BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016733
(384 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 42/249 (16%)
Query: 45 ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLS--AE 102
+ SML+ G+ +A + GVYDGHGG + + + + L E E+ LS
Sbjct: 38 SGSMLD--GRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLAL-AEEIAKEKPMLSDGDT 94
Query: 103 VIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRV 162
++K A FL + S P+ +VGS +V V+ ++VAN GDSRAVL R
Sbjct: 95 WLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK 152
Query: 163 SENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIG 222
+ A LSVDH E+ +EA V+ G R+ G++ +SRSIG
Sbjct: 153 T---------ALPLSVDHKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIG 198
Query: 223 DVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSD 282
D YL KP +P P AV +++K +D LI ASDG+W+ ++D
Sbjct: 199 DRYL-KPSI----------IPDPEVTAV---------KRVKEDDC-LILASDGVWDVMTD 237
Query: 283 EAAVEIVSR 291
E A E+ +
Sbjct: 238 EEACEMARK 246
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 44/250 (17%)
Query: 45 ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAE-- 102
+ SML+ G+ +A + GVYDGHGG + + + + L ++E ++ + +
Sbjct: 41 SGSMLD--GRFDPQSAAHFFGVYDGHGGSQVANYCRERM--HLALAEEIAKEKPMLCDGD 96
Query: 103 -VIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRR 161
++K A FL + S P+ +VGS +V V+ ++VAN GDSRAVL R
Sbjct: 97 TWLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRG 154
Query: 162 VSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSI 221
+ A LSVDH E+ +EA V+ G R+ G++ +SRSI
Sbjct: 155 KT---------ALPLSVDHKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSI 200
Query: 222 GDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS 281
GD YL KP +P P AV +++K +D LI ASDG+W+ ++
Sbjct: 201 GDRYL-KPSI----------IPDPEVTAV---------KRVKEDDC-LILASDGVWDVMT 239
Query: 282 DEAAVEIVSR 291
DE A E+ +
Sbjct: 240 DEEACEMARK 249
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 44/250 (17%)
Query: 45 ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAE-- 102
+ SML+ G+ +A + GVYDGHGG + + + + L ++E ++ + +
Sbjct: 53 SGSMLD--GRFDPQSAAHFFGVYDGHGGSQVANYCRERM--HLALAEEIAKEKPMLCDGD 108
Query: 103 -VIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRR 161
++K A FL + S P+ +VGS +V V+ ++VAN GDSRAVL R
Sbjct: 109 TWLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRG 166
Query: 162 VSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSI 221
+ A LSVDH E+ +EA V+ G R+ G++ +SRSI
Sbjct: 167 KT---------ALPLSVDHKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSI 212
Query: 222 GDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS 281
GD YL KP +P P AV +++K +D LI ASDG+W+ ++
Sbjct: 213 GDRYL-KPSI----------IPDPEVTAV---------KRVKEDDC-LILASDGVWDVMT 251
Query: 282 DEAAVEIVSR 291
DE A E+ +
Sbjct: 252 DEEACEMARK 261
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 131 SVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKE 190
S + C+ V D L+VAN GDSRA+LG V E + V LS DHN E +
Sbjct: 199 SGATACVAHVDGVD-LHVANTGDSRAMLG--VQEEDGSWSAVT--LSNDHNAQNEREVER 253
Query: 191 VEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLK------------KPEFSRDHGFH 238
++ HP + V + R+ G++ R+ GDV K P+ D+ +
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 239 HFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIV 289
F P +TAEP + +L+ D FL+ A+DGLWE + + V IV
Sbjct: 312 KFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 131 SVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKE 190
S + C+ V D L+VAN GDSRA+LG V E + V LS DHN E +
Sbjct: 199 SGATACVAHVDGVD-LHVANTGDSRAMLG--VQEEDGSWSAVT--LSNDHNAQNERELQR 253
Query: 191 VEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLK------------KPEFSRDHGFH 238
++ HP + V + R+ G++ R+ GDV K P+ D+ +
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 239 HFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIV 289
F P +TAEP + +L+ D FL+ A+DGLWE + + V IV
