Query 016732
Match_columns 384
No_of_seqs 200 out of 1309
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:29:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016732.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016732hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 5.8E-73 1.3E-77 555.1 28.7 329 5-365 2-345 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.2E-70 4.8E-75 531.7 26.9 304 38-366 1-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 9.5E-60 2.1E-64 450.1 22.6 268 37-364 1-279 (281)
4 PRK15381 pathogenicity island 100.0 1.1E-57 2.4E-62 450.2 26.2 253 34-364 139-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 2.9E-54 6.3E-59 409.4 25.1 264 39-364 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 6.4E-39 1.4E-43 305.4 18.9 293 33-365 25-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 7.1E-27 1.5E-31 214.5 14.9 222 40-362 1-234 (234)
8 cd01839 SGNH_arylesterase_like 99.4 4E-12 8.8E-17 115.8 13.2 197 39-364 1-203 (208)
9 cd01832 SGNH_hydrolase_like_1 99.3 2.2E-11 4.8E-16 108.5 14.0 183 39-364 1-184 (185)
10 cd04501 SGNH_hydrolase_like_4 99.3 8.5E-11 1.8E-15 104.6 15.7 122 171-364 60-181 (183)
11 cd01836 FeeA_FeeB_like SGNH_hy 99.3 3E-11 6.4E-16 108.4 12.8 120 170-364 67-187 (191)
12 cd01823 SEST_like SEST_like. A 99.3 6E-11 1.3E-15 111.7 15.2 236 39-364 2-258 (259)
13 cd01834 SGNH_hydrolase_like_2 99.2 1.9E-10 4.2E-15 102.4 14.7 129 171-365 62-191 (191)
14 cd01830 XynE_like SGNH_hydrola 99.2 1.3E-10 2.8E-15 105.7 13.3 56 172-230 76-131 (204)
15 cd01838 Isoamyl_acetate_hydrol 99.2 3.1E-10 6.7E-15 101.7 13.8 131 170-364 63-197 (199)
16 cd01844 SGNH_hydrolase_like_6 99.2 9.7E-10 2.1E-14 97.6 16.1 174 39-364 1-175 (177)
17 cd01827 sialate_O-acetylestera 99.2 6.4E-10 1.4E-14 99.3 15.0 183 39-364 2-185 (188)
18 cd01821 Rhamnogalacturan_acety 99.2 4.8E-10 1E-14 101.3 13.5 130 171-364 66-196 (198)
19 cd04506 SGNH_hydrolase_YpmR_li 99.2 8.1E-10 1.8E-14 100.1 14.6 131 170-364 68-203 (204)
20 cd01825 SGNH_hydrolase_peri1 S 99.1 3.1E-10 6.7E-15 101.2 9.7 125 172-364 58-183 (189)
21 PRK10528 multifunctional acyl- 99.1 1.4E-09 3.1E-14 98.0 13.9 105 37-223 10-114 (191)
22 PF13472 Lipase_GDSL_2: GDSL-l 99.1 2.2E-09 4.8E-14 93.4 12.5 118 171-358 62-179 (179)
23 cd01841 NnaC_like NnaC (CMP-Ne 99.1 2.9E-09 6.2E-14 94.0 13.3 120 171-364 52-172 (174)
24 cd01822 Lysophospholipase_L1_l 99.1 3.6E-09 7.8E-14 93.3 13.9 46 171-227 65-110 (177)
25 cd01824 Phospholipase_B_like P 99.1 1.6E-08 3.5E-13 97.0 19.2 189 108-365 83-282 (288)
26 cd00229 SGNH_hydrolase SGNH_hy 99.0 5.1E-09 1.1E-13 90.5 13.9 121 170-364 65-186 (187)
27 cd01835 SGNH_hydrolase_like_3 99.0 7.8E-09 1.7E-13 92.8 15.1 123 170-364 69-191 (193)
28 cd01820 PAF_acetylesterase_lik 99.0 4.8E-09 1E-13 96.1 12.2 118 171-364 90-208 (214)
29 cd04502 SGNH_hydrolase_like_7 98.9 2.6E-08 5.7E-13 87.7 14.4 117 171-364 51-169 (171)
30 cd01831 Endoglucanase_E_like E 98.8 2.6E-07 5.6E-12 81.4 14.3 22 343-364 145-166 (169)
31 cd01828 sialate_O-acetylestera 98.7 1.2E-07 2.7E-12 83.1 11.1 117 171-364 49-166 (169)
32 cd01833 XynB_like SGNH_hydrola 98.6 2.3E-07 4.9E-12 80.4 10.6 116 170-365 40-156 (157)
33 cd01829 SGNH_hydrolase_peri2 S 98.5 5.3E-07 1.1E-11 81.2 10.4 134 172-364 61-196 (200)
34 KOG3035 Isoamyl acetate-hydrol 98.5 1.4E-06 3E-11 78.2 11.0 136 170-364 68-206 (245)
35 cd01826 acyloxyacyl_hydrolase_ 98.3 5.9E-06 1.3E-10 78.7 12.0 154 172-364 124-304 (305)
36 PF14606 Lipase_GDSL_3: GDSL-l 98.2 1.8E-05 3.9E-10 70.1 10.9 173 38-364 2-175 (178)
37 COG2755 TesA Lysophospholipase 98.2 5.1E-05 1.1E-09 69.2 14.0 23 343-365 185-207 (216)
38 cd01840 SGNH_hydrolase_yrhL_li 98.1 1.4E-05 3.1E-10 69.0 8.9 23 342-364 126-148 (150)
39 KOG3670 Phospholipase [Lipid t 97.7 0.00078 1.7E-08 66.0 14.0 89 109-225 149-237 (397)
40 COG2845 Uncharacterized protei 95.6 0.045 9.7E-07 52.5 7.6 135 171-364 178-315 (354)
41 cd01842 SGNH_hydrolase_like_5 93.2 2.1 4.5E-05 38.1 11.9 20 345-364 161-180 (183)
42 PF08885 GSCFA: GSCFA family; 90.2 1.6 3.5E-05 41.1 8.5 107 170-293 101-224 (251)
43 PLN02757 sirohydrochlorine fer 79.3 7.4 0.00016 33.8 6.8 64 206-297 60-126 (154)
44 COG3240 Phospholipase/lecithin 76.3 2.7 5.8E-05 41.5 3.4 69 169-237 97-165 (370)
45 PF02633 Creatininase: Creatin 64.5 31 0.00067 31.9 7.8 84 175-295 61-145 (237)
46 cd03416 CbiX_SirB_N Sirohydroc 63.7 16 0.00034 28.7 4.9 52 207-286 47-98 (101)
47 PF01903 CbiX: CbiX; InterPro 58.6 8.5 0.00018 30.5 2.5 53 207-287 40-92 (105)
48 cd00384 ALAD_PBGS Porphobilino 48.4 55 0.0012 31.7 6.5 64 201-287 48-111 (314)
49 PRK13384 delta-aminolevulinic 47.3 55 0.0012 31.8 6.3 64 201-287 58-121 (322)
50 cd04824 eu_ALAD_PBGS_cysteine_ 44.6 64 0.0014 31.3 6.3 28 201-228 48-75 (320)
51 PRK09283 delta-aminolevulinic 44.3 64 0.0014 31.4 6.3 64 201-287 56-119 (323)
52 cd03414 CbiX_SirB_C Sirohydroc 44.1 72 0.0016 25.6 5.9 50 206-285 47-96 (117)
53 PF04914 DltD_C: DltD C-termin 43.7 58 0.0013 27.4 5.3 72 266-363 38-124 (130)
54 PF00490 ALAD: Delta-aminolevu 43.4 65 0.0014 31.4 6.2 64 203-287 56-119 (324)
55 cd04823 ALAD_PBGS_aspartate_ri 43.4 65 0.0014 31.3 6.1 28 201-228 51-78 (320)
56 cd03412 CbiK_N Anaerobic cobal 40.5 96 0.0021 25.7 6.2 52 203-285 55-106 (127)
57 PF08029 HisG_C: HisG, C-termi 34.2 27 0.00058 26.4 1.7 20 207-226 53-72 (75)
58 PRK13660 hypothetical protein; 33.0 2E+02 0.0042 25.7 7.2 27 199-225 24-50 (182)
59 TIGR03455 HisG_C-term ATP phos 32.1 49 0.0011 26.4 3.0 22 205-226 75-96 (100)
60 COG0113 HemB Delta-aminolevuli 31.6 77 0.0017 30.6 4.6 28 201-228 58-85 (330)
61 PF06908 DUF1273: Protein of u 30.9 94 0.002 27.6 4.8 27 199-225 24-50 (177)
62 PRK01844 hypothetical protein; 28.8 39 0.00084 25.3 1.7 19 6-24 1-19 (72)
63 PF08139 LPAM_1: Prokaryotic m 22.8 94 0.002 18.3 2.2 22 1-23 1-23 (25)
64 cd04236 AAK_NAGS-Urea AAK_NAGS 22.0 3.4E+02 0.0074 25.8 7.2 45 170-228 34-78 (271)
65 PF02896 PEP-utilizers_C: PEP- 21.5 1.3E+02 0.0028 29.0 4.3 16 172-187 197-212 (293)
66 cd00419 Ferrochelatase_C Ferro 21.4 2.3E+02 0.005 23.7 5.3 19 207-225 80-98 (135)
67 PRK13717 conjugal transfer pro 20.9 1.6E+02 0.0035 24.6 4.1 26 252-277 70-95 (128)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=5.8e-73 Score=555.14 Aligned_cols=329 Identities=27% Similarity=0.481 Sum_probs=274.9
Q ss_pred chhHHHHHHHHHHHHhccchhhhcCCCCCCCCCCEEEEcCCcccccCCCCc---CCCCCCCCCCCCCCC-CCccccCCCc
Q 016732 5 DIRLFYAYLLPIFAFMGGPMATMGGASLKGCGFPAVYNFGDSNSDTGGISA---AMTQVPPPNGESFFG-HPSGRFCDGR 80 (384)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~---~~~~~~~Pyg~~~~~-~p~GRfSnG~ 80 (384)
.|.+|....|-+++++....+. ..++++|||||||++|+||+.. ..+++.||||++|++ +|+||||||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr 74 (351)
T PLN03156 2 QMHLFLIFFLLLAQLLVLVAET-------CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGR 74 (351)
T ss_pred CcchhhHHHHHHHHHHHHHhcc-------cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCC
Confidence 4778887766666666554222 1338999999999999999642 336789999999985 7999999999
Q ss_pred hHHHHHHhhccC-CCCCCccCc--CCCccCCCcceeecCccccCCCC---cccchHHHHHHHHHHHHHHHHhhcCCCCCC
Q 016732 81 LIIDLIAEKVKL-PYLSPYLDS--VGTNFRNGANFATGGSSIRPGGF---SPFHLGIQISQFIQFKSRTSAVYNQLSPNR 154 (384)
Q Consensus 81 ~w~d~la~~lg~-~~~ppyl~~--~~~~~~~G~NyA~gGA~~~~~~~---~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~ 154 (384)
+|+||||+.||+ |.+|||++. .+.++.+|+|||+|||++.+.+. ..++|..||++|.++++++....|..
T Consensus 75 ~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~---- 150 (351)
T PLN03156 75 IAPDFISEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEE---- 150 (351)
T ss_pred hhhhhHHHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChH----
Confidence 999999999999 889999974 34678999999999999887652 35689999999999887776544421
Q ss_pred CCCCCCCCCCccccCCCceEEEEeccchhhhccc--C-C-CHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCC
Q 016732 155 TTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQ--H-T-NEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIG 230 (384)
Q Consensus 155 ~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~--~-~-~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg 230 (384)
.+.+..+++||+||||+|||...+. . . ....++++++.+++.+.+.|++||++|||||+|+|+||+|
T Consensus 151 ---------~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplG 221 (351)
T PLN03156 151 ---------KANEIISEALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMG 221 (351)
T ss_pred ---------HHHHHHhcCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccc
Confidence 0223468999999999999985442 1 1 1124568899999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccc
Q 016732 231 CLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFC 310 (384)
Q Consensus 231 ~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~C 310 (384)
|+|..+.... .+..+|.+.+|++++.||++|++++++|++++|+++|+++|+|+++.++++||++|||++++++|
T Consensus 222 c~P~~~~~~~-----~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aC 296 (351)
T PLN03156 222 CLPLERTTNL-----MGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVAC 296 (351)
T ss_pred cCHHHHhhcC-----CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccc
Confidence 9998765421 13457999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-cCCccccCCCcccCCccccCCCCCCCCceecCCCChhHHHHHHHHHHHHcC
Q 016732 311 CGSF-YGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 311 c~~~-~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
|+.+ ++....|++. ....|++|++|+|||++|||+++|+++|+.++++
T Consensus 297 Cg~g~~~~~~~C~~~-------~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~ 345 (351)
T PLN03156 297 CATGMFEMGYLCNRN-------NPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKT 345 (351)
T ss_pred cCCCCCCCccccCCC-------CCCccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence 9976 7777889862 2358999999999999999999999999999875
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.2e-70 Score=531.66 Aligned_cols=304 Identities=38% Similarity=0.649 Sum_probs=260.2
Q ss_pred CEEEEcCCcccccCCCCcCC---CCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCC-CCCccCcC-CCccCCCcce
Q 016732 38 PAVYNFGDSNSDTGGISAAM---TQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPY-LSPYLDSV-GTNFRNGANF 112 (384)
Q Consensus 38 ~~l~vFGDSlsD~Gn~~~~~---~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~-~ppyl~~~-~~~~~~G~Ny 112 (384)
++|||||||++|+||+.... +++.||||++|+++|+||||||++|+||||+.||++. .|||+... +.++.+|+||
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~Nf 80 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGVNF 80 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCCCCccccCCchhhhhhhhhccCCCCCCCccCccccchhhcccee
Confidence 47999999999999986432 3679999999998999999999999999999999997 67777643 2467889999
Q ss_pred eecCccccCCCC---cccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccC
Q 016732 113 ATGGSSIRPGGF---SPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQH 189 (384)
Q Consensus 113 A~gGA~~~~~~~---~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~ 189 (384)
|+|||++.+.+. .+++|..||++|+++++++....|.. .+.+..+++||+||||+|||...+..
