Query 016734
Match_columns 384
No_of_seqs 311 out of 2222
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:33:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016734.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016734hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h00_A Methyltransferase 10 do 100.0 1.5E-37 5.2E-42 291.4 23.8 242 48-345 2-253 (254)
2 3evz_A Methyltransferase; NYSG 99.9 9E-27 3.1E-31 214.0 19.1 215 51-346 5-221 (230)
3 2b3t_A Protein methyltransfera 99.9 9E-25 3.1E-29 207.9 20.9 194 70-342 75-274 (276)
4 1nv8_A HEMK protein; class I a 99.9 1.3E-24 4.4E-29 209.5 17.5 189 70-343 88-281 (284)
5 4dzr_A Protein-(glutamine-N5) 99.9 1.7E-23 5.8E-28 188.1 8.1 200 77-344 1-205 (215)
6 3lpm_A Putative methyltransfer 99.7 3.2E-17 1.1E-21 154.2 16.7 167 116-345 50-219 (259)
7 2ozv_A Hypothetical protein AT 99.7 7.9E-17 2.7E-21 152.5 16.8 171 115-346 36-213 (260)
8 3q87_B N6 adenine specific DNA 99.7 6.2E-16 2.1E-20 136.9 17.7 152 82-337 2-155 (170)
9 1o54_A SAM-dependent O-methylt 99.6 6.2E-15 2.1E-19 139.7 17.6 171 68-334 58-243 (277)
10 2fhp_A Methylase, putative; al 99.6 2.3E-15 7.8E-20 132.6 11.9 95 70-176 9-103 (187)
11 3p9n_A Possible methyltransfer 99.6 1.3E-14 4.6E-19 129.4 14.2 94 71-176 9-102 (189)
12 3tm4_A TRNA (guanine N2-)-meth 99.6 6.5E-14 2.2E-18 139.5 19.5 157 89-335 201-357 (373)
13 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3.8E-14 1.3E-18 129.0 14.7 165 80-331 19-183 (214)
14 3tma_A Methyltransferase; thum 99.6 1E-13 3.6E-18 136.3 18.2 163 89-340 186-349 (354)
15 1dus_A MJ0882; hypothetical pr 99.5 2.4E-13 8.3E-18 119.4 17.9 161 76-333 24-185 (194)
16 4dcm_A Ribosomal RNA large sub 99.5 2.2E-13 7.6E-18 136.1 17.7 153 73-315 191-345 (375)
17 1uwv_A 23S rRNA (uracil-5-)-me 99.5 2.3E-13 7.7E-18 138.2 17.8 91 74-177 253-344 (433)
18 3dmg_A Probable ribosomal RNA 99.5 4.2E-13 1.5E-17 134.4 18.5 152 75-316 198-352 (381)
19 2igt_A SAM dependent methyltra 99.5 3.5E-13 1.2E-17 132.6 17.3 173 72-323 116-297 (332)
20 3kr9_A SAM-dependent methyltra 99.5 1.9E-13 6.4E-18 128.0 13.5 125 116-327 16-140 (225)
21 3e05_A Precorrin-6Y C5,15-meth 99.5 7E-13 2.4E-17 119.4 15.9 128 115-330 40-167 (204)
22 3gnl_A Uncharacterized protein 99.5 5.5E-13 1.9E-17 126.2 15.8 125 116-327 22-146 (244)
23 1ws6_A Methyltransferase; stru 99.5 5.4E-14 1.9E-18 121.8 8.0 91 70-176 7-97 (171)
24 1o9g_A RRNA methyltransferase; 99.5 8.9E-14 3E-18 129.7 9.6 48 115-162 51-100 (250)
25 3eey_A Putative rRNA methylase 99.5 1.4E-12 4.6E-17 116.5 16.5 116 116-304 23-139 (197)
26 2esr_A Methyltransferase; stru 99.5 1.8E-13 6.2E-18 120.2 10.1 87 78-176 4-90 (177)
27 3dlc_A Putative S-adenosyl-L-m 99.5 1.4E-12 4.8E-17 116.9 15.5 59 117-177 45-103 (219)
28 3lec_A NADB-rossmann superfami 99.5 1.5E-12 5E-17 122.3 16.2 124 116-327 22-146 (230)
29 2frn_A Hypothetical protein PH 99.4 1.9E-12 6.7E-17 123.5 17.2 119 116-323 126-250 (278)
30 2fpo_A Methylase YHHF; structu 99.4 3.6E-13 1.2E-17 122.3 11.5 93 71-176 20-112 (202)
31 3mti_A RRNA methylase; SAM-dep 99.4 1.6E-12 5.3E-17 115.0 15.3 57 115-175 22-78 (185)
32 1jsx_A Glucose-inhibited divis 99.4 1.3E-12 4.5E-17 117.3 14.6 143 87-328 44-186 (207)
33 1l3i_A Precorrin-6Y methyltran 99.4 3.3E-12 1.1E-16 111.9 16.9 147 85-330 13-159 (192)
34 1wy7_A Hypothetical protein PH 99.4 1.1E-12 3.8E-17 117.9 14.1 121 115-324 49-169 (207)
35 3grz_A L11 mtase, ribosomal pr 99.4 2.2E-12 7.6E-17 116.0 15.7 123 116-329 61-184 (205)
36 2ift_A Putative methylase HI07 99.4 4.6E-13 1.6E-17 121.4 10.9 94 71-176 19-113 (201)
37 2b78_A Hypothetical protein SM 99.4 2.7E-12 9.4E-17 128.4 16.7 161 73-318 179-346 (385)
38 3g89_A Ribosomal RNA small sub 99.4 1.4E-12 4.6E-17 123.0 13.7 146 115-345 80-229 (249)
39 2nxc_A L11 mtase, ribosomal pr 99.4 3.1E-12 1.1E-16 120.4 16.0 139 88-329 104-243 (254)
40 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.2E-12 4.2E-17 119.8 12.8 161 81-330 17-179 (213)
41 2yxd_A Probable cobalt-precorr 99.4 9.7E-12 3.3E-16 108.3 17.4 137 89-328 18-154 (183)
42 3gdh_A Trimethylguanosine synt 99.4 2.5E-12 8.7E-17 118.5 14.4 150 116-340 79-228 (241)
43 1xdz_A Methyltransferase GIDB; 99.4 9.4E-12 3.2E-16 115.4 17.9 170 84-342 43-216 (240)
44 2yx1_A Hypothetical protein MJ 99.4 7E-12 2.4E-16 123.1 17.2 133 116-345 196-332 (336)
45 4fsd_A Arsenic methyltransfera 99.4 4.2E-12 1.5E-16 126.3 15.7 183 69-329 25-250 (383)
46 3mb5_A SAM-dependent methyltra 99.4 3.6E-12 1.2E-16 118.4 13.9 128 115-331 93-223 (255)
47 2pt6_A Spermidine synthase; tr 99.4 4.7E-12 1.6E-16 123.9 15.3 97 71-176 80-179 (321)
48 3kkz_A Uncharacterized protein 99.4 1.3E-11 4.6E-16 115.5 17.5 79 89-177 28-106 (267)
49 3f4k_A Putative methyltransfer 99.4 1.9E-11 6.6E-16 113.0 18.3 78 89-176 28-105 (257)
50 1nkv_A Hypothetical protein YJ 99.4 1.5E-11 5.2E-16 113.7 17.1 77 89-176 19-95 (256)
51 3ldu_A Putative methylase; str 99.4 9.6E-12 3.3E-16 124.7 16.2 78 89-176 178-293 (385)
52 3a27_A TYW2, uncharacterized p 99.4 1.2E-11 4.2E-16 117.7 16.0 89 72-176 88-178 (272)
53 3ocj_A Putative exported prote 99.4 6.9E-12 2.3E-16 120.3 14.4 61 115-176 118-179 (305)
54 3dtn_A Putative methyltransfer 99.4 3.5E-11 1.2E-15 109.9 18.2 77 89-177 26-102 (234)
55 2yvl_A TRMI protein, hypotheti 99.4 1.7E-11 5.8E-16 112.8 16.2 166 71-331 44-216 (248)
56 3c0k_A UPF0064 protein YCCW; P 99.4 2.3E-11 7.8E-16 121.7 18.3 137 116-323 221-363 (396)
57 3hm2_A Precorrin-6Y C5,15-meth 99.4 2E-11 6.8E-16 106.4 15.6 123 115-324 25-147 (178)
58 3njr_A Precorrin-6Y methylase; 99.3 8.9E-11 3.1E-15 106.8 20.6 120 115-324 55-174 (204)
59 2f8l_A Hypothetical protein LM 99.3 9E-12 3.1E-16 122.2 14.6 137 115-322 130-278 (344)
60 2pjd_A Ribosomal RNA small sub 99.3 1.5E-11 5.1E-16 120.6 15.5 150 74-316 166-315 (343)
61 4gek_A TRNA (CMO5U34)-methyltr 99.3 6.4E-11 2.2E-15 112.4 19.2 61 116-177 71-133 (261)
62 3ldg_A Putative uncharacterize 99.3 2.6E-11 8.8E-16 121.7 17.3 79 89-177 177-293 (384)
63 3v97_A Ribosomal RNA large sub 99.3 1.6E-11 5.3E-16 132.0 16.8 135 116-323 540-675 (703)
64 3k0b_A Predicted N6-adenine-sp 99.3 1.6E-11 5.5E-16 123.4 15.7 78 89-176 184-299 (393)
65 3jwg_A HEN1, methyltransferase 99.3 3.4E-11 1.2E-15 109.1 16.4 84 83-176 6-93 (219)
66 3adn_A Spermidine synthase; am 99.3 2.5E-11 8.6E-16 117.4 15.8 172 72-329 48-226 (294)
67 2ih2_A Modification methylase 99.3 2.4E-12 8.3E-17 128.2 8.8 152 93-322 26-186 (421)
68 1xj5_A Spermidine synthase 1; 99.3 4.6E-11 1.6E-15 117.7 17.3 98 70-176 83-183 (334)
69 3bzb_A Uncharacterized protein 99.3 2.7E-11 9.2E-16 115.6 14.8 97 35-162 26-126 (281)
70 3b3j_A Histone-arginine methyl 99.3 2.3E-12 7.8E-17 132.8 7.8 93 71-177 125-217 (480)
71 3jwh_A HEN1; methyltransferase 99.3 4.6E-11 1.6E-15 108.2 15.3 78 89-176 12-93 (217)
72 3k6r_A Putative transferase PH 99.3 4.9E-11 1.7E-15 114.8 16.2 90 72-177 94-185 (278)
73 3dh0_A SAM dependent methyltra 99.3 1.3E-10 4.6E-15 104.8 18.2 132 115-330 37-181 (219)
74 2qm3_A Predicted methyltransfe 99.3 4.9E-11 1.7E-15 118.5 16.2 130 116-329 173-308 (373)
75 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.7E-11 5.9E-16 113.1 11.9 130 116-320 35-166 (218)
76 3e23_A Uncharacterized protein 99.3 2.8E-10 9.6E-15 102.4 19.5 139 116-345 44-201 (211)
77 3bus_A REBM, methyltransferase 99.3 2.9E-10 9.9E-15 106.2 19.9 60 115-176 61-120 (273)
78 4dmg_A Putative uncharacterize 99.3 3.2E-11 1.1E-15 121.3 14.1 131 116-323 215-350 (393)
79 4htf_A S-adenosylmethionine-de 99.3 3E-10 1E-14 107.2 19.5 58 116-176 69-126 (285)
80 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.4E-10 4.7E-15 107.4 16.5 128 115-331 96-225 (258)
81 3bwc_A Spermidine synthase; SA 99.3 1.5E-10 5.1E-15 112.0 17.4 175 72-330 60-240 (304)
82 1wxx_A TT1595, hypothetical pr 99.3 4.8E-11 1.6E-15 118.9 14.1 135 116-323 210-349 (382)
83 1inl_A Spermidine synthase; be 99.2 1E-10 3.6E-15 112.8 15.5 172 72-329 55-233 (296)
84 3sm3_A SAM-dependent methyltra 99.2 1.6E-10 5.4E-15 104.7 15.8 58 116-176 31-92 (235)
85 1yb2_A Hypothetical protein TA 99.2 6E-11 2E-15 112.4 13.5 129 115-333 110-240 (275)
86 3hem_A Cyclopropane-fatty-acyl 99.2 3.4E-10 1.2E-14 108.1 18.8 60 115-176 72-131 (302)
87 1ve3_A Hypothetical protein PH 99.2 2E-10 6.7E-15 103.9 16.2 56 116-176 39-94 (227)
88 2as0_A Hypothetical protein PH 99.2 3.8E-11 1.3E-15 120.0 12.4 115 116-301 218-332 (396)
89 1ne2_A Hypothetical protein TA 99.2 6.3E-11 2.2E-15 106.2 12.6 53 115-175 51-103 (200)
90 1y8c_A S-adenosylmethionine-de 99.2 3.4E-10 1.2E-14 103.2 17.7 74 91-176 20-93 (246)
91 3m33_A Uncharacterized protein 99.2 1E-10 3.5E-15 107.2 13.8 139 82-328 26-165 (226)
92 3dr5_A Putative O-methyltransf 99.2 8.1E-11 2.8E-15 108.8 13.1 80 86-176 37-118 (221)
93 3g2m_A PCZA361.24; SAM-depende 99.2 1.5E-10 5.2E-15 110.3 15.1 58 117-177 84-143 (299)
94 3lcc_A Putative methyl chlorid 99.2 1.2E-10 4.1E-15 106.8 13.8 131 116-330 67-207 (235)
95 3mgg_A Methyltransferase; NYSG 99.2 3E-10 1E-14 106.4 16.7 60 115-176 37-96 (276)
96 3gu3_A Methyltransferase; alph 99.2 2.8E-10 9.7E-15 107.9 16.7 75 92-177 7-82 (284)
97 3v97_A Ribosomal RNA large sub 99.2 3.7E-10 1.3E-14 121.4 19.0 79 89-177 173-293 (703)
98 2o57_A Putative sarcosine dime 99.2 1.1E-09 3.7E-14 103.8 19.6 74 92-176 64-141 (297)
99 1vl5_A Unknown conserved prote 99.2 9.8E-10 3.3E-14 102.2 18.9 58 115-176 37-94 (260)
100 3ujc_A Phosphoethanolamine N-m 99.2 4.9E-10 1.7E-14 103.5 16.8 58 115-177 55-112 (266)
101 3vc1_A Geranyl diphosphate 2-C 99.2 5.1E-10 1.8E-14 107.6 17.2 61 115-177 117-177 (312)
102 3ntv_A MW1564 protein; rossman 99.2 2.6E-10 9E-15 105.3 14.6 60 116-176 72-131 (232)
103 1ixk_A Methyltransferase; open 99.2 2.2E-10 7.4E-15 111.4 13.7 148 115-324 118-269 (315)
104 3cgg_A SAM-dependent methyltra 99.2 6E-10 2.1E-14 97.6 15.3 127 116-330 47-175 (195)
105 3u81_A Catechol O-methyltransf 99.2 5.4E-10 1.9E-14 102.0 15.5 75 89-176 44-119 (221)
106 1kpg_A CFA synthase;, cyclopro 99.2 1.3E-09 4.5E-14 102.8 18.5 59 115-175 64-122 (287)
107 3bt7_A TRNA (uracil-5-)-methyl 99.2 1.1E-10 3.8E-15 115.8 11.6 88 75-176 182-270 (369)
108 3d2l_A SAM-dependent methyltra 99.2 1.4E-09 4.7E-14 99.3 18.0 54 117-176 35-88 (243)
109 2ex4_A Adrenal gland protein A 99.2 3.4E-10 1.2E-14 104.2 14.1 133 115-330 79-225 (241)
110 3tr6_A O-methyltransferase; ce 99.2 2.1E-10 7.2E-15 104.3 12.4 75 89-176 50-125 (225)
111 2fk8_A Methoxy mycolic acid sy 99.2 7.3E-10 2.5E-14 106.3 16.8 60 115-176 90-149 (318)
112 1fbn_A MJ fibrillarin homologu 99.2 1.4E-09 4.9E-14 99.9 18.0 59 115-177 74-132 (230)
113 3g07_A 7SK snRNA methylphospha 99.2 1.4E-10 4.9E-15 110.9 11.4 49 115-163 46-94 (292)
114 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.8E-10 2E-14 102.5 14.9 58 116-177 78-136 (233)
115 3duw_A OMT, O-methyltransferas 99.1 7.6E-10 2.6E-14 100.6 15.2 60 116-176 59-119 (223)
116 2okc_A Type I restriction enzy 99.1 3E-10 1E-14 115.4 13.8 61 115-176 171-245 (445)
117 3h2b_A SAM-dependent methyltra 99.1 1.4E-09 4.9E-14 97.0 16.6 132 116-337 42-188 (203)
118 2jjq_A Uncharacterized RNA met 99.1 2.2E-10 7.5E-15 116.3 12.3 88 72-176 258-346 (425)
119 3m70_A Tellurite resistance pr 99.1 1.5E-09 5.3E-14 102.4 17.4 56 116-176 121-176 (286)
120 1i9g_A Hypothetical protein RV 99.1 6E-10 2.1E-14 104.7 14.4 130 115-331 99-231 (280)
121 3ajd_A Putative methyltransfer 99.1 5.6E-10 1.9E-14 106.1 14.2 145 115-321 83-231 (274)
122 3l8d_A Methyltransferase; stru 99.1 1.2E-09 4.2E-14 99.7 16.1 142 92-333 41-203 (242)
123 3m6w_A RRNA methylase; rRNA me 99.1 2.9E-10 9.8E-15 116.8 12.9 145 115-321 101-249 (464)
124 2gpy_A O-methyltransferase; st 99.1 5.5E-10 1.9E-14 102.5 13.5 60 116-176 55-114 (233)
125 3g5l_A Putative S-adenosylmeth 99.1 8.3E-10 2.8E-14 102.1 14.7 56 115-176 44-99 (253)
126 1iy9_A Spermidine synthase; ro 99.1 6.9E-10 2.3E-14 106.0 14.4 136 115-329 75-217 (275)
127 2r3s_A Uncharacterized protein 99.1 1.6E-09 5.3E-14 104.5 16.9 61 115-177 165-225 (335)
128 2vdv_E TRNA (guanine-N(7)-)-me 99.1 8.6E-10 2.9E-14 102.6 14.2 61 115-177 49-117 (246)
129 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.9E-09 6.4E-14 99.2 16.4 130 115-329 93-237 (254)
130 3bkx_A SAM-dependent methyltra 99.1 9.8E-10 3.3E-14 102.7 14.6 60 115-175 43-109 (275)
131 2b2c_A Spermidine synthase; be 99.1 3.2E-10 1.1E-14 110.7 11.6 170 72-328 73-249 (314)
132 1qzz_A RDMB, aclacinomycin-10- 99.1 2.3E-09 7.8E-14 105.2 17.9 60 115-176 182-241 (374)
133 2fyt_A Protein arginine N-meth 99.1 9.5E-10 3.3E-14 108.0 14.9 60 115-177 64-123 (340)
134 2avd_A Catechol-O-methyltransf 99.1 4.8E-10 1.6E-14 102.2 11.8 75 89-176 55-130 (229)
135 3pfg_A N-methyltransferase; N, 99.1 1.3E-09 4.4E-14 101.5 14.9 53 116-177 51-103 (263)
136 1ri5_A MRNA capping enzyme; me 99.1 1.8E-09 6.2E-14 101.5 15.8 61 115-177 64-124 (298)
137 3tfw_A Putative O-methyltransf 99.1 1.2E-09 4.1E-14 102.1 14.2 60 116-176 64-124 (248)
138 1g8a_A Fibrillarin-like PRE-rR 99.1 7.4E-09 2.5E-13 94.4 19.1 59 115-177 73-132 (227)
139 3dou_A Ribosomal RNA large sub 99.1 7.9E-10 2.7E-14 99.9 12.4 156 115-348 25-185 (191)
140 3e8s_A Putative SAM dependent 99.1 1E-09 3.4E-14 98.7 13.0 41 116-158 53-93 (227)
141 1xxl_A YCGJ protein; structura 99.1 3.4E-09 1.2E-13 97.6 16.9 58 115-176 21-78 (239)
142 3r0q_C Probable protein argini 99.1 7.1E-10 2.4E-14 110.3 13.1 59 115-176 63-121 (376)
143 3q7e_A Protein arginine N-meth 99.1 8.7E-10 3E-14 108.6 13.6 59 116-177 67-125 (349)
144 3c3p_A Methyltransferase; NP_9 99.1 1.1E-09 3.8E-14 98.9 13.2 75 89-176 42-117 (210)
145 3ofk_A Nodulation protein S; N 99.1 4.2E-09 1.4E-13 94.9 16.9 140 115-341 51-200 (216)
146 1g6q_1 HnRNP arginine N-methyl 99.1 1.2E-09 4.2E-14 106.5 14.3 59 116-177 39-97 (328)
147 2h1r_A Dimethyladenosine trans 99.1 3E-10 1E-14 109.8 9.7 70 94-176 30-99 (299)
148 3ckk_A TRNA (guanine-N(7)-)-me 99.1 9.6E-10 3.3E-14 102.5 12.8 60 115-176 46-111 (235)
149 3tqs_A Ribosomal RNA small sub 99.1 4.7E-10 1.6E-14 106.5 10.8 71 93-178 16-86 (255)
150 3m4x_A NOL1/NOP2/SUN family pr 99.1 3.3E-10 1.1E-14 116.0 10.4 148 115-323 105-256 (456)
151 2plw_A Ribosomal RNA methyltra 99.1 3.6E-09 1.2E-13 94.3 15.8 170 116-345 23-197 (201)
152 3bkw_A MLL3908 protein, S-aden 99.1 3.7E-09 1.3E-13 96.4 15.9 55 115-176 43-98 (243)
153 2frx_A Hypothetical protein YE 99.1 1.3E-09 4.4E-14 112.3 14.0 143 115-321 117-266 (479)
154 3ou2_A SAM-dependent methyltra 99.0 1.5E-08 5.1E-13 90.7 18.8 53 116-176 47-99 (218)
155 2r6z_A UPF0341 protein in RSP 99.0 3.4E-11 1.2E-15 114.4 1.4 58 116-176 84-148 (258)
156 3thr_A Glycine N-methyltransfe 99.0 3.8E-09 1.3E-13 99.7 15.5 75 89-175 40-117 (293)
157 2b25_A Hypothetical protein; s 99.0 6.8E-09 2.3E-13 101.0 17.7 62 115-177 105-177 (336)
158 1zq9_A Probable dimethyladenos 99.0 8.4E-10 2.9E-14 105.8 11.1 72 94-177 16-87 (285)
159 2y1w_A Histone-arginine methyl 99.0 2.8E-09 9.4E-14 104.8 15.0 75 91-177 35-109 (348)
160 1mjf_A Spermidine synthase; sp 99.0 2.2E-09 7.6E-14 102.6 14.0 58 115-175 75-142 (281)
161 2p7i_A Hypothetical protein; p 99.0 4.5E-09 1.5E-13 95.6 15.1 53 116-176 43-95 (250)
162 3uwp_A Histone-lysine N-methyl 99.0 1.2E-09 4E-14 110.7 12.2 62 115-177 173-242 (438)
163 2o07_A Spermidine synthase; st 99.0 2.2E-09 7.5E-14 104.1 13.6 61 115-176 95-158 (304)
164 2pbf_A Protein-L-isoaspartate 99.0 3E-09 1E-13 96.9 13.7 94 71-176 47-149 (227)
165 2xvm_A Tellurite resistance pr 99.0 5.5E-09 1.9E-13 92.2 15.0 57 116-176 33-89 (199)
166 3g5t_A Trans-aconitate 3-methy 99.0 4.6E-09 1.6E-13 100.0 15.5 62 115-177 36-99 (299)
167 3r3h_A O-methyltransferase, SA 99.0 4.1E-10 1.4E-14 105.3 7.9 75 89-176 46-121 (242)
168 3gru_A Dimethyladenosine trans 99.0 8.8E-10 3E-14 106.9 10.4 70 93-177 37-106 (295)
169 1tw3_A COMT, carminomycin 4-O- 99.0 7.2E-09 2.4E-13 101.2 16.9 60 115-176 183-242 (360)
170 1sui_A Caffeoyl-COA O-methyltr 99.0 1.8E-09 6E-14 101.3 12.0 75 89-176 65-140 (247)
171 1x19_A CRTF-related protein; m 99.0 8.2E-09 2.8E-13 101.1 17.2 61 115-177 190-250 (359)
172 3ll7_A Putative methyltransfer 99.0 1.9E-10 6.4E-15 116.4 5.4 57 116-176 94-152 (410)
173 3axs_A Probable N(2),N(2)-dime 99.0 1.1E-09 3.9E-14 110.0 10.9 60 116-176 53-114 (392)
174 3cbg_A O-methyltransferase; cy 99.0 2E-09 6.9E-14 99.4 11.7 75 89-176 58-133 (232)
175 1ej0_A FTSJ; methyltransferase 99.0 5.4E-09 1.9E-13 89.5 13.5 153 115-344 22-178 (180)
176 1wzn_A SAM-dependent methyltra 99.0 8.3E-09 2.8E-13 95.1 15.6 72 94-176 26-97 (252)
177 2yxl_A PH0851 protein, 450AA l 99.0 4.5E-09 1.5E-13 107.0 15.1 147 116-323 260-412 (450)
178 3c3y_A Pfomt, O-methyltransfer 99.0 2.7E-09 9.2E-14 99.1 12.2 60 116-176 71-131 (237)
179 2kw5_A SLR1183 protein; struct 99.0 4.9E-09 1.7E-13 93.4 13.3 54 118-176 32-85 (202)
180 1nt2_A Fibrillarin-like PRE-rR 99.0 3.7E-08 1.3E-12 90.0 19.2 57 116-176 58-114 (210)
181 3ccf_A Cyclopropane-fatty-acyl 99.0 8.8E-09 3E-13 96.9 15.4 53 115-176 57-109 (279)
182 3dli_A Methyltransferase; PSI- 99.0 4.6E-09 1.6E-13 96.6 13.2 42 115-158 41-82 (240)
183 1sqg_A SUN protein, FMU protei 99.0 2.4E-09 8.1E-14 108.3 12.1 146 115-321 246-394 (429)
184 3hnr_A Probable methyltransfer 99.0 7.3E-09 2.5E-13 93.4 13.9 54 115-176 45-98 (220)
185 2p35_A Trans-aconitate 2-methy 99.0 8E-09 2.7E-13 95.3 14.4 55 115-176 33-87 (259)
186 3fzg_A 16S rRNA methylase; met 99.0 2.6E-09 9E-14 97.8 10.9 55 116-171 50-104 (200)
187 2qfm_A Spermine synthase; sper 99.0 3.4E-09 1.2E-13 105.5 12.6 177 71-327 154-339 (364)
188 2dul_A N(2),N(2)-dimethylguano 99.0 1E-09 3.6E-14 109.7 9.0 59 116-176 48-121 (378)
189 3gjy_A Spermidine synthase; AP 99.0 3.8E-09 1.3E-13 103.5 12.7 136 116-330 90-228 (317)
190 3mcz_A O-methyltransferase; ad 99.0 1.4E-08 4.9E-13 98.8 16.6 60 116-177 180-239 (352)
191 3gwz_A MMCR; methyltransferase 99.0 3.2E-08 1.1E-12 97.7 19.2 60 115-176 202-261 (369)
192 2hnk_A SAM-dependent O-methylt 99.0 4.9E-09 1.7E-13 96.7 12.3 60 116-176 61-121 (239)
193 2pxx_A Uncharacterized protein 98.9 1.4E-08 4.8E-13 90.5 14.7 132 116-322 43-175 (215)
194 4df3_A Fibrillarin-like rRNA/T 98.9 2E-08 6.7E-13 94.3 16.3 132 115-331 77-218 (233)
195 1qam_A ERMC' methyltransferase 98.9 2.5E-09 8.6E-14 100.2 9.9 56 115-176 30-85 (244)
196 3lbf_A Protein-L-isoaspartate 98.9 1.6E-08 5.5E-13 90.7 14.8 84 76-176 51-134 (210)
197 1pjz_A Thiopurine S-methyltran 98.9 4E-09 1.4E-13 95.5 10.9 61 115-177 22-92 (203)
198 2ar0_A M.ecoki, type I restric 98.9 4.2E-09 1.4E-13 110.0 12.5 61 115-176 169-251 (541)
199 3i53_A O-methyltransferase; CO 98.9 2E-08 6.9E-13 97.2 16.4 59 116-176 170-228 (332)
200 3s1s_A Restriction endonucleas 98.9 9.4E-10 3.2E-14 118.8 7.6 49 115-163 321-374 (878)
201 3khk_A Type I restriction-modi 98.9 1E-09 3.5E-14 114.8 7.6 152 117-330 246-426 (544)
202 1zx0_A Guanidinoacetate N-meth 98.9 7.4E-09 2.5E-13 95.2 12.5 57 116-176 61-117 (236)
203 2yqz_A Hypothetical protein TT 98.9 1.8E-08 6.1E-13 92.9 15.1 57 115-176 39-95 (263)
204 3ege_A Putative methyltransfer 98.9 5.5E-09 1.9E-13 97.7 11.6 65 93-176 21-85 (261)
205 3fut_A Dimethyladenosine trans 98.9 2.3E-09 7.9E-14 102.7 9.0 67 94-177 35-101 (271)
206 4hc4_A Protein arginine N-meth 98.9 3.1E-09 1.1E-13 106.3 10.3 59 116-177 84-142 (376)
207 1uir_A Polyamine aminopropyltr 98.9 1.5E-08 5.3E-13 98.3 14.3 138 115-327 77-222 (314)
208 2i7c_A Spermidine synthase; tr 98.9 2.1E-08 7.1E-13 96.0 15.0 97 72-176 43-141 (283)
209 3orh_A Guanidinoacetate N-meth 98.9 6.5E-09 2.2E-13 96.5 11.0 69 93-175 48-116 (236)
210 2ip2_A Probable phenazine-spec 98.9 9.7E-09 3.3E-13 99.3 12.7 58 117-176 169-226 (334)
211 3fpf_A Mtnas, putative unchara 98.9 4.3E-09 1.5E-13 102.2 10.0 86 82-176 96-181 (298)
212 1m6y_A S-adenosyl-methyltransf 98.9 2.7E-09 9.2E-14 103.7 8.5 58 116-176 27-84 (301)
213 2i62_A Nicotinamide N-methyltr 98.9 1.2E-08 4.2E-13 94.1 12.6 47 115-162 56-102 (265)
214 3dp7_A SAM-dependent methyltra 98.9 1.7E-08 5.9E-13 99.4 14.3 61 115-177 179-239 (363)
215 3p2e_A 16S rRNA methylase; met 98.9 6.7E-09 2.3E-13 96.1 10.5 59 116-176 25-87 (225)
216 1dl5_A Protein-L-isoaspartate 98.9 1.7E-08 5.8E-13 97.7 13.4 60 115-176 75-135 (317)
217 3i9f_A Putative type 11 methyl 98.9 3E-08 1E-12 85.8 13.6 52 115-175 17-68 (170)
218 2a14_A Indolethylamine N-methy 98.9 9E-09 3.1E-13 96.7 11.0 46 115-162 55-101 (263)
219 2p8j_A S-adenosylmethionine-de 98.9 2E-08 6.9E-13 89.6 12.8 57 116-176 24-80 (209)
220 2g72_A Phenylethanolamine N-me 98.9 2.3E-08 7.9E-13 94.6 13.8 46 115-161 71-116 (289)
221 1i1n_A Protein-L-isoaspartate 98.9 9.9E-09 3.4E-13 93.3 10.8 61 115-176 77-142 (226)
222 3lkd_A Type I restriction-modi 98.9 5.6E-09 1.9E-13 109.1 10.2 62 115-177 221-286 (542)
223 2bm8_A Cephalosporin hydroxyla 98.9 4.2E-09 1.4E-13 98.1 8.2 78 81-177 59-140 (236)
224 3uzu_A Ribosomal RNA small sub 98.9 6.4E-09 2.2E-13 99.9 9.7 69 94-177 30-100 (279)
225 1jg1_A PIMT;, protein-L-isoasp 98.9 3.6E-08 1.2E-12 90.7 14.3 84 76-175 65-148 (235)
226 4azs_A Methyltransferase WBDD; 98.8 4.8E-09 1.7E-13 109.8 9.3 119 16-176 5-123 (569)
227 2yxe_A Protein-L-isoaspartate 98.8 2.6E-08 8.8E-13 89.7 12.7 60 115-176 77-137 (215)
228 2b9e_A NOL1/NOP2/SUN domain fa 98.8 1.8E-08 6.3E-13 98.0 12.5 145 116-321 103-254 (309)
229 1u2z_A Histone-lysine N-methyl 98.8 3.4E-08 1.2E-12 100.6 14.5 60 115-175 242-309 (433)
230 2gb4_A Thiopurine S-methyltran 98.8 1.2E-07 4E-12 89.4 16.9 60 116-177 69-143 (252)
231 3ftd_A Dimethyladenosine trans 98.8 7.8E-09 2.7E-13 97.5 8.6 69 93-177 18-86 (249)
232 1yub_A Ermam, rRNA methyltrans 98.8 4E-10 1.4E-14 105.1 -0.6 57 115-177 29-85 (245)
233 2nyu_A Putative ribosomal RNA 98.8 3E-08 1E-12 87.7 11.6 154 116-346 23-189 (196)
234 3cc8_A Putative methyltransfer 98.8 7E-08 2.4E-12 86.6 14.1 42 115-158 32-73 (230)
235 3id6_C Fibrillarin-like rRNA/T 98.8 2.4E-07 8.3E-12 86.7 17.3 131 115-330 76-216 (232)
236 1qyr_A KSGA, high level kasuga 98.8 3.4E-09 1.2E-13 100.3 4.2 70 93-177 8-77 (252)
237 1vbf_A 231AA long hypothetical 98.8 5.9E-08 2E-12 88.3 12.3 82 76-176 44-125 (231)
238 1vlm_A SAM-dependent methyltra 98.8 1.2E-07 4E-12 86.1 14.0 46 116-176 48-93 (219)
239 3mq2_A 16S rRNA methyltransfer 98.7 5.4E-08 1.9E-12 87.9 11.4 61 115-177 27-91 (218)
240 3bxo_A N,N-dimethyltransferase 98.7 2E-07 6.9E-12 84.6 15.2 52 116-176 41-92 (239)
241 2xyq_A Putative 2'-O-methyl tr 98.7 7.4E-08 2.5E-12 93.2 11.5 144 115-347 63-214 (290)
242 3lcv_B Sisomicin-gentamicin re 98.7 3.5E-08 1.2E-12 94.4 9.0 101 53-176 90-190 (281)
243 4e2x_A TCAB9; kijanose, tetron 98.7 6.2E-08 2.1E-12 96.6 11.2 42 115-158 107-148 (416)
244 4hg2_A Methyltransferase type 98.7 7.9E-08 2.7E-12 91.0 10.9 68 86-176 23-90 (257)
245 3iv6_A Putative Zn-dependent a 98.7 1.8E-07 6.1E-12 89.1 13.3 46 115-162 45-90 (261)
246 2aot_A HMT, histamine N-methyl 98.7 5.2E-07 1.8E-11 85.6 15.9 57 115-172 52-114 (292)
247 1r18_A Protein-L-isoaspartate( 98.6 1.5E-07 5E-12 86.0 11.1 60 116-176 85-154 (227)
248 3ggd_A SAM-dependent methyltra 98.6 8.9E-08 3.1E-12 87.9 9.7 56 115-177 56-111 (245)
249 3bgv_A MRNA CAP guanine-N7 met 98.6 4.1E-07 1.4E-11 87.1 14.4 62 115-177 34-100 (313)
250 1af7_A Chemotaxis receptor met 98.6 1.1E-07 3.8E-12 91.1 10.3 44 116-159 106-157 (274)
251 1p91_A Ribosomal RNA large sub 98.6 9.7E-08 3.3E-12 89.0 9.7 54 116-176 86-139 (269)
252 2oyr_A UPF0341 protein YHIQ; a 98.6 1.9E-08 6.4E-13 95.8 4.6 58 117-176 90-154 (258)
253 3htx_A HEN1; HEN1, small RNA m 98.6 3E-07 1E-11 99.8 14.1 78 89-177 704-788 (950)
254 2qe6_A Uncharacterized protein 98.6 1.1E-06 3.7E-11 83.6 15.0 58 116-177 78-138 (274)
255 2gs9_A Hypothetical protein TT 98.6 2.9E-07 1E-11 82.3 10.4 50 115-176 36-86 (211)
256 3lst_A CALO1 methyltransferase 98.5 4.6E-07 1.6E-11 88.4 12.0 58 115-176 184-241 (348)
257 2avn_A Ubiquinone/menaquinone 98.5 7.1E-07 2.4E-11 83.0 11.0 43 116-160 55-97 (260)
258 2vdw_A Vaccinia virus capping 98.5 1.1E-06 3.9E-11 84.8 12.2 59 116-176 49-112 (302)
259 3ufb_A Type I restriction-modi 98.4 8.5E-07 2.9E-11 92.3 11.7 72 94-176 205-289 (530)
260 2zfu_A Nucleomethylin, cerebra 98.4 1.7E-06 5.9E-11 77.6 12.3 106 116-326 68-175 (215)
261 3reo_A (ISO)eugenol O-methyltr 98.4 2.4E-06 8.1E-11 84.4 13.9 53 115-176 203-255 (368)
262 1fp1_D Isoliquiritigenin 2'-O- 98.4 2.6E-06 9E-11 83.8 14.2 53 115-176 209-261 (372)
263 3frh_A 16S rRNA methylase; met 98.4 9.5E-07 3.3E-11 83.5 9.8 57 115-177 105-161 (253)
264 1fp2_A Isoflavone O-methyltran 98.4 2.8E-06 9.5E-11 82.9 13.4 52 116-176 189-240 (352)
265 4a6d_A Hydroxyindole O-methylt 98.3 1.5E-05 5.1E-10 78.2 16.9 59 116-177 180-238 (353)
266 2cmg_A Spermidine synthase; tr 98.3 1.2E-06 4E-11 83.1 8.6 59 115-175 72-132 (262)