Sbjct: 312 KFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 48/257 (18%)
Query: 43 VQANSMLEDQGQVFTSP--SATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQ---- 96
V ++S+L+ + +P SA + GVYDGHGG + + + + L E E+
Sbjct: 39 VSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVANYCRERMHLAL-TEEIVKEKPEFC 97
Query: 97 -GGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSR 155
G E KKA + F+ + + +VGS +V V+ ++VAN GDSR
Sbjct: 98 DGDTWQEKWKKALFNS---FMRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSR 154
Query: 156 AVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGII 215
AVL R K L LSVDH ++ +EA V+ G R+ G++
Sbjct: 155 AVLCR-----GKTPLA----LSVDHKPDRDDEAARIEAA----GGKVIRWNGA-RVFGVL 200
Query: 216 QVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSIL-IRKLKSNDLFLIFASD 274
+SRSIGD YL KP IP +P + +R++K +D LI ASD
Sbjct: 201 AMSRSIGDRYL-KPSV------------IP--------DPEVTSVRRVKEDDC-LILASD 238
Query: 275 GLWEQLSDEAAVEIVSR 291
GLW+ +++E ++ +
Sbjct: 239 GLWDVMTNEEVCDLARK 255
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 61 ATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLS--AEVIKKA---FDAT--EE 113
++ VYDGHGG E +++ + HL FL T E G + +K+A FDAT +E
Sbjct: 51 CSFFAVYDGHGGAEVAQYCSLHLPTFLK----TVEAYGRKEFEKALKEAFLGFDATLLQE 106
Query: 114 EFLHLVK------RSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRK 167
+ + +K A P S G +V ++ LYVAN GDSR V+ R N K
Sbjct: 107 KVIEELKVLSGDSAGSDAEPGKDS-GCTAVVALLHGKDLYVANAGDSRCVVCR----NGK 161
Query: 168 NMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLK 227
+ +S DH E E + + + + R+ G + +SR+IG
Sbjct: 162 AL-----EMSFDHK---PEDTVEYQRIEKAGGRVTLDG----RVNGGLNLSRAIG----- 204
Query: 228 KPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVE 287
DHG+ + +P + +++A P I + D F++ A DG+W ++ E V+
Sbjct: 205 ------DHGYKMNK-SLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQ 257
Query: 288 IV 289
V
Sbjct: 258 FV 259
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 67/313 (21%)
Query: 58 SPSAT-----YVGVYDGHGGPEASRFITRHLFPFL---------HISEFTTEQGGLSA-- 101
SPS T + GVYDGHGG + + + L L +S+ T +G
Sbjct: 57 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWD 116
Query: 102 EVIKKAFDATEEEFLHLVKR-----SWSARPQIAS--VGSCCLVGVIAKDVLYVANLGDS 154
+V F + E + R S +AS VGS +V ++ + V+N GDS
Sbjct: 117 KVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDS 176
Query: 155 RAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGI 214
RAVL R A LSVDH E+ +E + V+ +G R+ G+
Sbjct: 177 RAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQWQGA-RVFGV 222
Query: 215 IQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASD 274
+ +SRSIGD YLK + +P EP + D LI ASD
Sbjct: 223 LAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSREDECLILASD 261
Query: 275 GLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDIKRIQKGARR 329
GLW+ ++++ EI R + ++G Y + +QKG++
Sbjct: 262 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSK- 320
Query: 330 HFHDDITVVVIYL 342
D+I+++VI L
Sbjct: 321 ---DNISIIVIDL 330
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 128/322 (39%), Gaps = 85/322 (26%)
Query: 58 SPSATYV-----GVYDGHGGPEASRFITRHL---------------------------FP 85
SPS T++ GVYDGHGG + + + L +
Sbjct: 60 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 119
Query: 86 FLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDV 145
+ S F T G + + I +A + ++ L V +VGS +V ++
Sbjct: 120 KVFTSCFLTVDGEIEGK-IGRAVVGSSDKVLEAVASE--------TVGSTAVVALVCSSH 170
Query: 146 LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 205
+ V+N GDSRAVL R A LSVDH E+ +E + V+
Sbjct: 171 IVVSNCGDSRAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQW 217
Query: 206 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN 265
+G R+ G++ +SRSIGD YLK + +P EP +
Sbjct: 218 QGA-RVFGVLAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSRE 255
Query: 266 DLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDI 320
D LI ASDGLW+ ++++ EI R + ++G Y +
Sbjct: 256 DECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSM 315
