730 324 IDYALKKRD-VKLVPC 338 (384)
Q Consensus 324 v~~~l~~~~-~~l~~~ 338 (384)
+..+++..| ++++..
T Consensus 164 ~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 164 LRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHCCCSEEEE
T ss_pred HHHHHHhCCCcEEEEE
Confidence 777888878 887664
No 155
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.13 E-value=5.1e-12 Score=125.95 Aligned_cols=155 Identities=14% Similarity=0.043 Sum_probs=101.6
Q ss_pred ceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC
Q 016730 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (384)
Q Consensus 158 G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D 237 (384)
|.|+--..-+..++..+.+.++.+|||+|||+|+.+..+++..+....|+|+|+++..++.+ .++.+.++|
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D 89 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILAD 89 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESC
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCC
Confidence 33333333334455556655677999999999999999998874447999999999988665 467888999
Q ss_pred CCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----------HHHHHHHHHHHHHchhccCCCCcE
Q 016730 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----------SYLQKQLILAAIDMVDANSKSGGY 307 (384)
Q Consensus 238 ~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----------~~~Q~~iL~~a~~~L~~~lkpGG~ 307 (384)
...... .++||+|+++||+...+...+-+ ........... ...+..++..+.++| +|||+
T Consensus 90 ~~~~~~---~~~fD~Ii~NPPy~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L----k~~G~ 159 (421)
T 2ih2_A 90 FLLWEP---GEAFDLILGNPPYGIVGEASKYP---IHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL----KPGGV 159 (421)
T ss_dssp GGGCCC---SSCEEEEEECCCCCCBSCTTTCS---BCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE----EEEEE
T ss_pred hhhcCc---cCCCCEEEECcCccCcccccccc---cccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh----CCCCE
Confidence 876542 26899999999997766421100 00001111000 124567899999986 99999
Q ss_pred EEEEeccC--CccccHHHHHHHHhcC
Q 016730 308 IVYSTCSI--MVTENEAVIDYALKKR 331 (384)
Q Consensus 308 lvYsTCSi--~~~ENe~vv~~~l~~~ 331 (384)
+++.+++- .....+.+.++++++.
T Consensus 160 ~~~i~p~~~l~~~~~~~lr~~l~~~~ 185 (421)
T 2ih2_A 160 LVFVVPATWLVLEDFALLREFLAREG 185 (421)
T ss_dssp EEEEEEGGGGTCGGGHHHHHHHHHHS
T ss_pred EEEEEChHHhcCccHHHHHHHHHhcC
Confidence 99988763 2333455555555543
No 156
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.13 E-value=4.6e-10 Score=101.54 Aligned_cols=108 Identities=13% Similarity=0.139 Sum_probs=84.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..++... ..|+++|+|+..++.++++++..+ .++.++.+|+..++ ...++||.|++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS--FEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC--SCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCC--CCCCcEEEEEEc
Confidence 358899999999999998888763 389999999999999999999887 67889999998765 233689999997
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+. . .....+ ..++|..+.+.| ||||+++..++.
T Consensus 111 ~~~------------~-~~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSI------------V-HFEPLE-------LNQVFKEVRRVL----KPSGKFIMYFTD 144 (227)
T ss_dssp SCG------------G-GCCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred Cch------------H-hCCHHH-------HHHHHHHHHHHc----CCCcEEEEEecC
Confidence 651 0 111111 245778888876 999999998775
No 157
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.12 E-value=7.6e-10 Score=104.32 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=98.5
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
++.+|||+|||+|..+..++.. ...|+++|+++.+++.+++++...|+ .++.++.+|+..++.. ..++||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-LETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-CSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-cCCCceEEEEC
Confidence 4779999999999999988886 36899999999999999999999998 6799999999887643 34789999985
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc-------------------
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV------------------- 317 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~------------------- 317 (384)
.. +. +...+ .++|..+.++| ||||+++.++.+...
T Consensus 144 ~~------l~------~~~~~----------~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (285)
T 4htf_A 144 AV------LE------WVADP----------RSVLQTLWSVL----RPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMP 197 (285)
T ss_dssp SC------GG------GCSCH----------HHHHHHHHHTE----EEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCC
T ss_pred ch------hh------cccCH----------HHHHHHHHHHc----CCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcc
Confidence 43 11 11111 34788888886 999999988753211
Q ss_pred -----------cccHHHHHHHHhcCCCEEeec
Q 016730 318 -----------TENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 318 -----------~ENe~vv~~~l~~~~~~l~~~ 338 (384)
--..+.+..+++..|++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~ 229 (285)
T 4htf_A 198 KKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGK 229 (285)
T ss_dssp CC----CCCSCCBCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHCCCceeee
Confidence 112355667778888887754
No 158
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.12 E-value=2.6e-10 Score=107.58 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=86.0
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
..+...++.+|||+|||+|..+..++.. ...|+++|+|+..++.+++++...|+ ++.+..+|+..++. .+.||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI---QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC---CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc---cCCcc
Confidence 3344457899999999999999998886 35899999999999999999999998 89999999887654 37899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.|++..+.. ..... ....+|..+.+.| ||||++++++
T Consensus 187 ~i~~~~~~~-------------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~ 223 (286)
T 3m70_A 187 FIVSTVVFM-------------FLNRE-------RVPSIIKNMKEHT----NVGGYNLIVA 223 (286)
T ss_dssp EEEECSSGG-------------GSCGG-------GHHHHHHHHHHTE----EEEEEEEEEE
T ss_pred EEEEccchh-------------hCCHH-------HHHHHHHHHHHhc----CCCcEEEEEE
Confidence 999976421 11111 1245788888886 9999976643
No 159
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.11 E-value=8.6e-11 Score=103.02 Aligned_cols=133 Identities=14% Similarity=0.088 Sum_probs=90.7
Q ss_pred chhhhcCC--CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccC
Q 016730 169 LPVMALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG 246 (384)
Q Consensus 169 l~~~~L~~--~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~ 246 (384)
+.+..+.. .++.+|||+|||+|..+..+++.. .|+|+|+|+.+++. ..++.++++|+.... .
T Consensus 12 ~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~---~ 75 (170)
T 3q87_B 12 TLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCSI---N 75 (170)
T ss_dssp HHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTTB---C
T ss_pred HHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhhc---c
Confidence 33444554 678899999999999998877653 89999999999887 356788899987732 2
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHH
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~ 326 (384)
.++||.|++++|.....-. .. +..... ..+++..+++. + |||+++.++.+. .+.+.+..
T Consensus 76 ~~~fD~i~~n~~~~~~~~~----~~-~~~~~~--------~~~~~~~~~~~----l-pgG~l~~~~~~~---~~~~~l~~ 134 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDD----PI-IGGGYL--------GREVIDRFVDA----V-TVGMLYLLVIEA---NRPKEVLA 134 (170)
T ss_dssp GGGCSEEEECCCCBTTCCC----TT-TBCCGG--------GCHHHHHHHHH----C-CSSEEEEEEEGG---GCHHHHHH
T ss_pred cCCCCEEEECCCCccCCcc----cc-ccCCcc--------hHHHHHHHHhh----C-CCCEEEEEEecC---CCHHHHHH
Confidence 2689999999985322110 00 111111 12355566665 4 999999887655 45566667
Q ss_pred HHhcCCCEEeec
Q 016730 327 ALKKRDVKLVPC 338 (384)
Q Consensus 327 ~l~~~~~~l~~~ 338 (384)
++++.+++.+.+
T Consensus 135 ~l~~~gf~~~~~ 146 (170)
T 3q87_B 135 RLEERGYGTRIL 146 (170)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCcEEEE
Confidence 777788877654
No 160
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.11 E-value=5.4e-10 Score=103.00 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=97.8
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
+...++.+|||+|||+|..+..++... ...|+++|+++..++.+++++... .++.+..+|+..++. ..+.||+|
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~--~~~~fD~v 162 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL--PPNTYDLI 162 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC--CSSCEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC--CCCCeEEE
Confidence 345678999999999999999888875 357999999999999999987654 678898999877652 34689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc------------ccH
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------------ENE 321 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~------------ENe 321 (384)
++... + ...... ...++|..+.++| ||||++++++...... -..
T Consensus 163 ~~~~~------l-------~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 218 (254)
T 1xtp_A 163 VIQWT------A-------IYLTDA-------DFVKFFKHCQQAL----TPNGYIFFKENCSTGDRFLVDKEDSSLTRSD 218 (254)
T ss_dssp EEESC------G-------GGSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEBC--CCEEEETTTTEEEBCH
T ss_pred EEcch------h-------hhCCHH-------HHHHHHHHHHHhc----CCCeEEEEEecCCCcccceecccCCcccCCH
Confidence 97431 1 111211 1356788888876 9999999988532211 134
Q ss_pred HHHHHHHhcCCCEEeec
Q 016730 322 AVIDYALKKRDVKLVPC 338 (384)
Q Consensus 322 ~vv~~~l~~~~~~l~~~ 338 (384)
+.+..++++.|++++..
T Consensus 219 ~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 219 IHYKRLFNESGVRVVKE 235 (254)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCEEEEe
Confidence 66667777778777654
No 161
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.10 E-value=2.8e-10 Score=108.24 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=86.1
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCcccccCCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~---~~v~~~~~D~~~~~~~~~~~~f 250 (384)
+.+.+ .+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++...++ .++.++.+|+..++. .+.|
T Consensus 79 ~~~~~-~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~f 151 (299)
T 3g2m_A 79 TGPVS-GPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---DKRF 151 (299)
T ss_dssp HCCCC-SCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC---SCCE
T ss_pred hCCCC-CcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc---CCCc
Confidence 34444 49999999999999988876 35899999999999999999998875 579999999998764 3789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|.|++... + ....++. ...++|..+.+.| ||||+|+.++....
T Consensus 152 D~v~~~~~-----~-------~~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 152 GTVVISSG-----S-------INELDEA-------DRRGLYASVREHL----EPGGKFLLSLAMSE 194 (299)
T ss_dssp EEEEECHH-----H-------HTTSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECCH
T ss_pred CEEEECCc-----c-------cccCCHH-------HHHHHHHHHHHHc----CCCcEEEEEeecCc
Confidence 99986211 1 1111222 2356788888886 99999999887653
No 162
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.10 E-value=4e-10 Score=106.59 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=90.3
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.++...++.+|||+|||+|..+..+++..++...|+++|+|+..++.+++++...+. ++.+...|+..++. .++||
T Consensus 16 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~~fD 91 (284)
T 3gu3_A 16 TVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL---NDKYD 91 (284)
T ss_dssp TTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC---SSCEE
T ss_pred HHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc---CCCee
Confidence 344567889999999999999999998876557999999999999999999988776 89999999998653 26899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.|++... +. +.... .++|..+.+.| ||||+++..++.
T Consensus 92 ~v~~~~~------l~------~~~~~----------~~~l~~~~~~L----kpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAF------LL------HMTTP----------ETMLQKMIHSV----KKGGKIICFEPH 128 (284)
T ss_dssp EEEEESC------GG------GCSSH----------HHHHHHHHHTE----EEEEEEEEEECC
T ss_pred EEEECCh------hh------cCCCH----------HHHHHHHHHHc----CCCCEEEEEecc
Confidence 9998643 11 11111 35788888886 999999988765
No 163
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.09 E-value=7.2e-10 Score=105.40 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=87.0
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCccccc----CCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL----GLNT 249 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~~~v~~~~~D~~~~~~~~----~~~~ 249 (384)
..++.+|||+|||+|..+..+++.......|+|+|+|+..++.++++++.. +..++.++++|+..++... ..++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 357899999999999999999987645579999999999999999999987 3467999999998876321 1268
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
||.|++... +.+. . ..+++..+.+.| ||||+|++.+++
T Consensus 114 fD~V~~~~~------------l~~~-~----------~~~~l~~~~~~L----kpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVEC------------AHWF-D----------FEKFQRSAYANL----RKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESC------------GGGS-C----------HHHHHHHHHHHE----EEEEEEEEEEEE
T ss_pred eeEEeHhhH------------HHHh-C----------HHHHHHHHHHhc----CCCcEEEEEecC
Confidence 999998532 1122 1 235677788876 999999885554
No 164
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.09 E-value=3.3e-10 Score=112.71 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=84.7
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHH-------HHcCC--ceEEEEecCCCCc
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL-------HRMGV--TNTIVCNYDGNEL 241 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~-------~r~g~--~~v~~~~~D~~~~ 241 (384)
...+.+++|++|||+|||+|..+..++...+ ...|+|+|+++..++.+++++ +.+|+ .++.++++|+..+
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 4456788999999999999999999887754 357999999999999888765 44576 5899999999987
Q ss_pred ccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 242 ~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.......||+|+++++|- .++ ..+.|...++. |||||+||.+..
T Consensus 245 p~~d~~~~aDVVf~Nn~~F---------------~pd--------l~~aL~Ei~Rv----LKPGGrIVssE~ 289 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAF---------------GPE--------VDHQLKERFAN----MKEGGRIVSSKP 289 (438)
T ss_dssp HHHHHHHTCSEEEECCTTC---------------CHH--------HHHHHHHHHTT----SCTTCEEEESSC
T ss_pred ccccccCCccEEEEccccc---------------Cch--------HHHHHHHHHHc----CCCCcEEEEeec
Confidence 5321014799999987741 111 12234555565 599999986533
No 165
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.08 E-value=1.6e-10 Score=110.42 Aligned_cols=126 Identities=17% Similarity=0.114 Sum_probs=85.4
Q ss_pred cCCCCCceEEEecc------CCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEE-EecCCCCcccccC
Q 016730 174 LAPQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIV-CNYDGNELPKVLG 246 (384)
Q Consensus 174 L~~~~g~~VLD~ca------gpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~-~~~D~~~~~~~~~ 246 (384)
+.+++|++|||+|| |||+ ..++++++..+.|+|+|+++. +.++.+ +.+|+..++..
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~-- 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA-- 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc--
Confidence 46788999999999 7788 566777775689999999987 245677 89999876421
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHH
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~ 326 (384)
++||+|++|+++..+|....+.. .. ..+..++|..+.+.| ||||+++...-. ....+ .+..
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~----~~-------~~l~~~~l~~a~r~L----kpGG~~v~~~~~--~~~~~-~l~~ 182 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKEND----SK-------EGFFTYLCGFIKQKL----ALGGSIAVKITE--HSWNA-DLYK 182 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCC----CC-------CTHHHHHHHHHHHHE----EEEEEEEEEECS--SSCCH-HHHH
T ss_pred -CcccEEEEcCCcccccccccccc----ch-------HHHHHHHHHHHHHhc----CCCcEEEEEEec--cCCHH-HHHH
Confidence 67999999988777775533210 01 012346788888886 999999986532 23333 4445
Q ss_pred HHhcCCCEE
Q 016730 327 ALKKRDVKL 335 (384)
Q Consensus 327 ~l~~~~~~l 335 (384)
++++.++..
T Consensus 183 ~l~~~GF~~ 191 (290)
T 2xyq_A 183 LMGHFSWWT 191 (290)
T ss_dssp HHTTEEEEE
T ss_pred HHHHcCCcE
Confidence 666665543
No 166
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.08 E-value=3.3e-10 Score=107.95 Aligned_cols=115 Identities=15% Similarity=0.074 Sum_probs=82.6
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-----------------------------
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----------------------------- 228 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~----------------------------- 228 (384)
++.+|||+|||+|..+..++...+. ..|+|+|+|+.+++.+++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 6889999999999999999998754 6999999999999999999877653
Q ss_pred -----------------------------ceEEEEecCCCCcccc---cCCCCCCEEEEcCCCCCCCcCCCCchhhccCC
Q 016730 229 -----------------------------TNTIVCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKS 276 (384)
Q Consensus 229 -----------------------------~~v~~~~~D~~~~~~~---~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~ 276 (384)
.++.+..+|....... ...+.||+|++... ++|.
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v------------l~~i-- 190 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL------------TKWV-- 190 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC------------HHHH--
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH------------HHHh--
Confidence 3688999998754311 23478999998432 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 277 LEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 277 ~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+..-.....+++..+.++| ||||+|+..+.
T Consensus 191 --hl~~~~~~~~~~l~~~~~~L----kpGG~lil~~~ 221 (292)
T 3g07_A 191 --HLNWGDEGLKRMFRRIYRHL----RPGGILVLEPQ 221 (292)
T ss_dssp --HHHHHHHHHHHHHHHHHHHE----EEEEEEEEECC
T ss_pred --hhcCCHHHHHHHHHHHHHHh----CCCcEEEEecC
Confidence 00011123466888888886 99999998754
No 167
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=1.7e-09 Score=107.41 Aligned_cols=107 Identities=8% Similarity=0.091 Sum_probs=82.4
Q ss_pred CCCcccccceEEEeCCcCc---chh---hhcCCCCCceEEEeccCCChHHHHHHHHccC---------------------
Q 016730 150 GATPEYMAGFYMLQSASSF---LPV---MALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------------- 202 (384)
Q Consensus 150 ~~~~~~~~G~~~~Qd~ss~---l~~---~~L~~~~g~~VLD~cagpGgkt~~la~~~~~--------------------- 202 (384)
...+.++.||-..|..+.. +++ .+....++..|||.|||+|+..+.++....+
T Consensus 160 sg~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~ 239 (384)
T 3ldg_A 160 TGPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEAL 239 (384)
T ss_dssp SSSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHH
T ss_pred cCCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHH
Confidence 3456688887666655542 333 2335678999999999999998877766543
Q ss_pred ----------------CceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEEEcCCC
Q 016730 203 ----------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 203 ----------------~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
...|+++|+|+.+++.+++|+++.|+.+ +.+.++|+..++.. ..||.|++|||+
T Consensus 240 w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~---~~fD~Iv~NPPY 310 (384)
T 3ldg_A 240 VTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN---KINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC---CCSCEEEECCCC
T ss_pred HHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc---CCcCEEEECCch
Confidence 1469999999999999999999999975 89999999887542 589999999996
No 168
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.08 E-value=6.8e-10 Score=102.61 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=84.4
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~f 250 (384)
...+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.++++ ..++.+..+|+..++ ..++|
T Consensus 26 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~---~~~~f 96 (259)
T 2p35_A 26 LAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK---PAQKA 96 (259)
T ss_dssp HTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC---CSSCE
T ss_pred HHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC---ccCCc
Confidence 3445567889999999999999999998874 36899999999999999887 356788899998876 23789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
|.|++... +.+... ...+|..+.+.| ||||+++.++..
T Consensus 97 D~v~~~~~------------l~~~~~----------~~~~l~~~~~~L----~pgG~l~~~~~~ 134 (259)
T 2p35_A 97 DLLYANAV------------FQWVPD----------HLAVLSQLMDQL----ESGGVLAVQMPD 134 (259)
T ss_dssp EEEEEESC------------GGGSTT----------HHHHHHHHGGGE----EEEEEEEEEEEC
T ss_pred CEEEEeCc------------hhhCCC----------HHHHHHHHHHhc----CCCeEEEEEeCC
Confidence 99998543 111111 235778888876 999999998753
No 169
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=8.3e-10 Score=98.48 Aligned_cols=127 Identities=13% Similarity=0.033 Sum_probs=94.6
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaP 258 (384)
+.+|||+|||+|..+..++.. ...|+++|+++.+++.++++ ..++.++.+|+..++ +..+.||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLS--DSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGG--GSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccc--cCCCCeEEEEehhh
Confidence 889999999999999988886 35899999999999999887 346788899988765 33478999998532
Q ss_pred CCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc------------cccHHHHHH
Q 016730 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV------------TENEAVIDY 326 (384)
Q Consensus 259 CSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~------------~ENe~vv~~ 326 (384)
+..- ..++ ...+|..+.+.| ||||+++.++..... .-..+.+..
T Consensus 112 ------l~~~-------~~~~-------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (203)
T 3h2b_A 112 ------LIHM-------GPGE-------LPDALVALRMAV----EDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQ 167 (203)
T ss_dssp ------STTC-------CTTT-------HHHHHHHHHHTE----EEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHH
T ss_pred ------HhcC-------CHHH-------HHHHHHHHHHHc----CCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHH
Confidence 1111 1111 245778888886 999999998865432 123666777
Q ss_pred HHhcCCCEEeecC
Q 016730 327 ALKKRDVKLVPCG 339 (384)
Q Consensus 327 ~l~~~~~~l~~~~ 339 (384)
++++.|++++...
T Consensus 168 ~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 168 ALETAGFQVTSSH 180 (203)
T ss_dssp HHHHTTEEEEEEE
T ss_pred HHHHCCCcEEEEE
Confidence 8888898887653
No 170
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.06 E-value=7.7e-10 Score=101.21 Aligned_cols=130 Identities=11% Similarity=0.030 Sum_probs=96.4
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
+.+|||+|||+|..+..++. ....|+++|+++..++.+++++...+. .++.+..+|+..++. ...||+|++..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP---TELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC---SSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC---CCCeeEEEECh
Confidence 45999999999998887755 346899999999999999999887543 569999999988653 25899999743
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccc-------cHHHHHHHHhc
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTE-------NEAVIDYALKK 330 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~E-------Ne~vv~~~l~~ 330 (384)
.. .. ..+++ ...+|..+.++| ||||+++..+.+..... ..+.+..+++.
T Consensus 141 ~l------~~-------~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 196 (235)
T 3lcc_A 141 FF------CA-------IEPEM-------RPAWAKSMYELL----KPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVP 196 (235)
T ss_dssp ST------TT-------SCGGG-------HHHHHHHHHHHE----EEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGG
T ss_pred hh------hc-------CCHHH-------HHHHHHHHHHHC----CCCcEEEEEEecccccCCCCCccCCHHHHHHHHHH
Confidence 21 11 11111 245778888876 99999998776554322 45677788888
Q ss_pred CCCEEeec
Q 016730 331 RDVKLVPC 338 (384)
Q Consensus 331 ~~~~l~~~ 338 (384)
.+++++.+
T Consensus 197 ~Gf~~~~~ 204 (235)
T 3lcc_A 197 IGFKAVSV 204 (235)
T ss_dssp GTEEEEEE
T ss_pred cCCeEEEE
Confidence 88887765
No 171
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.06 E-value=1.1e-09 Score=103.24 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=87.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.+++++...|. .++.++.+|+...+.. ..+.||+|+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~ 138 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDVIS 138 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-CCCCcCEEE
Confidence 357899999999999999887775 335899999999999999999998887 4789999999876531 247899999
Q ss_pred EcCCCCCCCcCCCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 255 LDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~-~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
+... + .+. .... ...++|..+.++| ||||+++.++++
T Consensus 139 ~~~~------l------~~~~~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~ 176 (298)
T 1ri5_A 139 SQFS------F------HYAFSTSE-------SLDIAQRNIARHL----RPGGYFIMTVPS 176 (298)
T ss_dssp EESC------G------GGGGSSHH-------HHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ECch------h------hhhcCCHH-------HHHHHHHHHHHhc----CCCCEEEEEECC
Confidence 8632 1 010 1122 2356788888886 999999998875
No 172
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.06 E-value=6.1e-10 Score=99.58 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=87.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++... ..|+++|+++.+++.+++++.. ..++.+..+|+..++ +..+.||+|++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~--~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLD--FPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCC--SCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCC--CCCCcccEEEEC
Confidence 5788999999999999998887632 3899999999999999998764 356888899998764 334689999987
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.+.... ...++ ..|...... .....++|..+.++| ||||++++++.+.
T Consensus 115 ~~~~~~--~~~~~-~~~~~~~~~----~~~~~~~l~~~~~~L----kpgG~li~~~~~~ 162 (215)
T 2pxx_A 115 GTLDAL--LAGER-DPWTVSSEG----VHTVDQVLSEVSRVL----VPGGRFISMTSAA 162 (215)
T ss_dssp SHHHHH--TTTCS-CTTSCCHHH----HHHHHHHHHHHHHHE----EEEEEEEEEESCC
T ss_pred cchhhh--ccccc-cccccccch----hHHHHHHHHHHHHhC----cCCCEEEEEeCCC
Confidence 653111 00111 123323222 223466888888886 9999999988764
No 173
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.06 E-value=1.7e-09 Score=101.05 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=86.5
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHH------HHHHHHHHHHHcCC-ceEEEEecC-CCCc
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS------RLKSLTANLHRMGV-TNTIVCNYD-GNEL 241 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~------rl~~l~~n~~r~g~-~~v~~~~~D-~~~~ 241 (384)
....+.+++|.+|||+|||+|..+..++...+..+.|+++|+|+. .++.+++++...|+ .++.+...| ....
T Consensus 35 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 114 (275)
T 3bkx_A 35 IAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDD 114 (275)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTC
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhc
Confidence 344567789999999999999999999998754579999999997 89999999998888 579998888 3222
Q ss_pred ccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 242 ~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
...+..++||+|++..+. .+...+. .++... +.+ ++|||+++.++.+..
T Consensus 115 ~~~~~~~~fD~v~~~~~l------------~~~~~~~----------~~~~~~-~~l---~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 115 LGPIADQHFDRVVLAHSL------------WYFASAN----------ALALLF-KNM---AAVCDHVDVAEWSMQ 163 (275)
T ss_dssp CGGGTTCCCSEEEEESCG------------GGSSCHH----------HHHHHH-HHH---TTTCSEEEEEEECSS
T ss_pred cCCCCCCCEEEEEEccch------------hhCCCHH----------HHHHHH-HHH---hCCCCEEEEEEecCC
Confidence 112334789999986441 1111111 133333 333 477999999876654
No 174
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.05 E-value=1.1e-09 Score=109.12 Aligned_cols=107 Identities=11% Similarity=0.134 Sum_probs=82.9
Q ss_pred CCCcccccceEEEeCCcCc---chh---hhcCCCCCceEEEeccCCChHHHHHHHHccC---------------------
Q 016730 150 GATPEYMAGFYMLQSASSF---LPV---MALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------------- 202 (384)
Q Consensus 150 ~~~~~~~~G~~~~Qd~ss~---l~~---~~L~~~~g~~VLD~cagpGgkt~~la~~~~~--------------------- 202 (384)
..-+.++.||-..|.++.. +++ .+....++..|||.|||+|+..+.++....+
T Consensus 167 sg~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~ 246 (393)
T 3k0b_A 167 SGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQV 246 (393)
T ss_dssp SSSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHH
T ss_pred CCCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHH
Confidence 3445677887555554433 222 3345678899999999999998887776543
Q ss_pred ----------------CceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEEEcCCC
Q 016730 203 ----------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 203 ----------------~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
...|+++|+|+.+++.+++|+++.|+.+ +.+.++|+..++. ...||+|++|||.
T Consensus 247 w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 247 WADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT---EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC---CCCSCEEEECCCC
T ss_pred HHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC---CCCCCEEEECCCC
Confidence 1469999999999999999999999974 8999999988753 2589999999995
No 175
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.05 E-value=1.8e-09 Score=100.38 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=77.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++. ++.++.+|+..++. .+.||.|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~---~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL---GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC---SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc---cCCcCEEEEc
Confidence 35789999999999999887765 3589999999999999988753 67888999988764 3789999984
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.. ++ .+..++++ ...+|..+.+.| ||||+++.++
T Consensus 118 ~~-----~l------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~~ 151 (263)
T 3pfg_A 118 FS-----SI------GHLAGQAE-------LDAALERFAAHV----LPDGVVVVEP 151 (263)
T ss_dssp TT-----GG------GGSCHHHH-------HHHHHHHHHHTE----EEEEEEEECC
T ss_pred Cc-----hh------hhcCCHHH-------HHHHHHHHHHhc----CCCcEEEEEe
Confidence 31 11 12222222 345778888886 9999999864
No 176
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.05 E-value=1.1e-09 Score=97.96 Aligned_cols=112 Identities=17% Similarity=0.078 Sum_probs=83.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..++... ...|+++|+|+.+++.+++++...+ .++.+...|+..++ +..+.||.|++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~fD~v~~ 95 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLP--FKDESMSFVYS 95 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCC--SCTTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCC--CCCCceeEEEE
Confidence 4568899999999999765554432 3689999999999999999998877 36778889998765 23478999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
... + ......+ ..+++..+.+.| ||||++++++.+..
T Consensus 96 ~~~------l-------~~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 96 YGT------I-------FHMRKND-------VKEAIDEIKRVL----KPGGLACINFLTTK 132 (209)
T ss_dssp CSC------G-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred cCh------H-------HhCCHHH-------HHHHHHHHHHHc----CCCcEEEEEEeccc
Confidence 432 1 1112222 356778888876 99999999988753
No 177
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=1.9e-09 Score=101.44 Aligned_cols=111 Identities=20% Similarity=0.182 Sum_probs=84.1
Q ss_pred cchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCC
Q 016730 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 168 ~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~ 247 (384)
......+.+.++.+|||+|||+|..+..+++ ..+.|+++|+|+.+++.+++++ .++.+..+|+..++. .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~ 115 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV---D 115 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC---S
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc---C
Confidence 3345566778899999999999999998888 3479999999999999998765 467788899988663 3
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
++||.|++... + .+... ...+|..+.+.| ||||+++.++...
T Consensus 116 ~~fD~v~~~~~------l------~~~~d----------~~~~l~~~~~~L----kpgG~l~~~~~~~ 157 (279)
T 3ccf_A 116 KPLDAVFSNAM------L------HWVKE----------PEAAIASIHQAL----KSGGRFVAEFGGK 157 (279)
T ss_dssp SCEEEEEEESC------G------GGCSC----------HHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred CCcCEEEEcch------h------hhCcC----------HHHHHHHHHHhc----CCCcEEEEEecCC
Confidence 68999998542 1 11111 134677788876 9999999877543
No 178
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.03 E-value=1e-09 Score=100.28 Aligned_cols=108 Identities=17% Similarity=0.195 Sum_probs=81.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++. ..|+++|+++.+++.+++++...+ .++.+...|+..++. . ++||.|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~--~-~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL--P-EPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC--S-SCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC--C-CCcCEEEEe
Confidence 46789999999999988877664 689999999999999999998877 468888899877643 2 689999985
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.. + +.+..+..+ ..++|..+.++| ||||+++.++.+
T Consensus 104 ~~-----~------~~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~ 139 (243)
T 3d2l_A 104 CD-----S------LNYLQTEAD-------VKQTFDSAARLL----TDGGKLLFDVHS 139 (243)
T ss_dssp TT-----G------GGGCCSHHH-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred CC-----c------hhhcCCHHH-------HHHHHHHHHHhc----CCCeEEEEEcCC
Confidence 31 1 112222222 245778888876 999999987653
No 179
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.03 E-value=8.7e-10 Score=103.27 Aligned_cols=140 Identities=14% Similarity=0.068 Sum_probs=89.7
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC--C------------------------
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG--V------------------------ 228 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g--~------------------------ 228 (384)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999876654433 22479999999999999998875431 0
Q ss_pred ---ceEE-EEecCCCCcccc--cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccC
Q 016730 229 ---TNTI-VCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (384)
Q Consensus 229 ---~~v~-~~~~D~~~~~~~--~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~l 302 (384)
.++. ++.+|....... ...++||+|++-- + ...+........++|.++.++|
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~------~------------l~~i~~~~~~~~~~l~~i~r~L---- 187 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLL------A------------MECACCSLDAYRAALCNLASLL---- 187 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------C------------HHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehH------H------------HHHhcCCHHHHHHHHHHHHHHc----
Confidence 1233 778888874211 1236899999731 0 0110000012245778888876
Q ss_pred CCCcEEEEEeccCCc------------cccHHHHHHHHhcCCCEEeec
Q 016730 303 KSGGYIVYSTCSIMV------------TENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 303 kpGG~lvYsTCSi~~------------~ENe~vv~~~l~~~~~~l~~~ 338 (384)
||||+|+.++..-.. -=.++.+...+++.|++++..
T Consensus 188 KPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 999999999742110 014556677777888877654
No 180
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.03 E-value=2.4e-09 Score=98.93 Aligned_cols=109 Identities=13% Similarity=0.109 Sum_probs=82.5
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
..+...++.+|||+|||+|..+..+++.. ...|+++|+++..++.+++++. ..++.+..+|+..++ +..++||
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~--~~~~~fD 110 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIA--IEPDAYN 110 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCC--CCTTCEE
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCC--CCCCCeE
Confidence 34455678999999999999999888863 2389999999999999988765 457889999988765 2347899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+|++... +. +... ..++|..+.++| ||||+++.++.
T Consensus 111 ~v~~~~~------l~------~~~~----------~~~~l~~~~~~L----kpgG~l~~~~~ 146 (253)
T 3g5l_A 111 VVLSSLA------LH------YIAS----------FDDICKKVYINL----KSSGSFIFSVE 146 (253)
T ss_dssp EEEEESC------GG------GCSC----------HHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred EEEEchh------hh------hhhh----------HHHHHHHHHHHc----CCCcEEEEEeC
Confidence 9998532 11 1111 235778888876 99999999754
No 181
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.02 E-value=3e-10 Score=103.74 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=84.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-cccccC-CCCCCEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LPKVLG-LNTVDRV 253 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~-~~~~~~-~~~fD~V 253 (384)
+.++.+|||+|||+|..+.++++. ...|+++|+++.+++.++++ ..++.++++|+.. ++ +. .++||+|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--~~~~~~fD~v 115 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP--AGLGAPFGLI 115 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC--TTCCCCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC--CcCCCCEEEE
Confidence 467899999999999999988876 36899999999999999888 4568888999853 33 22 4789999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~ 333 (384)
++... +..+|..+.+.| ||||+++.... ..+.+.+...+++.++
T Consensus 116 ~~~~~----------------------------~~~~l~~~~~~L----kpgG~l~~~~~----~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 116 VSRRG----------------------------PTSVILRLPELA----APDAHFLYVGP----RLNVPEVPERLAAVGW 159 (226)
T ss_dssp EEESC----------------------------CSGGGGGHHHHE----EEEEEEEEEES----SSCCTHHHHHHHHTTC
T ss_pred EeCCC----------------------------HHHHHHHHHHHc----CCCcEEEEeCC----cCCHHHHHHHHHHCCC
Confidence 98521 123456666765 99999993222 2234456666777777
Q ss_pred EEee
Q 016730 334 KLVP 337 (384)
Q Consensus 334 ~l~~ 337 (384)
+.+.
T Consensus 160 ~~~~ 163 (226)
T 3m33_A 160 DIVA 163 (226)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6544
No 182
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.02 E-value=3.2e-10 Score=117.29 Aligned_cols=168 Identities=18% Similarity=0.193 Sum_probs=112.2
Q ss_pred cceEEEeCCcCcchhhhcC----CCCCceEEEeccCCChHHHHHHHHccC--CceEEEEeCCHHHHHHHHHHHHHcCC--
Q 016730 157 AGFYMLQSASSFLPVMALA----PQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGV-- 228 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~----~~~g~~VLD~cagpGgkt~~la~~~~~--~g~V~a~D~~~~rl~~l~~n~~r~g~-- 228 (384)
.|.|+--..-+.+.+.++. +.++.+|+|.|||+|+..+.++..+.. ...++|+|+++..+..++.|+...|+
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 4544443344555666666 678999999999999998888887642 46899999999999999999999998
Q ss_pred ceEEEEecCCCCc--ccccCCCCCCEEEEcCCCCCCCcCCCC--chhhcc----CCHHHHHHHHHHHHHHHHHHHHchhc
Q 016730 229 TNTIVCNYDGNEL--PKVLGLNTVDRVLLDAPCSGTGVISKD--ESVKTS----KSLEDIQKCSYLQKQLILAAIDMVDA 300 (384)
Q Consensus 229 ~~v~~~~~D~~~~--~~~~~~~~fD~VllDaPCSg~G~~~r~--p~~~~~----~~~~~i~~l~~~Q~~iL~~a~~~L~~ 300 (384)
.++.+.++|.... +. ....+||+|+.+||.++..-.... .+.+|. ..+. ...+..++.++++.|
T Consensus 276 ~~~~I~~gDtL~~d~p~-~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~-----s~~~~~Fl~~~l~~L-- 347 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPT-QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPK-----SKADFAFLLHGYYHL-- 347 (542)
T ss_dssp GGEEEEESCTTTSCSCC-SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCT-----TCCHHHHHHHHHHTB--
T ss_pred CccceEecceecccccc-cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCC-----chhhHHHHHHHHHHh--
Confidence 5688889998765 32 224789999999999854211100 011111 0000 111234788899986
Q ss_pred cCC-CCcEEEEEecc-CCcccc-HHHHH-HHHhcCCCE
Q 016730 301 NSK-SGGYIVYSTCS-IMVTEN-EAVID-YALKKRDVK 334 (384)
Q Consensus 301 ~lk-pGG~lvYsTCS-i~~~EN-e~vv~-~~l~~~~~~ 334 (384)
| +||++++.+-. +....+ +.-+. +++++..++
T Consensus 348 --k~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 348 --KQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAID 383 (542)
T ss_dssp --CTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEE
T ss_pred --CCCceeEEEEecchHhhCCchhHHHHHHHHhCCcee
Confidence 9 99999776543 222223 45555 666665543
No 183
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.02 E-value=1.3e-09 Score=102.64 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=82.4
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 249 (384)
....+.+.+|.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++... .-+..+...+.. .+... .+.
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~-~~~~~-~~~ 110 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE-IPKEL-AGH 110 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC-CCGGG-TTC
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc-ccccc-CCC
Confidence 345567788999999999999999998875 368999999999999999988654 222233222220 11111 368
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHH
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l 328 (384)
||.|+++... .....++ .+..+..+.++ | |||+++.|..--..+-+..++.+..
T Consensus 111 fD~Vv~~~~l-------------~~~~~~~-------~~~~l~~l~~l----L-PGG~l~lS~~~g~~~~d~~~l~~~~ 164 (261)
T 3iv6_A 111 FDFVLNDRLI-------------NRFTTEE-------ARRACLGMLSL----V-GSGTVRASVKLGFYDIDLKLIEYGE 164 (261)
T ss_dssp CSEEEEESCG-------------GGSCHHH-------HHHHHHHHHHH----H-TTSEEEEEEEBSCCHHHHHHHHHHH
T ss_pred ccEEEEhhhh-------------HhCCHHH-------HHHHHHHHHHh----C-cCcEEEEEeccCcccccHHHHHHHH
Confidence 9999997541 1122222 23455666654 6 9999987755433344445555433
No 184
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.02 E-value=7.2e-10 Score=108.14 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=84.8
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
+...++.+|||+|||+|..+..+++. +...|+|+|+++ +++.++++++..|+ .++.++.+|+.+++. +.++||+
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~D~ 134 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL--PVEKVDV 134 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC--SCSCEEE
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC--CCCcEEE
Confidence 44567899999999999999888876 335899999996 99999999999998 679999999987642 2368999
Q ss_pred EEEcCC-CCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 253 VLLDAP-CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 253 VllDaP-CSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+++.. +.. .+ .. ....+|..+.++| ||||+++.+.|++
T Consensus 135 Ivs~~~~~~l-----~~--------~~-------~~~~~l~~~~~~L----kpgG~lip~~~~~ 174 (340)
T 2fyt_A 135 IISEWMGYFL-----LF--------ES-------MLDSVLYAKNKYL----AKGGSVYPDICTI 174 (340)
T ss_dssp EEECCCBTTB-----TT--------TC-------HHHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEEcCchhhc-----cC--------HH-------HHHHHHHHHHhhc----CCCcEEEcccceE
Confidence 998752 110 00 11 1134666667775 9999999555444
No 185
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.02 E-value=8.2e-10 Score=106.08 Aligned_cols=113 Identities=11% Similarity=0.103 Sum_probs=77.5
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc------eEEEEecCCC------Ccccc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVCNYDGN------ELPKV 244 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~------~v~~~~~D~~------~~~~~ 244 (384)
.+|.+|||+|||+|+-+..++.. +.+.|+|+|+|+.+++.++++....+.. ++.+...|.. .++..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35889999999999866654442 3368999999999999999998877754 3556666662 22212
Q ss_pred cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 245 ~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
...++||+|++-- + +.+.+...+ +..+|.++.++| ||||+++.+|+.
T Consensus 125 ~~~~~FD~V~~~~------~------lhy~~~~~~-------~~~~l~~~~r~L----kpGG~~i~~~~~ 171 (302)
T 2vdw_A 125 FYFGKFNIIDWQF------A------IHYSFHPRH-------YATVMNNLSELT----ASGGKVLITTMD 171 (302)
T ss_dssp CCSSCEEEEEEES------C------GGGTCSTTT-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred ccCCCeeEEEECc------h------HHHhCCHHH-------HHHHHHHHHHHc----CCCCEEEEEeCC
Confidence 2346899998631 1 112222222 146788888886 999999998863
No 186
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.01 E-value=2.3e-09 Score=98.81 Aligned_cols=108 Identities=18% Similarity=0.114 Sum_probs=82.6
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++...|. ++.++.+|+..++. .++||.|++
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~~fD~v~~ 111 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF---KNEFDAVTM 111 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC---CSCEEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc---CCCccEEEE
Confidence 456789999999999999988875 35899999999999999999998887 68888999887653 267999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
... ... ..... ...++|..+.+.| ||||.++..+.
T Consensus 112 ~~~--~~~----------~~~~~-------~~~~~l~~~~~~L----~pgG~li~~~~ 146 (252)
T 1wzn_A 112 FFS--TIM----------YFDEE-------DLRKLFSKVAEAL----KPGGVFITDFP 146 (252)
T ss_dssp CSS--GGG----------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred cCC--chh----------cCCHH-------HHHHHHHHHHHHc----CCCeEEEEecc
Confidence 321 111 11222 2356788888876 99999987653
No 187
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.01 E-value=2.1e-09 Score=93.05 Aligned_cols=127 Identities=13% Similarity=0.163 Sum_probs=91.4
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~f 250 (384)
...+.+.++.+|||+|||+|..+..+++.. ..|+++|+++..++.++++ ..++.+...| .+ +..+.|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~--~~~~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KE--IPDNSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GG--SCTTCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CC--CCCCce
Confidence 344567789999999999999999888865 3899999999999999887 4578888888 22 234789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccc---------cH
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTE---------NE 321 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~E---------Ne 321 (384)
|.|++.... ..-+ . ...+++.+.+.| ||||+++.++......+ ..
T Consensus 77 D~v~~~~~l------~~~~------~----------~~~~l~~~~~~L----~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 130 (170)
T 3i9f_A 77 DFILFANSF------HDMD------D----------KQHVISEVKRIL----KDDGRVIIIDWRKENTGIGPPLSIRMDE 130 (170)
T ss_dssp EEEEEESCS------TTCS------C----------HHHHHHHHHHHE----EEEEEEEEEEECSSCCSSSSCGGGCCCH
T ss_pred EEEEEccch------hccc------C----------HHHHHHHHHHhc----CCCCEEEEEEcCccccccCchHhhhcCH
Confidence 999986431 1111 1 235778888876 99999999876544222 24
Q ss_pred HHHHHHHhcCCCEEeec
Q 016730 322 AVIDYALKKRDVKLVPC 338 (384)
Q Consensus 322 ~vv~~~l~~~~~~l~~~ 338 (384)
+.+..+++ +++++..
T Consensus 131 ~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 131 KDYMGWFS--NFVVEKR 145 (170)
T ss_dssp HHHHHHTT--TEEEEEE
T ss_pred HHHHHHHh--CcEEEEc
Confidence 45555555 7777654
No 188
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.01 E-value=1.7e-09 Score=102.46 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=83.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeC-CHHHHHHHHHHH-----HHcCCc-----eEEEEecCCCCcccc
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM-KASRLKSLTANL-----HRMGVT-----NTIVCNYDGNELPKV 244 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~-~~~rl~~l~~n~-----~r~g~~-----~v~~~~~D~~~~~~~ 244 (384)
..+|.+|||+|||+|..+..++.. +.+.|+++|+ ++.+++.+++|+ +..|+. ++.+...|..+....