T Consensus 81 A~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~-------------~~~~~~~~sL~~i~iG~ND~~~~~~~ 147 (315)
T cd01837 81 ASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEE-------------AAADILSKSLFLISIGSNDYLNNYFA 147 (315)
T ss_pred cccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHH-------------HHHHHHhCCEEEEEecccccHHHHhc
Confidence 999999988763 46899999999999887765544421 02345689999999999999976532
Q ss_pred CC--HHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 016732 190 TN--EEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLK 267 (384)
Q Consensus 190 ~~--~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~ 267 (384)
.. ..+..++++.+++++.++|++||++|||+|+|+|+||+||+|.++.... .+..+|.+.+|++++.||++|+
T Consensus 148 ~~~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~-----~~~~~c~~~~n~~~~~~N~~L~ 222 (315)
T cd01837 148 NPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFG-----GDGGGCLEELNELARLFNAKLK 222 (315)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcC-----CCCCCcCHHHHHHHHHHHHHHH
Confidence 21 2345788999999999999999999999999999999999999876532 1346899999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccc-cCCccccCCCcccCCccccCCCCCCCCceecC
Q 016732 268 DKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSF-YGYHIDCGKKATVNGTVYGNPCHHPSKYISWD 346 (384)
Q Consensus 268 ~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~-~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD 346 (384)
++|++|++++|+++|+++|+|.+++++++||++|||+++.++||+.+ .+....|... ....|.+|++|+|||
T Consensus 223 ~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~-------~~~~C~~p~~y~fwD 295 (315)
T cd01837 223 KLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPC-------GSTVCPDPSKYVFWD 295 (315)
T ss_pred HHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCC-------CCCcCCCccceEEeC
Confidence 99999999999999999999999999999999999999999999975 5556677652 256899999999999
Q ss_pred CCChhHHHHHHHHHHHHcCC
Q 016732 347 GIHYSQAANLWVANRILNGS 366 (384)
Q Consensus 347 ~~HPT~~~h~~iA~~~~~~~ 366 (384)
++|||+++|++||+.+++|.
T Consensus 296 ~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 296 GVHPTEAANRIIADALLSGP 315 (315)
T ss_pred CCChHHHHHHHHHHHHhcCC
Confidence 99999999999999999863
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=9.5e-60 Score=450.12 Aligned_cols=268 Identities=22% Similarity=0.269 Sum_probs=222.0
Q ss_pred CCEEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecC
Q 016732 37 FPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGG 116 (384)
Q Consensus 37 ~~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gG 116 (384)
|++|||||||++|+||+.... + +.+|+||||||++++|++++.+|++.. ++..+.+..+|+|||+||
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~-----~-----~~~~~gRFsnG~~~~d~~~~~~~~~~~---~~~~~~~~~~G~NfA~gG 67 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG-----V-----GAAGGGRFTVNDGSIWSLGVAEGYGLT---TGTATPTTPGGTNYAQGG 67 (281)
T ss_pred CCceEEecCcccccCCCCccc-----c-----CCCCCcceecCCcchHHHHHHHHcCCC---cCcCcccCCCCceeeccC
Confidence 578999999999999985432 1 135699999999999999999998754 222245667899999999
Q ss_pred ccccCCCC------cccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCC
Q 016732 117 SSIRPGGF------SPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHT 190 (384)
Q Consensus 117 A~~~~~~~------~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~ 190 (384)
|++.+.+. ..++|.+||++|++.+. ...+++||+||||+|||...+.+.
T Consensus 68 a~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~-------------------------~~~~~sL~~i~iG~ND~~~~~~~~ 122 (281)
T cd01847 68 ARVGDTNNGNGAGAVLPSVTTQIANYLAAGG-------------------------GFDPNALYTVWIGGNDLIAALAAL 122 (281)
T ss_pred ccccCCCCccccccCCCCHHHHHHHHHHhcC-------------------------CCCCCeEEEEecChhHHHHHHhhc
Confidence 99987552 35799999999986431 125799999999999999765321
Q ss_pred C-----HHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHH
Q 016732 191 N-----EEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQ 265 (384)
Q Consensus 191 ~-----~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~ 265 (384)
. ..+..++++.+++++.+++++|+++|||+|+|+++||+||+|.++... ..|.+.++++++.||++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---------~~~~~~~n~~~~~~N~~ 193 (281)
T cd01847 123 TTATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---------AAAAALASALSQTYNQT 193 (281)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---------chhHHHHHHHHHHHHHH
Confidence 1 234578899999999999999999999999999999999999987542 25888999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceec
Q 016732 266 LKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISW 345 (384)
Q Consensus 266 L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfw 345 (384)
|+.+|++|+++ +|+++|+|.+++++++||++|||++++++||+.. ....|+.. ....|.+|++|+||
T Consensus 194 L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~--~~~~~~~~-------~~~~c~~~~~y~fw 260 (281)
T cd01847 194 LQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTST--SAAGSGAA-------TLVTAAAQSTYLFA 260 (281)
T ss_pred HHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCC--Cccccccc-------cccCCCCccceeec
Confidence 99999998754 8999999999999999999999999999999853 11225431 23579999999999
Q ss_pred CCCChhHHHHHHHHHHHHc
Q 016732 346 DGIHYSQAANLWVANRILN 364 (384)
Q Consensus 346 D~~HPT~~~h~~iA~~~~~ 364 (384)
|++||||++|++||+++++
T Consensus 261 D~~HpTe~~~~~ia~~~~~ 279 (281)
T cd01847 261 DDVHPTPAGHKLIAQYALS 279 (281)
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999886
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1.1e-57 Score=450.15 Aligned_cols=253 Identities=19% Similarity=0.225 Sum_probs=212.9
Q ss_pred CCCCCEEEEcCCcccccCCCC-cCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcce
Q 016732 34 GCGFPAVYNFGDSNSDTGGIS-AAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANF 112 (384)
Q Consensus 34 ~~~~~~l~vFGDSlsD~Gn~~-~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~Ny 112 (384)
...+++|||||||+||+||+. ..+....||||.+| +||||||++|+|||| .|||+. ..|+||
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~~~~PPyG~~f----tGRFSNG~v~~DfLA-------~~pyl~------~~G~NF 201 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTHHILPSYGQYF----GGRFTNGFTWTEFLS-------SPHFLG------KEMLNF 201 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccccCCCCCCCCC----CcccCCCchhhheec-------cccccC------CCCceE
Confidence 356999999999999997753 22235689999987 799999999999999 456764 268999
Q ss_pred eecCccccCCC------CcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhc
Q 016732 113 ATGGSSIRPGG------FSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYG 186 (384)
Q Consensus 113 A~gGA~~~~~~------~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~ 186 (384)
|+|||++.... ...++|..||++|+. .+++||+||+|+|||..
T Consensus 202 A~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~------------------------------~~~aL~lV~iG~NDy~~- 250 (408)
T PRK15381 202 AEGGSTSASYSCFNCIGDFVSNTDRQVASYTP------------------------------SHQDLAIFLLGANDYMT- 250 (408)
T ss_pred eecccccccccccccccCccCCHHHHHHHHHh------------------------------cCCcEEEEEeccchHHH-
Confidence 99999997431 113689999998642 15799999999999983
Q ss_pred ccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHH
Q 016732 187 FQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQL 266 (384)
Q Consensus 187 ~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L 266 (384)
+ ..++++.+++++.++|++||++|||+|+|+|+||+||+|..+.. ...+.+|++++.||++|
T Consensus 251 ~-------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----------~~~~~~N~~a~~fN~~L 312 (408)
T PRK15381 251 L-------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----------DEKRKLKDESIAHNALL 312 (408)
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----------CchHHHHHHHHHHHHHH
Confidence 2 23467889999999999999999999999999999999987632 12478999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccc-cCCccccCCCcccCCccccCCCCCCCCceec
Q 016732 267 KDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSF-YGYHIDCGKKATVNGTVYGNPCHHPSKYISW 345 (384)
Q Consensus 267 ~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~-~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfw 345 (384)
+++|++|++++|+++|+++|+|+++.++++||++|||++++. ||+.+ ++....|.+ ....|. +|+||
T Consensus 313 ~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p--------~~~~C~---~YvFW 380 (408)
T PRK15381 313 KTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDP--------QLDICP---QYVFN 380 (408)
T ss_pred HHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCccCCccccCc--------ccCCCC---ceEec
Confidence 999999999999999999999999999999999999999887 99875 555567766 255784 99999
Q ss_pred CCCChhHHHHHHHHHHHHc
Q 016732 346 DGIHYSQAANLWVANRILN 364 (384)
Q Consensus 346 D~~HPT~~~h~~iA~~~~~ 364 (384)
|.+|||+++|+++|+.+.+
T Consensus 381 D~vHPTe~ah~iiA~~~~~ 399 (408)
T PRK15381 381 DLVHPTQEVHHCFAIMLES 399 (408)
T ss_pred CCCCChHHHHHHHHHHHHH
Confidence 9999999999999998753
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=2.9e-54 Score=409.40 Aligned_cols=264 Identities=23% Similarity=0.374 Sum_probs=219.3
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
+||||||||||+||.........+|.+.. .|+||||||++|+|+||+.+|++. ...|+|||+|||+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~~~~~~~~~---~~~grfsnG~~w~d~la~~lg~~~-----------~~~~~N~A~~Ga~ 66 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGGSNPPPSPP---YFGGRFSNGPVWVEYLAATLGLSG-----------LKQGYNYAVGGAT 66 (270)
T ss_pred CeEEeeCccccCCcchhhcCCCCCCCCCC---CCCCccCCchhHHHHHHHHhCCCc-----------cCCcceeEecccc
Confidence 58999999999999754322112333322 358999999999999999999753 1467999999999
Q ss_pred ccCCC-----CcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHH
Q 016732 119 IRPGG-----FSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEE 193 (384)
Q Consensus 119 ~~~~~-----~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~ 193 (384)
+.... ....++..||++|++..+. +..+++|++||+|+||+...+.. .+
T Consensus 67 ~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~------------------------~~~~~~l~~i~~G~ND~~~~~~~--~~ 120 (270)
T cd01846 67 AGAYNVPPYPPTLPGLSDQVAAFLAAHKL------------------------RLPPDTLVAIWIGANDLLNALDL--PQ 120 (270)
T ss_pred cCCcccCCCCCCCCCHHHHHHHHHHhccC------------------------CCCCCcEEEEEeccchhhhhccc--cc
Confidence 98753 2356999999999875421 23478999999999999976432 12
Q ss_pred HHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHH
Q 016732 194 QVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQL 273 (384)
Q Consensus 194 ~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l 273 (384)
.....++.+++++.++|++|+++|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|
T Consensus 121 ~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~---------~~~~~~~~~~~~N~~L~~~l~~l 191 (270)
T cd01846 121 NPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA---------VAARATALTAAYNAKLAEKLAEL 191 (270)
T ss_pred cccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc---------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 234678899999999999999999999999999999999998865321 12689999999999999999999
Q ss_pred HhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhHH
Q 016732 274 RLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQA 353 (384)
Q Consensus 274 ~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~ 353 (384)
++++|+++|+++|+|.+++++++||++|||+++..+||+.. .|.. ....|.+|++|+|||++|||++
T Consensus 192 ~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~-----~~~~--------~~~~c~~~~~y~fwD~~HpT~~ 258 (270)
T cd01846 192 KAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDYV-----YSYS--------PREACANPDKYLFWDEVHPTTA 258 (270)
T ss_pred HHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCCC-----cccc--------ccCCCCCccceEEecCCCccHH
Confidence 99999999999999999999999999999999999999841 1544 3578999999999999999999
Q ss_pred HHHHHHHHHHc
Q 016732 354 ANLWVANRILN 364 (384)
Q Consensus 354 ~h~~iA~~~~~ 364 (384)
+|++||+++++
T Consensus 259 ~~~~iA~~~~~ 269 (270)
T cd01846 259 VHQLIAEEVAA 269 (270)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=6.4e-39 Score=305.37 Aligned_cols=293 Identities=21% Similarity=0.278 Sum_probs=211.0
Q ss_pred CCCCCCEEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCC--CchHHHHHHhhccC-CCCCCcc----CcCCCc
Q 016732 33 KGCGFPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCD--GRLIIDLIAEKVKL-PYLSPYL----DSVGTN 105 (384)
Q Consensus 33 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSn--G~~w~d~la~~lg~-~~~ppyl----~~~~~~ 105 (384)
+.++|++++||||||||+|+........-.| ..|-..+..++++ |.+|+++.+..+|. ...+.++ +..+..
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~~~~~--~~~~~~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~~~~~~ 102 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGHHGDP--GSYGTIPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAADPNGLY 102 (370)
T ss_pred cccccceEEEeccchhhcccccCcccccCCc--cccccccCCcccCCCceeeeccchhhhccccccccccccccCccccc
Confidence 3467999999999999999976433211111 1121223344554 67888999988882 1111111 122333
Q ss_pred c--CCCcceeecCccccCCC------CcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEE
Q 016732 106 F--RNGANFATGGSSIRPGG------FSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFD 177 (384)
Q Consensus 106 ~--~~G~NyA~gGA~~~~~~------~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~ 177 (384)
. ..|.|||+|||++.... ....++.+|+.+|+...... .+. ...|........|+.+|
T Consensus 103 ~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~------------~~~~~~~l~p~~l~~~~ 168 (370)
T COG3240 103 IHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVW------------PNYPAQGLDPSALYFLW 168 (370)
T ss_pred CcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--ccc------------ccccccccCHHHHHHHh
Confidence 3 58999999999987654 34569999999998754321 000 11223334578899999
Q ss_pred eccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhH
Q 016732 178 IGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNE 257 (384)
Q Consensus 178 iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~ 257 (384)
.|+|||+..-.. .....+.+.......+...|++|.++|||+|+|+++|+++.+|....... -.+.+.+
T Consensus 169 ggand~~~~~~~-~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~----------~~~~a~~ 237 (370)
T COG3240 169 GGANDYLALPML-KAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT----------EAIQASQ 237 (370)
T ss_pred hcchhhhccccc-chhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc----------hHHHHHH
Confidence 999999875211 11222334444467789999999999999999999999999999875421 2237889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCC
Q 016732 258 MAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCH 337 (384)
Q Consensus 258 ~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~ 337 (384)
++..||..|...|++++ .+|+.+|++.+|++++.||++|||.|++..||..... ...|.+. ....|.