267 1zg3_A Isoflavanone 4'-O-methy 98.3 7.9E-06 2.7E-10 79.8 13.2 52 116-176 194-245 (358)
268 3opn_A Putative hemolysin; str 98.2 2.8E-07 9.7E-12 85.8 2.3 44 115-159 37-80 (232)
269 3p9c_A Caffeic acid O-methyltr 98.2 9.2E-06 3.1E-10 80.1 13.0 53 115-176 201-253 (364)
270 2wa2_A Non-structural protein 98.2 1.5E-06 5.1E-11 83.1 5.8 31 116-149 83-113 (276)
271 3hp7_A Hemolysin, putative; st 98.1 6.7E-06 2.3E-10 79.5 9.5 42 115-157 85-126 (291)
272 2oxt_A Nucleoside-2'-O-methylt 98.1 1.3E-06 4.5E-11 83.0 3.4 31 116-149 75-105 (265)
273 4gqb_A Protein arginine N-meth 98.1 1.1E-05 3.6E-10 85.7 10.0 61 115-177 357-421 (637)
274 3sso_A Methyltransferase; macr 98.0 9.7E-06 3.3E-10 81.8 7.8 52 115-177 216-274 (419)
275 2k4m_A TR8_protein, UPF0146 pr 97.8 1.6E-05 5.5E-10 69.6 5.1 37 116-153 36-73 (153)
276 3cvo_A Methyltransferase-like 97.8 0.0002 6.9E-09 65.6 12.0 58 116-177 31-90 (202)
277 3giw_A Protein of unknown func 97.7 6.8E-05 2.3E-09 72.0 8.6 60 117-178 80-142 (277)
278 2p41_A Type II methyltransfera 97.7 2.3E-05 8E-10 75.8 3.9 29 116-147 83-111 (305)
279 3ua3_A Protein arginine N-meth 97.6 5.4E-05 1.8E-09 81.0 6.0 60 116-177 410-482 (745)
280 1wg8_A Predicted S-adenosylmet 97.6 0.00011 3.8E-09 70.7 7.3 53 116-176 23-75 (285)
281 2zig_A TTHA0409, putative modi 97.6 0.0002 6.9E-09 68.5 9.2 59 92-162 222-280 (297)
282 2ld4_A Anamorsin; methyltransf 97.5 0.00032 1.1E-08 60.8 8.9 113 115-329 12-133 (176)
283 4fzv_A Putative methyltransfer 97.4 0.00055 1.9E-08 67.9 10.4 146 115-320 148-303 (359)
284 2oo3_A Protein involved in cat 97.3 0.00022 7.4E-09 68.6 5.3 143 92-332 81-227 (283)
285 3o4f_A Spermidine synthase; am 97.1 0.0086 2.9E-07 57.8 14.8 63 115-177 83-148 (294)
286 1g60_A Adenine-specific methyl 97.1 0.0011 3.7E-08 62.2 7.9 60 92-163 199-258 (260)
287 2qy6_A UPF0209 protein YFCK; s 97.1 0.0038 1.3E-07 58.9 11.4 47 115-161 60-132 (257)
288 2wk1_A NOVP; transferase, O-me 96.7 0.0019 6.6E-08 61.9 6.4 79 90-177 89-199 (282)
289 1i4w_A Mitochondrial replicati 96.7 0.0052 1.8E-07 60.8 9.2 58 116-178 59-116 (353)
290 2zig_A TTHA0409, putative modi 96.5 0.0036 1.2E-07 59.7 6.8 80 239-326 38-132 (297)
291 3c6k_A Spermine synthase; sper 96.2 0.018 6E-07 57.5 9.7 137 115-320 205-350 (381)
292 2c7p_A Modification methylase 95.3 0.022 7.5E-07 55.4 6.3 44 115-160 10-54 (327)
293 2py6_A Methyltransferase FKBM; 95.3 0.043 1.5E-06 54.9 8.3 62 115-176 226-291 (409)
294 3g7u_A Cytosine-specific methy 94.6 0.042 1.4E-06 54.5 6.2 52 117-177 3-55 (376)
295 3tka_A Ribosomal RNA small sub 94.0 0.08 2.7E-06 52.0 6.6 57 115-177 57-114 (347)
296 1boo_A Protein (N-4 cytosine-s 93.7 0.14 4.7E-06 49.4 7.7 75 239-325 31-115 (323)
297 4auk_A Ribosomal RNA large sub 93.4 0.14 4.9E-06 50.9 7.3 51 115-176 211-261 (375)
298 1boo_A Protein (N-4 cytosine-s 93.2 0.11 3.7E-06 50.1 5.9 47 115-163 252-298 (323)
299 1g55_A DNA cytosine methyltran 92.7 0.13 4.5E-06 50.0 5.9 45 116-160 2-47 (343)
300 1eg2_A Modification methylase 92.3 0.19 6.6E-06 48.6 6.3 60 92-163 229-291 (319)
301 3b5i_A S-adenosyl-L-methionine 91.0 0.86 2.9E-05 45.1 9.6 49 115-177 52-100 (374)
302 3qv2_A 5-cytosine DNA methyltr 90.8 0.28 9.6E-06 47.6 5.7 45 115-159 9-55 (327)
303 2qrv_A DNA (cytosine-5)-methyl 89.1 0.56 1.9E-05 44.9 6.2 46 114-159 14-60 (295)
304 2efj_A 3,7-dimethylxanthine me 88.7 1.4 4.7E-05 43.8 8.9 21 116-136 53-73 (384)
305 1g60_A Adenine-specific methyl 88.4 1 3.6E-05 41.6 7.4 72 239-323 21-92 (260)
306 4h0n_A DNMT2; SAH binding, tra 86.4 0.85 2.9E-05 44.3 5.7 44 116-159 3-47 (333)
307 3me5_A Cytosine-specific methy 84.9 1.3 4.4E-05 45.4 6.4 44 114-159 86-130 (482)
308 3r24_A NSP16, 2'-O-methyl tran 83.8 21 0.00072 34.6 13.8 65 280-347 193-260 (344)
309 3ubt_Y Modification methylase 82.4 1.2 4.1E-05 42.3 4.7 39 118-158 2-41 (331)
310 3ioy_A Short-chain dehydrogena 81.6 2.3 7.7E-05 40.3 6.3 61 116-178 8-70 (319)
311 1m6e_X S-adenosyl-L-methionnin 79.8 2.9 9.8E-05 41.1 6.5 19 115-133 51-69 (359)
312 3gcz_A Polyprotein; flavivirus 79.6 1.1 3.6E-05 42.9 3.2 34 116-149 91-124 (282)
313 3evf_A RNA-directed RNA polyme 79.5 1.1 3.9E-05 42.6 3.3 33 116-148 75-107 (277)
314 3t4x_A Oxidoreductase, short c 77.0 4.2 0.00014 37.1 6.4 60 116-177 10-71 (267)
315 3s2e_A Zinc-containing alcohol 76.7 7.6 0.00026 36.7 8.4 74 76-157 125-208 (340)
316 4g81_D Putative hexonate dehyd 76.4 2.4 8.1E-05 39.5 4.5 59 115-177 8-68 (255)
317 1eg2_A Modification methylase 75.1 16 0.00055 34.9 10.2 70 239-323 56-133 (319)
318 3rku_A Oxidoreductase YMR226C; 74.6 6.1 0.00021 36.7 6.9 61 116-178 33-98 (287)
319 1rjd_A PPM1P, carboxy methyl t 71.7 7.3 0.00025 37.6 6.9 62 116-178 98-178 (334)
320 4fn4_A Short chain dehydrogena 71.4 18 0.0006 33.5 9.2 60 115-178 6-67 (254)
321 3lkz_A Non-structural protein 70.1 2.1 7.3E-05 41.3 2.5 33 116-149 95-128 (321)
322 3p8z_A Mtase, non-structural p 69.6 2.8 9.4E-05 39.4 3.1 34 116-149 79-112 (267)
323 3eld_A Methyltransferase; flav 69.2 2.8 9.6E-05 40.3 3.2 35 115-149 81-115 (300)
324 4dkj_A Cytosine-specific methy 68.4 5.8 0.0002 39.5 5.5 46 115-160 9-59 (403)
325 3swr_A DNA (cytosine-5)-methyl 65.6 7.4 0.00025 43.3 6.0 43 114-158 538-582 (1002)
326 3vyw_A MNMC2; tRNA wobble urid 65.4 64 0.0022 30.9 11.9 57 271-341 201-257 (308)
327 3o38_A Short chain dehydrogena 65.0 25 0.00087 31.5 8.8 60 116-178 22-84 (266)
328 3iht_A S-adenosyl-L-methionine 64.6 12 0.0004 33.0 5.8 45 93-147 28-72 (174)
329 4fgs_A Probable dehydrogenase 64.1 8.8 0.0003 36.0 5.5 57 115-178 28-86 (273)
330 2dph_A Formaldehyde dismutase; 64.0 9.7 0.00033 37.0 6.0 40 116-156 186-227 (398)
331 3f9i_A 3-oxoacyl-[acyl-carrier 63.2 15 0.00052 32.6 6.8 56 115-177 13-70 (249)
332 3h7a_A Short chain dehydrogena 63.2 18 0.00062 32.6 7.4 59 116-178 7-67 (252)
333 3qiv_A Short-chain dehydrogena 63.0 32 0.0011 30.5 9.0 59 116-178 9-69 (253)
334 1e7w_A Pteridine reductase; di 62.9 37 0.0013 31.1 9.6 59 116-178 9-71 (291)
335 3ucx_A Short chain dehydrogena 62.8 36 0.0012 30.6 9.4 59 116-178 11-71 (264)
336 3tjr_A Short chain dehydrogena 62.5 33 0.0011 31.7 9.3 60 115-178 30-91 (301)
337 3svt_A Short-chain type dehydr 62.1 34 0.0012 31.0 9.2 62 116-178 11-74 (281)
338 3llv_A Exopolyphosphatase-rela 61.5 7.7 0.00026 31.5 4.1 50 117-177 7-58 (141)
339 1xg5_A ARPG836; short chain de 61.2 39 0.0013 30.5 9.4 61 116-178 32-94 (279)
340 1f8f_A Benzyl alcohol dehydrog 61.1 14 0.00049 35.3 6.6 41 116-157 191-233 (371)
341 1zkd_A DUF185; NESG, RPR58, st 60.7 17 0.00057 36.1 7.0 54 115-172 80-140 (387)
342 3jv7_A ADH-A; dehydrogenase, n 60.5 15 0.00052 34.6 6.6 42 116-157 172-214 (345)
343 3rkr_A Short chain oxidoreduct 59.9 32 0.0011 30.9 8.5 59 116-178 29-89 (262)
344 3o26_A Salutaridine reductase; 59.9 31 0.0011 31.2 8.5 60 116-178 12-73 (311)
345 3rd5_A Mypaa.01249.C; ssgcid, 59.9 18 0.00061 33.2 6.8 57 115-178 15-73 (291)
346 3ic5_A Putative saccharopine d 58.9 32 0.0011 26.1 7.3 38 117-156 6-46 (118)
347 2qhx_A Pteridine reductase 1; 58.7 46 0.0016 31.3 9.6 58 117-178 47-108 (328)
348 3tfo_A Putative 3-oxoacyl-(acy 58.6 34 0.0012 31.1 8.5 58 117-178 5-64 (264)
349 3gaf_A 7-alpha-hydroxysteroid 58.3 37 0.0013 30.5 8.5 60 115-178 11-72 (256)
350 1mxh_A Pteridine reductase 2; 58.0 21 0.00071 32.3 6.8 58 117-177 12-72 (276)
351 3nyw_A Putative oxidoreductase 57.8 36 0.0012 30.4 8.4 62 116-178 7-70 (250)
352 3lf2_A Short chain oxidoreduct 57.8 42 0.0014 30.2 8.9 60 116-178 8-70 (265)
353 3v8b_A Putative dehydrogenase, 57.6 40 0.0014 30.9 8.8 59 116-178 28-88 (283)
354 3imf_A Short chain dehydrogena 57.1 33 0.0011 30.8 8.0 59 116-178 6-66 (257)
355 3sju_A Keto reductase; short-c 56.9 42 0.0014 30.5 8.8 59 116-178 24-84 (279)
356 2nwq_A Probable short-chain de 56.0 13 0.00045 34.0 5.2 57 117-178 22-80 (272)
357 3two_A Mannitol dehydrogenase; 56.0 12 0.00042 35.4 5.1 41 116-157 177-218 (348)
358 3lyl_A 3-oxoacyl-(acyl-carrier 55.6 47 0.0016 29.2 8.7 59 116-178 5-65 (247)
359 2h6e_A ADH-4, D-arabinose 1-de 54.5 19 0.00066 33.9 6.2 42 116-157 171-214 (344)
360 1kol_A Formaldehyde dehydrogen 54.3 22 0.00075 34.3 6.7 41 116-157 186-228 (398)
361 1wma_A Carbonyl reductase [NAD 54.1 50 0.0017 29.1 8.7 59 116-178 4-65 (276)
362 1yb1_A 17-beta-hydroxysteroid 53.7 60 0.0021 29.2 9.3 59 116-178 31-91 (272)
363 3t7c_A Carveol dehydrogenase; 53.7 58 0.002 29.9 9.3 60 115-178 27-100 (299)
364 3awd_A GOX2181, putative polyo 53.6 63 0.0022 28.4 9.3 59 116-178 13-73 (260)
365 1iy8_A Levodione reductase; ox 53.5 54 0.0019 29.3 8.9 61 116-178 13-75 (267)
366 2jah_A Clavulanic acid dehydro 53.5 64 0.0022 28.6 9.3 59 116-178 7-67 (247)
367 3pxx_A Carveol dehydrogenase; 53.3 82 0.0028 28.2 10.1 60 115-178 9-82 (287)
368 2rhc_B Actinorhodin polyketide 53.0 61 0.0021 29.3 9.2 59 116-178 22-82 (277)
369 1pl8_A Human sorbitol dehydrog 53.0 24 0.00083 33.5 6.7 41 116-157 172-214 (356)
370 1oaa_A Sepiapterin reductase; 52.9 36 0.0012 30.4 7.5 61 116-178 6-71 (259)
371 3av4_A DNA (cytosine-5)-methyl 51.9 18 0.00061 41.5 6.2 43 115-159 850-894 (1330)
372 3uve_A Carveol dehydrogenase ( 51.8 62 0.0021 29.3 9.0 60 115-178 10-87 (286)
373 4ft4_B DNA (cytosine-5)-methyl 51.7 13 0.00043 39.8 4.8 45 115-159 211-260 (784)
374 3pk0_A Short-chain dehydrogena 50.8 54 0.0018 29.4 8.4 61 115-178 9-71 (262)
375 3sx2_A Putative 3-ketoacyl-(ac 50.6 59 0.002 29.2 8.7 60 115-178 12-85 (278)
376 1zem_A Xylitol dehydrogenase; 50.5 69 0.0024 28.6 9.1 59 116-178 7-67 (262)
377 1jvb_A NAD(H)-dependent alcoho 50.4 28 0.00095 32.8 6.6 43 115-157 170-214 (347)
378 3pgx_A Carveol dehydrogenase; 50.4 67 0.0023 29.0 9.0 60 115-178 14-88 (280)
379 1xkq_A Short-chain reductase f 49.9 53 0.0018 29.7 8.2 62 116-178 6-69 (280)
380 2ae2_A Protein (tropinone redu 49.7 73 0.0025 28.3 9.1 59 116-178 9-69 (260)
381 1e3j_A NADP(H)-dependent ketos 49.6 29 0.001 32.8 6.6 41 116-157 169-210 (352)
382 4f3n_A Uncharacterized ACR, CO 49.5 16 0.00056 36.7 4.9 83 80-172 107-200 (432)
383 4egf_A L-xylulose reductase; s 49.2 41 0.0014 30.3 7.3 60 116-178 20-81 (266)
384 1ae1_A Tropinone reductase-I; 48.9 80 0.0027 28.4 9.3 59 116-178 21-81 (273)
385 3ppi_A 3-hydroxyacyl-COA dehyd 48.8 61 0.0021 29.2 8.4 56 116-178 30-87 (281)
386 1uuf_A YAHK, zinc-type alcohol 48.5 20 0.0007 34.4 5.4 41 116-157 195-236 (369)
387 3l77_A Short-chain alcohol deh 48.0 63 0.0021 28.1 8.2 59 117-178 3-63 (235)
388 3tsc_A Putative oxidoreductase 47.9 84 0.0029 28.3 9.3 60 115-178 10-84 (277)
389 1wey_A Calcipressin 1; structu 47.9 8.9 0.0003 31.1 2.2 62 28-90 26-97 (104)
390 3r1i_A Short-chain type dehydr 47.7 44 0.0015 30.4 7.3 59 116-178 32-92 (276)
391 2qq5_A DHRS1, dehydrogenase/re 47.5 55 0.0019 29.2 7.8 58 117-178 6-65 (260)
392 3ftp_A 3-oxoacyl-[acyl-carrier 46.9 52 0.0018 29.8 7.7 59 116-178 28-88 (270)
393 4eez_A Alcohol dehydrogenase 1 46.9 36 0.0012 31.9 6.7 42 116-157 164-206 (348)
394 4da9_A Short-chain dehydrogena 46.8 88 0.003 28.4 9.2 60 115-178 28-90 (280)
395 4imr_A 3-oxoacyl-(acyl-carrier 46.7 34 0.0012 31.2 6.4 59 116-178 33-93 (275)
396 4hp8_A 2-deoxy-D-gluconate 3-d 46.5 74 0.0025 29.2 8.6 58 115-178 8-67 (247)
397 3cxt_A Dehydrogenase with diff 46.2 81 0.0028 28.9 9.0 59 116-178 34-94 (291)
398 4fc7_A Peroxisomal 2,4-dienoyl 46.2 63 0.0022 29.2 8.1 61 115-178 26-88 (277)
399 1fmc_A 7 alpha-hydroxysteroid 46.0 60 0.0021 28.4 7.8 59 116-178 11-71 (255)
400 3tox_A Short chain dehydrogena 45.8 34 0.0012 31.3 6.3 59 116-178 8-68 (280)
401 2gdz_A NAD+-dependent 15-hydro 45.6 75 0.0026 28.3 8.5 60 117-178 8-69 (267)
402 1lss_A TRK system potassium up 45.5 27 0.00093 27.5 4.9 38 117-156 5-44 (140)
403 1xhl_A Short-chain dehydrogena 45.5 71 0.0024 29.4 8.5 62 116-178 26-89 (297)
404 3asu_A Short-chain dehydrogena 45.4 29 0.00098 31.1 5.5 53 119-178 3-57 (248)
405 1xu9_A Corticosteroid 11-beta- 44.5 68 0.0023 29.0 8.0 60 116-178 28-89 (286)
406 1geg_A Acetoin reductase; SDR 44.2 1E+02 0.0035 27.3 9.1 57 118-178 4-62 (256)
407 3s55_A Putative short-chain de 44.1 1E+02 0.0035 27.7 9.2 60 115-178 9-82 (281)
408 1spx_A Short-chain reductase f 43.6 83 0.0028 28.2 8.5 61 117-178 7-69 (278)
409 3oec_A Carveol dehydrogenase ( 43.4 84 0.0029 29.2 8.7 59 116-178 46-118 (317)
410 4ibo_A Gluconate dehydrogenase 43.4 45 0.0015 30.3 6.6 59 116-178 26-86 (271)
411 2zat_A Dehydrogenase/reductase 43.3 94 0.0032 27.5 8.7 59 116-178 14-74 (260)
412 3ai3_A NADPH-sorbose reductase 43.0 94 0.0032 27.6 8.7 59 116-178 7-68 (263)
413 4iin_A 3-ketoacyl-acyl carrier 42.4 91 0.0031 27.9 8.5 59 116-178 29-90 (271)
414 1y1p_A ARII, aldehyde reductas 42.3 74 0.0025 28.9 8.0 59 116-177 11-72 (342)
415 4dvj_A Putative zinc-dependent 42.2 32 0.0011 32.8 5.6 42 116-157 172-215 (363)
416 4dry_A 3-oxoacyl-[acyl-carrier 41.9 58 0.002 29.7 7.1 60 116-178 33-94 (281)
417 4eue_A Putative reductase CA_C 41.8 31 0.0011 34.3 5.5 60 115-178 59-134 (418)
418 4eso_A Putative oxidoreductase 41.3 94 0.0032 27.7 8.4 56 116-178 8-65 (255)
419 2dpo_A L-gulonate 3-dehydrogen 40.5 24 0.00083 33.6 4.4 42 117-160 7-50 (319)
420 2uvd_A 3-oxoacyl-(acyl-carrier 40.2 1.1E+02 0.0037 26.9 8.5 58 117-178 5-65 (246)
421 2uyo_A Hypothetical protein ML 40.2 1.1E+02 0.0039 28.7 9.1 58 117-177 104-163 (310)
422 1yxm_A Pecra, peroxisomal tran 39.7 1.3E+02 0.0045 27.1 9.3 62 116-178 18-83 (303)
423 3i1j_A Oxidoreductase, short c 39.6 1E+02 0.0035 26.8 8.3 59 115-176 13-73 (247)
424 3rih_A Short chain dehydrogena 38.9 54 0.0018 30.3 6.5 60 116-178 41-102 (293)
425 3ek2_A Enoyl-(acyl-carrier-pro 38.9 64 0.0022 28.6 6.8 60 115-178 13-75 (271)
426 1vl8_A Gluconate 5-dehydrogena 38.8 1.2E+02 0.004 27.3 8.7 60 115-178 20-82 (267)
427 3gvc_A Oxidoreductase, probabl 38.8 90 0.0031 28.4 8.0 56 116-178 29-86 (277)
428 1w6u_A 2,4-dienoyl-COA reducta 38.8 1.1E+02 0.0039 27.5 8.7 60 116-178 26-87 (302)
429 4dmm_A 3-oxoacyl-[acyl-carrier 38.6 1.1E+02 0.0038 27.5 8.5 59 116-178 28-89 (269)
430 3d3w_A L-xylulose reductase; u 38.5 72 0.0025 27.8 7.0 54 116-177 7-62 (244)
431 3v2h_A D-beta-hydroxybutyrate 38.4 1.1E+02 0.0037 27.8 8.4 60 116-178 25-87 (281)
432 2z1n_A Dehydrogenase; reductas 37.9 1.4E+02 0.0046 26.5 8.9 61 116-178 7-69 (260)
433 2b4q_A Rhamnolipids biosynthes 37.8 75 0.0026 28.8 7.2 57 116-177 29-87 (276)
434 3f1l_A Uncharacterized oxidore 37.8 88 0.003 27.7 7.6 59 115-176 11-71 (252)
435 3l6e_A Oxidoreductase, short-c 37.8 1.1E+02 0.0039 26.8 8.3 55 117-178 4-60 (235)
436 3edm_A Short chain dehydrogena 37.8 95 0.0032 27.7 7.8 59 116-178 8-69 (259)
437 1xq1_A Putative tropinone redu 37.8 1.2E+02 0.0041 26.8 8.5 58 116-177 14-73 (266)
438 1cyd_A Carbonyl reductase; sho 37.7 79 0.0027 27.4 7.1 54 116-177 7-62 (244)
439 3mi6_A Alpha-galactosidase; NE 37.4 58 0.002 35.0 7.1 91 50-148 446-551 (745)
440 3n74_A 3-ketoacyl-(acyl-carrie 37.2 1.4E+02 0.0047 26.3 8.8 56 116-178 9-66 (261)
441 2c07_A 3-oxoacyl-(acyl-carrier 37.0 1.4E+02 0.0048 26.9 8.9 59 116-178 44-104 (285)
442 3e8x_A Putative NAD-dependent 36.9 1E+02 0.0034 26.7 7.7 52 115-176 20-74 (236)
443 3fpc_A NADP-dependent alcohol 36.6 41 0.0014 31.7 5.3 41 116-157 167-209 (352)
444 3rwb_A TPLDH, pyridoxal 4-dehy 36.5 92 0.0032 27.6 7.5 56 116-178 6-63 (247)
445 4e6p_A Probable sorbitol dehyd 36.2 1.5E+02 0.005 26.3 8.8 56 116-178 8-65 (259)
446 1cdo_A Alcohol dehydrogenase; 36.2 40 0.0014 32.1 5.2 41 116-157 193-235 (374)
447 1p0f_A NADP-dependent alcohol 36.0 39 0.0013 32.2 5.1 41 116-157 192-234 (373)
448 2cfc_A 2-(R)-hydroxypropyl-COM 36.0 1.3E+02 0.0044 26.1 8.3 58 118-178 4-63 (250)
449 4ej6_A Putative zinc-binding d 35.6 62 0.0021 30.9 6.5 41 116-157 183-225 (370)
450 3a28_C L-2.3-butanediol dehydr 35.5 1.1E+02 0.0037 27.1 7.8 58 117-178 3-64 (258)
451 4fs3_A Enoyl-[acyl-carrier-pro 35.5 1E+02 0.0035 27.7 7.6 62 115-178 5-69 (256)
452 3iup_A Putative NADPH:quinone 35.4 41 0.0014 32.3 5.2 41 117-157 172-214 (379)
453 3vtf_A UDP-glucose 6-dehydroge 35.3 27 0.00093 35.1 3.9 37 117-155 22-60 (444)
454 1pqw_A Polyketide synthase; ro 35.1 47 0.0016 28.2 5.0 40 116-156 39-80 (198)
455 1ja9_A 4HNR, 1,3,6,8-tetrahydr 34.8 1.1E+02 0.0038 26.9 7.7 59 116-178 21-82 (274)
456 4b79_A PA4098, probable short- 34.8 30 0.001 31.7 3.9 53 115-177 10-64 (242)
457 3oid_A Enoyl-[acyl-carrier-pro 34.2 1.4E+02 0.0046 26.7 8.3 58 117-178 5-65 (258)
458 3ado_A Lambda-crystallin; L-gu 34.1 52 0.0018 31.5 5.6 43 117-161 7-51 (319)
459 2bgk_A Rhizome secoisolaricire 33.9 1.4E+02 0.0047 26.4 8.2 58 116-178 16-75 (278)
460 2jhf_A Alcohol dehydrogenase E 33.9 46 0.0016 31.7 5.2 41 116-157 192-234 (374)
461 3fwz_A Inner membrane protein 33.7 91 0.0031 25.1 6.4 51 116-177 7-59 (140)
462 2fzw_A Alcohol dehydrogenase c 33.6 45 0.0016 31.6 5.1 41 116-157 191-233 (373)
463 1h2b_A Alcohol dehydrogenase; 33.4 38 0.0013 32.1 4.5 41 116-156 187-228 (359)
464 3uf0_A Short-chain dehydrogena 33.3 1.2E+02 0.0042 27.3 7.9 59 115-178 30-90 (273)
465 3ijr_A Oxidoreductase, short c 33.3 1.5E+02 0.0051 27.0 8.5 60 115-178 46-108 (291)
466 4dqx_A Probable oxidoreductase 33.1 1.7E+02 0.0058 26.4 8.8 57 115-178 26-84 (277)
467 3oig_A Enoyl-[acyl-carrier-pro 32.9 1.2E+02 0.0041 26.8 7.7 60 116-178 7-70 (266)
468 1gee_A Glucose 1-dehydrogenase 32.9 1.2E+02 0.004 26.7 7.5 58 117-178 8-68 (261)
469 3zv4_A CIS-2,3-dihydrobiphenyl 32.5 1.7E+02 0.0057 26.4 8.7 56 116-178 5-62 (281)
470 2eih_A Alcohol dehydrogenase; 32.4 73 0.0025 29.8 6.3 41 116-157 167-209 (343)
471 1zk4_A R-specific alcohol dehy 32.2 94 0.0032 27.1 6.7 58 116-178 6-65 (251)
472 2pnf_A 3-oxoacyl-[acyl-carrier 31.2 97 0.0033 26.9 6.6 59 116-178 7-68 (248)
473 3is3_A 17BETA-hydroxysteroid d 31.2 1.8E+02 0.0062 25.9 8.6 60 115-178 17-79 (270)
474 3op4_A 3-oxoacyl-[acyl-carrier 31.1 1.5E+02 0.0052 26.1 8.0 56 116-178 9-66 (248)
475 3m6i_A L-arabinitol 4-dehydrog 30.8 66 0.0022 30.4 5.7 41 117-158 181-223 (363)
476 1qsg_A Enoyl-[acyl-carrier-pro 30.4 53 0.0018 29.4 4.8 57 117-177 10-69 (265)
477 3grk_A Enoyl-(acyl-carrier-pro 30.2 1.7E+02 0.0058 26.6 8.4 59 116-178 31-92 (293)
478 3ksu_A 3-oxoacyl-acyl carrier 30.1 1.1E+02 0.0037 27.4 6.8 60 115-178 10-74 (262)
479 3qlj_A Short chain dehydrogena 30.1 83 0.0028 29.2 6.2 59 116-178 27-97 (322)
480 4e3z_A Putative oxidoreductase 30.1 1.6E+02 0.0055 26.2 8.0 59 116-178 26-87 (272)
481 3osu_A 3-oxoacyl-[acyl-carrier 30.1 2E+02 0.0067 25.2 8.6 58 117-178 5-65 (246)
482 2bd0_A Sepiapterin reductase; 30.1 1.6E+02 0.0056 25.4 7.9 57 118-178 4-69 (244)
483 2hcy_A Alcohol dehydrogenase 1 29.9 61 0.0021 30.4 5.3 42 115-157 169-212 (347)
484 2x9g_A PTR1, pteridine reducta 29.9 1.3E+02 0.0046 27.1 7.5 58 116-177 23-84 (288)
485 3sc4_A Short chain dehydrogena 29.7 87 0.003 28.5 6.2 59 116-178 9-76 (285)
486 3ip1_A Alcohol dehydrogenase, 29.6 87 0.003 30.2 6.5 41 116-157 214-256 (404)
487 3r3s_A Oxidoreductase; structu 29.1 1.5E+02 0.0053 26.9 7.9 60 115-178 48-111 (294)
488 3afn_B Carbonyl reductase; alp 29.0 81 0.0028 27.5 5.7 58 117-178 8-68 (258)
489 4gkb_A 3-oxoacyl-[acyl-carrier 29.0 1E+02 0.0035 28.2 6.5 59 115-178 6-66 (258)
490 4dyv_A Short-chain dehydrogena 28.8 1.4E+02 0.0047 27.0 7.4 56 116-178 28-85 (272)
491 3uko_A Alcohol dehydrogenase c 28.6 44 0.0015 31.9 4.1 40 116-156 194-235 (378)
492 2wsb_A Galactitol dehydrogenas 28.3 2.1E+02 0.0073 24.7 8.4 56 116-178 11-69 (254)
493 3gk3_A Acetoacetyl-COA reducta 28.1 1.8E+02 0.0063 25.8 8.1 59 116-178 25-86 (269)
494 3l4b_C TRKA K+ channel protien 28.1 53 0.0018 28.6 4.2 46 124-177 6-53 (218)
495 1hxh_A 3BETA/17BETA-hydroxyste 27.8 1.5E+02 0.0051 26.1 7.3 56 116-178 6-63 (253)
496 3grp_A 3-oxoacyl-(acyl carrier 27.6 2E+02 0.0069 25.7 8.3 57 115-178 26-84 (266)
497 3uog_A Alcohol dehydrogenase; 27.6 1.1E+02 0.0037 28.9 6.7 41 116-157 190-231 (363)
498 3gms_A Putative NADPH:quinone 27.5 50 0.0017 30.9 4.2 42 115-157 144-187 (340)
499 3pvc_A TRNA 5-methylaminomethy 27.3 45 0.0015 34.8 4.1 40 115-154 58-112 (689)
500 3guy_A Short-chain dehydrogena 26.8 93 0.0032 27.0 5.6 54 118-178 3-58 (230)
No 1
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=100.00 E-value=1.5e-37 Score=291.37 Aligned_cols=242 Identities=45% Similarity=0.807 Sum_probs=193.9
Q ss_pred CCCccccCCCHHHHHHHHHHHhhccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCccc
Q 016734 48 DGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127 (384)
Q Consensus 48 ~g~~~idf~~~~av~~Lt~alL~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG 127 (384)
+|+.+|||+++++++.|+++++++|||++|.+++++|+|++|+|..+..++.+++..... ......+|||+|||+|
T Consensus 2 ~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~----~~~~~~~vLDlG~G~G 77 (254)
T 2h00_A 2 SGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDS----DKSTLRRGIDIGTGAS 77 (254)
T ss_dssp ---CCSCTTSHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCG----GGCCCCEEEEESCTTT
T ss_pred CcceEeecCChHHHHHHHHHHHHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhccc----cCCCCCEEEEeCCChh
Confidence 478899999999999999999999999999999999999988898999888888753210 0013568999999999
Q ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcC
Q 016734 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207 (384)
Q Consensus 128 ~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (384)
+++..++.+.++++|+|+|+|+.+++.|++|++.++ +.++++++++|..+
T Consensus 78 ~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~----------------------------- 127 (254)
T 2h00_A 78 CIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKT----------------------------- 127 (254)
T ss_dssp THHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTC-----------------------------
T ss_pred HHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhh-----------------------------
Confidence 999999988888999999999999999999999997 88889999987431
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCcccccccC-CCcEEEEEECCCcccchhh-h--------ccCCccccCCCcccccccC
Q 016734 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GEQFDFCICNPPFFESMEE-A--------GLNPKTSCGGTPEEMVCSG 277 (384)
Q Consensus 208 ~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~-~~~fD~i~cNPPy~~s~~~-~--------~~~p~~~~~g~~~E~~~~G 277 (384)
.++..+... +++||+|+|||||+....+ . ..+|..++.+...+++.+|
T Consensus 128 ----------------------~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkpg 185 (254)
T 2h00_A 128 ----------------------LLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEG 185 (254)
T ss_dssp ----------------------SSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHH
T ss_pred ----------------------hhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecC
Confidence 001111101 2589999999999976521 1 1235555556677889999
Q ss_pred chHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEEEecC
Q 016734 278 GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345 (384)
Q Consensus 278 Gel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~AWsf~ 345 (384)
|.+.|+..+++++..++.+.+|+.+++|....++.+.+.|++.|++.+++.++.+|++.||++||+|.
T Consensus 186 G~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g~~~~~~~~w~~~ 253 (254)
T 2h00_A 186 GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFY 253 (254)
T ss_dssp THHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEEESC
T ss_pred CEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEecCCceEEEEEeecc
Confidence 99999999999998888999999999998888899999999999999999999999999999999996
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.95 E-value=9e-27 Score=214.05 Aligned_cols=215 Identities=17% Similarity=0.249 Sum_probs=159.3
Q ss_pred ccccCCCHHHHHHHHHHHhhccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCc-ccHH
Q 016734 51 PRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG-ANCI 129 (384)
Q Consensus 51 ~~idf~~~~av~~Lt~alL~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtG-sG~I 129 (384)
.++||+++++++.++++++++|||..+.+.+++++|+ |+++..+ +...+ ....+|||+||| +|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~l~--~~~~~-----------~~~~~vLDlG~G~~G~~ 70 (230)
T 3evz_A 5 GKLDFSNRQARILYNKAIAKALFGLDIEYHPKGLVTT-PISRYIF--LKTFL-----------RGGEVALEIGTGHTAMM 70 (230)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHCCCCCCCTTSCCCC-HHHHHHH--HHTTC-----------CSSCEEEEECCTTTCHH
T ss_pred ceeeecCHHHHHHHHHHHHHHhcCCceecCCCeEeCC-CchhhhH--hHhhc-----------CCCCEEEEcCCCHHHHH
Confidence 4689999999999999999999999999999999999 7664321 22111 134689999999 9999
Q ss_pred HHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCC
Q 016734 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAE 209 (384)
Q Consensus 130 ~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (384)
+..++... +.+|+|+|+|+.+++.|++|++.++ + +++++.+|...