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999877764 2358999999 899999999999 666664 677775554432111
Q ss_pred c----CCCCCCEEEE-cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCC---C--CcEEEEEecc
Q 016730 245 L----GLNTVDRVLL-DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSK---S--GGYIVYSTCS 314 (384)
Q Consensus 245 ~----~~~~fD~Vll-DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lk---p--GG~lvYsTCS 314 (384)
. ..+.||+|++ |+.. + ..+ ...++..+.++| + | ||+++.+.+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~--------~--------~~~-------~~~ll~~l~~~L----k~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLS--------F--------HQA-------HDALLRSVKMLL----ALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCS--------C--------GGG-------HHHHHHHHHHHB----CCTTTCTTCEEEEEECC
T ss_pred HHhhccCCCCCEEEEeCccc--------C--------hHH-------HHHHHHHHHHHh----cccCCCCCCEEEEEEEe
Confidence 1 2368999987 6542 1 111 234667777765 8 9 9987665443
Q ss_pred CCc---cccHHHHHHHHhcCC-CEEeec
Q 016730 315 IMV---TENEAVIDYALKKRD-VKLVPC 338 (384)
Q Consensus 315 i~~---~ENe~vv~~~l~~~~-~~l~~~ 338 (384)
..+ +..+..++ .+++.+ +++..+
T Consensus 208 ~~~~~~~~~~~~~~-~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 208 HRPHLAERDLAFFR-LVNADGALIAEPW 234 (281)
T ss_dssp --------CTHHHH-HHHHSTTEEEEEE
T ss_pred eecccchhHHHHHH-HHHhcCCEEEEEe
Confidence 322 22233333 556678 877654
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.01 E-value=3.6e-10 Score=108.28 Aligned_cols=131 Identities=14% Similarity=0.069 Sum_probs=88.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC-----CceEEEEecCCCCcccccCCCCCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g-----~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.++.+|||+|||+|+.+..++... +...|+++|+|+..++.+++++..++ -.++.++.+|+..+... ..++||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-TSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C-CCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh-cCCCcc
Confidence 346799999999999998888753 34689999999999999999988763 34688999999876432 236899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc--cccHHHHHHHHh
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV--TENEAVIDYALK 329 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~--~ENe~vv~~~l~ 329 (384)
+|++|+|... | |.. .-...++++.+.+.| ||||+++..++|... +.-..+++.+-+
T Consensus 160 vIi~D~~~p~-~-----~~~------------~l~~~~f~~~~~~~L----kpgG~lv~~~~s~~~~~~~~~~~~~~l~~ 217 (294)
T 3adn_A 160 VIISDCTDPI-G-----PGE------------SLFTSAFYEGCKRCL----NPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp EEEECC----------------------------CCHHHHHHHHHTE----EEEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred EEEECCCCcc-C-----cch------------hccHHHHHHHHHHhc----CCCCEEEEecCCcccchHHHHHHHHHHHH
Confidence 9999987311 1 100 001245777788875 999999987766432 333334444433
Q ss_pred cC
Q 016730 330 KR 331 (384)
Q Consensus 330 ~~ 331 (384)
..
T Consensus 218 ~F 219 (294)
T 3adn_A 218 YF 219 (294)
T ss_dssp HC
T ss_pred HC
Confidence 43
No 190
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.01 E-value=3.3e-09 Score=96.96 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=95.5
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++. ...|+++|+++..++.++++. ...++.++.+|+..++. ..++||.|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~--~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF--ENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS--CTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC--CCCCccEEEE
Confidence 457889999999999999988886 358999999999999998774 34578899999988752 3478999998
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc-----------------
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT----------------- 318 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~----------------- 318 (384)
... +..-+ . ..++|..+.+.| ||||+++.++.+....
T Consensus 123 ~~~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (242)
T 3l8d_A 123 INS------LEWTE------E----------PLRALNEIKRVL----KSDGYACIAILGPTAKPRENSYPRLYGKDVVCN 176 (242)
T ss_dssp ESC------TTSSS------C----------HHHHHHHHHHHE----EEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSC
T ss_pred cCh------Hhhcc------C----------HHHHHHHHHHHh----CCCeEEEEEEcCCcchhhhhhhhhhcccccccc
Confidence 432 21111 1 135678888876 9999999988544322
Q ss_pred -ccHHHHHHHHhcCCCEEeec
Q 016730 319 -ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 -ENe~vv~~~l~~~~~~l~~~ 338 (384)
-....+..++++.|++++..
T Consensus 177 ~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 177 TMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp CCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHcCCEEEEe
Confidence 12345677788888888765
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.00 E-value=1.3e-09 Score=97.28 Aligned_cols=115 Identities=14% Similarity=0.163 Sum_probs=82.1
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
.+.++.+|||+|||+|..+..++.. +...|+++|+++.+++.+++|+. ++.++.+|+..++ +.||.|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~-----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS-----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC-----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC-----CCeeEEE
Confidence 4567899999999999999988876 33579999999999999999875 5778889987753 5799999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCC
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~ 332 (384)
+|||.... . . ...++++..+.+.+ |. +|+.|+. .....+...++..+
T Consensus 116 ~~~p~~~~-------------~-~------~~~~~~l~~~~~~~-------g~-~~~~~~~---~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 116 MNPPFGSV-------------V-K------HSDRAFIDKAFETS-------MW-IYSIGNA---KARDFLRREFSARG 162 (200)
T ss_dssp ECCCC---------------------------CHHHHHHHHHHE-------EE-EEEEEEG---GGHHHHHHHHHHHE
T ss_pred ECCCchhc-------------c-C------chhHHHHHHHHHhc-------Cc-EEEEEcC---chHHHHHHHHHHCC
Confidence 99994211 0 0 11235677777762 33 7777743 34455555555555
No 192
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.00 E-value=1.7e-09 Score=108.77 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=82.6
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHH-------HHHHHHcC--CceEEEEecCCCCcc
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSL-------TANLHRMG--VTNTIVCNYDGNELP 242 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l-------~~n~~r~g--~~~v~~~~~D~~~~~ 242 (384)
..+.+++|++|||+|||+|..+..++...+. ..|+|+|+++..++.+ +++++.+| +.++.++.+|....+
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 4456789999999999999999999998753 5899999999998888 99999999 578999887665321
Q ss_pred ccc--CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 243 KVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 243 ~~~--~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
..+ ..+.||+|+++..+ . .| ++ .+.|..+.+. |||||+||.+
T Consensus 315 ~~~~~~~~~FDvIvvn~~l--~-----~~---------d~-------~~~L~el~r~----LKpGG~lVi~ 358 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFL--F-----DE---------DL-------NKKVEKILQT----AKVGCKIISL 358 (433)
T ss_dssp HHHHHHGGGCSEEEECCTT--C-----CH---------HH-------HHHHHHHHTT----CCTTCEEEES
T ss_pred cccccccCCCCEEEEeCcc--c-----cc---------cH-------HHHHHHHHHh----CCCCeEEEEe
Confidence 000 12579999986432 0 01 11 2345666666 4999999876
No 193
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.99 E-value=1.2e-08 Score=108.79 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=83.3
Q ss_pred CCCCcccccceEEEeCCcCc---chh---hhcCCCCCceEEEeccCCChHHHHHHHHcc---------------------
Q 016730 149 IGATPEYMAGFYMLQSASSF---LPV---MALAPQEKERVIDMAAAPGGKTTYIAALMK--------------------- 201 (384)
Q Consensus 149 ~~~~~~~~~G~~~~Qd~ss~---l~~---~~L~~~~g~~VLD~cagpGgkt~~la~~~~--------------------- 201 (384)
....+.++.||-..+.++.. +++ .+....++..|||.|||+|+..+.++....
T Consensus 155 ~sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~ 234 (703)
T 3v97_A 155 LSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 234 (703)
T ss_dssp SSSSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCH
T ss_pred cCCCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCH
Confidence 34456777776544544432 222 233567889999999999999887776531
Q ss_pred --------------------CCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEEEcCCC
Q 016730 202 --------------------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 202 --------------------~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
....|+|+|+|+..++.++.|+.+.|+.+ +.+..+|+..+......+.||+|++|||.
T Consensus 235 ~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 235 AIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 12579999999999999999999999986 89999999876433222379999999997
No 194
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.98 E-value=8.9e-10 Score=105.84 Aligned_cols=136 Identities=14% Similarity=0.148 Sum_probs=91.6
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc----CCceEEEEecCCCCcccccCCCCCCE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~----g~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
.++.+|||+|||+|+.+..+++.. +...|+++|+|+..++.+++++..+ .-.++.++.+|+..+......++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 467899999999999998888653 3468999999999999999987542 23568899999887643212478999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC-CccccHHHHHHHHhcC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI-MVTENEAVIDYALKKR 331 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi-~~~ENe~vv~~~l~~~ 331 (384)
|++|++... + |. .. -.+.+++..+.+.| ||||+++..+.+. ...+....+...+++.
T Consensus 173 Ii~d~~~~~-~-----~~-------~~-----l~~~~~l~~~~~~L----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 173 VIIDTTDPA-G-----PA-------SK-----LFGEAFYKDVLRIL----KPDGICCNQGESIWLDLELIEKMSRFIRET 230 (304)
T ss_dssp EEEECC---------------------------CCHHHHHHHHHHE----EEEEEEEEEECCTTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCcc-c-----cc-------hh-----hhHHHHHHHHHHhc----CCCcEEEEecCCcccchHHHHHHHHHHHhC
Confidence 999987310 0 10 00 01245777888875 9999999876543 2223333344445555
Q ss_pred CCEE
Q 016730 332 DVKL 335 (384)
Q Consensus 332 ~~~l 335 (384)
+|..
T Consensus 231 GF~~ 234 (304)
T 3bwc_A 231 GFAS 234 (304)
T ss_dssp TCSE
T ss_pred CCCc
Confidence 5543
No 195
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.97 E-value=1.5e-09 Score=106.20 Aligned_cols=114 Identities=11% Similarity=0.037 Sum_probs=86.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
..++.+|||+|||+|..+..+++. +..+|+|+|+| ..++.++++++..|+.+ +.++.+|+..++. +.++||+|+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii 138 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL--PVEKVDIII 138 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSSCEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC--CCCceEEEE
Confidence 457899999999999999988886 34699999999 59999999999999876 8999999988742 347899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++.+..... + ... ...++..+.++| ||||+++.+.+++..
T Consensus 139 s~~~~~~l~----~--------~~~-------~~~~l~~~~r~L----kpgG~li~~~~~~~~ 178 (349)
T 3q7e_A 139 SEWMGYCLF----Y--------ESM-------LNTVLHARDKWL----APDGLIFPDRATLYV 178 (349)
T ss_dssp ECCCBBTBT----B--------TCC-------HHHHHHHHHHHE----EEEEEEESCEEEEEE
T ss_pred Ecccccccc----C--------chh-------HHHHHHHHHHhC----CCCCEEccccceEEE
Confidence 986421110 0 001 124566666775 999999877766543
No 196
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.97 E-value=4.5e-10 Score=112.09 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=69.0
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+|.+|||+|||+|..+.+++.. .+.|+++|+|+.+++.+++|++.+ |+.++.++++|+..+........||.|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 5899999999999999888765 368999999999999999999999 99899999999987522211257999999
Q ss_pred cCCCCCC
Q 016730 256 DAPCSGT 262 (384)
Q Consensus 256 DaPCSg~ 262 (384)
|||..+.
T Consensus 170 DPPrr~~ 176 (410)
T 3ll7_A 170 DPARRSG 176 (410)
T ss_dssp CCEEC--
T ss_pred CCCCcCC
Confidence 9998764
No 197
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.97 E-value=2.6e-09 Score=98.77 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=81.6
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
.+.++.+|||+|||+|..+..++.. ...|+++|+|+.+++.+++++ ..+..++.+..+|+..++ +..+.||.|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~--~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP--LPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC--SCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC--CCCCCeeEEE
Confidence 4567899999999999999988875 368999999999999999988 445567999999998765 3347899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+... + .+... ...+|..+.+.| ||||+++.+
T Consensus 110 ~~~~------l------~~~~~----------~~~~l~~~~~~L----~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHL------W------HLVPD----------WPKVLAEAIRVL----KPGGALLEG 140 (263)
T ss_dssp EESC------G------GGCTT----------HHHHHHHHHHHE----EEEEEEEEE
T ss_pred ECCc------h------hhcCC----------HHHHHHHHHHHC----CCCcEEEEE
Confidence 8532 1 11111 135678888876 999999876
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.97 E-value=1.1e-09 Score=107.13 Aligned_cols=114 Identities=15% Similarity=0.115 Sum_probs=85.7
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCC
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.+...++.+|||+|||+|..+..+++. +.++|+|+|+++ .++.++++++..|+ .++.++.+|+..++.. ++||
T Consensus 45 ~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D 118 (348)
T 2y1w_A 45 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVD 118 (348)
T ss_dssp TGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEE
T ss_pred ccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC---Ccee
Confidence 344567899999999999999888875 346999999996 88999999999998 5799999999876421 5799
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|+++.+....+ + +. ..+.+..+.+.| ||||.++.+++++.
T Consensus 119 ~Ivs~~~~~~~~----~---------~~-------~~~~l~~~~~~L----kpgG~li~~~~~~~ 159 (348)
T 2y1w_A 119 IIISEPMGYMLF----N---------ER-------MLESYLHAKKYL----KPSGNMFPTIGDVH 159 (348)
T ss_dssp EEEECCCBTTBT----T---------TS-------HHHHHHHGGGGE----EEEEEEESCEEEEE
T ss_pred EEEEeCchhcCC----h---------HH-------HHHHHHHHHhhc----CCCeEEEEecCcEE
Confidence 999986622111 0 00 123455666664 99999998777754
No 199
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.96 E-value=1.4e-08 Score=99.49 Aligned_cols=112 Identities=21% Similarity=0.133 Sum_probs=87.0
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~f 250 (384)
..++..++.+|||+|||+|..+..+++..+ ...++++|+ +..++.+++++...|+. ++.+..+|+.+. .+ ..|
T Consensus 176 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~~ 249 (374)
T 1qzz_A 176 DAYDWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---LP-VTA 249 (374)
T ss_dssp HTSCCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-CCE
T ss_pred HhCCCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CC-CCC
Confidence 344567789999999999999999999875 368999999 99999999999999986 799999998752 11 349
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
|+|++... ...+...+ ..++|.++.+.| ||||+++.+..
T Consensus 250 D~v~~~~v-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFV-------------LLNWSDED-------ALTILRGCVRAL----EPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESC-------------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEC
T ss_pred CEEEEecc-------------ccCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 99998532 11223222 246788888886 99999998776
No 200
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.96 E-value=3.9e-09 Score=96.93 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=89.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.+++.+|||+|||+|..+..+++. ...|+++|+|+..++.++++ +.++..|+..+...+..++||+|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEE
Confidence 467899999999999999988886 25799999999999988876 5677788766422234478999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc---------------ccc
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV---------------TEN 320 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~---------------~EN 320 (384)
.- ++..- ...+ ...+|..+.++| ||||+++.++..... .-.
T Consensus 108 ~~------~l~~~-------~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T 3dli_A 108 SH------FVEHL-------DPER-------LFELLSLCYSKM----KYSSYIVIESPNPTSLYSLINFYIDPTHKKPVH 163 (240)
T ss_dssp ES------CGGGS-------CGGG-------HHHHHHHHHHHB----CTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCC
T ss_pred CC------chhhC-------CcHH-------HHHHHHHHHHHc----CCCcEEEEEeCCcchhHHHHHHhcCccccccCC
Confidence 42 22111 1111 145777788875 999999998765321 112
Q ss_pred HHHHHHHHhcCCCEEeec
Q 016730 321 EAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 321 e~vv~~~l~~~~~~l~~~ 338 (384)
.+.+..++++.|++++..
T Consensus 164 ~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 164 PETLKFILEYLGFRDVKI 181 (240)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEE
Confidence 345566777778776654
No 201
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.96 E-value=2.3e-09 Score=99.28 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=93.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC---------------------------
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV--------------------------- 228 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~--------------------------- 228 (384)
..+|.+|||+|||+|..+..++.... ..|+++|+++.+++.+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 35688999999999998887765421 4899999999999999988865431
Q ss_pred --ceE-EEEecCCCCcccc--cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCC
Q 016730 229 --TNT-IVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSK 303 (384)
Q Consensus 229 --~~v-~~~~~D~~~~~~~--~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lk 303 (384)
.++ .+...|+...... ...+.||+|++.-. + ..+.........+|.++.++| |
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~------l------------~~~~~~~~~~~~~l~~~~~~L----k 189 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC------L------------DAACPDLPAYRTALRNLGSLL----K 189 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC------H------------HHHCSSHHHHHHHHHHHHTTE----E
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhh------h------------hhhcCChHHHHHHHHHHHhhC----C
Confidence 126 7888998875421 11268999997321 1 100000123456788888876 9
Q ss_pred CCcEEEEEeccC------------CccccHHHHHHHHhcCCCEEeec
Q 016730 304 SGGYIVYSTCSI------------MVTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 304 pGG~lvYsTCSi------------~~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
|||+|+.++..- ...-+++.+..++++.|++++..
T Consensus 190 pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 190 PGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 999999876321 01124556777778888887764
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.96 E-value=3.6e-10 Score=110.19 Aligned_cols=119 Identities=15% Similarity=0.212 Sum_probs=86.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCcccccCCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~--~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
..++.+|||+|||+|+.+..++...+ ..+|+++|+|+..++.+++++.++ |+ .++.++.+|+..+......++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 34568999999999999988887543 469999999999999999998875 44 46899999987653222236899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
+|++|++-. .+ +. .. -...+++..+.+.| +|||.|+..+.+...
T Consensus 197 lIi~d~~~p-~~-----~~-------~~-----l~~~~~l~~~~~~L----kpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 197 AVIVDSSDP-IG-----PA-------KE-----LFEKPFFQSVARAL----RPGGVVCTQAESLWL 240 (334)
T ss_dssp EEEECCCCT-TS-----GG-------GG-----GGSHHHHHHHHHHE----EEEEEEEEECCCTTT
T ss_pred EEEECCCCc-cC-----cc-------hh-----hhHHHHHHHHHHhc----CCCcEEEEecCCccc
Confidence 999998621 01 10 00 01246778888876 999999997655543
No 203
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.96 E-value=6e-09 Score=97.43 Aligned_cols=134 Identities=10% Similarity=0.031 Sum_probs=89.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHH-----------------cCCceEEEEecCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR-----------------MGVTNTIVCNYDG 238 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r-----------------~g~~~v~~~~~D~ 238 (384)
+.++.+|||+|||+|..+..|++. ...|+|+|+|+.+++.++++... ....++.+.++|+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 457889999999999999998885 25899999999999998765431 0124689999999
Q ss_pred CCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc
Q 016730 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (384)
Q Consensus 239 ~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ 318 (384)
..++.. ..++||.|+.-.. .-.+ ... ....++..+.++| ||||+++++|......
T Consensus 143 ~~l~~~-~~~~FD~V~~~~~---l~~l----------~~~-------~~~~~l~~~~~~L----kpGG~l~l~~~~~~~~ 197 (252)
T 2gb4_A 143 FDLPRA-NIGKFDRIWDRGA---LVAI----------NPG-------DHDRYADIILSLL----RKEFQYLVAVLSYDPT 197 (252)
T ss_dssp TTGGGG-CCCCEEEEEESSS---TTTS----------CGG-------GHHHHHHHHHHTE----EEEEEEEEEEEECCTT
T ss_pred ccCCcc-cCCCEEEEEEhhh---hhhC----------CHH-------HHHHHHHHHHHHc----CCCeEEEEEEEecCCc
Confidence 987642 1268999996321 1111 111 1235677778875 9999998766543211
Q ss_pred --------ccHHHHHHHHhcCCCEEeec
Q 016730 319 --------ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 --------ENe~vv~~~l~~~~~~l~~~ 338 (384)
-.++.+..++.. +++++..
T Consensus 198 ~~~g~~~~~~~~el~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 198 KHAGPPFYVPSAELKRLFGT-KCSMQCL 224 (252)
T ss_dssp SCCCSSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred cCCCCCCCCCHHHHHHHhhC-CeEEEEE
Confidence 123445555554 3665543
No 204
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.95 E-value=2.6e-09 Score=97.48 Aligned_cols=107 Identities=15% Similarity=0.183 Sum_probs=82.0
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..+++. ...|+++|+++.+++.+++++...+. ++.+..+|+..++. . +.||.|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI--N-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC--S-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc--c-CCceEEEEcC
Confidence 6789999999999999888776 25899999999999999999998887 78888899877652 2 6899999843
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
- ++ .+..++.+ ..++|..+.+.| ||||.++.++.
T Consensus 110 ~-----~l------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~ 143 (246)
T 1y8c_A 110 D-----ST------NYIIDSDD-------LKKYFKAVSNHL----KEGGVFIFDIN 143 (246)
T ss_dssp T-----GG------GGCCSHHH-------HHHHHHHHHTTE----EEEEEEEEEEE
T ss_pred c-----cc------cccCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 0 11 11112222 345778888876 99999998654
No 205
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.95 E-value=1.3e-08 Score=98.03 Aligned_cols=111 Identities=21% Similarity=0.136 Sum_probs=86.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.++.+|||+|||+|..+..+++..++ .+++++|++ ..++.+++++...|+. ++.+..+|....+. . ..||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPN-AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY--G-NDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC--C-SCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC--C-CCCcEEEE
Confidence 67889999999999999999998754 699999999 9999999999999986 49999999887532 2 35999998
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
--. ...++..+ ..++|.++.+.| ||||+++.......
T Consensus 239 ~~~-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 239 PNF-------------LHHFDVAT-------CEQLLRKIKTAL----AVEGKVIVFDFIPN 275 (335)
T ss_dssp ESC-------------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEECCCC
T ss_pred cch-------------hccCCHHH-------HHHHHHHHHHhC----CCCcEEEEEeecCC
Confidence 321 12222222 356788888886 99999988776554
No 206
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.95 E-value=6.4e-09 Score=99.52 Aligned_cols=113 Identities=14% Similarity=0.150 Sum_probs=83.2
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-------CCceEEEEecCCCCccc--cc--
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-------GVTNTIVCNYDGNELPK--VL-- 245 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-------g~~~v~~~~~D~~~~~~--~~-- 245 (384)
.++.+|||+|||+|..+..+++. ....|+++|+++.+++.++++.... +..++.++++|+...+. .+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36789999999999999988873 3468999999999999999998776 44578999999987641 11
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~-~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
..++||.|++.-. +.|. .+..+ ...+|..+.+.| ||||.++.+|..
T Consensus 111 ~~~~fD~V~~~~~------------l~~~~~~~~~-------~~~~l~~~~~~L----kpgG~li~~~~~ 157 (313)
T 3bgv_A 111 PQMCFDICSCQFV------------CHYSFESYEQ-------ADMMLRNACERL----SPGGYFIGTTPN 157 (313)
T ss_dssp TTCCEEEEEEETC------------GGGGGGSHHH-------HHHHHHHHHTTE----EEEEEEEEEEEC
T ss_pred CCCCEEEEEEecc------------hhhccCCHHH-------HHHHHHHHHHHh----CCCcEEEEecCC
Confidence 1258999998431 1222 12222 246778888876 999999998764
No 207
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.94 E-value=9.4e-10 Score=100.40 Aligned_cols=126 Identities=10% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++.. ..|+++|+|+..++.++++... ++.+..+|+..+. ..++||.|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~---~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ---LPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC---CSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC---cCCcccEEEEh
Confidence 467899999999999998887753 4799999999999999887643 6888889987762 24789999974
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH-HchhccCCCCcEEEEEeccCCc------------------
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMVDANSKSGGYIVYSTCSIMV------------------ 317 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~-~~L~~~lkpGG~lvYsTCSi~~------------------ 317 (384)
- ++.. ...+ .++|..+. ++| ||||+++.++.....
T Consensus 111 ~------~l~~------~~~~----------~~~l~~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (250)
T 2p7i_A 111 H------VLEH------IDDP----------VALLKRINDDWL----AEGGRLFLVCPNANAVSRQIAVKMGIISHNSAV 164 (250)
T ss_dssp S------CGGG------CSSH----------HHHHHHHHHTTE----EEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCC
T ss_pred h------HHHh------hcCH----------HHHHHHHHHHhc----CCCCEEEEEcCChHHHHHHHHHHcCccccchhc
Confidence 2 2211 1111 35778888 875 999999998854321
Q ss_pred -----------cccHHHHHHHHhcCCCEEeec
Q 016730 318 -----------TENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 318 -----------~ENe~vv~~~l~~~~~~l~~~ 338 (384)
.-+.+.+..++++.|++++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 165 TEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp CHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 114456667778888887664
No 208
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.92 E-value=6.6e-10 Score=99.56 Aligned_cols=108 Identities=12% Similarity=0.139 Sum_probs=80.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.+.++|||+|||.|..++.++...+. .+++|+|+|+.+++.+++|+.++|+. ++.+ .|.... ...+.||+||+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CCCCCcChhhH
Confidence 34679999999999999888777665 49999999999999999999999998 6776 444322 23378999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEE-EEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV-YSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lv-YsTCSi~ 316 (384)
- ++..+...++..+....+.| ||||.+| +=|-|+.
T Consensus 122 ~----------------------k~LHlL~~~~~al~~v~~~L----~pggvfISfptksl~ 157 (200)
T 3fzg_A 122 L----------------------KMLPVLKQQDVNILDFLQLF----HTQNFVISFPIKSLS 157 (200)
T ss_dssp E----------------------TCHHHHHHTTCCHHHHHHTC----EEEEEEEEEECCCCC
T ss_pred h----------------------hHHHhhhhhHHHHHHHHHHh----CCCCEEEEeChHHhc
Confidence 2 11222244555566777875 9999887 4455664
No 209
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.92 E-value=2e-09 Score=106.40 Aligned_cols=114 Identities=16% Similarity=0.100 Sum_probs=86.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
+...+|.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.+ +.++++|+..++.. ++||+
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~ 132 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP---EKVDV 132 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceE
Confidence 34567899999999999999988886 33589999999 99999999999999865 89999999876532 68999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|++++..... .+. . ....++..+.++| ||||.++.+.+++.
T Consensus 133 Iv~~~~~~~l----~~e--------~-------~~~~~l~~~~~~L----kpgG~li~~~~~~~ 173 (376)
T 3r0q_C 133 IISEWMGYFL----LRE--------S-------MFDSVISARDRWL----KPTGVMYPSHARMW 173 (376)
T ss_dssp EEECCCBTTB----TTT--------C-------THHHHHHHHHHHE----EEEEEEESSEEEEE
T ss_pred EEEcChhhcc----cch--------H-------HHHHHHHHHHhhC----CCCeEEEEecCeEE
Confidence 9997631111 000 0 0134566666765 99999998776644
No 210
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.92 E-value=1.9e-08 Score=91.57 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=79.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.+++++ .++.+..+|+..++. .+.||.|++-
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL---GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC---SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc---CCCCcEEEEc
Confidence 567899999999999999998874 37999999999999998764 457888899987653 3689999951
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
. +++ .+..++.+ ..++|..+.+.| ||||+++.+++..
T Consensus 108 ~-----~~~------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 F-----SSV------GYLKTTEE-------LGAAVASFAEHL----EPGGVVVVEPWWF 144 (239)
T ss_dssp T-----TGG------GGCCSHHH-------HHHHHHHHHHTE----EEEEEEEECCCCC
T ss_pred C-----chH------hhcCCHHH-------HHHHHHHHHHhc----CCCeEEEEEeccC
Confidence 1 111 11222222 356788888886 9999999987654
No 211
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.92 E-value=3.8e-09 Score=102.44 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=84.4
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++..|+. ++.++.+|+.+++. +.++||.|
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~D~I 109 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL--PFPKVDII 109 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC--SSSCEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC--CCCcccEE
Confidence 3457889999999999999888875 33589999999 6899999999999985 48999999987652 23689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+++++..... + ... ...++..+.++| ||||.++.+++++
T Consensus 110 vs~~~~~~l~----~--------~~~-------~~~~l~~~~~~L----kpgG~li~~~~~~ 148 (328)
T 1g6q_1 110 ISEWMGYFLL----Y--------ESM-------MDTVLYARDHYL----VEGGLIFPDKCSI 148 (328)
T ss_dssp EECCCBTTBS----T--------TCC-------HHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEeCchhhcc----c--------HHH-------HHHHHHHHHhhc----CCCeEEEEeeceE
Confidence 9987632211 0 001 123566666665 9999998666654
No 212
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.92 E-value=9.8e-10 Score=103.71 Aligned_cols=108 Identities=15% Similarity=0.097 Sum_probs=71.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHH---HHcCCceEEEE--ecCCCCcccccCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL---HRMGVTNTIVC--NYDGNELPKVLGLNTV 250 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~---~r~g~~~v~~~--~~D~~~~~~~~~~~~f 250 (384)
+++|.+|||+|||||+.|..+++. +.|+|+|+++ ++..++++. +.+| .++.++ .+|+..++ .++|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~----~~~f 141 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP----VERT 141 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC----CCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC----CCCC
Confidence 468999999999999999888876 6899999998 322111110 0111 167888 88998865 3689
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc--EEEEEec
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTC 313 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG--~lvYsTC 313 (384)
|.|++|.. ..+|. +. +... .+..+|..+.+.| |||| .++..+-
T Consensus 142 D~V~sd~~-~~~~~----~~---------~d~~--~~l~~L~~~~r~L----kpGG~~~fv~kv~ 186 (265)
T 2oxt_A 142 DVIMCDVG-ESSPK----WS---------VESE--RTIKILELLEKWK----VKNPSADFVVKVL 186 (265)
T ss_dssp SEEEECCC-CCCSC----HH---------HHHH--HHHHHHHHHHHHH----HHCTTCEEEEEES
T ss_pred cEEEEeCc-ccCCc----cc---------hhHH--HHHHHHHHHHHHh----ccCCCeEEEEEeC
Confidence 99999976 33331 11 1000 0112677777776 9999 8887553
No 213
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.91 E-value=3.6e-09 Score=96.57 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=82.2
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCC
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 249 (384)
....+...++.+|||+|||+|..+..+++. +...|+++|+++.+++.++++... .++.+...|+..++ +..+.
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~~~~~ 107 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--LPQDS 107 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--CCTTC
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--CCCCC
Confidence 344556668899999999999999988876 223899999999999999877543 36888889987765 23478
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
||.|++... +. +... ..++|..+.+.| ||||++++++
T Consensus 108 fD~v~~~~~------l~------~~~~----------~~~~l~~~~~~L----~pgG~l~~~~ 144 (243)
T 3bkw_A 108 FDLAYSSLA------LH------YVED----------VARLFRTVHQAL----SPGGHFVFST 144 (243)
T ss_dssp EEEEEEESC------GG------GCSC----------HHHHHHHHHHHE----EEEEEEEEEE
T ss_pred ceEEEEecc------cc------ccch----------HHHHHHHHHHhc----CcCcEEEEEe
Confidence 999998542 11 1111 235778888876 9999999986
No 214
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.91 E-value=3.5e-10 Score=106.37 Aligned_cols=90 Identities=19% Similarity=0.079 Sum_probs=73.2
Q ss_pred CcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCH-------HHHHHHHHHHHHcCCce-EEEEecCC
Q 016730 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA-------SRLKSLTANLHRMGVTN-TIVCNYDG 238 (384)
Q Consensus 167 s~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~-------~rl~~l~~n~~r~g~~~-v~~~~~D~ 238 (384)
..+...++.+.+|.+|||+|||+|..|..++.. .+.|+++|+++ ..++.+++|++.+|+.+ +.++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 344555566677899999999999999999885 36899999999 99999999999988866 99999998
Q ss_pred CCcccccCC--CCCCEEEEcCCC
Q 016730 239 NELPKVLGL--NTVDRVLLDAPC 259 (384)
Q Consensus 239 ~~~~~~~~~--~~fD~VllDaPC 259 (384)
..+...+.. ..||+|++|||.
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHhhhccCCCccEEEECCCC
Confidence 875322222 579999999984
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.91 E-value=1.8e-09 Score=103.81 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=83.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCcccccCCCCCCE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~--~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
.++.+|||+|||+|+.+..+++.. +..+|+++|+|+..++.+++++..+ ++ .++.++.+|+..+... ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-CCCCceE
Confidence 456899999999999998888753 3468999999999999999998763 33 5689999998764221 2368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|++|+|... + |. . .....+++..+.+.| +|||.++..+.+..
T Consensus 172 Ii~d~~~~~-~-----~~-------~-----~l~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 213 (304)
T 2o07_A 172 IITDSSDPM-G-----PA-------E-----SLFKESYYQLMKTAL----KEDGVLCCQGECQW 213 (304)
T ss_dssp EEEECC-----------------------------CHHHHHHHHHE----EEEEEEEEEEECTT
T ss_pred EEECCCCCC-C-----cc-------h-----hhhHHHHHHHHHhcc----CCCeEEEEecCCcc
Confidence 999987310 1 00 0 012346778888876 99999998875543
No 216
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.91 E-value=1.4e-09 Score=106.51 Aligned_cols=135 Identities=13% Similarity=0.108 Sum_probs=92.7
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC---Cc-----eEEEEecCCCCccccc--CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG---VT-----NTIVCNYDGNELPKVL--GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g---~~-----~v~~~~~D~~~~~~~~--~~ 247 (384)
.+.+|||+|+|.|+.+..+++.. ..+|+++|+|+..++.+++++..++ ++ ++.++.+|+..+.... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 46799999999999888877653 3689999999999999999976442 22 5889999998865421 23
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHH
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~ 327 (384)
++||+|++|+|-...| ..| ..+ ......+.++..+.+.| +|||.++.-+||.+..|--...+..
T Consensus 266 ~~fDvII~D~~d~P~~---~~p--------~~L-~t~eFy~~~~~~~~~~L----~pgGilv~qs~s~~~~e~~~~~~~~ 329 (364)
T 2qfm_A 266 REFDYVINDLTAVPIS---TSP--------EED-STWEFLRLILDLSMKVL----KQDGKYFTQGNCVNLTEALSLYEEQ 329 (364)
T ss_dssp CCEEEEEEECCSSCCC---CC-------------CHHHHHHHHHHHHHHTE----EEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred CCceEEEECCCCcccC---cCc--------hhh-hHHHHHHHHHHHHHhhC----CCCcEEEEEcCCcchHHHHHHHHHH
Confidence 6899999999731111 111 111 11234445555667775 9999999999999875554444443
Q ss_pred Hhc
Q 016730 328 LKK 330 (384)
Q Consensus 328 l~~ 330 (384)
+++
T Consensus 330 l~~ 332 (364)
T 2qfm_A 330 LGR 332 (364)
T ss_dssp HTT
T ss_pred HHH
Confidence 443
No 217
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.91 E-value=8.7e-10 Score=104.67 Aligned_cols=109 Identities=16% Similarity=0.090 Sum_probs=71.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHH---HHcCCceEEEE--ecCCCCcccccCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL---HRMGVTNTIVC--NYDGNELPKVLGLNTV 250 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~---~r~g~~~v~~~--~~D~~~~~~~~~~~~f 250 (384)
+++|.+|||+|||||+.|..+++. +.|+|+|+++ ++..++++. +.+| .++.++ .+|+..++ .++|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~----~~~f 149 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKME----PFQA 149 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGCC----CCCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhCC----CCCc
Confidence 468999999999999999988876 5799999998 322221110 0011 167888 88888765 3689
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc--EEEEEecc
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTCS 314 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG--~lvYsTCS 314 (384)
|.|++|.. ..+|. +.. + .. .+.++|..+.+.| |||| .++..+.+
T Consensus 150 D~Vvsd~~-~~~~~----~~~------d---~~--~~l~~L~~~~r~L----kpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 150 DTVLCDIG-ESNPT----AAV------E---AS--RTLTVLNVISRWL----EYNQGCGFCVKVLN 195 (276)
T ss_dssp SEEEECCC-CCCSC----HHH------H---HH--HHHHHHHHHHHHH----HHSTTCEEEEEESC
T ss_pred CEEEECCC-cCCCc----hhh------h---HH--HHHHHHHHHHHHh----ccCCCcEEEEEeCC
Confidence 99999976 33331 111 0 00 0112677777776 9999 88875543
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.90 E-value=1.9e-09 Score=104.47 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=90.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--C--CceEEEEecCCCCcccccCCCCCCE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G--VTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g--~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+|+..++.+++++..+ + -.++.++.+|+..+.... .++||+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceE
Confidence 4568999999999999988886543 469999999999999999998763 2 246899999987643211 368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC--CccccHHHHHHHHhc
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI--MVTENEAVIDYALKK 330 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi--~~~ENe~vv~~~l~~ 330 (384)
|++|++.. .| |.... .+.+++..+.+.| ||||.++..+.|. ..++...+++.+.+.
T Consensus 193 Ii~d~~~p-~~-----~~~~l------------~~~~~l~~~~~~L----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 193 IIVDSSDP-IG-----PAETL------------FNQNFYEKIYNAL----KPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp EEEECCCS-SS-----GGGGG------------SSHHHHHHHHHHE----EEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred EEECCcCC-CC-----cchhh------------hHHHHHHHHHHhc----CCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 99998521 11 11000 1246778888876 9999999876553 333334444444333
No 219
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.90 E-value=5.6e-08 Score=93.82 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=86.8
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
+..++.+|||+|||+|..+..+++..++ ..++++|+ +..++.+++++...|+ .++.+..+|.... .+ ..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p-~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LP-AGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CC-CSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CC-CCCcEE
Confidence 4456789999999999999999998764 68999999 9999999999999987 4699999998632 22 279999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
++-- +...+...+ ..++|+++.+.| ||||+|+.......
T Consensus 240 ~~~~-------------vlh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 240 VLSA-------------VLHDWDDLS-------AVAILRRCAEAA----GSGGVVLVIEAVAG 278 (332)
T ss_dssp EEES-------------CGGGSCHHH-------HHHHHHHHHHHH----TTTCEEEEEECCCC
T ss_pred EEeh-------------hhccCCHHH-------HHHHHHHHHHhc----CCCCEEEEEeecCC
Confidence 9722 122233322 356889999987 99999998776543
No 220
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=3.2e-09 Score=100.59 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=83.6
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCcccccCCCCCCEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~--~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+.+|||+|||.|+.+..++... +..+|+++|+|+..++.+++++..+ ++ .++.++.+|+..+.... .++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEE
Confidence 46799999999999988877653 3469999999999999999998664 33 46899999998643221 3689999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
++|+|.. .+. +. .+ . ..+++..+.+.| ||||.++..+.+.
T Consensus 153 i~d~~~~-~~~----~~-~l-~-----------~~~~~~~~~~~L----~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 153 MVDSTEP-VGP----AV-NL-F-----------TKGFYAGIAKAL----KEDGIFVAQTDNP 192 (275)
T ss_dssp EESCSSC-CSC----CC-CC-S-----------TTHHHHHHHHHE----EEEEEEEEECCCT
T ss_pred EECCCCC-CCc----ch-hh-h-----------HHHHHHHHHHhc----CCCcEEEEEcCCc
Confidence 9999852 121 10 11 0 124667777775 9999999887653
No 221
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.90 E-value=4.9e-08 Score=95.72 Aligned_cols=113 Identities=9% Similarity=0.024 Sum_probs=86.4
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..+.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++++...|+ .++.+..+|+......++ +.||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 45679999999999999999998754 68999999 9999999999998887 469999999887420122 57999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
--- ...+...+ ..++|+++.+.| ||||+|+.......
T Consensus 255 ~~v-------------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 255 SQF-------------LDCFSEEE-------VISILTRVAQSI----GKDSKVYIMETLWD 291 (363)
T ss_dssp ESC-------------STTSCHHH-------HHHHHHHHHHHC----CTTCEEEEEECCTT
T ss_pred ech-------------hhhCCHHH-------HHHHHHHHHHhc----CCCcEEEEEeeccC
Confidence 321 12233332 246788888885 99999998776544
No 222
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.89 E-value=5.2e-09 Score=94.11 Aligned_cols=104 Identities=17% Similarity=0.100 Sum_probs=74.9
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc--cccCCCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP--KVLGLNTVD 251 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~--~~~~~~~fD 251 (384)
+...++.+|||+|||+|..+..+++. ...|+++|+++..++.++++ .++.+...|...+. ......+||
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCcc
Confidence 34456789999999999999888876 35899999999999999877 34455566665541 112235699
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.|++..... +++ ...+|..+.++| ||||+++.++.
T Consensus 119 ~v~~~~~l~-------~~~----------------~~~~l~~~~~~L----~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALL-------HQD----------------IIELLSAMRTLL----VPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCC-------SSC----------------CHHHHHHHHHTE----EEEEEEEEEEC
T ss_pred EEEECchhh-------hhh----------------HHHHHHHHHHHh----CCCeEEEEEec
Confidence 999864421 111 124677888876 99999999875
No 223
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.89 E-value=3.6e-09 Score=107.93 Aligned_cols=112 Identities=15% Similarity=0.134 Sum_probs=83.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ .++.++.+|+.+++. + ++||+
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~--~-~~fD~ 227 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--P-EQVDI 227 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--S-SCEEE
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc--C-CCeEE
Confidence 34457889999999999999888773 346899999998 99999999999998 579999999987642 1 58999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+++++ +. ..... ...+.+..+.++| ||||+++.+.+++
T Consensus 228 Ivs~~~----~~--------~~~~e--------~~~~~l~~~~~~L----kpgG~li~~~~~~ 266 (480)
T 3b3j_A 228 IISEPM----GY--------MLFNE--------RMLESYLHAKKYL----KPSGNMFPTIGDV 266 (480)
T ss_dssp EECCCC----HH--------HHTCH--------HHHHHHHHGGGGE----EEEEEEESCEEEE
T ss_pred EEEeCc----hH--------hcCcH--------HHHHHHHHHHHhc----CCCCEEEEEecee
Confidence 998765 10 00011 1233455666664 9999999665554
No 224
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.89 E-value=3.2e-08 Score=96.67 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=88.4
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~f 250 (384)
..++..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.++++++..|+.+ +.+..+|+...+ . ..+
T Consensus 184 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~--~~~ 257 (359)
T 1x19_A 184 EEAKLDGVKKMIDVGGGIGDISAAMLKHFPE-LDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES--Y--PEA 257 (359)
T ss_dssp HHCCCTTCCEEEEESCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC--C--CCC
T ss_pred HhcCCCCCCEEEEECCcccHHHHHHHHHCCC-CeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC--C--CCC
Confidence 3445677899999999999999999998753 68999999 999999999999999875 999999998763 2 335
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+|++.-. ...+..+ ...++|+++.+.| ||||+++......
T Consensus 258 D~v~~~~v-------------lh~~~d~-------~~~~~l~~~~~~L----~pgG~l~i~e~~~ 298 (359)
T 1x19_A 258 DAVLFCRI-------------LYSANEQ-------LSTIMCKKAFDAM----RSGGRLLILDMVI 298 (359)
T ss_dssp SEEEEESC-------------GGGSCHH-------HHHHHHHHHHTTC----CTTCEEEEEEECC
T ss_pred CEEEEech-------------hccCCHH-------HHHHHHHHHHHhc----CCCCEEEEEeccc
Confidence 99998322 1223322 2356788888885 9999998777554
No 225
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=6.7e-09 Score=95.38 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=81.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc---CCCCCCE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNTVDR 252 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~---~~~~fD~ 252 (384)
+.++.+|||+|||+|..+..++.... .|+++|+|+..++.+++++ ...++.++++|+..++... ....||+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccE
Confidence 56789999999999999999998753 7999999999999999876 3457899999998864321 0124999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|++.....- ....+ ..++|..+.+.| ||||+++.+..+.
T Consensus 128 v~~~~~~~~-------------~~~~~-------~~~~l~~~~~~L----kpgG~l~i~~~~~ 166 (245)
T 3ggd_A 128 IYMRTGFHH-------------IPVEK-------RELLGQSLRILL----GKQGAMYLIELGT 166 (245)
T ss_dssp EEEESSSTT-------------SCGGG-------HHHHHHHHHHHH----TTTCEEEEEEECT
T ss_pred EEEcchhhc-------------CCHHH-------HHHHHHHHHHHc----CCCCEEEEEeCCc
Confidence 998654211 11111 245778888886 9999998887654
No 226
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.88 E-value=3.4e-09 Score=100.72 Aligned_cols=117 Identities=15% Similarity=0.206 Sum_probs=86.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC----CceEEEEecCCCCcccccCCCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG----VTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
..++.+|||+|||+|+.+..++... +..+|+++|+|+..++.+++++..++ -.++.++.+|+....... .++||
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD 153 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYD 153 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCce
Confidence 3456899999999999998887653 34699999999999999999987653 357889999987653222 36899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|++|++.. .| |... . ...+++..+.+.| +|||.++..++|..