Query: 321 KRIQKGARRHFHDDITVVVIYL 342
+QKG++ D+I+++VI L
Sbjct: 316 LALQKGSK----DNISIIVIDL 333
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 85/322 (26%)
Query: 58 SPSAT-----YVGVYDGHGGPEASRFITRHL---------------------------FP 85
SPS T + GVYDGHGG + + + L +
Sbjct: 43 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 102
Query: 86 FLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDV 145
+ S F T G + + I +A + ++ L V +VGS +V ++
Sbjct: 103 KVFTSCFLTVDGEIEGK-IGRAVVGSSDKVLEAVASE--------TVGSTAVVALVCSSH 153
Query: 146 LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 205
+ V+N GDSRAVL R A LSVDH E+ +E + V+
Sbjct: 154 IVVSNCGDSRAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQW 200
Query: 206 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN 265
+G R+ G++ +SRSIGD YLK + +P EP +
Sbjct: 201 QGA-RVFGVLAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSRE 238
Query: 266 DLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDI 320
D LI ASDGLW+ ++++ EI R + ++G Y +
Sbjct: 239 DECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSM 298
Query: 321 KRIQKGARRHFHDDITVVVIYL 342
+QKG++ D+I+++VI L
Sbjct: 299 LALQKGSK----DNISIIVIDL 316
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 85/322 (26%)
Query: 58 SPSAT-----YVGVYDGHGGPEASRFITRHL---------------------------FP 85
SPS T + GVYDGHGG + + + L +
Sbjct: 54 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 113
Query: 86 FLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDV 145
+ S F T G + + I +A + ++ L V +VGS +V ++
Sbjct: 114 KVFTSCFLTVDGEIEGK-IGRAVVGSSDKVLEAVASE--------TVGSTAVVALVCSSH 164
Query: 146 LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 205
+ V+N GDSRAVL R A LSVDH E+ +E + V+
Sbjct: 165 IVVSNCGDSRAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQW 211
Query: 206 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN 265
+G R+ G++ +SRSIGD YLK + +P EP +
Sbjct: 212 QGA-RVFGVLAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSRE 249
Query: 266 DLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDI 320
D LI ASDGLW+ ++++ EI R + ++G Y +
Sbjct: 250 DECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSM 309
Query: 321 KRIQKGARRHFHDDITVVVIYL 342
+QKG++ D+I+++VI L
Sbjct: 310 LALQKGSK----DNISIIVIDL 327
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 85/322 (26%)
Query: 58 SPSAT-----YVGVYDGHGGPEASRFITRHL---------------------------FP 85
SPS T + GVYDGHGG + + + L +
Sbjct: 58 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 117
Query: 86 FLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDV 145
+ S F T G + + I +A + ++ L V +VGS +V ++
Sbjct: 118 KVFTSCFLTVDGEIEGK-IGRAVVGSSDKVLEAVASE--------TVGSTAVVALVCSSH 168
Query: 146 LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 205
+ V+N GDSRAVL R A LSVDH E+ +E + V+
Sbjct: 169 IVVSNCGDSRAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQW 215
Query: 206 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN 265
+G R+ G++ +SRSIGD YLK + +P EP +
Sbjct: 216 QGA-RVFGVLAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSRE 253
Query: 266 DLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDI 320
D LI ASDGLW+ ++++ EI R + ++G Y +
Sbjct: 254 DECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSM 313
Query: 321 KRIQKGARRHFHDDITVVVIYL 342
+QKG++ D+I+++VI L
Sbjct: 314 LALQKGSK----DNISIIVIDL 331
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 85/322 (26%)
Query: 58 SPSAT-----YVGVYDGHGGPEASRFITRHL---------------------------FP 85
SPS T + GVYDGHGG + + + L +
Sbjct: 67 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 126
Query: 86 FLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDV 145
+ S F T G + + I +A + ++ L V +VGS +V ++
Sbjct: 127 KVFTSCFLTVDGEIEGK-IGRAVVGSSDKVLEAVASE--------TVGSTAVVALVCSSH 177
Query: 146 LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFS 205
+ V+N GDSRAVL R A LSVDH E+ +E + V+