T Consensus 71 ~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~------------------------------- 115 (230)
T 3evz_A 71 ALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGI------------------------------- 115 (230)
T ss_dssp HHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCS-------------------------------
T ss_pred HHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchh-------------------------------
Confidence 99888776 7899999999999999999999997 5 68999887421
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHH
Q 016734 210 PSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289 (384)
Q Consensus 210 ~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~e 289 (384)
+..+ .+++||+|+|||||+...+....+|..++.+... ++.++..++++
T Consensus 116 ----------------------~~~~--~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~ 164 (230)
T 3evz_A 116 ----------------------IKGV--VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKY-------GEEFSVKLLEE 164 (230)
T ss_dssp ----------------------STTT--CCSCEEEEEECCCCC---------------CCSS-------SCHHHHHHHHH
T ss_pred ----------------------hhhc--ccCceeEEEECCCCcCCccccccChhhhhccCcc-------chHHHHHHHHH
Confidence 0111 2468999999999998766444444444433332 45777899999
Q ss_pred HHHhhccCeEEEEEecC-CCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEEEecCC
Q 016734 290 SVALKQTFRWYTSMVGR-KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346 (384)
Q Consensus 290 S~~l~~~~~w~t~~vgk-~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~AWsf~~ 346 (384)
+.++++.+|++.+.+.. ..+...+.+.+++.|+ .+..+++.+|...+++++++-..
T Consensus 165 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 165 AFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGY-SVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp HGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTC-EEEEEEECCCC-CEEEEEEECCC
T ss_pred HHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCC-ceEEEEecCCCeEEEEEEEeccc
Confidence 99999999998776653 3578899999999999 57888999999999999987643
No 3
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.93 E-value=9e-25 Score=207.88 Aligned_cols=194 Identities=20% Similarity=0.212 Sum_probs=160.1
Q ss_pred hccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 70 ~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
.+|||+++.+.+++|+|| |+++.++.++.+.+.. ...+|||+|||+|+++..++...++++++|+|+|+
T Consensus 75 ~~f~~~~~~~~~~~~ipr-~~te~l~~~~l~~~~~----------~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~ 143 (276)
T 2b3t_A 75 REFWSLPLFVSPATLIPR-PDTECLVEQALARLPE----------QPCRILDLGTGTGAIALALASERPDCEIIAVDRMP 143 (276)
T ss_dssp EEETTEEEECCTTSCCCC-TTHHHHHHHHHHHSCS----------SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSH
T ss_pred eEECCceEEeCCCCcccC-chHHHHHHHHHHhccc----------CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCH
Confidence 379999999999999999 9999999999887641 24589999999999999999888899999999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 229 (384)
.+++.|++|++.++ +. ++.++.+|..+
T Consensus 144 ~~l~~a~~n~~~~~-~~-~v~~~~~d~~~--------------------------------------------------- 170 (276)
T 2b3t_A 144 DAVSLAQRNAQHLA-IK-NIHILQSDWFS--------------------------------------------------- 170 (276)
T ss_dssp HHHHHHHHHHHHHT-CC-SEEEECCSTTG---------------------------------------------------
T ss_pred HHHHHHHHHHHHcC-CC-ceEEEEcchhh---------------------------------------------------
Confidence 99999999999987 65 68988876421
Q ss_pred CcccccccCCCcEEEEEECCCcccchhhh------ccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEE
Q 016734 230 PVLVGVVRDGEQFDFCICNPPFFESMEEA------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303 (384)
Q Consensus 230 ~i~~~~~~~~~~fD~i~cNPPy~~s~~~~------~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~ 303 (384)
.+ ..++||+|+|||||+...+.. ..+|..++.|..+ ++.++..+++++..+++.+|++.++
T Consensus 171 ----~~--~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~-------g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 171 ----AL--AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADS-------GMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp ----GG--TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHH-------HTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----hc--ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCc-------HHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 01 145799999999999865411 1345444332221 4789999999999999999999998
Q ss_pred ecCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEEE
Q 016734 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342 (384)
Q Consensus 304 vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~AW 342 (384)
++ ..+.+.+.+.|++.|+..+.+..+..|+ .|+++|.
T Consensus 238 ~~-~~~~~~~~~~l~~~Gf~~v~~~~d~~g~-~r~~~~~ 274 (276)
T 2b3t_A 238 HG-WQQGEAVRQAFILAGYHDVETCRDYGDN-ERVTLGR 274 (276)
T ss_dssp CC-SSCHHHHHHHHHHTTCTTCCEEECTTSS-EEEEEEE
T ss_pred EC-chHHHHHHHHHHHCCCcEEEEEecCCCC-CcEEEEE
Confidence 88 7889999999999999989999999887 8888775
No 4
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.92 E-value=1.3e-24 Score=209.46 Aligned_cols=189 Identities=20% Similarity=0.248 Sum_probs=149.2
Q ss_pred hccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 70 ~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
.+|||++|.+.+++|+|| |+++.+++++.+.+... ...+|||+|||+|++++.++.. ++++|+|+|+|+
T Consensus 88 ~~f~~~~~~v~~~~lipr-~~te~lv~~~l~~~~~~---------~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~ 156 (284)
T 1nv8_A 88 KEFMGLSFLVEEGVFVPR-PETEELVELALELIRKY---------GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSS 156 (284)
T ss_dssp EEETTEEEECCTTSCCCC-TTHHHHHHHHHHHHHHH---------TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCH
T ss_pred eEECCeEEEeCCCceecC-hhHHHHHHHHHHHhccc---------CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCH
Confidence 469999999999999999 99999999999877531 2358999999999999999988 999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 229 (384)
.+++.|++|++.++ +.+++.++++|..+
T Consensus 157 ~al~~A~~n~~~~~-l~~~v~~~~~D~~~--------------------------------------------------- 184 (284)
T 1nv8_A 157 KAVEIARKNAERHG-VSDRFFVRKGEFLE--------------------------------------------------- 184 (284)
T ss_dssp HHHHHHHHHHHHTT-CTTSEEEEESSTTG---------------------------------------------------
T ss_pred HHHHHHHHHHHHcC-CCCceEEEECcchh---------------------------------------------------
Confidence 99999999999998 88889999987431
Q ss_pred CcccccccCCCcE---EEEEECCCcccchhhhccCCccccCCCcccccccCc--hHHHHHHHHHHHHHhhccCeEEEEEe
Q 016734 230 PVLVGVVRDGEQF---DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGG--ERAFITRIIEDSVALKQTFRWYTSMV 304 (384)
Q Consensus 230 ~i~~~~~~~~~~f---D~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GG--el~Fv~~ii~eS~~l~~~~~w~t~~v 304 (384)
.+ .++| |+|+|||||+...+ .+.+... .+....+.|| ++.|+++++. ..++.+||+.+++
T Consensus 185 ----~~---~~~f~~~D~IvsnPPyi~~~~--~l~~~v~---~ep~~al~~~~dgl~~~~~i~~---~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 185 ----PF---KEKFASIEMILSNPPYVKSSA--HLPKDVL---FEPPEALFGGEDGLDFYREFFG---RYDTSGKIVLMEI 249 (284)
T ss_dssp ----GG---GGGTTTCCEEEECCCCBCGGG--SCTTSCC---CSCHHHHBCTTTSCHHHHHHHH---HCCCTTCEEEEEC
T ss_pred ----hc---ccccCCCCEEEEcCCCCCccc--ccChhhc---cCcHHHhcCCCcHHHHHHHHHH---hcCCCCCEEEEEE
Confidence 01 1357 99999999998765 2222211 2233333444 3678877751 3445899999999
Q ss_pred cCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEEEe
Q 016734 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343 (384)
Q Consensus 305 gk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~AWs 343 (384)
| ..+.+++.+++++. .+..+..|+ .|+++++.
T Consensus 250 ~-~~q~~~v~~~~~~~-----~~~~D~~g~-~R~~~~~~ 281 (284)
T 1nv8_A 250 G-EDQVEELKKIVSDT-----VFLKDSAGK-YRFLLLNR 281 (284)
T ss_dssp C-TTCHHHHTTTSTTC-----EEEECTTSS-EEEEEEEC
T ss_pred C-chHHHHHHHHHHhC-----CeecccCCC-ceEEEEEE
Confidence 9 68899999888765 788899997 78877653
No 5
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.89 E-value=1.7e-23 Score=188.05 Aligned_cols=200 Identities=19% Similarity=0.205 Sum_probs=130.5
Q ss_pred EEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHH
Q 016734 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (384)
Q Consensus 77 ~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~ 156 (384)
|.+.+++++|+ |+++.++.++.+.+... ....+|||+|||+|.++..++...++++++|+|+|+.+++.|+
T Consensus 1 f~~~~~~~~p~-~~~~~~~~~~~~~l~~~--------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~ 71 (215)
T 4dzr_A 1 FEVGPDCLIPR-PDTEVLVEEAIRFLKRM--------PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVAR 71 (215)
T ss_dssp CBCSGGGGSCC-HHHHHHHHHHHHHHTTC--------CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------
T ss_pred CcCCCCccCCC-ccHHHHHHHHHHHhhhc--------CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 46789999999 99999999999988531 2456999999999999999999888899999999999999999
Q ss_pred HHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccc
Q 016734 157 KNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236 (384)
Q Consensus 157 ~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~ 236 (384)
+|+..++ + +++++.+|..+ .+....
T Consensus 72 ~~~~~~~-~--~~~~~~~d~~~----------------------------------------------------~~~~~~ 96 (215)
T 4dzr_A 72 RNAERFG-A--VVDWAAADGIE----------------------------------------------------WLIERA 96 (215)
T ss_dssp --------------CCHHHHHH----------------------------------------------------HHHHHH
T ss_pred HHHHHhC-C--ceEEEEcchHh----------------------------------------------------hhhhhh
Confidence 9999886 4 57776665321 010000
Q ss_pred cCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCc--hHHHHHHHHHHHHHhhccCeE-EEEEecCCCCHHHH
Q 016734 237 RDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGG--ERAFITRIIEDSVALKQTFRW-YTSMVGRKSNLKFL 313 (384)
Q Consensus 237 ~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GG--el~Fv~~ii~eS~~l~~~~~w-~t~~vgk~~~l~~l 313 (384)
...++||+|+|||||+.........+... ..+......|| ++.++..+++++.++++.+|+ +.+.++ ..+.+.+
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~ 173 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVR--DYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG-HNQADEV 173 (215)
T ss_dssp HTTCCBSEEEECCCCCC--------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT-TSCHHHH
T ss_pred hccCcccEEEECCCCCCCccccccChhhh--ccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC-CccHHHH
Confidence 02378999999999998654332211110 01111222222 478889999999999999999 777777 7889999
Q ss_pred HHHHH--HcCCeEEEEEEeeCCCeeEEEEEEec
Q 016734 314 ISKLR--KVGVTIVKTTEFVQGQTCRWGLAWSF 344 (384)
Q Consensus 314 ~~~L~--~~g~~~v~~~e~~qG~t~Rw~~AWsf 344 (384)
.+.++ +.|+..+.+.++..|+ .|++++|.-
T Consensus 174 ~~~l~~~~~gf~~~~~~~~~~~~-~r~~~~~~~ 205 (215)
T 4dzr_A 174 ARLFAPWRERGFRVRKVKDLRGI-DRVIAVTRE 205 (215)
T ss_dssp HHHTGGGGGGTEECCEEECTTSC-EEEEEEEEC
T ss_pred HHHHHHhhcCCceEEEEEecCCC-EEEEEEEEc
Confidence 99999 9999999999999887 899998864
No 6
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=3.2e-17 Score=154.25 Aligned_cols=167 Identities=19% Similarity=0.162 Sum_probs=112.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.++..++.+.+. +|+|+|+++.+++.|++|++.++ +.++++++++|..+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~----------------- 110 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKK----------------- 110 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGG-----------------
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHH-----------------
Confidence 568999999999999998877544 99999999999999999999998 88899999887432
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+...+ ..++||+|+|||||+........+|......+..+
T Consensus 111 -----------------------------------~~~~~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~--- 150 (259)
T 3lpm_A 111 -----------------------------------ITDLI--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHE--- 150 (259)
T ss_dssp -----------------------------------GGGTS--CTTCEEEEEECCCC------------------------
T ss_pred -----------------------------------hhhhh--ccCCccEEEECCCCCCCccccCCCCchHHHhhhcc---
Confidence 00001 25789999999999986332222221111111111
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEe--eCCCe-eEEEEEEecC
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF--VQGQT-CRWGLAWSFV 345 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~--~qG~t-~Rw~~AWsf~ 345 (384)
...-+..+++.+..+++.+|++.+.+. ..++.++.+.+++.|+...++... ..|+. .|.++.+...
T Consensus 151 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 151 ---VMCTLEDTIRVAASLLKQGGKANFVHR-PERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEC-TTTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred ---ccCCHHHHHHHHHHHccCCcEEEEEEc-HHHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 123456788888899999999977665 789999999999999875554433 23443 4555555543
No 7
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=7.9e-17 Score=152.49 Aligned_cols=171 Identities=15% Similarity=0.138 Sum_probs=114.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH---CCCCCCceEEEEcCCCCCCCcccccccCCc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS---NPHISELIEIRKVDNSESTPSIQESLTGKS 191 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~---n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~ 191 (384)
...+|||||||+|++++.++.+.++.+|+|+|+++.+++.|++|++. ++ +.++++++++|..+..+
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~---------- 104 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAK---------- 104 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHH----------
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhh----------
Confidence 34689999999999999999998889999999999999999999998 87 88889999998643000
Q ss_pred cccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcc-cccccCCCcEEEEEECCCcccchhhhccCCccccCCCc
Q 016734 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL-VGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTP 270 (384)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~-~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~ 270 (384)
... ..+ ..++||+|+|||||+.... ...|....
T Consensus 105 --------------------------------------~~~~~~~--~~~~fD~Vv~nPPy~~~~~--~~~~~~~~---- 138 (260)
T 2ozv_A 105 --------------------------------------ARVEAGL--PDEHFHHVIMNPPYNDAGD--RRTPDALK---- 138 (260)
T ss_dssp --------------------------------------HHHHTTC--CTTCEEEEEECCCC-------------------
T ss_pred --------------------------------------hhhhhcc--CCCCcCEEEECCCCcCCCC--CCCcCHHH----
Confidence 000 001 2468999999999998642 11121110
Q ss_pred ccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeC--CCe-eEEEEEEecCC
Q 016734 271 EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ--GQT-CRWGLAWSFVP 346 (384)
Q Consensus 271 ~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~q--G~t-~Rw~~AWsf~~ 346 (384)
.+...++ ......+++.+..+++.+|++.+.++ ..++.++.+.+++. +..+++..+.. ++. .|.++.+....
T Consensus 139 -~~a~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 139 -AEAHAMT-EGLFEDWIRTASAIMVSGGQLSLISR-PQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp ----------CCHHHHHHHHHHHEEEEEEEEEEEC-GGGHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred -HHHhhcC-cCCHHHHHHHHHHHcCCCCEEEEEEc-HHHHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 1111111 11256678888889999999988777 67899999999875 76666665543 332 55566666644
No 8
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.70 E-value=6.2e-16 Score=136.89 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=113.4
Q ss_pred CCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH
Q 016734 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (384)
Q Consensus 82 ~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~ 161 (384)
.+++|+ |+++.++.++... . ....+|||+|||+|.++..++... +++|+|+|+.+++.
T Consensus 2 ~v~~P~-~~~~~l~~~l~~~-~----------~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------- 59 (170)
T 3q87_B 2 DWYEPG-EDTYTLMDALERE-G----------LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------- 59 (170)
T ss_dssp CSCCCC-HHHHHHHHHHHHH-T----------CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------
T ss_pred cccCcC-ccHHHHHHHHHhh-c----------CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------
Confidence 579999 9999988885432 1 123589999999999998888665 99999999999987
Q ss_pred CCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCc
Q 016734 162 NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241 (384)
Q Consensus 162 n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~ 241 (384)
. .+++++.+|..+ .+ .+++
T Consensus 60 ~----~~~~~~~~d~~~-------------------------------------------------------~~--~~~~ 78 (170)
T 3q87_B 60 H----RGGNLVRADLLC-------------------------------------------------------SI--NQES 78 (170)
T ss_dssp C----SSSCEEECSTTT-------------------------------------------------------TB--CGGG
T ss_pred c----cCCeEEECChhh-------------------------------------------------------hc--ccCC
Confidence 1 247788887431 01 1368
Q ss_pred EEEEEECCCcccchhhhccCCccccCCCcccccccCc--hHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHH
Q 016734 242 FDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGG--ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319 (384)
Q Consensus 242 fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GG--el~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~ 319 (384)
||+|+|||||+...+... ..|| ...++.++++.. ++|++........+.+++.+.|++
T Consensus 79 fD~i~~n~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l-----pgG~l~~~~~~~~~~~~l~~~l~~ 138 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI---------------IGGGYLGREVIDRFVDAV-----TVGMLYLLVIEANRPKEVLARLEE 138 (170)
T ss_dssp CSEEEECCCCBTTCCCTT---------------TBCCGGGCHHHHHHHHHC-----CSSEEEEEEEGGGCHHHHHHHHHH
T ss_pred CCEEEECCCCccCCcccc---------------ccCCcchHHHHHHHHhhC-----CCCEEEEEEecCCCHHHHHHHHHH
Confidence 999999999997643211 1222 356777776665 677776655557899999999999
Q ss_pred cCCeEEEEEEeeCCCeeE
Q 016734 320 VGVTIVKTTEFVQGQTCR 337 (384)
Q Consensus 320 ~g~~~v~~~e~~qG~t~R 337 (384)
.|+..+.+.+...|. .|
T Consensus 139 ~gf~~~~~~~~~~~~-e~ 155 (170)
T 3q87_B 139 RGYGTRILKVRKILG-ET 155 (170)
T ss_dssp TTCEEEEEEEEECSS-SE
T ss_pred CCCcEEEEEeeccCC-ce
Confidence 999988988888886 44
No 9
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.63 E-value=6.2e-15 Score=139.75 Aligned_cols=171 Identities=14% Similarity=0.092 Sum_probs=129.7
Q ss_pred HhhccCCcEEEecCC--CccCCCcCHHHHHHHHHHH------------hccCCCCCCCCCCCCCeEEEECCcccHHHHHH
Q 016734 68 LLLHDHGLNWWIPDG--QLCPTVPNRSNYIHWIEDL------------LSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133 (384)
Q Consensus 68 lL~~~fgl~~~vp~~--~LiPrvP~r~~yi~~i~dl------------l~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~L 133 (384)
++-.+||..+.++.+ +++|+ |.++.|+..+... +.... -....+|||+|||+|.++..+
T Consensus 58 i~g~~~g~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~VLDiG~G~G~~~~~l 130 (277)
T 1o54_A 58 VFEKGPGEIIRTSAGKKGYILI-PSLIDEIMNMKRRTQIVYPKDSSFIAMMLD------VKEGDRIIDTGVGSGAMCAVL 130 (277)
T ss_dssp HTTSCTTCEEECTTCCEEEEEC-CCHHHHHHTCCC-CCCCCHHHHHHHHHHTT------CCTTCEEEEECCTTSHHHHHH
T ss_pred hcCCCCCcEEEEcCCcEEEEeC-CCHHHHHhhccccCCccCHHHHHHHHHHhC------CCCCCEEEEECCcCCHHHHHH
Confidence 455689999999998 89999 9999887532211 11100 123458999999999999999
Q ss_pred Hhh-ccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCC
Q 016734 134 GAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212 (384)
Q Consensus 134 a~~-~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (384)
+.. .++.+++++|+++.+++.|++|++.++ +.+++.++.+|..+
T Consensus 131 a~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------------------------- 175 (277)
T 1o54_A 131 ARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISE---------------------------------- 175 (277)
T ss_dssp HHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGG----------------------------------
T ss_pred HHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHH----------------------------------
Confidence 887 567899999999999999999999987 76789988776321
Q ss_pred CCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHH
Q 016734 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292 (384)
Q Consensus 213 ~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~ 292 (384)
.+ ..+.||+|+||||.. ..++++...
T Consensus 176 ---------------------~~--~~~~~D~V~~~~~~~-------------------------------~~~l~~~~~ 201 (277)
T 1o54_A 176 ---------------------GF--DEKDVDALFLDVPDP-------------------------------WNYIDKCWE 201 (277)
T ss_dssp ---------------------CC--SCCSEEEEEECCSCG-------------------------------GGTHHHHHH
T ss_pred ---------------------cc--cCCccCEEEECCcCH-------------------------------HHHHHHHHH
Confidence 01 235799999998732 122344556
Q ss_pred hhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC
Q 016734 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334 (384)
Q Consensus 293 l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~ 334 (384)
+++.+|++.+......++..+.+.|++.|+..+++.++..+.
T Consensus 202 ~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~ 243 (277)
T 1o54_A 202 ALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRP 243 (277)
T ss_dssp HEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCCCC
T ss_pred HcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEeeee
Confidence 778899988888766788899999999999988888776443
No 10
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.62 E-value=2.3e-15 Score=132.64 Aligned_cols=95 Identities=17% Similarity=0.071 Sum_probs=80.3
Q ss_pred hccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 70 ~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
.+++|+.+.++++. .|+ |.+..++.++.+.+... ....+|||+|||+|.++..++. .+..+|+|+|+|+
T Consensus 9 g~~~~~~~~~~~~~-~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~ 77 (187)
T 2fhp_A 9 GEYGGRRLKALDGD-NTR-PTTDKVKESIFNMIGPY--------FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNF 77 (187)
T ss_dssp STTTTCBCCCCCCC-SSC-CCCHHHHHHHHHHHCSC--------CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCH
T ss_pred ccccCccccCCCCC-CcC-cCHHHHHHHHHHHHHhh--------cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCH
Confidence 46789999999887 888 99999999999888531 1346899999999999887765 4557999999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+++.|++|+..++ +.++++++.+|.
T Consensus 78 ~~~~~a~~~~~~~~-~~~~~~~~~~d~ 103 (187)
T 2fhp_A 78 AALKVIKENIAITK-EPEKFEVRKMDA 103 (187)
T ss_dssp HHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHhC-CCcceEEEECcH
Confidence 99999999999997 777899998874
No 11
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=1.3e-14 Score=129.37 Aligned_cols=94 Identities=9% Similarity=0.019 Sum_probs=73.0
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
.+.|..+.+|+ ..+| |.+..+.+++.+.+.... .....+|||+|||+|.++..++.. ...+|+|+|+|+.
T Consensus 9 ~~~g~~l~~~~--~~~r-p~~~~~~~~l~~~l~~~~------~~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~ 78 (189)
T 3p9n_A 9 VAGGRRIAVPP--RGTR-PTTDRVRESLFNIVTARR------DLTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQR 78 (189)
T ss_dssp TTTTCEEECCS--CCC----CHHHHHHHHHHHHHHS------CCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHH
T ss_pred ccCCcEecCCC--CCCc-cCcHHHHHHHHHHHHhcc------CCCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHH
Confidence 46788999998 6777 888888888887775310 013468999999999998866653 4568999999999
Q ss_pred HHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 151 al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
+++.|++|++.++ + ++++++++|.
T Consensus 79 ~~~~a~~~~~~~~-~-~~v~~~~~d~ 102 (189)
T 3p9n_A 79 SAAVIARNIEALG-L-SGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHT-C-SCEEEEESCH
T ss_pred HHHHHHHHHHHcC-C-CceEEEEccH
Confidence 9999999999997 6 6799999874
No 12
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.58 E-value=6.5e-14 Score=139.45 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=113.8
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|-++.+...+..+. . ....+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++|++.++ +.++
T Consensus 201 ~l~~~la~~l~~~~-~---------~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~ 269 (373)
T 3tm4_A 201 HLKASIANAMIELA-E---------LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDK 269 (373)
T ss_dssp CCCHHHHHHHHHHH-T---------CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGG
T ss_pred CccHHHHHHHHHhh-c---------CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCc
Confidence 34566666666655 2 13458999999999999888876554589999999999999999999998 8788
Q ss_pred eEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEEC
Q 016734 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248 (384)
Q Consensus 169 I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cN 248 (384)
|+++++|..+ +....++||+|+||
T Consensus 270 i~~~~~D~~~--------------------------------------------------------~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 270 IKFIQGDATQ--------------------------------------------------------LSQYVDSVDFAISN 293 (373)
T ss_dssp CEEEECCGGG--------------------------------------------------------GGGTCSCEEEEEEE
T ss_pred eEEEECChhh--------------------------------------------------------CCcccCCcCEEEEC
Confidence 9999987431 00124689999999
Q ss_pred CCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEE
Q 016734 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328 (384)
Q Consensus 249 PPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~ 328 (384)
|||...... ..+ -..++..++++..+++ ++|...... +...+.+.+.+.|+...+..
T Consensus 294 pPyg~r~~~------------~~~------~~~ly~~~~~~l~r~l--~g~~~~i~~---~~~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 294 LPYGLKIGK------------KSM------IPDLYMKFFNELAKVL--EKRGVFITT---EKKAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp CCCC------------------CC------HHHHHHHHHHHHHHHE--EEEEEEEES---CHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCcccCc------------chh------HHHHHHHHHHHHHHHc--CCeEEEEEC---CHHHHHHHHHHcCCEEEEEE
Confidence 999753211 110 1345677888877766 455444443 66778888999999988888
Q ss_pred EeeCCCe
Q 016734 329 EFVQGQT 335 (384)
Q Consensus 329 e~~qG~t 335 (384)
.+..|..
T Consensus 351 ~~~nG~l 357 (373)
T 3tm4_A 351 VIGHGGL 357 (373)
T ss_dssp EEEETTE
T ss_pred EEEcCCE
Confidence 8988874
No 13
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.56 E-value=3.8e-14 Score=129.03 Aligned_cols=165 Identities=12% Similarity=0.124 Sum_probs=115.5
Q ss_pred cCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHH
Q 016734 80 PDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 80 p~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni 159 (384)
.+.+++|+ |++. ...|. +++.. ...+|||||||+|+++..++...++++++|+|+++.+++.|++|+
T Consensus 19 ~~~~~~~~-p~~~-~~~~~-~~f~~----------~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~ 85 (214)
T 1yzh_A 19 NPQYVVLN-PLEA-KAKWR-DLFGN----------DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV 85 (214)
T ss_dssp CTTTEECC-GGGT-TTTHH-HHHTS----------CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEecC-hhhc-ccCHH-HHcCC----------CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH
Confidence 35678888 7752 23444 33321 345899999999999999999989999999999999999999999
Q ss_pred HHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCC
Q 016734 160 KSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239 (384)
Q Consensus 160 ~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~ 239 (384)
..++ + +++.++.+|..+ +...+ ..
T Consensus 86 ~~~~-~-~~v~~~~~d~~~----------------------------------------------------~~~~~--~~ 109 (214)
T 1yzh_A 86 LEVG-V-PNIKLLWVDGSD----------------------------------------------------LTDYF--ED 109 (214)
T ss_dssp HHHC-C-SSEEEEECCSSC----------------------------------------------------GGGTS--CT
T ss_pred HHcC-C-CCEEEEeCCHHH----------------------------------------------------HHhhc--CC
Confidence 9987 6 579999887532 00001 24
Q ss_pred CcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHH
Q 016734 240 EQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319 (384)
Q Consensus 240 ~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~ 319 (384)
++||+|+||+|--... ....+. ......++++...+++.+|++.+..........+.+.+.+
T Consensus 110 ~~~D~i~~~~~~~~~~--~~~~~~----------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 171 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPK--KRHEKR----------------RLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQ 171 (214)
T ss_dssp TCCSEEEEESCCCCCS--GGGGGG----------------STTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccc--cchhhh----------------ccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 5799999998732100 000000 0124556677777888999987777544567888899999
Q ss_pred cCCeEEEEEEee
Q 016734 320 VGVTIVKTTEFV 331 (384)
Q Consensus 320 ~g~~~v~~~e~~ 331 (384)
.|+..+.+..+.
T Consensus 172 ~g~~~~~~~~d~ 183 (214)
T 1yzh_A 172 YGMKLNGVWLDL 183 (214)
T ss_dssp HTCEEEEEESSG
T ss_pred CCCeeeeccccc
Confidence 999876665443
No 14
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=1e-13 Score=136.34 Aligned_cols=163 Identities=16% Similarity=0.108 Sum_probs=116.7
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|-++.+...+..+... ....++||+|||+|.+.+.++... ++.+++|+|+|+.+++.|++|++.++ +.
T Consensus 186 ~l~~~la~~l~~~~~~---------~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~- 254 (354)
T 3tma_A 186 SLTPVLAQALLRLADA---------RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS- 254 (354)
T ss_dssp SCCHHHHHHHHHHTTC---------CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-
T ss_pred CcCHHHHHHHHHHhCC---------CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-
Confidence 5556666666665532 234589999999999999988877 78899999999999999999999998 76
Q ss_pred ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEE
Q 016734 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247 (384)
Q Consensus 168 ~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~c 247 (384)
+|+++++|..+ +....+.||+|+|
T Consensus 255 ~i~~~~~D~~~--------------------------------------------------------~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 255 WIRFLRADARH--------------------------------------------------------LPRFFPEVDRILA 278 (354)
T ss_dssp TCEEEECCGGG--------------------------------------------------------GGGTCCCCSEEEE
T ss_pred ceEEEeCChhh--------------------------------------------------------CccccCCCCEEEE
Confidence 89999987432 0012345899999
Q ss_pred CCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEE
Q 016734 248 NPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 248 NPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~ 327 (384)
||||...... .. .-..++..++++..++++.+|.+....+ +...+.+.++ .|+...+.
T Consensus 279 npPyg~r~~~------------~~------~~~~~~~~~~~~~~~~LkpgG~l~i~t~---~~~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 279 NPPHGLRLGR------------KE------GLFHLYWDFLRGALALLPPGGRVALLTL---RPALLKRALP-PGFALRHA 336 (354)
T ss_dssp CCCSCC----------------CH------HHHHHHHHHHHHHHHTSCTTCEEEEEES---CHHHHHHHCC-TTEEEEEE
T ss_pred CCCCcCccCC------------cc------cHHHHHHHHHHHHHHhcCCCcEEEEEeC---CHHHHHHHhh-cCcEEEEE
Confidence 9999643210 00 0245678888888888888777766655 3333444455 88887788
Q ss_pred EEeeCCCeeEEEE
Q 016734 328 TEFVQGQTCRWGL 340 (384)
Q Consensus 328 ~e~~qG~t~Rw~~ 340 (384)
..+..|...+.++
T Consensus 337 ~~l~~g~l~~~i~ 349 (354)
T 3tma_A 337 RVVEQGGVYPRVF 349 (354)
T ss_dssp EECCBTTBCCEEE
T ss_pred EEEEeCCEEEEEE
Confidence 8888887655433
No 15
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=2.4e-13 Score=119.35 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=116.4
Q ss_pred EEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHH
Q 016734 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (384)
Q Consensus 76 ~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A 155 (384)
.+..+.+.+.|+..+ ....++.+.+.. ....+|||+|||+|.++..++.. +.+++|+|+++.+++.|
T Consensus 24 ~~~~~~~~~~~~~~~--~~~~~l~~~~~~---------~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 24 KFKTDSGVFSYGKVD--KGTKILVENVVV---------DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLA 90 (194)
T ss_dssp EEEEETTSTTTTSCC--HHHHHHHHHCCC---------CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHH
T ss_pred EEEeCCCcCCccccc--hHHHHHHHHccc---------CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHH
Confidence 356678888887332 233445555432 13468999999999998888766 78999999999999999
Q ss_pred HHHHHHCCCCCC-ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccc
Q 016734 156 EKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234 (384)
Q Consensus 156 ~~Ni~~n~~l~~-~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~ 234 (384)
++|+..++ +.+ ++.++.+|..+ .+
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~d~~~----------------------------------------------------~~-- 115 (194)
T 1dus_A 91 KENIKLNN-LDNYDIRVVHSDLYE----------------------------------------------------NV-- 115 (194)
T ss_dssp HHHHHHTT-CTTSCEEEEECSTTT----------------------------------------------------TC--
T ss_pred HHHHHHcC-CCccceEEEECchhc----------------------------------------------------cc--
Confidence 99999987 654 69998887431 00
Q ss_pred cccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHH
Q 016734 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314 (384)
Q Consensus 235 ~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~ 314 (384)
..++||+|+|||||+.. ......++++..++++.+|++............+.
T Consensus 116 ---~~~~~D~v~~~~~~~~~-------------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~ 167 (194)
T 1dus_A 116 ---KDRKYNKIITNPPIRAG-------------------------KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLA 167 (194)
T ss_dssp ---TTSCEEEEEECCCSTTC-------------------------HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHH
T ss_pred ---ccCCceEEEECCCcccc-------------------------hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHH
Confidence 14579999999999742 11245566777778888888877666566677788
Q ss_pred HHHHHcCCeEEEEEEeeCC
Q 016734 315 SKLRKVGVTIVKTTEFVQG 333 (384)
Q Consensus 315 ~~L~~~g~~~v~~~e~~qG 333 (384)
+.|++. +..++++....|
T Consensus 168 ~~l~~~-~~~~~~~~~~~~ 185 (194)
T 1dus_A 168 KYMKDV-FGNVETVTIKGG 185 (194)
T ss_dssp HHHHHH-HSCCEEEEEETT
T ss_pred HHHHHH-hcceEEEecCCc
Confidence 888887 556676665544
No 16
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=2.2e-13 Score=136.08 Aligned_cols=153 Identities=15% Similarity=0.095 Sum_probs=104.2
Q ss_pred CCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHH
Q 016734 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152 (384)
Q Consensus 73 fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al 152 (384)
.++.+...++++.+.-.... ..++.+.+.. ....+|||+|||+|.++..++...|+.+|+|+|+|+.++
T Consensus 191 ~~~~~~~~pg~Fs~~~~d~~--~~~ll~~l~~---------~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al 259 (375)
T 4dcm_A 191 TDWTIHNHANVFSRTGLDIG--ARFFMQHLPE---------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 259 (375)
T ss_dssp TTEEEEECTTCTTCSSCCHH--HHHHHHTCCC---------SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHH
T ss_pred CceEEEeCCCcccCCcccHH--HHHHHHhCcc---------cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHH
Confidence 45667777788877422211 1122333321 133689999999999999999998899999999999999
Q ss_pred HHHHHHHHHCCCCCC--ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCC
Q 016734 153 EWAEKNVKSNPHISE--LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230 (384)
Q Consensus 153 ~~A~~Ni~~n~~l~~--~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 230 (384)
+.|++|++.|+ +.+ ++.++.+|..+
T Consensus 260 ~~Ar~n~~~ng-l~~~~~v~~~~~D~~~---------------------------------------------------- 286 (375)
T 4dcm_A 260 ASSRLNVETNM-PEALDRCEFMINNALS---------------------------------------------------- 286 (375)
T ss_dssp HHHHHHHHHHC-GGGGGGEEEEECSTTT----------------------------------------------------
T ss_pred HHHHHHHHHcC-CCcCceEEEEechhhc----------------------------------------------------
Confidence 99999999997 664 47778777431
Q ss_pred cccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCH
Q 016734 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNL 310 (384)
Q Consensus 231 i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l 310 (384)
.+ ..++||+|+|||||+...... . ....++++++.++++.+|.+.+...+....
T Consensus 287 ---~~--~~~~fD~Ii~nppfh~~~~~~-----------~----------~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 287 ---GV--EPFRFNAVLCNPPFHQQHALT-----------D----------NVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp ---TC--CTTCEEEEEECCCC------------------C----------CHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred ---cC--CCCCeeEEEECCCcccCcccC-----------H----------HHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 11 246899999999998632110 0 113467788888889999887766655555
Q ss_pred HHHHH
Q 016734 311 KFLIS 315 (384)
Q Consensus 311 ~~l~~ 315 (384)
....+
T Consensus 341 ~~~l~ 345 (375)
T 4dcm_A 341 FHKLK 345 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 17
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.52 E-value=2.3e-13 Score=138.17 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=78.0
Q ss_pred CcEEEecCCCccCCC-cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHH
Q 016734 74 GLNWWIPDGQLCPTV-PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152 (384)
Q Consensus 74 gl~~~vp~~~LiPrv-P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al 152 (384)
|++|.++++.++|.. +.++.++.++.+.+.. ....+|||+|||+|.+++.|+.. ..+|+|+|+|+.|+
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~---------~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al 321 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDV---------QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALV 321 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTC---------CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcC---------CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHH
Confidence 899999999999952 4588889998888753 13458999999999999999876 67999999999999
Q ss_pred HHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 153 EWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 153 ~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+.|++|++.|+ +. ++.++.+|..