T Consensus 154 ~Ii~d~~~~-~~-----~~~~-l-----------~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 154 VIIVDSSDP-IG-----PAET-L-----------FNQNFYEKIYNAL----KPNGYCVAQCESLW 196 (283)
T ss_dssp EEEEECCCT-TT-----GGGG-G-----------SSHHHHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEEcCCCC-CC-----cchh-h-----------hHHHHHHHHHHhc----CCCcEEEEECCCcc
Confidence 999998632 11 1100 0 1145777777875 99999999887643
No 227
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.88 E-value=3.1e-08 Score=96.48 Aligned_cols=112 Identities=20% Similarity=0.190 Sum_probs=86.8
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCC
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.++..++.+|||+|||+|..+..+++..++ ..++++|+ +..++.+++++...|+. ++.+..+|+.+. .+ ..||
T Consensus 178 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~~D 251 (360)
T 1tw3_A 178 AYDWTNVRHVLDVGGGKGGFAAAIARRAPH-VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LP-RKAD 251 (360)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-SCEE
T ss_pred hCCCccCcEEEEeCCcCcHHHHHHHHhCCC-CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CC-CCcc
Confidence 345677899999999999999999988754 68999999 99999999999999986 799999998752 11 3499
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.|++... ...+...+ ..++|+++.+.| ||||+++.+...
T Consensus 252 ~v~~~~v-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFV-------------LLNWPDHD-------AVRILTRCAEAL----EPGGRILIHERD 290 (360)
T ss_dssp EEEEESC-------------GGGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred EEEEccc-------------ccCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEEEe
Confidence 9998432 11222222 246788888886 999999988765
No 228
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.88 E-value=1.9e-09 Score=104.17 Aligned_cols=116 Identities=18% Similarity=0.184 Sum_probs=83.2
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEEecCCCCcccccCCCCCCE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g~--~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
.++.+|||+|||+|+.+..++...+ .++|+++|+|+..++.+++++..+ |+ .++.++.+|+...... ..++||+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh-cCCCceE
Confidence 3567999999999999998887543 479999999999999999998765 33 4689999998764322 2368999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
|++|++.. .| |. .. -...+++..+.+.| +|||.++..+.+..
T Consensus 185 Ii~d~~~~-~~-----~~-------~~-----l~t~~~l~~~~~~L----kpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 185 IITDSSDP-VG-----PA-------ES-----LFGQSYYELLRDAL----KEDGILSSQGESVW 226 (314)
T ss_dssp EEECCC-------------------------------HHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEcCCCC-CC-----cc-------hh-----hhHHHHHHHHHhhc----CCCeEEEEECCCcc
Confidence 99998621 00 10 00 01256788888876 99999998876654
No 229
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.86 E-value=1.7e-08 Score=107.60 Aligned_cols=116 Identities=13% Similarity=0.107 Sum_probs=87.2
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc------CCceEEEEecCCCCccccc
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM------GVTNTIVCNYDGNELPKVL 245 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~------g~~~v~~~~~D~~~~~~~~ 245 (384)
..+...++.+|||+|||+|..+..+++..+....|+|+|+++.+++.++++++.. |+.++.+..+|+..++..
T Consensus 715 elL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~- 793 (950)
T 3htx_A 715 KHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR- 793 (950)
T ss_dssp HHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT-
T ss_pred HHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc-
Confidence 3345568999999999999999888876533468999999999999999987643 677899999999987643
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+.||+|++.. ++.. .... ....++..+.+.| ||| .++.+|+.
T Consensus 794 -d~sFDlVV~~e------VLeH-------L~dp-------~l~~~L~eI~RvL----KPG-~LIISTPN 836 (950)
T 3htx_A 794 -LHDVDIGTCLE------VIEH-------MEED-------QACEFGEKVLSLF----HPK-LLIVSTPN 836 (950)
T ss_dssp -SCSCCEEEEES------CGGG-------SCHH-------HHHHHHHHHHHTT----CCS-EEEEEECB
T ss_pred -cCCeeEEEEeC------chhh-------CChH-------HHHHHHHHHHHHc----CCC-EEEEEecC
Confidence 47899999832 2221 1111 1234677888875 999 88888764
No 230
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.86 E-value=6.7e-09 Score=97.99 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=86.2
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC----ceEEEEecCCCCccc-cc
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----TNTIVCNYDGNELPK-VL 245 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~----~~v~~~~~D~~~~~~-~~ 245 (384)
...+...++.+|||+|||+|..+..++.. ...|+|+|+|+.+++.+++++...+. .++.+..+|+..++. ++
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 50 LGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 34455567899999999999999988876 24899999999999999998865443 357777888877641 12
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
..++||.|++... ++..-++... +.+ ...++|..+.+.| ||||+++.++++
T Consensus 127 ~~~~fD~V~~~g~-----~l~~~~~~~~--~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~ 177 (293)
T 3thr_A 127 AGDGFDAVICLGN-----SFAHLPDSKG--DQS-------EHRLALKNIASMV----RPGGLLVIDHRN 177 (293)
T ss_dssp CTTCEEEEEECTT-----CGGGSCCSSS--SSH-------HHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred cCCCeEEEEEcCh-----HHhhcCcccc--CHH-------HHHHHHHHHHHHc----CCCeEEEEEeCC
Confidence 3478999997311 1111111000 011 2356788888886 999999998775
No 231
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.86 E-value=9.5e-08 Score=93.87 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=88.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
++..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++++...|+ .++.+..+|.... .+ ..||+
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p-~~~D~ 271 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---IP-DGADV 271 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CC-SSCSE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CC-CCceE
Confidence 45567889999999999999999998754 68999999 9999999999999987 4699999998732 22 27999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
|++--. ...+...+ ..++|+++.+.| ||||+|+........
T Consensus 272 v~~~~v-------------lh~~~d~~-------~~~~L~~~~~~L----~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 272 YLIKHV-------------LHDWDDDD-------VVRILRRIATAM----KPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEESC-------------GGGSCHHH-------HHHHHHHHHTTC----CTTCEEEEEEEBCCS
T ss_pred EEhhhh-------------hccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 998321 12233322 246888888885 999999988766544
No 232
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.85 E-value=1.4e-08 Score=95.90 Aligned_cols=137 Identities=14% Similarity=0.086 Sum_probs=85.4
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc-----------------CC------------
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----------------GV------------ 228 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~-----------------g~------------ 228 (384)
++.+|||+|||+|. +..++.... ...|+|+|+|+.+++.++++++.. |.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 68899999999999 333333322 358999999999999998865421 10
Q ss_pred -ceEEEEecCCCC-ccc---ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCC
Q 016730 229 -TNTIVCNYDGNE-LPK---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSK 303 (384)
Q Consensus 229 -~~v~~~~~D~~~-~~~---~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lk 303 (384)
..+.++.+|+.. .+. .+..++||+|++..- + .+... -.....++|..+.++| |
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~------l------~~~~~------~~~~~~~~l~~~~r~L----k 206 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC------L------EAVSP------DLASFQRALDHITTLL----R 206 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC------H------HHHCS------SHHHHHHHHHHHHTTE----E
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhh------h------hhhcC------CHHHHHHHHHHHHHhc----C
Confidence 014566778876 331 122356999997421 0 00000 0122356788888876 9
Q ss_pred CCcEEEEEeccCC------------ccccHHHHHHHHhcCCCEEeec
Q 016730 304 SGGYIVYSTCSIM------------VTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 304 pGG~lvYsTCSi~------------~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
|||+|+.+...-. .--+++.+..++++.|++++..
T Consensus 207 pGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 207 PGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 9999998742110 0114556667777778777654
No 233
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.85 E-value=6.4e-09 Score=100.45 Aligned_cols=133 Identities=9% Similarity=0.040 Sum_probs=93.3
Q ss_pred eEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCCCC
Q 016730 181 RVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCS 260 (384)
Q Consensus 181 ~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCS 260 (384)
+|||+|||.|+.+..+++..++ .+|+++|+|+..++.+++++...+-.++.++.+|+..+......++||+|++|++..
T Consensus 92 rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred EEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 9999999999999999987654 589999999999999999876544457899999998764333346899999997632
Q ss_pred CCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccc-cHHHHHHHHhcCC-CEEe
Q 016730 261 GTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTE-NEAVIDYALKKRD-VKLV 336 (384)
Q Consensus 261 g~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~E-Ne~vv~~~l~~~~-~~l~ 336 (384)
.+. |.. .. ..+++..+.+.| +|||.++..+.+-...+ ...+++.+.+.++ +.++
T Consensus 171 -~~~----~~~--L~-----------t~efl~~~~r~L----kpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~ 226 (317)
T 3gjy_A 171 -AIT----PQN--FT-----------TVEFFEHCHRGL----APGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVI 226 (317)
T ss_dssp -SCC----CGG--GS-----------BHHHHHHHHHHE----EEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEE
T ss_pred -ccc----chh--hh-----------HHHHHHHHHHhc----CCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEE
Confidence 111 111 11 135677777775 99999998876643321 2344555555553 4443
No 234
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.85 E-value=4.4e-09 Score=101.46 Aligned_cols=118 Identities=12% Similarity=0.107 Sum_probs=84.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--C---CceEEEEecCCCCcccccCCCCCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g---~~~v~~~~~D~~~~~~~~~~~~fD 251 (384)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+|+..++.+++++..+ | -.++.++.+|+..+... ..++||
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERYD 153 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh-cCCCcc
Confidence 3567999999999999988887543 468999999999999999998762 2 35789999999874221 236899
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+|++|++... + . ..|... . ...+++..+.+.| ||||.++..+.+.
T Consensus 154 ~Ii~d~~~~~-~-~-~~~~~~-l-----------~~~~~l~~~~~~L----kpgG~lv~~~~~~ 198 (314)
T 1uir_A 154 VVIIDLTDPV-G-E-DNPARL-L-----------YTVEFYRLVKAHL----NPGGVMGMQTGMI 198 (314)
T ss_dssp EEEEECCCCB-S-T-TCGGGG-G-----------SSHHHHHHHHHTE----EEEEEEEEEEEEE
T ss_pred EEEECCCCcc-c-c-cCcchh-c-----------cHHHHHHHHHHhc----CCCcEEEEEccCc
Confidence 9999987421 0 0 011000 0 1245777788876 9999999876553
No 235
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.84 E-value=5.2e-08 Score=94.64 Aligned_cols=116 Identities=15% Similarity=0.119 Sum_probs=89.2
Q ss_pred cCCCC-CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCCC
Q 016730 174 LAPQE-KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVD 251 (384)
Q Consensus 174 L~~~~-g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~fD 251 (384)
++..+ +.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++++...++. ++.+..+|....+... .+.||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-GGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-TCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-CCCcc
Confidence 34455 789999999999999999988764 78999999 88999999999999985 4999999988764212 25699
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
+|++-- + ...+...+ ..++|+++.+.| ||||+|+.....+.
T Consensus 251 ~v~~~~------v-------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 251 VVMLND------C-------LHYFDARE-------AREVIGHAAGLV----KPGGALLILTMTMN 291 (352)
T ss_dssp EEEEES------C-------GGGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEEECCC
T ss_pred EEEEec------c-------cccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccC
Confidence 999832 1 12233332 356888888886 99999998776543
No 236
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.83 E-value=8.2e-09 Score=96.20 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=79.9
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCC
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~f 250 (384)
...+.+.++.+|||+|||+|..+..+++ ....|+++|+|+.+++.++++. ++.+...|+..++ +..++|
T Consensus 27 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~--~~~~~f 95 (261)
T 3ege_A 27 INLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA--LPDKSV 95 (261)
T ss_dssp HHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC--SCTTCB
T ss_pred HHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC--CCCCCE
Confidence 4445667899999999999999998886 3479999999998887766543 7889999998765 334789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
|.|++... + .+... ..++|..+.+.| | ||+++..++.
T Consensus 96 D~v~~~~~------l------~~~~~----------~~~~l~~~~~~L----k-gG~~~~~~~~ 132 (261)
T 3ege_A 96 DGVISILA------I------HHFSH----------LEKSFQEMQRII----R-DGTIVLLTFD 132 (261)
T ss_dssp SEEEEESC------G------GGCSS----------HHHHHHHHHHHB----C-SSCEEEEEEC
T ss_pred eEEEEcch------H------hhccC----------HHHHHHHHHHHh----C-CcEEEEEEcC
Confidence 99998532 1 11111 235778888886 9 9998888775
No 237
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.81 E-value=5.5e-09 Score=98.07 Aligned_cols=102 Identities=10% Similarity=0.115 Sum_probs=76.2
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
.+.+|||+|||+|..+..+++.. ..|+|+|+|+.+++.+++ ..++.+..+|+..++ +.+++||.|++--
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~--~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTG--LPPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCC--CCSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhc--ccCCcccEEEEee
Confidence 45799999999999998888753 589999999999877653 257899999998876 3458999999721
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++ .|. .. .+.+.++.++| ||||+|++.+.+...
T Consensus 108 ------~~------h~~-~~----------~~~~~e~~rvL----kpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 108 ------AM------HWF-DL----------DRFWAELRRVA----RPGAVFAAVTYGLTR 140 (257)
T ss_dssp ------CC------TTC-CH----------HHHHHHHHHHE----EEEEEEEEEEECCCB
T ss_pred ------eh------hHh-hH----------HHHHHHHHHHc----CCCCEEEEEECCCCC
Confidence 11 121 11 13567777775 999999988877654
No 238
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.81 E-value=8.8e-10 Score=114.10 Aligned_cols=166 Identities=17% Similarity=0.112 Sum_probs=109.2
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccC--------------CceEEEEeCCHHHHHHHHHH
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------TGLIYANEMKASRLKSLTAN 222 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~--------------~g~V~a~D~~~~rl~~l~~n 222 (384)
.|.|+--..-+.+.+.++.+++| +|||.|||+|+..+.++..+.. ...++|+|+++..+..++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 35554444555667778888877 9999999999988777655421 35799999999999999999
Q ss_pred HHHcCCce-EEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcC----CCCchhhcc--------CCHHHHHHHHHHHHH
Q 016730 223 LHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVI----SKDESVKTS--------KSLEDIQKCSYLQKQ 289 (384)
Q Consensus 223 ~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~----~r~p~~~~~--------~~~~~i~~l~~~Q~~ 289 (384)
+...|+.. +.+.++|....+. ....+||+|+.+||.+..... ..++...+. ..+. ...+..
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~-~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~-----~~~~~~ 376 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQ-HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPT-----GNANFA 376 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCS-CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCT-----TCTHHH
T ss_pred HHHhCCCcccceeccchhcCcc-cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCC-----cchhHH
Confidence 99999863 3336788765443 223689999999999764321 111111111 0011 011234
Q ss_pred HHHHHHHchhccCCCCcEEEEEecc-C-Ccc-ccHHHHH-HHHhcCCC
Q 016730 290 LILAAIDMVDANSKSGGYIVYSTCS-I-MVT-ENEAVID-YALKKRDV 333 (384)
Q Consensus 290 iL~~a~~~L~~~lkpGG~lvYsTCS-i-~~~-ENe~vv~-~~l~~~~~ 333 (384)
++.++++.| ||||++++.+-. + +.. -.+..+. +++++..+
T Consensus 377 Fl~~~l~~L----k~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 377 WMLHMLYHL----APTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp HHHHHHHTE----EEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHHh----ccCceEEEEecchhhhcCcchHHHHHHHHHhCCcH
Confidence 788889986 999998887642 2 222 2455665 66666554
No 239
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.81 E-value=8.2e-09 Score=98.85 Aligned_cols=84 Identities=14% Similarity=0.059 Sum_probs=71.6
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
..+..+++.++++|||+|||+|..|..+++. .+.|+|+|+|+..++.+++++. +..++.++++|+..++.. ..
T Consensus 41 ~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~--~~ 113 (295)
T 3gru_A 41 KAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLN--KL 113 (295)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGG--GS
T ss_pred HHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcc--cC
Confidence 3556677889999999999999999999987 3689999999999999999987 456899999999986532 25
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.||+|+.++|.
T Consensus 114 ~fD~Iv~NlPy 124 (295)
T 3gru_A 114 DFNKVVANLPY 124 (295)
T ss_dssp CCSEEEEECCG
T ss_pred CccEEEEeCcc
Confidence 79999999994
No 240
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=9.8e-09 Score=95.54 Aligned_cols=102 Identities=12% Similarity=0.144 Sum_probs=76.3
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..+++. ...|+++|+|+.+++.++++.. .+ +...|+..++ +..+.||.|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~--~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLP--FPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCC--SCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCC--CCCCCEEEEEEcc
Confidence 7889999999999999888775 3589999999999999988754 22 6678888765 2347899999743
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.. ..+.. ...++|..+.+.| ||||+++.++.+.
T Consensus 123 ~~-----------~~~~~----------~~~~~l~~~~~~L----kpgG~l~~~~~~~ 155 (260)
T 2avn_A 123 DV-----------LSYVE----------NKDKAFSEIRRVL----VPDGLLIATVDNF 155 (260)
T ss_dssp SH-----------HHHCS----------CHHHHHHHHHHHE----EEEEEEEEEEEBH
T ss_pred hh-----------hhccc----------cHHHHHHHHHHHc----CCCeEEEEEeCCh
Confidence 20 00101 1345778888876 9999999988654
No 241
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.81 E-value=1.5e-08 Score=95.99 Aligned_cols=113 Identities=10% Similarity=0.082 Sum_probs=75.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHcc---CCceE--EEEeCCHHHHHHHHHHHHHc-CCceEEEE--ecCCCCccc----
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMK---NTGLI--YANEMKASRLKSLTANLHRM-GVTNTIVC--NYDGNELPK---- 243 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~---~~g~V--~a~D~~~~rl~~l~~n~~r~-g~~~v~~~--~~D~~~~~~---- 243 (384)
+.++.+|||+|||+|..|..++..+. ....| +++|.|+.+++.+++++... ++.++.+. ..|+..++.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45788999999999988776554331 23444 99999999999999998764 66666543 444433321
Q ss_pred ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 244 VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 244 ~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+..++||+|++-.- +.|...+ .+.|..+.++| ||||+++.++.+
T Consensus 130 ~~~~~~fD~V~~~~~------------l~~~~d~----------~~~l~~~~r~L----kpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KKELQKWDFIHMIQM------------LYYVKDI----------PATLKFFHSLL----GTNAKMLIIVVS 174 (292)
T ss_dssp TTCCCCEEEEEEESC------------GGGCSCH----------HHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ccCCCceeEEEEeee------------eeecCCH----------HHHHHHHHHHc----CCCcEEEEEEec
Confidence 023478999997321 1222222 34677788875 999999987644
No 242
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.80 E-value=4.9e-09 Score=98.53 Aligned_cols=89 Identities=15% Similarity=0.032 Sum_probs=71.5
Q ss_pred CcchhhhcCCCCC--ceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC--------C-ceEEEEe
Q 016730 167 SFLPVMALAPQEK--ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG--------V-TNTIVCN 235 (384)
Q Consensus 167 s~l~~~~L~~~~g--~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g--------~-~~v~~~~ 235 (384)
......++.+++| .+|||+|||.|..++.++.. .+.|+++|+++..+..+++++++.+ + .++.+++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 3455666777777 99999999999999999987 2579999999999888888887653 4 5689999
Q ss_pred cCCCCcccccCCCCCCEEEEcCCC
Q 016730 236 YDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 236 ~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
+|+..+...+. ..||+|++|||.
T Consensus 152 ~D~~~~L~~~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 152 ASSLTALTDIT-PRPQVVYLDPMF 174 (258)
T ss_dssp SCHHHHSTTCS-SCCSEEEECCCC
T ss_pred CCHHHHHHhCc-ccCCEEEEcCCC
Confidence 99887533232 369999999995
No 243
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.80 E-value=3.4e-08 Score=88.93 Aligned_cols=102 Identities=16% Similarity=0.100 Sum_probs=75.0
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++. + ..|+++|+++..++.++++.. .+...|+......+..++||.|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCCCCCCCccCEEEEC
Confidence 67889999999999999988876 3 789999999999988876542 4667888764333344789999985
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.. +.. ...+ .++|..+.+.| ||||+++.++..
T Consensus 101 ~~------l~~------~~~~----------~~~l~~~~~~L----~~gG~l~~~~~~ 132 (230)
T 3cc8_A 101 DV------LEH------LFDP----------WAVIEKVKPYI----KQNGVILASIPN 132 (230)
T ss_dssp SC------GGG------SSCH----------HHHHHHTGGGE----EEEEEEEEEEEC
T ss_pred Ch------hhh------cCCH----------HHHHHHHHHHc----CCCCEEEEEeCC
Confidence 32 111 1111 25677777775 999999998744
No 244
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.78 E-value=1.8e-08 Score=90.23 Aligned_cols=100 Identities=18% Similarity=0.167 Sum_probs=75.5
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..+ +...|+++|+++.+++.+++++ .++.+...|+..++ +..++||.|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP--FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC--SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC--CCCCcEEEEEEcC
Confidence 7889999999999987765 2238999999999999998876 46778889988765 2346899999853
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
. +..-+ . ..++|..+.++| ||||+++.++..-
T Consensus 104 ~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 T------LEFVE------D----------VERVLLEARRVL----RPGGALVVGVLEA 135 (211)
T ss_dssp C------TTTCS------C----------HHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred h------hhhcC------C----------HHHHHHHHHHHc----CCCCEEEEEecCC
Confidence 2 11111 1 135778888876 9999999987543
No 245
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.78 E-value=1.9e-08 Score=103.75 Aligned_cols=169 Identities=17% Similarity=0.170 Sum_probs=111.0
Q ss_pred cceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccC------------CceEEEEeCCHHHHHHHHHHHH
Q 016730 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN------------TGLIYANEMKASRLKSLTANLH 224 (384)
Q Consensus 157 ~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~------------~g~V~a~D~~~~rl~~l~~n~~ 224 (384)
.|.|+-=..-+.+.+.++.|++|++|+|-|||+||.-+.+...+.. ...++++|+++.....++-|+-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 4655444444567788899999999999999999988776665432 2469999999999999999998
Q ss_pred HcCCceEEEEecCCCCcccc--cCCCCCCEEEEcCCCCCCCc---CCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchh
Q 016730 225 RMGVTNTIVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGV---ISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (384)
Q Consensus 225 r~g~~~v~~~~~D~~~~~~~--~~~~~fD~VllDaPCSg~G~---~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~ 299 (384)
-.|+....+..+|....+.. ....+||+|+.+||.++..- ..+.|... ..+ ..+.-.+.+++..|.
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~-~~~--------~~~~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDM-QTA--------ETAMLFLQLIMRKLK 346 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGG-CCC--------BHHHHHHHHHHHHBC
T ss_pred hcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhc-ccc--------hhHHHHHHHHHHHhh
Confidence 88987666777887654321 12257999999999975421 11111110 011 123345667776651
Q ss_pred ---ccCCCCcEEEEEecc--CCccccHHHHH-HHHhcCCCE
Q 016730 300 ---ANSKSGGYIVYSTCS--IMVTENEAVID-YALKKRDVK 334 (384)
Q Consensus 300 ---~~lkpGG~lvYsTCS--i~~~ENe~vv~-~~l~~~~~~ 334 (384)
..+++||++++.+-. ++..-.+.-|. +++++..++
T Consensus 347 ~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 347 RPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLH 387 (530)
T ss_dssp CTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSEEE
T ss_pred hhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCEEE
Confidence 112479999887652 33333344565 777776543
No 246
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.78 E-value=6.9e-08 Score=93.06 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=85.1
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
+..+ .+|||+|||+|..+..+++..++ .+++++|+ +..++.+++++...|+ .++.+..+|... + .+ ..||+|
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~~-~~~D~v 237 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPS-ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E--VP-SNGDIY 237 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C--CC-SSCSEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C--CC-CCCCEE
Confidence 4445 89999999999999999988754 68999999 9999999999988876 468999999876 2 22 579999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
++.-. ...+...+ ..++|+++.+.| ||||+++......
T Consensus 238 ~~~~v-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 238 LLSRI-------------IGDLDEAA-------SLRLLGNCREAM----AGDGRVVVIERTI 275 (334)
T ss_dssp EEESC-------------GGGCCHHH-------HHHHHHHHHHHS----CTTCEEEEEECCB
T ss_pred EEchh-------------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEecc
Confidence 97422 22233332 256888888885 9999999887554
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.78 E-value=1.5e-10 Score=107.49 Aligned_cols=96 Identities=13% Similarity=0.118 Sum_probs=75.7
Q ss_pred EEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 016730 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (384)
Q Consensus 160 ~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~ 239 (384)
|..+..-....+..+++.++++|||+|||+|..|..+++.. +.|+|+|+|+..++.+++++. +..++.++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 44455444556667778899999999999999999999873 689999999999998888775 4568999999998
Q ss_pred CcccccCCCCCCEEEEcCCCCCC
Q 016730 240 ELPKVLGLNTVDRVLLDAPCSGT 262 (384)
Q Consensus 240 ~~~~~~~~~~fD~VllDaPCSg~ 262 (384)
.++.. ..+.| .|++|+|+..+
T Consensus 86 ~~~~~-~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 86 QFQFP-NKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTCC-CSSEE-EEEEECCSSSC
T ss_pred hcCcc-cCCCc-EEEEeCCcccc
Confidence 87521 12568 89999997544
No 248
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.77 E-value=1e-08 Score=95.62 Aligned_cols=98 Identities=15% Similarity=0.215 Sum_probs=76.0
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++.++ ...|+++|+++.+++.++++. .++.+...|+..++. ..++||.|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~--~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF--SDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB--CTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC--CCCceeEEEEe
Confidence 5788999999999999999998764 368999999999999988764 356778889887652 34689999973
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.. + ..+..+.++| ||||+++.++...
T Consensus 156 ~~----------~-------------------~~l~~~~~~L----~pgG~l~~~~~~~ 181 (269)
T 1p91_A 156 YA----------P-------------------CKAEELARVV----KPGGWVITATPGP 181 (269)
T ss_dssp SC----------C-------------------CCHHHHHHHE----EEEEEEEEEEECT
T ss_pred CC----------h-------------------hhHHHHHHhc----CCCcEEEEEEcCH
Confidence 21 0 1246666765 9999999987543
No 249
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.75 E-value=1.3e-08 Score=100.59 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=82.2
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
-+|.+|||+|||+|..++.+|+. +..+|+|+|.|+ .++.++++++.+|+.+ |.++++|..++... ++||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp---e~~Dvivs 155 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP---EQVDAIVS 155 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC---ccccEEEe
Confidence 36899999999999988766654 345899999996 7899999999999965 89999999887532 68999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC--ccccH
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENE 321 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~--~~ENe 321 (384)
+.- +.+.+.. ..+ ..++...-++ |||||.++-+.|+++ +-|.+
T Consensus 156 E~~--~~~l~~e----------~~l-------~~~l~a~~r~----Lkp~G~~iP~~atly~apie~~ 200 (376)
T 4hc4_A 156 EWM--GYGLLHE----------SML-------SSVLHARTKW----LKEGGLLLPASAELFIVPISDQ 200 (376)
T ss_dssp CCC--BTTBTTT----------CSH-------HHHHHHHHHH----EEEEEEEESCEEEEEEEEECCH
T ss_pred ecc--ccccccc----------chh-------hhHHHHHHhh----CCCCceECCccceEEEEEeccc
Confidence 642 2222111 111 1233333344 599999997777755 34543
No 250
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.70 E-value=1.1e-08 Score=96.20 Aligned_cols=100 Identities=11% Similarity=-0.022 Sum_probs=77.7
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc----CCceEEEEecCCCCcccccCCCCCCEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~----g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+.+|||+|||.|+.+..++.. + .+|+++|+|+..++.+++++..+ .-.++.++.+|+..+. ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEE
Confidence 4579999999999998888776 3 79999999999999998876432 2246888899988754 579999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
++|++ +|. .++..+.+.| ||||.++..+++..
T Consensus 144 i~d~~---------dp~------------------~~~~~~~~~L----~pgG~lv~~~~~~~ 175 (262)
T 2cmg_A 144 FCLQE---------PDI------------------HRIDGLKRML----KEDGVFISVAKHPL 175 (262)
T ss_dssp EESSC---------CCH------------------HHHHHHHTTE----EEEEEEEEEEECTT
T ss_pred EECCC---------ChH------------------HHHHHHHHhc----CCCcEEEEEcCCcc
Confidence 99954 221 0566667765 99999998876643
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.69 E-value=2.2e-07 Score=83.97 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=84.7
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
++.+|||+|||+|..+..++.. +++|+++..++.++++ ++.+...|+..++ ...+.||+|++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~v~~~~ 110 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLP--LKDESFDFALMVT 110 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCC--SCTTCEEEEEEES
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCC--CCCCCeeEEEEcc
Confidence 3789999999999988765432 9999999999998876 4667788887765 2346899999853
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc-------------------
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------------------- 318 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~------------------- 318 (384)
. +. +... ..++|..+.+.| +|||.++.++......
T Consensus 111 ~------l~------~~~~----------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (219)
T 1vlm_A 111 T------IC------FVDD----------PERALKEAYRIL----KKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNAR 164 (219)
T ss_dssp C------GG------GSSC----------HHHHHHHHHHHE----EEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCC
T ss_pred h------Hh------hccC----------HHHHHHHHHHHc----CCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccc
Confidence 2 11 1111 135777888876 9999999987543211
Q ss_pred -ccHHHHHHHHhcCCCEEeec
Q 016730 319 -ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 -ENe~vv~~~l~~~~~~l~~~ 338 (384)
-+.+.+..++++.|++++..
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEE
Confidence 14456667777888887665
No 252
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.68 E-value=1.4e-07 Score=85.39 Aligned_cols=116 Identities=19% Similarity=0.154 Sum_probs=82.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCc------------
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNEL------------ 241 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~---~~v~~~~~D~~~~------------ 241 (384)
++..+||++|+ |+-|+.+|++ . .++|+++|.++++.+.+++++++.|+ +++.+..+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 35679999997 6777777763 3 58999999999999999999999995 5788999997643
Q ss_pred ---ccc------c-CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 242 ---PKV------L-GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 242 ---~~~------~-~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+.. . ..+.||.|++|+. + . + .-+..++++| +|||+|+.-
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~-------------k----~---------~-~~~~~~l~~l----~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR-------------F----R---------V-GCALATAFSI----TRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS-------------S----H---------H-HHHHHHHHHC----SSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC-------------C----c---------h-hHHHHHHHhc----CCCeEEEEe
Confidence 110 1 1268999999985 0 0 0 2234466664 999999765
Q ss_pred eccCCccccHHHHHHHHh
Q 016730 312 TCSIMVTENEAVIDYALK 329 (384)
Q Consensus 312 TCSi~~~ENe~vv~~~l~ 329 (384)
..+.. .....|..+++
T Consensus 154 Nv~~r--~~y~~v~~~~~ 169 (202)
T 3cvo_A 154 DYSQR--RWQHQVEEFLG 169 (202)
T ss_dssp TGGGC--SSGGGGHHHHC
T ss_pred CCcCC--cchHHHHHHHh
Confidence 43333 33455566665
No 253
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.65 E-value=2.2e-07 Score=87.68 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=78.8
Q ss_pred CCceEEEeccCC---ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc---------cc
Q 016730 178 EKERVIDMAAAP---GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---------VL 245 (384)
Q Consensus 178 ~g~~VLD~cagp---Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~---------~~ 245 (384)
+..+|||+|||+ |..+..+++..+ .++|+++|+|+.+++.+++++.. ..++.++.+|+.+... .+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccC
Confidence 447999999999 976655545443 47999999999999999998843 3468999999986421 12
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+...||.|++.. ++. +. ..++ ...+|.++.+.| ||||+|+.++.+.
T Consensus 154 d~~~~d~v~~~~------vlh------~~-~d~~-------~~~~l~~~~~~L----~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 DFSRPAAIMLVG------MLH------YL-SPDV-------VDRVVGAYRDAL----APGSYLFMTSLVD 199 (274)
T ss_dssp CTTSCCEEEETT------TGG------GS-CTTT-------HHHHHHHHHHHS----CTTCEEEEEEEBC
T ss_pred CCCCCEEEEEec------hhh------hC-CcHH-------HHHHHHHHHHhC----CCCcEEEEEEecC
Confidence 235799998732 221 11 1111 245788888875 9999999988665
No 254
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.65 E-value=9.3e-08 Score=101.76 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=92.5
Q ss_pred CCCceEEEeccCCChHHHHHHHHccC--CceEEEEeCCHHHHHHH--HHHHHH----cCCceEEEEecCCCCcccccCCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSL--TANLHR----MGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~--~g~V~a~D~~~~rl~~l--~~n~~r----~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
.++.+|||.|||+|+....++..++. ...++|+|+++..+..+ +.|+.. .|+.+..+...|...... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~-~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP-EDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-GGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-cccC
Confidence 36889999999999999888887642 35799999999999988 666554 344444555555554321 1236
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH-----------HHHHHHHHHHHHHHchhccCCCCcEEEEEecc-CC
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK-----------CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS-IM 316 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~-----------l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS-i~ 316 (384)
+||+|++|||.++.... +..... ....+.. .......++.+++++| ++||++++.+-+ +.
T Consensus 399 kFDVVIgNPPYg~~~~~---~~e~kd-~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lL----KpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTD---PAIKRK-FAHKIIQLTGNRPQTLFGQIGVEALFLELVTELV----QDGTVISAIMPKQYL 470 (878)
T ss_dssp TEEEEEECCBCCSSCCC---HHHHHH-HHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHS----CTTCEEEEEEETHHH
T ss_pred CCCEEEECCCccccccc---hhhhhh-HHHHhhhhccccccccccccchHHHHHHHHHHhc----CCCcEEEEEEChHHh
Confidence 89999999998653221 110000 0000000 0123566889999986 999999987654 33
Q ss_pred ccc--cHHHHH-HHHhcCCC
Q 016730 317 VTE--NEAVID-YALKKRDV 333 (384)
Q Consensus 317 ~~E--Ne~vv~-~~l~~~~~ 333 (384)
... ...-+. +++++..+
T Consensus 471 f~sg~~~kkLRk~LLe~~~I 490 (878)
T 3s1s_A 471 TAQGNESKAFREFLVGNFGL 490 (878)
T ss_dssp HCCSHHHHHHHHHHTTTTCE
T ss_pred ccCChHHHHHHHHHHhCCCe
Confidence 211 244455 55666554
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.63 E-value=3.5e-08 Score=92.49 Aligned_cols=85 Identities=15% Similarity=0.208 Sum_probs=69.5
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--cC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LG 246 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--~~ 246 (384)
..+..+++.+|++|||+|||+|..|..+++.. +.|+|+|+|+.+++.+++++.. ..++.++++|+..++.. ..
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHhcCCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhcc
Confidence 35666788899999999999999999888753 6899999999999999999865 45799999999987421 11
Q ss_pred CCCCCEEEEcCCC
Q 016730 247 LNTVDRVLLDAPC 259 (384)
Q Consensus 247 ~~~fD~VllDaPC 259 (384)
+..|| |+.|+|.
T Consensus 95 ~~~~~-vv~NlPY 106 (255)
T 3tqs_A 95 DKPLR-VVGNLPY 106 (255)
T ss_dssp SSCEE-EEEECCH
T ss_pred CCCeE-EEecCCc
Confidence 35688 8899993
No 256
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.60 E-value=2.6e-08 Score=94.16 Aligned_cols=85 Identities=20% Similarity=0.211 Sum_probs=71.7
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc---C
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---G 246 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~---~ 246 (384)
++..|++++|..+||+++|.||.|..|++. .++|+|+|.|+..++.+++ ++. .++.+++++..++.... .
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcC
Confidence 345678899999999999999999999997 4899999999999999988 644 57999999998875432 2
Q ss_pred CCCCCEEEEcCCCCC
Q 016730 247 LNTVDRVLLDAPCSG 261 (384)
Q Consensus 247 ~~~fD~VllDaPCSg 261 (384)
..+||.||+|.++|+
T Consensus 87 ~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 87 VERVDGILADLGVSS 101 (285)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCcCEEEeCCcccc
Confidence 257999999999887
No 257
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.59 E-value=1.1e-07 Score=89.87 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=79.7
Q ss_pred CceEEEeccCC--ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccC----CCCCC-
Q 016730 179 KERVIDMAAAP--GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG----LNTVD- 251 (384)
Q Consensus 179 g~~VLD~cagp--Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~----~~~fD- 251 (384)
..+|||+|||+ |+.+..+++...+..+|+++|.|+.++..++.++...+..++.++.+|++.+...+. .+.||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 36899999997 566777777665568999999999999999998865544579999999998632111 13455
Q ss_pred ----EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 252 ----RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 252 ----~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
.|++.+ + +.|....++ ...++....+.| +|||+|+.++-+-
T Consensus 159 ~~p~av~~~a------v------LH~l~d~~~-------p~~~l~~l~~~L----~PGG~Lvls~~~~ 203 (277)
T 3giw_A 159 TRPVALTVIA------I------VHFVLDEDD-------AVGIVRRLLEPL----PSGSYLAMSIGTA 203 (277)
T ss_dssp TSCCEEEEES------C------GGGSCGGGC-------HHHHHHHHHTTS----CTTCEEEEEEECC
T ss_pred CCcchHHhhh------h------HhcCCchhh-------HHHHHHHHHHhC----CCCcEEEEEeccC
Confidence 466543 2 123222111 245777778875 9999999997654
No 258
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.57 E-value=6.3e-08 Score=96.05 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=74.0
Q ss_pred CCceEEEeccC------CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc----cCC
Q 016730 178 EKERVIDMAAA------PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGL 247 (384)
Q Consensus 178 ~g~~VLD~cag------pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~----~~~ 247 (384)
++.+|||+||| +||.++.++....+.+.|+++|+++.+. ....++.++.+|+.+++.. ...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 56899999999 7888888887653458999999999862 2346799999999886432 002
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
++||+|++|.- . .. ..+.+.|..++++| ||||+++.....
T Consensus 287 ~sFDlVisdgs--------H--------~~-------~d~~~aL~el~rvL----KPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDGS--------H--------IN-------AHVRTSFAALFPHV----RPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECSC--------C--------CH-------HHHHHHHHHHGGGE----EEEEEEEEECGG
T ss_pred CCccEEEECCc--------c--------cc-------hhHHHHHHHHHHhc----CCCeEEEEEecc
Confidence 68999998742 0 01 12356778888876 999999998554
No 259
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.55 E-value=1.1e-07 Score=85.43 Aligned_cols=112 Identities=17% Similarity=0.170 Sum_probs=80.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..++ ..|+++|+++. ++.+..+|+..++ +..+.||.|++
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~--~~~~~fD~v~~ 121 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVP--LEDESVDVAVF 121 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCS--CCTTCEEEEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCC--CCCCCEeEEEE
Confidence 4577899999999999876552 57999999987 3456678887754 23468999998
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEE
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l 335 (384)
... +. ++ . ...+|..+.++| +|||+++.+++... ..+.+.+..+++..++++
T Consensus 122 ~~~------l~-~~------~----------~~~~l~~~~~~L----~~gG~l~i~~~~~~-~~~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 122 CLS------LM-GT------N----------IRDFLEEANRVL----KPGGLLKVAEVSSR-FEDVRTFLRAVTKLGFKI 173 (215)
T ss_dssp ESC------CC-SS------C----------HHHHHHHHHHHE----EEEEEEEEEECGGG-CSCHHHHHHHHHHTTEEE
T ss_pred ehh------cc-cc------C----------HHHHHHHHHHhC----CCCeEEEEEEcCCC-CCCHHHHHHHHHHCCCEE
Confidence 432 11 11 1 135677777875 99999999876532 235666777888889887
Q ss_pred eec
Q 016730 336 VPC 338 (384)
Q Consensus 336 ~~~ 338 (384)
+..
T Consensus 174 ~~~ 176 (215)
T 2zfu_A 174 VSK 176 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 260
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.55 E-value=4.4e-07 Score=88.22 Aligned_cols=111 Identities=14% Similarity=0.006 Sum_probs=77.6
Q ss_pred hhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCcccccCCCCC
Q 016730 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 172 ~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~f 250 (384)
..++..++.+|||+|||+|..+..+++..++ ..++++|+ +..+. ++++++.+.. ++.+..+|+... .+ .|
T Consensus 178 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~---~p--~~ 248 (348)
T 3lst_A 178 RAGDFPATGTVADVGGGRGGFLLTVLREHPG-LQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE---VP--HA 248 (348)
T ss_dssp HHSCCCSSEEEEEETCTTSHHHHHHHHHCTT-EEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---CC--CC
T ss_pred HhCCccCCceEEEECCccCHHHHHHHHHCCC-CEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---CC--CC
Confidence 3345677899999999999999999998764 68999999 44443 3333334443 589999998621 22 79
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
|+|++--- ...+...+ ..++|+++.+.| ||||+|+......
T Consensus 249 D~v~~~~v-------------lh~~~d~~-------~~~~L~~~~~~L----kpgG~l~i~e~~~ 289 (348)
T 3lst_A 249 DVHVLKRI-------------LHNWGDED-------SVRILTNCRRVM----PAHGRVLVIDAVV 289 (348)
T ss_dssp SEEEEESC-------------GGGSCHHH-------HHHHHHHHHHTC----CTTCEEEEEECCB
T ss_pred cEEEEehh-------------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEecc
Confidence 99997321 22233332 246888888886 9999999877544
No 261
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.54 E-value=2.5e-07 Score=87.62 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=75.4
Q ss_pred CceEEEeccCCCh----HHHHHHHHccC---CceEEEEeCCHHHHHHHHHHHH--------------Hc---------C-
Q 016730 179 KERVIDMAAAPGG----KTTYIAALMKN---TGLIYANEMKASRLKSLTANLH--------------RM---------G- 227 (384)
Q Consensus 179 g~~VLD~cagpGg----kt~~la~~~~~---~g~V~a~D~~~~rl~~l~~n~~--------------r~---------g- 227 (384)
+.+|||+|||+|- .++.+++.++. ...|+|+|+|+.+++.+++++- ++ |
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5689999999998 55566666542 2489999999999999998741 10 1
Q ss_pred --C-----ceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhc
Q 016730 228 --V-----TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDA 300 (384)
Q Consensus 228 --~-----~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~ 300 (384)
+ .+|.+...|....+.. ..+.||+|+|- .+ .....+. .|++++....+.|
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~cr------nv-------liyf~~~-------~~~~vl~~~~~~L-- 242 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCR------NV-------MIYFDKT-------TQEDILRRFVPLL-- 242 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEEC------SS-------GGGSCHH-------HHHHHHHHHGGGE--
T ss_pred eeechhhcccCeEEecccCCCCCC-cCCCeeEEEEC------Cc-------hHhCCHH-------HHHHHHHHHHHHh--
Confidence 1 2588888998874311 13689999981 11 1112222 3678899988886
Q ss_pred cCCCCcEEEEE
Q 016730 301 NSKSGGYIVYS 311 (384)
Q Consensus 301 ~lkpGG~lvYs 311 (384)
+|||+|+..