T Consensus 238 ~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~-~~~~~a~-------~p~~~~ 304 (370)
T COG3240 238 ATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVS-NPACSAS-------LPALCA 304 (370)
T ss_pred HHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccC-Ccccccc-------cccccC
Confidence 99999999999999874 7999999999999999999999999999999986411 1266653 123456
Q ss_pred CCCCceecCCCChhHHHHHHHHHHHHcC
Q 016732 338 HPSKYISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 338 ~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
.|++|+|||.+|||+++|++||++++..
T Consensus 305 ~~~~ylFaD~vHPTt~~H~liAeyila~ 332 (370)
T COG3240 305 APQKYLFADSVHPTTAVHHLIAEYILAR 332 (370)
T ss_pred CccceeeecccCCchHHHHHHHHHHHHH
Confidence 6778999999999999999999999864
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.94 E-value=7.1e-27 Score=214.47 Aligned_cols=222 Identities=27% Similarity=0.414 Sum_probs=157.9
Q ss_pred EEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCccc
Q 016732 40 VYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSI 119 (384)
Q Consensus 40 l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~~ 119 (384)
|++||||++|. +|+++|..|.+.++..+.-... ... ...-..+.|+|.+|+++
T Consensus 1 i~~fGDS~td~-----------------------~~~~~~~~~~~~~~~~l~~~~~---~~~-~~~~~~~~n~a~~G~~~ 53 (234)
T PF00657_consen 1 IVVFGDSLTDG-----------------------GGDSNGGGWPEGLANNLSSCLG---ANQ-RNSGVDVSNYAISGATS 53 (234)
T ss_dssp EEEEESHHHHT-----------------------TTSSTTCTHHHHHHHHCHHCCH---HHH-HCTTEEEEEEE-TT--C
T ss_pred CEEEeehhccc-----------------------CCCCCCcchhhhHHHHHhhccc---ccc-CCCCCCeeccccCCCcc
Confidence 68999999998 3567899999999988732110 000 00112357999999997
Q ss_pred cCCC----CcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHH
Q 016732 120 RPGG----FSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQV 195 (384)
Q Consensus 120 ~~~~----~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~ 195 (384)
.... .....+..|+....... ...+.+|++||+|+||+..... ....
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~lv~i~~G~ND~~~~~~---~~~~ 104 (234)
T PF00657_consen 54 DGDLYNLWAQVQNISQQISRLLDSK--------------------------SFYDPDLVVIWIGTNDYFNNRD---SSDN 104 (234)
T ss_dssp C-HGGCCCCTCHHHHHHHHHHHHHH--------------------------HHHTTSEEEEE-SHHHHSSCCS---CSTT
T ss_pred ccccchhhHHHHHHHHHhhcccccc--------------------------ccCCcceEEEecccCcchhhcc---cchh
Confidence 5322 11112333333322111 1236789999999999974211 1122
Q ss_pred HhhHHHHHHhhhHHHHHHHHhCCc-----eEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHH
Q 016732 196 RASIPDILSQFSKAVHQLYKEGAR-----FFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKV 270 (384)
Q Consensus 196 ~~~v~~vv~~i~~~i~~L~~~GAr-----~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l 270 (384)
...++.+++++.+.|++|++.|+| +++++++||++|.|....... ....|.+.+++++..||+.|++.+
T Consensus 105 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~l~~~~ 178 (234)
T PF00657_consen 105 NTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK------DSASCIERLNAIVAAFNSALREVA 178 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT------TTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc------cccccchhhHHHHHHHHHHHHHHh
Confidence 455678899999999999999999 999999999998888765432 235799999999999999999999
Q ss_pred HHHHhcCC-CCeEEEecchHHHHHH--HHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCC
Q 016732 271 SQLRLQLP-YGAFTYVDVYSVKYAL--ISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDG 347 (384)
Q Consensus 271 ~~l~~~~~-g~~i~~~D~~~~~~~i--i~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~ 347 (384)
+++++.++ +.+|.++|+++.+.+. ..+|.. ++|+|||.
T Consensus 179 ~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~---------------------------------------~~~~~~D~ 219 (234)
T PF00657_consen 179 AQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN---------------------------------------DKYMFWDG 219 (234)
T ss_dssp HHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH---------------------------------------HHCBBSSS
T ss_pred hhcccccccCCceEEEEHHHHHHHhhhccCccc---------------------------------------ceeccCCC
Confidence 99988775 7899999999999998 666543 36899999
Q ss_pred CChhHHHHHHHHHHH
Q 016732 348 IHYSQAANLWVANRI 362 (384)
Q Consensus 348 ~HPT~~~h~~iA~~~ 362 (384)
+|||+++|++||+++
T Consensus 220 ~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 220 VHPTEKGHKIIAEYI 234 (234)
T ss_dssp SSB-HHHHHHHHHHH
T ss_pred cCCCHHHHHHHHcCC
Confidence 999999999999985
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.40 E-value=4e-12 Score=115.77 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=114.9
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
.|+.||||++. |-.. -+ .++++.+..|+..|++.|+-.. +. ..-+|.+++|.+
T Consensus 1 ~I~~~GDSiT~-G~~~---------~~-------~~~~~~~~~w~~~L~~~l~~~~-~~---------~~viN~Gv~G~t 53 (208)
T cd01839 1 TILCFGDSNTW-GIIP---------DT-------GGRYPFEDRWPGVLEKALGANG-EN---------VRVIEDGLPGRT 53 (208)
T ss_pred CEEEEecCccc-CCCC---------CC-------CCcCCcCCCCHHHHHHHHccCC-CC---------eEEEecCcCCcc
Confidence 47899999973 3211 00 1355667899999999986442 11 123799999988
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHHhh
Q 016732 119 IRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVRAS 198 (384)
Q Consensus 119 ~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~ 198 (384)
+.... .......-++.+...... ...-++++|++|+||+...+ ..+.
T Consensus 54 t~~~~-~~~~~~~~l~~l~~~l~~-------------------------~~~pd~vii~lGtND~~~~~-~~~~------ 100 (208)
T cd01839 54 TVLDD-PFFPGRNGLTYLPQALES-------------------------HSPLDLVIIMLGTNDLKSYF-NLSA------ 100 (208)
T ss_pred eeccC-ccccCcchHHHHHHHHHh-------------------------CCCCCEEEEecccccccccc-CCCH------
Confidence 75321 001111122222221111 01347899999999987532 2222
Q ss_pred HHHHHHhhhHHHHHHHHh------CCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHH
Q 016732 199 IPDILSQFSKAVHQLYKE------GARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQ 272 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~------GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~ 272 (384)
+...+++.+.++.+.+. +..+|+++..||+...+... ..+....+...+.||+.+++..++
T Consensus 101 -~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~a~~ 167 (208)
T cd01839 101 -AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL------------AGKFAGAEEKSKGLADAYRALAEE 167 (208)
T ss_pred -HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch------------hhhhccHHHHHHHHHHHHHHHHHH
Confidence 23444555555555554 45678888888862111100 112233456677788777776554
Q ss_pred HHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhH
Q 016732 273 LRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQ 352 (384)
Q Consensus 273 l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~ 352 (384)
. ++.++|.+.++. . ...|++|||+
T Consensus 168 ~-------~~~~iD~~~~~~---------------------------------------------~----~~~DGvH~~~ 191 (208)
T cd01839 168 L-------GCHFFDAGSVGS---------------------------------------------T----SPVDGVHLDA 191 (208)
T ss_pred h-------CCCEEcHHHHhc---------------------------------------------c----CCCCccCcCH
Confidence 3 466788754321 0 2379999999
Q ss_pred HHHHHHHHHHHc
Q 016732 353 AANLWVANRILN 364 (384)
Q Consensus 353 ~~h~~iA~~~~~ 364 (384)
++|++||+.+++
T Consensus 192 ~G~~~~a~~l~~ 203 (208)
T cd01839 192 DQHAALGQALAS 203 (208)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 9
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=99.34 E-value=2.2e-11 Score=108.46 Aligned_cols=183 Identities=19% Similarity=0.139 Sum_probs=111.7
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
+|++||||+++ |... ++....+..|++.|++.+..+. +. ..-.|.+.+|++
T Consensus 1 ~i~~~GDSit~-G~~~------------------~~~~~~~~~~~~~l~~~l~~~~-~~---------~~~~N~g~~G~~ 51 (185)
T cd01832 1 RYVALGDSITE-GVGD------------------PVPDGGYRGWADRLAAALAAAD-PG---------IEYANLAVRGRR 51 (185)
T ss_pred CeeEecchhhc-ccCC------------------CCCCCccccHHHHHHHHhcccC-CC---------ceEeeccCCcch
Confidence 48899999987 3321 0112246799999999985421 00 123699999998
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHHhh
Q 016732 119 IRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVRAS 198 (384)
Q Consensus 119 ~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~ 198 (384)
+.. .+..|+... + . ..-.+++|.+|.||.... ..+
T Consensus 52 ~~~------~~~~~~~~~------~----~--------------------~~~d~vii~~G~ND~~~~--~~~------- 86 (185)
T cd01832 52 TAQ------ILAEQLPAA------L----A--------------------LRPDLVTLLAGGNDILRP--GTD------- 86 (185)
T ss_pred HHH------HHHHHHHHH------H----h--------------------cCCCEEEEeccccccccC--CCC-------
Confidence 632 122333211 1 0 133688999999998641 122
Q ss_pred HHHHHHhhhHHHHHHHHhCCceEEEcccCCC-CccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcC
Q 016732 199 IPDILSQFSKAVHQLYKEGARFFWIHNTGPI-GCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQL 277 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~GAr~~vV~~lppl-g~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 277 (384)
..+..+++...|+++...++ +|+++++||. +..|. ....+.....+|+.|++..++
T Consensus 87 ~~~~~~~~~~~i~~i~~~~~-~vil~~~~~~~~~~~~-----------------~~~~~~~~~~~n~~l~~~a~~----- 143 (185)
T cd01832 87 PDTYRADLEEAVRRLRAAGA-RVVVFTIPDPAVLEPF-----------------RRRVRARLAAYNAVIRAVAAR----- 143 (185)
T ss_pred HHHHHHHHHHHHHHHHhCCC-EEEEecCCCccccchh-----------------HHHHHHHHHHHHHHHHHHHHH-----
Confidence 23445566666677766676 4888888886 22111 112344567788877776553
Q ss_pred CCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhHHHHHH
Q 016732 278 PYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQAANLW 357 (384)
Q Consensus 278 ~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~ 357 (384)
.++.++|++..+. +. . .+++.-|++||+++||++
T Consensus 144 --~~v~~vd~~~~~~------------------~~-------------------------~-~~~~~~DgiHpn~~G~~~ 177 (185)
T cd01832 144 --YGAVHVDLWEHPE------------------FA-------------------------D-PRLWASDRLHPSAAGHAR 177 (185)
T ss_pred --cCCEEEecccCcc------------------cC-------------------------C-ccccccCCCCCChhHHHH
Confidence 2577888865421 00 1 123345999999999999
Q ss_pred HHHHHHc
Q 016732 358 VANRILN 364 (384)
Q Consensus 358 iA~~~~~ 364 (384)
||+.+++
T Consensus 178 ~A~~i~~ 184 (185)
T cd01832 178 LAALVLA 184 (185)
T ss_pred HHHHHhh
Confidence 9999875
No 10
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.30 E-value=8.5e-11 Score=104.64 Aligned_cols=122 Identities=19% Similarity=0.180 Sum_probs=78.1
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSG 250 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~ 250 (384)
-+++++.+|.||.... .+ ..+..+++.+.++.+.+.|++ ++++..+|....+...
T Consensus 60 ~d~v~i~~G~ND~~~~---~~-------~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~-------------- 114 (183)
T cd04501 60 PAVVIIMGGTNDIIVN---TS-------LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP-------------- 114 (183)
T ss_pred CCEEEEEeccCccccC---CC-------HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch--------------
Confidence 3788999999998642 22 224456666667777777875 5555666654322210
Q ss_pred CchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCc
Q 016732 251 CVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGT 330 (384)
Q Consensus 251 c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~ 330 (384)
+....+.....||+.+++..++ .++.++|.+..+.+.-.
T Consensus 115 ~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~---------------------------------- 153 (183)
T cd04501 115 QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN---------------------------------- 153 (183)
T ss_pred hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc----------------------------------
Confidence 1123345566788877766543 25788999987653110
Q ss_pred cccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 331 VYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 331 ~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.+....+..|++||+++||+++|+.+.+
T Consensus 154 ------~~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 154 ------VGLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred ------ccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 0112345679999999999999999875
No 11
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.30 E-value=3e-11 Score=108.36 Aligned_cols=120 Identities=21% Similarity=0.164 Sum_probs=77.8
Q ss_pred CCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHH-hCCceEEEcccCCCCccccccccccCCCCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYK-EGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQ 248 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~-~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~ 248 (384)
.-++++|.+|+||+... .+ .++..+++.+.++++.+ ....+|++.++||++..|.....
T Consensus 67 ~pd~Vii~~G~ND~~~~---~~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~~---------- 126 (191)
T cd01836 67 RFDVAVISIGVNDVTHL---TS-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQP---------- 126 (191)
T ss_pred CCCEEEEEecccCcCCC---CC-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcHH----------
Confidence 34789999999998642 22 23456666666777765 34567999999998765532111
Q ss_pred CCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccC
Q 016732 249 SGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVN 328 (384)
Q Consensus 249 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~ 328 (384)
....+++..+.+|+.+++..+ +++ .+.++|++..+.