T Consensus 322 ~~A~~n~~~~~-~~-~v~f~~~d~~ 344 (433)
T 1uwv_A 322 EKGQQNARLNG-LQ-NVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHTT-CC-SEEEEECCTT
T ss_pred HHHHHHHHHcC-CC-ceEEEECCHH
Confidence 99999999997 65 7999998854
No 18
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.51 E-value=4.2e-13 Score=134.40 Aligned_cols=152 Identities=14% Similarity=0.179 Sum_probs=112.7
Q ss_pred cEEEecCCCcc---CCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 75 LNWWIPDGQLC---PTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 75 l~~~vp~~~Li---PrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
+.|...++++. +. |.+..++.++.+.+... .....+|||+|||+|.++..++.. +++|+|+|+|+.+
T Consensus 198 ~~~~~~pgvFs~~~~d-~~t~~ll~~l~~~l~~~-------~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~a 267 (381)
T 3dmg_A 198 YTFHHLPGVFSAGKVD-PASLLLLEALQERLGPE-------GVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLAS 267 (381)
T ss_dssp EEEEECTTCTTTTSCC-HHHHHHHHHHHHHHCTT-------TTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHH
T ss_pred EEEEeCCCceeCCCCC-HHHHHHHHHHHHhhccc-------CCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHH
Confidence 35777888888 55 77888888888776421 123468999999999999888865 6799999999999
Q ss_pred HHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCc
Q 016734 152 LEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231 (384)
Q Consensus 152 l~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i 231 (384)
++.|++|++.|+ +. ++++.+|..+ .
T Consensus 268 l~~A~~n~~~~~-~~--v~~~~~D~~~----------------------------------------------------~ 292 (381)
T 3dmg_A 268 VLSLQKGLEANA-LK--AQALHSDVDE----------------------------------------------------A 292 (381)
T ss_dssp HHHHHHHHHHTT-CC--CEEEECSTTT----------------------------------------------------T
T ss_pred HHHHHHHHHHcC-CC--eEEEEcchhh----------------------------------------------------c
Confidence 999999999997 54 8888887532 0
Q ss_pred ccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHH
Q 016734 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311 (384)
Q Consensus 232 ~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~ 311 (384)
....++||+|+|||||+..... .......+++++.++++.+|++...........
T Consensus 293 ----~~~~~~fD~Ii~npp~~~~~~~---------------------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~ 347 (381)
T 3dmg_A 293 ----LTEEARFDIIVTNPPFHVGGAV---------------------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYE 347 (381)
T ss_dssp ----SCTTCCEEEEEECCCCCTTCSS---------------------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHH
T ss_pred ----cccCCCeEEEEECCchhhcccc---------------------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChH
Confidence 0124689999999999752110 123466788888889999999877776555555
Q ss_pred HHHHH
Q 016734 312 FLISK 316 (384)
Q Consensus 312 ~l~~~ 316 (384)
.+++.
T Consensus 348 ~~l~~ 352 (381)
T 3dmg_A 348 PLLEE 352 (381)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 19
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.51 E-value=3.5e-13 Score=132.58 Aligned_cols=173 Identities=13% Similarity=0.149 Sum_probs=118.7
Q ss_pred cCCcEEEecCCCccCC--CcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 72 DHGLNWWIPDGQLCPT--VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPr--vP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..|+.|.++....-.+ .|++.....|+.+++... ....+|||+|||+|.+++.++.. +++|+|+|+|+
T Consensus 116 e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~--------~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~ 185 (332)
T 2igt_A 116 LLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETA--------DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASK 185 (332)
T ss_dssp ETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHS--------SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCH
T ss_pred ECCEEEEEecCccccceechHHHHHHHHHHHHHHhc--------CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCH
Confidence 3577787777655555 577777778888877421 13458999999999999888764 55999999999
Q ss_pred HHHHHHHHHHHHCCCCCC-ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCC
Q 016734 150 VALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~-~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 228 (384)
.+++.|++|++.|+ +.+ ++.++.+|..+
T Consensus 186 ~al~~a~~n~~~~g-l~~~~v~~i~~D~~~-------------------------------------------------- 214 (332)
T 2igt_A 186 KAIGWAKENQVLAG-LEQAPIRWICEDAMK-------------------------------------------------- 214 (332)
T ss_dssp HHHHHHHHHHHHHT-CTTSCEEEECSCHHH--------------------------------------------------
T ss_pred HHHHHHHHHHHHcC-CCccceEEEECcHHH--------------------------------------------------
Confidence 99999999999998 776 59998877321
Q ss_pred CCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCC
Q 016734 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308 (384)
Q Consensus 229 ~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~ 308 (384)
++.......++||+|+||||||...... ++. .....+..+++++..+++.+|++.+......
T Consensus 215 --~l~~~~~~~~~fD~Ii~dPP~~~~~~~~-------------~~~---~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 215 --FIQREERRGSTYDIILTDPPKFGRGTHG-------------EVW---QLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp --HHHHHHHHTCCBSEEEECCCSEEECTTC-------------CEE---EHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred --HHHHHHhcCCCceEEEECCccccCCchH-------------HHH---HHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 1111111146899999999988643110 000 0244567788888888898888655554222
Q ss_pred --CHHHHHHHHH----HcCCe
Q 016734 309 --NLKFLISKLR----KVGVT 323 (384)
Q Consensus 309 --~l~~l~~~L~----~~g~~ 323 (384)
....+.+.++ +.|..
T Consensus 277 ~~~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 277 RASFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp TSCHHHHHHHHHHHTTTSCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCe
Confidence 3455555555 56654
No 20
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.49 E-value=1.9e-13 Score=127.99 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=98.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|+|||||+|++++.++...+..+|+|+|+++.+++.|++|++.|+ +.++|+++.+|..+
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l~----------------- 77 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGLA----------------- 77 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGG-----------------
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchhh-----------------
Confidence 358999999999999999988788899999999999999999999998 88899999987431
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
++. ..+.||+|+.. +
T Consensus 78 --------------------------------------~l~-~~~~~D~Ivia----------G---------------- 92 (225)
T 3kr9_A 78 --------------------------------------AFE-ETDQVSVITIA----------G---------------- 92 (225)
T ss_dssp --------------------------------------GCC-GGGCCCEEEEE----------E----------------
T ss_pred --------------------------------------hcc-cCcCCCEEEEc----------C----------------
Confidence 111 12258876631 0
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~ 327 (384)
.|| ..+.+|++++...+..++|+.. ........+.+.|.+.||..+..
T Consensus 93 ~Gg--~~i~~Il~~~~~~L~~~~~lVl--q~~~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 93 MGG--RLIARILEEGLGKLANVERLIL--QPNNREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp ECH--HHHHHHHHHTGGGCTTCCEEEE--EESSCHHHHHHHHHHTTEEEEEE
T ss_pred CCh--HHHHHHHHHHHHHhCCCCEEEE--ECCCCHHHHHHHHHHCCCEEEEE
Confidence 133 3488899999888888899643 33578999999999999865443
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.48 E-value=7e-13 Score=119.37 Aligned_cols=128 Identities=14% Similarity=0.043 Sum_probs=101.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|.++..++...+..+++|+|+|+.+++.|++|++.++ + ++++++.+|..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~---------------- 101 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFAPE---------------- 101 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCTTT----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCChhh----------------
Confidence 3468999999999999999988888999999999999999999999987 6 679999887532
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
.+ ...+.||+|+|++++..
T Consensus 102 ------------------------------------~~----~~~~~~D~i~~~~~~~~--------------------- 120 (204)
T 3e05_A 102 ------------------------------------GL----DDLPDPDRVFIGGSGGM--------------------- 120 (204)
T ss_dssp ------------------------------------TC----TTSCCCSEEEESCCTTC---------------------
T ss_pred ------------------------------------hh----hcCCCCCEEEECCCCcC---------------------
Confidence 00 01256999999986630
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEe
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
...++++..++++++|++.+......+...+.+.|++.|+ .+++.+.
T Consensus 121 --------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~ 167 (204)
T 3e05_A 121 --------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEVACV 167 (204)
T ss_dssp --------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred --------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeEEEE
Confidence 3456677777888888887665556788999999999998 6666554
No 22
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.48 E-value=5.5e-13 Score=126.22 Aligned_cols=125 Identities=17% Similarity=0.160 Sum_probs=98.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|+|++.|+...+..+|+|+|+|+.+++.|++|++.|+ +.++|+++.+|..+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l~----------------- 83 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGLA----------------- 83 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGG-----------------
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchhh-----------------
Confidence 358999999999999999988777799999999999999999999998 88899999988432
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
.+. .++.||+|+.- +
T Consensus 84 --------------------------------------~~~-~~~~~D~Ivia----------g---------------- 98 (244)
T 3gnl_A 84 --------------------------------------VIE-KKDAIDTIVIA----------G---------------- 98 (244)
T ss_dssp --------------------------------------GCC-GGGCCCEEEEE----------E----------------
T ss_pred --------------------------------------ccC-ccccccEEEEe----------C----------------
Confidence 111 12358987630 0
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~ 327 (384)
.| -..+.+|++++...++..+|| .+........+.+.|.+.||..+.-
T Consensus 99 mG--g~lI~~IL~~~~~~L~~~~~l--Ilq~~~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 99 MG--GTLIRTILEEGAAKLAGVTKL--ILQPNIAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp EC--HHHHHHHHHHTGGGGTTCCEE--EEEESSCHHHHHHHHHHHTEEEEEE
T ss_pred Cc--hHHHHHHHHHHHHHhCCCCEE--EEEcCCChHHHHHHHHHCCCEEEEE
Confidence 11 256888999998888888886 4444678999999999999875443
No 23
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.48 E-value=5.4e-14 Score=121.79 Aligned_cols=91 Identities=13% Similarity=0.116 Sum_probs=73.3
Q ss_pred hccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 70 ~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
-.++|..+.++++ ++ |.+..+..++.+.+.... ....+|||+|||+|.++..++... ..++|+|+|+
T Consensus 7 g~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~-------~~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~ 73 (171)
T 1ws6_A 7 GKARGVALKVPAS---AR-PSPVRLRKALFDYLRLRY-------PRRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDP 73 (171)
T ss_dssp GGGTTCEECCCTT---CC-CCCHHHHHHHHHHHHHHC-------TTCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCH
T ss_pred cccCCeEecCCCC---CC-CCHHHHHHHHHHHHHhhc-------cCCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCH
Confidence 4678999999999 66 777788888877765310 134589999999999998888764 4599999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+++.|++|+..++ + +++++.+|.
T Consensus 74 ~~~~~a~~~~~~~~-~--~~~~~~~d~ 97 (171)
T 1ws6_A 74 EAVRLLKENVRRTG-L--GARVVALPV 97 (171)
T ss_dssp HHHHHHHHHHHHHT-C--CCEEECSCH
T ss_pred HHHHHHHHHHHHcC-C--ceEEEeccH
Confidence 99999999999887 5 688887763
No 24
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=8.9e-14 Score=129.66 Aligned_cols=48 Identities=25% Similarity=0.250 Sum_probs=43.5
Q ss_pred CCCeEEEECCcccHHHHHHHhh--ccCCEEEEEeCcHHHHHHHHHHHHHC
Q 016734 115 DKVKGFDIGTGANCIYPLLGAS--LLGWSFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~--~~~~~v~gvDid~~al~~A~~Ni~~n 162 (384)
...+|||+|||+|.++..++.. .++++|+|+|+|+.+++.|++|+..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 3568999999999999999887 67789999999999999999999876
No 25
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.47 E-value=1.4e-12 Score=116.49 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=86.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
..+|||+|||+|.++..++... +..+++|+|+++.+++.|++|++.++ +.++++++.+|..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------- 85 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQN---------------- 85 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGG----------------
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHH----------------
Confidence 4589999999999999888875 56799999999999999999999997 77789999887421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+ ... ..++||+|+|||||++..+.... .
T Consensus 86 ------------------------------------~-~~~--~~~~fD~v~~~~~~~~~~~~~~~------~------- 113 (197)
T 3eey_A 86 ------------------------------------M-DKY--IDCPVKAVMFNLGYLPSGDHSIS------T------- 113 (197)
T ss_dssp ------------------------------------G-GGT--CCSCEEEEEEEESBCTTSCTTCB------C-------
T ss_pred ------------------------------------H-hhh--ccCCceEEEEcCCcccCcccccc------c-------
Confidence 0 001 24689999999999764321110 0
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEe
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v 304 (384)
...-...++++..++++.+|++....
T Consensus 114 ----~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 114 ----RPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp ----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 11123456777888888888876554
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=1.8e-13 Score=120.18 Aligned_cols=87 Identities=10% Similarity=-0.026 Sum_probs=61.3
Q ss_pred EecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 78 WIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 78 ~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..|+ ..++| |.+..+..++.+.+... ....+|||+|||+|.++..++.. +..+++|+|+|+.+++.|++
T Consensus 4 ~~p~-~~~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~ 72 (177)
T 2esr_A 4 KTLD-GKITR-PTSDKVRGAIFNMIGPY--------FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQD 72 (177)
T ss_dssp ----------------CHHHHHHHHCSC--------CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHH
T ss_pred cCCC-CCCCC-cCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHH
Confidence 3444 46788 88888888988888531 13468999999999998888765 55799999999999999999
Q ss_pred HHHHCCCCCCceEEEEcCC
Q 016734 158 NVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 158 Ni~~n~~l~~~I~~~~~d~ 176 (384)
|++.++ +.+++.++.+|.
T Consensus 73 ~~~~~~-~~~~~~~~~~d~ 90 (177)
T 2esr_A 73 NIIMTK-AENRFTLLKMEA 90 (177)
T ss_dssp HHHTTT-CGGGEEEECSCH
T ss_pred HHHHcC-CCCceEEEECcH
Confidence 999997 777899987763
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.45 E-value=1.4e-12 Score=116.86 Aligned_cols=59 Identities=24% Similarity=0.275 Sum_probs=53.4
Q ss_pred CeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.+|||||||+|.++..++.. ++.+++|+|+++.+++.|++++..++ +.+++.++.+|..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDVH 103 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBTT
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCHH
Confidence 39999999999999888877 78899999999999999999999997 7778999998753
No 28
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=1.5e-12 Score=122.32 Aligned_cols=124 Identities=16% Similarity=0.211 Sum_probs=97.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|+|||||+|++++.++...+..+|+|+|+++.+++.|++|++.|+ +.++|+++.+|..+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l~----------------- 83 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGLS----------------- 83 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGG-----------------
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchhh-----------------
Confidence 458999999999999999988777899999999999999999999998 89999999998432
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEE-ECCCcccchhhhccCCccccCCCccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI-CNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~-cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
.+ ..++.||+|+ ||
T Consensus 84 --------------------------------------~~-~~~~~~D~IviaG-------------------------- 98 (230)
T 3lec_A 84 --------------------------------------AF-EEADNIDTITICG-------------------------- 98 (230)
T ss_dssp --------------------------------------GC-CGGGCCCEEEEEE--------------------------
T ss_pred --------------------------------------cc-ccccccCEEEEeC--------------------------
Confidence 11 1223689765 32
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~ 327 (384)
.|| ..+.+|+++....++.+++| .+........+.+.|.+.||..+..
T Consensus 99 -mGg--~lI~~IL~~~~~~l~~~~~l--Ilqp~~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 99 -MGG--RLIADILNNDIDKLQHVKTL--VLQPNNREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp -ECH--HHHHHHHHHTGGGGTTCCEE--EEEESSCHHHHHHHHHHTTEEEEEE
T ss_pred -Cch--HHHHHHHHHHHHHhCcCCEE--EEECCCChHHHHHHHHHCCCEEEEE
Confidence 112 46788888888888888875 3333567999999999999864443
No 29
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=1.9e-12 Score=123.50 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=90.7
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.+++.++..... +|+|+|+|+.|++.|++|++.|+ +.++++++.+|..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~----------------- 186 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRD----------------- 186 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTT-----------------
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHH-----------------
Confidence 468999999999999988877555 89999999999999999999998 88889999887532
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+. ..++||+|+||||+..
T Consensus 187 -----------------------------------~~-----~~~~fD~Vi~~~p~~~---------------------- 204 (278)
T 2frn_A 187 -----------------------------------FP-----GENIADRILMGYVVRT---------------------- 204 (278)
T ss_dssp -----------------------------------CC-----CCSCEEEEEECCCSSG----------------------
T ss_pred -----------------------------------hc-----ccCCccEEEECCchhH----------------------
Confidence 00 1468999999999542
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEE-Eec-----CCCCHHHHHHHHHHcCCe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVG-----RKSNLKFLISKLRKVGVT 323 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~-~vg-----k~~~l~~l~~~L~~~g~~ 323 (384)
..++.++.++++++|++.+ ..+ ....++.+.+.+++.|+.
T Consensus 205 --------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 205 --------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp --------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred --------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCe
Confidence 1122344456677776643 332 145688999999999985
No 30
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=3.6e-13 Score=122.27 Aligned_cols=93 Identities=11% Similarity=-0.015 Sum_probs=68.6
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
.+.|..+.+|++ ..+| |.+..+.+.+.+.+... ....+|||+|||+|.+++.++.+. ..+|+|+|+|+.
T Consensus 20 ~~~g~~l~~~~~-~~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~ 88 (202)
T 2fpo_A 20 QWRGRKLPVPDS-PGLR-PTTDRVRETLFNWLAPV--------IVDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRA 88 (202)
T ss_dssp GGTTCEEECCCC--------CHHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHH
T ss_pred EEcCcEecCCCC-CCCC-CCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHH
Confidence 467888988886 4566 77777777777766431 024589999999999988766553 249999999999
Q ss_pred HHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 151 al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
+++.|++|++.++ + ++++++++|.
T Consensus 89 ~l~~a~~~~~~~~-~-~~v~~~~~D~ 112 (202)
T 2fpo_A 89 VSQQLIKNLATLK-A-GNARVVNSNA 112 (202)
T ss_dssp HHHHHHHHHHHTT-C-CSEEEECSCH
T ss_pred HHHHHHHHHHHcC-C-CcEEEEECCH
Confidence 9999999999997 6 5799988763
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=1.6e-12 Score=114.97 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=50.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
...+|||+|||+|.++..|+.. +.+|+|+|+|+.+++.|++|++.++ + ++++++..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~~ 78 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELILDG 78 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEESC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCc
Confidence 3468999999999999988876 7899999999999999999999987 6 679988854
No 32
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=1.3e-12 Score=117.30 Aligned_cols=143 Identities=13% Similarity=0.041 Sum_probs=106.1
Q ss_pred CCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCC
Q 016734 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS 166 (384)
Q Consensus 87 rvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~ 166 (384)
+ |.++.++.++.+.+.... .....+|||+|||+|.++..++...++.+++|+|+++.+++.|++|+..++ +.
T Consensus 44 ~-~~~~~~~~~~~~~l~~~~------~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~ 115 (207)
T 1jsx_A 44 R-DPNEMLVRHILDSIVVAP------YLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-LE 115 (207)
T ss_dssp -----CHHHHHHHHHHHHGG------GCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CS
T ss_pred C-CHHHHHHHHHHhhhhhhh------hcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC
Confidence 5 778888888887765320 002458999999999999999988888999999999999999999999987 66
Q ss_pred CceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEE
Q 016734 167 ELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246 (384)
Q Consensus 167 ~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~ 246 (384)
+ +.++.+|..+ . . ..++||+|+
T Consensus 116 ~-v~~~~~d~~~----------------------------------------------------~----~-~~~~~D~i~ 137 (207)
T 1jsx_A 116 N-IEPVQSRVEE----------------------------------------------------F----P-SEPPFDGVI 137 (207)
T ss_dssp S-EEEEECCTTT----------------------------------------------------S----C-CCSCEEEEE
T ss_pred C-eEEEecchhh----------------------------------------------------C----C-ccCCcCEEE
Confidence 5 9998887432 0 0 135799999
Q ss_pred ECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEE
Q 016734 247 CNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (384)
Q Consensus 247 cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~ 326 (384)
||. + . .+..++++...+++++|++.++.| ..+.+++.++++ |+..++
T Consensus 138 ~~~-~------------------~-----------~~~~~l~~~~~~L~~gG~l~~~~~-~~~~~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 138 SRA-F------------------A-----------SLNDMVSWCHHLPGEQGRFYALKG-QMPEDEIALLPE--EYQVES 184 (207)
T ss_dssp CSC-S------------------S-----------SHHHHHHHHTTSEEEEEEEEEEES-SCCHHHHHTSCT--TEEEEE
T ss_pred Eec-c------------------C-----------CHHHHHHHHHHhcCCCcEEEEEeC-CCchHHHHHHhc--CCceee
Confidence 973 0 0 134667777788899999999988 567777777665 777666
Q ss_pred EE
Q 016734 327 TT 328 (384)
Q Consensus 327 ~~ 328 (384)
+.
T Consensus 185 ~~ 186 (207)
T 1jsx_A 185 VV 186 (207)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 33
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.44 E-value=3.3e-12 Score=111.85 Aligned_cols=147 Identities=16% Similarity=0.123 Sum_probs=109.6
Q ss_pred cCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCC
Q 016734 85 CPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH 164 (384)
Q Consensus 85 iPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~ 164 (384)
+|+ |.+.....++.+.+.. ....+|||+|||+|.++..++... .+++|+|+|+.+++.|++|++.++
T Consensus 13 ~~~-~~~~~~~~~~~~~~~~---------~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~- 79 (192)
T 1l3i_A 13 VPG-PTAMEVRCLIMCLAEP---------GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG- 79 (192)
T ss_dssp SCC-CCCHHHHHHHHHHHCC---------CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT-
T ss_pred CCC-CChHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC-
Confidence 465 5666677777776643 234689999999999988888665 799999999999999999999997
Q ss_pred CCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEE
Q 016734 165 ISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244 (384)
Q Consensus 165 l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~ 244 (384)
+.+++.++.+|..+ .+ ...+.||+
T Consensus 80 ~~~~~~~~~~d~~~-------------------------------------------------------~~-~~~~~~D~ 103 (192)
T 1l3i_A 80 LGDNVTLMEGDAPE-------------------------------------------------------AL-CKIPDIDI 103 (192)
T ss_dssp CCTTEEEEESCHHH-------------------------------------------------------HH-TTSCCEEE
T ss_pred CCcceEEEecCHHH-------------------------------------------------------hc-ccCCCCCE
Confidence 76679988876310 01 01247999
Q ss_pred EEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeE
Q 016734 245 CICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (384)
Q Consensus 245 i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~ 324 (384)
|+|++++.. +..++++..++++.+|++............+.+.+++.|+ .
T Consensus 104 v~~~~~~~~-----------------------------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~ 153 (192)
T 1l3i_A 104 AVVGGSGGE-----------------------------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-D 153 (192)
T ss_dssp EEESCCTTC-----------------------------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-C
T ss_pred EEECCchHH-----------------------------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-c
Confidence 999987510 2455666677888888887666656778899999999998 4
Q ss_pred EEEEEe
Q 016734 325 VKTTEF 330 (384)
Q Consensus 325 v~~~e~ 330 (384)
+.+.+.
T Consensus 154 ~~~~~~ 159 (192)
T 1l3i_A 154 VNITEL 159 (192)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 555443
No 34
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.44 E-value=1.1e-12 Score=117.94 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=87.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++|++.++ + +++++.+|..+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~---------------- 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSE---------------- 108 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGG----------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHH----------------
Confidence 3468999999999999888765 23489999999999999999999887 5 68998886321
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+ .++||+|+|||||+....
T Consensus 109 ----------------------------------------~---~~~~D~v~~~~p~~~~~~------------------ 127 (207)
T 1wy7_A 109 ----------------------------------------F---NSRVDIVIMNPPFGSQRK------------------ 127 (207)
T ss_dssp ----------------------------------------C---CCCCSEEEECCCCSSSST------------------
T ss_pred ----------------------------------------c---CCCCCEEEEcCCCccccC------------------
Confidence 1 247999999999976421
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~ 324 (384)
|....++. +...++ ++.|.+-+......+.+.+.+.+.|+..
T Consensus 128 --~~~~~~l~----~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 128 --HADRPFLL----KAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp --TTTHHHHH----HHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEE
T ss_pred --CchHHHHH----HHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 01233443 333343 6666555545667788888999999753
No 35
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.44 E-value=2.2e-12 Score=115.99 Aligned_cols=123 Identities=18% Similarity=0.119 Sum_probs=95.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.++..++. .+..+++|+|+++.+++.|++|+..++ +.+ +.++.+|..+
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~-v~~~~~d~~~----------------- 120 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNG-IYD-IALQKTSLLA----------------- 120 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTT-CCC-CEEEESSTTT-----------------
T ss_pred CCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcC-CCc-eEEEeccccc-----------------
Confidence 46899999999999888775 455699999999999999999999997 665 8998887431
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
. ..++||+|+||+|+..
T Consensus 121 --------------------------------------~---~~~~fD~i~~~~~~~~---------------------- 137 (205)
T 3grz_A 121 --------------------------------------D---VDGKFDLIVANILAEI---------------------- 137 (205)
T ss_dssp --------------------------------------T---CCSCEEEEEEESCHHH----------------------
T ss_pred --------------------------------------c---CCCCceEEEECCcHHH----------------------
Confidence 0 1367999999987621
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEE-ecCCCCHHHHHHHHHHcCCeEEEEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VGRKSNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~-vgk~~~l~~l~~~L~~~g~~~v~~~e 329 (384)
+..++++..++++.+|++... +. ..+...+.+.+++.|+..+.+.+
T Consensus 138 -------~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 138 -------LLDLIPQLDSHLNEDGQVIFSGID-YLQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp -------HHHHGGGSGGGEEEEEEEEEEEEE-GGGHHHHHHHHHHTTEEEEEEEE
T ss_pred -------HHHHHHHHHHhcCCCCEEEEEecC-cccHHHHHHHHHHcCCceEEeec
Confidence 345566666677777776543 44 56799999999999998766554
No 36
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.43 E-value=4.6e-13 Score=121.45 Aligned_cols=94 Identities=11% Similarity=-0.022 Sum_probs=65.4
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
.+.|..+.+|++. .++ |.+..+...+.+.+... ....+|||+|||+|.++..++.+. ..+|+|+|+|+.
T Consensus 19 ~~~g~~l~~~~~~-~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~ 87 (201)
T 2ift_A 19 LWRGRKLPVLNSE-GLR-PTGDRVKETLFNWLMPY--------IHQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKT 87 (201)
T ss_dssp TTTTCEEECC-----------CHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHH
T ss_pred eeCCcEecCCCCC-CcC-cCHHHHHHHHHHHHHHh--------cCCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHH
Confidence 4678888888763 445 55556666666655421 023589999999999988766543 358999999999
Q ss_pred HHHHHHHHHHHCCCCC-CceEEEEcCC
Q 016734 151 ALEWAEKNVKSNPHIS-ELIEIRKVDN 176 (384)
Q Consensus 151 al~~A~~Ni~~n~~l~-~~I~~~~~d~ 176 (384)
+++.|++|++.++ +. ++++++.+|.
T Consensus 88 ~l~~a~~~~~~~~-~~~~~v~~~~~d~ 113 (201)
T 2ift_A 88 VANQLKKNLQTLK-CSSEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHHHTT-CCTTTEEEECSCH
T ss_pred HHHHHHHHHHHhC-CCccceEEEECCH
Confidence 9999999999997 64 5799988773
No 37
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.42 E-value=2.7e-12 Score=128.38 Aligned_cols=161 Identities=7% Similarity=0.049 Sum_probs=106.0
Q ss_pred CCcEEEecCC-----CccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeC
Q 016734 73 HGLNWWIPDG-----QLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (384)
Q Consensus 73 fgl~~~vp~~-----~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDi 147 (384)
.|+.|.++.. .+.+ +....-.++.+++. ...+|||+|||+|.+++.++... ..+|+|+|+
T Consensus 179 ~g~~f~v~~~~~~~t~ff~---~~~~~~~~~~~~~~-----------~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~ 243 (385)
T 2b78_A 179 NGISYNVFLNDGLMTGIFL---DQRQVRNELINGSA-----------AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDL 243 (385)
T ss_dssp TTEEEEECSSSSSCCSSCG---GGHHHHHHHHHTTT-----------BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEES
T ss_pred CCEEEEEeccccccCCcCC---cHHHHHHHHHHHhc-----------CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEEC
Confidence 6888888776 4442 22222334444331 23589999999999998888642 238999999
Q ss_pred cHHHHHHHHHHHHHCCCCCC-ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCC
Q 016734 148 TDVALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSY 226 (384)
Q Consensus 148 d~~al~~A~~Ni~~n~~l~~-~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 226 (384)
|+.|++.|++|++.|+ +.+ +++++.+|..+
T Consensus 244 s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~------------------------------------------------ 274 (385)
T 2b78_A 244 AKRSRALSLAHFEANH-LDMANHQLVVMDVFD------------------------------------------------ 274 (385)
T ss_dssp CTTHHHHHHHHHHHTT-CCCTTEEEEESCHHH------------------------------------------------
T ss_pred CHHHHHHHHHHHHHcC-CCccceEEEECCHHH------------------------------------------------
Confidence 9999999999999998 775 79999887421
Q ss_pred CCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecC
Q 016734 227 HGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306 (384)
Q Consensus 227 ~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk 306 (384)
++......+++||+|+|||||+...... .. ..+..+..++..+..+++++|++.+....
T Consensus 275 ----~l~~~~~~~~~fD~Ii~DPP~~~~~~~~----------~~-------~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 275 ----YFKYARRHHLTYDIIIIDPPSFARNKKE----------VF-------SVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ----HHHHHHHTTCCEEEEEECCCCC-----C----------CC-------CHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----HHHHHHHhCCCccEEEECCCCCCCChhh----------HH-------HHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 1111111246899999999998532110 00 02566788889998888988887655542
Q ss_pred CC-CHHHHHHHHH
Q 016734 307 KS-NLKFLISKLR 318 (384)
Q Consensus 307 ~~-~l~~l~~~L~ 318 (384)
.. ..+.+.+.++
T Consensus 334 ~~~~~~~~~~~i~ 346 (385)
T 2b78_A 334 ANMTVSQFKKQIE 346 (385)
T ss_dssp TTSCHHHHHHHHH
T ss_pred CcCCHHHHHHHHH
Confidence 22 3444444443
No 38
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.42 E-value=1.4e-12 Score=122.99 Aligned_cols=146 Identities=14% Similarity=0.077 Sum_probs=109.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|++++.|+...++++|+|+|+++.+++.|++|++.++ +.+ |+++++|..+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l~~-v~~~~~d~~~---------------- 141 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG-LKG-ARALWGRAEV---------------- 141 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-CSS-EEEEECCHHH----------------
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-CCc-eEEEECcHHH----------------
Confidence 4568999999999999999988899999999999999999999999998 765 9999887421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+.......++||+|+|+= + .+
T Consensus 142 -------------------------------------~~~~~~~~~~fD~I~s~a----------------~---~~--- 162 (249)
T 3g89_A 142 -------------------------------------LAREAGHREAYARAVARA----------------V---AP--- 162 (249)
T ss_dssp -------------------------------------HTTSTTTTTCEEEEEEES----------------S---CC---
T ss_pred -------------------------------------hhcccccCCCceEEEECC----------------c---CC---
Confidence 000000146899999951 0 00
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCC--CCHHHHHHHHHHcCCeEEEEEEeeC-C-CeeEEEEEEecC
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEFVQ-G-QTCRWGLAWSFV 345 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~--~~l~~l~~~L~~~g~~~v~~~e~~q-G-~t~Rw~~AWsf~ 345 (384)
+..+++++..+++.+|.|.++.|.. ..+..+.+.+++.|+...++.++.. + ...|.++-+...
T Consensus 163 --------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 163 --------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKT 229 (249)
T ss_dssp --------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred --------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeC
Confidence 3466777888899999998888842 2355667788889998777776633 3 247877777764
No 39
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.42 E-value=3.1e-12 Score=120.42 Aligned_cols=139 Identities=14% Similarity=0.067 Sum_probs=103.1
Q ss_pred CcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 88 vP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
.|.+..+++++...+. ...+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++|+..|+ +.
T Consensus 104 ~~tt~~~~~~l~~~~~-----------~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~-~~- 168 (254)
T 2nxc_A 104 HETTRLALKALARHLR-----------PGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNG-VR- 168 (254)
T ss_dssp SHHHHHHHHHHHHHCC-----------TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTT-CC-
T ss_pred CHHHHHHHHHHHHhcC-----------CCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcC-Cc-
Confidence 3556677777766532 2458999999999998887764 3499999999999999999999997 54
Q ss_pred ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEE
Q 016734 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247 (384)
Q Consensus 168 ~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~c 247 (384)
+.++.+|.. ..+ ..++||+|+|
T Consensus 169 -v~~~~~d~~-------------------------------------------------------~~~--~~~~fD~Vv~ 190 (254)
T 2nxc_A 169 -PRFLEGSLE-------------------------------------------------------AAL--PFGPFDLLVA 190 (254)
T ss_dssp -CEEEESCHH-------------------------------------------------------HHG--GGCCEEEEEE
T ss_pred -EEEEECChh-------------------------------------------------------hcC--cCCCCCEEEE
Confidence 788776531 111 2357999999
Q ss_pred CCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEE-EecCCCCHHHHHHHHHHcCCeEEE
Q 016734 248 NPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS-MVGRKSNLKFLISKLRKVGVTIVK 326 (384)
Q Consensus 248 NPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~-~vgk~~~l~~l~~~L~~~g~~~v~ 326 (384)
|+++. .+..++.+..++++++|++.. .+. ..+...+.+.+++.|+..+.
T Consensus 191 n~~~~-----------------------------~~~~~l~~~~~~LkpgG~lils~~~-~~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 191 NLYAE-----------------------------LHAALAPRYREALVPGGRALLTGIL-KDRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp ECCHH-----------------------------HHHHHHHHHHHHEEEEEEEEEEEEE-GGGHHHHHHHHHHTTCEEEE
T ss_pred CCcHH-----------------------------HHHHHHHHHHHHcCCCCEEEEEeec-cCCHHHHHHHHHHCCCEEEE
Confidence 98541 134566777777788887654 333 56899999999999998777
Q ss_pred EEE
Q 016734 327 TTE 329 (384)
Q Consensus 327 ~~e 329 (384)
+.+
T Consensus 241 ~~~ 243 (254)
T 2nxc_A 241 EAA 243 (254)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
No 40
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=1.2e-12 Score=119.80 Aligned_cols=161 Identities=10% Similarity=0.139 Sum_probs=110.3
Q ss_pred CCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHH
Q 016734 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 81 ~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~ 160 (384)
+.+++|. |++ ....|.. ++. ....+|||||||+|.+...|+...++++|+|+|+++.+++.|++|++
T Consensus 17 ~~~~~~~-~~~-~~~~~~~-~f~----------~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~ 83 (213)
T 2fca_A 17 ADIAISN-PAD-YKGKWNT-VFG----------NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK 83 (213)
T ss_dssp TTTBCSC-GGG-GTTCHHH-HHT----------SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH
T ss_pred ccEEecC-ccc-cCCCHHH-HcC----------CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH
Confidence 4566776 654 2234543 332 13458999999999999999998899999999999999999999999
Q ss_pred HCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCC
Q 016734 161 SNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240 (384)
Q Consensus 161 ~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~ 240 (384)
.++ +. +|.++.+|..+ +.... ..+
T Consensus 84 ~~~-~~-nv~~~~~d~~~-----------------------------------------------------l~~~~-~~~ 107 (213)
T 2fca_A 84 DSE-AQ-NVKLLNIDADT-----------------------------------------------------LTDVF-EPG 107 (213)
T ss_dssp HSC-CS-SEEEECCCGGG-----------------------------------------------------HHHHC-CTT
T ss_pred HcC-CC-CEEEEeCCHHH-----------------------------------------------------HHhhc-CcC
Confidence 987 64 59998877421 00001 245
Q ss_pred cEEEEEECCC--cccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHH
Q 016734 241 QFDFCICNPP--FFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318 (384)
Q Consensus 241 ~fD~i~cNPP--y~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~ 318 (384)
.||.|++|.| +....... .+ .+...++++..++++.+|++.+..........+.+.+.