T Consensus 243 --~pgG~L~lg 251 (274)
T 1af7_A 243 --KPDGLLFAG 251 (274)
T ss_dssp --EEEEEEEEC
T ss_pred --CCCcEEEEE
Confidence 999999863
No 262
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.53 E-value=1.8e-07 Score=87.69 Aligned_cols=131 Identities=18% Similarity=0.135 Sum_probs=88.6
Q ss_pred CCCCceEEEeccCCChHHHHHHHHc------cC-----CceEEEEeCCH---HHHH-----------HHHHHHHH-----
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALM------KN-----TGLIYANEMKA---SRLK-----------SLTANLHR----- 225 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~------~~-----~g~V~a~D~~~---~rl~-----------~l~~n~~r----- 225 (384)
.+++.+|||+|+|+|.-++.+++.. .+ ...++++|.++ +.+. .++++++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999988877754 33 25899999876 5544 34555554
Q ss_pred -------c--CCceEEEEecCCCCcccccCC---CCCCEEEEcC--CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHH
Q 016730 226 -------M--GVTNTIVCNYDGNELPKVLGL---NTVDRVLLDA--PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI 291 (384)
Q Consensus 226 -------~--g~~~v~~~~~D~~~~~~~~~~---~~fD~VllDa--PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL 291 (384)
+ |..++.+..+|+.+....... ..||+|++|+ | .++|++ |+ .+++
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp-------~~~p~l---w~-----------~~~l 196 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAP-------AKNPDM---WT-----------QNLF 196 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCT-------TTCGGG---CC-----------HHHH
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCc-------ccChhh---cC-----------HHHH
Confidence 1 224677889999874322221 2799999997 4 346643 22 3467
Q ss_pred HHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEEeec
Q 016730 292 LAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 292 ~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
....+.| +|||+|+.-|++ ..|...|...+|++...
T Consensus 197 ~~l~~~L----~pGG~l~tysaa-------~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 197 NAMARLA----RPGGTLATFTSA-------GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp HHHHHHE----EEEEEEEESCCB-------HHHHHHHHHHTEEEEEE
T ss_pred HHHHHHc----CCCcEEEEEeCC-------HHHHHHHHHCCCEEEeC
Confidence 7777775 999999843332 36777777778887654
No 263
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.52 E-value=4.5e-08 Score=90.91 Aligned_cols=77 Identities=19% Similarity=0.207 Sum_probs=52.1
Q ss_pred CCCCceEEEeccCCChHHHHHHHH--ccC-CceEEEEeC--CHHHHHHHHHHHHHcCCceEEEEec-CCCCcccccCCCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAAL--MKN-TGLIYANEM--KASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNT 249 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~--~~~-~g~V~a~D~--~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~~~~~~~ 249 (384)
++||.+|||+||||||.+..++++ ++. .|.|+|+|+ .+-.. .-.|+.-+.+..+ |.+.+. ..+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~----~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP----SEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC----CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC----CCC
Confidence 578999999999999999999887 432 467788873 22100 0024333455556 887643 358
Q ss_pred CCEEEEcCCCCCCCc
Q 016730 250 VDRVLLDAPCSGTGV 264 (384)
Q Consensus 250 fD~VllDaPCSg~G~ 264 (384)
||+||+|..-+ +|.
T Consensus 140 ~DvVLSDMAPn-SG~ 153 (269)
T 2px2_A 140 SDTLLCDIGES-SPS 153 (269)
T ss_dssp CSEEEECCCCC-CSC
T ss_pred CCEEEeCCCCC-CCc
Confidence 99999997555 764
No 264
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.51 E-value=1.7e-07 Score=89.41 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=66.2
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc-ccCCCCCCEEEEc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLD 256 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~-~~~~~~fD~VllD 256 (384)
+|.+|||+|||+|+.|..+++. +.+.|+|+|+++.+++...++ ....+.....+++.+.. .++...||.|++|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEEEE
Confidence 5789999999999999988886 346999999999998763322 11111222233333221 1222459999998
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
...... ..+|..+.++| ||||+++..
T Consensus 159 ~sf~sl-------------------------~~vL~e~~rvL----kpGG~lv~l 184 (291)
T 3hp7_A 159 VSFISL-------------------------NLILPALAKIL----VDGGQVVAL 184 (291)
T ss_dssp CSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEE
T ss_pred eeHhhH-------------------------HHHHHHHHHHc----CcCCEEEEE
Confidence 753211 33677777875 999999986
No 265
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.51 E-value=1.2e-07 Score=88.08 Aligned_cols=85 Identities=14% Similarity=0.102 Sum_probs=68.1
Q ss_pred cchhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCC
Q 016730 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (384)
Q Consensus 168 ~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~ 247 (384)
...+..+++.++++|||+|||+|..|..+++.. +.|+|+|+|+.+++.+++++.. ..++.++++|+..++... .
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~~-~ 93 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFPK-N 93 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCCS-S
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCccc-C
Confidence 334555677889999999999999999999874 6899999999999999998864 357999999998765321 1
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
..| .|+.|+|.
T Consensus 94 ~~~-~vv~nlPy 104 (244)
T 1qam_A 94 QSY-KIFGNIPY 104 (244)
T ss_dssp CCC-EEEEECCG
T ss_pred CCe-EEEEeCCc
Confidence 345 78999994
No 266
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.51 E-value=8.2e-08 Score=92.80 Aligned_cols=89 Identities=17% Similarity=0.180 Sum_probs=73.2
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCC--
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL-- 247 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~-- 247 (384)
++.+|.++||..++|+++|.||.|..|++.+++.|+|+|+|.++..++.++ + +.-.++.+++++..++......
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-r---L~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-T---IDDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-T---CCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-h---hcCCcEEEEeCCHHHHHHHHHhcC
Confidence 445678899999999999999999999999887899999999999999873 3 3345788999988877543311
Q ss_pred --CCCCEEEEcCCCCCC
Q 016730 248 --NTVDRVLLDAPCSGT 262 (384)
Q Consensus 248 --~~fD~VllDaPCSg~ 262 (384)
+++|.||+|-.||+.
T Consensus 125 ~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 125 LIGKIDGILLDLGVSSP 141 (347)
T ss_dssp CTTCEEEEEEECSCCHH
T ss_pred CCCcccEEEECCccCHH
Confidence 269999999999975
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.49 E-value=1.9e-07 Score=88.61 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=68.2
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--c
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--L 245 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--~ 245 (384)
..+..+++.++++|||+|||+|..|..+++.... .+.|+|+|+|+.+++.++++. ..++.++++|+..++.. .
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~~~~ 108 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFGSIA 108 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGGGGS
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChhHhc
Confidence 3456677889999999999999999999988643 356999999999999999983 45799999999876421 1
Q ss_pred CCC--CCCEEEEcCCC
Q 016730 246 GLN--TVDRVLLDAPC 259 (384)
Q Consensus 246 ~~~--~fD~VllDaPC 259 (384)
... ..+.|+.++|.
T Consensus 109 ~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 109 RPGDEPSLRIIGNLPY 124 (279)
T ss_dssp CSSSSCCEEEEEECCH
T ss_pred ccccCCceEEEEccCc
Confidence 101 34579999993
No 268
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.49 E-value=1.1e-07 Score=87.74 Aligned_cols=100 Identities=11% Similarity=0.166 Sum_probs=66.3
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc-cccCCCCCCEEEEc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP-KVLGLNTVDRVLLD 256 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~-~~~~~~~fD~VllD 256 (384)
+|.+|||+|||+|+.|..+++. +...|+|+|+++.+++.++++..+.+ .....+..... ..+....||.+.+|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVV----VMEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEE----EECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCcccc----ccccceEEEeCHhHcCcCCCCEEEEE
Confidence 5779999999999999998886 23589999999999988665433221 11111221111 11211247888888
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
...+.. ..+|..+.++| ||||+++..+
T Consensus 111 ~v~~~l-------------------------~~~l~~i~rvL----kpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL-------------------------DLILPPLYEIL----EKNGEVAALI 137 (232)
T ss_dssp CSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEEE
T ss_pred EEhhhH-------------------------HHHHHHHHHhc----cCCCEEEEEE
Confidence 764332 34677788875 9999999863
No 269
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.47 E-value=1.5e-06 Score=84.93 Aligned_cols=114 Identities=13% Similarity=0.037 Sum_probs=86.5
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
++..+..+|||+|||+|..+..+++..++ .+++..|. +..++.+++++...+..++.++.+|+...+ . ..+|+|
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~--~--~~~D~~ 248 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP--L--PEADLY 248 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC--C--CCCSEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC--C--CCceEE
Confidence 34566789999999999999999999875 67888896 788999988887666778999999987543 2 458999
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCc
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~ 317 (384)
++- .+...|+.++. .+||+++.+.| +|||+|+....-+.+
T Consensus 249 ~~~-------------~vlh~~~d~~~-------~~iL~~~~~al----~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 249 ILA-------------RVLHDWADGKC-------SHLLERIYHTC----KPGGGILVIESLLDE 288 (353)
T ss_dssp EEE-------------SSGGGSCHHHH-------HHHHHHHHHHC----CTTCEEEEEECCCCT
T ss_pred Eee-------------eecccCCHHHH-------HHHHHHHHhhC----CCCCEEEEEEeeeCC
Confidence 871 23344555543 46888988886 999999988765543
No 270
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.44 E-value=1.9e-07 Score=92.80 Aligned_cols=131 Identities=6% Similarity=0.038 Sum_probs=86.5
Q ss_pred hcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEE--EEecCCCCcccccCCCCC
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI--VCNYDGNELPKVLGLNTV 250 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~--~~~~D~~~~~~~~~~~~f 250 (384)
.+.+.++.+|||+|||+|..+..+++. ...|+++|+|+..++.++++ |+.... +...++..++ +..++|
T Consensus 102 ~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~--~~~~~f 172 (416)
T 4e2x_A 102 TELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR--RTEGPA 172 (416)
T ss_dssp TTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH--HHHCCE
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc--cCCCCE
Confidence 345678999999999999999888875 35899999999999888765 554322 1122222222 123789
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC---------------
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI--------------- 315 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi--------------- 315 (384)
|+|++.- ++..-| . ...+|..+.++| ||||+++.++-..
T Consensus 173 D~I~~~~------vl~h~~------d----------~~~~l~~~~r~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~ 226 (416)
T 4e2x_A 173 NVIYAAN------TLCHIP------Y----------VQSVLEGVDALL----APDGVFVFEDPYLGDIVAKTSFDQIFDE 226 (416)
T ss_dssp EEEEEES------CGGGCT------T----------HHHHHHHHHHHE----EEEEEEEEEEECHHHHHHHTCGGGCSTT
T ss_pred EEEEECC------hHHhcC------C----------HHHHHHHHHHHc----CCCeEEEEEeCChHHhhhhcchhhhhhh
Confidence 9999842 222111 1 245778888876 9999999876421
Q ss_pred -CccccHHHHHHHHhcCCCEEeec
Q 016730 316 -MVTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 316 -~~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
...-..+.+..++++.+++++.+
T Consensus 227 ~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 227 HFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CCEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhhcCCHHHHHHHHHHcCCEEEEE
Confidence 01123456677777788777654
No 271
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.44 E-value=1.7e-07 Score=88.64 Aligned_cols=84 Identities=17% Similarity=0.065 Sum_probs=69.0
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
..+..+++.+| +|||+|||+|..|..+++.. +.|+|+|+|+..++.+++++. + .++.++++|+..++... ..
T Consensus 38 ~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~--~-~~v~vi~~D~l~~~~~~-~~ 109 (271)
T 3fut_A 38 RIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS--G-LPVRLVFQDALLYPWEE-VP 109 (271)
T ss_dssp HHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT--T-SSEEEEESCGGGSCGGG-SC
T ss_pred HHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC--C-CCEEEEECChhhCChhh-cc
Confidence 35566778889 99999999999999998863 589999999999999998875 2 57999999998765321 13
Q ss_pred CCCEEEEcCCCC
Q 016730 249 TVDRVLLDAPCS 260 (384)
Q Consensus 249 ~fD~VllDaPCS 260 (384)
.||.|+.++|..
T Consensus 110 ~~~~iv~NlPy~ 121 (271)
T 3fut_A 110 QGSLLVANLPYH 121 (271)
T ss_dssp TTEEEEEEECSS
T ss_pred CccEEEecCccc
Confidence 689999999953
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.42 E-value=1.8e-07 Score=87.23 Aligned_cols=84 Identities=18% Similarity=0.206 Sum_probs=66.3
Q ss_pred chhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 169 l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
..+..+++.++++|||+|||+|..|..+++. +.+.|+|+|+|+..++.++++ +..++.++++|+..++......
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~~~~ 95 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCSLGK 95 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGGSCS
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhHccC
Confidence 3456667888999999999999999988875 236899999999999999887 3457899999998875321112
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.| .|+.|+|.
T Consensus 96 ~~-~vv~NlPy 105 (249)
T 3ftd_A 96 EL-KVVGNLPY 105 (249)
T ss_dssp SE-EEEEECCT
T ss_pred Cc-EEEEECch
Confidence 34 89999995
No 273
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.40 E-value=3.7e-07 Score=85.84 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=76.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.+++.+|||+||||||.+..+++..+ .+.|+|+|+.......... ....|. ++.....+.... .+.++.||+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~--~l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIH--RLEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTT--TSCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceeh--hcCCCCccEEEe
Confidence 46788999999999999988776543 3567888877331000000 001122 334444543221 133478999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEEeccCCccccHHHHHHHHhcC-CC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYALKKR-DV 333 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYsTCSi~~~ENe~vv~~~l~~~-~~ 333 (384)
|..-+ +|.- .+... .+..+|+-|.+.| ||| |.+|...-.-+-.+-.+.++.+-+.+ .+
T Consensus 147 D~apn-sG~~-------------~~D~~--rs~~LL~~a~~~L----kpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V 206 (277)
T 3evf_A 147 DIGES-SSSS-------------VTEGE--RTVRVLDTVEKWL----ACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGT 206 (277)
T ss_dssp CCCCC-CSCH-------------HHHHH--HHHHHHHHHHHHH----TTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCE
T ss_pred cCccC-cCch-------------HHHHH--HHHHHHHHHHHHh----CCCCCeEEEEecCCCCccHHHHHHHHHHhcCCE
Confidence 97555 6641 11111 2233478888886 999 99997543221233344444444443 34
Q ss_pred EEee
Q 016730 334 KLVP 337 (384)
Q Consensus 334 ~l~~ 337 (384)
....
T Consensus 207 ~~~K 210 (277)
T 3evf_A 207 VIRN 210 (277)
T ss_dssp EECC
T ss_pred EEEe
Confidence 4443
No 274
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.39 E-value=4.8e-07 Score=84.74 Aligned_cols=108 Identities=20% Similarity=0.117 Sum_probs=77.5
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaP 258 (384)
..+|||+|||.|-.+..++...+ ...++|+|+|+.+++.+++|+.++|+. ..+...|...-+ ..+.||+||+.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~---p~~~~DvaL~l-- 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR---LDEPADVTLLL-- 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC---CCSCCSEEEET--
T ss_pred CceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC---CCCCcchHHHH--
Confidence 56999999999998887766543 479999999999999999999999997 566677766433 23789999872
Q ss_pred CCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEE-EEeccCC
Q 016730 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV-YSTCSIM 316 (384)
Q Consensus 259 CSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lv-YsTCSi~ 316 (384)
+. +..|-..|+..+-..++.| ++||.+| +=|-|+.
T Consensus 206 ----------------kt---i~~Le~q~kg~g~~ll~aL----~~~~vvVSfp~ksl~ 241 (281)
T 3lcv_B 206 ----------------KT---LPCLETQQRGSGWEVIDIV----NSPNIVVTFPTKSLG 241 (281)
T ss_dssp ----------------TC---HHHHHHHSTTHHHHHHHHS----SCSEEEEEEECC---
T ss_pred ----------------HH---HHHhhhhhhHHHHHHHHHh----CCCCEEEeccchhhc
Confidence 11 2333344443444667765 9999887 4454453
No 275
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.39 E-value=2.3e-06 Score=79.28 Aligned_cols=106 Identities=15% Similarity=0.099 Sum_probs=74.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDa 257 (384)
+..+|||+|||.|-.+..+. +...++|+|+|+..++.+++++.++|. +..+...|....+. .+.||+||+-
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~---~~~~DvvLll- 175 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPP---AEAGDLALIF- 175 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCC---CCBCSEEEEE-
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCC---CCCcchHHHH-
Confidence 46699999999998776544 457999999999999999999999995 56777788776442 2689999872
Q ss_pred CCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEE-EEeccCC
Q 016730 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV-YSTCSIM 316 (384)
Q Consensus 258 PCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lv-YsTCSi~ 316 (384)
+. +..|...|+..+...++.| +++|.+| +=|-|+.
T Consensus 176 -----------------k~---lh~LE~q~~~~~~~ll~aL----~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 176 -----------------KL---LPLLEREQAGSAMALLQSL----NTPRMAVSFPTRSLG 211 (253)
T ss_dssp -----------------SC---HHHHHHHSTTHHHHHHHHC----BCSEEEEEEECC---
T ss_pred -----------------HH---HHHhhhhchhhHHHHHHHh----cCCCEEEEcChHHhc
Confidence 11 2234444555555666664 8887776 3344654
No 276
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.35 E-value=5.5e-07 Score=85.31 Aligned_cols=135 Identities=10% Similarity=0.015 Sum_probs=76.6
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEe-cCCCCcccccCCCCCCEEEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCN-YDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~-~D~~~~~~~~~~~~fD~Vll 255 (384)
++|.+|||+||||||++..+++.++ ...|+++|+.......... ...++.+-+.+.. .|... +.+..||+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~----l~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFT----MPTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTT----SCCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCCceEEeecCceeee----cCCCCcCEEee
Confidence 4799999999999999999887653 3578899986431000000 0001212222321 13322 23468999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEEeccCCccccHHHHHHHHhcC-CC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYALKKR-DV 333 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYsTCSi~~~ENe~vv~~~l~~~-~~ 333 (384)
|...+ +|.- .+... .|..+|.-|.+.| +|| |.+|.-.-..+-.+-.+.+..+-+.+ .+
T Consensus 154 D~APn-sG~~-------------~~D~~--rs~~LL~~A~~~L----kpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V 213 (300)
T 3eld_A 154 DIGES-SSNP-------------LVERD--RTMKVLENFERWK----HVNTENFCVKVLAPYHPDVIEKLERLQLRFGGG 213 (300)
T ss_dssp CCCCC-CSSH-------------HHHHH--HHHHHHHHHHHHC----CTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCE
T ss_pred cCcCC-CCCH-------------HHHHH--HHHHHHHHHHHHh----cCCCCcEEEEeccccCccHHHHHHHHHHhCCcE
Confidence 98877 8841 11111 2344477777775 999 99986432222333344444444443 34
Q ss_pred EEee
Q 016730 334 KLVP 337 (384)
Q Consensus 334 ~l~~ 337 (384)
.+..
T Consensus 214 ~~~K 217 (300)
T 3eld_A 214 IVRV 217 (300)
T ss_dssp EECC
T ss_pred EEEe
Confidence 4443
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.35 E-value=1.6e-07 Score=88.39 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=75.8
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
++++.+|||+||||||++..++..++ ...|+++|+.......... .+.+|.+-+.+ ..+.. .. .+...++|+||+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~-~~~~d-v~-~l~~~~~DvVLS 162 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLGWNLIRF-KDKTD-VF-NMEVIPGDTLLC 162 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTGGGEEE-ECSCC-GG-GSCCCCCSEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCCCceEEe-eCCcc-hh-hcCCCCcCEEEe
Confidence 35788999999999999988776653 3578999997542111000 00123222323 32221 11 123478999999
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC--cEEEEEeccCCc---cccHHHHHHHHhc
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG--GYIVYSTCSIMV---TENEAVIDYALKK 330 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG--G~lvYsTCSi~~---~ENe~vv~~~l~~ 330 (384)
|..-+ +|.- .+... .+..+|.-|.+.| +|| |.+|.- ++. .+-.+.++.+-+.
T Consensus 163 DmApn-sG~~-------------~~D~~--rs~~LL~~A~~~L----k~g~~G~Fv~K---vF~pyg~~~~~l~~~lk~~ 219 (282)
T 3gcz_A 163 DIGES-SPSI-------------AVEEQ--RTLRVLNCAKQWL----QEGNYTEFCIK---VLCPYTPLIMEELSRLQLK 219 (282)
T ss_dssp CCCCC-CSCH-------------HHHHH--HHHHHHHHHHHHH----HHHCCCEEEEE---ESCCCSHHHHHHHHHHHHH
T ss_pred cCccC-CCCh-------------HHHHH--HHHHHHHHHHHHc----CCCCCCcEEEE---EecCCCccHHHHHHHHHHh
Confidence 97655 7641 11111 2233477788876 999 999853 444 3333444444334
Q ss_pred C-CCEEee
Q 016730 331 R-DVKLVP 337 (384)
Q Consensus 331 ~-~~~l~~ 337 (384)
+ .+....
T Consensus 220 F~~V~~~K 227 (282)
T 3gcz_A 220 HGGGLVRV 227 (282)
T ss_dssp HCCEEECC
T ss_pred cCCEEEEc
Confidence 3 344443
No 278
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.31 E-value=8.4e-07 Score=92.23 Aligned_cols=75 Identities=13% Similarity=0.004 Sum_probs=64.6
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
.+-+|||+|||.|..+..||++ +..|+|+|.++..++.++..+...|..++.+.++|+.++......+.||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 4569999999999999999886 36899999999999999999998887789999999887744344478999997
No 279
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.30 E-value=4.8e-06 Score=80.94 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.+..+|+.. + . ..||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--p~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-S--I--PNADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-C--C--CCCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeC-HHHHhhccc------CCCcEEEeccccC-C--C--CCccEEEe
Confidence 456789999999999999999988754 68999999 888876654 2458888999865 2 2 24999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC---CcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp---GG~lvYsTCSi~ 316 (384)
--. ...+...+ ..++|+++.+.| || ||+|+.+.....
T Consensus 253 ~~~-------------lh~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 253 KYI-------------LHNWTDKD-------CLRILKKCKEAV----TNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ESC-------------GGGSCHHH-------HHHHHHHHHHHH----SGGGCCCEEEEEECEEC
T ss_pred ehh-------------hccCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeecC
Confidence 321 12233322 236788888886 99 999998876543
No 280
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.25 E-value=4.6e-06 Score=81.85 Aligned_cols=104 Identities=11% Similarity=0.073 Sum_probs=76.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|+.. + ++ .. |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~p-~~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-G--VP-KG-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-C--CC-CC-CEEEE
Confidence 456789999999999999999998764 68999999 777766543 2568999999876 2 22 23 99987
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
--. ...|...+. .++|+++.+.| ||||+|+.....+.
T Consensus 268 ~~v-------------lh~~~~~~~-------~~~l~~~~~~L----~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 268 KWI-------------CHDWSDEHC-------LKLLKNCYAAL----PDHGKVIVAEYILP 304 (368)
T ss_dssp ESC-------------GGGBCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCCC
T ss_pred ech-------------hhcCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccC
Confidence 321 223343332 46788888886 99999998876654
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.24 E-value=4e-07 Score=85.13 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=64.8
Q ss_pred hhhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--cC-
Q 016730 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LG- 246 (384)
Q Consensus 170 ~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--~~- 246 (384)
.+..+++.+|++|||+|||+|..|. ++ .. ..+.|+|+|+|+.+++.+++++... .++.++++|+..++.. ..
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHHH
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhcc
Confidence 3455678889999999999999999 54 32 2223999999999999999887543 5799999999876421 10
Q ss_pred CCCCCEEEEcCCCC
Q 016730 247 LNTVDRVLLDAPCS 260 (384)
Q Consensus 247 ~~~fD~VllDaPCS 260 (384)
....|.|+.++|..
T Consensus 88 ~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 88 MGQPLRVFGNLPYN 101 (252)
T ss_dssp HTSCEEEEEECCTT
T ss_pred cCCceEEEECCCCC
Confidence 02458999999963
No 282
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.23 E-value=1.5e-06 Score=81.95 Aligned_cols=120 Identities=18% Similarity=0.081 Sum_probs=72.8
Q ss_pred CCCCCceEEEecc------CCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCC
Q 016730 175 APQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (384)
Q Consensus 175 ~~~~g~~VLD~ca------gpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~ 248 (384)
.+..|++|||+|| +||+ ..+.+..+..+.|+++|+.+--. ..+ .++.+|...+.. ..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~~---~~ 168 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVHT---AN 168 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEEE---SS
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEcccccccc---CC
Confidence 4557999999997 9999 44555544436999999976210 122 346899765432 37
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHH
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l 328 (384)
+||+||.|.....+|... .+..+ +. .|. ...|.-|.+. |+|||.++.= ++.-|.++.+..+.
T Consensus 169 k~DLVISDMAPNtTG~~D-~d~~R---s~----~L~---ElALdfA~~~----LkpGGsFvVK---VFQGsg~~~L~~lr 230 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVT-KENDS---KE----GFF---TYLCGFIKQK----LALGGSIAVK---ITEHSWNADLYKLM 230 (344)
T ss_dssp CEEEEEECCCCTTSCSSC-SCCCC---CC----THH---HHHHHHHHHH----EEEEEEEEEE---ECSSSCCHHHHHHH
T ss_pred CCCEEEecCCCCcCCccc-cchhH---HH----HHH---HHHHHHHHHh----CcCCCEEEEE---EecCCCHHHHHHHH
Confidence 899999999888888722 11111 11 011 1133334444 5999999854 34333344444444
Q ss_pred h
Q 016730 329 K 329 (384)
Q Consensus 329 ~ 329 (384)
+
T Consensus 231 k 231 (344)
T 3r24_A 231 G 231 (344)
T ss_dssp T
T ss_pred h
Confidence 4
No 283
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.22 E-value=2.5e-06 Score=81.01 Aligned_cols=125 Identities=10% Similarity=0.116 Sum_probs=90.3
Q ss_pred CceEEEeccCCChHHHHHHHHcc----CCceEEEEeCCH--------------------------HHHHHHHHHHHHcCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKA--------------------------SRLKSLTANLHRMGV 228 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~----~~g~V~a~D~~~--------------------------~rl~~l~~n~~r~g~ 228 (384)
..+||++|++.|+-+++++..++ ..++|+++|... .+++.+++|+++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 34899999999999999998774 257899999641 157889999999998
Q ss_pred --ceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc
Q 016730 229 --TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (384)
Q Consensus 229 --~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG 306 (384)
+++.++.+|+.+.......++||.|++|+- + ..-....|+.++..| +|||
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-------------~-----------y~~~~~~Le~~~p~L----~pGG 238 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-------------L-----------YESTWDTLTNLYPKV----SVGG 238 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-------------S-----------HHHHHHHHHHHGGGE----EEEE
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-------------c-----------cccHHHHHHHHHhhc----CCCE
Confidence 679999999876432233468999999973 0 011245677788876 9999
Q ss_pred EEEEEeccCCccccHHHHHHHHhcCC
Q 016730 307 YIVYSTCSIMVTENEAVIDYALKKRD 332 (384)
Q Consensus 307 ~lvYsTCSi~~~ENe~vv~~~l~~~~ 332 (384)
+||.--....+.+.+ -|..|+++++
T Consensus 239 iIv~DD~~~~~G~~~-Av~Ef~~~~~ 263 (282)
T 2wk1_A 239 YVIVDDYMMCPPCKD-AVDEYRAKFD 263 (282)
T ss_dssp EEEESSCTTCHHHHH-HHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHH-HHHHHHHhcC
Confidence 999766544455444 4445566655
No 284
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.21 E-value=6.3e-06 Score=80.75 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=76.6
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|+.. + ++ .. |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~--~p-~~-D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-E--VP-SG-DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-C--CC-CC-CEEEe
Confidence 556789999999999999999998865 68999999 777665543 2578999999876 3 22 23 99987
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
-- +...|..++. .++|+++.+.| ||||+|+.....+.
T Consensus 266 ~~-------------vlh~~~d~~~-------~~~L~~~~~~L----~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 266 KW-------------ILHDWSDQHC-------ATLLKNCYDAL----PAHGKVVLVQCILP 302 (364)
T ss_dssp ES-------------CGGGSCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCBC
T ss_pred hH-------------HhccCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccC
Confidence 32 1233444332 46788888886 99999998876543
No 285
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.19 E-value=9.9e-06 Score=78.87 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=75.0
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEc
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllD 256 (384)
.++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.+..+|+.. + . ..||+|++-
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--~~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-S--I--PSADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTT-SEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-C--C--CCCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEecc-HHHHhhccc------CCCcEEEeCccCC-C--C--CCceEEEEc
Confidence 46789999999999999999998754 68999999 677765543 3568898999876 3 2 259999984
Q ss_pred CCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCC---CcEEEEEeccCC
Q 016730 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (384)
Q Consensus 257 aPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkp---GG~lvYsTCSi~ 316 (384)
-. ...+...+ ..++|+++.+.| || ||+|+.......
T Consensus 259 ~v-------------lh~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 259 WV-------------LHDWNDEQ-------SLKILKNSKEAI----SHKGKDGKVIIIDISID 297 (358)
T ss_dssp SC-------------GGGSCHHH-------HHHHHHHHHHHT----GGGGGGCEEEEEECEEC
T ss_pred cc-------------ccCCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeccC
Confidence 22 12233322 236888888886 99 999988766543
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.14 E-value=1.6e-06 Score=84.96 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=55.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
+++|++|||+||+|||.|..+++. .+.|+|+|+.+ +...+ ....+|.++..|+..+... ...||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l--~~~~~V~~~~~d~~~~~~~--~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSL--MDTGQVTWLREDGFKFRPT--RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-----CCHHH--HTTTCEEEECSCTTTCCCC--SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-----cChhh--ccCCCeEEEeCccccccCC--CCCcCEEEE
Confidence 568999999999999999988775 47999999753 11112 2345789999999876532 368999999
Q ss_pred cCCC
Q 016730 256 DAPC 259 (384)
Q Consensus 256 DaPC 259 (384)
|.-|
T Consensus 277 Dm~~ 280 (375)
T 4auk_A 277 DMVE 280 (375)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 9864
No 287
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.13 E-value=6.5e-06 Score=80.66 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=75.6
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~Vll 255 (384)
..++.+|||+|||+|..+..+++..++ ..++++|+ +..++.+++ ..++.++.+|+.. + . ..||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--~~~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPL-IKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-S--V--PQGDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--C--CCEEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-C--C--CCCCEEEE
Confidence 456789999999999999999998754 68999999 888776553 2468899999876 2 2 23999997
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
-- + ...+...+ ..++|+++.+.| ||||+|+.+....
T Consensus 274 ~~------~-------lh~~~d~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 274 KA------V-------CHNWSDEK-------CIEFLSNCHKAL----SPNGKVIIVEFIL 309 (372)
T ss_dssp ES------S-------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred ec------c-------cccCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEecc
Confidence 32 1 12233222 236788888886 9999999876543
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.08 E-value=3.1e-06 Score=77.57 Aligned_cols=77 Identities=22% Similarity=0.227 Sum_probs=54.3
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~~~~~~~fD~Vl 254 (384)
+++|.+|||+||||||.+.+.+...+ ...|+|+|+-..-.+. -...+.+|...+.+..+ |....+. ..+|.||
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~----~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP----EKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC----CCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC----ccccEEE
Confidence 46899999999999999987777654 3589999996432110 00113456677888887 8654443 5799999
Q ss_pred EcCC
Q 016730 255 LDAP 258 (384)
Q Consensus 255 lDaP 258 (384)
||--
T Consensus 150 cDIg 153 (267)
T 3p8z_A 150 CDIG 153 (267)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9953
No 289
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.97 E-value=1.8e-06 Score=81.55 Aligned_cols=117 Identities=14% Similarity=0.087 Sum_probs=75.8
Q ss_pred cccEEEecCCCCCCCCcccccceEEEeCCcCcchh---hh---cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEe
Q 016730 137 KVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPV---MA---LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANE 210 (384)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~---~~---L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D 210 (384)
..|++-+++. .-..+.+|.+|-..+-+....++. .+ +..-.+..+||+.+|+|..+..+.+ ...+++.+|
T Consensus 45 G~G~Y~L~~~-~a~ktgE~~~GI~rl~~~~~~~p~~l~~yf~~l~~~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE 120 (283)
T 2oo3_A 45 GRGIYDLKDK-QSLKTEEYKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLR---SQDRLYLCE 120 (283)
T ss_dssp TTSEEETTCC-----CCGGGGTHHHHHHTGGGSCGGGHHHHHHHHHHSSSSSCCEEECHHHHHHHHSC---TTSEEEEEC
T ss_pred CcCccCCCCh-HHhhcHHHHHHHHHHHhcccCCcHHHHHHHHHHHHhcCCCceeEeCCcHHHHHHHcC---CCCeEEEEe
Confidence 3455544332 345688999886555321111111 11 1112456799999999998875544 346899999
Q ss_pred CCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--CCCCCCEEEEcCCC
Q 016730 211 MKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDRVLLDAPC 259 (384)
Q Consensus 211 ~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--~~~~fD~VllDaPC 259 (384)
.++..++.+++|++. ..++.+.+.|+....... +..+||.|++|||.
T Consensus 121 ~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 121 LHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp CSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 999999999999975 356889999976532211 12479999999995
No 290
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.92 E-value=6.9e-06 Score=71.27 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=74.6
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~ 252 (384)
++.++|++|||++||. +++|+++.+++.++++... ++.+..+|+..++.. +..++||.
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 4678999999999985 2389999999999887532 367778888876531 13478999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc------ccHHHHHH
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------ENEAVIDY 326 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~------ENe~vv~~ 326 (384)
|++.-. ...+. ++ ..++|.++.+.| ||||+++.+.-..... -..+.+..
T Consensus 67 V~~~~~---l~~~~--~~----------------~~~~l~~~~r~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 121 (176)
T 2ld4_A 67 ILSGLV---PGSTT--LH----------------SAEILAEIARIL----RPGGCLFLKEPVETAVDNNSKVKTASKLCS 121 (176)
T ss_dssp EEECCS---TTCCC--CC----------------CHHHHHHHHHHE----EEEEEEEEEEEEESSSCSSSSSCCHHHHHH
T ss_pred EEECCh---hhhcc--cC----------------HHHHHHHHHHHC----CCCEEEEEEcccccccccccccCCHHHHHH
Confidence 997321 11110 11 134778888886 9999999854321110 12445556
Q ss_pred HHhcCCC
Q 016730 327 ALKKRDV 333 (384)
Q Consensus 327 ~l~~~~~ 333 (384)
.++..++
T Consensus 122 ~l~~aGf 128 (176)
T 2ld4_A 122 ALTLSGL 128 (176)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 6777777
No 291
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.80 E-value=0.00027 Score=69.69 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=59.8
Q ss_pred ceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-c-----CCCCCCEE
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-----GLNTVDRV 253 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~-----~~~~fD~V 253 (384)
.+|+|+|||.||.+.-+.+. +-..|.|+|+++..++..+.|.. +..+++.|..++... . ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~-----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP-----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT-----TSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC-----CCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999877665 23467899999999999988852 455667888876321 1 23679999
Q ss_pred EEcCCCCCCCcCCC
Q 016730 254 LLDAPCSGTGVISK 267 (384)
Q Consensus 254 llDaPCSg~G~~~r 267 (384)
+.+|||.+.-...+
T Consensus 76 ~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 76 IGGPPCQGFSSIGK 89 (376)
T ss_dssp EECCCCCTTC----
T ss_pred EecCCCCCcccccC
Confidence 99999988766554
No 292
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.79 E-value=0.00029 Score=67.07 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=81.8
Q ss_pred hhhcCCCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHc--C---CceEEEEecCCCCccccc
Q 016730 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVL 245 (384)
Q Consensus 171 ~~~L~~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~--g---~~~v~~~~~D~~~~~~~~ 245 (384)
++++.+. ..+||=+|.|-|+.+..++..- +..+|+.+|+|+..++.+++-+..+ | -.++.++.+|+..+-...
T Consensus 77 ~l~~~p~-pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~ 154 (294)
T 3o4f_A 77 PLLAHGH-AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT 154 (294)
T ss_dssp HHHHSSC-CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS
T ss_pred HHhhCCC-CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc
Confidence 3334444 4689999999999887766643 2358999999999999999887543 2 245899999999875433
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.++||+|++|.+-. .|. ... ..+ ++.++.+.+.| +|||.+|.-+
T Consensus 155 -~~~yDvIi~D~~dp-~~~-----~~~-L~t-----------~eFy~~~~~~L----~p~Gv~v~q~ 198 (294)
T 3o4f_A 155 -SQTFDVIISDCTDP-IGP-----GES-LFT-----------SAFYEGCKRCL----NPGGIFVAQN 198 (294)
T ss_dssp -SCCEEEEEESCCCC-CCT-----TCC-SSC-----------CHHHHHHHHTE----EEEEEEEEEE
T ss_pred -cccCCEEEEeCCCc-CCC-----chh-hcC-----------HHHHHHHHHHh----CCCCEEEEec
Confidence 47899999998731 121 111 111 34566666665 9999999643
No 293
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.79 E-value=5e-05 Score=73.89 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=55.2
Q ss_pred ceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc-ccCCCCCCEEEEcCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLDAP 258 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~-~~~~~~fD~VllDaP 258 (384)
.+|+|++||.||.+..+.+.--....|+++|+++..++..+.|.. +..++++|...+.. .+....+|+|+.+||
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 579999999999998877652111379999999999999999864 23356788877642 111126999999999
Q ss_pred CCCCCcCCC
Q 016730 259 CSGTGVISK 267 (384)
Q Consensus 259 CSg~G~~~r 267 (384)
|.+..+..+
T Consensus 78 Cq~fS~ag~ 86 (343)
T 1g55_A 78 CQPFTRIGR 86 (343)
T ss_dssp ---------
T ss_pred CcchhhcCC
Confidence 988876644
No 294
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.60 E-value=0.00016 Score=69.94 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=60.9
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaP 258 (384)
+.+|+|+|||.||.+..+.+. +-..|+++|+++..++..+.|..... ++|...+.... ...+|+|+.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~-~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKT-IPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGG-SCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhh-CCCCCEEEECCC
Confidence 568999999999988876654 33478999999999999999974321 57777664321 146999999999
Q ss_pred CCCCCcCCCC
Q 016730 259 CSGTGVISKD 268 (384)
Q Consensus 259 CSg~G~~~r~ 268 (384)
|.+.-+..+.
T Consensus 81 CQ~fS~ag~~ 90 (327)
T 2c7p_A 81 CQAFSISGKQ 90 (327)
T ss_dssp CTTTCTTSCC
T ss_pred CCCcchhccc
Confidence 9887666553
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.59 E-value=0.00037 Score=65.84 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=53.7
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCcccccCCCCCCEEE
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~~~~~~~fD~Vl 254 (384)
++++.+|||+||||||.+.+.+...+ ...|+|+|+-..-.+. -...+.+|-..|.+... |+..++. ..+|.|+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~----~~~D~iv 165 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS----ECCDTLL 165 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC----CCCSEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC----CCCCEEE
Confidence 46788999999999999987766543 3589999986541100 00001233344777665 7766654 5699999
Q ss_pred EcCCCCCCC
Q 016730 255 LDAPCSGTG 263 (384)
Q Consensus 255 lDaPCSg~G 263 (384)
||.- -.+|
T Consensus 166 cDig-eSs~ 173 (321)
T 3lkz_A 166 CDIG-ESSS 173 (321)
T ss_dssp ECCC-CCCS
T ss_pred EECc-cCCC
Confidence 9987 4443
No 296
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.57 E-value=0.00013 Score=76.29 Aligned_cols=120 Identities=13% Similarity=0.077 Sum_probs=79.5
Q ss_pred CceEEEeccCCChH---HHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccccCCCCCCEEE
Q 016730 179 KERVIDMAAAPGGK---TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (384)
Q Consensus 179 g~~VLD~cagpGgk---t~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl 254 (384)
+..|||+|||+|-. ++..++......+|+|+|.++. ...+++..+.+|..+ |+++++|.+++.. .+++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~L---PEKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVA---PEKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCC---SSCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccC---CcccCEEE
Confidence 35799999999987 4444444332337999999985 556777888888865 8999999998743 27899999
Q ss_pred EcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCC--ccccHHHHHH
Q 016730 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENEAVIDY 326 (384)
Q Consensus 255 lDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~--~~ENe~vv~~ 326 (384)
... .|..-- . +. -.+.|.++-++ |||||.++=+.|+++ +-+.+..-+.
T Consensus 434 SEw----MG~fLl--------~-E~-------mlevL~Ardr~----LKPgGimiPs~atlyiapi~~~~l~~e 483 (637)
T 4gqb_A 434 SEL----LGSFAD--------N-EL-------SPECLDGAQHF----LKDDGVSIPGEYTSFLAPISSSKLYNE 483 (637)
T ss_dssp CCC----CBTTBG--------G-GC-------HHHHHHHHGGG----EEEEEEEESCEEEEEEEEEECHHHHHH
T ss_pred EEc----Cccccc--------c-cC-------CHHHHHHHHHh----cCCCcEEccccceEEEEEecCHHHHHH
Confidence 753 222111 0 11 12356666666 499999985555554 5566654443
No 297
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.51 E-value=7.7e-05 Score=78.46 Aligned_cols=124 Identities=11% Similarity=0.073 Sum_probs=80.9
Q ss_pred CceEEEeccCCChHHHHHHHH---cc---------CCceEEEEeCCHHHHHHHHHHHHHcCCce-EEEEecCCCCcccc-
Q 016730 179 KERVIDMAAAPGGKTTYIAAL---MK---------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKV- 244 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~---~~---------~~g~V~a~D~~~~rl~~l~~n~~r~g~~~-v~~~~~D~~~~~~~- 244 (384)
+..|||+|||+|-.+...+.. .+ ...+|+|+|.++.....++.... .|..+ |+++.+|.+++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 357999999999987543322 22 23499999999987776665554 77765 89999999987431
Q ss_pred --cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc--CCcccc
Q 016730 245 --LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS--IMVTEN 320 (384)
Q Consensus 245 --~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS--i~~~EN 320 (384)
...+++|+|+..-- |.+.- .++..+.|..+-++ |||||.++=+.|+ +.|-+.
T Consensus 489 ~~~~~ekVDIIVSElm----Gsfl~----------------nEL~pe~Ld~v~r~----Lkp~Gi~iP~~~t~ylaPi~~ 544 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL----GSFGD----------------NELSPECLDGVTGF----LKPTTISIPQKYTSYVKPIMS 544 (745)
T ss_dssp HHTTCCCCSEEEECCC----BTTBG----------------GGSHHHHHHTTGGG----SCTTCEEESCEEEEEEEEEEC
T ss_pred ccCCCCcccEEEEecc----ccccc----------------hhccHHHHHHHHHh----CCCCcEEECCccEEEEEEecC
Confidence 01278999998654 32211 01234466666555 5999999844444 446666
Q ss_pred HHHHHHH
Q 016730 321 EAVIDYA 327 (384)
Q Consensus 321 e~vv~~~ 327 (384)
+..-+.+
T Consensus 545 ~~l~~~v 551 (745)
T 3ua3_A 545 THIHQTI 551 (745)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6654433
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.49 E-value=0.00017 Score=70.84 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=79.2
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcC---C-----ceEEEEecCCCCcccc--cCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG---V-----TNTIVCNYDGNELPKV--LGL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g---~-----~~v~~~~~D~~~~~~~--~~~ 247 (384)
+..+||=+|.|-|+....++.. + ..+|+.+|+|+.-++.+++.+..+. . .++.++..|+..+-.. ...
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4579999999999988777664 3 3689999999999999988653221 1 2378888999876431 123
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE-EeccCC
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STCSIM 316 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY-sTCSi~ 316 (384)
++||+|++|++-...+.....|. ..-..++++..+.+.| +|||.+|. +.|-..