T Consensus 127 --~~~~~~~~~~~~n~~~~~~a~----~~~--~~~~id~~~~~~------------------------------------ 162 (191)
T cd01836 127 --LRWLLGRRARLLNRALERLAS----EAP--RVTLLPATGPLF------------------------------------ 162 (191)
T ss_pred --HHHHHHHHHHHHHHHHHHHHh----cCC--CeEEEecCCccc------------------------------------
Confidence 112344555667766665544 332 566778754421
Q ss_pred CccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 329 GTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 329 g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
..++..|++||+++||+++|+.+.+
T Consensus 163 -----------~~~~~~DglHpn~~Gy~~~a~~l~~ 187 (191)
T cd01836 163 -----------PALFASDGFHPSAAGYAVWAEALAP 187 (191)
T ss_pred -----------hhhccCCCCCCChHHHHHHHHHHHH
Confidence 1234469999999999999999875
No 12
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=99.30 E-value=6e-11 Score=111.67 Aligned_cols=236 Identities=13% Similarity=0.064 Sum_probs=125.7
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
++++||||++---... ++... ......|. ...|++++++.|+... ..-.|+|.+|++
T Consensus 2 ~~v~iGDS~~~G~g~~--------~~~~~-~~~~c~rs--~~~y~~~la~~l~~~~------------~~~~n~a~sGa~ 58 (259)
T cd01823 2 RYVALGDSYAAGPGAG--------PLDDG-PDDGCRRS--SNSYPTLLARALGDET------------LSFTDVACSGAT 58 (259)
T ss_pred CEEEecchhhcCCCCC--------cccCC-CCCCCccC--CccHHHHHHHHcCCCC------------ceeeeeeecCcc
Confidence 5899999987533321 11000 11112333 4689999999988531 122699999999
Q ss_pred ccCCCCc-ccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhccc------C--
Q 016732 119 IRPGGFS-PFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQ------H-- 189 (384)
Q Consensus 119 ~~~~~~~-~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~------~-- 189 (384)
+.+.... ......|.. .+ ...-.+++|.||+||+..... .
T Consensus 59 ~~~~~~~~~~~~~~~~~-------~l------------------------~~~~dlV~i~iG~ND~~~~~~~~~~~~~~~ 107 (259)
T cd01823 59 TTDGIEPQQGGIAPQAG-------AL------------------------DPDTDLVTITIGGNDLGFADVVKACILTGG 107 (259)
T ss_pred cccccccccCCCchhhc-------cc------------------------CCCCCEEEEEECccccchHHHHHHHhhccC
Confidence 8754311 001111111 00 013588999999999865310 0
Q ss_pred ---------CCHHHHHhhHHHHHHhhhHHHHHHHHhC-CceEEEcccCCCCccccccccccCC--CCCCCCCCCchHHhH
Q 016732 190 ---------TNEEQVRASIPDILSQFSKAVHQLYKEG-ARFFWIHNTGPIGCLPYSVIYDKSK--PNNLDQSGCVKPQNE 257 (384)
Q Consensus 190 ---------~~~~~~~~~v~~vv~~i~~~i~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~--~~~~d~~~c~~~~n~ 257 (384)
..........+...+++.+.|++|.+.. -.+|+|++.|++--. -....... ....-.....+.+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (259)
T cd01823 108 GSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPP--DGGDCDKSCSPGTPLTPADRPELNQ 185 (259)
T ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccC--CCCCcccccccCCCCCHHHHHHHHH
Confidence 0011122335566677777777777543 346899998875210 00000000 000000012245666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCC
Q 016732 258 MAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCH 337 (384)
Q Consensus 258 ~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~ 337 (384)
..+.+|+.+++..++. ...++.++|++..|.. ...|.... .+. .-.
T Consensus 186 ~~~~ln~~i~~~a~~~----~~~~v~fvD~~~~f~~-------------~~~~~~~~-----~~~------------~~~ 231 (259)
T cd01823 186 LVDKLNALIRRAAADA----GDYKVRFVDTDAPFAG-------------HRACSPDP-----WSR------------SVL 231 (259)
T ss_pred HHHHHHHHHHHHHHHh----CCceEEEEECCCCcCC-------------CccccCCC-----ccc------------ccc
Confidence 7777777776665443 2356889999876542 11222110 000 000
Q ss_pred CCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 338 HPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 338 ~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+....+.-|++||+++||++||+.+.+
T Consensus 232 ~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 232 DLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 122335579999999999999999875
No 13
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.24 E-value=1.9e-10 Score=102.38 Aligned_cols=129 Identities=15% Similarity=0.204 Sum_probs=84.3
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHH-HhCCceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLY-KEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~-~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
-.+++|++|+||+...... ....++..+++.+.|+.|. .....+|++++.++....+...
T Consensus 62 ~d~v~l~~G~ND~~~~~~~------~~~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------------- 122 (191)
T cd01834 62 PDVVSIMFGINDSFRGFDD------PVGLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------------- 122 (191)
T ss_pred CCEEEEEeecchHhhcccc------cccHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC-------------
Confidence 4789999999999864210 0112355666677777775 3344567777765543221100
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
.-.+..+.....||+.|++..++ .++.++|+++.+.+....+
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------- 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------- 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC-------------------------------
Confidence 01245667778888888776543 2578999999987644321
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHcC
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
+..++++|++||+++||++||+.+.++
T Consensus 165 ---------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 ---------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred ---------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 124577999999999999999998763
No 14
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.23 E-value=1.3e-10 Score=105.71 Aligned_cols=56 Identities=9% Similarity=0.093 Sum_probs=37.2
Q ss_pred ceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCC
Q 016732 172 ALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIG 230 (384)
Q Consensus 172 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg 230 (384)
.+++|.+|+||......... .....++...+++...++++.+.|+ ++++.++||..
T Consensus 76 ~~vii~~G~ND~~~~~~~~~--~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVIILEGVNDIGASGTDFA--AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEEecccccccccccccc--cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 57889999999875421110 0112245667778888888888887 47777887753
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=99.20 E-value=3.1e-10 Score=101.72 Aligned_cols=131 Identities=17% Similarity=0.203 Sum_probs=80.0
Q ss_pred CCceEEEEeccchhhhcccC--CCHHHHHhhHHHHHHhhhHHHHHHHH--hCCceEEEcccCCCCccccccccccCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQH--TNEEQVRASIPDILSQFSKAVHQLYK--EGARFFWIHNTGPIGCLPYSVIYDKSKPNN 245 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~--~~~~~~~~~v~~vv~~i~~~i~~L~~--~GAr~~vV~~lpplg~~P~~~~~~~~~~~~ 245 (384)
.-.+++|++|+||....... .+ .+...+++...|+++.+ .++ ++++++.||.......... .
T Consensus 63 ~pd~vii~~G~ND~~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~-~----- 128 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQPQHVP-------LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSL-E----- 128 (199)
T ss_pred CceEEEEEecCccccCCCCCCccc-------HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhh-c-----
Confidence 46789999999999754211 11 23445555666666655 455 5778787775432211100 0
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCc
Q 016732 246 LDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKA 325 (384)
Q Consensus 246 ~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~ 325 (384)
.........++..+.||+.+++..++. .+.++|+++.+.. ++
T Consensus 129 -~~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~---~~--------------------------- 170 (199)
T cd01838 129 -DGGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQE---EA--------------------------- 170 (199)
T ss_pred -cccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHh---cc---------------------------
Confidence 000122345667788888777655432 4778899887653 10
Q ss_pred ccCCccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 326 TVNGTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 326 ~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+....++.|++||+++||+++|+.+++
T Consensus 171 ------------~~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 171 ------------GWLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred ------------CchhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 011235579999999999999999875
No 16
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.18 E-value=9.7e-10 Score=97.62 Aligned_cols=174 Identities=16% Similarity=0.174 Sum_probs=105.6
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
+|++||||++.-... -+-+..|+..+++.+++.. +|.+++|++
T Consensus 1 ~iv~~GDSit~G~g~----------------------~~~~~~~~~~~~~~~~~~v---------------~N~g~~G~~ 43 (177)
T cd01844 1 PWVFYGTSISQGACA----------------------SRPGMAWTAILARRLGLEV---------------INLGFSGNA 43 (177)
T ss_pred CEEEEeCchhcCcCC----------------------CCCCCcHHHHHHHHhCCCe---------------EEeeecccc
Confidence 488999998764321 1124589999999887543 699999986
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHHhh
Q 016732 119 IRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVRAS 198 (384)
Q Consensus 119 ~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~ 198 (384)
... ..+..+. .. ..-.+++|.+|+||....
T Consensus 44 ~~~---------~~~~~~~---~~--------------------------~~pd~vii~~G~ND~~~~------------ 73 (177)
T cd01844 44 RLE---------PEVAELL---RD--------------------------VPADLYIIDCGPNIVGAE------------ 73 (177)
T ss_pred cch---------HHHHHHH---Hh--------------------------cCCCEEEEEeccCCCccH------------
Confidence 421 1111111 10 133788999999996421
Q ss_pred HHHHHHhhhHHHHHHHHhCC-ceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcC
Q 016732 199 IPDILSQFSKAVHQLYKEGA-RFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQL 277 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 277 (384)
.+..+++.+.+++|.+... .+|++++.||. |...... ......++....+| +.+++++++
T Consensus 74 -~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~- 134 (177)
T cd01844 74 -AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELTP----------GRGKLTLAVRRALR----EAFEKLRAD- 134 (177)
T ss_pred -HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccCc----------chhHHHHHHHHHHH----HHHHHHHhc-
Confidence 1567778888888887764 46777777664 2211110 11223333344444 444444432
Q ss_pred CCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhHHHHHH
Q 016732 278 PYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQAANLW 357 (384)
Q Consensus 278 ~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~ 357 (384)
...++.++|.++++.. + .-++.|++|||++||++
T Consensus 135 ~~~~v~~id~~~~~~~--------------------------------------------~--~~~~~DglHpn~~Gy~~ 168 (177)
T cd01844 135 GVPNLYYLDGEELLGP--------------------------------------------D--GEALVDGIHPTDLGHMR 168 (177)
T ss_pred CCCCEEEecchhhcCC--------------------------------------------C--CCCCCCCCCCCHHHHHH
Confidence 2336888887544310 0 11457999999999999
Q ss_pred HHHHHHc
Q 016732 358 VANRILN 364 (384)
Q Consensus 358 iA~~~~~ 364 (384)
||+.+.+
T Consensus 169 ~a~~l~~ 175 (177)
T cd01844 169 YADRFEP 175 (177)
T ss_pred HHHHHhh
Confidence 9999875
No 17
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.18 E-value=6.4e-10 Score=99.32 Aligned_cols=183 Identities=14% Similarity=0.145 Sum_probs=104.9
Q ss_pred EEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCcc
Q 016732 39 AVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 118 (384)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA~ 118 (384)
+|+++|||++.-... + ...-|++.|++.++.+. .-.|++.+|.+
T Consensus 2 ~i~~~GDSit~G~~~--------------------~---~~~~~~~~l~~~l~~~~-------------~v~N~g~~G~t 45 (188)
T cd01827 2 KVACVGNSITEGAGL--------------------R---AYDSYPSPLAQMLGDGY-------------EVGNFGKSART 45 (188)
T ss_pred eEEEEecccccccCC--------------------C---CCCchHHHHHHHhCCCC-------------eEEeccCCcce
Confidence 588999999772211 0 13467888888876422 12599999998
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHHhh
Q 016732 119 IRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVRAS 198 (384)
Q Consensus 119 ~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~ 198 (384)
+......+.....|++ .... ..-++++|.+|+||..... ..+
T Consensus 46 ~~~~~~~~~~~~~~~~---~~~~---------------------------~~pd~Vii~~G~ND~~~~~-~~~------- 87 (188)
T cd01827 46 VLNKGDHPYMNEERYK---NALA---------------------------FNPNIVIIKLGTNDAKPQN-WKY------- 87 (188)
T ss_pred eecCCCcCccchHHHH---Hhhc---------------------------cCCCEEEEEcccCCCCCCC-Ccc-------
Confidence 7543211111222222 1100 1337899999999986431 111
Q ss_pred HHHHHHhhhHHHHHHHHhCC-ceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcC
Q 016732 199 IPDILSQFSKAVHQLYKEGA-RFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQL 277 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 277 (384)
.+...+++.+.|+.+.+.+. .+|++.+.||...... .. ...+...+.+|+.+++..+ +
T Consensus 88 ~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~---------------~~-~~~~~~~~~~~~~~~~~a~----~- 146 (188)
T cd01827 88 KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG---------------GF-INDNIIKKEIQPMIDKIAK----K- 146 (188)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC---------------Cc-cchHHHHHHHHHHHHHHHH----H-
Confidence 12334566666777666653 4677777666432110 00 0112344566666655543 3
Q ss_pred CCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhHHHHHH
Q 016732 278 PYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQAANLW 357 (384)
Q Consensus 278 ~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~ 357 (384)
..+.++|.+..+.. .+ .++-|++||++++|++
T Consensus 147 --~~~~~vD~~~~~~~--------------------------------------------~~--~~~~Dg~Hpn~~G~~~ 178 (188)
T cd01827 147 --LNLKLIDLHTPLKG--------------------------------------------KP--ELVPDWVHPNEKGAYI 178 (188)
T ss_pred --cCCcEEEccccccC--------------------------------------------Cc--cccCCCCCcCHHHHHH
Confidence 24667888654210 01 2346999999999999
Q ss_pred HHHHHHc
Q 016732 358 VANRILN 364 (384)
Q Consensus 358 iA~~~~~ 364 (384)
||+.+++
T Consensus 179 ~A~~i~~ 185 (188)
T cd01827 179 LAKVVYK 185 (188)
T ss_pred HHHHHHH
Confidence 9999875
No 18
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=99.17 E-value=4.8e-10 Score=101.26 Aligned_cols=130 Identities=11% Similarity=0.080 Sum_probs=80.2
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSG 250 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~ 250 (384)
-++++|.+|.||........ ..-+++..+++.+.|+++.+.|++ +++++.||.. + .. ...