Sbjct: 178 IVVSNCGDSRAVLFRGKE---------AMPLSVDHKPDREDEYARIE----NAGGKVIQW 224
Query: 206 RGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSN 265
+G R+ G++ +SRSIGD YLK + +P EP +
Sbjct: 225 QGA-RVFGVLAMSRSIGDRYLKP-----------YVIP----------EPEVTFMPRSRE 262
Query: 266 DLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIXXXXXXXXXXXXXXXXEMRYEDI 320
D LI ASDGLW+ ++++ EI R + ++G Y +
Sbjct: 263 DECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSM 322
Query: 321 KRIQKGARRHFHDDITVVVIYL 342
+QKG++ D+I+++VI L
Sbjct: 323 LALQKGSK----DNISIIVIDL 340
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 48/324 (14%)
Query: 50 EDQGQVFTSPSATYV-GVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAE-VIKKA 107
ED F S + ++ GV++G+ G + F+ + L L + + E V+ +A
Sbjct: 52 EDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQA 111
Query: 108 FDATEEEFLHLVKRSWSARPQIA-----------SVGSCCLVGVIAKDVLYVANLGDSRA 156
FD E FL + + + + + S G+ +V V+ + LYVAN+G +RA
Sbjct: 112 FDVVERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRA 171
Query: 157 VLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGII- 215
+L + + + +L+VDH E+ + L D I + GII
Sbjct: 172 LLCKSTVDG-----LQVTQLNVDHTTENEDELFRLSQLGLDAGKI--------KQVGIIC 218
Query: 216 --QVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSI-LIRKLKSNDLFLIFA 272
+ +R IGD +K +G+ L K + AEP I + L FL+
Sbjct: 219 GQESTRRIGDYKVK-------YGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLM 271
Query: 273 SDGLWEQLSDEAAVEIVSRNPRSGIXXXXXXXXXXXXXXXXEMRYEDIKRIQK------G 326
S+GL++ L EAA N + + +KRI G
Sbjct: 272 SEGLYKAL--EAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGG 329
Query: 327 ARRHF---HDDITVVVIYLDHPLG 347
R F H+D+T++V +PLG
Sbjct: 330 ERARFCPRHEDMTLLVRNFGYPLG 353
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 60 SATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLV 119
S ++ VYDGH G + +++ HL HI+ +G A ++ + FL +
Sbjct: 52 SWSFFAVYDGHAGSQVAKYCCEHLLD--HITNNQDFKGSAGAPSVENVKNGIRTGFLEID 109
Query: 120 K--RSWSARPQIASVGSCCLVGV-IAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERL 176
+ R S + A VGV I+ Y N GDSR +L R NRK
Sbjct: 110 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR----NRK-----VHFF 160
Query: 177 SVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHG 236
+ DH K L + S + R+ G + VSR++GD D+
Sbjct: 161 TQDH--------KPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDF---------DYK 203
Query: 237 FHHFRLPIPLKRAVMTAEPSIL-IRKLKSNDLFLIFASDGLWEQLSDEAAVEIV 289
H + P +++ EP + I + + +D F+I A DG+W+ + +E + V
Sbjct: 204 CVHGKGPT---EQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 60 SATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLV 119
S ++ VYDGH G + +++ HL HI+ +G A ++ + FL +
Sbjct: 52 SWSFFAVYDGHAGSQVAKYCCEHLLD--HITNNQDFKGSAGAPSVENVKNGIRTGFLEID 109
Query: 120 K--RSWSARPQIASVGSCCLVGV-IAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERL 176
+ R S + A VGV I+ Y N GDSR +L R NRK
Sbjct: 110 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR----NRK-----VHFF 160
Query: 177 SVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHG 236
+ DH K L + S + R+ G + VSR++GD D+
Sbjct: 161 TQDH--------KPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDF---------DYK 203
Query: 237 FHHFRLPIPLKRAVMTAEPSIL-IRKLKSNDLFLIFASDGLWEQLSDEAAVEIV 289
H + P +++ EP + I + + +D F+I A DG+W+ + +E + V
Sbjct: 204 CVHGKGPT---EQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 63 YVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 122
Y VYDGHGGP A+ F H+ I + ++ L ++ AF ++ F +
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKC--IMDLLPKEKNLET-LLTLAFLEIDKAFSSHAR-- 91
Query: 123 WSARPQIASVGSCCLVGVIAKDV-LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHN 181
SA + + G+ V ++ + L VA++GDSRA+L R+ K M +L++DH
Sbjct: 92 LSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRK----GKPM-----KLTIDH- 141
Query: 182 VGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFR 241
E + E E + + S G + G + ++RSIGD