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a------------~~Lft~eFy~~~~~~L----~p~GVlv~Q~~s~~~ 336 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDS------------TWEFLRLILDLSMKVL----KQDGKYFTQGNCVNL 336 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----C------------HHHHHHHHHHHHHHTE----EEEEEEEEEEEETTC
T ss_pred CceeEEEECCCCCcccCcccCcc------------hHHHHHHHHHHHHHhc----CCCCEEEEecCCCcc
Confidence 68999999975211111000000 1123566777777775 99999986 444433
No 299
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.04 E-value=0.00096 Score=56.85 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=48.6
Q ss_pred CCCceEEEeccCCC-hHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE-E
Q 016730 177 QEKERVIDMAAAPG-GKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV-L 254 (384)
Q Consensus 177 ~~g~~VLD~cagpG-gkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V-l 254 (384)
.++.+|||+|||+| ..+.+|++.. ...|+|+|+++..+. ++..|..+..... .+.||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------~v~dDiF~P~~~~-Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------IVRDDITSPRMEI-YRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT---------------EECCCSSSCCHHH-HTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc---------------eEEccCCCCcccc-cCCcCEEEE
Confidence 45679999999999 4777777643 247999999997765 6778887753211 1489999 8
Q ss_pred EcCC
Q 016730 255 LDAP 258 (384)
Q Consensus 255 lDaP 258 (384)
+.||
T Consensus 96 irPP 99 (153)
T 2k4m_A 96 IRPP 99 (153)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8888
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.04 E-value=0.0012 Score=62.53 Aligned_cols=60 Identities=12% Similarity=-0.042 Sum_probs=44.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~ 239 (384)
.+|+.|||.+||+|..+..++.+ ...++++|+++..++.+++++++..-.....+.+|+.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~~~ 293 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGFSLEVLDGAT 293 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhccccchhhCCccc
Confidence 58999999999999877655443 2589999999999999999998764322223344543
No 301
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.89 E-value=0.001 Score=64.26 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=56.9
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceE-EEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEEEEc
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLI-YANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVLLD 256 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V-~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~VllD 256 (384)
.-+|+|++||.||.+..+.+.--+.-.| .|+|+++..++..+.|... . +.+.|.+++... .....+|+|+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEec
Confidence 4589999999999887765531011246 7999999999999998632 1 456888876421 111369999999
Q ss_pred CCCCCC
Q 016730 257 APCSGT 262 (384)
Q Consensus 257 aPCSg~ 262 (384)
|||.+.
T Consensus 84 pPCQ~f 89 (327)
T 3qv2_A 84 PPCQPY 89 (327)
T ss_dssp CCCTTC
T ss_pred CCccCc
Confidence 999988
No 302
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.87 E-value=0.0029 Score=62.86 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=53.0
Q ss_pred hcCCCCCceEEEeccCCChHHHHHH-HHccCCceEEEEeCCHHHHHHHHHHHHH---cCC-ceEEEEec
Q 016730 173 ALAPQEKERVIDMAAAPGGKTTYIA-ALMKNTGLIYANEMKASRLKSLTANLHR---MGV-TNTIVCNY 236 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagpGgkt~~la-~~~~~~g~V~a~D~~~~rl~~l~~n~~r---~g~-~~v~~~~~ 236 (384)
++.+++|+.|+|+||..|..|..++ ...++.++|+|+|.++...+.+++|++. .+. .++.+++.
T Consensus 221 i~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 221 LLRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp SCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred ccccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 3456789999999999999999888 4554458999999999999999999998 346 77777653
No 303
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.87 E-value=0.0032 Score=60.09 Aligned_cols=131 Identities=16% Similarity=0.077 Sum_probs=80.6
Q ss_pred CCceEEEeccCCChHHHHHHH---HccCCc--eEEEEeCCHH--------HHHHHHH-HHHHcC---Cc--eEEEEecCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAA---LMKNTG--LIYANEMKAS--------RLKSLTA-NLHRMG---VT--NTIVCNYDG 238 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~---~~~~~g--~V~a~D~~~~--------rl~~l~~-n~~r~g---~~--~v~~~~~D~ 238 (384)
+.-+|||+|-|+|--++...+ ...... ..+++|..+- -+..+.+ .++... -. ...+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 335799999999986543322 223333 4577775321 1122222 222221 11 245667888
Q ss_pred CCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCcc
Q 016730 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (384)
Q Consensus 239 ~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ 318 (384)
...-..+....||.|++|+= ..+++|++. + .+++....+++ +|||+++--||+
T Consensus 176 ~~~l~~l~~~~~Da~flDgF-----sP~kNPeLW---s-----------~e~f~~l~~~~----~pgg~laTYtaa---- 228 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAF-----SPYKNPELW---T-----------LDFLSLIKERI----DEKGYWVSYSSS---- 228 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCS-----CTTTSGGGG---S-----------HHHHHHHHTTE----EEEEEEEESCCC----
T ss_pred HHHHhhhcccceeEEEeCCC-----CcccCcccC---C-----------HHHHHHHHHHh----CCCcEEEEEeCc----
Confidence 76533343457999999961 125788863 3 34777777775 999999854444
Q ss_pred ccHHHHHHHHhcCCCEEeec
Q 016730 319 ENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 319 ENe~vv~~~l~~~~~~l~~~ 338 (384)
..|...|+..||++...
T Consensus 229 ---g~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 229 ---LSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp ---HHHHHHHHHTTCEEEEE
T ss_pred ---HHHHHHHHHCCCEEEec
Confidence 68899999999988764
No 304
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.82 E-value=0.0011 Score=64.27 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=58.4
Q ss_pred ceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-cCCCCCCEEEEcCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVLLDAP 258 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~~~~~fD~VllDaP 258 (384)
-+|+|+|||.||.+..+.+.--+.-.|.|+|+++..++..+.|.. ...+.+.|..++... .....+|+++..||
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 379999999999888766541111358899999999999988863 223456787766321 11136999999999
Q ss_pred CCCCCcCC
Q 016730 259 CSGTGVIS 266 (384)
Q Consensus 259 CSg~G~~~ 266 (384)
|.+.-...
T Consensus 79 CQ~fS~ag 86 (333)
T 4h0n_A 79 CQPFTRNG 86 (333)
T ss_dssp CCCSEETT
T ss_pred Ccchhhhh
Confidence 98775544
No 305
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.82 E-value=0.0011 Score=63.08 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCCceEEEeccCCChHHHHHHHHccCCce-EEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-c-CCCCCCEE
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKNTGL-IYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-GLNTVDRV 253 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~~g~-V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~-~-~~~~fD~V 253 (384)
+.+-+|+|++||.||.+..+.+. +-... |+++|+++..++..+.|.. +..+...|..++... . ....+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCEE
Confidence 35678999999999988776654 11112 6999999999998887742 334567888876421 1 11479999
Q ss_pred EEcCCCCCCCcCC
Q 016730 254 LLDAPCSGTGVIS 266 (384)
Q Consensus 254 llDaPCSg~G~~~ 266 (384)
+..|||.+.-+..
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999997765543
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.65 E-value=0.0032 Score=61.36 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=60.7
Q ss_pred ccceEEEeCCcC-cchhhhcCCCC------CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 016730 156 MAGFYMLQSASS-FLPVMALAPQE------KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (384)
Q Consensus 156 ~~G~~~~Qd~ss-~l~~~~L~~~~------g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~ 228 (384)
.-|.-.+-|+.- .-.+..+++.+ ++.|||+|.|+|..|..|++.... .+|+|+|+|+.-+..+++.+ ..
T Consensus 29 ~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~---~~ 104 (353)
T 1i4w_A 29 FYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF---EG 104 (353)
T ss_dssp GGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT---TT
T ss_pred CCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc---cC
Confidence 344444445432 22445555553 689999999999999999986432 57999999999888888776 23
Q ss_pred ceEEEEecCCCCcc
Q 016730 229 TNTIVCNYDGNELP 242 (384)
Q Consensus 229 ~~v~~~~~D~~~~~ 242 (384)
.++.++++|+..+.
T Consensus 105 ~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 105 SPLQILKRDPYDWS 118 (353)
T ss_dssp SSCEEECSCTTCHH
T ss_pred CCEEEEECCccchh
Confidence 68999999997653
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.56 E-value=0.0075 Score=57.54 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=59.3
Q ss_pred ceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaPC 259 (384)
.+|||++||.||.+.-+-+. +--.|.|+|+++..++..+.|. + ..++.+|.+++.... ...+|+|+.-|||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~---~---~~~~~~DI~~i~~~~-~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH---S---AKLIKGDISKISSDE-FPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC---C---SEEEESCGGGCCGGG-SCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC---C---CCcccCChhhCCHhh-CCcccEEEecCCC
Confidence 37999999999988766543 2236889999999999998874 2 245678988774321 2579999999999
Q ss_pred CCCCcCCC
Q 016730 260 SGTGVISK 267 (384)
Q Consensus 260 Sg~G~~~r 267 (384)
.+.-+..+
T Consensus 72 Q~fS~ag~ 79 (331)
T 3ubt_Y 72 QSWSEGGS 79 (331)
T ss_dssp GGTEETTE
T ss_pred CCcCCCCC
Confidence 77765543
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.35 E-value=0.0044 Score=57.50 Aligned_cols=50 Identities=12% Similarity=0.173 Sum_probs=38.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~ 228 (384)
..+|+.|||.+||+|..+.... .++ ..++++|+++..++.++++++..++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~-~~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAK-KLG--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHH-HTT--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHH-HcC--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 3689999999999998655433 332 5899999999999999999987664
No 309
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.17 E-value=0.024 Score=55.58 Aligned_cols=129 Identities=10% Similarity=0.066 Sum_probs=72.5
Q ss_pred CceEEEeccCCChHHHHHHHHc--------------cCCceEEEEeCCHHHHHHHHHHHHHcC-----------C-ceEE
Q 016730 179 KERVIDMAAAPGGKTTYIAALM--------------KNTGLIYANEMKASRLKSLTANLHRMG-----------V-TNTI 232 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~--------------~~~g~V~a~D~~~~rl~~l~~n~~r~g-----------~-~~v~ 232 (384)
..+|+|+|||+|..|+.+...+ .+.-.|+.+|+-..-...+=..+.... . .+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5889999999999999874322 134578999987776666655544321 0 0111
Q ss_pred EEecCCCCc-ccccCCCCCCEEEEcCCCCCCCcCCCCchhh--------------cc-CCHHHHHHH-----HHHHHHHH
Q 016730 233 VCNYDGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVK--------------TS-KSLEDIQKC-----SYLQKQLI 291 (384)
Q Consensus 233 ~~~~D~~~~-~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~--------------~~-~~~~~i~~l-----~~~Q~~iL 291 (384)
++.+.+..+ ...++.++||.|+.. .+.--+.+.|+.. .. -++. +.+. .+--..+|
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss---~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSA---FSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEE---SCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEec---ceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHH
Confidence 222222221 233455889999873 3344444444211 11 1233 3222 22223346
Q ss_pred HHHHHchhccCCCCcEEEEEeccC
Q 016730 292 LAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 292 ~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+.-.+. |+|||++|.++..-
T Consensus 209 ~~ra~e----L~pGG~mvl~~~gr 228 (374)
T 3b5i_A 209 RARAAE----VKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHH----EEEEEEEEEEEEEC
T ss_pred HHHHHH----hCCCCEEEEEEecC
Confidence 665665 49999999988754
No 310
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.03 E-value=0.0066 Score=61.57 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=56.6
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc-------------
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------------- 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~------------- 244 (384)
..-+|+|+|||.||.+.-+.+. +--.|.|+|+++..++..+.|... .....+++.|...+...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhh
Confidence 3468999999999988766543 223589999999999998887521 11233456777655310
Q ss_pred --cCCCCCCEEEEcCCCCCCCcCC
Q 016730 245 --LGLNTVDRVLLDAPCSGTGVIS 266 (384)
Q Consensus 245 --~~~~~fD~VllDaPCSg~G~~~ 266 (384)
.....+|+|+.-|||-+.-+..
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC----
T ss_pred hhhcCCCCCEEEecCCCcchhhhC
Confidence 0114699999999998776554
No 311
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.97 E-value=0.0032 Score=66.50 Aligned_cols=130 Identities=17% Similarity=0.094 Sum_probs=80.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-----------CCceEEEEeCCHHHHHHHHH--------------HHHHc-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-----------NTGLIYANEMKASRLKSLTA--------------NLHRM-----G 227 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-----------~~g~V~a~D~~~~rl~~l~~--------------n~~r~-----g 227 (384)
+.-+|+|+|-|+|.-.+.+.+... ..-+++++|..+-..+.+++ .++.+ |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 456899999999998887776531 11468999994433333332 12221 2
Q ss_pred C-----c----eEEEEecCCCCcccccC---CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH
Q 016730 228 V-----T----NTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI 295 (384)
Q Consensus 228 ~-----~----~v~~~~~D~~~~~~~~~---~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~ 295 (384)
+ . .+.+..+|+......+. ...||.|++|+.. ..++|++ |+. +++....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~-----p~~np~~---w~~-----------~~~~~l~ 198 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA-----PAKNPDM---WNE-----------QLFNAMA 198 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC-----C--CCTT---CSH-----------HHHHHHH
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC-----CCCChhh---hhH-----------HHHHHHH
Confidence 1 1 34566678765433221 2679999999852 2467764 233 3555556
Q ss_pred HchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEEee
Q 016730 296 DMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 296 ~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
+++ +|||++...||. ..|...|.+.++.+..
T Consensus 199 ~~~----~~g~~~~t~~~~-------~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 199 RMT----RPGGTFSTFTAA-------GFVRRGLQQAGFNVTK 229 (689)
T ss_dssp HHE----EEEEEEEESCCC-------HHHHHHHHHTTCEEEE
T ss_pred HHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 664 999998766665 4677777777876654
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.96 E-value=0.013 Score=56.49 Aligned_cols=99 Identities=23% Similarity=0.321 Sum_probs=61.4
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC---CCCc----cccc
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKVL 245 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D---~~~~----~~~~ 245 (384)
..+++|++||-.|||+ |..+..++..++ ...|+++|.+++|++.++ .+|.+.+ +..+ ..++ ....
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADLV--LQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSEE--EECSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCEE--EcCcccccchHHHHHHHHh
Confidence 3678999999998754 444445555543 238999999999987764 5787643 2222 0111 1111
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
. ..||+|+- |+|.. ..+..+++.| ++||+++...
T Consensus 240 ~-~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 273 (356)
T 1pl8_A 240 G-CKPEVTIE---CTGAE-------------------------ASIQAGIYAT----RSGGTLVLVG 273 (356)
T ss_dssp T-SCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECS
T ss_pred C-CCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEe
Confidence 2 46999975 33321 1346677775 9999998643
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.78 E-value=0.023 Score=55.27 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=62.1
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc------cC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG 246 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~------~~ 246 (384)
..+++|++||=.|||+ |..+..+|..++ ...|+++|.++++++.++ .+|.+.+ +.....++... ..
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAE----EVGATAT--VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSEE--ECTTSSCHHHHHHSTTSSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCEE--ECCCCcCHHHHHHhhhhcc
Confidence 4678999999988754 334445555543 238999999999987665 4787643 22222222110 11
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+.||+|+- |+|.+ ..+..++++| ++||+++..
T Consensus 251 ~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l----~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIE---CAGVA-------------------------ETVKQSTRLA----KAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CCCCCEEEE---CCCCH-------------------------HHHHHHHHHh----ccCCEEEEE
Confidence 247999875 44432 2456777876 999998864
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.57 E-value=0.036 Score=52.92 Aligned_cols=97 Identities=21% Similarity=0.236 Sum_probs=63.7
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--CCCCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVD 251 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--~~~~fD 251 (384)
.+++|++||-.|||+ |..+..++..++ .+|+++|.++++++.+ +++|.+.+ +..+..++.... ..+.+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLA----RRLGAEVA--VNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHH----HHcCCCEE--EeCCCcCHHHHHHHhCCCCC
Confidence 578999999998865 556666666653 4899999999998866 45787643 233222221111 013689
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.|+... |.+ ..+..+++.| ++||+++..
T Consensus 235 ~vid~~---g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVTA---VSP-------------------------KAFSQAIGMV----RRGGTIALN 262 (340)
T ss_dssp EEEESS---CCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEEeC---CCH-------------------------HHHHHHHHHh----ccCCEEEEe
Confidence 987633 221 2456777876 999999864
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.55 E-value=0.021 Score=54.78 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=60.6
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+++|++||-.|||+ |..+..++..++ .+|+++|.++++++.++ ++|.+.+. .|... .. ..||+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v~---~~~~~----~~-~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHFY---TDPKQ----CK-EELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEEE---SSGGG----CC-SCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCeec---CCHHH----Hh-cCCCEE
Confidence 578999999988754 444455555543 48999999999988664 58887544 33221 21 379998
Q ss_pred EEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 254 llDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+- |+|.. ..+..+++.| ++||+++..
T Consensus 239 id---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 264 (348)
T 3two_A 239 IS---TIPTH-------------------------YDLKDYLKLL----TYNGDLALV 264 (348)
T ss_dssp EE---CCCSC-------------------------CCHHHHHTTE----EEEEEEEEC
T ss_pred EE---CCCcH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 74 33332 1245677775 999998864
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.55 E-value=0.0082 Score=58.98 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=47.8
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc-c----cccCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-P----KVLGLN 248 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~-~----~~~~~~ 248 (384)
++++|++||-.|||+ |..+..+|..++ ..+|+++|.+++|++.++ ++|.. ++..+..++ . ....+.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~---~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGFE---TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTCE---EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCc---EEcCCCcchHHHHHHHHhCCC
Confidence 578999999999765 555666666653 248999999999987764 57873 233322222 1 111223
Q ss_pred CCCEEEE
Q 016730 249 TVDRVLL 255 (384)
Q Consensus 249 ~fD~Vll 255 (384)
.||+|+-
T Consensus 254 g~Dvvid 260 (398)
T 2dph_A 254 EVDCGVD 260 (398)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6999875
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.54 E-value=0.011 Score=58.04 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=36.6
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT 229 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~ 229 (384)
.+++|++||-.|||+ |..+..+|..++ ...|+++|.+++|++.++ ++|.+
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc
Confidence 578999999988654 444555565553 237999999999988774 47874
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.53 E-value=0.03 Score=53.80 Aligned_cols=99 Identities=21% Similarity=0.257 Sum_probs=61.0
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
..+++|++||=.|||+ |..+..++..++ ...|+++|.+++|++.++ ++|.+.+ +..+..++. ....+.
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIAL----EYGATDI--INYKNGDIVEQILKATDGK 234 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHH----HHTCCEE--ECGGGSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHH----HhCCceE--EcCCCcCHHHHHHHHcCCC
Confidence 3578999999998644 333444444432 237999999999987764 4787643 232222221 112234
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.||+|+- |+|.. ..+..+++.| ++||+++..
T Consensus 235 g~D~v~d---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVI---AGGDV-------------------------HTFAQAVKMI----KPGSDIGNV 265 (352)
T ss_dssp CEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEe
Confidence 7999974 33331 1456777876 999998854
No 319
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.50 E-value=0.087 Score=51.78 Aligned_cols=131 Identities=16% Similarity=0.083 Sum_probs=70.3
Q ss_pred CceEEEeccCCChHHHHHHHHc----------------cCCceEEEEeCCHHHHHHH-------HHHH-HHcCC-ceEEE
Q 016730 179 KERVIDMAAAPGGKTTYIAALM----------------KNTGLIYANEMKASRLKSL-------TANL-HRMGV-TNTIV 233 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~----------------~~~g~V~a~D~~~~rl~~l-------~~n~-~r~g~-~~v~~ 233 (384)
..+|+|+|||+|..|+.+.+.+ .+.-.|+.+|+-..-...+ .+.+ +..|- .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4789999999999999877651 1235789999862222111 1111 22332 12244
Q ss_pred EecCCCCc-ccccCCCCCCEEEEcCCCCCCCcCCCCchh--------------hccC-CHHHHH-----HHHHHHHHHHH
Q 016730 234 CNYDGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESV--------------KTSK-SLEDIQ-----KCSYLQKQLIL 292 (384)
Q Consensus 234 ~~~D~~~~-~~~~~~~~fD~VllDaPCSg~G~~~r~p~~--------------~~~~-~~~~i~-----~l~~~Q~~iL~ 292 (384)
+.+....+ ...++.++||.|.... +.--+.+.|+. .... ++..+. +..+--..+|+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~---aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY---CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES---CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc---eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555443 4445568999998743 22223333311 1111 112221 12222233455
Q ss_pred HHHHchhccCCCCcEEEEEeccCC
Q 016730 293 AAIDMVDANSKSGGYIVYSTCSIM 316 (384)
Q Consensus 293 ~a~~~L~~~lkpGG~lvYsTCSi~ 316 (384)
.-.+-| +|||++|.++..-.
T Consensus 210 ~Ra~eL----~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 210 IHSEEL----ISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHE----EEEEEEEEEEECCC
T ss_pred HHHHHh----ccCCeEEEEEecCC
Confidence 555654 99999999887553
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.037 Score=53.56 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=62.5
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
.++++|++||-.|||+ |..+..++..++ ...|+++|.+++|++.++ ++|.+.+ +..+..++. .... +
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~~~~~-g 257 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATHV--INSKTQDPVAAIKEITD-G 257 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTT-S
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCEE--ecCCccCHHHHHHHhcC-C
Confidence 3578999999998765 445556666553 237999999999988764 4687543 233222221 1112 3
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.||.|+- |+|. ...+..+++.| ++||+++..
T Consensus 258 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~ 288 (371)
T 1f8f_A 258 GVNFALE---STGS-------------------------PEILKQGVDAL----GILGKIAVV 288 (371)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHTE----EEEEEEEEC
T ss_pred CCcEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEe
Confidence 7999875 3222 12456778886 999998864
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.32 E-value=0.038 Score=53.57 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=61.0
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCccc---ccCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPK---VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~~---~~~~ 247 (384)
..+++|++||=.|||+ |..+..+|..++ ...|+++|.+++|++.++ ++|.+.+ +..+. .++.. ....
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATEC--LNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcEE--EecccccchHHHHHHHHhC
Confidence 3578999999998654 333445555543 237999999999988764 5788643 22221 11211 0112
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYs 311 (384)
+.||+|+- |+|.. ..+..+++.+ ++| |+++..
T Consensus 260 gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVE---CAGRI-------------------------ETMMNALQST----YCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCCEEEEE
Confidence 37999975 33321 2456778886 999 998854
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.27 E-value=0.03 Score=54.41 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=62.3
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC--CCCccc---ccCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD--GNELPK---VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D--~~~~~~---~~~~ 247 (384)
..+++|++||=.|||+ |..+..++..++ ..+|+++|.+++|++.++ ++|.+.+ +... ...+.. ....
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNEF--VNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcEE--EccccCchhHHHHHHHhcC
Confidence 4578999999998754 444445555543 247999999999988664 5787643 2222 112111 1112
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEEe
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYsT 312 (384)
+.||+|+- |+|.. ..+..+++.+ ++| |+++...
T Consensus 262 gg~D~vid---~~g~~-------------------------~~~~~~~~~l----~~g~G~iv~~G 295 (378)
T 3uko_A 262 GGVDYSFE---CIGNV-------------------------SVMRAALECC----HKGWGTSVIVG 295 (378)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEECS
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hccCCEEEEEc
Confidence 37999975 43331 2467788886 996 9988643
No 323
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.25 E-value=0.022 Score=54.54 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=63.2
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc----ccCCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLNT 249 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~----~~~~~~ 249 (384)
.+++|++||=.|||+ |..+..++..++ ..+|+++|.+++|++.++ ++|.+.+. ..+. ++.. ...+..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~~i--~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADAAV--KSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSEEE--ECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCEEE--cCCC-cHHHHHHHHhCCCC
Confidence 578999999998755 444555666553 368999999999988764 57876543 2222 2211 112247
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+|+|+- |+|.. ..+..+++.| ++||+++..
T Consensus 240 ~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFD---FVGAQ-------------------------STIDTAQQVV----AVDGHISVV 269 (345)
T ss_dssp EEEEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CeEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 999875 33321 2467778876 999998864
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.23 E-value=0.085 Score=50.62 Aligned_cols=98 Identities=19% Similarity=0.259 Sum_probs=60.2
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCcc----cccC-
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELP----KVLG- 246 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~-~~~~----~~~~- 246 (384)
.++++|++||-.|||+ |..+..++..++ ..|+++|.++++++.++ .+|.+.+ +..+- .++. ....
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADVT--LVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEE--EECCTTTSCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCEE--EcCcccccHHHHHHHHhcc
Confidence 3678999999998643 333444555443 36999999999988764 5787643 22221 2221 1111
Q ss_pred --CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 247 --LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 247 --~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+..||+|+- |+|.. ..+..+++.| ++||+++..
T Consensus 236 ~~g~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (352)
T 1e3j_A 236 AIGDLPNVTID---CSGNE-------------------------KCITIGINIT----RTGGTLMLV 270 (352)
T ss_dssp HSSSCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 257999975 22221 1356677775 999998864
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.07 E-value=0.035 Score=53.85 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=60.8
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCcc----cccC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELP----KVLG 246 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~----~~~~ 246 (384)
.++++|++||-.|+|+ |..+..++..++ ...|+++|.++++++.++ ++|.+.+ +.... .++. ....
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATDF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCceE--EeccccchhHHHHHHHHhC
Confidence 3578999999998643 333444555442 237999999999988764 5787643 22211 1121 1112
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEEe
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYsT 312 (384)
+.||+|+- |+|.+ ..+..+++.+ ++| |++|...
T Consensus 261 -~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~G 294 (374)
T 1cdo_A 261 -GGVDFSLE---CVGNV-------------------------GVMRNALESC----LKGWGVSVLVG 294 (374)
T ss_dssp -SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEECS
T ss_pred -CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEEc
Confidence 37999975 33321 2456778886 999 9988643
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.05 E-value=0.049 Score=52.69 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=60.4
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCccc---ccCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPK---VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~~---~~~~ 247 (384)
.++++|++||-.|||+ |..+..++..++ ...|+++|.++++++.++ ++|.+.+. .... .++.. ....
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSEEE--CGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCceEe--ccccccccHHHHHHHHhC
Confidence 3578999999998643 333444555443 237999999999988764 57876432 2211 11111 0112
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYs 311 (384)
+.||+|+- |+|. ...+..+++++ ++| |+++..
T Consensus 259 ~g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFE---CIGN-------------------------VKVMRAALEAC----HKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEE---CSCC-------------------------HHHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCc-------------------------HHHHHHHHHhh----ccCCcEEEEE
Confidence 37999875 3332 12456778876 999 998864
No 327
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.05 E-value=0.11 Score=47.54 Aligned_cols=83 Identities=14% Similarity=0.127 Sum_probs=59.8
Q ss_pred CCceEEEeccCCC-hHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPG-GKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpG-gkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.++|=.||+.+ |.+..++..+ .....|+.+|.+++.++.+.+.++..+-..+.++..|..+..... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788888887653 5666666544 334589999999999999998888887666777788988742210 12
Q ss_pred CCCCEEEEcCCCC
Q 016730 248 NTVDRVLLDAPCS 260 (384)
Q Consensus 248 ~~fD~VllDaPCS 260 (384)
++.|.++.++...
T Consensus 85 G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 85 GNIDGVYHSIAFA 97 (256)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEeccccc
Confidence 6899999877543
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.03 E-value=0.042 Score=53.29 Aligned_cols=99 Identities=18% Similarity=0.195 Sum_probs=60.7
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCcc----cccC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELP----KVLG 246 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~----~~~~ 246 (384)
..+++|++||=.|||+ |..+..+|..++ ...|+++|.++++++.++ ++|.+.+ +..+. .++. ....
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATDC--LNPRELDKPVQDVITELTA 263 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcEE--EccccccchHHHHHHHHhC
Confidence 3578999999998643 333444555442 237999999999987764 5787643 22211 1111 1112
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEEe
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYsT 312 (384)
+.||+|+- |+|. ...+..+++++ ++| |+++...
T Consensus 264 -~g~Dvvid---~~G~-------------------------~~~~~~~~~~l----~~~~G~iv~~G 297 (376)
T 1e3i_A 264 -GGVDYSLD---CAGT-------------------------AQTLKAAVDCT----VLGWGSCTVVG 297 (376)
T ss_dssp -SCBSEEEE---SSCC-------------------------HHHHHHHHHTB----CTTTCEEEECC
T ss_pred -CCccEEEE---CCCC-------------------------HHHHHHHHHHh----hcCCCEEEEEC
Confidence 37999974 3332 12456778886 999 9998643
No 329
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.01 E-value=0.05 Score=52.70 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=57.7
Q ss_pred CCceEEEec-cCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc---ccCCCCCCE
Q 016730 178 EKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVDR 252 (384)
Q Consensus 178 ~g~~VLD~c-agp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~---~~~~~~fD~ 252 (384)
+|++||=.| +|+ |..+..++..+. ..+|+++|.+++|++.++ ++|.+.+. .... ++.. ...+..+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~vi--~~~~-~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHHVI--DHSK-PLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSEEE--CTTS-CHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCEEE--eCCC-CHHHHHHHhcCCCceE
Confidence 799998766 222 334445555433 368999999999988774 47876432 2211 1111 112357998
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|+- |+|.+ ..+..+++.| ++||+++..
T Consensus 243 vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFS---TTHTD-------------------------KHAAEIADLI----APQGRFCLI 269 (363)
T ss_dssp EEE---CSCHH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred EEE---CCCch-------------------------hhHHHHHHHh----cCCCEEEEE
Confidence 865 33321 2456777875 999999864
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.98 E-value=0.054 Score=52.47 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=60.1
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCccc---ccCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPK---VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~~---~~~~ 247 (384)
.++++|++||-.|||+ |..+..++..++ ...|+++|.++++++.++ ++|.+.+ +..+. .++.. ....
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATEC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCceE--ecccccchhHHHHHHHHhC
Confidence 3578999999998644 333444555442 237999999999988764 5787643 22211 11111 0112
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCC-cEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpG-G~lvYs 311 (384)
+.||.|+- |+|.. ..+..+++.+ ++| |+++..
T Consensus 260 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFE---VIGRL-------------------------DTMVTALSCC----QEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHHB----CTTTCEEEEC
T ss_pred CCCcEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEe
Confidence 37999875 33321 2456777875 999 998864
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.91 E-value=0.067 Score=51.65 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=61.5
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
..+++|++||=.|+|+ |..+..++..++ .+|+++|.++++++.++ ++|.+.+. ..+..++. ....+.
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~vi--~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADHGI--NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSEEE--ETTTSCHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCEEE--cCCcccHHHHHHHHhCCC
Confidence 3578999999998655 444445555543 48999999999988764 57876432 23222221 112234
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.||+|+- |+|.. .+..+++.+ ++||+++...
T Consensus 257 g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILE---IAGGA--------------------------GLGQSLKAV----APDGRISVIG 287 (363)
T ss_dssp CEEEEEE---ETTSS--------------------------CHHHHHHHE----EEEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----hcCCEEEEEe
Confidence 7998875 33311 245667775 9999988653
No 332
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.89 E-value=0.019 Score=54.19 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=55.4
Q ss_pred ceEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEE
Q 016730 229 TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (384)
Q Consensus 229 ~~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~l 308 (384)
..+.++++|+.+....+.+++||.|++|||.-...-....+... ....+-........+++..+.++| ||||.+
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~--~~~~~~~~~l~~l~~~~~~~~rvL----k~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQL--GHIEDYEAFLDELDRVWREVFRLL----VPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CC--HHHHHHHHHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhh--cccccHHHHHHHHHHHHHHHHHHc----CCCcEE
Confidence 35778899988754334457899999999985432221111100 001111222233456777777775 999999
Q ss_pred EEEeccCCcc----------ccHHHHHHHHhcCCCEEee
Q 016730 309 VYSTCSIMVT----------ENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 309 vYsTCSi~~~----------ENe~vv~~~l~~~~~~l~~ 337 (384)
+......... ..-..+..+++..++.+..
T Consensus 94 ~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 94 VIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECCEEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 7765421100 0112344556667776654
No 333
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.88 E-value=0.034 Score=54.08 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=45.1
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEE
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
.+++|++||-.|+|+ |..+..+|..++ ..|+++|.++++++.++ ++|.+.+ +..+..+...... ..||+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~-~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAK----ALGADEV--VNSRNADEMAAHL-KSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHH----HHTCSEE--EETTCHHHHHTTT-TCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEE--eccccHHHHHHhh-cCCCEE
Confidence 578999999998754 444445555543 47999999999988765 3787643 2222111111111 479998
Q ss_pred EE
Q 016730 254 LL 255 (384)
Q Consensus 254 ll 255 (384)
+-
T Consensus 262 id 263 (369)
T 1uuf_A 262 LN 263 (369)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 334
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.87 E-value=0.02 Score=55.83 Aligned_cols=129 Identities=13% Similarity=0.144 Sum_probs=72.9
Q ss_pred CceEEEeccCCChHHHHHHHH---------------ccCCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCc-
Q 016730 179 KERVIDMAAAPGGKTTYIAAL---------------MKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNEL- 241 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~---------------~~~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~- 241 (384)
.-+|+|+||++|..|+.+.+. -.+.-.|+.+|+-..-...+-+++..+.- .+..++.+....+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 367999999999988764443 12235799999988888887766643210 0223444444332
Q ss_pred ccccCCCCCCEEEEc--------CCCCCC---CcC--C--CCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCc
Q 016730 242 PKVLGLNTVDRVLLD--------APCSGT---GVI--S--KDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (384)
Q Consensus 242 ~~~~~~~~fD~VllD--------aPCSg~---G~~--~--r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG 306 (384)
...++.++||.|... +|+.-. |-+ . ..|.+.-. -..+..+.-..+|+.-.+-| +|||
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~a----y~~Qf~~D~~~FL~~Ra~EL----~pGG 203 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNA----YYKQFQEDHALFLRCRAQEV----VPGG 203 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCC----SHHHHHHHHHHHHHHHHHHB----CTTC
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHh----cCCc
Confidence 344556889999764 333211 100 0 01111111 11223333344566666664 9999
Q ss_pred EEEEEeccC
Q 016730 307 YIVYSTCSI 315 (384)
Q Consensus 307 ~lvYsTCSi 315 (384)
++|.++..-
T Consensus 204 ~mvl~~~gr 212 (359)
T 1m6e_X 204 RMVLTILGR 212 (359)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEecC
Confidence 999987644
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.81 E-value=0.14 Score=48.82 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=61.0
Q ss_pred CCCCCceEEEeccCCChH-HHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc----ccCCCC
Q 016730 175 APQEKERVIDMAAAPGGK-TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLNT 249 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgk-t~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~----~~~~~~ 249 (384)
.+++|++||=.|||+.|. +..++..++ ...++++|.+++|++.++ ++|.+.+ ++..-.+... ......
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~----~lGa~~~--i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAK----SFGAMQT--FNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHGGGCS
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHH----HcCCeEE--EeCCCCCHHHHHHhhcccCC
Confidence 578999999998876553 334444443 357889999999987664 5887643 2332222211 112256
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+|.|+- |+|.+ ..+..+++++ ++||+++..
T Consensus 230 ~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~~v~~ 259 (346)
T 4a2c_A 230 NQLILE---TAGVP-------------------------QTVELAVEIA----GPHAQLALV 259 (346)
T ss_dssp SEEEEE---CSCSH-------------------------HHHHHHHHHC----CTTCEEEEC
T ss_pred cccccc---ccccc-------------------------chhhhhhhee----cCCeEEEEE
Confidence 787765 33332 2456677775 999998864
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.70 E-value=0.12 Score=49.79 Aligned_cols=101 Identities=22% Similarity=0.176 Sum_probs=60.3
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC---Cc----cccc
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN---EL----PKVL 245 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~---~~----~~~~ 245 (384)
..+++|++||=.|||+ |..+..+|..++ ...|+++|.++++++.+++. + ..+.....|.. ++ ....
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l----~-~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI----C-PEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH----C-TTCEEEECCSCCHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh----c-hhcccccccccchHHHHHHHHHHh
Confidence 3678999999988644 334445555443 23499999999999888753 2 22222222211 11 1112
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.+..||+|+- |+|.. ..+..+++.| ++||+++...
T Consensus 249 ~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALE---CTGVE-------------------------SSIAAAIWAV----KFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECC
T ss_pred CCCCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEc
Confidence 2457999975 33321 2456777775 9999998653
No 337
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.57 E-value=0.061 Score=52.32 Aligned_cols=98 Identities=19% Similarity=0.220 Sum_probs=59.2
Q ss_pred C-CCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecC---CCCc----cccc
Q 016730 175 A-PQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKVL 245 (384)
Q Consensus 175 ~-~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D---~~~~----~~~~ 245 (384)
+ +++|++||-.|+|+ |..+..+|..++ ..+|+++|.++++++.++ ++|.+.+ +..+ ..++ ....
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 191 PESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADLT--LNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp SSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcEE--EeccccCcchHHHHHHHHh
Confidence 5 78999999999543 223334444432 138999999999988765 5787643 2222 1111 1111
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+..||+|+- |+|.+ ..+..+++.| ++||+++..
T Consensus 264 ~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 297 (380)
T 1vj0_A 264 HGRGADFILE---ATGDS-------------------------RALLEGSELL----RRGGFYSVA 297 (380)
T ss_dssp TTSCEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred CCCCCcEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 2246999875 33321 1356677776 999998754
No 338
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.55 E-value=0.13 Score=48.92 Aligned_cols=98 Identities=17% Similarity=0.140 Sum_probs=62.1
Q ss_pred CCCCCceEEEeccCCChH-HHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc----ccccCCCC
Q 016730 175 APQEKERVIDMAAAPGGK-TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL----PKVLGLNT 249 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgk-t~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~----~~~~~~~~ 249 (384)
.+++|++||=.|||++|- +..++..+. ..+|+++|.+++|++.+ +++|.+.+. +....++ .....+..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~----~~~Ga~~~i--~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLA----KKIGADVTI--NSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHH----HHTTCSEEE--EC-CCCHHHHHHHHTTSSC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhh----hhcCCeEEE--eCCCCCHHHHhhhhcCCCC
Confidence 578999999999987653 334444443 36899999999997655 457876432 2222222 11123356
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+|.++.++. .+ ..+..+++.+ ++||+++..
T Consensus 233 ~d~~~~~~~---~~-------------------------~~~~~~~~~l----~~~G~~v~~ 262 (348)
T 4eez_A 233 VQSAIVCAV---AR-------------------------IAFEQAVASL----KPMGKMVAV 262 (348)
T ss_dssp EEEEEECCS---CH-------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred ceEEEEecc---Cc-------------------------chhheeheee----cCCceEEEE
Confidence 888877543 21 2456677776 999998764
No 339
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.40 E-value=0.073 Score=50.87 Aligned_cols=96 Identities=13% Similarity=0.024 Sum_probs=56.3
Q ss_pred eEEEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEE
Q 016730 230 NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (384)
Q Consensus 230 ~v~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lv 309 (384)
...++++|+......+..++||.|++|||.....- . .+ ...............|..+.++| ||||.++
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~-~-----~y--~~~~~~~~~~~l~~~l~~~~rvL----k~~G~i~ 81 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRK-K-----EY--GNLEQHEYVDWFLSFAKVVNKKL----KPDGSFV 81 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCS-C-----SS--CSCHHHHHHHHHHHHHHHHHHHE----EEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcc-c-----cc--CCcCHHHHHHHHHHHHHHHHHHC----cCCcEEE
Confidence 46778899876433344578999999999843210 0 01 11122334444556777777775 9999998
Q ss_pred EEeccCCccc-------cHHHHHHHHhcCCCEEee
Q 016730 310 YSTCSIMVTE-------NEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 310 YsTCSi~~~E-------Ne~vv~~~l~~~~~~l~~ 337 (384)
........+. +-..+..+++..++.+..
T Consensus 82 i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 82 VDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCEecCCCcccccchHHHHHHHHHhCCCEEEE
Confidence 7654321111 223333455677877654
No 340
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.38 E-value=0.046 Score=54.11 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=35.1
Q ss_pred ceEEEeccCCChHHHHHHHHccCCce----EEEEeCCHHHHHHHHHHHH
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKNTGL----IYANEMKASRLKSLTANLH 224 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~~g~----V~a~D~~~~rl~~l~~n~~ 224 (384)
-+|+|+|||-||.+..+-+.-.+-.. |.|+|+++..++..+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 48999999999988877654211123 8999999999999888874
No 341
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.24 E-value=0.091 Score=48.77 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=83.2
Q ss_pred CCceEEEeccCCChHHHHHHHHc------cCCceEEEEeC-----CH----------------------HHHHH---HHH
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM------KNTGLIYANEM-----KA----------------------SRLKS---LTA 221 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~------~~~g~V~a~D~-----~~----------------------~rl~~---l~~ 221 (384)
|| .|+++|+.-|+-+..++++. ....+|+++|. .. +.+.. +.+
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 56 79999999999888877642 13468999992 21 11222 223
Q ss_pred HHHHcCC--ceEEEEecCCCCc-ccc---cCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH
Q 016730 222 NLHRMGV--TNTIVCNYDGNEL-PKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI 295 (384)
Q Consensus 222 n~~r~g~--~~v~~~~~D~~~~-~~~---~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~ 295 (384)
|.+++|. .++.++.+++.+. +.. .+..+||.|.+|+-- -.-.+..++.++
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~------------------------Y~~t~~~le~~~ 204 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL------------------------YEPTKAVLEAIR 204 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC------------------------HHHHHHHHHHHG
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc------------------------cchHHHHHHHHH
Confidence 3345775 6799999998764 221 223579999999740 011234566677
Q ss_pred HchhccCCCCcEEEEEeccC--CccccHHHHHHHHhcCCCEEeec
Q 016730 296 DMVDANSKSGGYIVYSTCSI--MVTENEAVIDYALKKRDVKLVPC 338 (384)
Q Consensus 296 ~~L~~~lkpGG~lvYsTCSi--~~~ENe~vv~~~l~~~~~~l~~~ 338 (384)
..| +|||.+|+--... .+.+.+++ +.++.+++.++...
T Consensus 205 p~l----~~GGvIv~DD~~~~~w~G~~~A~-~ef~~~~~~~i~~~ 244 (257)
T 3tos_A 205 PYL----TKGSIVAFDELDNPKWPGENIAM-RKVLGLDHAPLRLL 244 (257)
T ss_dssp GGE----EEEEEEEESSTTCTTCTHHHHHH-HHHTCTTSSCCEEC
T ss_pred HHh----CCCcEEEEcCCCCCCChHHHHHH-HHHHhhCCCeEEEc
Confidence 775 9999999877532 45554444 66777766555443
No 342
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.88 E-value=0.13 Score=56.57 Aligned_cols=82 Identities=22% Similarity=0.268 Sum_probs=55.7
Q ss_pred CceEEEeccCCChHHHHHHHHccCC-ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc------------c-cc
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL------------P-KV 244 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~------------~-~~ 244 (384)
.-+++|++||.||.+.-+.+. +- -.|.|+|+++..++..+.|.. +..++..|...+ . ..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----CCccccccHHHHhhhccchhhhhhhhhh
Confidence 347999999999998877654 21 258899999999998887742 233444443211 0 01
Q ss_pred c-CCCCCCEEEEcCCCCCCCcCCC
Q 016730 245 L-GLNTVDRVLLDAPCSGTGVISK 267 (384)
Q Consensus 245 ~-~~~~fD~VllDaPCSg~G~~~r 267 (384)
+ ..+.+|+|+.-|||.+.-...+
T Consensus 613 lp~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 613 LPQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp CCCTTTCSEEEECCCCTTCCSSSC
T ss_pred cccCCCeeEEEEcCCCcchhhhCC
Confidence 1 1247999999999987765543
No 343
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.75 E-value=0.081 Score=50.67 Aligned_cols=91 Identities=21% Similarity=0.236 Sum_probs=55.1
Q ss_pred CCceEEEeccCCChHHH---HHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc---ccCCCCCC
Q 016730 178 EKERVIDMAAAPGGKTT---YIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVD 251 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~---~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~---~~~~~~fD 251 (384)
+|++||=.+ |.|+.+. .++...+ .+|++++.++++++.+++ +|.+.+. ..+. ++.. ...+..||
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~vi--~~~~-~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADIVL--NHKE-SLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSEEE--CTTS-CHHHHHHHHTCCCEE
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEEE--ECCc-cHHHHHHHhCCCCcc
Confidence 899998663 3444444 4444432 489999999999887764 6876432 2221 1111 11235799
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEE
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvY 310 (384)
+|+- |+|.. ..+..+++.| ++||++|.