T Consensus 66 pdlVii~~G~ND~~~~~~~~-----~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~--~-----~~-------~~~ 125 (198)
T cd01821 66 GDYVLIQFGHNDQKPKDPEY-----TEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRR--T-----FD-------EGG 125 (198)
T ss_pred CCEEEEECCCCCCCCCCCCC-----CCcHHHHHHHHHHHHHHHHHCCCe-EEEECCcccc--c-----cC-------CCC
Confidence 48899999999986532100 011345567777778888888886 4455544421 1 10 000
Q ss_pred CchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCc
Q 016732 251 CVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGT 330 (384)
Q Consensus 251 c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~ 330 (384)
..+.....||+.+++..++. .+.++|++..+.+..+.-.. . +
T Consensus 126 ---~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~---~-------~------------------ 167 (198)
T cd01821 126 ---KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGP---E-------K------------------ 167 (198)
T ss_pred ---cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhCh---H-------h------------------
Confidence 12233466787777766543 57789999998876653100 0 0
Q ss_pred cccCCCCCCC-CceecCCCChhHHHHHHHHHHHHc
Q 016732 331 VYGNPCHHPS-KYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 331 ~~~~~C~~p~-~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
..+. .++..|++||+++||++||+.+++
T Consensus 168 ------~~~~~~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 168 ------SKKYFPEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred ------HHhhCcCCCCCCCCCCHHHHHHHHHHHHh
Confidence 0000 245679999999999999999875
No 19
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=99.16 E-value=8.1e-10 Score=100.12 Aligned_cols=131 Identities=15% Similarity=0.240 Sum_probs=84.2
Q ss_pred CCceEEEEeccchhhhcccC-C---CHHHHHhhHHHHHHhhhHHHHHHHHhCCc-eEEEcccCCCCccccccccccCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQH-T---NEEQVRASIPDILSQFSKAVHQLYKEGAR-FFWIHNTGPIGCLPYSVIYDKSKPN 244 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~-~---~~~~~~~~v~~vv~~i~~~i~~L~~~GAr-~~vV~~lpplg~~P~~~~~~~~~~~ 244 (384)
.-.+++|.+|+||+...... . ........++...+++.+.|+++.+.+.+ +|+|+++++ |..... +
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~-~---- 138 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF-P---- 138 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc-c----
Confidence 34789999999999764311 1 12233334556777888888888877643 577777531 211110 0
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCC
Q 016732 245 NLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKK 324 (384)
Q Consensus 245 ~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~ 324 (384)
-...+++.++.||+.+++..++. .++.++|+++.+..-
T Consensus 139 ------~~~~~~~~~~~~n~~~~~~a~~~------~~v~~vd~~~~~~~~------------------------------ 176 (204)
T cd04506 139 ------NITEINDIVNDWNEASQKLASQY------KNAYFVPIFDLFSDG------------------------------ 176 (204)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHhC------CCeEEEehHHhhcCC------------------------------
Confidence 01245678888998877765421 248899998765420
Q ss_pred cccCCccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 325 ATVNGTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 325 ~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+ +..++..|++||++++|++||+.+++
T Consensus 177 -----------~--~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 177 -----------Q--NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred -----------c--ccccccccCcCCCHHHHHHHHHHHHh
Confidence 0 12345679999999999999999875
No 20
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.12 E-value=3.1e-10 Score=101.17 Aligned_cols=125 Identities=10% Similarity=0.003 Sum_probs=75.2
Q ss_pred ceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHh-CCceEEEcccCCCCccccccccccCCCCCCCCCC
Q 016732 172 ALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKE-GARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSG 250 (384)
Q Consensus 172 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~ 250 (384)
++++|.+|+||.... ..+ .+...+++.+.|+++.+. ...+|++++.||....+..
T Consensus 58 d~Vii~~G~ND~~~~--~~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~--------------- 113 (189)
T cd01825 58 DLVILSYGTNEAFNK--QLN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA--------------- 113 (189)
T ss_pred CEEEEECCCcccccC--CCC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC---------------
Confidence 688999999997542 122 235566677777777764 4556888887764322210
Q ss_pred CchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCc
Q 016732 251 CVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGT 330 (384)
Q Consensus 251 c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~ 330 (384)
+....+...+.+|+.+++..+ ++ .+.++|+++.+.+. |+ .
T Consensus 114 ~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~~----------------~~----------~------- 153 (189)
T cd01825 114 GRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGGE----------------GG----------I------- 153 (189)
T ss_pred CCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCCc----------------ch----------h-------
Confidence 001112234566666655543 32 37789998775321 11 0
Q ss_pred cccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 331 VYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 331 ~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.......++..|++|||++||++||+.+.+
T Consensus 154 ----~~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~ 183 (189)
T cd01825 154 ----WQWAEPGLARKDYVHLTPRGYERLANLLYE 183 (189)
T ss_pred ----hHhhcccccCCCcccCCcchHHHHHHHHHH
Confidence 001112456689999999999999999875
No 21
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=99.11 E-value=1.4e-09 Score=98.03 Aligned_cols=105 Identities=12% Similarity=0.083 Sum_probs=66.9
Q ss_pred CCEEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecC
Q 016732 37 FPAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGG 116 (384)
Q Consensus 37 ~~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gG 116 (384)
-.+|++||||++.-... ..+..|+.+|++.+..... -+|.+++|
T Consensus 10 ~~~iv~~GDSit~G~~~-----------------------~~~~~w~~~l~~~l~~~~~-------------v~N~Gi~G 53 (191)
T PRK10528 10 ADTLLILGDSLSAGYRM-----------------------PASAAWPALLNDKWQSKTS-------------VVNASISG 53 (191)
T ss_pred CCEEEEEeCchhhcCCC-----------------------CccCchHHHHHHHHhhCCC-------------EEecCcCc
Confidence 56899999999663221 1245788999988754320 16888889
Q ss_pred ccccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHH
Q 016732 117 SSIRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVR 196 (384)
Q Consensus 117 A~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 196 (384)
.++. .+..+++. .... ..-++++|.+|+||.... .+
T Consensus 54 ~tt~-------~~~~rl~~---~l~~--------------------------~~pd~Vii~~GtND~~~~---~~----- 89 (191)
T PRK10528 54 DTSQ-------QGLARLPA---LLKQ--------------------------HQPRWVLVELGGNDGLRG---FP----- 89 (191)
T ss_pred ccHH-------HHHHHHHH---HHHh--------------------------cCCCEEEEEeccCcCccC---CC-----
Confidence 7753 23333322 1110 123788999999997532 22
Q ss_pred hhHHHHHHhhhHHHHHHHHhCCceEEE
Q 016732 197 ASIPDILSQFSKAVHQLYKEGARFFWI 223 (384)
Q Consensus 197 ~~v~~vv~~i~~~i~~L~~~GAr~~vV 223 (384)
.+++.+++.+.++.+.+.|++.+++
T Consensus 90 --~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 90 --PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred --HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 2355677777788888888887766
No 22
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=99.06 E-value=2.2e-09 Score=93.38 Aligned_cols=118 Identities=19% Similarity=0.280 Sum_probs=75.4
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSG 250 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~ 250 (384)
-.+++|.+|+||.... ... ....+...+++.+.++.+...+ +++++.+||..-.+...
T Consensus 62 ~d~vvi~~G~ND~~~~--~~~----~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~-------------- 119 (179)
T PF13472_consen 62 PDLVVISFGTNDVLNG--DEN----DTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP-------------- 119 (179)
T ss_dssp CSEEEEE--HHHHCTC--TTC----HHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT--------------
T ss_pred CCEEEEEccccccccc--ccc----cccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc--------------
Confidence 3689999999999863 111 2334566777778888887777 88888888754332211
Q ss_pred CchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCc
Q 016732 251 CVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGT 330 (384)
Q Consensus 251 c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~ 330 (384)
+..........+|+.+++..+ ++ .+.++|++..+.+ +.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~----~~------------------------------- 157 (179)
T PF13472_consen 120 KQDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD----HD------------------------------- 157 (179)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT----TT-------------------------------
T ss_pred cchhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc----cc-------------------------------
Confidence 112344566777877776543 32 7789999888542 00
Q ss_pred cccCCCCCCCCceecCCCChhHHHHHHH
Q 016732 331 VYGNPCHHPSKYISWDGIHYSQAANLWV 358 (384)
Q Consensus 331 ~~~~~C~~p~~ylfwD~~HPT~~~h~~i 358 (384)
.....+++.|++|||++||++|
T Consensus 158 ------~~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 158 ------GWFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp ------SCBHTCTBTTSSSBBHHHHHHH
T ss_pred ------ccchhhcCCCCCCcCHHHhCcC
Confidence 0122457799999999999986
No 23
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.06 E-value=2.9e-09 Score=93.97 Aligned_cols=120 Identities=16% Similarity=0.221 Sum_probs=79.8
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHh-CCceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKE-GARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
-.+++|++|+||.... .+ .++..+++.+.++++.+. ...+++++++||..-.+.
T Consensus 52 pd~v~i~~G~ND~~~~---~~-------~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~--------------- 106 (174)
T cd01841 52 PSKVFLFLGTNDIGKE---VS-------SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE--------------- 106 (174)
T ss_pred CCEEEEEeccccCCCC---CC-------HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc---------------
Confidence 3678999999998642 22 235566777777777765 356789989887643221
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
+....++....||+.+++..++. .+.++|+++.+.+-. |
T Consensus 107 -~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~~~---------------------------------~ 145 (174)
T cd01841 107 -IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVDEF---------------------------------G 145 (174)
T ss_pred -cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcCCC---------------------------------C
Confidence 01123455778998888765432 478899988754200 0
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+..+.+..|++||+++||++||+.+.+
T Consensus 146 --------~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 --------NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred --------CccccccCCCcccCHHHHHHHHHHHHh
Confidence 111245689999999999999999864
No 24
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=99.06 E-value=3.6e-09 Score=93.26 Aligned_cols=46 Identities=15% Similarity=0.217 Sum_probs=30.5
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTG 227 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lp 227 (384)
-.+++|.+|+||.... .+. ....+++.+.++++.+.|++ ++++++|
T Consensus 65 pd~v~i~~G~ND~~~~---~~~-------~~~~~~l~~li~~~~~~~~~-vil~~~~ 110 (177)
T cd01822 65 PDLVILELGGNDGLRG---IPP-------DQTRANLRQMIETAQARGAP-VLLVGMQ 110 (177)
T ss_pred CCEEEEeccCcccccC---CCH-------HHHHHHHHHHHHHHHHCCCe-EEEEecC
Confidence 3688999999997542 222 24556667777777777776 5555543
No 25
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=99.05 E-value=1.6e-08 Score=97.01 Aligned_cols=189 Identities=19% Similarity=0.135 Sum_probs=107.7
Q ss_pred CCcceeecCccccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcc
Q 016732 108 NGANFATGGSSIRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGF 187 (384)
Q Consensus 108 ~G~NyA~gGA~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~ 187 (384)
...|+|+.|+++. +|..|++...+..++.. . .....+-.|++|+||+||.....
T Consensus 83 ~~~N~av~Ga~s~-------dL~~qa~~lv~r~~~~~-----~--------------i~~~~dwklVtI~IG~ND~c~~~ 136 (288)
T cd01824 83 SGFNVAEPGAKSE-------DLPQQARLLVRRMKKDP-----R--------------VDFKNDWKLITIFIGGNDLCSLC 136 (288)
T ss_pred cceeecccCcchh-------hHHHHHHHHHHHHhhcc-----c--------------cccccCCcEEEEEecchhHhhhc
Confidence 5689999999975 58888886543322110 0 00012345789999999998632
Q ss_pred cCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCc-eEEEcccCCCCccccccccccCCCCCCCCCCCc----------hHHh
Q 016732 188 QHTNEEQVRASIPDILSQFSKAVHQLYKEGAR-FFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCV----------KPQN 256 (384)
Q Consensus 188 ~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr-~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~----------~~~n 256 (384)
.... ........+++.+.++.|.+..-| .|+++++|++...+..... +..-...-...|. +++.
T Consensus 137 ~~~~----~~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~-p~~c~~~~~~~C~c~~~~~~~~~~~~~ 211 (288)
T cd01824 137 EDAN----PGSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKK-PLQCETLLAPECPCLLGPTENSYQDLK 211 (288)
T ss_pred cccc----CcCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccC-CccccccCCCcCCCcCCCCcchHHHHH
Confidence 1111 122456677888888888887755 4777788887655443211 1000000011232 3566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCC
Q 016732 257 EMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPC 336 (384)
Q Consensus 257 ~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C 336 (384)
++.+.|++.+++..+.-+-+..+..+++.. ++.+.+.... + ..
T Consensus 212 ~~~~~y~~~~~eia~~~~~~~~~f~vv~qP---f~~~~~~~~~-----------------------~-----------~g 254 (288)
T cd01824 212 KFYKEYQNEVEEIVESGEFDREDFAVVVQP---FFEDTSLPPL-----------------------P-----------DG 254 (288)
T ss_pred HHHHHHHHHHHHHHhcccccccCccEEeeC---chhccccccc-----------------------c-----------CC
Confidence 777788887777665422222334454422 2222111000 0 00
Q ss_pred CCCCCceecCCCChhHHHHHHHHHHHHcC
Q 016732 337 HHPSKYISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 337 ~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
.+ .+++-||.+||++++|.++|+.+++.
T Consensus 255 ~d-~~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 255 PD-LSFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred Cc-chhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 12 15778999999999999999999873
No 26
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.04 E-value=5.1e-09 Score=90.52 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=79.5
Q ss_pred CCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHH-hCCceEEEcccCCCCccccccccccCCCCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYK-EGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQ 248 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~-~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~ 248 (384)
.-.++++.+|+||+.... ..+. ....+.+.+.++.+.+ ....+|++++.|+....|.
T Consensus 65 ~~d~vil~~G~ND~~~~~-~~~~-------~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~-------------- 122 (187)
T cd00229 65 KPDLVIIELGTNDLGRGG-DTSI-------DEFKANLEELLDALRERAPGAKVILITPPPPPPREG-------------- 122 (187)
T ss_pred CCCEEEEEeccccccccc-ccCH-------HHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch--------------
Confidence 568899999999997531 0121 2334444455555554 4556788889888766553
Q ss_pred CCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccC
Q 016732 249 SGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVN 328 (384)
Q Consensus 249 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~ 328 (384)
..+.....+|..+++..++.... ..+.++|++..+...