T Consensus 108 ~~d~v~~~~~~p~~~~~~~~------------~r--------l~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 167 (213)
T 2fca_A 108 EVKRVYLNFSDPWPKKRHEK------------RR--------LTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFS 167 (213)
T ss_dssp SCCEEEEESCCCCCSGGGGG------------GS--------TTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred CcCEEEEECCCCCcCccccc------------cc--------cCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 7999988854 32211100 00 01345667777888899998777654555778888999
Q ss_pred HcCCeEEEEEEe
Q 016734 319 KVGVTIVKTTEF 330 (384)
Q Consensus 319 ~~g~~~v~~~e~ 330 (384)
+.|+....+..+
T Consensus 168 ~~g~~~~~~~~d 179 (213)
T 2fca_A 168 EYGLLLTYVSLD 179 (213)
T ss_dssp HHTCEEEEEESS
T ss_pred HCCCcccccccc
Confidence 999876655543
No 41
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=9.7e-12 Score=108.26 Aligned_cols=137 Identities=16% Similarity=0.080 Sum_probs=100.3
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|.+.....++.+.+.. ....+|||+|||+|.++..++. ++.+++|+|+++.+++.|++|++.++ + ++
T Consensus 18 ~~~~~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~ 84 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNL---------NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN-I-KN 84 (183)
T ss_dssp CCCHHHHHHHHHHHCC---------CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT-C-CS
T ss_pred cCHHHHHHHHHHHcCC---------CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC-C-Cc
Confidence 4456677777777743 2346899999999999888876 78899999999999999999999997 6 46
Q ss_pred eEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEEC
Q 016734 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248 (384)
Q Consensus 169 I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cN 248 (384)
+.++.+|.. ..+ ..++||+|+||
T Consensus 85 ~~~~~~d~~-------------------------------------------------------~~~--~~~~~D~i~~~ 107 (183)
T 2yxd_A 85 CQIIKGRAE-------------------------------------------------------DVL--DKLEFNKAFIG 107 (183)
T ss_dssp EEEEESCHH-------------------------------------------------------HHG--GGCCCSEEEEC
T ss_pred EEEEECCcc-------------------------------------------------------ccc--cCCCCcEEEEC
Confidence 898887632 111 13579999999
Q ss_pred CCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEE
Q 016734 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328 (384)
Q Consensus 249 PPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~ 328 (384)
+| .. ...++++..++ .+|++........++..+.+.|++.|+. ++.+
T Consensus 108 ~~--~~----------------------------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~-~~~~ 154 (183)
T 2yxd_A 108 GT--KN----------------------------IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYN-VDAV 154 (183)
T ss_dssp SC--SC----------------------------HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCE-EEEE
T ss_pred Cc--cc----------------------------HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCe-EEEE
Confidence 98 10 22334444445 6676655554577889999999999963 4544
No 42
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.41 E-value=2.5e-12 Score=118.45 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=102.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++|++.++ +.+++.++.+|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~----------------- 138 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLL----------------- 138 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHH-----------------
Confidence 468999999999999888865 5899999999999999999999997 77789999987421
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+ . ..++||+|+|||||......... + .....++.
T Consensus 139 -----------------------------------~----~-~~~~~D~v~~~~~~~~~~~~~~~-----~-~~~~~~L~ 172 (241)
T 3gdh_A 139 -----------------------------------L----A-SFLKADVVFLSPPWGGPDYATAE-----T-FDIRTMMS 172 (241)
T ss_dssp -----------------------------------H----G-GGCCCSEEEECCCCSSGGGGGSS-----S-BCTTTSCS
T ss_pred -----------------------------------h----c-ccCCCCEEEECCCcCCcchhhhH-----H-HHHHhhcC
Confidence 0 0 24689999999999875432211 1 12334566
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~ 340 (384)
+||-+ ++ .....+.....+ .+.+...++.+..+|...|...+.. ....|......+
T Consensus 173 pgG~~-i~----~~~~~~~~~~~~---~lp~~~~~~~~~~~l~~~g~~~i~~-~~~~~~~k~~~~ 228 (241)
T 3gdh_A 173 PDGFE-IF----RLSKKITNNIVY---FLPRNADIDQVASLAGPGGQVEIEQ-NFLNNKLKTITA 228 (241)
T ss_dssp SCHHH-HH----HHHHHHCSCEEE---EEETTBCHHHHHHTTCTTCCEEEEE-EEETTEEEEEEE
T ss_pred Cccee-HH----HHHHhhCCceEE---ECCCCCCHHHHHHHhccCCCEEEEe-hhhcCccceEEE
Confidence 77752 22 223334333333 3455678889988888877654433 345666555443
No 43
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.40 E-value=9.4e-12 Score=115.36 Aligned_cols=170 Identities=11% Similarity=0.069 Sum_probs=115.6
Q ss_pred ccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCC
Q 016734 84 LCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (384)
Q Consensus 84 LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~ 163 (384)
..|+ +..+.+..++.+.+..... . .-....+|||||||+|.++..++...++.+|+|+|+|+.+++.|++|++.++
T Consensus 43 ~~~~-~~~~~~~~~~~d~l~~~~~--~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 118 (240)
T 1xdz_A 43 TSIT-EKKEVYLKHFYDSITAAFY--V-DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ 118 (240)
T ss_dssp CSCC-SHHHHHHHTHHHHHGGGGT--S-CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred cccC-CHHHHHHHHHHHHHhHHHh--c-ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 3455 6667777777766532110 0 0013468999999999999889887788999999999999999999999987
Q ss_pred CCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEE
Q 016734 164 HISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243 (384)
Q Consensus 164 ~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD 243 (384)
+. +|+++++|..+ +... ....++||
T Consensus 119 -~~-~v~~~~~d~~~----------------------------------------------------~~~~-~~~~~~fD 143 (240)
T 1xdz_A 119 -LE-NTTFCHDRAET----------------------------------------------------FGQR-KDVRESYD 143 (240)
T ss_dssp -CS-SEEEEESCHHH----------------------------------------------------HTTC-TTTTTCEE
T ss_pred -CC-CEEEEeccHHH----------------------------------------------------hccc-ccccCCcc
Confidence 65 49999887421 0000 00146899
Q ss_pred EEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCC--CHHHHHHHHHHcC
Q 016734 244 FCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS--NLKFLISKLRKVG 321 (384)
Q Consensus 244 ~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~--~l~~l~~~L~~~g 321 (384)
+|+|+. + . -...+++++..+++.+|++.++.|... .+..+.+.+++.|
T Consensus 144 ~V~~~~--~-----------------~-----------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 144 IVTARA--V-----------------A-----------RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLG 193 (240)
T ss_dssp EEEEEC--C-----------------S-----------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTT
T ss_pred EEEEec--c-----------------C-----------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcC
Confidence 999953 0 0 045667777788899999887777321 2456777888999
Q ss_pred CeEEEEEEeeCC--CeeEEEEEE
Q 016734 322 VTIVKTTEFVQG--QTCRWGLAW 342 (384)
Q Consensus 322 ~~~v~~~e~~qG--~t~Rw~~AW 342 (384)
+..+.+..+... ...|.++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~l~~~ 216 (240)
T 1xdz_A 194 GELENIHSFKLPIEESDRNIMVI 216 (240)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEE
T ss_pred CeEeEEEEEecCCCCCceEEEEE
Confidence 977776655433 234544444
No 44
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=7e-12 Score=123.05 Aligned_cols=133 Identities=18% Similarity=0.126 Sum_probs=95.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.+++. +. ...+|+|+|+|+.|++.|++|++.|+ +.+++.++.+|..+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~----------------- 254 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVRE----------------- 254 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGG-----------------
T ss_pred CCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHH-----------------
Confidence 45899999999999888 65 47799999999999999999999998 77789999887421
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+ . ++||+|++|||++..
T Consensus 255 -----------------------------------~----~---~~fD~Vi~dpP~~~~--------------------- 271 (336)
T 2yx1_A 255 -----------------------------------V----D---VKGNRVIMNLPKFAH--------------------- 271 (336)
T ss_dssp -----------------------------------C----C---CCEEEEEECCTTTGG---------------------
T ss_pred -----------------------------------h----c---CCCcEEEECCcHhHH---------------------
Confidence 0 1 579999999998731
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEE-EEecCCCCHHHHHHHHHHc-CCe--EEEEEEeeCCCeeEEEEEEecC
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYT-SMVGRKSNLKFLISKLRKV-GVT--IVKTTEFVQGQTCRWGLAWSFV 345 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t-~~vgk~~~l~~l~~~L~~~-g~~--~v~~~e~~qG~t~Rw~~AWsf~ 345 (384)
.+++.+..+++.+|++. +..... ...+.+.+++. ++. .++..++...+ .|.+.|.|.
T Consensus 272 ---------~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~~~v~~~~p~--~~~~~~~~~ 332 (336)
T 2yx1_A 272 ---------KFIDKALDIVEEGGVIHYYTIGKD--FDKAIKLFEKKCDCEVLEKRIVKSYAPR--EYILALDFK 332 (336)
T ss_dssp ---------GGHHHHHHHEEEEEEEEEEEEESS--SHHHHHHHHHHSEEEEEEEEEEEEEETT--EEEEEEEEE
T ss_pred ---------HHHHHHHHHcCCCCEEEEEEeecC--chHHHHHHHHhcCCcEEEEEEEeccCCC--CCEEEEEEE
Confidence 23344555666777653 344433 67777788776 554 34445555444 344566654
No 45
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.39 E-value=4.2e-12 Score=126.34 Aligned_cols=183 Identities=16% Similarity=0.070 Sum_probs=109.6
Q ss_pred hhccCCcEEEecCCC---------ccCCCcCHHHHHHHHHHHhccC-----CCCCCCCCCCCCeEEEECCcccHHHHHHH
Q 016734 69 LLHDHGLNWWIPDGQ---------LCPTVPNRSNYIHWIEDLLSSN-----IIPTTSRNGDKVKGFDIGTGANCIYPLLG 134 (384)
Q Consensus 69 L~~~fgl~~~vp~~~---------LiPrvP~r~~yi~~i~dll~~~-----~~~~~~~~~~~~~vLDIGtGsG~I~~~La 134 (384)
.++||+..+....+. ++|+ +.++.+......++..- ..+.. ......+|||||||+|.++..|+
T Consensus 25 v~~~Y~~~~~~~~~~~~~~~~~~~~~p~-~~~e~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~VLDlGcG~G~~~~~la 102 (383)
T 4fsd_A 25 VADYYGKTLQSSADLKTSACKLAAAVPE-SHRKILADIADEVLEKFYGCGSTLPAD-GSLEGATVLDLGCGTGRDVYLAS 102 (383)
T ss_dssp -------------------------CCH-HHHHHHHTSCHHHHHHCCSCCCCCSCG-GGGTTCEEEEESCTTSHHHHHHH
T ss_pred HHHHHHHHhcchhhcccccccCCCCCCH-HHHHHHHHhhHHHHHHhcCCCCccccc-cCCCCCEEEEecCccCHHHHHHH
Confidence 567777765554433 7777 77776655333333210 01110 01245689999999999999998
Q ss_pred hhc-cCCEEEEEeCcHHHHHHHHHHHHHC-----C-CCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcC
Q 016734 135 ASL-LGWSFVGSDMTDVALEWAEKNVKSN-----P-HISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207 (384)
Q Consensus 135 ~~~-~~~~v~gvDid~~al~~A~~Ni~~n-----~-~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (384)
... ++.+|+|+|+++.+++.|++|++.+ + ....++.++.+|..+..
T Consensus 103 ~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~--------------------------- 155 (383)
T 4fsd_A 103 KLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA--------------------------- 155 (383)
T ss_dssp HHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG---------------------------
T ss_pred HHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh---------------------------
Confidence 876 7889999999999999999998765 2 12257999998854200
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHH
Q 016734 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRII 287 (384)
Q Consensus 208 ~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii 287 (384)
. . .-..+ .+++||+|+||..+....+ ...++
T Consensus 156 ----------~-~----------~~~~~--~~~~fD~V~~~~~l~~~~d--------------------------~~~~l 186 (383)
T 4fsd_A 156 ----------T-A----------EPEGV--PDSSVDIVISNCVCNLSTN--------------------------KLALF 186 (383)
T ss_dssp ----------G-C----------BSCCC--CTTCEEEEEEESCGGGCSC--------------------------HHHHH
T ss_pred ----------h-c----------ccCCC--CCCCEEEEEEccchhcCCC--------------------------HHHHH
Confidence 0 0 00011 3578999999976653210 23556
Q ss_pred HHHHHhhccCeEEEEE-ecC---------------------CCCHHHHHHHHHHcCCeEEEEEE
Q 016734 288 EDSVALKQTFRWYTSM-VGR---------------------KSNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 288 ~eS~~l~~~~~w~t~~-vgk---------------------~~~l~~l~~~L~~~g~~~v~~~e 329 (384)
++..++++.+|++.+. +.. .-..+++.++|++.||..+++.+
T Consensus 187 ~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 187 KEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 6677778888876543 221 13458999999999998887765
No 46
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.39 E-value=3.6e-12 Score=118.44 Aligned_cols=128 Identities=17% Similarity=0.182 Sum_probs=102.5
Q ss_pred CCCeEEEECCcccHHHHHHHhh-ccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~-~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|.++..++.. .++.+++|+|+++.+++.|++|++.++ +.++++++.+|..+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~--------------- 156 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYE--------------- 156 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGG---------------
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhh---------------
Confidence 3568999999999999999887 568899999999999999999999997 78789998877321
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
.+ .+++||+|+||||..
T Consensus 157 ----------------------------------------~~--~~~~~D~v~~~~~~~--------------------- 173 (255)
T 3mb5_A 157 ----------------------------------------GI--EEENVDHVILDLPQP--------------------- 173 (255)
T ss_dssp ----------------------------------------CC--CCCSEEEEEECSSCG---------------------
T ss_pred ----------------------------------------cc--CCCCcCEEEECCCCH---------------------
Confidence 11 246799999998732
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcC--CeEEEEEEee
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG--VTIVKTTEFV 331 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g--~~~v~~~e~~ 331 (384)
..++++..++++.+|++.+......++..+.+.|++.| +..+++.+..
T Consensus 174 ----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 174 ----------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp ----------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred ----------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 11234555677888888777665678899999999999 9888888765
No 47
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.38 E-value=4.7e-12 Score=123.88 Aligned_cols=97 Identities=9% Similarity=-0.003 Sum_probs=74.0
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
.+||..+.+...+++|+ ++...|-+.+..+..... ..+.+|||||||+|+++..+++..+..+++++|+|+.
T Consensus 80 ~~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~ 151 (321)
T 2pt6_A 80 TTYGKVLVLDGVIQLTE-KDEFAYHEMMTHVPMTVS-------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET 151 (321)
T ss_dssp SSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHHHS-------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH
T ss_pred CCCcEEEEECCEeeeCc-ccchHHHHHHHHHHHhcC-------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH
Confidence 57899999999999999 875555444443211110 1346899999999999988887666789999999999
Q ss_pred HHHHHHHHHHH--CCCC-CCceEEEEcCC
Q 016734 151 ALEWAEKNVKS--NPHI-SELIEIRKVDN 176 (384)
Q Consensus 151 al~~A~~Ni~~--n~~l-~~~I~~~~~d~ 176 (384)
+++.|++|+.. ++ + ..+++++.+|.
T Consensus 152 ~l~~ar~~~~~~~~~-~~~~~v~~~~~D~ 179 (321)
T 2pt6_A 152 VIEVSKIYFKNISCG-YEDKRVNVFIEDA 179 (321)
T ss_dssp HHHHHHHHCTTTSGG-GGSTTEEEEESCH
T ss_pred HHHHHHHHHHhhccc-cCCCcEEEEEccH
Confidence 99999999875 22 3 35799988873
No 48
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.38 E-value=1.3e-11 Score=115.46 Aligned_cols=79 Identities=13% Similarity=0.095 Sum_probs=63.1
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|.....+.++.+++... ....+|||||||+|.++..++.. ++.+|+|+|+++.+++.|+++++.++ +.++
T Consensus 28 ~~~~~~~~~~l~~l~~~--------~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~ 97 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNL--------TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG-LQNR 97 (267)
T ss_dssp SCCHHHHHHHHTTCCCC--------CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT-CTTT
T ss_pred CCCHHHHHHHHHhcccC--------CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC-CCcC
Confidence 44455555555555411 24569999999999999888876 77799999999999999999999998 8888
Q ss_pred eEEEEcCCC
Q 016734 169 IEIRKVDNS 177 (384)
Q Consensus 169 I~~~~~d~~ 177 (384)
++++.+|..
T Consensus 98 v~~~~~d~~ 106 (267)
T 3kkz_A 98 VTGIVGSMD 106 (267)
T ss_dssp EEEEECCTT
T ss_pred cEEEEcChh
Confidence 999998853
No 49
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=1.9e-11 Score=113.03 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=62.7
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|.....+.++.+++... ....+|||||||+|.++..++...+. +++|+|+++.+++.|++++..++ +.++
T Consensus 28 ~~~~~~~~~~l~~l~~~--------~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~ 97 (257)
T 3f4k_A 28 PGSPEATRKAVSFINEL--------TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN-CADR 97 (257)
T ss_dssp SCCHHHHHHHHTTSCCC--------CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT-CTTT
T ss_pred CCCHHHHHHHHHHHhcC--------CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC-CCCc
Confidence 44455566666555321 23458999999999999999887765 99999999999999999999998 8888
Q ss_pred eEEEEcCC
Q 016734 169 IEIRKVDN 176 (384)
Q Consensus 169 I~~~~~d~ 176 (384)
+.++.+|.
T Consensus 98 ~~~~~~d~ 105 (257)
T 3f4k_A 98 VKGITGSM 105 (257)
T ss_dssp EEEEECCT
T ss_pred eEEEECCh
Confidence 99999885
No 50
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.37 E-value=1.5e-11 Score=113.66 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=64.1
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|....++.++.+.+.. ....+|||||||+|.++..++... +.+++|+|+++.+++.|+++++.++ +.++
T Consensus 19 ~~~~~~~~~l~~~~~~---------~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~ 87 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRM---------KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG-VSER 87 (256)
T ss_dssp SCCHHHHHHHHHHTCC---------CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT-CTTT
T ss_pred CCCHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC-CCcc
Confidence 5566677777776642 234689999999999998888766 7799999999999999999999987 7778
Q ss_pred eEEEEcCC
Q 016734 169 IEIRKVDN 176 (384)
Q Consensus 169 I~~~~~d~ 176 (384)
+.++.+|.
T Consensus 88 v~~~~~d~ 95 (256)
T 1nkv_A 88 VHFIHNDA 95 (256)
T ss_dssp EEEEESCC
T ss_pred eEEEECCh
Confidence 99998874
No 51
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.36 E-value=9.6e-12 Score=124.67 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=62.1
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccC-----------------------------
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~----------------------------- 139 (384)
|-++++...+..+... .....+||+|||||.+.+.++....+
T Consensus 178 pl~e~lAa~ll~~~~~---------~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a 248 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPW---------KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDA 248 (385)
T ss_dssp CCCHHHHHHHHHTSCC---------CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC---------CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHH
Confidence 6778877666654432 23468999999999998877654322
Q ss_pred ---------CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 140 ---------~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+|+|+|+|+.|++.|++|++.++ +.+.|++.++|.
T Consensus 249 ~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~g-l~~~i~~~~~D~ 293 (385)
T 3ldu_A 249 FNKIDNESKFKIYGYDIDEESIDIARENAEIAG-VDEYIEFNVGDA 293 (385)
T ss_dssp HHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCG
T ss_pred HHHhhccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 579999999999999999999998 888899999874
No 52
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=1.2e-11 Score=117.68 Aligned_cols=89 Identities=11% Similarity=-0.009 Sum_probs=68.9
Q ss_pred cCCcEEEecCCC--ccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 72 DHGLNWWIPDGQ--LCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 72 ~fgl~~~vp~~~--LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..|+.|.++++. +.|+ ..++... ++.. . ....+|||+|||+|.+++.++...+..+|+|+|+++
T Consensus 88 e~g~~f~~~~~~~f~~~~-~~~e~~~-----~~~~--~------~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~ 153 (272)
T 3a27_A 88 EYGCLFKLDVAKIMWSQG-NIEERKR-----MAFI--S------NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP 153 (272)
T ss_dssp ETTEEEEEETTTSCCCGG-GHHHHHH-----HHTS--C------CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH
T ss_pred ECCEEEEEechhEEECCC-chHHHHH-----HHHh--c------CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH
Confidence 378899998887 6777 3333332 1211 0 134589999999999999999887777999999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.|++.|++|++.|+ +. ++.++.+|.
T Consensus 154 ~av~~a~~n~~~n~-l~-~~~~~~~d~ 178 (272)
T 3a27_A 154 TAYHYLCENIKLNK-LN-NVIPILADN 178 (272)
T ss_dssp HHHHHHHHHHHHTT-CS-SEEEEESCG
T ss_pred HHHHHHHHHHHHcC-CC-CEEEEECCh
Confidence 99999999999998 65 478888874
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.36 E-value=6.9e-12 Score=120.32 Aligned_cols=61 Identities=18% Similarity=0.161 Sum_probs=54.0
Q ss_pred CCCeEEEECCcccHHHHHHH-hhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La-~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++ ...++.+|+|+|+|+.+++.|++|+..++ +.++++++.+|.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDA 179 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCG
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECch
Confidence 35689999999999988875 45678999999999999999999999987 788899999874
No 54
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.35 E-value=3.5e-11 Score=109.90 Aligned_cols=77 Identities=19% Similarity=0.257 Sum_probs=60.8
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCc
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~ 168 (384)
|....+...+.+++.. ...+.+|||||||+|.+...++...++.+++|+|+|+.+++.|++++..++ +
T Consensus 26 ~~~~~~~~~~~~~~~~--------~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~ 93 (234)
T 3dtn_A 26 PCFDDFYGVSVSIASV--------DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----K 93 (234)
T ss_dssp TTHHHHHHHHHHTCCC--------SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----T
T ss_pred cCHHHHHHHHHHHhhc--------CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----C
Confidence 4445555556665542 124579999999999999999988889999999999999999999986553 6
Q ss_pred eEEEEcCCC
Q 016734 169 IEIRKVDNS 177 (384)
Q Consensus 169 I~~~~~d~~ 177 (384)
+.++.+|..
T Consensus 94 ~~~~~~d~~ 102 (234)
T 3dtn_A 94 VKYIEADYS 102 (234)
T ss_dssp EEEEESCTT
T ss_pred EEEEeCchh
Confidence 999988753
No 55
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.35 E-value=1.7e-11 Score=112.82 Aligned_cols=166 Identities=13% Similarity=0.115 Sum_probs=114.2
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCC-------CCCCCCCCeEEEECCcccHHHHHHHhhccCCEEE
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPT-------TSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFV 143 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~-------~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~ 143 (384)
..||-.+ +.+++|+ |+.+.+.+.+.........+. ...-....+|||+|||+|.++..++.. +.+++
T Consensus 44 ~~~G~~~---~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~ 117 (248)
T 2yvl_A 44 KPEGVKI---NGFEVYR-PTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVW 117 (248)
T ss_dssp CCTTEEE---TTEEEEC-CCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEE
T ss_pred CCCCCEE---EEEEEeC-CCHHHHHHhcCcCCCCcccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEE
Confidence 4566554 7889999 988777643221100000000 000123468999999999999888876 78999
Q ss_pred EEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCC
Q 016734 144 GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQ 223 (384)
Q Consensus 144 gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 223 (384)
++|+++.+++.|++|++.++ +.+++.++.+|..+
T Consensus 118 ~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~--------------------------------------------- 151 (248)
T 2yvl_A 118 TFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKD--------------------------------------------- 151 (248)
T ss_dssp EECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTT---------------------------------------------
T ss_pred EEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhh---------------------------------------------
Confidence 99999999999999999987 76789888776431
Q ss_pred CCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEE
Q 016734 224 SSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303 (384)
Q Consensus 224 ~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~ 303 (384)
.+ . .++.||+|++|||- | ..++++..++++.+|++...
T Consensus 152 -------~~---~-~~~~~D~v~~~~~~----------~---------------------~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 152 -------AE---V-PEGIFHAAFVDVRE----------P---------------------WHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp -------SC---C-CTTCBSEEEECSSC----------G---------------------GGGHHHHHHHBCTTCEEEEE
T ss_pred -------cc---c-CCCcccEEEECCcC----------H---------------------HHHHHHHHHHcCCCCEEEEE
Confidence 00 0 13579999999871 1 01134445677888988888
Q ss_pred ecCCCCHHHHHHHHHHcCCeEEEEEEee
Q 016734 304 VGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (384)
Q Consensus 304 vgk~~~l~~l~~~L~~~g~~~v~~~e~~ 331 (384)
.....++.++.+.|++. +..+++.+..
T Consensus 190 ~~~~~~~~~~~~~l~~~-f~~~~~~~~~ 216 (248)
T 2yvl_A 190 LPTANQVIKLLESIENY-FGNLEVVEIL 216 (248)
T ss_dssp ESSHHHHHHHHHHSTTT-EEEEEEEEEE
T ss_pred eCCHHHHHHHHHHHHhh-CCcceEEEee
Confidence 87667888888888877 7777776654
No 56
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=2.3e-11 Score=121.70 Aligned_cols=137 Identities=17% Similarity=0.085 Sum_probs=93.0
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCC-CCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI-SELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l-~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
..+|||+|||+|.+++.++... ..+|+|+|+|+.+++.|++|++.|+ + .++++++.+|..+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~---------------- 282 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFK---------------- 282 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHH----------------
T ss_pred CCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHH----------------
Confidence 3589999999999998888653 4599999999999999999999998 7 6689999887421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
++......+++||+|+|||||+...... ...
T Consensus 283 ------------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~------~~~------- 313 (396)
T 3c0k_A 283 ------------------------------------LLRTYRDRGEKFDVIVMDPPKFVENKSQ------LMG------- 313 (396)
T ss_dssp ------------------------------------HHHHHHHTTCCEEEEEECCSSTTTCSSS------SSC-------
T ss_pred ------------------------------------HHHHHHhcCCCCCEEEECCCCCCCChhH------HHH-------
Confidence 1111111246899999999998643211 000
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEec-CCCC----HHHHHHHHHHcCCe
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVG-RKSN----LKFLISKLRKVGVT 323 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg-k~~~----l~~l~~~L~~~g~~ 323 (384)
....+..++.++..+++.+|++.+... ..-. .+.+.+.+.+.|..
T Consensus 314 ----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 363 (396)
T 3c0k_A 314 ----ACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRD 363 (396)
T ss_dssp ----CCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred ----HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCe
Confidence 122356677777788888887654333 1222 22333466677754
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.35 E-value=2e-11 Score=106.40 Aligned_cols=123 Identities=13% Similarity=0.006 Sum_probs=91.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||+|||+|.++..++...++.+++|+|+++.+++.|++|++.++ +.+++ ++.+|..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~---------------- 86 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPR---------------- 86 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTG----------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHh----------------
Confidence 3468999999999999999988888999999999999999999999987 77678 77766321
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
.+....++||+|+|+.++..
T Consensus 87 ---------------------------------------~~~~~~~~~D~i~~~~~~~~--------------------- 106 (178)
T 3hm2_A 87 ---------------------------------------AFDDVPDNPDVIFIGGGLTA--------------------- 106 (178)
T ss_dssp ---------------------------------------GGGGCCSCCSEEEECC-TTC---------------------
T ss_pred ---------------------------------------hhhccCCCCCEEEECCcccH---------------------
Confidence 01111268999999987632
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~ 324 (384)
..++++..++++++|++........+...+.+.+++.|+..
T Consensus 107 ---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 107 ---------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTI 147 (178)
T ss_dssp ---------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEE
T ss_pred ---------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCee
Confidence 22334455677778877654444567788888999998653
No 58
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=8.9e-11 Score=106.76 Aligned_cols=120 Identities=11% Similarity=-0.003 Sum_probs=93.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|.++..++.. +.+|+|+|+++++++.|++|++.++ +.++++++.+|..+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~---------------- 115 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQGTAPA---------------- 115 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCTTG----------------
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeCchhh----------------
Confidence 3468999999999999888876 7899999999999999999999998 77689999987431
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
.+ ...+.||+|++++..
T Consensus 116 ------------------------------------~~----~~~~~~D~v~~~~~~----------------------- 132 (204)
T 3njr_A 116 ------------------------------------AL----ADLPLPEAVFIGGGG----------------------- 132 (204)
T ss_dssp ------------------------------------GG----TTSCCCSEEEECSCC-----------------------
T ss_pred ------------------------------------hc----ccCCCCCEEEECCcc-----------------------
Confidence 01 012469999988621
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~ 324 (384)
. .. ++++..++++++|++........++..+.+.|++.|+..
T Consensus 133 ----~---~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 133 ----S---QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQL 174 (204)
T ss_dssp ----C---HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEE
T ss_pred ----c---HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcE
Confidence 0 22 556666778888887666655778999999999999653
No 59
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.34 E-value=9e-12 Score=122.15 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=94.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccC-----CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLG-----WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~-----~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~ 189 (384)
...+|||+|||+|.+...++...+. .+++|+|+|+.+++.|+.|+..++ + .+.++.+|...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~----------- 195 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLA----------- 195 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTS-----------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCC-----------
Confidence 3468999999999999888877654 789999999999999999999887 5 47888887431
Q ss_pred CccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCc--ccchhhh-ccCCcccc
Q 016734 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF--FESMEEA-GLNPKTSC 266 (384)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy--~~s~~~~-~~~p~~~~ 266 (384)
.. ..++||+||||||| ++..+.. ..++.
T Consensus 196 --------------------------------------------~~--~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~--- 226 (344)
T 2f8l_A 196 --------------------------------------------NL--LVDPVDVVISDLPVGYYPDDENAKTFELC--- 226 (344)
T ss_dssp --------------------------------------------CC--CCCCEEEEEEECCCSEESCHHHHTTSTTC---
T ss_pred --------------------------------------------cc--ccCCccEEEECCCCCCcCchhhhhhcccc---
Confidence 00 13679999999996 3322211 11111
Q ss_pred CCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEec----CCCCHHHHHHHHHHcCC
Q 016734 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG----RKSNLKFLISKLRKVGV 322 (384)
Q Consensus 267 ~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg----k~~~l~~l~~~L~~~g~ 322 (384)
...|.......++..+..+++.+|++.+.+. ...+...+.+.|.+.+.
T Consensus 227 --------~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 227 --------REEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp --------CSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred --------CCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 1112212223345566677788888877761 24567889998888775
No 60
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.33 E-value=1.5e-11 Score=120.62 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=104.6
Q ss_pred CcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHH
Q 016734 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (384)
Q Consensus 74 gl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~ 153 (384)
++.+...++++.+.-.+. ...++.+.+.. ....+|||+|||+|.++..++...+.++|+|+|+|+.+++
T Consensus 166 ~~~~~~~~gvf~~~~~d~--~~~~ll~~l~~---------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~ 234 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLDV--GSQLLLSTLTP---------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVE 234 (343)
T ss_dssp TEEEEECTTCTTSSSCCH--HHHHHHHHSCT---------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHH
T ss_pred ceEEEecCCccCCCCCcH--HHHHHHHhcCc---------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 455667788877653322 23334444422 1245899999999999999998888889999999999999
Q ss_pred HHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCccc
Q 016734 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLV 233 (384)
Q Consensus 154 ~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~ 233 (384)
.|++|+..++ +. +.++.+|..+
T Consensus 235 ~a~~~~~~~~-~~--~~~~~~d~~~------------------------------------------------------- 256 (343)
T 2pjd_A 235 ASRATLAANG-VE--GEVFASNVFS------------------------------------------------------- 256 (343)
T ss_dssp HHHHHHHHTT-CC--CEEEECSTTT-------------------------------------------------------
T ss_pred HHHHHHHHhC-CC--CEEEEccccc-------------------------------------------------------
Confidence 9999999987 54 5566665321
Q ss_pred ccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHH
Q 016734 234 GVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313 (384)
Q Consensus 234 ~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l 313 (384)
. ..++||+|+|||||+..... ...-..+++++..++++++|++.+..........+
T Consensus 257 ~---~~~~fD~Iv~~~~~~~g~~~---------------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 312 (343)
T 2pjd_A 257 E---VKGRFDMIISNPPFHDGMQT---------------------SLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDV 312 (343)
T ss_dssp T---CCSCEEEEEECCCCCSSSHH---------------------HHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHH
T ss_pred c---ccCCeeEEEECCCcccCccC---------------------CHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHH
Confidence 0 14579999999999742110 12335678888888899999887665544445544
Q ss_pred HHH
Q 016734 314 ISK 316 (384)
Q Consensus 314 ~~~ 316 (384)
.+.
T Consensus 313 l~~ 315 (343)
T 2pjd_A 313 LDE 315 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 61
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.33 E-value=6.4e-11 Score=112.42 Aligned_cols=61 Identities=8% Similarity=0.162 Sum_probs=54.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+|.+...|+... ++++|+|+|+|+.|++.|+++++..+ +..+|+++++|..
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~~~v~~~~~D~~ 133 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-APTPVDVIEGDIR 133 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCTT
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cCceEEEeecccc
Confidence 4689999999999998888764 58899999999999999999999887 7788999998853
No 62
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.33 E-value=2.6e-11 Score=121.70 Aligned_cols=79 Identities=15% Similarity=0.112 Sum_probs=62.3
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccC-----------------------------
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~----------------------------- 139 (384)
|-++++...+..+..- .....+||.+||||.+.+.++....+
T Consensus 177 pl~e~LAaall~l~~~---------~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a 247 (384)
T 3ldg_A 177 PIKENMAAAIILLSNW---------FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEA 247 (384)
T ss_dssp CCCHHHHHHHHHHTTC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCC---------CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHH
Confidence 6777776666555432 13468999999999998877654332
Q ss_pred ---------CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 140 ---------~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.+++|+|+|+.|++.|++|++.++ +.++|.++++|..
T Consensus 248 ~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~g-l~~~I~~~~~D~~ 293 (384)
T 3ldg_A 248 DEQADYDIQLDISGFDFDGRMVEIARKNAREVG-LEDVVKLKQMRLQ 293 (384)
T ss_dssp HHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCGG
T ss_pred HHhhhccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChH
Confidence 469999999999999999999998 8888999998743
No 63
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=1.6e-11 Score=132.02 Aligned_cols=135 Identities=19% Similarity=0.202 Sum_probs=97.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCC-CceEEEEcCCCCCCCcccccccCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~-~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
..+|||+|||+|.+++.++.. ...+|+++|+|+.+++.|++|++.|+ +. ++++++++|..+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~---------------- 601 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLA---------------- 601 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHH----------------
T ss_pred CCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHH----------------
Confidence 458999999999998887753 23479999999999999999999998 76 689999987421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
++. ...++||+|+||||+|....... +..
T Consensus 602 ------------------------------------~l~---~~~~~fD~Ii~DPP~f~~~~~~~--------~~~---- 630 (703)
T 3v97_A 602 ------------------------------------WLR---EANEQFDLIFIDPPTFSNSKRME--------DAF---- 630 (703)
T ss_dssp ------------------------------------HHH---HCCCCEEEEEECCCSBC---------------CC----
T ss_pred ------------------------------------HHH---hcCCCccEEEECCccccCCccch--------hHH----
Confidence 111 12468999999999997532110 000
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCe
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~ 323 (384)
.....+.+++..+..+++++|++.+.... .+...-.+.|++.|+.
T Consensus 631 ---~~~~~~~~ll~~a~~~LkpgG~L~~s~~~-~~~~~~~~~l~~~g~~ 675 (703)
T 3v97_A 631 ---DVQRDHLALMKDLKRLLRAGGTIMFSNNK-RGFRMDLDGLAKLGLK 675 (703)
T ss_dssp ---BHHHHHHHHHHHHHHHEEEEEEEEEEECC-TTCCCCHHHHHHTTEE
T ss_pred ---HHHHHHHHHHHHHHHhcCCCcEEEEEECC-cccccCHHHHHHcCCc
Confidence 13567888999999999999998766652 2233335677788864
No 64
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=1.6e-11 Score=123.44 Aligned_cols=78 Identities=18% Similarity=0.155 Sum_probs=61.5
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccC-----------------------------
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~----------------------------- 139 (384)
|-++++...+..+..- .....+||+|||||.+.+.++....+
T Consensus 184 pl~e~lAa~ll~l~~~---------~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a 254 (393)
T 3k0b_A 184 PIKETMAAALVLLTSW---------HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEA 254 (393)
T ss_dssp SCCHHHHHHHHHHSCC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCC---------CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHH
Confidence 6677776666554432 13457999999999998777654332
Q ss_pred ---------CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 140 ---------~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+|+|+|+|+.|++.|++|++.++ +.++|.++++|.