T Consensus 220 vv~d---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~ 246 (346)
T 3fbg_A 220 YVFC---TFNTD-------------------------MYYDDMIQLV----KPRGHIAT 246 (346)
T ss_dssp EEEE---SSCHH-------------------------HHHHHHHHHE----EEEEEEEE
T ss_pred EEEE---CCCch-------------------------HHHHHHHHHh----ccCCEEEE
Confidence 8875 33321 2456777776 99999964
No 344
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.70 E-value=0.24 Score=51.88 Aligned_cols=130 Identities=16% Similarity=0.091 Sum_probs=79.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-----------CCceEEEEeC---CHHHHHHHH-----------HHHHHc-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-----------NTGLIYANEM---KASRLKSLT-----------ANLHRM-----G 227 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-----------~~g~V~a~D~---~~~rl~~l~-----------~n~~r~-----g 227 (384)
+.-+|||+|-|+|.-.+...+... ..-+++++|. +++-+..+- +.++.+ |
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345899999999998776665531 1135899999 776665322 222222 1
Q ss_pred C---------ceEEEEecCCCCcccccC---CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHH
Q 016730 228 V---------TNTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI 295 (384)
Q Consensus 228 ~---------~~v~~~~~D~~~~~~~~~---~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~ 295 (384)
+ -.+.+..+|+......+. ...||.|++|+- ...++|++ |+. +++....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f-----~p~~np~~---w~~-----------~~~~~l~ 206 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF-----APAKNPDM---WTQ-----------NLFNAMA 206 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS-----CGGGCGGG---SCH-----------HHHHHHH
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC-----CCcCChhh---hhH-----------HHHHHHH
Confidence 1 113345567665322221 257999999984 23567774 333 3556666
Q ss_pred HchhccCCCCcEEEEEeccCCccccHHHHHHHHhcCCCEEee
Q 016730 296 DMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 296 ~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
+++ +|||++...+|. ..|...|.+.++.+..
T Consensus 207 ~~~----~~g~~~~t~~~~-------~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 207 RLA----RPGGTLATFTSA-------GFVRRGLQDAGFTMQK 237 (676)
T ss_dssp HHE----EEEEEEEESCCC-------HHHHHHHHHHTCEEEE
T ss_pred HHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 664 999998654443 4677777777776554
No 345
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.70 E-value=0.056 Score=52.11 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=45.2
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CcccccCCCCCCE
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVDR 252 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~-~~~~~~~~~~fD~ 252 (384)
++++|++||-.|+|+ |..+..++..++ .+|+++|.++++++.++ ++|.+.+. ..+.. ++..... +.||+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v~--~~~~~~~~~~~~~-~~~D~ 246 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAM----KMGADHYI--ATLEEGDWGEKYF-DTFDL 246 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHH----HHTCSEEE--EGGGTSCHHHHSC-SCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH----HcCCCEEE--cCcCchHHHHHhh-cCCCE
Confidence 578999999999843 333445555543 47999999999887765 37876432 22211 2211121 47999
Q ss_pred EEE
Q 016730 253 VLL 255 (384)
Q Consensus 253 Vll 255 (384)
|+-
T Consensus 247 vid 249 (360)
T 1piw_A 247 IVV 249 (360)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 346
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.69 E-value=0.55 Score=45.88 Aligned_cols=74 Identities=11% Similarity=0.072 Sum_probs=45.5
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLNT 249 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~~ 249 (384)
.+++|++||=.|||+ |..+..+|..++ ...|+++|.+++|++.++ ++|.+.+ +..+..++. ....+..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAK----ELGADHV--IDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSEE--ECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCEE--EcCCCCCHHHHHHHHhCCCC
Confidence 578999999888643 333334444442 238999999999988764 5787633 333222221 1122347
Q ss_pred CCEEEE
Q 016730 250 VDRVLL 255 (384)
Q Consensus 250 fD~Vll 255 (384)
+|+|+-
T Consensus 283 ~D~vid 288 (404)
T 3ip1_A 283 AKLFLE 288 (404)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999975
No 347
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.68 E-value=0.094 Score=56.11 Aligned_cols=46 Identities=17% Similarity=0.157 Sum_probs=35.8
Q ss_pred CCceEEEeccCCChHHHHHHHHccC----CceEEEEeCCHHHHHHHHHHH
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN----TGLIYANEMKASRLKSLTANL 223 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~----~g~V~a~D~~~~rl~~l~~n~ 223 (384)
+..+|||++||.||.++-+.+.... --.+.|+|+++..++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3457999999999999877664211 026899999999999998883
No 348
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.41 E-value=1.1 Score=41.52 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=74.1
Q ss_pred CCceEEEeccCCC-hHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPG-GKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpG-gkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.|++.| |.+.+++..+ .....|+.++.++...+.+.+..+..+ .+.++..|..+..... ..
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5778888888754 4666666644 334589999999776666666666655 4677788988753210 12
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+..|.++.+|--...+.+ ..| ....+.++.... ..-...+++.++..+ +.+|++|+.+.
T Consensus 108 g~iD~lVnnAG~~~~~~~-~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDEL-TGR--YIDTSEANFTNTMLISVYSLTAVSRRAEKLM----ADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHHHH-TSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT----TTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcccc-ccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEEee
Confidence 579999987642220000 011 112233333322 222334556666664 77899987654
No 349
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.36 E-value=0.063 Score=51.31 Aligned_cols=51 Identities=12% Similarity=0.124 Sum_probs=40.9
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCc
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT 229 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~ 229 (384)
-.+|+.|||.+||+|.. ++.|..++ -..+++|+++..++.+++++++.+..
T Consensus 250 ~~~~~~VlDpF~GsGtt-~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~~ 300 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTT-GLVAERES--RKWISFEMKPEYVAASAFRFLDNNIS 300 (323)
T ss_dssp CCTTCEEEETTCTTCHH-HHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSCSC
T ss_pred CCCCCEEEECCCCCCHH-HHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcccc
Confidence 46899999999999974 44455543 48999999999999999998876653
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.35 E-value=0.072 Score=50.94 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=60.1
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCc-ccccCCCCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NEL-PKVLGLNTVD 251 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~-~~~-~~~~~~~~fD 251 (384)
++ +|++||-.|+|+ |..+..++..+.+..+|+++|.++++++.++ ++|.+.+. ..+. .+. .....+..||
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~vi--~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYVS--EMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEEE--CHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEEe--ccccchHHHHHhhcCCCcc
Confidence 66 899999999854 3344555555510247999999999987765 46876432 2111 011 1111224799
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.|+- |+|.. ..+..+++.+ ++||+++...
T Consensus 241 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAID---LVGTE-------------------------ETTYNLGKLL----AQEGAIILVG 269 (344)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred EEEE---CCCCh-------------------------HHHHHHHHHh----hcCCEEEEeC
Confidence 9975 33321 2456677776 9999988643
No 351
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.32 E-value=0.67 Score=41.73 Aligned_cols=122 Identities=11% Similarity=0.097 Sum_probs=74.6
Q ss_pred CCceEEEeccCCChHHHHHHHHcc--CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK--NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~--~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.+.+|| +..|+|+.+.+++..+. ....|+.++.+..+++.+.+.+...|. ++.++..|..+.... . ..
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 355677 45577888888887553 345899999999988888888877663 466778898875321 1 01
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCC-HHHHH----HHHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKS-LEDIQ----KCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~-~~~i~----~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.|+..|-....+.. ... .++.. ....-...+++.+...+ +++|++|+.+.
T Consensus 81 g~id~li~~Ag~~~~~~~--------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~~sS 139 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVAD--------PTPFHIQAEVTMKTNFFGTRDVCTELLPLI----KPQGRVVNVSS 139 (276)
T ss_dssp SSEEEEEECCCCCCCTTC--------CSCHHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEECC
T ss_pred CCCCEEEECCcccccCCC--------ccccHHHHHhhhheeeeeHHHHHHHHHHhh----CCCCEEEEECC
Confidence 378999987643322211 011 12221 22222334556666654 66789988765
No 352
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.32 E-value=2.2 Score=39.54 Aligned_cols=82 Identities=13% Similarity=-0.020 Sum_probs=53.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEE-ecCCCCcccccC-CCCCCEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPKVLG-LNTVDRVL 254 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~-~~D~~~~~~~~~-~~~fD~Vl 254 (384)
+|.+|| +.-|+|+.+.+++..+. ....|++++.+......+...+....-.++.++ .+|..+...... ...+|.|+
T Consensus 10 ~~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVL-VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 467888 44567888998887553 335899999998887766655443211356666 688876432211 13689999
Q ss_pred EcCCCC
Q 016730 255 LDAPCS 260 (384)
Q Consensus 255 lDaPCS 260 (384)
..+..+
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 877543
No 353
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.24 E-value=1 Score=40.22 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=55.8
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||= ..|+|+.+.+++..+-. ...|++++.++.+++.+.+.+...+. ++.++..|..+.... . ..+
T Consensus 10 ~~~~vlV-tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAII-TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEE-TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEE-ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 3567774 45678888888876543 35899999999998888877776664 466778898864321 1 013
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.|+..+..
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999986643
No 354
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.15 E-value=0.53 Score=43.84 Aligned_cols=140 Identities=16% Similarity=0.137 Sum_probs=77.7
Q ss_pred EeCCcCcchhhhcCCCCCceEEEeccCC-ChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC
Q 016730 162 LQSASSFLPVMALAPQEKERVIDMAAAP-GGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (384)
Q Consensus 162 ~Qd~ss~l~~~~L~~~~g~~VLD~cagp-Ggkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~ 239 (384)
.|.++|+-....+ .|.+||=.|++. +|.+.+++..+ .....|+.+|.+.+..+.+.+..+..|- +.++..|..
T Consensus 16 ~~gp~sm~~~~~l---~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~ 90 (296)
T 3k31_A 16 TQGPGSMRTGMLM---EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVS 90 (296)
T ss_dssp -----CCCCCCTT---TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTT
T ss_pred ccCCccccchhcc---CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCC
Confidence 3556666443333 477888888764 46777777654 3345899999998777777766666653 466778988
Q ss_pred Cccccc--------CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcE
Q 016730 240 ELPKVL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGY 307 (384)
Q Consensus 240 ~~~~~~--------~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~ 307 (384)
+..... ..+.+|.++.+|-......+. .| ....+.++..... .-...+++.+...+ +.+|+
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m----~~~g~ 163 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELK-GR--YVDTSLGNFLTSMHISCYSFTYIASKAEPLM----TNGGS 163 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC----TTCEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCccccc-CC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHh----hcCCE
Confidence 753210 114789999876432210000 01 1122333333222 22334555566654 77899
Q ss_pred EEEEec
Q 016730 308 IVYSTC 313 (384)
Q Consensus 308 lvYsTC 313 (384)
+|+.+.
T Consensus 164 IV~isS 169 (296)
T 3k31_A 164 ILTLSY 169 (296)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 987654
No 355
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.10 E-value=0.22 Score=47.38 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=47.8
Q ss_pred cCCCCCceEEEeccC--CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCC
Q 016730 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cag--pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~ 247 (384)
..+++|++||-.||| -|..+..++...+ .+|+++|.++++++.+++ +|.+.+ +.....++. ....+
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~~--~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAYV--IDTSTAPLYETVMELTNG 211 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcEE--EeCCcccHHHHHHHHhCC
Confidence 467899999998876 3555556666553 489999999998887754 677643 222222221 11223
Q ss_pred CCCCEEEE
Q 016730 248 NTVDRVLL 255 (384)
Q Consensus 248 ~~fD~Vll 255 (384)
..||+|+-
T Consensus 212 ~g~Dvvid 219 (340)
T 3gms_A 212 IGADAAID 219 (340)
T ss_dssp SCEEEEEE
T ss_pred CCCcEEEE
Confidence 47998875
No 356
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.09 E-value=0.06 Score=50.80 Aligned_cols=66 Identities=6% Similarity=0.018 Sum_probs=44.0
Q ss_pred cCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCE
Q 016730 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 174 L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
..+++|++||=.|||+ |..+..++..++ .+|++++ ++++++.++ ++|.+.+. + | ... . +..||+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~v~--~-d---~~~-v-~~g~Dv 202 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRHLY--R-E---PSQ-V-TQKYFA 202 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEEEE--S-S---GGG-C-CSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCEEE--c-C---HHH-h-CCCccE
Confidence 3578999999888843 444445555553 4899999 988887764 47875432 3 4 222 2 468998
Q ss_pred EE
Q 016730 253 VL 254 (384)
Q Consensus 253 Vl 254 (384)
|+
T Consensus 203 v~ 204 (315)
T 3goh_A 203 IF 204 (315)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 357
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.02 E-value=1.1 Score=40.71 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=75.3
Q ss_pred CCceEEEeccC-CChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAA-PGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cag-pGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.|++ . |.+.+++..+ .....|+.++.+..+++.+.+.+...+-.++.++..|..+..... ..
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 46678866663 3 4556666543 334589999999999999888887766567888899998753211 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.++..|--+..+.+ ...+.++..... .-...+++.++..+.. -+.+|++|+.+.
T Consensus 100 g~id~li~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS 161 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPV-------VDMTDEEWDRVLNVTLTSVMRATRAALRYFRG-VDHGGVIVNNAS 161 (266)
T ss_dssp SCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-SSCCEEEEEECC
T ss_pred CCCcEEEECCCcCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCeEEEEeCC
Confidence 478999997653332221 122333333222 2223445555554410 025678877643
No 358
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.71 E-value=0.48 Score=44.24 Aligned_cols=81 Identities=20% Similarity=0.206 Sum_probs=56.9
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||= .-|.||.+.+++..+- ....|+.+|.+..+++.+.+.+...+..++.++..|..+..... ..+
T Consensus 40 ~~k~vlV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLV-TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEE-TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 3566774 4456777887777553 34589999999999888888887766556888889998753210 114
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.++.+|--
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 359
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.47 E-value=0.79 Score=41.47 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=73.4
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cC-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG-----L 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~-----~ 247 (384)
.|.+|| +..|+|+.+.+++..+.. ...|++++. ++..++.+.+.+...|. ++.++..|..+.... .. .
T Consensus 20 ~~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 366777 455678888888876543 348999998 88888888777777664 466778898875321 10 1
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.|+..+.....+.+ ...+.++.... ..-...+++.+...+ +.||++|+.+.
T Consensus 98 ~~~d~vi~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~iv~~sS 156 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDE-------LEVTQELFDKVFNLNTRGQFFVAQQGLKHC----RRGGRIILTSS 156 (274)
T ss_dssp SCEEEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHE----EEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCEEEEEcC
Confidence 368999876643322211 12233333222 222334555556654 45688887653
No 360
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.45 E-value=0.21 Score=43.41 Aligned_cols=99 Identities=20% Similarity=0.238 Sum_probs=57.5
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
.++++|++||-.|++ |+.+..++++... ..+|+++|.++++++.++ .+|...+ +..+..+.. ......
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEYV--GDSRSVDFADEILELTDGY 106 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSEE--EETTCSTHHHHHHHHTTTC
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCEE--eeCCcHHHHHHHHHHhCCC
Confidence 467889999988853 4444444443321 258999999998887654 3576432 222111111 111224
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.+|.|+.. .|. ..+..+++.+ ++||++|...
T Consensus 107 ~~D~vi~~---~g~--------------------------~~~~~~~~~l----~~~G~~v~~g 137 (198)
T 1pqw_A 107 GVDVVLNS---LAG--------------------------EAIQRGVQIL----APGGRFIELG 137 (198)
T ss_dssp CEEEEEEC---CCT--------------------------HHHHHHHHTE----EEEEEEEECS
T ss_pred CCeEEEEC---Cch--------------------------HHHHHHHHHh----ccCCEEEEEc
Confidence 69998852 221 0245677775 9999988643
No 361
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.31 E-value=0.27 Score=46.97 Aligned_cols=98 Identities=18% Similarity=0.121 Sum_probs=58.8
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHcc--CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc----ccCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMK--NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~--~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~----~~~~ 247 (384)
.++ +|++||-.|+ |+.+..++++.. +..+|+++|.++++++.++ ++|.+.+ +..+..++.. ...+
T Consensus 164 ~~~-~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 164 GPI-SGKSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGADYV--INPFEEDVVKEVMDITDG 234 (348)
T ss_dssp SCC-TTCCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTCSEE--ECTTTSCHHHHHHHHTTT
T ss_pred cCC-CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCEE--ECCCCcCHHHHHHHHcCC
Confidence 356 8999999998 454444444332 2237999999999987765 4677533 2332222211 1122
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
..+|.|+- |+|. ...+..+++.+ ++||+++...
T Consensus 235 ~g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 267 (348)
T 2d8a_A 235 NGVDVFLE---FSGA-------------------------PKALEQGLQAV----TPAGRVSLLG 267 (348)
T ss_dssp SCEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEECC
T ss_pred CCCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEEc
Confidence 46999875 3222 12456677775 9999987643
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.29 E-value=0.26 Score=46.96 Aligned_cols=73 Identities=23% Similarity=0.327 Sum_probs=45.4
Q ss_pred CCCCCceEEEecc--CCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 175 ~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
++++|++||-.|+ |.|..+..++...+ .+|+++|.++++++.++ .+|.+.+ +..+..++. ....+.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~----~~ga~~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK----ALGADET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EcCCcccHHHHHHHHhCCC
Confidence 5778999999998 33444445555443 48999999999988775 3676543 222211211 111224
Q ss_pred CCCEEEE
Q 016730 249 TVDRVLL 255 (384)
Q Consensus 249 ~fD~Vll 255 (384)
.+|.|+-
T Consensus 235 ~~d~vi~ 241 (343)
T 2eih_A 235 GADKVVD 241 (343)
T ss_dssp CEEEEEE
T ss_pred CceEEEE
Confidence 7999876
No 363
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.27 E-value=0.13 Score=49.39 Aligned_cols=95 Identities=9% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCCCC------ceEEEeccCCChHHHHH-HHHc-cCCc-e-EEEEeCCHH---HHHHHHHHHHHcCCceEEEEecCCCCc
Q 016730 175 APQEK------ERVIDMAAAPGGKTTYI-AALM-KNTG-L-IYANEMKAS---RLKSLTANLHRMGVTNTIVCNYDGNEL 241 (384)
Q Consensus 175 ~~~~g------~~VLD~cagpGgkt~~l-a~~~-~~~g-~-V~a~D~~~~---rl~~l~~n~~r~g~~~v~~~~~D~~~~ 241 (384)
.+++| ++||=.|+ |+.+... .++. +..| . |+++|.+++ +++.++ ++|.+.+ ..+..++
T Consensus 163 ~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v---~~~~~~~ 233 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDATYV---DSRQTPV 233 (357)
T ss_dssp HHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCEEE---ETTTSCG
T ss_pred CCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCccc---CCCccCH
Confidence 46789 99999997 6666655 5555 4323 4 999999988 887664 5787644 2222222
Q ss_pred cc--ccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 242 PK--VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 242 ~~--~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.. ... +.||.|+- |+|.. ..+..+++.+ ++||+++..
T Consensus 234 ~~i~~~~-gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 272 (357)
T 2b5w_A 234 EDVPDVY-EQMDFIYE---ATGFP-------------------------KHAIQSVQAL----APNGVGALL 272 (357)
T ss_dssp GGHHHHS-CCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred HHHHHhC-CCCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 11 112 37999874 33321 1356677776 999998864
No 364
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.25 E-value=0.17 Score=48.21 Aligned_cols=99 Identities=19% Similarity=0.258 Sum_probs=58.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCcccc---cCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKV---LGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~~---~~~~ 248 (384)
.++++|++||-.|| .|+.+..++++.. ...+|++++.++++++.+++ ++|...+ +.. +..++... ....
T Consensus 151 ~~~~~g~~vlI~Ga-~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 151 CSPKEGETVYVSAA-SGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFDDA--FNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCSEE--EETTSCSCSHHHHHHHCTT
T ss_pred hCCCCCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCceE--EecCCHHHHHHHHHHHhCC
Confidence 35789999998886 2344444444332 12489999999998877652 3576532 222 11122111 1124
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+|.|+-.+. . ..+..+++.+ ++||+++..
T Consensus 225 ~~d~vi~~~g---~--------------------------~~~~~~~~~l----~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVG---G--------------------------KMLDAVLVNM----NMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSC---H--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CCcEEEECCC---H--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 6999875322 0 1356677776 999998854
No 365
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.25 E-value=0.22 Score=47.39 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=59.1
Q ss_pred CCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccC--CCCCC
Q 016730 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--LNTVD 251 (384)
Q Consensus 175 ~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~--~~~fD 251 (384)
.+++|++||-.|+|+ |..+..++..++ .+|+++|.++++++.++ ++|.+.+ +.....++..... ...+|
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGADLV--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCSEE--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCCEE--ecCCCccHHHHHHHHhCCCC
Confidence 578999999999854 333444444442 48999999999988764 4787532 2222112111000 03689
Q ss_pred EEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 252 ~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.|+- |+|.. ..+..+++.+ ++||+++..
T Consensus 233 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 260 (339)
T 1rjw_A 233 AAVV---TAVSK-------------------------PAFQSAYNSI----RRGGACVLV 260 (339)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEE---CCCCH-------------------------HHHHHHHHHh----hcCCEEEEe
Confidence 8875 33321 1356677775 999998754
No 366
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.16 E-value=3 Score=37.79 Aligned_cols=125 Identities=11% Similarity=0.075 Sum_probs=73.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHH-cCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r-~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++.+..+++.+.+.+.. .+-.++.++..|..+..... ..
T Consensus 7 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTG-GSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 356677555 45667777776543 345899999999999988888776 55455788889988753210 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+..|.++.++--+..+.+. ..+.++... ...-...+++.++..+. -+.+|++|+.+
T Consensus 86 g~id~lvnnAg~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~--~~~~g~iv~is 145 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFA-------ETTDEAWSEELQLKFFSVIHPVRAFLPQLE--SRADAAIVCVN 145 (265)
T ss_dssp CSCSEEEECCCCCCCBCTT-------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHT--TSTTEEEEEEE
T ss_pred CCCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccCCeEEEEEC
Confidence 4789999877533322221 123333322 22223344555555541 03367787654
No 367
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.99 E-value=0.22 Score=47.15 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=58.1
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cCCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNT 249 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~~~~ 249 (384)
.++++|++||-.||+ |+.+..+++++. ....|+++|.++++++.+ +++|...+ +-..|...+... ...+.
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~~-~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQIGFDAA-FNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE-EETTSCSCHHHHHHHHCTTC
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCcEE-EecCCHHHHHHHHHHHhCCC
Confidence 357889999998863 444444444432 224899999999888766 34576432 211121121110 11146
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
+|.|+-.+. . ..+..+++.+ ++||+++..
T Consensus 215 ~d~vi~~~g---~--------------------------~~~~~~~~~l----~~~G~~v~~ 243 (333)
T 1v3u_A 215 YDCYFDNVG---G--------------------------EFLNTVLSQM----KDFGKIAIC 243 (333)
T ss_dssp EEEEEESSC---H--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CeEEEECCC---h--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 999876432 0 1256677776 999998864
No 368
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.97 E-value=0.16 Score=48.49 Aligned_cols=49 Identities=14% Similarity=0.116 Sum_probs=36.4
Q ss_pred CCCCceEEEeccCCChHHHHHHHHccCCceEEEEeCCH---HHHHHHHHHHHHcC
Q 016730 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA---SRLKSLTANLHRMG 227 (384)
Q Consensus 176 ~~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~---~rl~~l~~n~~r~g 227 (384)
-.+|+.|||.+||+|..+. .|..++ -..+++|+++ .-++.+++++.+.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~-aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTAR-VAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHH-HHHHHT--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHH-HHHHcC--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4689999999999997544 444443 4799999999 99999999887765
No 369
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.96 E-value=0.33 Score=46.51 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=58.1
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc---CCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNT 249 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~---~~~~ 249 (384)
..+++|++||=.| |.|+.+..++++... ..+|+++|.++++++.+++ +|...+ +..+..++.... .+..
T Consensus 163 ~~~~~g~~VlV~G-g~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~--~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 163 AGLTEGESVLIHG-GTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRG--INYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp TCCCTTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHSSC
T ss_pred cCCCCCCEEEEEc-CCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEE--EeCCchHHHHHHHHHhCCC
Confidence 3578999999663 344444433333221 2489999999999887754 676543 233222221110 1357
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+|.|+- |+|.. .+..+++.+ ++||+++...
T Consensus 236 ~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILD---MIGAA--------------------------YFERNIASL----AKDGCLSIIA 265 (353)
T ss_dssp EEEEEE---SCCGG--------------------------GHHHHHHTE----EEEEEEEECC
T ss_pred ceEEEE---CCCHH--------------------------HHHHHHHHh----ccCCEEEEEE
Confidence 998875 33321 245567775 9999988643
No 370
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.86 E-value=1.7 Score=39.25 Aligned_cols=129 Identities=14% Similarity=0.093 Sum_probs=75.7
Q ss_pred CCceEEEeccCCC-hHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPG-GKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpG-gkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.|++.| |.+.+++..+ .....|+.++.+....+.+.+..+..+-.++.++..|..+..... ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4677887777643 3566666544 334589999998777777777777766556788889998753211 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.++..+.....+.. +.-....+.++..... .-...+++.+...+ +++|++|+.+.
T Consensus 86 g~id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~g~iv~isS 148 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEEL---VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMM----TEGGSIVTLTY 148 (266)
T ss_dssp SCCCEEEECCCCCCGGGG---SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC----TTCEEEEEEEC
T ss_pred CCeeEEEEcccccccccc---ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhc----CCCceEEEEec
Confidence 478999987754331100 0011122333333222 22333555566654 77899887664
No 371
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.85 E-value=0.56 Score=52.95 Aligned_cols=82 Identities=23% Similarity=0.268 Sum_probs=55.0
Q ss_pred CceEEEeccCCChHHHHHHHHccCC-ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc-------------ccc
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-------------PKV 244 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~-------------~~~ 244 (384)
.-+|+|++||.||.+.-+-+. +- -.|.|+|+++..++..+.|.. +..+.+.|...+ ...
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP-----GTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----CCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 457999999999988876553 11 258899999999999888742 223334443211 001
Q ss_pred c-CCCCCCEEEEcCCCCCCCcCCC
Q 016730 245 L-GLNTVDRVLLDAPCSGTGVISK 267 (384)
Q Consensus 245 ~-~~~~fD~VllDaPCSg~G~~~r 267 (384)
+ ..+.+|+|+--|||-+.-...+
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSSC
T ss_pred ccccCccceEEecCCCcccccccc
Confidence 1 1246999999999977765543
No 372
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.36 E-value=0.16 Score=48.17 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=58.3
Q ss_pred cCCCCCceEEEeccC--CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cCCC
Q 016730 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cag--pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~~~ 248 (384)
..+++|++||-.||+ -|..+..++...+ .+|++++.++++++.+. +.+|...+ +.....++... ..++
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGFDGA--IDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCCSEE--EETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCCCEE--EECCCHHHHHHHHHhcCC
Confidence 367899999977763 2333334444332 48999999999887763 34677532 22222222110 1125
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+|.|+- |+|. ..+..+++.+ ++||+++..
T Consensus 218 ~~d~vi~---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 247 (336)
T 4b7c_A 218 GIDVFFD---NVGG--------------------------EILDTVLTRI----AFKARIVLC 247 (336)
T ss_dssp CEEEEEE---SSCH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CceEEEE---CCCc--------------------------chHHHHHHHH----hhCCEEEEE
Confidence 7998875 2221 1456777776 999998864
No 373
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.32 E-value=1.5 Score=40.26 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=59.3
Q ss_pred CCCCcccccceEEEeCCcCcchhhhcCCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcC
Q 016730 149 IGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMG 227 (384)
Q Consensus 149 ~~~~~~~~~G~~~~Qd~ss~l~~~~L~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g 227 (384)
...+|.|..| ++++-....++. .|.+||=.|+ .||.+.+++..+. ....|+.++.++++++.+.+.+...|
T Consensus 9 ~~~~~~~~~g------~~~m~~~~~~~l-~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~ 80 (276)
T 3r1i_A 9 MGTLEAQTQG------PGSMSVLDLFDL-SGKRALITGA-STGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG 80 (276)
T ss_dssp --------------------CGGGGGCC-TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT
T ss_pred ccceeccccC------CCCcccccccCC-CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 3456666555 444433333333 4677775554 5677777776553 34589999999999999888888776
Q ss_pred CceEEEEecCCCCcccc---c-----CCCCCCEEEEcCCC
Q 016730 228 VTNTIVCNYDGNELPKV---L-----GLNTVDRVLLDAPC 259 (384)
Q Consensus 228 ~~~v~~~~~D~~~~~~~---~-----~~~~fD~VllDaPC 259 (384)
. ++.++..|..+.... . ..+..|.++.+|-.
T Consensus 81 ~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 81 G-KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp C-CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred C-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5 466678898875321 1 01479999997753
No 374
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.30 E-value=0.13 Score=47.29 Aligned_cols=90 Identities=10% Similarity=0.085 Sum_probs=49.6
Q ss_pred EEEecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 232 ~~~~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.++++|+......+..++||.|++|||.... . +.-+ .+. + .......-..+|..+.++| +|||.++..
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~-~--~~~d-~~~-~---~~~y~~~~~~~l~~~~~~L----k~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLS-K--ADWD-SFD-S---HNEFLAFTYRWIDKVLDKL----DKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSC-S--SGGG-CCS-S---HHHHHHHHHHHHHHHHHHE----EEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCC-c--cccc-ccC-C---HHHHHHHHHHHHHHHHHHh----cCCeEEEEE
Confidence 4557887654333444789999999998422 1 0000 000 1 2223334455677777765 999999877
Q ss_pred eccCCccccHHHHHHHHhcCCCEEee
Q 016730 312 TCSIMVTENEAVIDYALKKRDVKLVP 337 (384)
Q Consensus 312 TCSi~~~ENe~vv~~~l~~~~~~l~~ 337 (384)
.|.. +....+ .++...++.+..
T Consensus 74 ~~d~---~~~~~~-~~~~~~gf~~~~ 95 (260)
T 1g60_A 74 NTPF---NCAFIC-QYLVSKGMIFQN 95 (260)
T ss_dssp ECHH---HHHHHH-HHHHHTTCEEEE
T ss_pred cCcH---HHHHHH-HHHHhhccceeE
Confidence 6542 322222 344555665543
No 375
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=91.24 E-value=2.1 Score=39.19 Aligned_cols=79 Identities=11% Similarity=0.145 Sum_probs=56.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+...|..++.++..|..+.... . ..+
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 366787555 56778888776543 3358999999999999888888777766788888998874211 1 014
Q ss_pred CCCEEEEcC
Q 016730 249 TVDRVLLDA 257 (384)
Q Consensus 249 ~fD~VllDa 257 (384)
.+|.|+..+
T Consensus 106 ~iD~li~na 114 (286)
T 1xu9_A 106 GLDMLILNH 114 (286)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEECC
Confidence 799999873
No 376
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.14 E-value=2 Score=38.41 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=56.2
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.+..+++.+.+.+...+. .+.++..|..+..... ..+
T Consensus 8 ~~k~vlITG-as~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTG-SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 366777555 56777777777553 335899999999999999888877664 5677788988753211 014
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.++.+|-
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 377
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.99 E-value=0.16 Score=48.46 Aligned_cols=96 Identities=19% Similarity=0.133 Sum_probs=58.7
Q ss_pred cCCCCCceEEEeccC--CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCC
Q 016730 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cag--pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~ 247 (384)
..+++|++||=.||+ -|..+..++..++ .+|++++.++++++.+++ +|.+.+ +..+ .++. ....+
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~v--~~~~-~~~~~~v~~~~~~ 225 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADIV--LPLE-EGWAKAVREATGG 225 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSEE--EESS-TTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEE--ecCc-hhHHHHHHHHhCC
Confidence 357889999977762 2334445555443 489999999998876654 677643 2333 2221 11223
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
..+|+|+- |+|.. .+..+++.+ ++||+++..
T Consensus 226 ~g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 256 (342)
T 4eye_A 226 AGVDMVVD---PIGGP--------------------------AFDDAVRTL----ASEGRLLVV 256 (342)
T ss_dssp SCEEEEEE---SCC----------------------------CHHHHHHTE----EEEEEEEEC
T ss_pred CCceEEEE---CCchh--------------------------HHHHHHHhh----cCCCEEEEE
Confidence 47999875 33321 235677775 999998854
No 378
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.89 E-value=1.9 Score=39.49 Aligned_cols=82 Identities=10% Similarity=0.101 Sum_probs=58.3
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc-ccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~-~~~---~-----~~ 247 (384)
.+.+||=.| |.||.+.+++..+ .....|+.++.+..+++.+.+.+...+-.++.++..|..+. ... . ..
T Consensus 11 ~~k~vlITG-as~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTG-GNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 466677444 5577888877755 33458999999999998888888777666788888999875 211 0 01
Q ss_pred CCCCEEEEcCCCC
Q 016730 248 NTVDRVLLDAPCS 260 (384)
Q Consensus 248 ~~fD~VllDaPCS 260 (384)
+.+|.++.+|-..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999977543
No 379
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.89 E-value=2.2 Score=38.88 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=74.8
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCcccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~ 244 (384)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+ ..+++.+...+...|. ++.++..|..+....
T Consensus 9 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTG-GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 466777555 45667777777543 34589999987 8888888888877764 567778898875321
Q ss_pred ---c-----CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 245 ---L-----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 245 ---~-----~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
. ..+..|.++.+|-....+ .+ .+.++... ...-...+++.++..+ +.+|++|+.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~-----~~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLG-----AH----LPVQAFADAFDVDFVGVINTVHAALPYL----TSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCC-----TT----CCTHHHHHHHHHHTHHHHHHHHHHGGGC----CTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCccc-----Cc----CCHHHHHHHhhhhhhhhHHHHHHHHHHh----hcCcEEEEec
Confidence 1 114799999977543332 11 12222222 2222334555666654 7889998876
Q ss_pred c
Q 016730 313 C 313 (384)
Q Consensus 313 C 313 (384)
.
T Consensus 154 S 154 (287)
T 3pxx_A 154 S 154 (287)
T ss_dssp C
T ss_pred c
Confidence 4
No 380
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.82 E-value=0.51 Score=44.49 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=58.9
Q ss_pred cCCCCCceEEEeccC--CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCC
Q 016730 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cag--pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~ 247 (384)
..+++|++||=.|++ -|..+..++...+ .+|++++.++++++.++ .+|.+.+ +..+..++. ....+
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAK----ALGAWET--IDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCCEE--EeCCCccHHHHHHHHhCC
Confidence 357899999977632 2333344444443 48999999999988775 4676533 233222221 11223
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
..+|.|+- |+|.. .+..+++.+ ++||+++...
T Consensus 208 ~g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYD---GVGQD--------------------------TWLTSLDSV----APRGLVVSFG 239 (325)
T ss_dssp CCEEEEEE---SSCGG--------------------------GHHHHHTTE----EEEEEEEECC
T ss_pred CCceEEEE---CCChH--------------------------HHHHHHHHh----cCCCEEEEEe
Confidence 57998875 33321 345677775 9999988643
No 381
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.79 E-value=1.9 Score=39.13 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++.+.++++.+.+.++..+-.++.++..|..+..... ..+
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 466777555 55777887777553 33589999999999999888888777556888889998753211 114
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
..|.++.+|-
T Consensus 88 ~id~lvnnAg 97 (262)
T 3pk0_A 88 GIDVVCANAG 97 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 382
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.73 E-value=4.6 Score=35.82 Aligned_cols=79 Identities=8% Similarity=0.083 Sum_probs=56.3
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~~ 249 (384)
|.+||=.| |+||.+.+++..+. ....|+.++.++.+++.+.+.++..|. .+.++..|..+..... ..+.
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 55677555 56777777776553 345899999999999999888888775 4677788988753210 1257
Q ss_pred CCEEEEcCCC
Q 016730 250 VDRVLLDAPC 259 (384)
Q Consensus 250 fD~VllDaPC 259 (384)
+|.++..|--
T Consensus 83 id~li~~Ag~ 92 (247)
T 3lyl_A 83 IDILVNNAGI 92 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987743
No 383
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=90.64 E-value=2.7 Score=37.69 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=54.3
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~~ 249 (384)
|.+||=.| |+||.+.+++..+- ....|+.++.++.+++.+.+.+...|. ++.++..|..+.... . ..+.
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56677555 55777887777553 335899999999999888887776664 467778898874321 0 0147
Q ss_pred CCEEEEcCC
Q 016730 250 VDRVLLDAP 258 (384)
Q Consensus 250 fD~VllDaP 258 (384)
+|.++.++-
T Consensus 85 id~lv~nAg 93 (247)
T 2jah_A 85 LDILVNNAG 93 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999998764
No 384
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.56 E-value=2.3 Score=38.43 Aligned_cols=124 Identities=14% Similarity=0.176 Sum_probs=74.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..+++.+.+.+...|. ++.++..|..+.... . ..+
T Consensus 11 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTG-AAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECS-CSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 366777555 55667777776543 335899999999999999888888774 467778898875321 0 114
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
..|.++.+|--+..+.+ ..+.++.... ..-...+++.++..+.. +.+|++|+.+.
T Consensus 89 ~id~lv~nAg~~~~~~~--------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS 147 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPF--------DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK--AGGGAILNISS 147 (256)
T ss_dssp CCCEEEECCCCCCCCCT--------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECC
T ss_pred CCCEEEECCCCCCCCCC--------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcC
Confidence 79999987753332222 2233333222 12223345555544311 35688887654
No 385
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.55 E-value=0.3 Score=47.07 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=59.3
Q ss_pred CCCCCceEEEecc-C-CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cCCCC
Q 016730 175 APQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNT 249 (384)
Q Consensus 175 ~~~~g~~VLD~ca-g-pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~~~~ 249 (384)
++++|++||-.|| | .|..+..++...+ .+|++++.++++++.+++ +|.+.+ +..+..++... .....
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~~~--~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGCDRP--INYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCSEE--EETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCCcEE--EecCChhHHHHHHHhcCCC
Confidence 5789999998883 3 3444445555542 489999999998877653 787643 23322222111 11246
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
+|.|+- |+|. ..+..+++.+ ++||+++...
T Consensus 232 ~D~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~g 261 (362)
T 2c0c_A 232 VDVVYE---SVGG--------------------------AMFDLAVDAL----ATKGRLIVIG 261 (362)
T ss_dssp EEEEEE---CSCT--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CCEEEE---CCCH--------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 999875 3221 1345677775 9999988643
No 386
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.49 E-value=0.37 Score=48.00 Aligned_cols=52 Identities=13% Similarity=0.043 Sum_probs=35.3
Q ss_pred cCCCCCceEEEecc-CC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceE
Q 016730 174 LAPQEKERVIDMAA-AP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (384)
Q Consensus 174 L~~~~g~~VLD~ca-gp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v 231 (384)
.++++|++||=.|| |+ |..+..++..++ .+|++++.++++++.++ ++|.+.+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~----~lGa~~v 277 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICR----AMGAEAI 277 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHH----hhCCcEE
Confidence 45789999997775 22 334445555443 47899999999988774 4787643
No 387
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=90.49 E-value=5.2 Score=36.16 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=54.4
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHc-CCceEEEEecCCCCc----cccc------
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRM-GVTNTIVCNYDGNEL----PKVL------ 245 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~-g~~~v~~~~~D~~~~----~~~~------ 245 (384)
|.+|| +.-|.||.+.+++..+. ....|+.++. ++.+++.+.+.+... | .++.++..|..+. ....
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 55677 45566788888887553 3358999999 998888887777655 5 3567778898876 2210
Q ss_pred --CCCCCCEEEEcCCC
Q 016730 246 --GLNTVDRVLLDAPC 259 (384)
Q Consensus 246 --~~~~fD~VllDaPC 259 (384)
..+.+|.++..+-.
T Consensus 89 ~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 01378999997754
No 388
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.42 E-value=2.7 Score=39.07 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=57.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.|++ ||.+.+++..+. ....|+.++.+..+++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 57778866655 677777777543 345899999999999999888887765 4677788988753211 014
Q ss_pred CCCEEEEcCCCC
Q 016730 249 TVDRVLLDAPCS 260 (384)
Q Consensus 249 ~fD~VllDaPCS 260 (384)
.+|.++.+|--.
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 799999977543
No 389
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=90.35 E-value=4.3 Score=37.04 Aligned_cols=80 Identities=11% Similarity=0.028 Sum_probs=56.9
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCccccc--------C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVL--------G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~--~v~~~~~D~~~~~~~~--------~ 246 (384)
.|.+||=.| |.||.+.+++..+ .....|+.+|.++..++.+.+.++..+.. .+.++..|..+..... .
T Consensus 10 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTG-GGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 366777555 5567777777754 33458999999999999988888877653 5778889988753210 0
Q ss_pred CCCCCEEEEcCC
Q 016730 247 LNTVDRVLLDAP 258 (384)
Q Consensus 247 ~~~fD~VllDaP 258 (384)
.+.+|.++.+|-
T Consensus 89 ~g~id~lv~nAg 100 (281)
T 3svt_A 89 HGRLHGVVHCAG 100 (281)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998764
No 390
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.34 E-value=3.1 Score=37.69 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=55.5
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.|++ ||.+.+++..+ .....|+.++.+.++++.+.+.+...|. ++.++..|..+.... . ..+
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVG-PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCC-TTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCC-cHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46777766654 55677766654 3345899999999999999888887764 467778898875321 0 125
Q ss_pred CCCEEEEcC
Q 016730 249 TVDRVLLDA 257 (384)
Q Consensus 249 ~fD~VllDa 257 (384)
..|.++.++
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 799999876
No 391
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.27 E-value=0.58 Score=43.97 Aligned_cols=95 Identities=14% Similarity=0.178 Sum_probs=55.7
Q ss_pred CCCCc-eEEEecc--CCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCE
Q 016730 176 PQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (384)
Q Consensus 176 ~~~g~-~VLD~ca--gpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~ 252 (384)
+++++ +||=.|| +-|..+..++..++ .+|++++.++++++.+++ +|.+.+.- ..+.... .......+|.
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~vi~-~~~~~~~-~~~~~~~~d~ 214 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANRILS-RDEFAES-RPLEKQLWAG 214 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSEEEE-GGGSSCC-CSSCCCCEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEEEe-cCCHHHH-HhhcCCCccE
Confidence 44432 4776654 22444455555543 489999999999887754 78765332 1221111 1122357898
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|+ |+ +|. ..+..+++.+ ++||+++..
T Consensus 215 v~-d~--~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 240 (324)
T 3nx4_A 215 AI-DT--VGD--------------------------KVLAKVLAQM----NYGGCVAAC 240 (324)
T ss_dssp EE-ES--SCH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred EE-EC--CCc--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 75 43 221 1457788886 999999864
No 392
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.15 E-value=0.57 Score=46.30 Aligned_cols=53 Identities=21% Similarity=0.276 Sum_probs=35.1
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceE
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNT 231 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v 231 (384)
..+++|++||=.|| +|+.+..++++... ..+|++++.++++++.++ ++|.+.+
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~ 269 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCDLV 269 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCCCE
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEE
Confidence 45789999997765 34444444433322 248899999999988764 5787643
No 393
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.08 E-value=0.6 Score=44.44 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=58.1
Q ss_pred CCCCCceEEEeccCC--ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc----ccccCCC
Q 016730 175 APQEKERVIDMAAAP--GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL----PKVLGLN 248 (384)
Q Consensus 175 ~~~~g~~VLD~cagp--Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~----~~~~~~~ 248 (384)
.+++|++||-.|+|. |..+..++.... ..+|+++|.++++++.++ .+|.+.+ +.....+. ......+
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAK----RAGADYV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCCEE--ecCCCccHHHHHHHHhcCC
Confidence 578999999999862 333334444431 258999999999987764 3576533 22221121 1111114
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+|.|+-.+ |.. ..+..+++.+ ++||+++..