Sbjct: 142 --TPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGD------------------ 181
Query: 242 LPIPLKRAVMTAEPSILIRKL-KSNDLFLIFASDGLWEQLSDEAAVEIVSR 291
+ LK + + AEP KL ++D FL+ +DG+ ++ + + V++
Sbjct: 182 --LDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ 230
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 63 YVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 122
Y VYDGHGGP A+ F H+ I + ++ L ++ AF ++ F +
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKC--IMDLLPKEKNLET-LLTLAFLEIDKAFSSHAR-- 205
Query: 123 WSARPQIASVGSCCLVGVIAKDV-LYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHN 181
SA + + G+ V ++ + L VA++GDSRA+L R+ K M +L++DH
Sbjct: 206 LSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRK----GKPM-----KLTIDH- 255
Query: 182 VGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFR 241
E + E E + + S G + G + ++RSIGD
Sbjct: 256 --TPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGD------------------ 295
Query: 242 LPIPLKRAVMTAEPSILIRKL-KSNDLFLIFASDGLWEQLSDEAAVEIVSR 291
+ LK + + AEP KL ++D FL+ +DG+ ++ + + V++
Sbjct: 296 --LDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ 344
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 132/343 (38%), Gaps = 67/343 (19%)
Query: 50 EDQGQVFTSPSATYV-GVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAE-VIKKA 107
ED F S + ++ GV++G+ G + F+ + L L + + E V+ +A
Sbjct: 52 EDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQA 111
Query: 108 FDATEEEFLHLVKRSWSAR-----------------PQIASV-------------GSCCL 137
FD E FL + + + + PQ + G+ +
Sbjct: 112 FDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAV 171
Query: 138 VGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPD 197
V V+ + LYVAN+G +RA+L + + + +L+VDH E+ + L D
Sbjct: 172 VAVLLNNKLYVANVGTNRALLCKSTVDG-----LQVTQLNVDHTTENEDELFRLSQLGLD 226
Query: 198 DSHIVVFSRGVWRIKGII---QVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAE 254
I + GII + +R IGD +K +G+ L K + AE
Sbjct: 227 AGKI--------KQVGIICGQESTRRIGDYKVK-------YGYTDIDLLSAAKSKPIIAE 271
Query: 255 PSI-LIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIXXXXXXXXXXXXXXXX 313
P I + L FL+ S+GL++ L EAA N
Sbjct: 272 PEIHGAQPLDGVTGFLVLMSEGLYKAL--EAAHGPGQANQEIAAMIDTEFAKQTSLDAVA 329
Query: 314 EMRYEDIKRIQK------GARRHF---HDDITVVVIYLDHPLG 347
+ + +KRI G R F H+D+T++V +PLG
Sbjct: 330 QAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLG 372
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 126/330 (38%), Gaps = 66/330 (20%)
Query: 65 GVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAE-VIKKAFDATEEEFLHLVKRSW 123
GV++G+ G + F+ + L L + + E V+ +AFD E FL + +
Sbjct: 66 GVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDAL 125
Query: 124 SAR-----------------PQIASV-------------GSCCLVGVIAKDVLYVANLGD 153
+ + PQ + G+ +V V+ + LYVAN+G
Sbjct: 126 AEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGT 185
Query: 154 SRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKG 213
+RA+L + + + +L+VDH E+ + L D I + G
Sbjct: 186 NRALLCKSTVDG-----LQVTQLNVDHTTENEDELFRLSQLGLDAGKI--------KQVG 232
Query: 214 II---QVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSI-LIRKLKSNDLFL 269
II + +R IGD +K +G+ L K + AEP I + L FL
Sbjct: 233 IICGQESTRRIGDYKVK-------YGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFL 285
Query: 270 IFASDGLWEQLSDEAAVEIVSRNPRSGIXXXXXXXXXXXXXXXXEMRYEDIKRIQK---- 325
+ S+GL++ L EAA N + + +KRI
Sbjct: 286 VLMSEGLYKAL--EAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFA 343
Query: 326 --GARRHF---HDDITVVVIYLDHPLGTSS 350
G R F H+D+T++V +PLG S
Sbjct: 344 SGGERARFCPRHEDMTLLVRNFGYPLGEMS 373
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 41/237 (17%)
Query: 62 TYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGG------LSAEVIKKAFDATEEEF 115
++ VYDGH G + + + HL + +E G LS E +K +
Sbjct: 56 SFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKI 115
Query: 116 LHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAER 175