T Consensus 255 ~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~g-l~~~I~~~~~D~ 299 (393)
T 3k0b_A 255 EDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG-LGDLITFRQLQV 299 (393)
T ss_dssp HHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT-CTTCSEEEECCG
T ss_pred HHhhcccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 569999999999999999999998 888899999874
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.33 E-value=3.4e-11 Score=109.09 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=62.8
Q ss_pred CccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC
Q 016734 83 QLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 83 ~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n 162 (384)
.+-|..|-....+.++.+++... ...+|||||||+|.+...++...+..+++|+|+|+.+++.|++++..+
T Consensus 6 ~~~~~~~~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 76 (219)
T 3jwg_A 6 ETEKKLNLNQQRLGTVVAVLKSV---------NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID 76 (219)
T ss_dssp ------CHHHHHHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG
T ss_pred cCCcCCcchHHHHHHHHHHHhhc---------CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 33344344455566666666532 346899999999999999988777789999999999999999999887
Q ss_pred CCCCC----ceEEEEcCC
Q 016734 163 PHISE----LIEIRKVDN 176 (384)
Q Consensus 163 ~~l~~----~I~~~~~d~ 176 (384)
+ +.+ +++++.+|.
T Consensus 77 ~-~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 77 R-LPEMQRKRISLFQSSL 93 (219)
T ss_dssp G-SCHHHHTTEEEEECCS
T ss_pred c-cccccCcceEEEeCcc
Confidence 6 654 799998874
No 66
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=2.5e-11 Score=117.42 Aligned_cols=172 Identities=11% Similarity=0.035 Sum_probs=115.4
Q ss_pred cCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
+||.-+.+.....++. ++...|-+.+..+..... ..+.+|||||||+|.++..+++..+..+|+++|+|+.+
T Consensus 48 ~~g~~L~ldg~~~~~~-~de~~Y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~v 119 (294)
T 3adn_A 48 AFGRVMALDGVVQTTE-RDEFIYHEMMTHVPLLAH-------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGV 119 (294)
T ss_dssp TTCCEEEETTEEEEET-TTHHHHHHHHHHHHHHHS-------TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTH
T ss_pred CcceEEEECCeEeecc-CchhHHHHHHHHHHHhcC-------CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHH
Confidence 6888899999999998 887777776665432211 24569999999999999888876667899999999999
Q ss_pred HHHHHHHHHHCC--CC-CCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCC
Q 016734 152 LEWAEKNVKSNP--HI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (384)
Q Consensus 152 l~~A~~Ni~~n~--~l-~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 228 (384)
++.|++++...+ .+ ..+++++.+|..+
T Consensus 120 i~~ar~~~~~~~~~~~~~~rv~~~~~D~~~-------------------------------------------------- 149 (294)
T 3adn_A 120 VSFCRQYLPNHNAGSYDDPRFKLVIDDGVN-------------------------------------------------- 149 (294)
T ss_dssp HHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------------------------------------------------
T ss_pred HHHHHHhhhhcccccccCCceEEEEChHHH--------------------------------------------------
Confidence 999999986531 02 2478888887432
Q ss_pred CCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecC--
Q 016734 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR-- 306 (384)
Q Consensus 229 ~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk-- 306 (384)
.+ ....++||+|+||+|--. .| .. -.+...++++..+.++.+|++.+..+.
T Consensus 150 --~l---~~~~~~fDvIi~D~~~p~-------~~-------~~--------~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 150 --FV---NQTSQTFDVIISDCTDPI-------GP-------GE--------SLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp --------CCCCCEEEEEECC--------------------------------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred --HH---hhcCCCccEEEECCCCcc-------Cc-------ch--------hccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 01 112468999999986311 01 00 011234455667788999998776542
Q ss_pred --CCCHHHHHHHHHHcCCeEEEEEE
Q 016734 307 --KSNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 307 --~~~l~~l~~~L~~~g~~~v~~~e 329 (384)
...+..+.+.+++. |..+....
T Consensus 203 ~~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3adn_A 203 LQQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp SCCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cchHHHHHHHHHHHHH-CCCeEEEE
Confidence 23366777777776 55555543
No 67
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.32 E-value=2.4e-12 Score=128.24 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=99.5
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~ 171 (384)
..++++.+++.. ....+|||+|||+|.++..++.+. +..+++|+|+|+.+++.| .++.+
T Consensus 26 ~l~~~~~~~~~~---------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~ 85 (421)
T 2ih2_A 26 EVVDFMVSLAEA---------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEG 85 (421)
T ss_dssp HHHHHHHHHCCC---------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEE
T ss_pred HHHHHHHHhhcc---------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcE
Confidence 355666666532 124589999999999998888776 678999999999998877 25888
Q ss_pred EEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCc
Q 016734 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251 (384)
Q Consensus 172 ~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy 251 (384)
+++|..+ . ...++||+|+|||||
T Consensus 86 ~~~D~~~-------------------------------------------------------~--~~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 86 ILADFLL-------------------------------------------------------W--EPGEAFDLILGNPPY 108 (421)
T ss_dssp EESCGGG-------------------------------------------------------C--CCSSCEEEEEECCCC
T ss_pred EeCChhh-------------------------------------------------------c--CccCCCCEEEECcCc
Confidence 8877421 0 023689999999999
Q ss_pred ccchhhhc----cCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC----CCHHHHHHHHHHcCC
Q 016734 252 FESMEEAG----LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGV 322 (384)
Q Consensus 252 ~~s~~~~~----~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~----~~l~~l~~~L~~~g~ 322 (384)
........ ..+.. ...........+|.......+++.+..+++.+|.+.+.+... ...+.+.+.|.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 109 GIVGEASKYPIHVFKAV-KDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CCBSCTTTCSBCCCHHH-HHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cCcccccccccccCHHH-HHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 87543110 00000 000000001123334456677788888889999987777532 256888898888876
No 68
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.31 E-value=4.6e-11 Score=117.67 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=77.0
Q ss_pred hccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 70 ~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..+||..+.+...+++|+ ++...|-+.+..+..... ..+.+|||||||+|+++..|+...+..+|+++|+|+
T Consensus 83 ~~~~g~~l~ldg~~~~~~-~de~~y~e~L~~l~l~~~-------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~ 154 (334)
T 1xj5_A 83 SATYGKVLVLDGVIQLTE-RDECAYQEMITHLPLCSI-------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK 154 (334)
T ss_dssp ESSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHTTS-------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH
T ss_pred cCCCCeEEEECCEeecCc-CcchHHHHHHHHHHHhhC-------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH
Confidence 458999999999999998 776666665555432211 235699999999999999988776678999999999
Q ss_pred HHHHHHHHHHHHC--CCC-CCceEEEEcCC
Q 016734 150 VALEWAEKNVKSN--PHI-SELIEIRKVDN 176 (384)
Q Consensus 150 ~al~~A~~Ni~~n--~~l-~~~I~~~~~d~ 176 (384)
.+++.|++|+... + + ..+++++.+|.
T Consensus 155 ~~l~~Ar~~~~~~~~g-l~~~rv~~~~~D~ 183 (334)
T 1xj5_A 155 MVVDVSKQFFPDVAIG-YEDPRVNLVIGDG 183 (334)
T ss_dssp HHHHHHHHHCHHHHGG-GGSTTEEEEESCH
T ss_pred HHHHHHHHHHHhhccc-cCCCcEEEEECCH
Confidence 9999999998752 3 3 35799998873
No 69
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.30 E-value=2.7e-11 Score=115.61 Aligned_cols=97 Identities=11% Similarity=-0.003 Sum_probs=60.2
Q ss_pred hCCCcccceecc---CCCCccccCCCHHHHHHHHHHHhhccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCC
Q 016734 35 LYPSFEPFVFYS---RDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111 (384)
Q Consensus 35 ~~p~l~~~v~~~---~~g~~~idf~~~~av~~Lt~alL~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~ 111 (384)
.-|.|..|+... ..|...+-- +. -+.+||+.++ |.++.++.|+.+....
T Consensus 26 ~~~~~~~~~~~~g~~~~~~~~~~i---------~g--~~~~~g~~~~----------~~~~~l~~~l~~~~~~------- 77 (281)
T 3bzb_A 26 QRSRVERYQSPAGAPLQCSVQVQT---------TQ--EHPLWTSHVW----------SGARALADTLCWQPEL------- 77 (281)
T ss_dssp ---CEEEEECCSSCC-CCEEEEEC---------C-----------------------CHHHHHHHHHHHCGGG-------
T ss_pred HHHHHHHHHhhccccccCCeEEEE---------CC--CCCCCCceee----------cHHHHHHHHHHhcchh-------
Confidence 345677777654 334333322 11 1457777655 6788888888876532
Q ss_pred CCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeC-cHHHHHHHHHHHHHC
Q 016734 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM-TDVALEWAEKNVKSN 162 (384)
Q Consensus 112 ~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDi-d~~al~~A~~Ni~~n 162 (384)
....+|||||||+|++++.++.. ...+|+|+|+ |+.+++.|++|++.|
T Consensus 78 --~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N 126 (281)
T 3bzb_A 78 --IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREH 126 (281)
T ss_dssp --TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTT
T ss_pred --cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHh
Confidence 13458999999999999887764 2349999999 899999999999544
No 70
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=2.3e-12 Score=132.80 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=75.8
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
++|+..+. .++.|.|+ +.++.|..++.+.+.. ....+|||||||+|.++..++. .+..+|+|+|+++
T Consensus 125 ~~y~~~~~-~~~~L~d~-~~t~~~~~~il~~l~~---------~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~- 191 (480)
T 3b3j_A 125 QFYGYLSQ-QQNMMQDY-VRTGTYQRAILQNHTD---------FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST- 191 (480)
T ss_dssp EGGGCSCH-HHHHHHHH-HHHHHHHHHHHHTGGG---------TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-
T ss_pred HHHhhhcc-chhhhcCh-HhHHHHHHHHHHhhhh---------cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-
Confidence 45555444 66788998 8899999988877643 1346899999999999987775 4667999999999
Q ss_pred HHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 151 ALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 151 al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+++.|++|++.++ +.++|+++.+|..
T Consensus 192 ~l~~A~~~~~~~g-l~~~v~~~~~d~~ 217 (480)
T 3b3j_A 192 MAQHAEVLVKSNN-LTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred HHHHHHHHHHHcC-CCCcEEEEECchh
Confidence 9999999999998 8889999998753
No 71
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.30 E-value=4.6e-11 Score=108.23 Aligned_cols=78 Identities=13% Similarity=0.160 Sum_probs=64.5
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCC-
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE- 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~- 167 (384)
|-....+.++.+.+... ...+|||||||+|.+...++...+..+++|+|+|+.+++.|++++..++ +.+
T Consensus 12 ~~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~ 81 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQS---------NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLR-LPRN 81 (217)
T ss_dssp CHHHHHHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHH
T ss_pred CHHHHHHHHHHHHHHhc---------CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcc
Confidence 55566677777777542 3469999999999999999887777899999999999999999998886 664
Q ss_pred ---ceEEEEcCC
Q 016734 168 ---LIEIRKVDN 176 (384)
Q Consensus 168 ---~I~~~~~d~ 176 (384)
++.++.+|.
T Consensus 82 ~~~~v~~~~~d~ 93 (217)
T 3jwh_A 82 QWERLQLIQGAL 93 (217)
T ss_dssp HHTTEEEEECCT
T ss_pred cCcceEEEeCCc
Confidence 799998874
No 72
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=4.9e-11 Score=114.84 Aligned_cols=90 Identities=9% Similarity=0.117 Sum_probs=67.7
Q ss_pred cCCcE--EEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 72 DHGLN--WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 72 ~fgl~--~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..|+. |++....+.|+. ..+- ..+.+++. ...+|||+|||+|.+++.+|.. ...+|+|+|+|+
T Consensus 94 E~G~~~~~D~~k~~f~~~~--~~er-~ri~~~~~-----------~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np 158 (278)
T 3k6r_A 94 ENGIKYKLDVAKIMFSPAN--VKER-VRMAKVAK-----------PDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDP 158 (278)
T ss_dssp ETTEEEEEETTTSCCCGGG--HHHH-HHHHHHCC-----------TTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCH
T ss_pred ECCEEEEEeccceEEcCCc--HHHH-HHHHHhcC-----------CCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCH
Confidence 45665 455566788872 1111 12334332 3468999999999998877754 456999999999
Q ss_pred HHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 150 VALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 150 ~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.|++.|++|++.|+ ++++|+++++|..
T Consensus 159 ~a~~~~~~N~~~N~-v~~~v~~~~~D~~ 185 (278)
T 3k6r_A 159 YTFKFLVENIHLNK-VEDRMSAYNMDNR 185 (278)
T ss_dssp HHHHHHHHHHHHTT-CTTTEEEECSCTT
T ss_pred HHHHHHHHHHHHcC-CCCcEEEEeCcHH
Confidence 99999999999998 9999999988853
No 73
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.29 E-value=1.3e-10 Score=104.80 Aligned_cols=132 Identities=17% Similarity=0.240 Sum_probs=98.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||||||+|.++..++... +..+++|+|+++.+++.|++++..++ +. ++.++.+|..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~~~--------------- 99 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-LK-NVEVLKSEENK--------------- 99 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEECBTTB---------------
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeccccc---------------
Confidence 34689999999999999998886 67899999999999999999999887 55 69998887431
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+ .+ .+++||+|+|+-.+.... +
T Consensus 100 --------------------------------------~-~~--~~~~fD~v~~~~~l~~~~---------------~-- 121 (219)
T 3dh0_A 100 --------------------------------------I-PL--PDNTVDFIFMAFTFHELS---------------E-- 121 (219)
T ss_dssp --------------------------------------C-SS--CSSCEEEEEEESCGGGCS---------------S--
T ss_pred --------------------------------------C-CC--CCCCeeEEEeehhhhhcC---------------C--
Confidence 0 00 346899999996554320 0
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEe-c-----------CCCCHHHHHHHHHHcCCeEEEEEEe
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMV-G-----------RKSNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v-g-----------k~~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
...++++..++++.+|++.... . ..-+.+++.+.|++.|++.+++..+
T Consensus 122 ---------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 122 ---------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV 181 (219)
T ss_dssp ---------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ---------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee
Confidence 2445566667778888765432 2 2235799999999999998887654
No 74
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.29 E-value=4.9e-11 Score=118.46 Aligned_cols=130 Identities=21% Similarity=0.132 Sum_probs=95.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+| |+|.++..++...+..+|+|+|+|+.+++.|++|++.++ +. +|+++.+|..+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~---------------- 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKP---------------- 233 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSC----------------
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhh----------------
Confidence 46899999 999999998877666799999999999999999999998 76 799998875320
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+.. ...++||+|++||||...
T Consensus 234 ------------------------------------l~~--~~~~~fD~Vi~~~p~~~~--------------------- 254 (373)
T 2qm3_A 234 ------------------------------------LPD--YALHKFDTFITDPPETLE--------------------- 254 (373)
T ss_dssp ------------------------------------CCT--TTSSCBSEEEECCCSSHH---------------------
T ss_pred ------------------------------------chh--hccCCccEEEECCCCchH---------------------
Confidence 000 013579999999998742
Q ss_pred cCchHHHHHHHHHHHHHhhccCe-EEEEEec-CCCCH---HHHHHHHH-HcCCeEEEEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFR-WYTSMVG-RKSNL---KFLISKLR-KVGVTIVKTTE 329 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~-w~t~~vg-k~~~l---~~l~~~L~-~~g~~~v~~~e 329 (384)
| ...+++++.+.++++| +..+.+. ...+. ..+.+.+. +.|+....+..
T Consensus 255 --~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 255 --A----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp --H----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred --H----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhhh
Confidence 1 2556677777788877 4233343 24566 77788888 88876544443
No 75
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.28 E-value=1.7e-11 Score=113.07 Aligned_cols=130 Identities=11% Similarity=0.113 Sum_probs=93.0
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.++..+|...++..|+|+|+++.+++.|++|++.++ +. +|.++.+|..+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-l~-nv~~~~~Da~~----------------- 95 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-LS-NLRVMCHDAVE----------------- 95 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-CS-SEEEECSCHHH-----------------
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-CC-cEEEEECCHHH-----------------
Confidence 458999999999999999999999999999999999999999999987 65 49998877321
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEEC--CCcccchhhhccCCccccCCCcccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN--PPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cN--PPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
++.... .+++||.|++| +||......... +
T Consensus 96 -----------------------------------~l~~~~-~~~~~d~v~~~~~~p~~~~~~~~rr------------~ 127 (218)
T 3dxy_A 96 -----------------------------------VLHKMI-PDNSLRMVQLFFPDPWHKARHNKRR------------I 127 (218)
T ss_dssp -----------------------------------HHHHHS-CTTCEEEEEEESCCCCCSGGGGGGS------------S
T ss_pred -----------------------------------HHHHHc-CCCChheEEEeCCCCccchhhhhhh------------h
Confidence 111101 35789999999 787654322110 0
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHc
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~ 320 (384)
+ ...++++..++++.+|++.+...-..-.+.+.+.+...
T Consensus 128 ~--------~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 128 V--------QVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp C--------SHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred h--------hHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 0 12345666677888998766554333356677777665
No 76
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.28 E-value=2.8e-10 Score=102.42 Aligned_cols=139 Identities=9% Similarity=0.045 Sum_probs=96.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|++++ + +.++.+|..+
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~-----~~~~~~d~~~----------------- 96 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL---G-----RPVRTMLFHQ----------------- 96 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---T-----SCCEECCGGG-----------------
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc---C-----CceEEeeecc-----------------
Confidence 468999999999998888765 679999999999999999987 2 3344444211
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+. .+++||+|+|+..+.....
T Consensus 97 ---------------------------------------~~-~~~~fD~v~~~~~l~~~~~------------------- 117 (211)
T 3e23_A 97 ---------------------------------------LD-AIDAYDAVWAHACLLHVPR------------------- 117 (211)
T ss_dssp ---------------------------------------CC-CCSCEEEEEECSCGGGSCH-------------------
T ss_pred ---------------------------------------CC-CCCcEEEEEecCchhhcCH-------------------
Confidence 01 3578999999976653211
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCC--------------CCHHHHHHHHHHcC-CeEEEEEEee----CCCee
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--------------SNLKFLISKLRKVG-VTIVKTTEFV----QGQTC 336 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~--------------~~l~~l~~~L~~~g-~~~v~~~e~~----qG~t~ 336 (384)
.-...++++..++++.+|++...+... -+.+++.++|+++| ++.+.+.+.. .|...
T Consensus 118 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~ 192 (211)
T 3e23_A 118 -----DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELA 192 (211)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEE
T ss_pred -----HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCc
Confidence 013455666667778888765443322 37899999999999 9887775442 23346
Q ss_pred EEEEEEecC
Q 016734 337 RWGLAWSFV 345 (384)
Q Consensus 337 Rw~~AWsf~ 345 (384)
+|+.+..-.
T Consensus 193 ~wl~~~~~~ 201 (211)
T 3e23_A 193 QFLHVSVRK 201 (211)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 675554433
No 77
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.28 E-value=2.9e-10 Score=106.17 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=53.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++... +.+++|+|+|+.+++.|++++..++ +.+++.++.+|.
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 120 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG-LANRVTFSYADA 120 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECcc
Confidence 34699999999999988888765 7899999999999999999999987 788899998874
No 78
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=3.2e-11 Score=121.29 Aligned_cols=131 Identities=14% Similarity=0.119 Sum_probs=90.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.+++.++.. ++.|+|+|+|+.|++.|++|++.|+ +.. .+..+|..+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng-~~~--~~~~~D~~~----------------- 272 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLG-LRV--DIRHGEALP----------------- 272 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-CCC--EEEESCHHH-----------------
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhC-CCC--cEEEccHHH-----------------
Confidence 468999999999999888864 5679999999999999999999998 664 344555321
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
++... .+.||+|+||||++.......
T Consensus 273 -----------------------------------~l~~~---~~~fD~Ii~dpP~f~~~~~~~---------------- 298 (393)
T 4dmg_A 273 -----------------------------------TLRGL---EGPFHHVLLDPPTLVKRPEEL---------------- 298 (393)
T ss_dssp -----------------------------------HHHTC---CCCEEEEEECCCCCCSSGGGH----------------
T ss_pred -----------------------------------HHHHh---cCCCCEEEECCCcCCCCHHHH----------------
Confidence 11111 233999999999986432110
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEE-EEecCCCCHHHHH----HHHHHcCCe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYT-SMVGRKSNLKFLI----SKLRKVGVT 323 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t-~~vgk~~~l~~l~----~~L~~~g~~ 323 (384)
-.....+.+++..+.++++++|++. +........+.+. +.+.+.|..
T Consensus 299 -~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 299 -PAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp -HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 0124557788889999999998875 4554444444443 344555654
No 79
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.26 E-value=3e-10 Score=107.19 Aligned_cols=58 Identities=14% Similarity=0.263 Sum_probs=51.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
+.+|||||||+|.++..++.. +.+++|+|+++.+++.|++++..++ +.+++.++.+|.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 126 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAA 126 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCG
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCH
Confidence 568999999999998888765 7899999999999999999999887 777899999874
No 80
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.26 E-value=1.4e-10 Score=107.35 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=97.9
Q ss_pred CCCeEEEECCcccHHHHHHHhh-ccCCEEEEEeCcHHHHHHHHHHHHHC-CCCCCceEEEEcCCCCCCCcccccccCCcc
Q 016734 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSV 192 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~-~~~~~v~gvDid~~al~~A~~Ni~~n-~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~ 192 (384)
...+|||+|||+|.++..++.. .++.+++|+|+++.+++.|++|++.+ + .+++.++.+|..+
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~-------------- 159 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEE-------------- 159 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGG--------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhh--------------
Confidence 3458999999999999988887 45789999999999999999999887 6 2468988877421
Q ss_pred ccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccc
Q 016734 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (384)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E 272 (384)
. .+ .++.||+|+||+|-.
T Consensus 160 --------------------------------------~--~~--~~~~~D~v~~~~~~~-------------------- 177 (258)
T 2pwy_A 160 --------------------------------------A--EL--EEAAYDGVALDLMEP-------------------- 177 (258)
T ss_dssp --------------------------------------C--CC--CTTCEEEEEEESSCG--------------------
T ss_pred --------------------------------------c--CC--CCCCcCEEEECCcCH--------------------
Confidence 0 01 236799999987621
Q ss_pred ccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEee
Q 016734 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (384)
Q Consensus 273 ~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~ 331 (384)
..++++..++++.+|++.+......++..+.+.|++.|+..+++.+..
T Consensus 178 -----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~ 225 (258)
T 2pwy_A 178 -----------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVG 225 (258)
T ss_dssp -----------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEEE
T ss_pred -----------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEee
Confidence 122344556677888887777655678889999999999888888754
No 81
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.26 E-value=1.5e-10 Score=112.03 Aligned_cols=175 Identities=10% Similarity=0.013 Sum_probs=111.5
Q ss_pred cCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
+||..+.+........ .....|-+.+..+..... ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 60 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 131 (304)
T 3bwc_A 60 PWGTVMALDGCIQVTD-YDEFVYHEVLGHTSLCSH-------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEV 131 (304)
T ss_dssp SCCEEEEETTEEEEET-TTHHHHHHHHHHHHHTTS-------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHH
T ss_pred ccceEEEECCeeeeec-ccchHHHHHHhhhhhhcC-------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHH
Confidence 4677776665444443 333445554444322111 23568999999999999888876567899999999999
Q ss_pred HHHHHHHHHH--CCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCC
Q 016734 152 LEWAEKNVKS--NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (384)
Q Consensus 152 l~~A~~Ni~~--n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 229 (384)
++.|++++.. .+....+++++.+|..+
T Consensus 132 i~~a~~~~~~~~~~~~~~~v~~~~~D~~~--------------------------------------------------- 160 (304)
T 3bwc_A 132 MEQSKQHFPQISRSLADPRATVRVGDGLA--------------------------------------------------- 160 (304)
T ss_dssp HHHHHHHCHHHHGGGGCTTEEEEESCHHH---------------------------------------------------
T ss_pred HHHHHHHhHHhhcccCCCcEEEEECcHHH---------------------------------------------------
Confidence 9999998742 11123579998887321
Q ss_pred CcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC--
Q 016734 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-- 307 (384)
Q Consensus 230 ~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~-- 307 (384)
+.... .+++||+|+||+|+... |... .+-..++++..+.++.+|++.+..+..
T Consensus 161 -~~~~~--~~~~fDvIi~d~~~~~~-------~~~~---------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 215 (304)
T 3bwc_A 161 -FVRQT--PDNTYDVVIIDTTDPAG-------PASK---------------LFGEAFYKDVLRILKPDGICCNQGESIWL 215 (304)
T ss_dssp -HHHSS--CTTCEEEEEEECC-------------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTT
T ss_pred -HHHhc--cCCceeEEEECCCCccc-------cchh---------------hhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 00000 25689999999876321 1000 011344456667888999987766532
Q ss_pred --CCHHHHHHHHHHcCCeEEEEEEe
Q 016734 308 --SNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 308 --~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
.....+.+.|++.||..+++...
T Consensus 216 ~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 216 DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 24678888999999988877654
No 82
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.25 E-value=4.8e-11 Score=118.90 Aligned_cols=135 Identities=15% Similarity=0.168 Sum_probs=93.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.+++.++.. ..+|+|+|+++.+++.|++|++.|+ +.+ +.++.+|..+
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~-~~~-~~~~~~d~~~----------------- 268 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG-LGN-VRVLEANAFD----------------- 268 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT-CTT-EEEEESCHHH-----------------
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-CCC-ceEEECCHHH-----------------
Confidence 358999999999999988876 5689999999999999999999998 765 8998887421
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
++..+...+++||+|+||||++.......
T Consensus 269 -----------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~---------------- 297 (382)
T 1wxx_A 269 -----------------------------------LLRRLEKEGERFDLVVLDPPAFAKGKKDV---------------- 297 (382)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCCCSCCSTTSH----------------
T ss_pred -----------------------------------HHHHHHhcCCCeeEEEECCCCCCCChhHH----------------
Confidence 11111112568999999999986432110
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEec-CCCCH----HHHHHHHHHcCCe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVG-RKSNL----KFLISKLRKVGVT 323 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg-k~~~l----~~l~~~L~~~g~~ 323 (384)
.....-...++.++..+++++|++.+... ..-.. +.+.+.+.+.|..
T Consensus 298 -~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 298 -ERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp -HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 00234567788888888888887654432 22222 2233455566653
No 83
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.24 E-value=1e-10 Score=112.81 Aligned_cols=172 Identities=13% Similarity=0.073 Sum_probs=110.1
Q ss_pred cCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
.||..+.++..++++. ++...|-+.+..+..... ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 55 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 126 (296)
T 1inl_A 55 DLGVVFALDGITMTTE-KDEFMYHEMLAHVPMFLH-------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLV 126 (296)
T ss_dssp TTEEEEEETTEEEEET-TTHHHHHHHHHHHHHHHS-------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHH
T ss_pred CCcEEEEECCEEeecc-cchhHHHHHHhHHHHhcC-------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHH
Confidence 4788888887677776 554445554443311110 13468999999999999888876567899999999999
Q ss_pred HHHHHHHHHH--CCCC-CCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCC
Q 016734 152 LEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (384)
Q Consensus 152 l~~A~~Ni~~--n~~l-~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 228 (384)
++.|++|+.. ++ + .++++++.+|..+
T Consensus 127 ~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~-------------------------------------------------- 155 (296)
T 1inl_A 127 IEAARKYLKQTSCG-FDDPRAEIVIANGAE-------------------------------------------------- 155 (296)
T ss_dssp HHHHHHHCHHHHGG-GGCTTEEEEESCHHH--------------------------------------------------
T ss_pred HHHHHHHhHhhccc-cCCCceEEEECcHHH--------------------------------------------------
Confidence 9999999864 32 3 3579999887321
Q ss_pred CCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC-
Q 016734 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK- 307 (384)
Q Consensus 229 ~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~- 307 (384)
.+ ....++||+|+||+|.... .|.. -.+...++++..++++.+|++.+..+..
T Consensus 156 --~l---~~~~~~fD~Ii~d~~~~~~------~~~~---------------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 156 --YV---RKFKNEFDVIIIDSTDPTA------GQGG---------------HLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp --HG---GGCSSCEEEEEEEC-------------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred --HH---hhCCCCceEEEEcCCCccc------Cchh---------------hhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 01 0124679999999874201 1100 0022445566677889999988776532
Q ss_pred ---CCHHHHHHHHHHcCCeEEEEEE
Q 016734 308 ---SNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 308 ---~~l~~l~~~L~~~g~~~v~~~e 329 (384)
..+..+.+.|++. +..+....
T Consensus 210 ~~~~~~~~~~~~l~~~-F~~v~~~~ 233 (296)
T 1inl_A 210 YDIGWFKLAYRRISKV-FPITRVYL 233 (296)
T ss_dssp TTHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cCHHHHHHHHHHHHHH-CCceEEEE
Confidence 2255667777776 55555543
No 84
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.24 E-value=1.6e-10 Score=104.68 Aligned_cols=58 Identities=26% Similarity=0.355 Sum_probs=49.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCC----CCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l----~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++.. +.+++|+|+++.+++.|++++..++ + .+++.++.+|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENA 92 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecc
Confidence 468999999999998888866 7799999999999999999998776 4 23578887764
No 85
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.24 E-value=6e-11 Score=112.38 Aligned_cols=129 Identities=12% Similarity=0.090 Sum_probs=98.8
Q ss_pred CCCeEEEECCcccHHHHHHHhh-ccCCEEEEEeCcHHHHHHHHHHHHHC-CCCCCceEEEEcCCCCCCCcccccccCCcc
Q 016734 115 DKVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSV 192 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~-~~~~~v~gvDid~~al~~A~~Ni~~n-~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~ 192 (384)
...+|||+|||+|.++..++.. .++.+++|+|+++.+++.|++|++.+ + + +++.++.+|..+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~-~~v~~~~~d~~~-------------- 173 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-I-GNVRTSRSDIAD-------------- 173 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-C-TTEEEECSCTTT--------------
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-C-CcEEEEECchhc--------------
Confidence 3468999999999999998877 56789999999999999999999988 6 3 368888776421
Q ss_pred ccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccc
Q 016734 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (384)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E 272 (384)
.+ .+++||+|+||+|-.
T Consensus 174 -----------------------------------------~~--~~~~fD~Vi~~~~~~-------------------- 190 (275)
T 1yb2_A 174 -----------------------------------------FI--SDQMYDAVIADIPDP-------------------- 190 (275)
T ss_dssp -----------------------------------------CC--CSCCEEEEEECCSCG--------------------
T ss_pred -----------------------------------------cC--cCCCccEEEEcCcCH--------------------
Confidence 01 236799999987621
Q ss_pred ccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCC
Q 016734 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333 (384)
Q Consensus 273 ~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG 333 (384)
..++++...+++.+|++........+...+.+.|++.|+..+++.+....
T Consensus 191 -----------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 240 (275)
T 1yb2_A 191 -----------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVELMKR 240 (275)
T ss_dssp -----------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEEEEEC
T ss_pred -----------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEEEecc
Confidence 02334555677888887766665557788889999999988888776543
No 86
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.24 E-value=3.4e-10 Score=108.05 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=53.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++...+ .+|+|+|+|+.+++.|++++..++ +.++|.++.+|.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGW 131 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCG
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCH
Confidence 346899999999999988887755 899999999999999999999998 888899998873
No 87
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.24 E-value=2e-10 Score=103.91 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=48.7
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++...+ +++|+|+|+.+++.|++++..++ .++.++.+|.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 94 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDA 94 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCT
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC---CCceEEECch
Confidence 46899999999999988887654 99999999999999999998875 4688988874
No 88
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.24 E-value=3.8e-11 Score=120.00 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=84.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||+|||+|.+++.++.. ...+|+|+|+++.+++.|++|++.|+ +.++++++.+|..+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~----------------- 278 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFE----------------- 278 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHH-----------------
Confidence 458999999999999888865 33499999999999999999999998 77689999887421
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
++..+....++||+|++|||++.......
T Consensus 279 -----------------------------------~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~---------------- 307 (396)
T 2as0_A 279 -----------------------------------EMEKLQKKGEKFDIVVLDPPAFVQHEKDL---------------- 307 (396)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCCCSCSSGGGH----------------
T ss_pred -----------------------------------HHHHHHhhCCCCCEEEECCCCCCCCHHHH----------------
Confidence 11111112468999999999986432110
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYT 301 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t 301 (384)
-....-...++.++..+++.+|++.
T Consensus 308 -~~~~~~~~~~l~~~~~~LkpgG~lv 332 (396)
T 2as0_A 308 -KAGLRAYFNVNFAGLNLVKDGGILV 332 (396)
T ss_dssp -HHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -HHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 0013446677888888888888653
No 89
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.24 E-value=6.3e-11 Score=106.17 Aligned_cols=53 Identities=21% Similarity=0.058 Sum_probs=44.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
...+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++|+. +++++.+|
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d 103 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-------GVNFMVAD 103 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-------TSEEEECC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-------CCEEEECc
Confidence 3468999999999998888765 34489999999999999999875 37788776
No 90
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.23 E-value=3.4e-10 Score=103.20 Aligned_cols=74 Identities=15% Similarity=0.039 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceE
Q 016734 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (384)
Q Consensus 91 r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~ 170 (384)
...+..++.+++.... ....+|||||||+|.+...++.. +.+++|+|+++.+++.|++++..++ + ++.
T Consensus 20 ~~~~~~~~~~~l~~~~-------~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~-~--~~~ 87 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENN-------LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQG-L--KPR 87 (246)
T ss_dssp HHHHHHHHHHHHHTTT-------CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTT-C--CCE
T ss_pred HHHHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcC-C--CeE
Confidence 4556777777775421 13569999999999998887765 6799999999999999999998876 4 588
Q ss_pred EEEcCC
Q 016734 171 IRKVDN 176 (384)
Q Consensus 171 ~~~~d~ 176 (384)
++.+|.
T Consensus 88 ~~~~d~ 93 (246)
T 1y8c_A 88 LACQDI 93 (246)
T ss_dssp EECCCG
T ss_pred EEeccc
Confidence 877663
No 91
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.23 E-value=1e-10 Score=107.18 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=97.5
Q ss_pred CCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH
Q 016734 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (384)
Q Consensus 82 ~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~ 161 (384)
...+|+ |.++.++..+...+.. ...+|||||||+|.++..++.. +.+|+|+|+++.+++.|+++
T Consensus 26 ~~~~~~-~~~~~l~~~~~~~~~~----------~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--- 89 (226)
T 3m33_A 26 ARVLSG-PDPELTFDLWLSRLLT----------PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN--- 89 (226)
T ss_dssp CCEESS-SCTTHHHHHHHHHHCC----------TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH---
T ss_pred ccccCC-CCHHHHHHHHHHhcCC----------CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh---
Confidence 355777 8877777766654321 3468999999999998888765 67999999999999999998
Q ss_pred CCCCCCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccC-CC
Q 016734 162 NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GE 240 (384)
Q Consensus 162 n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~-~~ 240 (384)
. .+++++.+|..+. + ... ++
T Consensus 90 ~----~~~~~~~~d~~~~----------------------------------------------------~---~~~~~~ 110 (226)
T 3m33_A 90 A----PHADVYEWNGKGE----------------------------------------------------L---PAGLGA 110 (226)
T ss_dssp C----TTSEEEECCSCSS----------------------------------------------------C---CTTCCC
T ss_pred C----CCceEEEcchhhc----------------------------------------------------c---CCcCCC
Confidence 2 2488888875310 0 002 56
Q ss_pred cEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHc
Q 016734 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320 (384)
Q Consensus 241 ~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~ 320 (384)
+||+|+||+. +. .++++..++++++|++. ..+...+...+.+.|.+.
T Consensus 111 ~fD~v~~~~~-----------~~---------------------~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~ 157 (226)
T 3m33_A 111 PFGLIVSRRG-----------PT---------------------SVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAV 157 (226)
T ss_dssp CEEEEEEESC-----------CS---------------------GGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHT
T ss_pred CEEEEEeCCC-----------HH---------------------HHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHC
Confidence 8999999931 11 11122334566677765 444467888999999999
Q ss_pred CCeEEEEE
Q 016734 321 GVTIVKTT 328 (384)
Q Consensus 321 g~~~v~~~ 328 (384)
|+..+.+.