T Consensus 240 ~~d~vi~~~---g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (347)
T 1jvb_A 240 GVDAVIDLN---NSE-------------------------KTLSVYPKAL----AKQGKYVMV 270 (347)
T ss_dssp CEEEEEESC---CCH-------------------------HHHTTGGGGE----EEEEEEEEC
T ss_pred CceEEEECC---CCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 799987632 221 2356667775 999998764
No 394
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.02 E-value=2.2 Score=38.61 Aligned_cols=120 Identities=13% Similarity=0.154 Sum_probs=72.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.++++++.+.+.+ | .++.++..|..+..... ..+
T Consensus 7 ~gk~~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIG-GTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 466777666 45667777777543 3458999999998887776654 3 35777788988753211 114
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+|.++.++-.+..+-+ ...+.++..... .-...+++.+...+ +.+|++|+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS 139 (255)
T 4eso_A 82 AIDLLHINAGVSELEPF-------DQVSEASYDRQFAVNTKGAFFTVQRLTPLI----REGGSIVFTSS 139 (255)
T ss_dssp SEEEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEECC
T ss_pred CCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHH----hcCCEEEEECC
Confidence 78999987654332221 122333333222 22233455555554 77899887654
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.96 E-value=1.1 Score=42.14 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=54.7
Q ss_pred cCCCCCceEEEec-cCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-cccccCCCCC
Q 016730 174 LAPQEKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LPKVLGLNTV 250 (384)
Q Consensus 174 L~~~~g~~VLD~c-agp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~-~~~~~~~~~f 250 (384)
..+++|++||=.| +|+ |..+..++..++ .+|++++ +.++++. ++++|.+.+ +..+..+ +.... ..|
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~----~~~lGa~~~--i~~~~~~~~~~~~--~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAF----LKALGAEQC--INYHEEDFLLAIS--TPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHH----HHHHTCSEE--EETTTSCHHHHCC--SCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHH----HHHcCCCEE--EeCCCcchhhhhc--cCC
Confidence 4678999999664 332 334445555543 4788887 5555444 456888743 3333222 22222 579
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|+|+- |+|. ..+..+++.+ ++||+++..
T Consensus 217 D~v~d---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVID---LVGG--------------------------DVGIQSIDCL----KETGCIVSV 244 (321)
T ss_dssp EEEEE---SSCH--------------------------HHHHHHGGGE----EEEEEEEEC
T ss_pred CEEEE---CCCc--------------------------HHHHHHHHhc----cCCCEEEEe
Confidence 98864 3221 1225677776 999998853
No 396
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=89.92 E-value=0.4 Score=45.25 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=55.6
Q ss_pred CCCCCc-eEEEecc-C-CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCcccccCCCCC
Q 016730 175 APQEKE-RVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTV 250 (384)
Q Consensus 175 ~~~~g~-~VLD~ca-g-pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~-~~~~~~~~~~~f 250 (384)
++++|+ +||=.|| | -|..+..++..++ .+|++++.++++++.++ .+|.+.+.-. .+. ...........+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~~i~~-~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKEVLAR-EDVMAERIRPLDKQRW 217 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSEEEEC-C---------CCSCCE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcEEEec-CCcHHHHHHHhcCCcc
Confidence 467886 8998876 2 2334445555543 47999999988887764 4787643211 111 111111122468
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|.|+- |+|.. .+..+++.+ ++||+++..
T Consensus 218 d~vid---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~ 245 (328)
T 1xa0_A 218 AAAVD---PVGGR--------------------------TLATVLSRM----RYGGAVAVS 245 (328)
T ss_dssp EEEEE---CSTTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred cEEEE---CCcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 98864 33211 145677775 999998753
No 397
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.88 E-value=2.8 Score=38.88 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=74.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCcccc---c-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~--~v~~~~~D~~~~~~~---~-----~ 246 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+...|.. ++.++..|..+.... . .
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 356677444 56777888777553 3458999999999998888777766642 577778898875321 1 0
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+.+|.++.++.....+ |......+.++.... ..-...+++.+...+ .+.+|++|+.+.
T Consensus 104 ~g~iD~lvnnAG~~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~---~~~~g~IV~isS 166 (297)
T 1xhl_A 104 FGKIDILVNNAGANLAD-----GTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHL---IKTKGEIVNVSS 166 (297)
T ss_dssp HSCCCEEEECCCCCCCC-----SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH---HHTTCEEEEECC
T ss_pred cCCCCEEEECCCcCcCC-----CCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHH---HhcCCEEEEEcC
Confidence 14789999877432221 110112233333222 122233455555544 234588887654
No 398
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.77 E-value=3.3 Score=37.94 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=56.8
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc--------cCCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--------LGLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~--------~~~~ 248 (384)
.|..+|=.|++ +|.+..++..+ .....|+.+|.++++++.+.+.+...|. ++..+..|.++.... ...+
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 47777766655 55677776654 3446899999999999999999988886 466678898874221 1236
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
+.|.++.+|-
T Consensus 86 ~iDiLVNNAG 95 (255)
T 4g81_D 86 HVDILINNAG 95 (255)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 8999988773
No 399
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.69 E-value=3 Score=38.12 Aligned_cols=126 Identities=14% Similarity=0.098 Sum_probs=73.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-------------CHHHHHHHHHHHHHcCCceEEEEecCCCCccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-------------~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~ 243 (384)
.|.+||=.|+ .||.+.+++..+- ....|+.+|. ++++++.+.+.+...|. ++.++..|..+...
T Consensus 14 ~gk~~lVTGa-s~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGA-ARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHH
Confidence 4667775555 5667777776543 3458999998 78888888888877764 46677889887532
Q ss_pred cc--------CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 244 VL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 244 ~~--------~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.. ..+..|.++.+|--...+-+ ...+.++.... ..-...+++.++..+.. -+.+|++|+.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~~~~g~iv~i 163 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRV-------WELTDEQWDTVIGVNLTGTWRTLRATVPAMIE-AGNGGSIVVV 163 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCSCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-cCCCCEEEEE
Confidence 10 11479999987643322211 12233333321 12223345555554310 0237888876
Q ss_pred ec
Q 016730 312 TC 313 (384)
Q Consensus 312 TC 313 (384)
+.
T Consensus 164 sS 165 (280)
T 3pgx_A 164 SS 165 (280)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 400
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.62 E-value=7.1 Score=35.33 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=56.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.++..|. ++.++..|..+.... . ..+
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 356777555 56778888877553 345899999999999888888877664 577778898874321 0 114
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.|+..+..
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999987643
No 401
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=89.50 E-value=2.9 Score=38.24 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=54.8
Q ss_pred CCceEEEeccCCChHHHHHHHHccCC-ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |+||.+.+++..+... ..|++++.++.+++.+.+.++..|. ++.++..|..+..... ..+
T Consensus 43 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 356777555 5688888888766443 4788899999888887777766554 4667788988753211 114
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.|+..|--
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 402
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.49 E-value=0.27 Score=47.35 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=55.1
Q ss_pred CceEEEeccCCChHHHHHHHHccC-CceEEEEeCCH---HHHHHHHHHHHHcCCceEEEEecCCCCccccc--CCCCCCE
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKA---SRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDR 252 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~---~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--~~~~fD~ 252 (384)
|++||-.|+ |+.+..+++++.. ..+|+++|.++ ++++.++ .+|.+.+ ..+ ++.... ....+|+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~----~~ga~~v---~~~--~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE----ETKTNYY---NSS--NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH----HHTCEEE---ECT--TCSHHHHHHHCCEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH----HhCCcee---chH--HHHHHHHHhCCCCCE
Confidence 999999987 6655554444322 24899999988 7776554 4677543 222 221111 0146999
Q ss_pred EEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHH-HHHHHchhccCCCCcEEEEEe
Q 016730 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI-LAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 253 VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL-~~a~~~L~~~lkpGG~lvYsT 312 (384)
|+- |+|... .+ ..+++.+ ++||++|...
T Consensus 250 vid---~~g~~~-------------------------~~~~~~~~~l----~~~G~iv~~g 278 (366)
T 2cdc_A 250 IID---ATGADV-------------------------NILGNVIPLL----GRNGVLGLFG 278 (366)
T ss_dssp EEE---CCCCCT-------------------------HHHHHHGGGE----EEEEEEEECS
T ss_pred EEE---CCCChH-------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 876 333210 23 6677775 9999988643
No 403
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.47 E-value=0.9 Score=41.08 Aligned_cols=128 Identities=13% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCCceEEEeccC-CChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------C
Q 016730 177 QEKERVIDMAAA-PGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------G 246 (384)
Q Consensus 177 ~~g~~VLD~cag-pGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~ 246 (384)
.++.+||=.|++ +||.+.+++..+. ....|+.++.+....+.+++..+..+ .+.++..|..+..... .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 357788878874 4777887777553 34589999988665666666555555 3667788988753210 1
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhcc-CCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTS-KSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~-~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+..|.++..|--...+.+.. + .+. .+.++..... .-...+++.+...+ +++|++|+.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~-~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~g~iv~isS 154 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAG-D--FLDGLTRENFRIAHDISAYSFPALAKAALPML----SDDASLLTLSY 154 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSS-C--TTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE----EEEEEEEEEEC
T ss_pred cCCCCEEEECCccCccccccC-c--cccccCHHHHHHHHhhhHHHHHHHHHHHHHHh----ccCceEEEEec
Confidence 147899998764322110000 0 111 2344443322 22334555666654 67888887654
No 404
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.42 E-value=3 Score=37.90 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=55.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHH-cCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r-~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+- ....|+.++.+..+++.+.+.+.. .|. .+.++..|..+..... ..
T Consensus 19 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITG-ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466777555 55677777777553 345899999999999888877765 453 5777788988753211 11
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+..|.++.+|--
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 479999998753
No 405
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.40 E-value=3.4 Score=36.67 Aligned_cols=128 Identities=12% Similarity=0.127 Sum_probs=74.8
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCcccc---c-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~~~---~-----~ 246 (384)
.|.+||=.| |+||.+.+++..+. ....|+.++.++.+++.+.+.++..+..++.++..|. .+.... . .
T Consensus 13 ~~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTG-AARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 466777555 55777888777553 3458999999999999999999888766666666666 432110 0 1
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+.+|.++..|-..+.. .| ....+.++... ...-...+++.++..+. -..+|++|+.+.+
T Consensus 92 ~g~id~lv~nAg~~~~~----~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~~~iv~isS~ 155 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPR----TP--LEQLPDEDFMQVMHVNVNATFMLTRALLPLLK--RSEDASIAFTSSS 155 (247)
T ss_dssp HSCCSEEEECCCCCCCC----SC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHT--TSSSEEEEEECCG
T ss_pred CCCCCEEEECCccCCCC----CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH--hCCCCeEEEEcch
Confidence 14799999977532211 01 11123333322 22223345555555541 1346788876543
No 406
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.37 E-value=0.25 Score=47.22 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=57.8
Q ss_pred CCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEec-CCCCccc----ccCCC
Q 016730 175 APQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPK----VLGLN 248 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~-D~~~~~~----~~~~~ 248 (384)
++++|++||-.|++ |+.+..+++++. ...+|+++|.++++++.++ .+|...+ +.. |..++.. ...+
T Consensus 166 ~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~- 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAA-GGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR----SIGGEVF--IDFTKEKDIVGAVLKATDG- 237 (347)
T ss_dssp TCCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH----HTTCCEE--EETTTCSCHHHHHHHHHTS-
T ss_pred CCCCCCEEEEECCC-chHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH----HcCCceE--EecCccHhHHHHHHHHhCC-
Confidence 57889999999973 333443333332 1248999999988886654 4676532 221 1122211 1122
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.+|.|+-.+ |. ...+..+++.+ ++||+++...
T Consensus 238 ~~D~vi~~~---g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINVS---VS-------------------------EAAIEASTRYV----RANGTTVLVG 269 (347)
T ss_dssp CEEEEEECS---SC-------------------------HHHHHHHTTSE----EEEEEEEECC
T ss_pred CCCEEEECC---Cc-------------------------HHHHHHHHHHH----hcCCEEEEEe
Confidence 699987633 21 12456777876 9999988643
No 407
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.35 E-value=6.3 Score=35.30 Aligned_cols=80 Identities=11% Similarity=0.064 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC--CCcccc---c-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~--~~~~~~---~-----~ 246 (384)
.|.+||=.| |.||.+.+++..+ .....|+.+|.+..+++.+.+.+...+-..+.++..|. .+.... . .
T Consensus 11 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTG-ASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 466777555 5567777777654 33458999999999999888888766554566777887 443211 0 1
Q ss_pred CCCCCEEEEcCC
Q 016730 247 LNTVDRVLLDAP 258 (384)
Q Consensus 247 ~~~fD~VllDaP 258 (384)
.+..|.++.+|-
T Consensus 90 ~g~id~lv~nAg 101 (252)
T 3f1l_A 90 YPRLDGVLHNAG 101 (252)
T ss_dssp CSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 257999998764
No 408
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=89.31 E-value=2.1 Score=38.61 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=56.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc-------CCCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------GLNT 249 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~-------~~~~ 249 (384)
.|.+||=.|+ +||.+.+++..+. ....|+.+|.++.+++.+.+.+...|. ++.++..|..+..... ..+.
T Consensus 6 ~~k~vlVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGA-GDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECC-SSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 3566775554 5667777776553 345899999999999999988888764 5777889988753211 0047
Q ss_pred CCEEEEcCCCC
Q 016730 250 VDRVLLDAPCS 260 (384)
Q Consensus 250 fD~VllDaPCS 260 (384)
.|.++.+|-..
T Consensus 84 id~lv~nAg~~ 94 (252)
T 3h7a_A 84 LEVTIFNVGAN 94 (252)
T ss_dssp EEEEEECCCCC
T ss_pred ceEEEECCCcC
Confidence 89999877543
No 409
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.30 E-value=4 Score=36.77 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=56.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++.+..+++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 466777555 56777888777553 345899999999999999888887764 5777788988753211 114
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
..|.|+..+-
T Consensus 106 ~id~lv~~Ag 115 (262)
T 3rkr_A 106 RCDVLVNNAG 115 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 410
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.26 E-value=5.4 Score=36.32 Aligned_cols=124 Identities=13% Similarity=0.169 Sum_probs=74.2
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.|+ .||.+.+++..+- ....|+.++. +..+++.+.+.++..|. .+.++..|..+.... . ..
T Consensus 30 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGG-SRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4667776665 4667777776553 3347777754 56788888888887775 466778898875321 0 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
+..|.++.+|-....+.+ ...+.++..... .-...+++.+...+ +.+|.+|+.+.+
T Consensus 108 g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m----~~~g~iv~isS~ 167 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPL-------EETTVADFDEVMAVNFRAPFVAIRSASRHL----GDGGRIITIGSN 167 (271)
T ss_dssp SCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCG
T ss_pred CCCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCEEEEEeCh
Confidence 479999987743322211 122333333222 22234556666654 788999887654
No 411
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.21 E-value=0.28 Score=47.08 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=42.5
Q ss_pred CCC-CCceEEEeccCCChHHH---HHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CcccccCCCC
Q 016730 175 APQ-EKERVIDMAAAPGGKTT---YIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNT 249 (384)
Q Consensus 175 ~~~-~g~~VLD~cagpGgkt~---~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~-~~~~~~~~~~ 249 (384)
.++ +|++||=.|+ |+.+. .++..++ .+|+++|.++++++.++ +++|.+.+. ..+-. .+.... ..
T Consensus 176 ~~~~~g~~VlV~Ga--G~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~vi--~~~~~~~~~~~~--~g 244 (357)
T 2cf5_A 176 GLKQPGLRGGILGL--GGVGHMGVKIAKAMG--HHVTVISSSNKKREEAL---QDLGADDYV--IGSDQAKMSELA--DS 244 (357)
T ss_dssp STTSTTCEEEEECC--SHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHH---TTSCCSCEE--ETTCHHHHHHST--TT
T ss_pred CCCCCCCEEEEECC--CHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHH---HHcCCceee--ccccHHHHHHhc--CC
Confidence 566 9999999875 55444 4444443 48999999998877654 257876432 22111 111111 46
Q ss_pred CCEEEE
Q 016730 250 VDRVLL 255 (384)
Q Consensus 250 fD~Vll 255 (384)
||.|+-
T Consensus 245 ~D~vid 250 (357)
T 2cf5_A 245 LDYVID 250 (357)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 999874
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.19 E-value=4.2 Score=38.14 Aligned_cols=80 Identities=9% Similarity=0.052 Sum_probs=57.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCc-eEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~-~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.|+ +||.+.+++..+- ....|++++.+..+++.+.+.+...|.. ++.++..|..+..... ..
T Consensus 7 ~~k~vlVTGa-s~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGG-ANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETT-TSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCC-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4667776665 4667887777553 3458999999999999998888776652 5778889988753210 11
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.++.+|-
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998774
No 413
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.14 E-value=1.1 Score=42.30 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=57.7
Q ss_pred CCCCCceEEEeccCCChHHH---HHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCC
Q 016730 175 APQEKERVIDMAAAPGGKTT---YIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (384)
Q Consensus 175 ~~~~g~~VLD~cagpGgkt~---~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~ 247 (384)
.+++|++||=.|| .|+.+. .++...+ .+|++++.++++++.++ ++|.+.+ +..+..++. ....+
T Consensus 145 ~~~~g~~vlV~Ga-~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAA-AGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAK----EYGAEYL--INASKEDILRQVLKFTNG 215 (334)
T ss_dssp CCCTTCEEEESST-TBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred cCCCCCEEEEECC-CCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEE--EeCCCchHHHHHHHHhCC
Confidence 5789999998874 233333 4444432 48999999999988664 4676533 222222221 11123
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
..||.|+- |+|.. .+..+++.+ ++||++|..
T Consensus 216 ~g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 246 (334)
T 3qwb_A 216 KGVDASFD---SVGKD--------------------------TFEISLAAL----KRKGVFVSF 246 (334)
T ss_dssp SCEEEEEE---CCGGG--------------------------GHHHHHHHE----EEEEEEEEC
T ss_pred CCceEEEE---CCChH--------------------------HHHHHHHHh----ccCCEEEEE
Confidence 57998875 32211 245667775 999998864
No 414
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.08 E-value=4.6 Score=36.61 Aligned_cols=125 Identities=13% Similarity=0.203 Sum_probs=74.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++. +.+.++.+.+.++..|. ++.++..|..+..... ..
T Consensus 17 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTG-SGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESC-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 466777555 45667777776553 3347777665 57778888888887775 4667788988753210 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEeccC
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi 315 (384)
+..|.++.+|--...+-+ ...+.++.... ..-...+++.++..+ +++|++|+.+.+.
T Consensus 95 g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHL-------KDVTEEEFDRVFSLNTRGQFFVAREAYRHL----TEGGRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCeEEEEeCch
Confidence 478999886643322211 12233333322 222334556666664 7789998876543
No 415
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=89.05 E-value=6 Score=36.45 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=55.0
Q ss_pred CCceEEEeccCCChHHHHHHHHccCCc----eEEEEeCCHHHHHHHHHHHHHcC-CceEEEEecCCCCccccc-------
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNTG----LIYANEMKASRLKSLTANLHRMG-VTNTIVCNYDGNELPKVL------- 245 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~g----~V~a~D~~~~rl~~l~~n~~r~g-~~~v~~~~~D~~~~~~~~------- 245 (384)
.|.+||=.| |.||.+..++..+-..| .|+.++.+.++++.+.+.+...+ -..+.++..|..+.....
T Consensus 32 ~~k~~lVTG-as~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITG-ASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEec-CCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 466777666 45677777776552222 89999999999998888876652 235777788988753210
Q ss_pred -CCCCCCEEEEcCC
Q 016730 246 -GLNTVDRVLLDAP 258 (384)
Q Consensus 246 -~~~~fD~VllDaP 258 (384)
..+..|.++.+|-
T Consensus 111 ~~~g~iD~lVnnAG 124 (287)
T 3rku_A 111 QEFKDIDILVNNAG 124 (287)
T ss_dssp GGGCSCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1147999998764
No 416
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=88.83 E-value=4.6 Score=35.89 Aligned_cols=120 Identities=15% Similarity=0.061 Sum_probs=68.7
Q ss_pred CceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~~ 249 (384)
+.+||=.| |+||.+.+++..+ .....|+.++.+.++++.+.+.+ +. .+.++..|..+..... ..+.
T Consensus 3 ~k~vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTG-AGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GN-AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 44566455 5567777777654 33458999999999888877665 22 4777788988743210 1147
Q ss_pred CCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 250 fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.|.++.+|--+..+-+ ...+.++... ...-...+++.++..+ .+.+|++|+.+.
T Consensus 78 id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS 135 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPV-------GVYTAEQIRRVMESNLVSTILVAQQTVRLI---GERGGVLANVLS 135 (235)
T ss_dssp CSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEECC
T ss_pred CcEEEECCCCCCCCCh-------HhCCHHHHHHHHHHHhHHHHHHHHHHHHHH---HHcCCEEEEEeC
Confidence 8999987753222211 1123333322 2222334555666654 356777776543
No 417
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.78 E-value=3.6 Score=36.20 Aligned_cols=79 Identities=19% Similarity=0.188 Sum_probs=53.6
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHH-HcCCceEEEEecCCCCcccc---cC-----CC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLH-RMGVTNTIVCNYDGNELPKV---LG-----LN 248 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~-r~g~~~v~~~~~D~~~~~~~---~~-----~~ 248 (384)
+.+||=.| |.||.+.+++..+. ....|+.++.+.++++.+.+.+. ..|. .+.++..|..+.... .. .+
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 44566444 56777888777653 33589999999999988887775 4453 577778898875321 11 13
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.++..|--
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78999987643
No 418
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.72 E-value=2.7 Score=38.35 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=55.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCc--eEEEEecCCCCcccc---c-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~--~v~~~~~D~~~~~~~---~-----~ 246 (384)
.|.+||=.| |.||.+.+++..+. ....|++++.++.+++.+.+.+...|.. ++.++..|..+.... . .
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 355676555 56777777777543 3358999999999988887777665542 577778898875321 1 0
Q ss_pred CCCCCEEEEcCCC
Q 016730 247 LNTVDRVLLDAPC 259 (384)
Q Consensus 247 ~~~fD~VllDaPC 259 (384)
.+.+|.++.+|-.
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999987753
No 419
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=88.67 E-value=2.7 Score=37.18 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=52.6
Q ss_pred CceEEEeccCCChHHHHHHHHccCC-c-------eEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c--
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNT-G-------LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-- 245 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~-g-------~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-- 245 (384)
+.+|| +..|+||.+.+++..+-.. . .|++++.++.+++.+.+.+...+. ++.++..|..+.... .
T Consensus 2 ~k~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC-eeeEEEecCCCHHHHHHHHHH
Confidence 34566 4446788888877755322 3 799999999988888777765443 577778898874321 1
Q ss_pred ---CCCCCCEEEEcCC
Q 016730 246 ---GLNTVDRVLLDAP 258 (384)
Q Consensus 246 ---~~~~fD~VllDaP 258 (384)
..+.+|.|+..+-
T Consensus 80 ~~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHhCCCCCEEEEcCC
Confidence 1147999998664
No 420
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.61 E-value=0.38 Score=45.80 Aligned_cols=99 Identities=18% Similarity=0.168 Sum_probs=57.2
Q ss_pred hcCCCCCceEEEeccCC-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc---CCC
Q 016730 173 ALAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLN 248 (384)
Q Consensus 173 ~L~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~---~~~ 248 (384)
..++ +|++||-.|+|+ |..+..++..++ ..+|+++|.++++++.+++ + .+. ++..+..++.... .+.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----l-a~~--v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP----Y-ADR--LVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT----T-CSE--EECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----h-HHh--ccCcCccCHHHHHHHhcCC
Confidence 3456 899999999833 223334444432 2379999999999877654 3 332 2232222221110 134
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.||.|+- |+|. ...+..+++.+ ++||+++...
T Consensus 231 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLE---FSGN-------------------------EAAIHQGLMAL----IPGGEARILG 262 (343)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEECC
T ss_pred CCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEEe
Confidence 7999975 2222 12356677776 9999988643
No 421
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.59 E-value=1.3 Score=42.37 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=58.3
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
.++++|++||-.||+ |+.+..+++++. ....|++++.++++++.+ +.+|...+ +..+-.++. ....+.
T Consensus 166 ~~~~~g~~vlV~Gas-ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 166 ACVKAGESVLVHGAS-GGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp SCCCTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE--EETTSTTHHHHHHHHHCTT
T ss_pred hCCCCcCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCCEE--EeCCCchHHHHHHHHcCCC
Confidence 357889999988863 444444444332 124899999999988755 45676532 222222211 111234
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEe
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsT 312 (384)
.+|.|+-.+. . ..+..+++.+ ++||+++...
T Consensus 239 ~~D~vi~~~G---~--------------------------~~~~~~~~~l----~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEMLA---N--------------------------VNLSKDLSLL----SHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESCH---H--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CcEEEEECCC---h--------------------------HHHHHHHHhc----cCCCEEEEEe
Confidence 7999875321 0 1245667775 9999988654
No 422
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=88.50 E-value=4.1 Score=35.95 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=52.9
Q ss_pred ceEEEeccCCChHHHHHHHHccC-CceEEE-EeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKN-TGLIYA-NEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~-~g~V~a-~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~~ 249 (384)
.+|| +..|+|+.+.+++..+-. ...|++ .+.++..++.+.+.++..+. ++.++..|..+.... . ..+.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3455 455678888888876533 347877 48898888888777776664 567778898875321 1 1147
Q ss_pred CCEEEEcCCC
Q 016730 250 VDRVLLDAPC 259 (384)
Q Consensus 250 fD~VllDaPC 259 (384)
+|.|+..+-.
T Consensus 80 id~li~~Ag~ 89 (244)
T 1edo_A 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 423
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.43 E-value=5.5 Score=35.77 Aligned_cols=79 Identities=10% Similarity=0.071 Sum_probs=54.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC-
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL- 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~- 247 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++++++.+.+.+...|. ++.++..|..+.... . ..
T Consensus 8 ~~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTG-GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 366777555 56777887776543 345899999999998887777766654 567778898875321 1 01
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.++..+-
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 424
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.41 E-value=7.3 Score=35.28 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=56.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+|+.+.+++..+. ....|++++.++.+++.+.+.+...|. ..+.++..|..+.... + ..
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 366677554 66778888877553 335899999999999888888877765 3577778898875321 1 01
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.|+..+.
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999998664
No 425
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.32 E-value=3.4 Score=37.71 Aligned_cols=80 Identities=14% Similarity=0.141 Sum_probs=56.8
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+ .....|+.+|.++.+++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 466777555 5677777777755 3345899999999999998888887774 4677788988753210 124
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
..|.++.+|-.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987743
No 426
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=88.30 E-value=4.1 Score=37.12 Aligned_cols=81 Identities=14% Similarity=0.198 Sum_probs=56.1
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+ .....|+.++.+..+++.+.+.+...|.. +.++..|..+.... . ..+
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 466777444 6677777777654 33458999999999999998888887754 55667888874321 0 114
Q ss_pred CCCEEEEcCCCC
Q 016730 249 TVDRVLLDAPCS 260 (384)
Q Consensus 249 ~fD~VllDaPCS 260 (384)
..|.++.+|--.
T Consensus 105 ~iD~lvnnAg~~ 116 (270)
T 3ftp_A 105 ALNVLVNNAGIT 116 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999877533
No 427
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=88.29 E-value=5.6 Score=36.41 Aligned_cols=80 Identities=11% Similarity=0.137 Sum_probs=54.5
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
|.+||=.| |.||.+.+++..+- ....|+.++. +...++.+.+.+....-..+.++..|..+..... ..+
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 56777555 55677777777553 3458999998 7788888877776654446778888988753210 124
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.++.+|--
T Consensus 104 ~iD~lv~nAg~ 114 (281)
T 3v2h_A 104 GADILVNNAGV 114 (281)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987754
No 428
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=88.16 E-value=4.8 Score=36.91 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=55.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.++.+++.+.+.+...+-..+.++..|..+..... ..+
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 55777888777553 34589999999999998888877666555677789988753210 114
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.++.+|-
T Consensus 111 ~iD~lvnnAG 120 (281)
T 4dry_A 111 RLDLLVNNAG 120 (281)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 429
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.12 E-value=8.3 Score=35.47 Aligned_cols=124 Identities=13% Similarity=0.124 Sum_probs=73.4
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC--HHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK--ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~--~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~ 246 (384)
.|.+||=.| |.||.+.+++..+- ....|+.++.+ ....+.+.+.++..|. ++.++..|..+.... . .
T Consensus 48 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTG-GDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 466777555 55777888877553 33578888886 4567777777777774 567778898874321 0 1
Q ss_pred CCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 247 ~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+..|.++.++--.. ..+.+ ...+.++.... ..-...+++.++..+ +.+|++|+.+.
T Consensus 126 ~g~iD~lv~nAg~~~-----~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~----~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQT-----AIPEI-KDLTSEQFQQTFAVNVFALFWITQEAIPLL----PKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCC-----CCSSG-GGCCHHHHHHHHHHHTHHHHHHHHHHGGGC----CTTCEEEEECC
T ss_pred cCCCCEEEECCCCcC-----CCCCc-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHh----hcCCEEEEECC
Confidence 147899998764221 11111 11233333222 222334566666654 77899988654
No 430
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=88.12 E-value=6.8 Score=35.79 Aligned_cols=80 Identities=13% Similarity=0.055 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~-g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.+..+++.+.+.+... +. ++.++..|..+.... . ..
T Consensus 25 ~~k~vlITG-asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITG-GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 356777555 56778888877553 3358999999999888777766554 43 577778898874311 0 12
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+.+|.|+..|-.
T Consensus 103 g~id~li~~Ag~ 114 (302)
T 1w6u_A 103 GHPNIVINNAAG 114 (302)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987653
No 431
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.10 E-value=0.24 Score=46.21 Aligned_cols=70 Identities=23% Similarity=0.256 Sum_probs=43.0
Q ss_pred CCCCceEEEecc-C-CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCC-CCcccccCCCCCCE
Q 016730 176 PQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTVDR 252 (384)
Q Consensus 176 ~~~g~~VLD~ca-g-pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~-~~~~~~~~~~~fD~ 252 (384)
+++|++||-.|+ | .|..+..++..++ .+|+++|.++++++.++ ++|.+.+ +..+. .++.... ..+|.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~~--~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEEA--ATYAEVPERAKAW--GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSEE--EEGGGHHHHHHHT--TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EECCcchhHHHHh--cCceE
Confidence 789999998886 2 2333444555443 48999999999887764 4787643 22211 1111112 46999
Q ss_pred EEE
Q 016730 253 VLL 255 (384)
Q Consensus 253 Vll 255 (384)
|+-
T Consensus 193 vid 195 (302)
T 1iz0_A 193 VLE 195 (302)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 432
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=88.07 E-value=5.5 Score=35.35 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=47.1
Q ss_pred CceEEEeccCCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCc------cccc-CCCCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL------PKVL-GLNTVD 251 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~------~~~~-~~~~fD 251 (384)
|.+||=.| |+||.+.+++..+...+.|++++.++.+++.+.+ ...+.++..|..+. .... ..+.+|
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 77 (245)
T 3e9n_A 5 KKIAVVTG-ATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD 77 (245)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred CCEEEEEc-CCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence 55666444 5677888888877666789999999988776654 23456666665432 1111 124789
Q ss_pred EEEEcCCC
Q 016730 252 RVLLDAPC 259 (384)
Q Consensus 252 ~VllDaPC 259 (384)
.++..|-.
T Consensus 78 ~lv~~Ag~ 85 (245)
T 3e9n_A 78 TLVHAAAV 85 (245)
T ss_dssp EEEECC--
T ss_pred EEEECCCc
Confidence 99987643
No 433
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.04 E-value=7.1 Score=37.76 Aligned_cols=80 Identities=9% Similarity=0.058 Sum_probs=56.9
Q ss_pred CceEEEeccCCChHHHHHHHHccCCc--eEEEEeCCHHHHHHHHHHHHHcCC---ceEEEEecCCCCccc---ccCCCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNTG--LIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPK---VLGLNTV 250 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~g--~V~a~D~~~~rl~~l~~n~~r~g~---~~v~~~~~D~~~~~~---~~~~~~f 250 (384)
+.+|| +..|+|+.+.+++..+-..| .|++++.++..+..+...+..... .++.++.+|..+... ......+
T Consensus 35 ~k~vL-VTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFL-VLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEE-EEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 66777 44567999999888765544 899999999998887777655421 468888899887531 1122579
Q ss_pred CEEEEcCCC
Q 016730 251 DRVLLDAPC 259 (384)
Q Consensus 251 D~VllDaPC 259 (384)
|.|+.-+..
T Consensus 114 D~Vih~Aa~ 122 (399)
T 3nzo_A 114 DYVLNLSAL 122 (399)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999986543
No 434
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.03 E-value=6 Score=36.03 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=54.8
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+...|. ++.++..|..+.... . ..+
T Consensus 21 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTG-ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356777555 55777887777553 335899999999998888777776664 466778898864321 0 114
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.++..+-
T Consensus 99 ~iD~lv~~Ag 108 (277)
T 2rhc_B 99 PVDVLVNNAG 108 (277)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 435
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.03 E-value=0.15 Score=48.69 Aligned_cols=65 Identities=15% Similarity=0.050 Sum_probs=39.8
Q ss_pred EEEE-ecCCCCcccccCCCCCCEEEEcCCCCCC-CcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEE
Q 016730 231 TIVC-NYDGNELPKVLGLNTVDRVLLDAPCSGT-GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (384)
Q Consensus 231 v~~~-~~D~~~~~~~~~~~~fD~VllDaPCSg~-G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~l 308 (384)
..++ ++|+......+..++||.|++|||.... +. |.. .......-...|..+.++| +|||.+
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~--------~~~----~~~~~~~~~~~l~~~~rvL----k~~G~i 102 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLAD--------WDD----HMDYIGWAKRWLAEAERVL----SPTGSI 102 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGG--------GGT----CSSHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCC--------ccC----HHHHHHHHHHHHHHHHHHc----CCCeEE
Confidence 4566 8998765444455789999999998332 11 110 0111222345566666765 999998
Q ss_pred EEE
Q 016730 309 VYS 311 (384)
Q Consensus 309 vYs 311 (384)
+..
T Consensus 103 ~i~ 105 (319)
T 1eg2_A 103 AIF 105 (319)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 436
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.01 E-value=3.1 Score=36.63 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=47.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceE-EEEecCCC-CcccccCCCCCCEEE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGN-ELPKVLGLNTVDRVL 254 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v-~~~~~D~~-~~~~~~~~~~fD~Vl 254 (384)
.|.+|| +..|+|+.+.+++..+-. ...|++++.++.++..+.. . ++ .++.+|.. .+...+ ..+|.|+
T Consensus 20 ~~~~il-VtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~~~~~~~~--~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVL-VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLEEDFSHAF--ASIDAVV 89 (236)
T ss_dssp -CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTTSCCGGGG--TTCSEEE
T ss_pred CCCeEE-EECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccHHHHHHHH--cCCCEEE
Confidence 467787 445678888888876533 3589999999888765543 2 34 66678876 223333 5799999
Q ss_pred EcCC
Q 016730 255 LDAP 258 (384)
Q Consensus 255 lDaP 258 (384)
..+.
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8665
No 437
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=88.01 E-value=2.2 Score=37.91 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=54.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC-HHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK-ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~-~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+|| +.-|+|+.+.+++..+. ....|++++.+ +.+++.+.+.+...+. ++.++..|..+.... . ..
T Consensus 6 ~~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 366777 44566888888887553 33589999998 7778777777766553 577778898875321 1 01
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.|+..+.
T Consensus 84 g~id~vi~~Ag 94 (258)
T 3afn_B 84 GGIDVLINNAG 94 (258)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999998764
No 438
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.00 E-value=4.4 Score=35.62 Aligned_cols=117 Identities=16% Similarity=0.106 Sum_probs=65.6
Q ss_pred EEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c--CCCCCCEEEE
Q 016730 182 VIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L--GLNTVDRVLL 255 (384)
Q Consensus 182 VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~--~~~~fD~Vll 255 (384)
||=.| |+||.+.+++..+. ....|+.++.++.+++.+.+.+ + .++.++..|..+.... . -...+|.++.
T Consensus 4 vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 4 IVITG-ASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S-NNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S-SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h-hccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 44344 55777887777553 3358999999998887665543 3 3456667888764221 1 1145699988
Q ss_pred cCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 256 DAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 256 DaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+.-+..+-+ ...+.++... ...-...+++.++..+ .+.+|.+|+.+.
T Consensus 79 ~Ag~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS 130 (230)
T 3guy_A 79 SAGSGYFGLL-------QEQDPEQIQTLIENNLSSAINVLRELVKRY---KDQPVNVVMIMS 130 (230)
T ss_dssp CCCCCCCSCG-------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCCEEEEECC
T ss_pred eCCcCCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCeEEEEee
Confidence 6643222211 1223333322 2233344566666655 355667776554
No 439
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.92 E-value=4.2 Score=37.08 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=54.8
Q ss_pred CceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~~ 249 (384)
|.+||=.| |.||.+.+++..+ .....|+.++.+..+++.+.+.++..|. .+.++..|..+..... ..+.
T Consensus 4 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITG-ASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 55666555 4567777777655 3345899999999999999888887764 4667778988743210 1147
Q ss_pred CCEEEEcCC
Q 016730 250 VDRVLLDAP 258 (384)
Q Consensus 250 fD~VllDaP 258 (384)
.|.++.+|-
T Consensus 82 iD~lVnnAG 90 (264)
T 3tfo_A 82 IDVLVNNAG 90 (264)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999998764
No 440
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=87.89 E-value=6.5 Score=35.18 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=52.9
Q ss_pred ceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCCCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNTV 250 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~~f 250 (384)
.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+...|. ++.++..|..+.... . ..+.+
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4555444 56777888777553 335899999999998888777776664 466777898875321 1 11479
Q ss_pred CEEEEcCC
Q 016730 251 DRVLLDAP 258 (384)
Q Consensus 251 D~VllDaP 258 (384)
|.++..+-
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 441
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.81 E-value=1.5 Score=41.35 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=57.2
Q ss_pred cCCCCCceEEEecc--CCChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCC
Q 016730 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~ 247 (384)
..+++|++||-.|+ |-|..+..++... ..+|+++|.++++++.+++ +|.+.+ +..+..+.. .....
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~--~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHT--INYSTQDFAEVVREITGG 212 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHTT
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEE--EECCCHHHHHHHHHHhCC
Confidence 35788999998875 2233333444433 2589999999998887754 576532 222212211 11122
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
..+|.|+-. +|.. .+..+++.+ ++||+++..
T Consensus 213 ~~~d~vi~~---~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 243 (333)
T 1wly_A 213 KGVDVVYDS---IGKD--------------------------TLQKSLDCL----RPRGMCAAY 243 (333)
T ss_dssp CCEEEEEEC---SCTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred CCCeEEEEC---CcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 469998853 2321 245677775 999988754
No 442
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.68 E-value=0.67 Score=43.60 Aligned_cols=98 Identities=20% Similarity=0.192 Sum_probs=58.1
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
.++++|++||-.|++ |+.+..++++... ..+|+++|.++++++.+++ +|...+ +..+-.+.. ......
T Consensus 136 ~~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 136 YEIKPDEQFLFHAAA-GGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQV--INYREEDLVERLKEITGGK 208 (327)
T ss_dssp SCCCTTCEEEESSTT-BHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTTC
T ss_pred hCCCCCCEEEEECCC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEE--EECCCccHHHHHHHHhCCC
Confidence 357889999988743 4444444443321 2489999999999887754 576532 222211211 111224
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.+|.|+-. +| +- .+..+++.+ ++||+++..
T Consensus 209 ~~D~vi~~---~g-~~-------------------------~~~~~~~~l----~~~G~iv~~ 238 (327)
T 1qor_A 209 KVRVVYDS---VG-RD-------------------------TWERSLDCL----QRRGLMVSF 238 (327)
T ss_dssp CEEEEEEC---SC-GG-------------------------GHHHHHHTE----EEEEEEEEC
T ss_pred CceEEEEC---Cc-hH-------------------------HHHHHHHHh----cCCCEEEEE
Confidence 69998763 33 21 246677776 999998754
No 443
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.66 E-value=0.53 Score=44.40 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=56.7
Q ss_pred CCCCCc-eEEEecc-C-CChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEe-cCCCCcccccCCCCC
Q 016730 175 APQEKE-RVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCN-YDGNELPKVLGLNTV 250 (384)
Q Consensus 175 ~~~~g~-~VLD~ca-g-pGgkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~-~D~~~~~~~~~~~~f 250 (384)
++++|+ +||=.|| | -|..+..++..++ .+|++++.++++++.++ ++|.+.+.-.. .|...... .....+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~v~~~~~~~~~~~~~-~~~~~~ 218 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLK----QLGASEVISREDVYDGTLKA-LSKQQW 218 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHH----HHTCSEEEEHHHHCSSCCCS-SCCCCE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEEEECCCchHHHHHH-hhcCCc
Confidence 467886 8998876 2 2333445555543 47999999988887764 46876432211 11111111 122468
Q ss_pred CEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 251 D~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
|.|+- |+|. ..+..+++.+ ++||+++..
T Consensus 219 d~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVD---PVGG--------------------------KQLASLLSKI----QYGGSVAVS 246 (330)
T ss_dssp EEEEE---SCCT--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred cEEEE---CCcH--------------------------HHHHHHHHhh----cCCCEEEEE
Confidence 98864 2221 1346677776 999998754
No 444
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=87.62 E-value=3.5 Score=37.69 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+++|.++.+++.+.+.+...| ++.++..|..+.... . ..+
T Consensus 28 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTG-GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 366777555 56777887777553 33589999999988887776665444 577778888874221 1 114
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.++..|--
T Consensus 105 ~iD~lvnnAg~ 115 (276)
T 2b4q_A 105 RLDILVNNAGT 115 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987743
No 445
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.45 E-value=0.53 Score=44.99 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=58.4
Q ss_pred cCCCCC--ceEEEeccCCChHHHHHHHHccC-Cc-eEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----ccc
Q 016730 174 LAPQEK--ERVIDMAAAPGGKTTYIAALMKN-TG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVL 245 (384)
Q Consensus 174 L~~~~g--~~VLD~cagpGgkt~~la~~~~~-~g-~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~ 245 (384)
..+++| ++||-.|| .|+.+..+++++.. .. +|+++|.++++++.+++ .+|...+ +..+..++. ...
T Consensus 154 ~~~~~g~~~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS---ELGFDAA--INYKKDNVAEQLRESC 227 (357)
T ss_dssp SCCCTTSCCEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TSCCSEE--EETTTSCHHHHHHHHC
T ss_pred cCCCCCCccEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH---HcCCceE--EecCchHHHHHHHHhc
Confidence 357889 99998876 34555554444332 23 89999999988876653 2676532 222212211 111
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
. +.+|.|+-.+ |. ..+..+++.+ ++||+++..
T Consensus 228 ~-~~~d~vi~~~---G~--------------------------~~~~~~~~~l----~~~G~iv~~ 259 (357)
T 2zb4_A 228 P-AGVDVYFDNV---GG--------------------------NISDTVISQM----NENSHIILC 259 (357)
T ss_dssp T-TCEEEEEESC---CH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred C-CCCCEEEECC---CH--------------------------HHHHHHHHHh----ccCcEEEEE
Confidence 1 2689887532 20 1356778876 999998854
No 446
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.44 E-value=2.5 Score=38.03 Aligned_cols=81 Identities=21% Similarity=0.143 Sum_probs=55.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHc--CCceEEEEecCCCCccccc--------C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL--------G 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~--g~~~v~~~~~D~~~~~~~~--------~ 246 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++.+..+++.+.+.+... +...+.++..|..+..... .
T Consensus 6 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITG-ASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEES-TTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 355677555 45667777776543 2358999999999999988888776 3346777788988743210 1
Q ss_pred CCCCCEEEEcCCC
Q 016730 247 LNTVDRVLLDAPC 259 (384)
Q Consensus 247 ~~~fD~VllDaPC 259 (384)
.+..|.++.+|--
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1478999987753
No 447
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.44 E-value=6.3 Score=36.77 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=55.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCcccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~ 244 (384)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+ .++++.+.+.+...|. .+.++..|..+....