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~---------------------------------- 160 (187)
T cd00229 123 -----LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE---------------------------------- 160 (187)
T ss_pred -----hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC----------------------------------
Confidence 12234567777777766554321 347778886554321
Q ss_pred CccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 329 GTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 329 g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+..++++|++|||+++|+++|+.+++
T Consensus 161 ----------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ----------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ----------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34678899999999999999999875
No 27
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.03 E-value=7.8e-09 Score=92.84 Aligned_cols=123 Identities=16% Similarity=0.208 Sum_probs=70.1
Q ss_pred CCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
.-.+++|.+|.||.......... ...++..+.+...++++ +.++ +|+++++||+....
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~~~~----~~~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRKRPQ----LSARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCcccc----cCHHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------------
Confidence 44889999999999764211100 11122222333333332 2344 47787877653110
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
....+.....+|+.+++..++. .+.++|++..+.+. +.
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~~---~~------------------------------ 164 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLNH---PQ------------------------------ 164 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhcC---cH------------------------------
Confidence 0122445667787777665432 56788998765531 00
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
....++..|++||+++||++||+.+++
T Consensus 165 --------~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 --------WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred --------HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 011233369999999999999999875
No 28
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.99 E-value=4.8e-09 Score=96.12 Aligned_cols=118 Identities=19% Similarity=0.149 Sum_probs=75.6
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhC-CceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEG-ARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
-.+++|++|+||+... .+ .+++.+++.+.|+++.+.. ..+|++++++|....|
T Consensus 90 pd~VvI~~G~ND~~~~---~~-------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~---------------- 143 (214)
T cd01820 90 PKVVVLLIGTNNIGHT---TT-------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP---------------- 143 (214)
T ss_pred CCEEEEEecccccCCC---CC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc----------------
Confidence 4788999999998643 22 2345667777777777663 3468888887754221
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
..+.+....+|+.+++.+. + ..++.++|++..+.+ + .+
T Consensus 144 ---~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~---~-------------~g----------------- 181 (214)
T cd01820 144 ---NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQ---S-------------DG----------------- 181 (214)
T ss_pred ---hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhcc---c-------------CC-----------------
Confidence 1223445677777665432 1 136788998776541 0 00
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
...+.++.|++||+++||+++|+.+.+
T Consensus 182 --------~~~~~~~~DGlHpn~~Gy~~~a~~l~~ 208 (214)
T cd01820 182 --------TISHHDMPDYLHLTAAGYRKWADALHP 208 (214)
T ss_pred --------CcCHhhcCCCCCCCHHHHHHHHHHHHH
Confidence 111234589999999999999999875
No 29
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.93 E-value=2.6e-08 Score=87.66 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=74.1
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCC-ceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGA-RFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
-.+++|.+|+||+... .+ .+...+++.+.++++.+.+. .+|+++.+||. | ..
T Consensus 51 p~~vvi~~G~ND~~~~---~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~------------ 103 (171)
T cd04502 51 PRRVVLYAGDNDLASG---RT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR------------ 103 (171)
T ss_pred CCEEEEEEecCcccCC---CC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc------------
Confidence 3689999999997532 22 23556677777787777653 35777776542 1 10
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
...+.-...+|+.+++..+ +. ..+.++|++..+.+.
T Consensus 104 ---~~~~~~~~~~n~~~~~~a~----~~--~~v~~vD~~~~~~~~----------------------------------- 139 (171)
T cd04502 104 ---WALRPKIRRFNALLKELAE----TR--PNLTYIDVASPMLDA----------------------------------- 139 (171)
T ss_pred ---hhhHHHHHHHHHHHHHHHh----cC--CCeEEEECcHHHhCC-----------------------------------
Confidence 1122335667776666543 21 257789998765420
Q ss_pred ccccCCCCCC-CCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHP-SKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p-~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+.++ .+++..|++||+++||+++|+.+.+
T Consensus 140 ------~~~~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 140 ------DGKPRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred ------CCCcChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 0011 2456689999999999999998864
No 30
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.75 E-value=2.6e-07 Score=81.36 Aligned_cols=22 Identities=18% Similarity=0.006 Sum_probs=19.8
Q ss_pred eecCCCChhHHHHHHHHHHHHc
Q 016732 343 ISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 343 lfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.+.|++||++++|++||+.+++
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHH
Confidence 3589999999999999999875
No 31
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.71 E-value=1.2e-07 Score=83.11 Aligned_cols=117 Identities=26% Similarity=0.336 Sum_probs=76.5
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHh-CCceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKE-GARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
-.++++.+|.||.... .+. +...+++.+.|+.+.+. ...+|+++++||.+ +. .
T Consensus 49 pd~vvl~~G~ND~~~~---~~~-------~~~~~~l~~li~~~~~~~~~~~vi~~~~~p~~--~~---~----------- 102 (169)
T cd01828 49 PKAIFIMIGINDLAQG---TSD-------EDIVANYRTILEKLRKHFPNIKIVVQSILPVG--EL---K----------- 102 (169)
T ss_pred CCEEEEEeeccCCCCC---CCH-------HHHHHHHHHHHHHHHHHCCCCeEEEEecCCcC--cc---C-----------
Confidence 3889999999998642 222 34455666666777662 23458888888765 10 0
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
...+...+.||+.+++..++ .++.++|++..+.+ .
T Consensus 103 ---~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~----~------------------------------- 137 (169)
T cd01828 103 ---SIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTN----A------------------------------- 137 (169)
T ss_pred ---cCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcC----C-------------------------------
Confidence 11234567889888876552 25678898866421 0
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.. +..+++..|++|||++||+++|+.+.+
T Consensus 138 ---~~---~~~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 138 ---DG---DLKNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred ---CC---CcchhhccCccccCHHHHHHHHHHHHH
Confidence 00 123456789999999999999999875
No 32
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.65 E-value=2.3e-07 Score=80.35 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=80.1
Q ss_pred CCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCc-eEEEcccCCCCccccccccccCCCCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGAR-FFWIHNTGPIGCLPYSVIYDKSKPNNLDQ 248 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr-~~vV~~lpplg~~P~~~~~~~~~~~~~d~ 248 (384)
+-++++|.+|+||.... .+ ++...+++.+.|+++.+...+ +|+++++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~---~~-------~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN---RD-------PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------------- 94 (157)
T ss_pred CCCEEEEeccCcccccC---CC-------HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------------
Confidence 44789999999998653 22 234556666677777766432 46666665532110
Q ss_pred CCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccC
Q 016732 249 SGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVN 328 (384)
Q Consensus 249 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~ 328 (384)
.+...+.||+.+++.+++.+.. +..+.++|++..+.+
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------- 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------- 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC-----------------------------------
Confidence 1456789999999999886543 567888988654321
Q ss_pred CccccCCCCCCCCceecCCCChhHHHHHHHHHHHHcC
Q 016732 329 GTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 329 g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
+++.+|++|||+++|+.||+.+++.
T Consensus 132 ------------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ------------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ------------cccccCCCCCchHHHHHHHHHHHhh
Confidence 2466999999999999999998863
No 33
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.54 E-value=5.3e-07 Score=81.22 Aligned_cols=134 Identities=13% Similarity=0.047 Sum_probs=78.9
Q ss_pred ceEEEEeccchhhhcccCCC--HHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCC
Q 016732 172 ALYTFDIGQNDLAYGFQHTN--EEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQS 249 (384)
Q Consensus 172 sL~~i~iG~ND~~~~~~~~~--~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~ 249 (384)
++++|.+|+||......... ......+.+...+++...++.+.+.|++ +++++.||+.-
T Consensus 61 d~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------------ 121 (200)
T cd01829 61 DVVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------------ 121 (200)
T ss_pred CEEEEEecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC------------------
Confidence 67888999999875321110 0001123345556667777777666765 77778777531
Q ss_pred CCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCC
Q 016732 250 GCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNG 329 (384)
Q Consensus 250 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g 329 (384)
...++....+|..+++..++ . .+.++|++..+.+ ...|+... +
T Consensus 122 ---~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~-------------~~~~~~~~--------------~ 164 (200)
T cd01829 122 ---PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD-------------ENGRFTYS--------------G 164 (200)
T ss_pred ---hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC-------------CCCCeeee--------------c
Confidence 11234456778777665443 2 4688999877632 11222110 0
Q ss_pred ccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 330 TVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 330 ~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.....+...++..|++|||+++|+++|+.+++
T Consensus 165 ---~~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~ 196 (200)
T cd01829 165 ---TDVNGKKVRLRTNDGIHFTAAGGRKLAFYVEK 196 (200)
T ss_pred ---cCCCCcEEEeecCCCceECHHHHHHHHHHHHH
Confidence 00111233455679999999999999999876
No 34
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.48 E-value=1.4e-06 Score=78.15 Aligned_cols=136 Identities=16% Similarity=0.145 Sum_probs=90.0
Q ss_pred CCceEEEEeccchhhhcccCC--CHHHHHhhHHHHHHhhhHHHHHHHHhC-CceEEEcccCCCCccccccccccCCCCCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHT--NEEQVRASIPDILSQFSKAVHQLYKEG-ARFFWIHNTGPIGCLPYSVIYDKSKPNNL 246 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~--~~~~~~~~v~~vv~~i~~~i~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~~~~~ 246 (384)
.-.+++|++|+||-...-.+. ..-.+ ++-++++++.++-|...- -.+|++++-||+...-....... .+
T Consensus 68 ~p~lvtVffGaNDs~l~~~~~~~~hvPl----~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e----~~ 139 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLPEPSSLGQHVPL----EEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQE----PY 139 (245)
T ss_pred CceEEEEEecCccccCCCCCCCCCccCH----HHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhcc----ch
Confidence 458899999999987542111 01122 344666666666665544 35688888888765533332211 11
Q ss_pred CCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcc
Q 016732 247 DQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKAT 326 (384)
Q Consensus 247 d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~ 326 (384)
..-.++.|+.+..|++.+.+..+++ ++..+|.++.+++.
T Consensus 140 --~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~-------------------------------- 178 (245)
T KOG3035|consen 140 --VLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQES-------------------------------- 178 (245)
T ss_pred --hccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhc--------------------------------
Confidence 1223578999999999998887765 56677887766531
Q ss_pred cCCccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 327 VNGTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 327 ~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
.|..+-.|||++|.|..|++++.++++.
T Consensus 179 ----------~dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 179 ----------DDWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred ----------ccHHHHHhccceeeccccchhhHHHHHH
Confidence 0223346799999999999999999876
No 35
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.33 E-value=5.9e-06 Score=78.74 Aligned_cols=154 Identities=20% Similarity=0.221 Sum_probs=85.0
Q ss_pred ceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCc--eEEEcccCCCCcc---------cccccccc
Q 016732 172 ALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGAR--FFWIHNTGPIGCL---------PYSVIYDK 240 (384)
Q Consensus 172 sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr--~~vV~~lpplg~~---------P~~~~~~~ 240 (384)
.+++|++|+||.....-... + ...+++--+++.+.|+.|.+...+ +|+++++|++... |.......
T Consensus 124 ~lVtI~lGgND~C~g~~d~~--~-~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hplg~~~~~ 200 (305)
T cd01826 124 ALVIYSMIGNDVCNGPNDTI--N-HTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHPIGQLNKD 200 (305)
T ss_pred eEEEEEeccchhhcCCCccc--c-CcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhccccccchhcccc
Confidence 78888999999976421111 1 233456677888888889888754 8999999984222 00000000
Q ss_pred CC-CCCCC------CCCCch------HHhHHHHHHHHHHHHHHHHHHhc--CCCCeEEEecchHHHHHHHHccccCCCcC
Q 016732 241 SK-PNNLD------QSGCVK------PQNEMAQEFNRQLKDKVSQLRLQ--LPYGAFTYVDVYSVKYALISNAQNQGFVD 305 (384)
Q Consensus 241 ~~-~~~~d------~~~c~~------~~n~~~~~~N~~L~~~l~~l~~~--~~g~~i~~~D~~~~~~~ii~nP~~yGf~~ 305 (384)
.. +.-|| -..|.. ...++...+=++|..+..++.++ +....|++.|+. +..+.....+.|
T Consensus 201 vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~~~~g--- 275 (305)
T cd01826 201 VTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMWIAFG--- 275 (305)
T ss_pred cchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHHHhcC---
Confidence 00 00011 113432 12233334444444444444433 345677777763 444444322111
Q ss_pred CcccccccccCCccccCCCcccCCccccCCCCCCCCcee-cCCCChhHHHHHHHHHHHHc
Q 016732 306 PMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYIS-WDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 306 ~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylf-wD~~HPT~~~h~~iA~~~~~ 364 (384)
| .+-+++. .|++||++.+|.++|+.+++
T Consensus 276 -----------------------~--------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 276 -----------------------G--------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred -----------------------C--------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 0 2335566 79999999999999999875
No 36
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=98.18 E-value=1.8e-05 Score=70.14 Aligned_cols=173 Identities=18% Similarity=0.238 Sum_probs=82.1
Q ss_pred CEEEEcCCcccccCCCCcCCCCCCCCCCCCCCCCCccccCCCchHHHHHHhhccCCCCCCccCcCCCccCCCcceeecCc
Q 016732 38 PAVYNFGDSNSDTGGISAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGS 117 (384)
Q Consensus 38 ~~l~vFGDSlsD~Gn~~~~~~~~~~Pyg~~~~~~p~GRfSnG~~w~d~la~~lg~~~~ppyl~~~~~~~~~G~NyA~gGA 117 (384)
+++++.|+|.+.-+.. .+-|..|+-.++..+|++. +|.+++|.