T Consensus 158 Gf~~~~~~ 165 (226)
T 3m33_A 158 GWDIVAED 165 (226)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEE
Confidence 99866654
No 92
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.23 E-value=8.1e-11 Score=108.77 Aligned_cols=80 Identities=9% Similarity=0.007 Sum_probs=66.0
Q ss_pred CCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCC
Q 016734 86 PTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPH 164 (384)
Q Consensus 86 PrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~ 164 (384)
+. |++..++.++...... ....+|||||||+|..++.++...+ +.+|+++|+|+++++.|++|++.++
T Consensus 37 i~-~~~~~~l~~l~~~~~~---------~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g- 105 (221)
T 3dr5_A 37 PD-EMTGQLLTTLAATTNG---------NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG- 105 (221)
T ss_dssp CC-HHHHHHHHHHHHHSCC---------TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-
T ss_pred CC-HHHHHHHHHHHHhhCC---------CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-
Confidence 44 7788888777765421 1234899999999999999998765 7899999999999999999999998
Q ss_pred CC-CceEEEEcCC
Q 016734 165 IS-ELIEIRKVDN 176 (384)
Q Consensus 165 l~-~~I~~~~~d~ 176 (384)
+. ++|+++.+|.
T Consensus 106 ~~~~~i~~~~gda 118 (221)
T 3dr5_A 106 YSPSRVRFLLSRP 118 (221)
T ss_dssp CCGGGEEEECSCH
T ss_pred CCcCcEEEEEcCH
Confidence 77 7899998873
No 93
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.22 E-value=1.5e-10 Score=110.31 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=49.9
Q ss_pred CeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCC--CceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS--ELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~--~~I~~~~~d~~ 177 (384)
.+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++++..++ +. .+|.++.+|..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAP-ADVRDRCTLVQGDMS 143 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSC-HHHHTTEEEEECBTT
T ss_pred CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcc-cccccceEEEeCchh
Confidence 48999999999998888865 6799999999999999999998765 32 57999998853
No 94
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.22 E-value=1.2e-10 Score=106.79 Aligned_cols=131 Identities=18% Similarity=0.116 Sum_probs=94.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
+.+|||||||+|.+...|+. ++.+|+|+|+++.+++.|++++...+ ...++.++.+|..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~----------------- 126 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFT----------------- 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTT-----------------
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhc-----------------
Confidence 35999999999999887764 67899999999999999999998765 55679998887532
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+ ...++||+|+|+..+..-.. .
T Consensus 127 -----------------------------------~-----~~~~~fD~v~~~~~l~~~~~-------------~----- 148 (235)
T 3lcc_A 127 -----------------------------------W-----RPTELFDLIFDYVFFCAIEP-------------E----- 148 (235)
T ss_dssp -----------------------------------C-----CCSSCEEEEEEESSTTTSCG-------------G-----
T ss_pred -----------------------------------C-----CCCCCeeEEEEChhhhcCCH-------------H-----
Confidence 0 02358999999876553210 0
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEe-cCC---------CCHHHHHHHHHHcCCeEEEEEEe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMV-GRK---------SNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~v-gk~---------~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
-...++++..++++++|++.+.. ... -+.+++.++|++.||..+.+...
T Consensus 149 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 149 ------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp ------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred ------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 13345566666777777765432 211 25789999999999987776554
No 95
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.22 E-value=3e-10 Score=106.37 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=53.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++...++.+++|+|+++.+++.|++++..++ +. ++.++.+|.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~ 96 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG-IK-NVKFLQANI 96 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CcEEEEccc
Confidence 4569999999999999999988888999999999999999999999887 54 588888774
No 96
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.22 E-value=2.8e-10 Score=107.94 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceE
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~ 170 (384)
..++.++.+.+... ....+|||||||+|..+..++..++ +.+++|+|+|+.+++.|++++...+ . +++
T Consensus 7 ~~~~~~~~~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~--~v~ 75 (284)
T 3gu3_A 7 DDYVSFLVNTVWKI--------TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-Y--DSE 75 (284)
T ss_dssp HHHHHHHHHTTSCC--------CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-S--EEE
T ss_pred hHHHHHHHHHHhcc--------CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-C--ceE
Confidence 35666666655321 2457999999999999999988877 5899999999999999999998775 3 689
Q ss_pred EEEcCCC
Q 016734 171 IRKVDNS 177 (384)
Q Consensus 171 ~~~~d~~ 177 (384)
++.+|..
T Consensus 76 ~~~~d~~ 82 (284)
T 3gu3_A 76 FLEGDAT 82 (284)
T ss_dssp EEESCTT
T ss_pred EEEcchh
Confidence 9888743
No 97
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.21 E-value=3.7e-10 Score=121.36 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=63.1
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-------------------------------
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL------------------------------- 137 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~------------------------------- 137 (384)
|-++++...+..+..- .....+||.+||||.+.+.++...
T Consensus 173 pl~e~LAa~ll~~~~~---------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~e 243 (703)
T 3v97_A 173 PIKETLAAAIVMRSGW---------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 243 (703)
T ss_dssp SSCHHHHHHHHHHTTC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC---------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHH
Confidence 7788877776665432 134579999999999988766532
Q ss_pred -----------cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 138 -----------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 138 -----------~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+..+++|+|+|+.|++.|+.|++.++ +.+.|.+.++|..
T Consensus 244 a~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~ag-v~~~i~~~~~D~~ 293 (703)
T 3v97_A 244 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAG-IGELITFEVKDVA 293 (703)
T ss_dssp HHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEECCGG
T ss_pred HHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChh
Confidence 23589999999999999999999998 8888999998853
No 98
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.20 E-value=1.1e-09 Score=103.85 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=60.3
Q ss_pred HHHHHHHHHHh----ccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 92 SNYIHWIEDLL----SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 92 ~~yi~~i~dll----~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
...+.++.+.+ .. ....+|||||||+|.+...++... +.+++|+|+++.+++.|++++...+ +.+
T Consensus 64 ~~~~~~l~~~l~~~~~~---------~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~ 132 (297)
T 2o57_A 64 LRTDEWLASELAMTGVL---------QRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG-LAD 132 (297)
T ss_dssp HHHHHHHHHHHHHTTCC---------CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT-CTT
T ss_pred HHHHHHHHHHhhhccCC---------CCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC-CCc
Confidence 44556666666 21 234689999999999998888765 6799999999999999999999887 777
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
++.++.+|.
T Consensus 133 ~~~~~~~d~ 141 (297)
T 2o57_A 133 NITVKYGSF 141 (297)
T ss_dssp TEEEEECCT
T ss_pred ceEEEEcCc
Confidence 899998874
No 99
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.19 E-value=9.8e-10 Score=102.16 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=49.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...|+... .+++|+|+++.+++.|++++..++ +. ++.++.+|.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-~~-~v~~~~~d~ 94 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG-HQ-QVEYVQGDA 94 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC-CC-ceEEEEecH
Confidence 35689999999999988887654 499999999999999999999886 54 689988874
No 100
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.19 E-value=4.9e-10 Score=103.49 Aligned_cols=58 Identities=22% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..++... +.+++|+|+|+.+++.|++++... .++.++.+|..
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~ 112 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDIL 112 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccc
Confidence 35699999999999999998776 789999999999999999887543 46999988753
No 101
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.19 E-value=5.1e-10 Score=107.56 Aligned_cols=61 Identities=11% Similarity=0.177 Sum_probs=54.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..++... +.+|+|+|+++.+++.|++|++.++ +.+++.++.+|..
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNML 177 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChh
Confidence 35689999999999998888765 7899999999999999999999998 8888999998853
No 102
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.19 E-value=2.6e-10 Score=105.29 Aligned_cols=60 Identities=10% Similarity=0.116 Sum_probs=55.0
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...++.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNA 131 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 458999999999999999987778999999999999999999999998 888899999874
No 103
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.17 E-value=2.2e-10 Score=111.45 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=99.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|..+..|+...+ ..+|+|+|+++.+++.|++|+++++ +. +|.++.+|..+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~--------------- 180 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-VL-NVILFHSSSLH--------------- 180 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-CC-SEEEESSCGGG---------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-CC-eEEEEECChhh---------------
Confidence 346899999999999999998764 4799999999999999999999987 65 48888776321
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+.. ..++||+|+||||+....... ..|.....-+...+
T Consensus 181 --------------------------------------~~~---~~~~fD~Il~d~Pcsg~g~~~-~~p~~~~~~~~~~~ 218 (315)
T 1ixk_A 181 --------------------------------------IGE---LNVEFDKILLDAPCTGSGTIH-KNPERKWNRTMDDI 218 (315)
T ss_dssp --------------------------------------GGG---GCCCEEEEEEECCTTSTTTCC---------CCHHHH
T ss_pred --------------------------------------ccc---ccccCCEEEEeCCCCCccccc-CChhHhhcCCHHHH
Confidence 000 145799999999986543211 12211100000000
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEE---EecCCCCHHHHHHHHHHcCCeE
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVGVTI 324 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~---~vgk~~~l~~l~~~L~~~g~~~ 324 (384)
..-......+++++..+++.+|.+.. .+...++...+...|++.++..
T Consensus 219 ---~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 219 ---KFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp ---HHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred ---HHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 00134456788888888888886533 3555667777788888887643
No 104
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=6e-10 Score=97.58 Aligned_cols=127 Identities=15% Similarity=0.138 Sum_probs=90.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|+++.. ++.++.+|..+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~-------~~~~~~~d~~~----------------- 100 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP-------EARWVVGDLSV----------------- 100 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTT-----------------
T ss_pred CCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC-------CCcEEEccccc-----------------
Confidence 458999999999998888765 6799999999999999998752 36777776431
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+ .+ ..++||+|+|||+.+.....
T Consensus 101 -----------------------------------~--~~--~~~~~D~i~~~~~~~~~~~~------------------ 123 (195)
T 3cgg_A 101 -----------------------------------D--QI--SETDFDLIVSAGNVMGFLAE------------------ 123 (195)
T ss_dssp -----------------------------------S--CC--CCCCEEEEEECCCCGGGSCH------------------
T ss_pred -----------------------------------C--CC--CCCceeEEEECCcHHhhcCh------------------
Confidence 0 00 24679999999876643210
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCC--CCHHHHHHHHHHcCCeEEEEEEe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~--~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
.-...++++...+++.+|.+....+.. .+...+.+.|++.|+..+.+...
T Consensus 124 -----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 124 -----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred -----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 012455566667777788766555433 36899999999999986665443
No 105
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.17 E-value=5.4e-10 Score=102.01 Aligned_cols=75 Identities=5% Similarity=0.038 Sum_probs=62.8
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|....++.++.... ...+|||||||+|..+..++...+ +.+|+|+|+++.+++.|++|++.++ +.+
T Consensus 44 ~~~~~~l~~l~~~~------------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~ 110 (221)
T 3u81_A 44 DAKGQIMDAVIREY------------SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQD 110 (221)
T ss_dssp HHHHHHHHHHHHHH------------CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGG
T ss_pred HHHHHHHHHHHHhc------------CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCC
Confidence 56666666655443 245899999999999999988764 7899999999999999999999998 888
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 111 ~v~~~~~d~ 119 (221)
T 3u81_A 111 KVTILNGAS 119 (221)
T ss_dssp GEEEEESCH
T ss_pred ceEEEECCH
Confidence 899999874
No 106
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.17 E-value=1.3e-09 Score=102.77 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=51.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
...+|||||||+|.++..++... +.+|+|+|+|+.+++.|++++...+ +.+++.++.+|
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d 122 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAG 122 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESC
T ss_pred CcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECC
Confidence 34689999999999988888665 5699999999999999999999887 77789998876
No 107
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.16 E-value=1.1e-10 Score=115.84 Aligned_cols=88 Identities=11% Similarity=0.175 Sum_probs=68.1
Q ss_pred cEEEecCCCccCCCcC-HHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHH
Q 016734 75 LNWWIPDGQLCPTVPN-RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (384)
Q Consensus 75 l~~~vp~~~LiPrvP~-r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~ 153 (384)
+.|.++++.+....|. .+.++.|+.+.+.. ...+|||+|||+|.+++.|+.. ..+|+|+|+++.|++
T Consensus 182 ~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~----------~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~ 249 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAAMNIQMLEWALDVTKG----------SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVA 249 (369)
T ss_dssp CEEEEETTSCCCSBHHHHHHHHHHHHHHTTT----------CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHH
T ss_pred EEEEECCCCeecCCHHHHHHHHHHHHHHhhc----------CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHH
Confidence 4566667666655333 36677778777642 2357999999999999888753 459999999999999
Q ss_pred HHHHHHHHCCCCCCceEEEEcCC
Q 016734 154 WAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 154 ~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.|++|++.|+ +. +++++.+|.
T Consensus 250 ~a~~n~~~ng-~~-~v~~~~~d~ 270 (369)
T 3bt7_A 250 AAQYNIAANH-ID-NVQIIRMAA 270 (369)
T ss_dssp HHHHHHHHTT-CC-SEEEECCCS
T ss_pred HHHHHHHHcC-CC-ceEEEECCH
Confidence 9999999998 64 799998874
No 108
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.16 E-value=1.4e-09 Score=99.33 Aligned_cols=54 Identities=22% Similarity=0.320 Sum_probs=46.7
Q ss_pred CeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+|||||||+|.++..++.. .+++|+|+++.+++.|++++..++ .++.++.+|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 88 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDM 88 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCG
T ss_pred CeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcCh
Confidence 68999999999998887765 799999999999999999998775 3588888763
No 109
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.16 E-value=3.4e-10 Score=104.25 Aligned_cols=133 Identities=10% Similarity=0.014 Sum_probs=92.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|.++..|+... ..+++|+|+++.+++.|++++..++ ..++.++.+|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~---------------- 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQD---------------- 139 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGG----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhh----------------
Confidence 35699999999999988877665 5699999999999999999987763 2358888776321
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+...+++||+|+|+-.+..-.+
T Consensus 140 ----------------------------------------~~~~~~~fD~v~~~~~l~~~~~------------------ 161 (241)
T 2ex4_A 140 ----------------------------------------FTPEPDSYDVIWIQWVIGHLTD------------------ 161 (241)
T ss_dssp ----------------------------------------CCCCSSCEEEEEEESCGGGSCH------------------
T ss_pred ----------------------------------------cCCCCCCEEEEEEcchhhhCCH------------------
Confidence 0012458999999843321100
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEe-cC-------------CCCHHHHHHHHHHcCCeEEEEEEe
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV-GR-------------KSNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v-gk-------------~~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
.-+..++++..++++.+|++.+.. .. ..+.+++.++|+++|+..+.+...
T Consensus 162 ------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 162 ------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp ------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred ------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 013455666677777777764421 10 116899999999999987776543
No 110
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.16 E-value=2.1e-10 Score=104.28 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=62.9
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|....++.++.... ...+|||||||+|..+..++...+ +.+++|+|+++.+++.|+++++.++ +.+
T Consensus 50 ~~~~~~l~~l~~~~------------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~ 116 (225)
T 3tr6_A 50 PEQAQLLALLVKLM------------QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG-LSD 116 (225)
T ss_dssp HHHHHHHHHHHHHH------------TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT-CTT
T ss_pred HHHHHHHHHHHHhh------------CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCC
Confidence 55666666655543 235899999999999999998877 7899999999999999999999998 888
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 117 ~v~~~~~d~ 125 (225)
T 3tr6_A 117 KIGLRLSPA 125 (225)
T ss_dssp TEEEEESCH
T ss_pred ceEEEeCCH
Confidence 899998874
No 111
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.16 E-value=7.3e-10 Score=106.33 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=52.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++... +++|+|+|+|+.+++.|++++...+ +.+++.++.+|.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 149 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQGW 149 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCG
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCh
Confidence 34689999999999998888765 7799999999999999999999887 777899988763
No 112
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.16 E-value=1.4e-09 Score=99.94 Aligned_cols=59 Identities=10% Similarity=-0.099 Sum_probs=50.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||+|||+|.++..|+...+..+|+|+|+++.+++.|++|++.+ .++.++.+|..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~ 132 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDAN 132 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTT
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCC
Confidence 346899999999999999988766679999999999999999998655 36888888743
No 113
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=110.90 Aligned_cols=49 Identities=14% Similarity=0.159 Sum_probs=42.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~ 163 (384)
...+|||||||+|.+...|+..+++.+|+|+|+|+.+++.|++++..++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhh
Confidence 3568999999999999999998888999999999999999999987653
No 114
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.15 E-value=5.8e-10 Score=102.47 Aligned_cols=58 Identities=9% Similarity=-0.076 Sum_probs=49.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||+|||+|.++..|+... ++.+|+|+|+++.+++.+.++++.+. ++.++.+|..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~----~v~~~~~d~~ 136 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT----NIIPVIEDAR 136 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCT----TEEEECSCTT
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccC----CeEEEEcccC
Confidence 4589999999999999998876 56899999999999999999988763 5888887743
No 115
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.14 E-value=7.6e-10 Score=100.57 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=55.0
Q ss_pred CCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...+ +.+++|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 119 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLA 119 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 46899999999999999998877 7899999999999999999999998 888899999874
No 116
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.14 E-value=3e-10 Score=115.41 Aligned_cols=61 Identities=16% Similarity=0.023 Sum_probs=49.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-------------cCCEEEEEeCcHHHHHHHHHHHHHCCCCCC-ceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVKSNPHISE-LIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-------------~~~~v~gvDid~~al~~A~~Ni~~n~~l~~-~I~~~~~d~ 176 (384)
...+|||+|||||.+.+.++... ...+++|+|+++.+++.|+.|+..++ +.. .+.++++|.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~gD~ 245 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCEDS 245 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEECCT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeCCC
Confidence 34589999999999987777653 34689999999999999999999887 542 567777764
No 117
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=1.4e-09 Score=96.98 Aligned_cols=132 Identities=9% Similarity=-0.024 Sum_probs=91.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.+...|+.. +.+++|+|+++.+++.|+++. .++.++.+|..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~----------------- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-------PSVTFHHGTITD----------------- 95 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGG-----------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccc-----------------
Confidence 458999999999998888765 679999999999999999872 147777766321
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+...+++||+|+|+-.+..... +
T Consensus 96 ---------------------------------------~~~~~~~fD~v~~~~~l~~~~~-------------~----- 118 (203)
T 3h2b_A 96 ---------------------------------------LSDSPKRWAGLLAWYSLIHMGP-------------G----- 118 (203)
T ss_dssp ---------------------------------------GGGSCCCEEEEEEESSSTTCCT-------------T-----
T ss_pred ---------------------------------------cccCCCCeEEEEehhhHhcCCH-------------H-----
Confidence 0113578999999864442110 0
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCC---------------CCHHHHHHHHHHcCCeEEEEEEeeCCCeeE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK---------------SNLKFLISKLRKVGVTIVKTTEFVQGQTCR 337 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~---------------~~l~~l~~~L~~~g~~~v~~~e~~qG~t~R 337 (384)
-...++++..++++.+|++....... -+.+++.++|++.|++.+.+... .+....
T Consensus 119 ------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~p~~ 188 (203)
T 3h2b_A 119 ------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD-PRFPHA 188 (203)
T ss_dssp ------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC-TTSSEE
T ss_pred ------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec-CCCcch
Confidence 13455566667778888765443211 35899999999999987666554 344343
No 118
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=2.2e-10 Score=116.27 Aligned_cols=88 Identities=20% Similarity=0.299 Sum_probs=71.9
Q ss_pred cCCcEEEecCCCccCCC-cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 72 DHGLNWWIPDGQLCPTV-PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrv-P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
..|+.|.++++.+.... ..++.++.++.+ +. ...+|||+|||+|.+++.|+.. +.+|+|+|+++.
T Consensus 258 ~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~-~~-----------~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ 323 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSYQAVNLVRKVSE-LV-----------EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEF 323 (425)
T ss_dssp ETTEEEEECTTSCCCSBHHHHHHHHHHHHH-HC-----------CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHH
T ss_pred ECCEEEEEccccccccCHHHHHHHHHHhhc-cC-----------CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHH
Confidence 46899999999887542 345667777776 32 2458999999999999988864 569999999999
Q ss_pred HHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 151 al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
|++.|++|++.|+ +. ++++.+|.
T Consensus 324 ai~~A~~n~~~ng-l~--v~~~~~d~ 346 (425)
T 2jjq_A 324 AIEMARRNVEINN-VD--AEFEVASD 346 (425)
T ss_dssp HHHHHHHHHHHHT-CC--EEEEECCT
T ss_pred HHHHHHHHHHHcC-Cc--EEEEECCh
Confidence 9999999999997 65 89998874
No 119
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.13 E-value=1.5e-09 Score=102.36 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=49.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|.++..|+.. +.+|+|+|+|+.+++.|++++..++ + ++.++.+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 176 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKEN-L--NISTALYDI 176 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CEEEEECCG
T ss_pred CCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcC-C--ceEEEEecc
Confidence 468999999999999888866 6799999999999999999999987 5 689988874
No 120
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=6e-10 Score=104.71 Aligned_cols=130 Identities=13% Similarity=0.089 Sum_probs=97.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHC-CCCCCceEEEEcCCCCCCCcccccccCCcc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSV 192 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n-~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~ 192 (384)
...+|||+|||+|.++..++... ++.+++|+|+++.+++.|++|++.+ +.+.+++.++.+|..+
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-------------- 164 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-------------- 164 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG--------------
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh--------------
Confidence 34589999999999998888754 5789999999999999999999876 3245678888776421
Q ss_pred ccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccc
Q 016734 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (384)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E 272 (384)
. .+ .++.||+|+||+|- |.
T Consensus 165 --------------------------------------~--~~--~~~~~D~v~~~~~~----------~~--------- 183 (280)
T 1i9g_A 165 --------------------------------------S--EL--PDGSVDRAVLDMLA----------PW--------- 183 (280)
T ss_dssp --------------------------------------C--CC--CTTCEEEEEEESSC----------GG---------
T ss_pred --------------------------------------c--CC--CCCceeEEEECCcC----------HH---------
Confidence 0 00 24579999998761 10
Q ss_pred ccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHH-cCCeEEEEEEee
Q 016734 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK-VGVTIVKTTEFV 331 (384)
Q Consensus 273 ~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~-~g~~~v~~~e~~ 331 (384)
.++++..++++.+|++.+......++..+.+.|++ .++..+++.+..
T Consensus 184 ------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~~~~ 231 (280)
T 1i9g_A 184 ------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETL 231 (280)
T ss_dssp ------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEEECCC
T ss_pred ------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEEEEEe
Confidence 22455566778888887777766778888888887 788777776654
No 121
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.13 E-value=5.6e-10 Score=106.09 Aligned_cols=145 Identities=12% Similarity=0.039 Sum_probs=94.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhccC-CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~-~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|..+..++...++ .+|+|+|+++.+++.|++|++.++ +. ++.++.+|..+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~--------------- 145 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-VL-NTIIINADMRK--------------- 145 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEESCHHH---------------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-CC-cEEEEeCChHh---------------
Confidence 3458999999999999999987766 799999999999999999999997 65 68998887321
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+...+....++||+|+|||||....... ..|... ...+
T Consensus 146 -------------------------------------~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~-~~p~~~----~~~~ 183 (274)
T 3ajd_A 146 -------------------------------------YKDYLLKNEIFFDKILLDAPCSGNIIKD-KNRNVS----EEDI 183 (274)
T ss_dssp -------------------------------------HHHHHHHTTCCEEEEEEEECCC-----------------HHHH
T ss_pred -------------------------------------cchhhhhccccCCEEEEcCCCCCCcccc-cCCCCC----HHHH
Confidence 0000000246799999999997643211 112100 0000
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEE---EecCCCCHHHHHHHHHHcC
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVG 321 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~---~vgk~~~l~~l~~~L~~~g 321 (384)
. .-.....++++++..+++.+|.+.. -+...++-..+...|+++.
T Consensus 184 -~--~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 184 -K--YCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp -T--GGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred -H--HHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC
Confidence 0 0023456778888888888886533 3444566666777776653
No 122
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.13 E-value=1.2e-09 Score=99.73 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~ 171 (384)
...+.++...+. ...+|||||||+|.++..++.. +.+++|+|+++.+++.|+++.. ..++.+
T Consensus 41 ~~~~~~l~~~~~-----------~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~ 102 (242)
T 3l8d_A 41 STIIPFFEQYVK-----------KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE-----GPDLSF 102 (242)
T ss_dssp TTHHHHHHHHSC-----------TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC-----BTTEEE
T ss_pred HHHHHHHHHHcC-----------CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc-----cCCceE
Confidence 345556665543 2458999999999998888765 7799999999999999988752 246889
Q ss_pred EEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCc
Q 016734 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251 (384)
Q Consensus 172 ~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy 251 (384)
+.+|..+ + ...+++||+|+|+-.+
T Consensus 103 ~~~d~~~-----------------------------------------------------~---~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 103 IKGDLSS-----------------------------------------------------L---PFENEQFEAIMAINSL 126 (242)
T ss_dssp EECBTTB-----------------------------------------------------C---SSCTTCEEEEEEESCT
T ss_pred EEcchhc-----------------------------------------------------C---CCCCCCccEEEEcChH
Confidence 8887431 0 0025789999998655
Q ss_pred ccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEe-c--------------------CCCCH
Q 016734 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV-G--------------------RKSNL 310 (384)
Q Consensus 252 ~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v-g--------------------k~~~l 310 (384)
....+ ...++++..++++++|++.... + ..-+.
T Consensus 127 ~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (242)
T 3l8d_A 127 EWTEE--------------------------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMP 180 (242)
T ss_dssp TSSSC--------------------------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCH
T ss_pred hhccC--------------------------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCH
Confidence 43210 1244555566667777654433 1 11345
Q ss_pred HHHHHHHHHcCCeEEEEEEeeCC
Q 016734 311 KFLISKLRKVGVTIVKTTEFVQG 333 (384)
Q Consensus 311 ~~l~~~L~~~g~~~v~~~e~~qG 333 (384)
.++.++|+++|++.+.+..+..+
T Consensus 181 ~~~~~~l~~~Gf~~~~~~~~~~~ 203 (242)
T 3l8d_A 181 WEFEQLVKEQGFKVVDGIGVYKR 203 (242)
T ss_dssp HHHHHHHHHTTEEEEEEEEEECT
T ss_pred HHHHHHHHHcCCEEEEeeccccc
Confidence 78999999999998887766544
No 123
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.13 E-value=2.9e-10 Score=116.76 Aligned_cols=145 Identities=10% Similarity=0.029 Sum_probs=101.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccC-CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~-~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|..+..|+...++ .+|+|+|+|+.+++.|++|+++++ +. |.++.+|..+
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~~--v~~~~~Da~~--------------- 162 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-AP--LAVTQAPPRA--------------- 162 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-CC--CEEECSCHHH---------------
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-Ce--EEEEECCHHH---------------
Confidence 3568999999999999999988764 699999999999999999999998 65 8887766321
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+... ..++||+|+||||+....... ..|.....-+...+
T Consensus 163 --------------------------------------l~~~--~~~~FD~Il~D~PcSg~G~~r-r~pd~~~~~~~~~~ 201 (464)
T 3m6w_A 163 --------------------------------------LAEA--FGTYFHRVLLDAPCSGEGMFR-KDREAARHWGPSAP 201 (464)
T ss_dssp --------------------------------------HHHH--HCSCEEEEEEECCCCCGGGTT-TCTTSGGGCCTTHH
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCcCCccccc-cChHHhhhcCHHHH
Confidence 1100 146899999999997543221 23332211111100
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEE---EEecCCCCHHHHHHHHHHcC
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVG 321 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t---~~vgk~~~l~~l~~~L~~~g 321 (384)
. .-.....++++++..+++.+|.+. |-+...++-+.+...|++++
T Consensus 202 ~---~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 202 K---RMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 (464)
T ss_dssp H---HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred H---HHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC
Confidence 0 012445778999999988888653 45566677888888888873
No 124
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.12 E-value=5.5e-10 Score=102.48 Aligned_cols=60 Identities=22% Similarity=0.169 Sum_probs=54.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...++.+|+|+|+++.+++.|++|++.++ +.++|.++.+|.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 114 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDA 114 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 458999999999999999988888999999999999999999999997 777899988763
No 125
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.12 E-value=8.3e-10 Score=102.08 Aligned_cols=56 Identities=14% Similarity=0.168 Sum_probs=46.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++...+. +++|+|+++.+++.|++++. ..++.++.+|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~ 99 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAI 99 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC-----CTTEEEEECCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc-----cCCeEEEEcch
Confidence 4579999999999998888876433 99999999999999999875 23688888874
No 126
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.12 E-value=6.9e-10 Score=105.98 Aligned_cols=136 Identities=10% Similarity=0.115 Sum_probs=92.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH--CCCC-CCceEEEEcCCCCCCCcccccccCCc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKS 191 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~--n~~l-~~~I~~~~~d~~~~~p~~~~~~~~~~ 191 (384)
.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++|+.. ++ + .++++++.+|..+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~------------- 140 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFM------------- 140 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHH-------------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHH-------------
Confidence 35689999999999988887654567999999999999999999854 23 3 4589999887421
Q ss_pred cccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcc
Q 016734 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPE 271 (384)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~ 271 (384)
.+ ....++||+|+||+|+... |. .
T Consensus 141 ---------------------------------------~l---~~~~~~fD~Ii~d~~~~~~-------~~-------~ 164 (275)
T 1iy9_A 141 ---------------------------------------HI---AKSENQYDVIMVDSTEPVG-------PA-------V 164 (275)
T ss_dssp ---------------------------------------HH---HTCCSCEEEEEESCSSCCS-------CC-------C
T ss_pred ---------------------------------------HH---hhCCCCeeEEEECCCCCCC-------cc-------h
Confidence 11 1124689999999986321 10 0
Q ss_pred cccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC----CCHHHHHHHHHHcCCeEEEEEE
Q 016734 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 272 E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~----~~l~~l~~~L~~~g~~~v~~~e 329 (384)
.+ +...++++..+.++.+|++.+..+.. ..+..+.+.|++. |..+....
T Consensus 165 ~l--------~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 217 (275)
T 1iy9_A 165 NL--------FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKLYT 217 (275)
T ss_dssp CC--------STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred hh--------hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEEEE
Confidence 00 11233445567788999988776532 2256667777776 55566543
No 127
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.12 E-value=1.6e-09 Score=104.48 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=55.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||+|||+|.++..++..+++.+++++|++ .+++.|++++..++ +.++|+++.+|..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 225 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSAF 225 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCTT
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEecccc
Confidence 3569999999999999999988899999999999 99999999999887 7788999998753
No 128
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.11 E-value=8.6e-10 Score=102.56 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=53.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC--------CCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--------PHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n--------~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..++...+.++|+|+|+++.+++.|++|++.+ + +. ++.++.+|..
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~-nv~~~~~D~~ 117 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-FQ-NINVLRGNAM 117 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-TT-TEEEEECCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-CC-cEEEEeccHH
Confidence 346899999999999999998888899999999999999999999876 5 43 6999988753
No 129
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.11 E-value=1.9e-09 Score=99.24 Aligned_cols=130 Identities=12% Similarity=0.019 Sum_probs=91.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|.++..|+... ..+++|+|+++.+++.|++++..+ .++.++.+|..+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~---------------- 151 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMET---------------- 151 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGG----------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHH----------------
Confidence 45699999999999998888765 568999999999999999987654 368888876421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+ .+ ..++||+|+|+-.+..-..
T Consensus 152 -------------------------------------~-~~--~~~~fD~v~~~~~l~~~~~------------------ 173 (254)
T 1xtp_A 152 -------------------------------------A-TL--PPNTYDLIVIQWTAIYLTD------------------ 173 (254)
T ss_dssp -------------------------------------C-CC--CSSCEEEEEEESCGGGSCH------------------
T ss_pred -------------------------------------C-CC--CCCCeEEEEEcchhhhCCH------------------
Confidence 0 00 2468999999865432110
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEec---------------CCCCHHHHHHHHHHcCCeEEEEEE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVG---------------RKSNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg---------------k~~~l~~l~~~L~~~g~~~v~~~e 329 (384)
.-...++++..++++.+|++..... ...+.+.+.++|+++|+..+++..
T Consensus 174 ------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 174 ------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp ------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred ------HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 1134555666667777776644331 012568999999999998777654
No 130
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.11 E-value=9.8e-10 Score=102.68 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHH------HHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDV------ALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~------al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
...+|||||||+|.++..++... +..+++|+|+++. +++.|+++++.++ +.++|.++.+|
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~~d 109 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHFNT 109 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEECSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEECC
Confidence 34689999999999999998875 6689999999997 9999999999887 77789998876
No 131
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.11 E-value=3.2e-10 Score=110.72 Aligned_cols=170 Identities=15% Similarity=0.045 Sum_probs=107.5
Q ss_pred cCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
.||..+.+...+.+++ +....|-+.+..+..... ..+.+|||||||+|.++..++...+..+++++|+|+.+
T Consensus 73 ~~g~~l~ldg~~q~~~-~de~~Y~e~l~~l~l~~~-------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 144 (314)
T 2b2c_A 73 TYGNVLVLDGIVQATE-RDEFSYQEMLAHLPMFAH-------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMV 144 (314)
T ss_dssp TTEEEEEETTEEEEES-SSSSHHHHHHHHHHHHHS-------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHH
T ss_pred CCCEEEEECCEeecCC-cchhHHHHHHHHHHHhhC-------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHH
Confidence 5777778877777777 554444333332211110 13468999999999999888876667899999999999
Q ss_pred HHHHHHHHHHC--CCC-CCceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCC
Q 016734 152 LEWAEKNVKSN--PHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (384)
Q Consensus 152 l~~A~~Ni~~n--~~l-~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 228 (384)
++.|++|+... + + .++++++.+|..+
T Consensus 145 i~~Ar~~~~~~~~~-~~~~rv~~~~~D~~~-------------------------------------------------- 173 (314)
T 2b2c_A 145 IDVAKKFLPGMSCG-FSHPKLDLFCGDGFE-------------------------------------------------- 173 (314)
T ss_dssp HHHHHHHCTTTSGG-GGCTTEEEECSCHHH--------------------------------------------------
T ss_pred HHHHHHHHHHhccc-cCCCCEEEEEChHHH--------------------------------------------------
Confidence 99999998653 2 3 4578888776321
Q ss_pred CCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCC
Q 016734 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308 (384)
Q Consensus 229 ~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~ 308 (384)
.+ ....++||+|+||+|..- .| . +-.+...+++++.+.++.+|++.+..|...
T Consensus 174 --~l---~~~~~~fD~Ii~d~~~~~-------~~-------~--------~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 174 --FL---KNHKNEFDVIITDSSDPV-------GP-------A--------ESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp --HH---HHCTTCEEEEEECCC-----------------------------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred --HH---HhcCCCceEEEEcCCCCC-------Cc-------c--------hhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 01 112468999999985210 01 0 001225566677788899999988766322
Q ss_pred ----CHHHHHHHHHHcCCeEEEEE
Q 016734 309 ----NLKFLISKLRKVGVTIVKTT 328 (384)
Q Consensus 309 ----~l~~l~~~L~~~g~~~v~~~ 328 (384)
....+.+.+++. |..+...
T Consensus 227 ~~~~~~~~~~~~l~~v-F~~v~~~ 249 (314)
T 2b2c_A 227 LHLPLIAHLVAFNRKI-FPAVTYA 249 (314)
T ss_dssp TCHHHHHHHHHHHHHH-CSEEEEE
T ss_pred cCHHHHHHHHHHHHHH-CCcceEE
Confidence 244556666665 4455543
No 132
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.11 E-value=2.3e-09 Score=105.15 Aligned_cols=60 Identities=10% Similarity=0.096 Sum_probs=55.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++...++++++++|+ +.+++.|++++..++ +.++|+++.+|.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 241 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDF 241 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 456999999999999999999889999999999 999999999999987 788899998874
No 133
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.10 E-value=9.5e-10 Score=107.99 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=51.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..++.. ...+|+|+|+++ +++.|+++++.++ +.++|+++.+|..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~-~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK-LEDTITLIKGKIE 123 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC-CCCcEEEEEeeHH
Confidence 3468999999999998887765 345999999997 9999999999998 8889999998753
No 134
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.10 E-value=4.8e-10 Score=102.16 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=61.5
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|....++..+..+. ...+|||||||+|..+..++...+ +.+++++|+++.+++.|++|++.++ +.+
T Consensus 55 ~~~~~~l~~l~~~~------------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~ 121 (229)
T 2avd_A 55 CEQAQLLANLARLI------------QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE-AEH 121 (229)
T ss_dssp HHHHHHHHHHHHHT------------TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-CTT
T ss_pred HHHHHHHHHHHHhc------------CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCC
Confidence 55555665554432 245899999999999999988776 7899999999999999999999998 778
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 122 ~i~~~~~d~ 130 (229)
T 2avd_A 122 KIDLRLKPA 130 (229)
T ss_dssp TEEEEESCH
T ss_pred eEEEEEcCH
Confidence 899998873
No 135
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.10 E-value=1.3e-09 Score=101.48 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=44.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|+++.. ++.++.+|..