T Consensus 45 ~gk~~lVTG-as~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITG-AARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 466777555 55677777776553 34589999886 7788887777777765 467778898875321
Q ss_pred ---c-----CCCCCCEEEEcCCCCCC
Q 016730 245 ---L-----GLNTVDRVLLDAPCSGT 262 (384)
Q Consensus 245 ---~-----~~~~fD~VllDaPCSg~ 262 (384)
. ..+.+|.++.+|-.+..
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~ 148 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQ 148 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 0 11479999997754433
No 448
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.43 E-value=0.51 Score=45.42 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=43.0
Q ss_pred CCC-CCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCC-CcccccCCCCCC
Q 016730 175 APQ-EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (384)
Q Consensus 175 ~~~-~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~-~~~~~~~~~~fD 251 (384)
.++ +|++||=.|+ |+.+..++++... ..+|++++.++++++.++ +++|.+.+ +..+-. .+.... +.+|
T Consensus 183 ~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~lGa~~v--~~~~~~~~~~~~~--~~~D 253 (366)
T 1yqd_A 183 GLDEPGKHIGIVGL--GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNFGADSF--LVSRDQEQMQAAA--GTLD 253 (366)
T ss_dssp TCCCTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTSCCSEE--EETTCHHHHHHTT--TCEE
T ss_pred CcCCCCCEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcCCceE--EeccCHHHHHHhh--CCCC
Confidence 566 8999999875 5555544444322 248999999998877654 25676533 222111 111111 4699
Q ss_pred EEEE
Q 016730 252 RVLL 255 (384)
Q Consensus 252 ~Vll 255 (384)
+|+-
T Consensus 254 ~vid 257 (366)
T 1yqd_A 254 GIID 257 (366)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 449
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.28 E-value=1 Score=42.04 Aligned_cols=79 Identities=8% Similarity=0.048 Sum_probs=51.3
Q ss_pred CceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cCCCCCCEEE
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNTVDRVL 254 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~~~~fD~Vl 254 (384)
+.+|| +.-|+|+.+.++++.+.. ...|++++.+........+.+....-.++.++.+|..+.... .....+|.|+
T Consensus 5 ~~~vl-VTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTIL-VTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEE-EecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 45677 555788999988876543 358999998766555554444443223567778898875321 2113789999
Q ss_pred EcCC
Q 016730 255 LDAP 258 (384)
Q Consensus 255 lDaP 258 (384)
..+.
T Consensus 84 h~A~ 87 (341)
T 3enk_A 84 HFAA 87 (341)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 8664
No 450
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=87.01 E-value=7 Score=34.81 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+|+.+.+++..+. ....|++++. ++..++.+.+.+...+. ++.++..|..+.... . ..
T Consensus 6 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356677444 56788888877543 3458999999 88888888777776653 567778898864321 1 01
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+.+|.|+..+..
T Consensus 84 g~id~li~~Ag~ 95 (261)
T 1gee_A 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 451
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=86.99 E-value=5 Score=36.67 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=68.4
Q ss_pred CCceEEEeccCC-ChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAP-GGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagp-Ggkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.|++. ||.+.+++..+. ....|++++.++..-+.+.+.....| ++.++..|..+.... . ..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888788763 788888877553 34589999988752222222222333 255667888864321 0 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.++..|-.....-+. .| ....+.++..... .-...+++.+...+ .+.+|++|+.+.
T Consensus 98 g~iD~lv~~Ag~~~~~~~~-~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~g~iv~isS 161 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFK-GG--VIDTSREGFKIAMDISVYSLIALTRELLPLM---EGRNGAIVTLSY 161 (285)
T ss_dssp SCCCEEEECCCCCCGGGGS-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGG---TTSCCEEEEEEC
T ss_pred CCCCEEEECCCCCCcccCC-CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---HHcCCEEEEEcc
Confidence 4789999877432210000 01 1122333333222 22334555666654 236788887653
No 452
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=86.94 E-value=14 Score=33.83 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=44.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEe-CCHHHHHHHHHHHH-HcCCceEEEEecCCCCcc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D-~~~~rl~~l~~n~~-r~g~~~v~~~~~D~~~~~ 242 (384)
.|.+||=.| |.||.+.+++..+- ....|+.++ .++.+++.+.+.+. ..| .++.++..|..+..
T Consensus 8 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 355677555 55777888777553 345899999 99999888887776 555 35677788887755
No 453
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.88 E-value=4.9 Score=36.72 Aligned_cols=81 Identities=11% Similarity=0.108 Sum_probs=55.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.++.++.+++.+.+.+...|. .+.++..|..+.... . ..+
T Consensus 23 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTG-VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356777555 55667777776543 345899999999999988888877664 467778898875321 0 114
Q ss_pred CCCEEEEcCCCC
Q 016730 249 TVDRVLLDAPCS 260 (384)
Q Consensus 249 ~fD~VllDaPCS 260 (384)
..|.++.+|-..
T Consensus 101 ~id~lv~nAg~~ 112 (279)
T 3sju_A 101 PIGILVNSAGRN 112 (279)
T ss_dssp SCCEEEECCCCC
T ss_pred CCcEEEECCCCC
Confidence 789999877543
No 454
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.84 E-value=2.6 Score=39.88 Aligned_cols=75 Identities=12% Similarity=0.162 Sum_probs=52.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccCC--c-eEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc---ccCCCCCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNT--G-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVD 251 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~--g-~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~---~~~~~~fD 251 (384)
.|.+|| +..|+|+.+.+++..+... . .|++++.++.+...+.+.+. -.++.++.+|.++... .+ ..+|
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~--~~~D 93 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYAL--EGVD 93 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHT--TTCS
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHH--hcCC
Confidence 366777 5557799999888765433 3 89999999988776655442 2457788899887532 23 4689
Q ss_pred EEEEcCC
Q 016730 252 RVLLDAP 258 (384)
Q Consensus 252 ~VllDaP 258 (384)
.|+..+.
T Consensus 94 ~Vih~Aa 100 (344)
T 2gn4_A 94 ICIHAAA 100 (344)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998664
No 455
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=86.76 E-value=6.2 Score=36.20 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=55.0
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
+|.+||=.| |.||.+.+++..+ .....|+.+|.+..+++.+.+.+...|. .+.++..|..+.... . ..+
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITG-AGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 466777555 5566777777654 3345899999999999888887766554 467778898875221 0 114
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
..|.++.+|--
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987753
No 456
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=86.72 E-value=6.1 Score=34.69 Aligned_cols=78 Identities=14% Similarity=0.113 Sum_probs=52.4
Q ss_pred eEEEeccCCChHHHHHHHHccCC-ceEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCCCC
Q 016730 181 RVIDMAAAPGGKTTYIAALMKNT-GLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNTV 250 (384)
Q Consensus 181 ~VLD~cagpGgkt~~la~~~~~~-g~V~a~-D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~~f 250 (384)
+|| +.-|+|+.+.+++..+... ..|+++ +.++.+++.+.+.+...|.....++..|..+..... ..+.+
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 455 4456788888888766443 478887 889988888877777766543332678887753210 01478
Q ss_pred CEEEEcCCC
Q 016730 251 DRVLLDAPC 259 (384)
Q Consensus 251 D~VllDaPC 259 (384)
|.|+..+..
T Consensus 82 d~li~~Ag~ 90 (245)
T 2ph3_A 82 DTLVNNAGI 90 (245)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987754
No 457
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=86.71 E-value=6.6 Score=35.61 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=54.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC-
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL- 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~- 247 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+...|. ++.++..|..+.... . ..
T Consensus 20 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTG-GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-CcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 366777555 56777777777553 335899999999988888777766664 466778898875321 1 11
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.++..+-
T Consensus 98 g~id~lv~nAg 108 (273)
T 1ae1_A 98 GKLNILVNNAG 108 (273)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 57899998764
No 458
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.64 E-value=7.7 Score=35.02 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=55.2
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCC-ceEEEEecCCCCcccc---c-CCCCCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKV---L-GLNTVD 251 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~-~~v~~~~~D~~~~~~~---~-~~~~fD 251 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.+..+++.+.+.+...+. ..+..+..|..+.... . ..+..|
T Consensus 9 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 366777555 55777777777543 345899999999999888887776643 3466777888764211 0 125799
Q ss_pred EEEEcCCC
Q 016730 252 RVLLDAPC 259 (384)
Q Consensus 252 ~VllDaPC 259 (384)
.++.+|--
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987643
No 459
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.51 E-value=7.2 Score=35.28 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=55.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCcccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~ 244 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.+ .++++.+.+.+...|. .+.++..|..+....
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 466777555 55677777777553 34589999987 8888888887777774 577778998875321
Q ss_pred ---c-----CCCCCCEEEEcCC
Q 016730 245 ---L-----GLNTVDRVLLDAP 258 (384)
Q Consensus 245 ---~-----~~~~fD~VllDaP 258 (384)
. ..+..|.++.+|-
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 1 1147999998764
No 460
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.46 E-value=7.2 Score=35.00 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=52.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.+.++++.+.+.+ +- .+.++..|..+.... . ..+
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP-AAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-CceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 466777555 56777888877553 3458999999998877665544 32 467778898875321 1 114
Q ss_pred CCCEEEEcCCCC
Q 016730 249 TVDRVLLDAPCS 260 (384)
Q Consensus 249 ~fD~VllDaPCS 260 (384)
.+|.++..|--+
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 799999977543
No 461
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=86.44 E-value=6.1 Score=36.41 Aligned_cols=79 Identities=15% Similarity=0.116 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |+||.+.+++..+- ....|++++.++.+++.+.+.+...|. .+.++..|..+.... . ..+
T Consensus 33 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTG-ASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 366777555 56777887777543 345899999999998888777776664 456677898874321 1 124
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.++..+-
T Consensus 111 ~iD~lvnnAg 120 (291)
T 3cxt_A 111 IIDILVNNAG 120 (291)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6999998764
No 462
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.18 E-value=2.2 Score=40.60 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=43.9
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcc----cccCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~----~~~~~~ 248 (384)
.++++|++||-.|+ .|+.+..++++.. ...+|+++|.++++++.++ .+|.+.+ +..+..++. ....+.
T Consensus 158 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 158 GNVQAGDYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE----KLGAAAG--FNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred cCCCCCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcEE--EecCChHHHHHHHHHhcCC
Confidence 35788999997764 3444444444332 1248999999999988763 4576532 222222211 111224
Q ss_pred CCCEEEE
Q 016730 249 TVDRVLL 255 (384)
Q Consensus 249 ~fD~Vll 255 (384)
.+|.|+-
T Consensus 231 ~~d~vi~ 237 (354)
T 2j8z_A 231 GVNLILD 237 (354)
T ss_dssp CEEEEEE
T ss_pred CceEEEE
Confidence 6999876
No 463
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=86.14 E-value=3 Score=36.96 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=51.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~-D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+|+.+.+++..+.. ...|+++ +.++..++.+.+.+...+. ++.++..|..+.... . ..
T Consensus 4 ~~~~vlItG-asggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTG-SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356677444 568888888775533 3478888 6677777777777766664 467778898875321 1 01
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+.+|.|+..+..
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 464
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=86.12 E-value=1 Score=42.77 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=42.1
Q ss_pred CCCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc----cCCCCCC
Q 016730 177 QEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGLNTVD 251 (384)
Q Consensus 177 ~~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~----~~~~~fD 251 (384)
++|+.++=+.+|.|+.+..++++... ..+|+++|.++++++.++ ++|.+.+ +..+..++... ..+..+|
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV--LNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE--EETTSTTHHHHHHHHHHHHCCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE--EECCcHHHHHHHHHHhcCCCCc
Confidence 55643344666777766655544322 248999999999988775 4787543 23332222111 1113699
Q ss_pred EEEE
Q 016730 252 RVLL 255 (384)
Q Consensus 252 ~Vll 255 (384)
+|+-
T Consensus 236 ~vid 239 (349)
T 3pi7_A 236 IFLD 239 (349)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 465
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.11 E-value=8.7 Score=35.38 Aligned_cols=79 Identities=20% Similarity=0.218 Sum_probs=54.4
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCcccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~ 244 (384)
.|.+||=.|++ ||.+.+++..+ .....|+++|.+ .++++.+.+.++..|. ++.++..|..+....
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH
Confidence 46677766654 56677777654 334589999987 7888888888877775 577778998875321
Q ss_pred c--------CCCCCCEEEEcCC
Q 016730 245 L--------GLNTVDRVLLDAP 258 (384)
Q Consensus 245 ~--------~~~~fD~VllDaP 258 (384)
. ..+..|.++.+|-
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 0 1147999998764
No 466
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.03 E-value=5.3 Score=35.91 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.++++++.+.+.++..+. .+.++..|..+..... ..+
T Consensus 5 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356677445 56777887777553 345899999999999888877765553 5777788988753210 114
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
..|.++.+|-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 467
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=86.02 E-value=8.8 Score=34.04 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=55.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cC-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG-----LN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~-----~~ 248 (384)
.+.+||=.| |+|+.+.+++..+. ....|++++.++.+++.+.+.++..+. ++.++..|..+.... .. .+
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 366777555 56788888887553 345899999999988888777776654 477778898875321 10 13
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.|+..+.
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 468
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=86.02 E-value=7.6 Score=35.21 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=54.2
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeC-------------CHHHHHHHHHHHHHcCCceEEEEecCCCCccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~-------------~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~ 243 (384)
.|.+||=.| |.||.+.+++..+ .....|+.+|. +..+++.+.+.+...+. .+.++..|..+...
T Consensus 10 ~~k~~lVTG-as~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITG-AARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 466777555 4566677777654 33458999998 78888888777777664 46777889887532
Q ss_pred cc--------CCCCCCEEEEcCCC
Q 016730 244 VL--------GLNTVDRVLLDAPC 259 (384)
Q Consensus 244 ~~--------~~~~fD~VllDaPC 259 (384)
.. ..+..|.++.+|--
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 11 01479999987743
No 469
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=86.02 E-value=5.8 Score=35.86 Aligned_cols=123 Identities=11% Similarity=0.054 Sum_probs=71.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccCC-ceEEEEeC---CHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEM---KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------- 245 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~---~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~-------- 245 (384)
.|.+||=.|+ .||.+.+++..+-.. ..|+.++. +.++++.+.+.+...|. ++.++..|..+.....
T Consensus 10 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGG-IKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 4667775555 566788888766443 47888765 45566666666665554 5777788988753210
Q ss_pred CCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 246 ~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
..+..|.++.+|-....+-+ ...+.++.... ..-...+++.++..+ +++|++|+.+.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~~g~iv~isS 148 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPI-------VETSEAEFDAMDTINNKVAYFFIKQAAKHM----NPNGHIITIAT 148 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHTTE----EEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHhh----cCCCEEEEEec
Confidence 11478999987643222211 12234443322 222334555566654 77899988754
No 470
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=85.95 E-value=10 Score=34.30 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=55.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC------------HHHHHHHHHHHHHcCCceEEEEecCCCCcccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~ 244 (384)
.|.+||=.|+ .||.+.+++..+- ....|+.+|.+ .+.++.+.+.+...|. .+.++..|..+....
T Consensus 9 ~~k~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGG-ARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 4667775554 5677777777553 34589999986 7778877777777774 467778898875321
Q ss_pred ---c-----CCCCCCEEEEcCCCC
Q 016730 245 ---L-----GLNTVDRVLLDAPCS 260 (384)
Q Consensus 245 ---~-----~~~~fD~VllDaPCS 260 (384)
. ..+..|.++.+|--+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCC
Confidence 1 014799999877543
No 471
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.95 E-value=6.6 Score=35.40 Aligned_cols=66 Identities=12% Similarity=0.229 Sum_probs=49.2
Q ss_pred ceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccccCCCCCCEEEEcCC
Q 016730 180 ERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (384)
Q Consensus 180 ~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~fD~VllDaP 258 (384)
.+||=.| | |..+.+++..+.. ...|++++.++.....+.. .++.++.+|..++. . ..+|.|+.-+.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--~--~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--L--DGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--C--TTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc--c--CCCCEEEECCC
Confidence 5788888 5 9999999886643 3489999999877655432 24677788988855 3 67999998654
No 472
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=85.91 E-value=4.4 Score=35.57 Aligned_cols=74 Identities=19% Similarity=0.173 Sum_probs=48.4
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~~ 249 (384)
+.+|| +..|+|+.+.+++..+. ....|++++.++.+++.+.+.+ + ++.++..|..+.... . ..+.
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---E--GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h--hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 44566 45567888888887653 3358999999988877665433 2 456677888864321 0 0147
Q ss_pred CCEEEEcCC
Q 016730 250 VDRVLLDAP 258 (384)
Q Consensus 250 fD~VllDaP 258 (384)
+|.|+..+.
T Consensus 79 id~li~~Ag 87 (234)
T 2ehd_A 79 LSALVNNAG 87 (234)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 473
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=85.78 E-value=9.6 Score=33.99 Aligned_cols=121 Identities=15% Similarity=0.182 Sum_probs=68.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=. -|+||.+.+++..+. ....|++++.++.+++.+.+.+ +. .+.++..|..+.... . ..+
T Consensus 5 ~~k~vlVT-Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 5 QGKVALVT-GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GE-RSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTCEEEET-TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CT-TEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35566644 456778888877553 3358999999998877665544 43 467778898875321 0 014
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHH----HHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQ----KQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q----~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+|.++..+-....+-+ ...+.++.......- ..+.+.++..+ .+.||++|+.+.
T Consensus 80 ~id~lv~~Ag~~~~~~~-------~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~---~~~~g~iv~isS 138 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDM-------ETGRLEDFSRLLKINTESVFIGCQQGIAAM---KETGGSIINMAS 138 (253)
T ss_dssp SCCEEEECCCCCCCBCT-------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTTCEEEEEECC
T ss_pred CCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHhhcHHHHHHHHHHHHHH---HHcCCEEEEEcc
Confidence 68999987643322211 122334333322221 22344455544 244588887653
No 474
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.71 E-value=4.4 Score=36.90 Aligned_cols=123 Identities=16% Similarity=0.130 Sum_probs=72.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~-D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+ ..+..+++.+.+.+...|. .+.++..|..+..... ..
T Consensus 26 ~~k~~lVTG-as~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTG-ASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEES-CSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 466777555 55667777776543 23466665 5577788888888877765 4667788988753211 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+..|.++.+|--...+.+ ...+.++... ...-...+++.++..+ +.+|++|+.+.
T Consensus 104 g~iD~lvnnAG~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~----~~~g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTI-------AETGDAVFDRVIAVNLKGTFNTLREAAQRL----RVGGRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCeEEEEeC
Confidence 478999987643222211 1223333322 2222334566666664 77899988764
No 475
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.68 E-value=7 Score=35.72 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=56.9
Q ss_pred CCceEEEeccCCChHHHHHHHHc-cCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~-~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~~ 248 (384)
+|..+|=.|++. |.+..++..+ .....|+.+|.++++++.+.+.++..|.+ +..+..|..+..... ..+
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~-~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 477777666555 4566666544 34568999999999999999999988864 666788998753210 126
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
+.|.++-+|-
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999888764
No 476
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=85.62 E-value=11 Score=34.36 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=69.2
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |.||.+.+++..+. ....|+.+|.++.+++.+.+. ++. .+.++..|..+.... . ..+
T Consensus 26 ~~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTG-GGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGS-KAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 366777555 55677777777553 345899999999887766554 343 466777898874321 0 114
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+|.++.+|--+..+-+. ..+.++... ...-...+++.++..+.. +.+|++|+.+.
T Consensus 101 ~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS 160 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVV-------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRR--NGGGSIINTTS 160 (277)
T ss_dssp CCCEEEECCCCCCCBCTT-------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TTCEEEEEECC
T ss_pred CCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEECc
Confidence 789999977533333221 123333322 122223345555555410 24678887654
No 477
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.53 E-value=13 Score=33.99 Aligned_cols=124 Identities=11% Similarity=0.142 Sum_probs=71.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHH-HHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKAS-RLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~-rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.|+ .||.+.+++..+. ....|+.++.+.. ..+.+.+.++..|. .+.++..|..+.... . ..
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4677776664 5667777777553 3358889998765 45555666666664 467778898875321 0 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.++.++--... ... ....+.++... ...-...+++.++..+ +.+|++|+.+.
T Consensus 124 g~iD~lvnnAg~~~~-----~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~----~~~g~iv~isS 183 (291)
T 3ijr_A 124 GSLNILVNNVAQQYP-----QQG-LEYITAEQLEKTFRINIFSYFHVTKAALSHL----KQGDVIINTAS 183 (291)
T ss_dssp SSCCEEEECCCCCCC-----CSS-GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC----CTTCEEEEECC
T ss_pred CCCCEEEECCCCcCC-----CCC-cccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hhCCEEEEEec
Confidence 478999987642211 100 11123333332 2223344566666654 78899887654
No 478
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=85.38 E-value=13 Score=34.81 Aligned_cols=63 Identities=16% Similarity=0.125 Sum_probs=45.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEe-CCHHHHHHHHHHHH-HcCCceEEEEecCCCCcc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D-~~~~rl~~l~~n~~-r~g~~~v~~~~~D~~~~~ 242 (384)
.|.+|| +.-|.||.+.+++..+. ....|+.++ .++.+++.+.+.+. ..| .++.++..|..+..
T Consensus 45 ~~k~~l-VTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVAL-VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 355677 44556778888877553 345899999 99999888887776 455 35777788888754
No 479
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=85.32 E-value=5.1 Score=36.53 Aligned_cols=79 Identities=14% Similarity=0.124 Sum_probs=53.8
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHH-cCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r-~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |.||.+.+++..+-. ...|+.++.+..+++.+.+.+.. .| .++.++..|..+.... . ..
T Consensus 26 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITG-GGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 466777555 456778887776543 34899999999988877766644 34 3577778898875221 0 11
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+..|.++.+|-
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999998764
No 480
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.30 E-value=7.5 Score=34.44 Aligned_cols=78 Identities=17% Similarity=0.166 Sum_probs=51.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-CCCCCCE
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-GLNTVDR 252 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-~~~~fD~ 252 (384)
++.+||=.| |+||.+.+++..+. ....|+.++.+..+++.+.+.+. .++.+...|..+.... . ..+..|.
T Consensus 13 ~~k~vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITG-ASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 567788555 56777888777553 33589999999998887766542 3567777888764221 1 1247999
Q ss_pred EEEcCCCC
Q 016730 253 VLLDAPCS 260 (384)
Q Consensus 253 VllDaPCS 260 (384)
++..|...
T Consensus 88 li~~Ag~~ 95 (249)
T 3f9i_A 88 LVCNAGIT 95 (249)
T ss_dssp EEECCC--
T ss_pred EEECCCCC
Confidence 99977543
No 481
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=85.30 E-value=3.9 Score=37.15 Aligned_cols=127 Identities=11% Similarity=0.087 Sum_probs=68.1
Q ss_pred CCceEEEeccC-CChHHHHHHHHccC-CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAA-PGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cag-pGgkt~~la~~~~~-~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.|++ +||.+.+++..+.. ...|+.++.++..-+.+.+..+..| .+.++..|..+.... . ..
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36678878876 48888888876543 3589999988752222222223334 256667888874221 0 11
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHH----HHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~----~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
+.+|.++..+-.....-+ ..| ....+.++..... .-...+++.+...+ +++|++|+.+.
T Consensus 83 g~id~lv~nAg~~~~~~~-~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~isS 145 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEAL-EGS--LLETSKSAFNTAMEISVYSLIELTNTLKPLL----NNGASVLTLSY 145 (275)
T ss_dssp SCEEEEEECCCCCCGGGG-SSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEEEC
T ss_pred CCCCEEEECCccCccccC-CCC--cccCCHHHHHHHHHHHhHHHHHHHHHHHHHh----ccCCEEEEEec
Confidence 478999987642211000 011 1122344333222 22334555555554 56788887654
No 482
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.24 E-value=0.76 Score=43.72 Aligned_cols=94 Identities=20% Similarity=0.202 Sum_probs=56.5
Q ss_pred cCCCCCceEEEeccC-C-ChHHHHHHHHccCCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc----ccCC
Q 016730 174 LAPQEKERVIDMAAA-P-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (384)
Q Consensus 174 L~~~~g~~VLD~cag-p-Ggkt~~la~~~~~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~----~~~~ 247 (384)
..+++|++||=.||+ + |..+..++...+ .+|+++ .++++++.+ +.+|.+. + . +..++.. ...+
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~----~~lGa~~--i-~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYV----RDLGATP--I-D-ASREPEDYAAEHTAG 214 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHH----HHHTSEE--E-E-TTSCHHHHHHHHHTT
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHH----HHcCCCE--e-c-cCCCHHHHHHHHhcC
Confidence 357899999988742 2 334444555443 489999 888887665 4468754 2 2 2222211 1123
Q ss_pred CCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 248 ~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
..||+|+- |+|. ..+..+++.+ ++||++|..
T Consensus 215 ~g~D~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYD---TLGG--------------------------PVLDASFSAV----KRFGHVVSC 245 (343)
T ss_dssp SCEEEEEE---SSCT--------------------------HHHHHHHHHE----EEEEEEEES
T ss_pred CCceEEEE---CCCc--------------------------HHHHHHHHHH----hcCCeEEEE
Confidence 57998864 3331 1356677775 999998853
No 483
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=85.17 E-value=1.4 Score=41.26 Aligned_cols=86 Identities=13% Similarity=0.002 Sum_probs=49.8
Q ss_pred ecCCCCcccccCCCCCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 235 NYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 235 ~~D~~~~~~~~~~~~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
..|....... +++|+|++|..-..+|. +-.+=......++. ++..|.+.| +|||++|--.--
T Consensus 195 ~lDfg~p~~~---~k~DvV~SDMApn~sGh----------~yqQC~DHarii~L-al~fA~~vL----kPGGtfV~Kvyg 256 (320)
T 2hwk_A 195 RLDLGIPGDV---PKYDIIFVNVRTPYKYH----------HYQQCEDHAIKLSM-LTKKACLHL----NPGGTCVSIGYG 256 (320)
T ss_dssp CGGGCSCTTS---CCEEEEEEECCCCCCSC----------HHHHHHHHHHHHHH-THHHHGGGE----EEEEEEEEEECC
T ss_pred ccccCCcccc---CcCCEEEEcCCCCCCCc----------cccccchHHHHHHH-HHHHHHHhc----CCCceEEEEEec
Confidence 4555543322 67999999976555553 10100112222233 778888886 999999966544
Q ss_pred CCccccHHHHHHHHhcC-CCEEeec
Q 016730 315 IMVTENEAVIDYALKKR-DVKLVPC 338 (384)
Q Consensus 315 i~~~ENe~vv~~~l~~~-~~~l~~~ 338 (384)
.-..+-|+++..+.+.+ .++.+.+
T Consensus 257 gaDr~se~lv~~LaR~F~~Vr~vKP 281 (320)
T 2hwk_A 257 YADRASESIIGAIARQFKFSRVCKP 281 (320)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEECC
T ss_pred CCcccHHHHHHHHHHhcceeeeeCC
Confidence 43334566666666655 4556554
No 484
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=85.16 E-value=7.8 Score=34.88 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=53.9
Q ss_pred CCceEEEeccCCChHHHHHHHHccC-CceEEEE-eCCHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~-~g~V~a~-D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+.. ...|+.+ +.+..+++.+.+.++..|. ++.++..|..+..... ..
T Consensus 3 ~~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 355667444 567778888776543 3467775 8899999888888877664 4677788988753210 11
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
++.|.++.+|-
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998764
No 485
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.14 E-value=5.6 Score=36.04 Aligned_cols=121 Identities=15% Similarity=0.113 Sum_probs=67.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
.|.+||=.| |+||.+.+++..+. ....|+.++.++++++.+.+. ++ .++.++..|..+.... . ..+
T Consensus 5 ~~k~vlITG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 5 SGKTILVTG-AASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LE-AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CC-SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hc-CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356677555 56777887777553 335899999998877665443 33 3567778898875321 0 014
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHH----HHHHHHHHHHHHHchhccCCCCcEEEEEecc
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l----~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCS 314 (384)
.+|.++..+-....+-+ +..+.++.... ..-...+++.+...+ +.+|++|+.+..
T Consensus 80 ~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~isS~ 138 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALS-------WNLPLEAWEKVLRVNLTGSFLVARKAGEVL----EEGGSLVLTGSV 138 (263)
T ss_dssp CCCEEEEGGGGTTTTC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHC----CTTCEEEEECCC
T ss_pred CCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCEEEEEecc
Confidence 68999987743222211 12233333221 122233445555543 447888876543
No 486
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=85.04 E-value=7 Score=34.58 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=52.0
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceE-EEEecCCCCccccc---C----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGNELPKVL---G----LN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v-~~~~~D~~~~~~~~---~----~~ 248 (384)
.|.+||=.| |+|+.+.+++..+. ....|++++.++.+++.+.+.+ +. .+ .++..|..+..... . .+
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 356777555 56788888877553 3358999999998877665544 33 34 67788988753211 0 14
Q ss_pred CCCEEEEcCCCCC
Q 016730 249 TVDRVLLDAPCSG 261 (384)
Q Consensus 249 ~fD~VllDaPCSg 261 (384)
.+|.|+..+....
T Consensus 85 ~id~li~~Ag~~~ 97 (254)
T 2wsb_A 85 PVSILVNSAGIAR 97 (254)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCccCC
Confidence 7899999775433
No 487
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=85.00 E-value=6 Score=35.39 Aligned_cols=77 Identities=9% Similarity=0.085 Sum_probs=49.7
Q ss_pred CceEEEeccCCChHHHHHHHHccCC----ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cC-----
Q 016730 179 KERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG----- 246 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~~~----g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~----- 246 (384)
+.+||=.| |+|+.+.+++..+-.. ..|++++.+..+++.+.+.... + .++.++..|..+.... ..
T Consensus 21 ~k~vlITG-asggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 21 MNSILITG-CNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H-SNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp CSEEEESC-CSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C-TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C-CceEEEEecCCChHHHHHHHHHHHHh
Confidence 55677555 5688888888765443 4899999988766655433332 3 2577778898875321 10
Q ss_pred CC--CCCEEEEcCC
Q 016730 247 LN--TVDRVLLDAP 258 (384)
Q Consensus 247 ~~--~fD~VllDaP 258 (384)
.+ .+|.|+..+-
T Consensus 98 ~g~~~id~li~~Ag 111 (267)
T 1sny_A 98 TKDQGLNVLFNNAG 111 (267)
T ss_dssp HGGGCCSEEEECCC
T ss_pred cCCCCccEEEECCC
Confidence 01 6999998764
No 488
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=84.99 E-value=7 Score=37.85 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=51.2
Q ss_pred CCceEEEeccCCChHHHHHHHHccCC-ceEEEEeCCHH---HHHHHHHHHHHcC--------CceEEEEecCCCCccccc
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKAS---RLKSLTANLHRMG--------VTNTIVCNYDGNELPKVL 245 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~~~~---rl~~l~~n~~r~g--------~~~v~~~~~D~~~~~~~~ 245 (384)
++.+|| +.-|+|+.+.+++..+... ..|++++.++. .++.+.+.++... ...+.++.+|..+.....
T Consensus 68 ~~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEE-EECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEE-EecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 455677 4556799999888876544 47999988776 5556666554431 135778888887643222
Q ss_pred CCCCCCEEEEcCC
Q 016730 246 GLNTVDRVLLDAP 258 (384)
Q Consensus 246 ~~~~fD~VllDaP 258 (384)
....+|.|+..+.
T Consensus 147 ~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 147 LPENMDTIIHAGA 159 (427)
T ss_dssp CSSCCSEEEECCC
T ss_pred CcCCCCEEEECCc
Confidence 2368999998654
No 489
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=84.88 E-value=6.6 Score=35.91 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=54.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCccccc--------CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~~--------~~ 247 (384)
.|.+||=.| |.||.+.+++..+- ....|+.++. ++++++.+.+.+...|. .+.++..|..+..... ..
T Consensus 28 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTG-GRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466777555 55667777776543 3358989985 88888888888877764 4777788988753211 11
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+..|.++.+|-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 47899999774
No 490
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.86 E-value=0.68 Score=44.16 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=52.0
Q ss_pred cCCCCCceEEEeccCCChHHHHHHHHccC--CceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCccc---ccCCC
Q 016730 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLN 248 (384)
Q Consensus 174 L~~~~g~~VLD~cagpGgkt~~la~~~~~--~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~---~~~~~ 248 (384)
..+++|++||=.||+ |+.+....++... ...|++.+ +..+.+.++ +|.+.+. .. ..++.. ...+.
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~~--~~-~~~~~~~~~~~~~~ 207 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHLF--DR-NADYVQEVKRISAE 207 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEEE--ET-TSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEEE--cC-CccHHHHHHHhcCC
Confidence 357899999977763 4555555554432 35888888 555555442 6765432 22 222211 11235
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEE
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYs 311 (384)
.||+|+- |+|.. .+..+++.| ++||+++..
T Consensus 208 g~Dvv~d---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~ 237 (349)
T 4a27_A 208 GVDIVLD---CLCGD--------------------------NTGKGLSLL----KPLGTYILY 237 (349)
T ss_dssp CEEEEEE---ECC---------------------------------CTTE----EEEEEEEEE
T ss_pred CceEEEE---CCCch--------------------------hHHHHHHHh----hcCCEEEEE
Confidence 7998874 33321 124566775 999999854
No 491
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=84.82 E-value=8.6 Score=34.13 Aligned_cols=79 Identities=15% Similarity=0.212 Sum_probs=54.0
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
|.+|| +.-|+||.+.+++..+. ....|++++. ++.+++.+.+.+...|. ++.++..|..+.... . ..+
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55666 44566788888877553 3358999998 88888888777776664 466777898875321 1 014
Q ss_pred CCCEEEEcCCC
Q 016730 249 TVDRVLLDAPC 259 (384)
Q Consensus 249 ~fD~VllDaPC 259 (384)
.+|.++..+-.
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 2uvd_A 82 QVDILVNNAGV 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987643
No 492
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=84.63 E-value=10 Score=34.65 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHH-----cCCceEEEEecCCCCcccc---cC--
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHR-----MGVTNTIVCNYDGNELPKV---LG-- 246 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r-----~g~~~v~~~~~D~~~~~~~---~~-- 246 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.+..+++.+.+.+.. .+ .++.++..|..+.... ..
T Consensus 17 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ-ARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCC-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCC-ccEEEEecCCCCHHHHHHHHHHH
Confidence 366777555 56888888877553 335899999999998888777765 23 3577788998875321 10
Q ss_pred ---CCCCCEEEEcCC
Q 016730 247 ---LNTVDRVLLDAP 258 (384)
Q Consensus 247 ---~~~fD~VllDaP 258 (384)
.+.+|.|+..|-
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 136999998764
No 493
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=84.54 E-value=8.2 Score=34.50 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=54.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cC------C
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG------L 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~------~ 247 (384)
.|.+|| +..|+|+.+.+++..+- ....|++++.++.+++.+.+.++..|. ++.++..|..+.... .. .
T Consensus 13 ~~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356677 44567788888887553 335899999999988888777776664 466777888764221 10 1
Q ss_pred CCCCEEEEcCC
Q 016730 248 NTVDRVLLDAP 258 (384)
Q Consensus 248 ~~fD~VllDaP 258 (384)
+.+|.|+..+-
T Consensus 91 ~~id~li~~Ag 101 (266)
T 1xq1_A 91 GKLDILINNLG 101 (266)
T ss_dssp TCCSEEEEECC
T ss_pred CCCcEEEECCC
Confidence 46899998764
No 494
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=84.51 E-value=4.4 Score=40.14 Aligned_cols=114 Identities=9% Similarity=0.126 Sum_probs=64.4
Q ss_pred CCChHHHHHHHHccCC-ceEEEEeCCHHHHHHHHHH------------HHHc-CCceEEEEecCCCCcccccCCCCCCEE
Q 016730 188 APGGKTTYIAALMKNT-GLIYANEMKASRLKSLTAN------------LHRM-GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (384)
Q Consensus 188 gpGgkt~~la~~~~~~-g~V~a~D~~~~rl~~l~~n------------~~r~-g~~~v~~~~~D~~~~~~~~~~~~fD~V 253 (384)
|.|..++.+|..+... -.|+++|+++++++.+++. +++. .-.++.+. .|. ...|.|
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~---------~~aDvv 87 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP---------EASDVF 87 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC---------CCCSEE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch---------hhCCEE
Confidence 5566666666554433 4899999999999988752 1110 01234443 231 247999
Q ss_pred EEcCCCCCCCcC-C--CCchhhccCCHHHHHHHHHHHHHHHHHHHHchhccCCCCcEEEEEeccCCccccHHHHHHHHhc
Q 016730 254 LLDAPCSGTGVI-S--KDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (384)
Q Consensus 254 llDaPCSg~G~~-~--r~p~~~~~~~~~~i~~l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTCSi~~~ENe~vv~~~l~~ 330 (384)
++=.| +..- . +.||+.. + +...+..... |++|..+|+. .|+.|.-.+++.+.+++.
T Consensus 88 ii~Vp---Tp~~~~~~~~~Dl~~------V-------~~~~~~i~~~----l~~g~iVV~~-STV~pgtt~~v~~~i~e~ 146 (431)
T 3ojo_A 88 IIAVP---TPNNDDQYRSCDISL------V-------MRALDSILPF----LKKGNTIIVE-STIAPKTMDDFVKPVIEN 146 (431)
T ss_dssp EECCC---CCBCSSSSCBBCCHH------H-------HHHHHHHGGG----CCTTEEEEEC-SCCCTTHHHHTHHHHHHT
T ss_pred EEEeC---CCccccccCCccHHH------H-------HHHHHHHHHh----CCCCCEEEEe-cCCChhHHHHHHHHHHHH
Confidence 99555 2221 1 2344431 1 1112233333 4887666654 488888888888877775
Q ss_pred CC
Q 016730 331 RD 332 (384)
Q Consensus 331 ~~ 332 (384)
.+
T Consensus 147 ~g 148 (431)
T 3ojo_A 147 LG 148 (431)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 495
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.49 E-value=10 Score=34.33 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHH-HHcCCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~-~r~g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+ +..|. .+.++..|..+.... . ..
T Consensus 20 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTG-GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356677555 56777888777553 3358999999999888777666 44454 466677898874321 0 01
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+.+|.++..+-.
T Consensus 98 g~iD~lvnnAg~ 109 (267)
T 1vl8_A 98 GKLDTVVNAAGI 109 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999987643
No 496
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.44 E-value=9.3 Score=34.21 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=53.7
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHc-CCceEEEEecCCCCcccc---c-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKV---L-----GL 247 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~-g~~~v~~~~~D~~~~~~~---~-----~~ 247 (384)
.|.+||=.| |+||.+.+++..+. ....|++++.++.+++.+.+.+... |. ++.++..|..+.... . ..
T Consensus 6 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITG-SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356677454 56777888877553 3358999999999888777766554 53 467778898875321 1 01
Q ss_pred CCCCEEEEcCCC
Q 016730 248 NTVDRVLLDAPC 259 (384)
Q Consensus 248 ~~fD~VllDaPC 259 (384)
+.+|.++..+--
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 497
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=84.29 E-value=9.2 Score=34.79 Aligned_cols=79 Identities=15% Similarity=0.128 Sum_probs=53.3
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCC----------------HHHHHHHHHHHHHcCCceEEEEecCCCC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK----------------ASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~----------------~~rl~~l~~n~~r~g~~~v~~~~~D~~~ 240 (384)
.|.+||=.|++ ||.+.+++..+- ....|+.+|.+ .++++.+.+.+...+. .+.++..|..+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC
Confidence 46677755554 667777776543 34589999987 7788877777766654 47777889887
Q ss_pred ccccc--------CCCCCCEEEEcCC
Q 016730 241 LPKVL--------GLNTVDRVLLDAP 258 (384)
Q Consensus 241 ~~~~~--------~~~~fD~VllDaP 258 (384)
..... ..+..|.++.++-
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 53210 1147999998764
No 498
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=84.17 E-value=11 Score=33.28 Aligned_cols=78 Identities=9% Similarity=0.053 Sum_probs=51.1
Q ss_pred CCceEEEeccCCChHHHHHHHHcc-CCceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---cC-----CC
Q 016730 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG-----LN 248 (384)
Q Consensus 178 ~g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~~-----~~ 248 (384)
.|.+|| +..|+|+.+.+++..+. ....|++++.++.+++.+.+.+... .++.++..|..+.... .. .+
T Consensus 5 ~~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 5 DGKVAI-ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 355666 44567788888877553 3458999999998877665554321 3577778898874321 10 13
Q ss_pred CCCEEEEcCC
Q 016730 249 TVDRVLLDAP 258 (384)
Q Consensus 249 ~fD~VllDaP 258 (384)
.+|.|+..+.
T Consensus 82 ~id~li~~Ag 91 (251)
T 1zk4_A 82 PVSTLVNNAG 91 (251)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 499
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=84.14 E-value=4.8 Score=34.91 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=48.1
Q ss_pred eEEEeccCCChHHHHHHHHccCC-ceEEEEeCCHHHHHHHHHHHHHcCCceEEEEecCCCC-cc---cccCCCCCCEEEE
Q 016730 181 RVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LP---KVLGLNTVDRVLL 255 (384)
Q Consensus 181 ~VLD~cagpGgkt~~la~~~~~~-g~V~a~D~~~~rl~~l~~n~~r~g~~~v~~~~~D~~~-~~---~~~~~~~fD~Vll 255 (384)
+|| +.-|+|+.+.+++..+... ..|++++.++.++..+ .++.++.+|..+ .. ..+ ..+|.|+.
T Consensus 2 ~il-ItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~--~~~d~vi~ 69 (219)
T 3dqp_A 2 KIF-IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQL--HGMDAIIN 69 (219)
T ss_dssp EEE-EESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTT--TTCSEEEE
T ss_pred eEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHH--cCCCEEEE
Confidence 455 3446799999988876554 4899999988654332 467888899988 42 223 56999998
Q ss_pred cCCCCC
Q 016730 256 DAPCSG 261 (384)
Q Consensus 256 DaPCSg 261 (384)
.+..+.
T Consensus 70 ~ag~~~ 75 (219)
T 3dqp_A 70 VSGSGG 75 (219)
T ss_dssp CCCCTT
T ss_pred CCcCCC
Confidence 665433
No 500
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=83.99 E-value=13 Score=33.04 Aligned_cols=124 Identities=11% Similarity=0.123 Sum_probs=71.3
Q ss_pred CceEEEeccCCChHHHHHHHHcc-CCceEEEEeC-CHHHHHHHHHHHHHcCCceEEEEecCCCCcccc---c-----CCC
Q 016730 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (384)
Q Consensus 179 g~~VLD~cagpGgkt~~la~~~~-~~g~V~a~D~-~~~rl~~l~~n~~r~g~~~v~~~~~D~~~~~~~---~-----~~~ 248 (384)
+.+|| +..|.||.+.+++..+- ....|+.++. +.++++.+.+.++..|. .+.++..|..+.... . ..+
T Consensus 4 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSAL-VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 44566 44566777888877553 3347877776 67888888888887775 466678898875321 1 114
Q ss_pred CCCEEEEcCCCCCCCcCCCCchhhccCCHHHHHH----HHHHHHHHHHHHHHchhccCCCCcEEEEEec
Q 016730 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (384)
Q Consensus 249 ~fD~VllDaPCSg~G~~~r~p~~~~~~~~~~i~~----l~~~Q~~iL~~a~~~L~~~lkpGG~lvYsTC 313 (384)
.+|.++.+|--+..+.+. ..+.++... ...-...+++.++..+.. +.+|++|+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS 141 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLM-------RMKEQEWDDVIDTNLKGVFNCIQKATPQMLR--QRSGAIINLSS 141 (246)
T ss_dssp CCCEEEECCCCCCCCCTT-------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECC
T ss_pred CCCEEEECCCCCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEEcc
Confidence 789999977543333221 123333222 112223345555444310 35688887654
Done!