++ R + GS + +I+ +Y N GDSRAVL R
Sbjct: 116 DEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR--------------- 160
Query: 176 LSVDHNVGVEEVRKEVEALHPDDSHIVVFSRG---VWRIKGIIQVSRSIGDVYLKKPEFS 232
N V ++ + +P + + + G + R+ G + VSR++GD K +
Sbjct: 161 -----NGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGK 215
Query: 233 RDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIV 289
P ++ V + EP + D F+I A DG+W+ +S+E E V
Sbjct: 216 G-----------PTEQLV-SPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYV 260
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 134 SCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV--EEVR--- 188
S + V+AK + V +LGDSR G + E L+VDH E++R
Sbjct: 138 STSVTAVLAKGFVAVGHLGDSRIAXGVETPNG-----LNCEFLTVDHKPDXPHEKLRIXR 192
Query: 189 --KEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPL 246
VE LH ++ F RG G +S G+ + ++SR G L
Sbjct: 193 NGGSVEYLHNHNNK--PFIRG-----GDFSFRKSRGEQPXQL-QYSRAFGGKD------L 238
Query: 247 KRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIV------SRNPRSGI 297
K ++ +P + + ++ I A+DGLW+ S AVEI RNP +
Sbjct: 239 KXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQAL 295
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 88 HISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLY 147
H++ T Q LSA+ + + ++F +++++ S + SVGS ++ +I + LY
Sbjct: 112 HVATKTAIQLHLSADGMNQY--EISQQFENVLQKLDSLNNAL-SVGSSAVLALIHRSHLY 168
Query: 148 VANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNV 182
+ N+G+ RA+L + + + L V + LSVDHN+
Sbjct: 169 LGNIGNCRALLCK---TDEHDTLTVTQ-LSVDHNL 199
>pdb|3EZK|A Chain A, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|B Chain B, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|C Chain C, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|D Chain D, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|E Chain E, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
Length = 577
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 234 DHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQL 280
DHGFH F+ P P ++ + T + S R + L +I +D +WEQ+
Sbjct: 381 DHGFHQFKKPEPDRKYIATLDCS-EGRGQDYHALHIIDVTDDVWEQV 426
>pdb|3CPE|A Chain A, Crystal Structure Of T4 Gp17
Length = 592
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 234 DHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQL 280
DHGFH F+ P P ++ + T + S R + L +I +D +WEQ+
Sbjct: 406 DHGFHQFKKPEPDRKYIATLDCS-EGRGQDYHALHIIDVTDDVWEQV 451
>pdb|2VGA|A Chain A, The Structure Of Vaccinia Virus A41
Length = 207
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 47 SMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKK 106
SM+E Q + TYV +YD G I +H P L ++ T + G +++KK
Sbjct: 151 SMIELQSDYCVNDVTTYVKIYDECGN------IKQHSIPTLR--DYFTTKNGQPRKILKK 202
Query: 107 AFD 109
FD
Sbjct: 203 KFD 205
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 254 EPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVE 287
EP++ +R+ ++ D +L+ SDGL + +SDE +E
Sbjct: 192 EPTLTMREARAGDRYLL-CSDGLSDPVSDETILE 224
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 59 PSATYVGVYDGHGGPEASRFITRHLFPFL-HISEFTTEQG-----GLSAEVIKK 106
P+ V+DGH G S++ +H L +SEFT + L AE+I+K
Sbjct: 41 PNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEFTFAEVKKACLSLDAEIIRK 94
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 254 EPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVE 287
EP++ R+ ++ D +L+ SDGL + +SDE +E
Sbjct: 169 EPTLTXREARAGDRYLL-CSDGLSDPVSDETILE 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,401,421
Number of Sequences: 62578
Number of extensions: 395870
Number of successful extensions: 906
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 46
length of query: 384
length of database: 14,973,337
effective HSP length: 101
effective length of query: 283
effective length of database: 8,652,959
effective search space: 2448787397
effective search space used: 2448787397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)