T Consensus 2 k~~v~YGsSItqG~~A----------------------srpg~~~~~~~aR~l~~~~---------------iNLGfsG~ 44 (178)
T PF14606_consen 2 KRWVAYGSSITQGACA----------------------SRPGMAYPAILARRLGLDV---------------INLGFSGN 44 (178)
T ss_dssp -EEEEEE-TT-TTTT-----------------------SSGGGSHHHHHHHHHT-EE---------------EEEE-TCC
T ss_pred CeEEEECChhhcCCCC----------------------CCCcccHHHHHHHHcCCCe---------------EeeeecCc
Confidence 4688889887765552 1237899999999999876 69999998
Q ss_pred cccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhcccCCCHHHHHh
Q 016732 118 SIRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQHTNEEQVRA 197 (384)
Q Consensus 118 ~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 197 (384)
+- ++..+..++.. .+.++|++..|.| + +. +
T Consensus 45 ~~---------le~~~a~~ia~-----------------------------~~a~~~~ld~~~N-----~-~~--~---- 74 (178)
T PF14606_consen 45 GK---------LEPEVADLIAE-----------------------------IDADLIVLDCGPN-----M-SP--E---- 74 (178)
T ss_dssp CS-----------HHHHHHHHH-----------------------------S--SEEEEEESHH-----C-CT--T----
T ss_pred cc---------cCHHHHHHHhc-----------------------------CCCCEEEEEeecC-----C-CH--H----
Confidence 73 55565554431 1348999999999 1 11 1
Q ss_pred hHHHHHHhhhHHHHHHHHhC-CceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhc
Q 016732 198 SIPDILSQFSKAVHQLYKEG-ARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQ 276 (384)
Q Consensus 198 ~v~~vv~~i~~~i~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~ 276 (384)
.+..++...|+.|.+.= -.-|+++.... .... . .........+.+|+.+++.+++++++
T Consensus 75 ---~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~---~------------~~~~~~~~~~~~~~~~r~~v~~l~~~ 134 (178)
T PF14606_consen 75 ---EFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG---Y------------FDNSRGETVEEFREALREAVEQLRKE 134 (178)
T ss_dssp ---THHHHHHHHHHHHHTT-SSS-EEEEE------TTT---T------------S--TTS--HHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc---c------------cCchHHHHHHHHHHHHHHHHHHHHHc
Confidence 23344445566665443 34566655322 1111 1 11122345678999999999999764
Q ss_pred CCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCcccCCccccCCCCCCCCceecCCCChhHHHHH
Q 016732 277 LPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGTVYGNPCHHPSKYISWDGIHYSQAANL 356 (384)
Q Consensus 277 ~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~~~~~~C~~p~~ylfwD~~HPT~~~h~ 356 (384)
..-++.++|-..++-+ +.-..-|++|||..||.
T Consensus 135 -g~~nl~~l~g~~llg~----------------------------------------------d~e~tvDgvHP~DlG~~ 167 (178)
T PF14606_consen 135 -GDKNLYYLDGEELLGD----------------------------------------------DHEATVDGVHPNDLGMM 167 (178)
T ss_dssp -T-TTEEEE-HHHCS-----------------------------------------------------------------
T ss_pred -CCCcEEEeCchhhcCc----------------------------------------------ccccccccccccccccc
Confidence 4567888876554211 01134799999999999
Q ss_pred HHHHHHHc
Q 016732 357 WVANRILN 364 (384)
Q Consensus 357 ~iA~~~~~ 364 (384)
.+|+.+..
T Consensus 168 ~~a~~l~~ 175 (178)
T PF14606_consen 168 RMADALEP 175 (178)
T ss_dssp --------
T ss_pred cccccccc
Confidence 99998753
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=98.16 E-value=5.1e-05 Score=69.21 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=20.2
Q ss_pred eecCCCChhHHHHHHHHHHHHcC
Q 016732 343 ISWDGIHYSQAANLWVANRILNG 365 (384)
Q Consensus 343 lfwD~~HPT~~~h~~iA~~~~~~ 365 (384)
..+|++||+.++|+.||+.+.+.
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHH
Confidence 33999999999999999998753
No 38
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.11 E-value=1.4e-05 Score=68.96 Aligned_cols=23 Identities=26% Similarity=0.283 Sum_probs=20.3
Q ss_pred ceecCCCChhHHHHHHHHHHHHc
Q 016732 342 YISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 342 ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
++..|++||+++||+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 45579999999999999999875
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=97.72 E-value=0.00078 Score=66.00 Aligned_cols=89 Identities=19% Similarity=0.096 Sum_probs=56.0
Q ss_pred CcceeecCccccCCCCcccchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccccCCCceEEEEeccchhhhccc
Q 016732 109 GANFATGGSSIRPGGFSPFHLGIQISQFIQFKSRTSAVYNQLSPNRTTPPFKSNLPRPRDFSKALYTFDIGQNDLAYGFQ 188 (384)
Q Consensus 109 G~NyA~gGA~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~sL~~i~iG~ND~~~~~~ 188 (384)
+.|-|++||... +|-.|-+...+-.++. .+- .-..+--|+.||||+||+-..-.
T Consensus 149 ~lNvA~~Ga~s~-------Dlp~QAr~Lv~rik~~---~~i----------------~~~~dWKLi~IfIG~ND~c~~c~ 202 (397)
T KOG3670|consen 149 QLNVAEPGAESE-------DLPDQARDLVSRIKKD---KEI----------------NMKNDWKLITIFIGTNDLCAYCE 202 (397)
T ss_pred ccccccccccch-------hhHHHHHHHHHHHHhc---cCc----------------ccccceEEEEEEeccchhhhhcc
Confidence 467788887754 6888887655443332 121 11135678999999999987543
Q ss_pred CCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcc
Q 016732 189 HTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHN 225 (384)
Q Consensus 189 ~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~ 225 (384)
.. .+....++.-.++|.++++.|.+.=-|.+|++-
T Consensus 203 ~~--~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~lv 237 (397)
T KOG3670|consen 203 GP--ETPPSPVDQHKRNIRKALEILRDNVPRTIVSLV 237 (397)
T ss_pred CC--CCCCCchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 21 111233445567788999999887777765543
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.60 E-value=0.045 Score=52.50 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=78.2
Q ss_pred CceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCC---ceEEEcccCCCCccccccccccCCCCCCC
Q 016732 171 KALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGA---RFFWIHNTGPIGCLPYSVIYDKSKPNNLD 247 (384)
Q Consensus 171 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA---r~~vV~~lpplg~~P~~~~~~~~~~~~~d 247 (384)
=+..+|.+|.||.....-+..... .--+.-.+.+.+-+++|.+.-. -+++.+++|+.-
T Consensus 178 ~a~vVV~lGaND~q~~~~gd~~~k--f~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r----------------- 238 (354)
T COG2845 178 PAAVVVMLGANDRQDFKVGDVYEK--FRSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR----------------- 238 (354)
T ss_pred ccEEEEEecCCCHHhcccCCeeee--cCchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc-----------------
Confidence 356788999999987642211100 0012344455555555554432 257888887641
Q ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHHHccccCCCcCCcccccccccCCccccCCCccc
Q 016732 248 QSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALISNAQNQGFVDPMNFCCGSFYGYHIDCGKKATV 327 (384)
Q Consensus 248 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~ 327 (384)
.+.+|+-...+|....+.++++. .+ ++|+++.+-+. +.+ + + .....+.
T Consensus 239 ----~~~l~~dm~~ln~iy~~~vE~~~-----gk--~i~i~d~~v~e---~G~-------~-----f------~~~~~D~ 286 (354)
T COG2845 239 ----KKKLNADMVYLNKIYSKAVEKLG-----GK--FIDIWDGFVDE---GGK-------D-----F------VTTGVDI 286 (354)
T ss_pred ----ccccchHHHHHHHHHHHHHHHhC-----Ce--EEEeccccccc---CCc-------e-----e------EEecccc
Confidence 13456677899999998888773 34 34554443221 110 0 0 0001122
Q ss_pred CCccccCCCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 016732 328 NGTVYGNPCHHPSKYISWDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 328 ~g~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 364 (384)
+| .+-++.-=|++|.|.+|-+.+|.++++
T Consensus 287 NG--------q~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 287 NG--------QPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred CC--------ceEEEeccCCceechhhHHHHHHHHHH
Confidence 33 344666789999999999999998864
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=93.19 E-value=2.1 Score=38.07 Aligned_cols=20 Identities=30% Similarity=0.551 Sum_probs=18.4
Q ss_pred cCCCChhHHHHHHHHHHHHc
Q 016732 345 WDGIHYSQAANLWVANRILN 364 (384)
Q Consensus 345 wD~~HPT~~~h~~iA~~~~~ 364 (384)
.|++|.++.+|+.+++.++.
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 79999999999999998864
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=90.21 E-value=1.6 Score=41.08 Aligned_cols=107 Identities=13% Similarity=0.232 Sum_probs=66.2
Q ss_pred CCceEEEEeccchhhhccc------CC--CH----HHHH-----hhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCcc
Q 016732 170 SKALYTFDIGQNDLAYGFQ------HT--NE----EQVR-----ASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCL 232 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~------~~--~~----~~~~-----~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~ 232 (384)
+-++++|-.|..-.+..-. +- .+ +.-. ..++++++.+...++.|.+..-+-=+|+++.|+
T Consensus 101 ~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV--- 177 (251)
T PF08885_consen 101 EADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV--- 177 (251)
T ss_pred hCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc---
Confidence 4577888999887765421 10 00 1111 346788888888888888877655567788775
Q ss_pred ccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHH
Q 016732 233 PYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYA 293 (384)
Q Consensus 233 P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ 293 (384)
|...+... .| .-..|..++ ..|+..+.++.+++ .++.||-.|.++++
T Consensus 178 rl~~T~~~-----~d----~~~an~~SK---s~Lr~a~~~l~~~~--~~v~YFPSYEiv~d 224 (251)
T PF08885_consen 178 RLIATFRD-----RD----GLVANQYSK---STLRAAAHELVRAF--DDVDYFPSYEIVMD 224 (251)
T ss_pred hhhccccc-----cc----chhhhhhhH---HHHHHHHHHHHhcC--CCceEcchHhhccC
Confidence 44443321 01 123344444 46777888888765 46789988888764
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=79.35 E-value=7.4 Score=33.77 Aligned_cols=64 Identities=8% Similarity=0.172 Sum_probs=44.2
Q ss_pred hhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 016732 206 FSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYV 285 (384)
Q Consensus 206 i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~ 285 (384)
+.+.|++|.+.|+|+|+| .|.++.... .....+.+.++++++++|+.+|.+.
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G~--------------------H~~~DIp~~v~~~~~~~p~~~i~~~ 111 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPGR--------------------HWQEDIPALTAEAAKEHPGVKYLVT 111 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCCc--------------------chHhHHHHHHHHHHHHCCCcEEEEC
Confidence 345678888889999988 577765421 2234567788888999999998875
Q ss_pred c---chHHHHHHHHc
Q 016732 286 D---VYSVKYALISN 297 (384)
Q Consensus 286 D---~~~~~~~ii~n 297 (384)
. .+..+.+++.+
T Consensus 112 ~pLG~~p~l~~ll~~ 126 (154)
T PLN02757 112 APIGLHELMVDVVND 126 (154)
T ss_pred CCCCCCHHHHHHHHH
Confidence 3 44456665543
No 44
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=76.26 E-value=2.7 Score=41.46 Aligned_cols=69 Identities=25% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccc
Q 016732 169 FSKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVI 237 (384)
Q Consensus 169 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~ 237 (384)
..+.++..|+|+||+...-...+.......+......+.+++..++.++.-.|+..+.|.++..|..+.
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred CcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 367889999999999876422211111123445566778888999999999999999999999998875
No 45
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=64.54 E-value=31 Score=31.87 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=49.6
Q ss_pred EEEeccchhhhcccC-CCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCch
Q 016732 175 TFDIGQNDLAYGFQH-TNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVK 253 (384)
Q Consensus 175 ~i~iG~ND~~~~~~~-~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~ 253 (384)
.++.|.+.....|-. .+. .. +...+-+.+.++.|...|.|+|+++|- .++
T Consensus 61 ~i~yG~s~~h~~fpGTisl-~~----~t~~~~l~di~~sl~~~Gf~~ivivng---------------------HgG--- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGFPGTISL-SP----ETLIALLRDILRSLARHGFRRIVIVNG---------------------HGG--- 111 (237)
T ss_dssp -B--BB-GCCTTSTT-BBB--H----HHHHHHHHHHHHHHHHHT--EEEEEES---------------------STT---
T ss_pred CCccccCcccCCCCCeEEe-CH----HHHHHHHHHHHHHHHHcCCCEEEEEEC---------------------CHh---
Confidence 457888888765521 111 11 233344566678889999999999882 111
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEecchHHHHHHH
Q 016732 254 PQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVDVYSVKYALI 295 (384)
Q Consensus 254 ~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii 295 (384)
....|...++++++++++..+.++|.+.+.....
T Consensus 112 --------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 112 --------NIAALEAAARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp --------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred --------HHHHHHHHHHHHHhhCCCcEEEEeechhccchhh
Confidence 1124667777888888899999999988865543
No 46
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=63.74 E-value=16 Score=28.74 Aligned_cols=52 Identities=15% Similarity=0.279 Sum_probs=34.6
Q ss_pred hHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 016732 207 SKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVD 286 (384)
Q Consensus 207 ~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 286 (384)
.+.+++|.+.|+++++| .|.++.... .....+...+++++.++++.+|.+.+
T Consensus 47 ~~~l~~l~~~g~~~v~v--------vPlfl~~G~--------------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 47 AEALDELAAQGATRIVV--------VPLFLLAGG--------------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHcCCCEEEE--------EeeEeCCCc--------------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 34577888889999988 466664421 12234556666777788888887754
No 47
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=58.63 E-value=8.5 Score=30.48 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=36.0
Q ss_pred hHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 016732 207 SKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYVD 286 (384)
Q Consensus 207 ~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~D 286 (384)
.+.+++|.+.|+++|+| .|.++... ......+.+.++.++.++|+.+|.+..
T Consensus 40 ~~~l~~l~~~g~~~ivv--------vP~fL~~G--------------------~h~~~DIp~~l~~~~~~~~~~~v~~~~ 91 (105)
T PF01903_consen 40 EEALERLVAQGARRIVV--------VPYFLFPG--------------------YHVKRDIPEALAEARERHPGIEVRVAP 91 (105)
T ss_dssp HHCCHHHHCCTCSEEEE--------EEESSSSS--------------------HHHHCHHHHHHCHHHHCSTTEEEEE--
T ss_pred HHHHHHHHHcCCCeEEE--------EeeeecCc--------------------cchHhHHHHHHHHHHhhCCceEEEECC
Confidence 34568888889999988 46776431 122234677888899999999888754
Q ss_pred c
Q 016732 287 V 287 (384)
Q Consensus 287 ~ 287 (384)
.
T Consensus 92 p 92 (105)
T PF01903_consen 92 P 92 (105)
T ss_dssp -
T ss_pred C
Confidence 3
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=48.40 E-value=55 Score=31.69 Aligned_cols=64 Identities=9% Similarity=0.064 Sum_probs=40.9
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYG 280 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~ 280 (384)
..++.+.+.++++.++|.+.|+++++|.. ..+... +..+ =|..+.+.++.+++++|+.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~gs----------------~A~~-----~~g~v~~air~iK~~~p~l 105 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIGS----------------EAYD-----PDGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCcc----------------cccC-----CCChHHHHHHHHHHhCCCc
Confidence 44677888899999999999999998642 111111 0111 0234567778888888875
Q ss_pred eEEEecc
Q 016732 281 AFTYVDV 287 (384)
Q Consensus 281 ~i~~~D~ 287 (384)
-| +.|+
T Consensus 106 ~v-i~Dv 111 (314)
T cd00384 106 VV-ITDV 111 (314)
T ss_pred EE-EEee
Confidence 43 3444
No 49
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=47.29 E-value=55 Score=31.76 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=41.3
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYG 280 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~ 280 (384)
..++.+.+.++.+.++|.+.|+++++|+. .-+... +..+ =|..+.+.++.+++++|+.
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~gs----------------~A~~-----~~g~v~~air~iK~~~pdl 115 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDAKGS----------------DTWD-----DNGLLARMVRTIKAAVPEM 115 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCcc----------------cccC-----CCChHHHHHHHHHHHCCCe
Confidence 44677788899999999999999998642 111110 0111 1234567788888899886
Q ss_pred eEEEecc
Q 016732 281 AFTYVDV 287 (384)
Q Consensus 281 ~i~~~D~ 287 (384)
-| +.|+
T Consensus 116 ~v-i~DV 121 (322)
T PRK13384 116 MV-IPDI 121 (322)
T ss_pred EE-Eeee
Confidence 54 3444
No 50
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=44.63 E-value=64 Score=31.32 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=24.0
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGP 228 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpp 228 (384)
..++.+.+.++++.++|.+.|+++++|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~ 75 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPL 75 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCc
Confidence 3467778889999999999999999964
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=44.30 E-value=64 Score=31.42 Aligned_cols=64 Identities=9% Similarity=0.066 Sum_probs=40.9
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYG 280 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~ 280 (384)
..++.+.+.++++.++|.+.|+++++|.. .-+... +..+. |..+.+.++.+++++|+.
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs----------------~A~~~-----~g~v~rair~iK~~~p~l 113 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGS----------------EAYNP-----DGLVQRAIRAIKKAFPEL 113 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccc----------------cccCC-----CCHHHHHHHHHHHhCCCc
Confidence 34677788899999999999999998432 111111 11111 234567788888888876
Q ss_pred eEEEecc
Q 016732 281 AFTYVDV 287 (384)
Q Consensus 281 ~i~~~D~ 287 (384)
-| +.|+
T Consensus 114 ~v-i~DV 119 (323)
T PRK09283 114 GV-ITDV 119 (323)
T ss_pred EE-EEee
Confidence 43 4444
No 52
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=44.07 E-value=72 Score=25.61 Aligned_cols=50 Identities=24% Similarity=0.425 Sum_probs=32.1
Q ss_pred hhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 016732 206 FSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAFTYV 285 (384)
Q Consensus 206 i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i~~~ 285 (384)
+.+.+++|.+.|.++++| .|.++... ..++ .+...+++++++ |+.+|.+.
T Consensus 47 ~~~~l~~l~~~g~~~i~v--------vP~fL~~G--------------------~h~~-~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 47 LPEALERLRALGARRVVV--------LPYLLFTG--------------------VLMD-RIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHHHHHcCCCEEEE--------EechhcCC--------------------chHH-HHHHHHHHHHhC-CCceEEEC
Confidence 345677888899999888 46665431 0122 355667777777 77777663
No 53
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=43.73 E-value=58 Score=27.38 Aligned_cols=72 Identities=18% Similarity=0.121 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCeEEEecchHHHHHHHH---------------ccccCCCcCCcccccccccCCccccCCCcccCCc
Q 016732 266 LKDKVSQLRLQLPYGAFTYVDVYSVKYALIS---------------NAQNQGFVDPMNFCCGSFYGYHIDCGKKATVNGT 330 (384)
Q Consensus 266 L~~~l~~l~~~~~g~~i~~~D~~~~~~~ii~---------------nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~~g~ 330 (384)
|+-+|+.+++..-..-|+...++..+.+-+. --+++|| ++.+
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf-~v~D---------------------- 94 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF-NVAD---------------------- 94 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE----------------------
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEe----------------------
Confidence 4566777777655567778888887776431 1245566 2211
Q ss_pred cccCCCCCCCCceecCCCChhHHHHHHHHHHHH
Q 016732 331 VYGNPCHHPSKYISWDGIHYSQAANLWVANRIL 363 (384)
Q Consensus 331 ~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~ 363 (384)
.+.+ .-+.|++-|.+||..+|+-.+-+.|.
T Consensus 95 --~s~~-~y~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 95 --FSDD-EYEPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp ---TTG-TTSTTSBSSSSSB-THHHHHHHHHHH
T ss_pred --cccC-CCCCceeeecccCchhhHHHHHHHHH
Confidence 0011 23468999999999999988877765
No 54
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=43.42 E-value=65 Score=31.36 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=37.6
Q ss_pred HHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 016732 203 LSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAF 282 (384)
Q Consensus 203 v~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i 282 (384)
++.+.+.++++.++|.+.|+++++.+ |..+.... .+..+ =|.-+.+.++.+++.+|+.-|
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g-----------s~a~~-----~~g~v~~air~iK~~~pdl~v 115 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG-----------SEAYN-----PDGLVQRAIRAIKKAFPDLLV 115 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------------GGGGS-----TTSHHHHHHHHHHHHSTTSEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch-----------hcccC-----CCChHHHHHHHHHHhCCCcEE
Confidence 56777888999999999999999833 22221110 01111 123456778888999998644
Q ss_pred EEecc
Q 016732 283 TYVDV 287 (384)
Q Consensus 283 ~~~D~ 287 (384)
+.|+
T Consensus 116 -i~Dv 119 (324)
T PF00490_consen 116 -ITDV 119 (324)
T ss_dssp -EEEE
T ss_pred -EEec
Confidence 4444
No 55
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=43.42 E-value=65 Score=31.30 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=23.8
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGP 228 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpp 228 (384)
..++.+.+.++++.++|.+.|++++++|
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~ 78 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTP 78 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 4467788889999999999999999843
No 56
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=40.48 E-value=96 Score=25.70 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=34.5
Q ss_pred HHhhhHHHHHHHHhCCceEEEcccCCCCccccccccccCCCCCCCCCCCchHHhHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 016732 203 LSQFSKAVHQLYKEGARFFWIHNTGPIGCLPYSVIYDKSKPNNLDQSGCVKPQNEMAQEFNRQLKDKVSQLRLQLPYGAF 282 (384)
Q Consensus 203 v~~i~~~i~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~~~~d~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~g~~i 282 (384)
+.++.+.+++|.+.|.++|+|. |.+.... ..| ..|.+.+++++ ++..+|
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~--------Pl~l~~G--------------------~e~-~di~~~v~~~~--~~~~~i 103 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQ--------SLHIIPG--------------------EEY-EKLKREVDAFK--KGFKKI 103 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEE--------eCeeECc--------------------HHH-HHHHHHHHHHh--CCCceE
Confidence 3456788999999999999994 4444321 123 46667777776 566676
Q ss_pred EEe
Q 016732 283 TYV 285 (384)
Q Consensus 283 ~~~ 285 (384)
.+.
T Consensus 104 ~~g 106 (127)
T cd03412 104 KLG 106 (127)
T ss_pred EEc
Confidence 664
No 57
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=34.20 E-value=27 Score=26.41 Aligned_cols=20 Identities=15% Similarity=0.090 Sum_probs=15.0
Q ss_pred hHHHHHHHHhCCceEEEccc
Q 016732 207 SKAVHQLYKEGARFFWIHNT 226 (384)
Q Consensus 207 ~~~i~~L~~~GAr~~vV~~l 226 (384)
.+.+.+|.++||+.|+|..+
T Consensus 53 ~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 53 WDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHcCCCEEEEEec
Confidence 45578889999999999765
No 58
>PRK13660 hypothetical protein; Provisional
Probab=33.02 E-value=2e+02 Score=25.73 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=21.2
Q ss_pred HHHHHHhhhHHHHHHHHhCCceEEEcc
Q 016732 199 IPDILSQFSKAVHQLYKEGARFFWIHN 225 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~GAr~~vV~~ 225 (384)
+..+-..+++.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 345556778899999999999988744
No 59
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=32.05 E-value=49 Score=26.43 Aligned_cols=22 Identities=18% Similarity=0.232 Sum_probs=17.7
Q ss_pred hhhHHHHHHHHhCCceEEEccc
Q 016732 205 QFSKAVHQLYKEGARFFWIHNT 226 (384)
Q Consensus 205 ~i~~~i~~L~~~GAr~~vV~~l 226 (384)
.+.+.+..|.++||+.|+|..+
T Consensus 75 ~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 75 VVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHcCCCeEEEech
Confidence 3556678899999999999764
No 60
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=31.60 E-value=77 Score=30.64 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=24.6
Q ss_pred HHHHhhhHHHHHHHHhCCceEEEcccCC
Q 016732 201 DILSQFSKAVHQLYKEGARFFWIHNTGP 228 (384)
Q Consensus 201 ~vv~~i~~~i~~L~~~GAr~~vV~~lpp 228 (384)
..++.+.+.++++.++|.+-|+++++|+
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~ 85 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPD 85 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 4477788888999999999999999986
No 61
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=30.88 E-value=94 Score=27.58 Aligned_cols=27 Identities=30% Similarity=0.459 Sum_probs=19.5
Q ss_pred HHHHHHhhhHHHHHHHHhCCceEEEcc
Q 016732 199 IPDILSQFSKAVHQLYKEGARFFWIHN 225 (384)
Q Consensus 199 v~~vv~~i~~~i~~L~~~GAr~~vV~~ 225 (384)
+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 456777888999999999999988743
No 62
>PRK01844 hypothetical protein; Provisional
Probab=28.83 E-value=39 Score=25.35 Aligned_cols=19 Identities=16% Similarity=0.454 Sum_probs=14.5
Q ss_pred hhHHHHHHHHHHHHhccch
Q 016732 6 IRLFYAYLLPIFAFMGGPM 24 (384)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~ 24 (384)
|.+|+.+|+.|++|.++.+
T Consensus 1 M~~~~~I~l~I~~li~G~~ 19 (72)
T PRK01844 1 MPIWLGILVGVVALVAGVA 19 (72)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 4578888888888887764
No 63
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=22.79 E-value=94 Score=18.33 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=10.2
Q ss_pred CCccch-hHHHHHHHHHHHHhccc
Q 016732 1 MEPVDI-RLFYAYLLPIFAFMGGP 23 (384)
Q Consensus 1 ~~~~~~-~~~~~~~~~~~~~~~~~ 23 (384)
||...| |++...++.++. +++|
T Consensus 1 M~~~~mmKkil~~l~a~~~-LagC 23 (25)
T PF08139_consen 1 MPSLSMMKKILFPLLALFM-LAGC 23 (25)
T ss_pred CchHHHHHHHHHHHHHHHH-Hhhc
Confidence 344444 555544444444 4444
No 64
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=22.03 E-value=3.4e+02 Score=25.78 Aligned_cols=45 Identities=7% Similarity=0.135 Sum_probs=35.2
Q ss_pred CCceEEEEeccchhhhcccCCCHHHHHhhHHHHHHhhhHHHHHHHHhCCceEEEcccCC
Q 016732 170 SKALYTFDIGQNDLAYGFQHTNEEQVRASIPDILSQFSKAVHQLYKEGARFFWIHNTGP 228 (384)
Q Consensus 170 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAr~~vV~~lpp 228 (384)
+...++|-+|+|=+.. ++..+.+...|.-|+..|.|-|+|.+-.|
T Consensus 34 ~~~f~VIK~GG~~~~~--------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS--------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC--------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5778888999986532 13456677788999999999999999866
No 65
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=21.48 E-value=1.3e+02 Score=28.98 Aligned_cols=16 Identities=38% Similarity=0.420 Sum_probs=12.8
Q ss_pred ceEEEEeccchhhhcc
Q 016732 172 ALYTFDIGQNDLAYGF 187 (384)
Q Consensus 172 sL~~i~iG~ND~~~~~ 187 (384)
-+=+++||.||+....
T Consensus 197 ~~DF~SIGtNDLtQy~ 212 (293)
T PF02896_consen 197 EVDFFSIGTNDLTQYT 212 (293)
T ss_dssp TSSEEEEEHHHHHHHH
T ss_pred HCCEEEEChhHHHHHH
Confidence 3557899999998864
No 66
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=21.35 E-value=2.3e+02 Score=23.72 Aligned_cols=19 Identities=26% Similarity=0.351 Sum_probs=15.0
Q ss_pred hHHHHHHHHhCCceEEEcc
Q 016732 207 SKAVHQLYKEGARFFWIHN 225 (384)
Q Consensus 207 ~~~i~~L~~~GAr~~vV~~ 225 (384)
.+.|++|.+.|+|+|+|+-
T Consensus 80 ~~~l~~l~~~G~~~i~v~p 98 (135)
T cd00419 80 DDALEELAKEGVKNVVVVP 98 (135)
T ss_pred HHHHHHHHHcCCCeEEEEC
Confidence 3457888899999999853
No 67
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=20.86 E-value=1.6e+02 Score=24.61 Aligned_cols=26 Identities=12% Similarity=0.240 Sum_probs=22.9
Q ss_pred chHHhHHHHHHHHHHHHHHHHHHhcC
Q 016732 252 VKPQNEMAQEFNRQLKDKVSQLRLQL 277 (384)
Q Consensus 252 ~~~~n~~~~~~N~~L~~~l~~l~~~~ 277 (384)
.++.+.++..||+.|.+.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36778899999999999999999875
Done!