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~~ 103 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP-------DAVLHHGDMR 103 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT-------TSEEEECCTT
T ss_pred CCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC-------CCEEEECChH
Confidence 468999999999998888765 5699999999999999998743 4788888743
No 136
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.09 E-value=1.8e-09 Score=101.49 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=51.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+...++.. +..+++|+|+++.+++.|++++...+ +..++.++.+|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 124 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFRAQDSY 124 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEEESCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEEECCcc
Confidence 3468999999999888777654 44599999999999999999999886 6678999988753
No 137
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=1.2e-09 Score=102.06 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=55.1
Q ss_pred CCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...+ +.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 124 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPA 124 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 46899999999999999998887 7899999999999999999999998 888999999874
No 138
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.08 E-value=7.4e-09 Score=94.38 Aligned_cols=59 Identities=10% Similarity=-0.010 Sum_probs=50.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||+|||+|.++..++... ++.+|+|+|+++.+++.|++|++.+ .++.++.+|..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~ 132 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDAT 132 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCC
Confidence 34589999999999999998775 4579999999999999999999765 36999988753
No 139
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.08 E-value=7.9e-10 Score=99.87 Aligned_cols=156 Identities=12% Similarity=0.039 Sum_probs=101.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||+|||+|.++..++.+ +.+|+|+|+++.+ . + .++.++++|..+....
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~-~-~~v~~~~~D~~~~~~~------------ 77 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E-I-AGVRFIRCDIFKETIF------------ 77 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C-C-TTCEEEECCTTSSSHH------------
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c-C-CCeEEEEccccCHHHH------------
Confidence 3468999999999999888766 7899999999741 1 2 3588999886430000
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCccccccc--CCCcEEEEEECCCcccchhhhccCCccccCCCccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR--DGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~--~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E 272 (384)
..+..... ..++||+|+||+|...+.... .+.
T Consensus 78 -----------------------------------~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~-----------~d~ 111 (191)
T 3dou_A 78 -----------------------------------DDIDRALREEGIEKVDDVVSDAMAKVSGIPS-----------RDH 111 (191)
T ss_dssp -----------------------------------HHHHHHHHHHTCSSEEEEEECCCCCCCSCHH-----------HHH
T ss_pred -----------------------------------HHHHHHhhcccCCcceEEecCCCcCCCCCcc-----------cCH
Confidence 00000010 013899999998653321100 000
Q ss_pred ccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC---eeEEEEEEecCCcc
Q 016734 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSFVPPA 348 (384)
Q Consensus 273 ~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~~AWsf~~~~ 348 (384)
......+..+++.+.++++++|+|.+.+-.......+.+.|+. .|..|++.+...++ ...++||-.|..++
T Consensus 112 ----~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~~~~~~~ 185 (191)
T 3dou_A 112 ----AVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFFGFKAEG 185 (191)
T ss_dssp ----HHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEEEEECC------CCEEEEEEEEECCC-
T ss_pred ----HHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEeeecccc
Confidence 0024556778888889999999998877766667788888865 47888887776665 47889998887764
No 140
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.08 E-value=1e-09 Score=98.67 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=37.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~N 158 (384)
+.+|||||||+|.+...++.. +++++|+|+++.+++.|+++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh
Confidence 469999999999998888765 77999999999999999887
No 141
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.08 E-value=3.4e-09 Score=97.65 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++... .+++|+|+++.+++.|++++..++ +. ++.++.+|.
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 78 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG-VE-NVRFQQGTA 78 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT-CC-SEEEEECBT
T ss_pred CCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC-CC-CeEEEeccc
Confidence 45689999999999988887654 499999999999999999998886 54 688888874
No 142
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.08 E-value=7.1e-10 Score=110.35 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++.. ...+|+|+|++ .+++.|+++++.++ +.++|+++.+|.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~ 121 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSV 121 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECch
Confidence 4568999999999998888765 22399999999 99999999999998 888999999874
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.08 E-value=8.7e-10 Score=108.58 Aligned_cols=59 Identities=19% Similarity=0.288 Sum_probs=51.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+|.++..++.. +..+|+|+|+++ +++.|+++++.++ +.++|+++.+|..
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~-~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK-LDHVVTIIKGKVE 125 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC-CCCcEEEEECcHH
Confidence 468999999999998888765 456999999995 9999999999998 8889999999854
No 144
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.08 E-value=1.1e-09 Score=98.85 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=62.5
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|.+..++.++.... ...+|||||||+|..+..++...+ +.+|+++|+|+.+++.|++|++.++ +.+
T Consensus 42 ~~~~~~l~~l~~~~------------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~ 108 (210)
T 3c3p_A 42 RQTGRLLYLLARIK------------QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG-LID 108 (210)
T ss_dssp HHHHHHHHHHHHHH------------CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS-GGG
T ss_pred HHHHHHHHHHHHhh------------CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCc
Confidence 66666666655433 235899999999999999988776 7899999999999999999999887 777
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 109 ~v~~~~~d~ 117 (210)
T 3c3p_A 109 RVELQVGDP 117 (210)
T ss_dssp GEEEEESCH
T ss_pred eEEEEEecH
Confidence 899998873
No 145
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.08 E-value=4.2e-09 Score=94.85 Aligned_cols=140 Identities=16% Similarity=0.126 Sum_probs=94.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||+|.++..++... .+++|+|+++.+++.|++++..++ ++.++.+|..+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~---------------- 108 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWS----HISWAATDILQ---------------- 108 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCS----SEEEEECCTTT----------------
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCC----CeEEEEcchhh----------------
Confidence 45689999999999988887653 599999999999999999987653 69999887532
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+ . ..++||+|+||..++.-.
T Consensus 109 ------------------------------------~----~-~~~~fD~v~~~~~l~~~~------------------- 128 (216)
T 3ofk_A 109 ------------------------------------F----S-TAELFDLIVVAEVLYYLE------------------- 128 (216)
T ss_dssp ------------------------------------C----C-CSCCEEEEEEESCGGGSS-------------------
T ss_pred ------------------------------------C----C-CCCCccEEEEccHHHhCC-------------------
Confidence 0 0 246899999996554321
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEe---------cCCCCHHHHHHHHHHcCCeEEEEEEeeCCC-eeEEEEE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEFVQGQ-TCRWGLA 341 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v---------gk~~~l~~l~~~L~~~g~~~v~~~e~~qG~-t~Rw~~A 341 (384)
...-+..++++..++++.+|++.+.. ......+.+...+.+. +..++..+...+. ...|+++
T Consensus 129 ----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~d~~l~ 200 (216)
T 3ofk_A 129 ----DMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEA-LTEVERVQCQGQSADEDCLLA 200 (216)
T ss_dssp ----SHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH-SEEEEEEEEECSSTTCEEEEE
T ss_pred ----CHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh-ccceEEEeccCCccccchhHH
Confidence 11224556677777888888876532 2334455666666543 4556655554333 3555554
No 146
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.08 E-value=1.2e-09 Score=106.50 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=50.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+|.++..++.. ...+|+|+|++ .+++.|+++++.++ +.++|+++.+|..
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKLE 97 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECchh
Confidence 458999999999998877764 44599999999 59999999999998 8889999998753
No 147
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.07 E-value=3e-10 Score=109.77 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=52.5
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEE
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~ 173 (384)
.+..+.+.+.. ....+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++|++.++ + ++++++.
T Consensus 30 i~~~i~~~~~~---------~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~~ 96 (299)
T 2h1r_A 30 ILDKIIYAAKI---------KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVYE 96 (299)
T ss_dssp HHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC--
T ss_pred HHHHHHHhcCC---------CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEE
Confidence 45556665532 13458999999999999888765 5799999999999999999998876 5 4688888
Q ss_pred cCC
Q 016734 174 VDN 176 (384)
Q Consensus 174 ~d~ 176 (384)
+|.
T Consensus 97 ~D~ 99 (299)
T 2h1r_A 97 GDA 99 (299)
T ss_dssp --C
T ss_pred Cch
Confidence 874
No 148
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.07 E-value=9.6e-10 Score=102.54 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=51.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH------CCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS------NPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~------n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...|+...+++.|+|+|+++.+++.|+++++. ++ + .+|.++.+|.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~-~-~nv~~~~~d~ 111 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG-F-QNIACLRSNA 111 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC-C-TTEEEEECCT
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC-C-CeEEEEECcH
Confidence 34689999999999999999888999999999999999999999864 33 3 4699998874
No 149
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=4.7e-10 Score=106.49 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=56.1
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
..+..+.+.+.. ....+|||||||+|.+...|+.+ +.+|+|+|+|+++++.|++++... ++++++
T Consensus 16 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~----~~v~~i 80 (255)
T 3tqs_A 16 FVLQKIVSAIHP---------QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQ----KNITIY 80 (255)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTC----TTEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhC----CCcEEE
Confidence 345566666643 23458999999999999888865 479999999999999999998652 369999
Q ss_pred EcCCCC
Q 016734 173 KVDNSE 178 (384)
Q Consensus 173 ~~d~~~ 178 (384)
++|..+
T Consensus 81 ~~D~~~ 86 (255)
T 3tqs_A 81 QNDALQ 86 (255)
T ss_dssp ESCTTT
T ss_pred EcchHh
Confidence 998653
No 150
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.07 E-value=3.3e-10 Score=116.04 Aligned_cols=148 Identities=15% Similarity=0.067 Sum_probs=102.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccC-CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~-~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|..+..++...++ .+|+|+|+|+.+++.+++|+++++ +. +|.++.+|..+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~~-nv~v~~~Da~~--------------- 167 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-VS-NAIVTNHAPAE--------------- 167 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-CS-SEEEECCCHHH---------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-ceEEEeCCHHH---------------
Confidence 3468999999999999999987664 699999999999999999999998 65 48887766321
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+... ..+.||+|+||||+....... .+|.....-+...+
T Consensus 168 --------------------------------------l~~~--~~~~FD~Il~DaPCSg~G~~r-r~p~~~~~~~~~~~ 206 (456)
T 3m4x_A 168 --------------------------------------LVPH--FSGFFDRIVVDAPCSGEGMFR-KDPNAIKEWTEESP 206 (456)
T ss_dssp --------------------------------------HHHH--HTTCEEEEEEECCCCCGGGTT-TCHHHHHHCCTTHH
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCCCCccccc-cCHHHhhhcCHHHH
Confidence 1100 146899999999986543211 12221110001000
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEE---EEEecCCCCHHHHHHHHHHcCCe
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWY---TSMVGRKSNLKFLISKLRKVGVT 323 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~---t~~vgk~~~l~~l~~~L~~~g~~ 323 (384)
. .-.....++++++..+++.+|.+ ||-+...++-..+...|+++++.
T Consensus 207 ~---~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 207 L---YCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp H---HHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred H---HHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 0 01245568899999898888865 34556677888888899998843
No 151
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.07 E-value=3.6e-09 Score=94.25 Aligned_cols=170 Identities=11% Similarity=0.010 Sum_probs=99.8
Q ss_pred CCeEEEECCcccHHHHHHHhhcc--CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL--GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~--~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
..+|||||||+|.++..++.+.+ +.+|+|+|+++.+ . + .++.++++|..+. . ...+.+|+++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~-~~v~~~~~d~~~~--~-~~~~~~~~~i 86 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-I-PNVYFIQGEIGKD--N-MNNIKNINYI 86 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-C-TTCEEEECCTTTT--S-SCCC------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-C-CCceEEEccccch--h-hhhhcccccc
Confidence 45899999999999999998877 6899999999831 1 2 3588888886531 1 1134455555
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
......... ..+...+ .+++||+|+||+++.-..... . +.+
T Consensus 87 ~~~~~~~~~--------------------------~~~~~~~--~~~~fD~v~~~~~~~~~g~~~-~---------d~~- 127 (201)
T 2plw_A 87 DNMNNNSVD--------------------------YKLKEIL--QDKKIDIILSDAAVPCIGNKI-D---------DHL- 127 (201)
T ss_dssp -----CHHH--------------------------HHHHHHH--TTCCEEEEEECCCCCCCSCHH-H---------HHH-
T ss_pred ccccchhhH--------------------------HHHHhhc--CCCcccEEEeCCCcCCCCCcc-c---------CHH-
Confidence 432110000 0000001 346899999998654321000 0 000
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC---eeEEEEEEecC
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSFV 345 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~~AWsf~ 345 (384)
........+++++.++++++|++.+.+....+..++...|+. .+..+.+.+...++ ..+|+|+--|.
T Consensus 128 ----~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v~~~~~~~~r~~s~e~y~v~~~~~ 197 (201)
T 2plw_A 128 ----NSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLVHTTKPKASRNESREIYLVCKNFL 197 (201)
T ss_dssp ----HHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEEEECCCC-----CCEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheEEEECCcccCCcCceEEEEEecCc
Confidence 012234567888888999999988766656778888888876 46777776666554 35777776654
No 152
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.06 E-value=3.7e-09 Score=96.40 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=45.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCC-EEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~-~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.. +. +++|+|+++.+++.|+++...+ ++.++.+|.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~d~ 98 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDT-----GITYERADL 98 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSS-----SEEEEECCG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccC-----CceEEEcCh
Confidence 3468999999999998888765 45 9999999999999999876432 588888763
No 153
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.05 E-value=1.3e-09 Score=112.26 Aligned_cols=143 Identities=10% Similarity=0.078 Sum_probs=99.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|..+..|+.... ..+|+|+|+++.+++.|++|+++++ +. +|.++++|..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~~-nv~~~~~D~~~--------------- 179 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-IS-NVALTHFDGRV--------------- 179 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-CC-SEEEECCCSTT---------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeCCHHH---------------
Confidence 346899999999999999998765 4799999999999999999999997 65 58888776421
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
+... ..+.||.|+||||+....... ..|.....
T Consensus 180 --------------------------------------~~~~--~~~~fD~Il~D~PcSg~G~~~-~~pd~~~~------ 212 (479)
T 2frx_A 180 --------------------------------------FGAA--VPEMFDAILLDAPCSGEGVVR-KDPDALKN------ 212 (479)
T ss_dssp --------------------------------------HHHH--STTCEEEEEEECCCCCGGGGG-TCTTSSSS------
T ss_pred --------------------------------------hhhh--ccccCCEEEECCCcCCccccc-CCHHHHhh------
Confidence 1110 246799999999997543221 12322110
Q ss_pred cccCc--h-HHHHHHHHHHHHHhhccCeEEE---EEecCCCCHHHHHHHHHHcC
Q 016734 274 VCSGG--E-RAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVG 321 (384)
Q Consensus 274 ~~~GG--e-l~Fv~~ii~eS~~l~~~~~w~t---~~vgk~~~l~~l~~~L~~~g 321 (384)
+.... + ..+..++++++..+++.+|.+. |.+...++-..+...|++++
T Consensus 213 ~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 213 WSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred cCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 11100 1 2345678899988888888653 34555667777777788776
No 154
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.04 E-value=1.5e-08 Score=90.71 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=44.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|++ ++ + .++.++.+|.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~-~-~~~~~~~~d~ 99 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HG-L-DNVEFRQQDL 99 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GC-C-TTEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cC-C-CCeEEEeccc
Confidence 459999999999999888876 7799999999999999988 33 3 3689988874
No 155
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.04 E-value=3.4e-11 Score=114.41 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=51.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH-------HHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD-------VALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~-------~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|.+++.++.. +.+|+|+|+|+ .+++.|++|++.|+ +.++|+++++|.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~~d~ 148 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHFGNA 148 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEESCH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEECCH
Confidence 358999999999999888874 67999999999 99999999999887 777899999873
No 156
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.04 E-value=3.8e-09 Score=99.73 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=58.2
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCC--
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-- 166 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~-- 166 (384)
+.+..|..++.+++... ...+|||||||+|.++..|+.. +.+|+|+|+|+.+++.|++++...+ ..
T Consensus 40 ~~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~ 107 (293)
T 3thr_A 40 SRTAEYKAWLLGLLRQH---------GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRR-KEPA 107 (293)
T ss_dssp CBCHHHHHHHHHHHHHT---------TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-TSHH
T ss_pred chHHHHHHHHHHHhccc---------CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcc-cccc
Confidence 34577888888887642 3468999999999998888765 5699999999999999999986553 22
Q ss_pred -CceEEEEcC
Q 016734 167 -ELIEIRKVD 175 (384)
Q Consensus 167 -~~I~~~~~d 175 (384)
.++.+..+|
T Consensus 108 ~~~~~~~~~d 117 (293)
T 3thr_A 108 FDKWVIEEAN 117 (293)
T ss_dssp HHTCEEEECC
T ss_pred cceeeEeecC
Confidence 246666665
No 157
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.04 E-value=6.8e-09 Score=100.95 Aligned_cols=62 Identities=15% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHH-------CCCC---CCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKS-------NPHI---SELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~-------n~~l---~~~I~~~~~d~~ 177 (384)
...+|||+|||+|.++..++... +..+|+|+|+++.+++.|++|++. |+ + .++++++.+|..
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~-~~~~~~~v~~~~~d~~ 177 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH-VEEWPDNVDFIHKDIS 177 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTC-SSCCCCCEEEEESCTT
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccc-ccccCCceEEEECChH
Confidence 34589999999999999988774 568999999999999999999985 32 3 357999988753
No 158
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.04 E-value=8.4e-10 Score=105.82 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=57.4
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEE
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~ 173 (384)
.+..+.+.+.. ....+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++++..++ +.++++++.
T Consensus 16 i~~~i~~~~~~---------~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~ 83 (285)
T 1zq9_A 16 IINSIIDKAAL---------RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP-VASKLQVLV 83 (285)
T ss_dssp HHHHHHHHTCC---------CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEE
T ss_pred HHHHHHHhcCC---------CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEE
Confidence 45556555532 23458999999999999888876 4699999999999999999998776 556899999
Q ss_pred cCCC
Q 016734 174 VDNS 177 (384)
Q Consensus 174 ~d~~ 177 (384)
+|..
T Consensus 84 ~D~~ 87 (285)
T 1zq9_A 84 GDVL 87 (285)
T ss_dssp SCTT
T ss_pred ccee
Confidence 8853
No 159
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.04 E-value=2.8e-09 Score=104.84 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceE
Q 016734 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (384)
Q Consensus 91 r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~ 170 (384)
+..|...+.+.+.. ....+|||||||+|.++..++.. ...+|+|+|+++ +++.|+++++.++ +.++|+
T Consensus 35 ~~~y~~~i~~~l~~---------~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~ 102 (348)
T 2y1w_A 35 TGTYQRAILQNHTD---------FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN-LTDRIV 102 (348)
T ss_dssp HHHHHHHHHHTGGG---------TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT-CTTTEE
T ss_pred HHHHHHHHHhcccc---------CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEE
Confidence 34556666655532 13468999999999998877754 456999999996 8899999999998 888999
Q ss_pred EEEcCCC
Q 016734 171 IRKVDNS 177 (384)
Q Consensus 171 ~~~~d~~ 177 (384)
++.+|..
T Consensus 103 ~~~~d~~ 109 (348)
T 2y1w_A 103 VIPGKVE 109 (348)
T ss_dssp EEESCTT
T ss_pred EEEcchh
Confidence 9998753
No 160
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.04 E-value=2.2e-09 Score=102.56 Aligned_cols=58 Identities=9% Similarity=-0.013 Sum_probs=48.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC--CCC--------CCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--PHI--------SELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n--~~l--------~~~I~~~~~d 175 (384)
.+.+|||||||+|.++..+++. +..+++++|+|+.+++.|++|+ .. + + ..+++++.+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~-l~~~~~~~~~~~v~~~~~D 142 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNG-LLEAMLNGKHEKAKLTIGD 142 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTT-HHHHHHTTCCSSEEEEESC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccc-cccccccCCCCcEEEEECc
Confidence 3468999999999999888876 7779999999999999999998 33 2 2 3578888876
No 161
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.03 E-value=4.5e-09 Score=95.58 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=43.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++... .+++|+|+++.+++.|+++... ++.++.+|.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~ 95 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD------GITYIHSRF 95 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS------CEEEEESCG
T ss_pred CCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC------CeEEEEccH
Confidence 4579999999999988887654 4899999999999999987542 488888763
No 162
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.03 E-value=1.2e-09 Score=110.72 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=51.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHH-------HCCCC-CCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK-------SNPHI-SELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~-------~n~~l-~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+.+.++...+..+++|||+++.+++.|++|++ .++ + .++|+++++|..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~~ 242 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDFL 242 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECccc
Confidence 4568999999999999888876655579999999999999998763 344 4 368999999864
No 163
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.03 E-value=2.2e-09 Score=104.13 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=51.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH--CCCC-CCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~--n~~l-~~~I~~~~~d~ 176 (384)
.+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++|+.. ++ + ..+++++.+|.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~Da 158 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGDG 158 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCH
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcH
Confidence 35699999999999998888766678999999999999999999865 33 3 45799988873
No 164
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.02 E-value=3e-09 Score=96.89 Aligned_cols=94 Identities=12% Similarity=0.159 Sum_probs=70.5
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-----cCCEEEEE
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-----LGWSFVGS 145 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-----~~~~v~gv 145 (384)
.+++..+.+..+..++. |... .++.+.+.... ....+|||||||+|.++..++... +..+|+|+
T Consensus 47 ~y~d~~~~~~~~~~~~~-p~~~---~~~~~~l~~~~-------~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v 115 (227)
T 2pbf_A 47 PYIDTPVYISHGVTISA-PHMH---ALSLKRLINVL-------KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL 115 (227)
T ss_dssp TTSSSCEEEETTEEECC-HHHH---HHHHHHHTTTS-------CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred cCCCCccccCCCCccCC-hHHH---HHHHHHHHhhC-------CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE
Confidence 35666788888888887 6543 34444443210 134689999999999998888765 45799999
Q ss_pred eCcHHHHHHHHHHHHHCCCC----CCceEEEEcCC
Q 016734 146 DMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (384)
Q Consensus 146 Did~~al~~A~~Ni~~n~~l----~~~I~~~~~d~ 176 (384)
|+++.+++.|++|++.++ + .+++.++.+|.
T Consensus 116 D~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 116 ERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNI 149 (227)
T ss_dssp ESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCG
T ss_pred eCCHHHHHHHHHHHHHcC-ccccccCCEEEEECCh
Confidence 999999999999998875 3 35789888874
No 165
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.02 E-value=5.5e-09 Score=92.21 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=49.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++.. +.+++|+|+++.+++.|++++..++ +. ++.++.+|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~ 89 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN-LD-NLHTRVVDL 89 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEECCG
T ss_pred CCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC-CC-CcEEEEcch
Confidence 459999999999998888765 7799999999999999999998886 53 488888763
No 166
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4.6e-09 Score=99.99 Aligned_cols=62 Identities=15% Similarity=0.172 Sum_probs=54.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHC-CCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n-~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..|+..+ ++.+|+|+|+++.+++.|+++++.+ + ...++.++.+|..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD-TYKNVSFKISSSD 99 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC-CCCceEEEEcCHH
Confidence 35699999999999999999876 7899999999999999999999987 3 4568999998854
No 167
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.02 E-value=4.1e-10 Score=105.30 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=62.7
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|+...++.++.... ...+|||||||+|..++.++...+ +.+|+|+|+++.+++.|++|++.++ +.+
T Consensus 46 ~~~~~~l~~l~~~~------------~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~ 112 (242)
T 3r3h_A 46 PEQAQFMQMLIRLT------------RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-QEH 112 (242)
T ss_dssp HHHHHHHHHHHHHH------------TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTT
T ss_pred HHHHHHHHHHHhhc------------CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC
Confidence 55566666555443 245899999999999999998775 7899999999999999999999998 888
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 113 ~i~~~~gda 121 (242)
T 3r3h_A 113 KIKLRLGPA 121 (242)
T ss_dssp TEEEEESCH
T ss_pred cEEEEEcCH
Confidence 999999874
No 168
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.02 E-value=8.8e-10 Score=106.85 Aligned_cols=70 Identities=16% Similarity=0.082 Sum_probs=55.4
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
+.+..+.+.+.. ....+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++++... ++++++
T Consensus 37 ~i~~~Iv~~l~~---------~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~----~~v~vi 101 (295)
T 3gru_A 37 NFVNKAVESANL---------TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELY----NNIEII 101 (295)
T ss_dssp HHHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHC----SSEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccC----CCeEEE
Confidence 345556665532 13458999999999999888876 579999999999999999998743 269999
Q ss_pred EcCCC
Q 016734 173 KVDNS 177 (384)
Q Consensus 173 ~~d~~ 177 (384)
++|..
T Consensus 102 ~gD~l 106 (295)
T 3gru_A 102 WGDAL 106 (295)
T ss_dssp ESCTT
T ss_pred ECchh
Confidence 99854
No 169
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.01 E-value=7.2e-09 Score=101.23 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=54.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++...++++++++|+ +.+++.|++|+..++ +.++|+++.+|.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 242 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDF 242 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 456999999999999999999989999999999 999999999999987 778899998874
No 170
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.01 E-value=1.8e-09 Score=101.32 Aligned_cols=75 Identities=11% Similarity=0.185 Sum_probs=62.8
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|+...++.++.... ...+|||||||+|..+..++...+ +.+++++|+++.+++.|++|++.++ +.+
T Consensus 65 ~~~~~ll~~l~~~~------------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~ 131 (247)
T 1sui_A 65 ADEGQFLSMLLKLI------------NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-VDH 131 (247)
T ss_dssp HHHHHHHHHHHHHT------------TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT-CGG
T ss_pred HHHHHHHHHHHHhh------------CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC
Confidence 56666666555432 245899999999999999998877 7899999999999999999999998 788
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 132 ~i~~~~gda 140 (247)
T 1sui_A 132 KIDFREGPA 140 (247)
T ss_dssp GEEEEESCH
T ss_pred CeEEEECCH
Confidence 899998874
No 171
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.01 E-value=8.2e-09 Score=101.14 Aligned_cols=61 Identities=15% Similarity=0.106 Sum_probs=55.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+...++.++|+.+++++|+ +.+++.|+++++.++ +.++|+++.+|..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 250 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIY 250 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTT
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccc
Confidence 456999999999999999999999999999999 999999999999987 7888999998753
No 172
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.01 E-value=1.9e-10 Score=116.40 Aligned_cols=57 Identities=16% Similarity=-0.016 Sum_probs=50.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC--CCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--PHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n--~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|.+++.|+.. +.+|+|+|+|+.+++.|++|++.+ + + ++|+++++|.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da 152 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDF 152 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCG
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcH
Confidence 468999999999998888754 579999999999999999999988 7 5 6799999884
No 173
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=1.1e-09 Score=110.05 Aligned_cols=60 Identities=22% Similarity=0.083 Sum_probs=53.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccC-CEEEEEeCcHHHHHHHHHHHHHCCCCCCc-eEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISEL-IEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~-~~v~gvDid~~al~~A~~Ni~~n~~l~~~-I~~~~~d~ 176 (384)
..+|||++||+|.+++.++.+..+ .+|+++|+|+.|++.|++|++.|+ ++++ ++++.+|.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da 114 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEA 114 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCH
Confidence 468999999999999999887666 589999999999999999999998 8877 99988874
No 174
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.00 E-value=2e-09 Score=99.42 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=61.9
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCC
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~ 167 (384)
|....++..+.... ...+|||||||+|..+..++...+ +.+++++|+++.+++.|++|++.++ +.+
T Consensus 58 ~~~~~~l~~l~~~~------------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~ 124 (232)
T 3cbg_A 58 PEQAQFLGLLISLT------------GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-VAE 124 (232)
T ss_dssp HHHHHHHHHHHHHH------------TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGG
T ss_pred HHHHHHHHHHHHhc------------CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC
Confidence 56666666555433 235899999999999999988776 6899999999999999999999987 777
Q ss_pred ceEEEEcCC
Q 016734 168 LIEIRKVDN 176 (384)
Q Consensus 168 ~I~~~~~d~ 176 (384)
+|+++.+|.
T Consensus 125 ~i~~~~~d~ 133 (232)
T 3cbg_A 125 KISLRLGPA 133 (232)
T ss_dssp GEEEEESCH
T ss_pred cEEEEEcCH
Confidence 899998873
No 175
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.00 E-value=5.4e-09 Score=89.47 Aligned_cols=153 Identities=10% Similarity=-0.011 Sum_probs=97.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|.++..++... ++.+++|+|+++ +++. .++.++.+|..+. +. .
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~-~~----------~ 77 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDE-LV----------M 77 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSH-HH----------H
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccc-hh----------h
Confidence 34589999999999999888875 568999999998 6432 3588888774320 00 0
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
. .+...+ .+++||+|+||+|+........ ...
T Consensus 78 ~-----------------------------------~~~~~~--~~~~~D~i~~~~~~~~~~~~~~----------~~~- 109 (180)
T 1ej0_A 78 K-----------------------------------ALLERV--GDSKVQVVMSDMAPNMSGTPAV----------DIP- 109 (180)
T ss_dssp H-----------------------------------HHHHHH--TTCCEEEEEECCCCCCCSCHHH----------HHH-
T ss_pred h-----------------------------------hhhccC--CCCceeEEEECCCccccCCCcc----------chH-
Confidence 0 000001 3468999999999864321100 000
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC---eeEEEEEEec
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSF 344 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~~AWsf 344 (384)
-...+...++++..++++.+|++.+......+...+.+.+++. +..+.+.....++ ...|+++-.|
T Consensus 110 ----~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 110 ----RAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVRKPDSSRARSREVYIVATGR 178 (180)
T ss_dssp ----HHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEeecCCcccccCceEEEEEccC
Confidence 0123457778888888888998876655577888898888875 6666655433322 2555555443
No 176
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.99 E-value=8.3e-09 Score=95.09 Aligned_cols=72 Identities=21% Similarity=0.349 Sum_probs=56.1
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEE
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~ 173 (384)
.+.++.+++.... .....+|||+|||+|.++..|+.. +.+++|+|+|+.+++.|++++..++ + ++.++.
T Consensus 26 ~~~~~~~~~~~~~------~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~~ 94 (252)
T 1wzn_A 26 EIDFVEEIFKEDA------KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERN-L--KIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHHTC------SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CCEEEE
T ss_pred HHHHHHHHHHHhc------ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEE
Confidence 4556666654321 123468999999999998888765 6799999999999999999998876 4 588888
Q ss_pred cCC
Q 016734 174 VDN 176 (384)
Q Consensus 174 ~d~ 176 (384)
+|.
T Consensus 95 ~d~ 97 (252)
T 1wzn_A 95 GDV 97 (252)
T ss_dssp SCG
T ss_pred CCh
Confidence 774
No 177
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.99 E-value=4.5e-09 Score=106.99 Aligned_cols=147 Identities=13% Similarity=0.060 Sum_probs=99.7
Q ss_pred CCeEEEECCcccHHHHHHHhhccC-CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~-~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
..+|||+|||+|..+..++...++ .+++|+|+++.+++.+++|+++++ +. ++.++.+|..+.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~~--------------- 322 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-IK-IVKPLVKDARKA--------------- 322 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-CC-SEEEECSCTTCC---------------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-CC-cEEEEEcChhhc---------------
Confidence 458999999999999999988776 799999999999999999999997 64 588887774320
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
...+ .++.||+|+||||+....... ..|......+...+
T Consensus 323 -------------------------------------~~~~--~~~~fD~Vl~D~Pcsg~g~~~-~~pd~~~~~~~~~~- 361 (450)
T 2yxl_A 323 -------------------------------------PEII--GEEVADKVLLDAPCTSSGTIG-KNPELRWRLREDKI- 361 (450)
T ss_dssp -------------------------------------SSSS--CSSCEEEEEEECCCCCGGGTT-TSTTHHHHCCTTSH-
T ss_pred -------------------------------------chhh--ccCCCCEEEEcCCCCCCeeec-cChhhhhhCCHHHH-
Confidence 0001 236799999999997653221 12221110011100
Q ss_pred ccCch-HHHHHHHHHHHHHhhccCeEEE---EEecCCCCHHHHHHHHHHc-CCe
Q 016734 275 CSGGE-RAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKV-GVT 323 (384)
Q Consensus 275 ~~GGe-l~Fv~~ii~eS~~l~~~~~w~t---~~vgk~~~l~~l~~~L~~~-g~~ 323 (384)
-+ ..+-..+++++..+++.+|.+. +.+...++-..+...|+++ ++.
T Consensus 362 ---~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 362 ---NEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp ---HHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred ---HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 01 1233678888888888888653 3344456677778888887 454
No 178
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.99 E-value=2.7e-09 Score=99.14 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=54.8
Q ss_pred CCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...+ +.+++++|+|+.+++.|++|++..+ +.++|+++.+|.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda 131 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDA 131 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 45899999999999999998876 7899999999999999999999998 788899999874
No 179
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.99 E-value=4.9e-09 Score=93.44 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=47.1
Q ss_pred eEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
+|||||||+|.++..++.. +.+++|+|+++.+++.|++++..++ + ++.++.+|.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 85 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKG-V--KITTVQSNL 85 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHT-C--CEEEECCBT
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcCh
Confidence 8999999999998888764 6799999999999999999998876 4 588887764
No 180
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.98 E-value=3.7e-08 Score=90.01 Aligned_cols=57 Identities=11% Similarity=-0.005 Sum_probs=45.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|.++..++...++.+|+|+|+|+.+++.+.++++... ++.++.+|.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~----~v~~~~~d~ 114 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN----NIIPLLFDA 114 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS----SEEEECSCT
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC----CeEEEEcCC
Confidence 458999999999998888877666699999999999887777766542 477776653
No 181
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=8.8e-09 Score=96.93 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=44.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++. ++.+++|+|+++.+++.|+++. .++.++.+|.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~ 109 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADA 109 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCT
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECCh
Confidence 346899999999999888876 7889999999999999998875 2466777764
No 182
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.98 E-value=4.6e-09 Score=96.59 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=36.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~N 158 (384)
...+|||||||+|.++..++.. +++++|+|+|+.+++.|+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT
T ss_pred CCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh
Confidence 3468999999999998888765 67899999999999998876
No 183
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.97 E-value=2.4e-09 Score=108.26 Aligned_cols=146 Identities=12% Similarity=0.017 Sum_probs=99.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||+|||+|.....++...++.+|+|+|+++.+++.+++|+++++ + .+.++.+|..+
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~--~~~~~~~D~~~---------------- 306 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-M--KATVKQGDGRY---------------- 306 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-C--CCEEEECCTTC----------------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-C--CeEEEeCchhh----------------
Confidence 3458999999999999999988877899999999999999999999997 5 37888777432
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+...+ .+++||+|+||||+....... ..|......+...+
T Consensus 307 ------------------------------------~~~~~--~~~~fD~Vl~D~Pcsg~g~~~-~~p~~~~~~~~~~~- 346 (429)
T 1sqg_A 307 ------------------------------------PSQWC--GEQQFDRILLDAPCSATGVIR-RHPDIKWLRRDRDI- 346 (429)
T ss_dssp ------------------------------------THHHH--TTCCEEEEEEECCCCCGGGTT-TCTTHHHHCCTTHH-
T ss_pred ------------------------------------chhhc--ccCCCCEEEEeCCCCcccccC-CCcchhhcCCHHHH-
Confidence 00001 246899999999997654322 12322111111100
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEE---EecCCCCHHHHHHHHHHcC
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVG 321 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~---~vgk~~~l~~l~~~L~~~g 321 (384)
.+-..+...+++++..+++.+|++.. -+...++...+...|++++
T Consensus 347 --~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 347 --PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp --HHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 00124556788888888888887532 3444567777888888763
No 184
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.97 E-value=7.3e-09 Score=93.36 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=44.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.. +.+++|+|+++.+++.|++++. .++.++.+|.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~ 98 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP------KEFSITEGDF 98 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC------TTCCEESCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC------CceEEEeCCh
Confidence 3468999999999998888765 7899999999999999998865 2467776664
No 185
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.97 E-value=8e-09 Score=95.28 Aligned_cols=55 Identities=25% Similarity=0.230 Sum_probs=47.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++...++.+++|+|+++.+++.|+++ . .++.++.+|.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---~----~~~~~~~~d~ 87 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---L----PNTNFGKADL 87 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---S----TTSEEEECCT
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C----CCcEEEECCh
Confidence 34689999999999999999888889999999999999999988 2 2478887764
No 186
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.97 E-value=2.6e-09 Score=97.77 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=50.4
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~ 171 (384)
..+|||||||+|.+++.++...|+++++|+|||+.|++.|++|++.++ +..++.+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~ 104 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF 104 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE
Confidence 569999999999999999988899999999999999999999999998 6666666
No 187
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.97 E-value=3.4e-09 Score=105.48 Aligned_cols=177 Identities=14% Similarity=0.084 Sum_probs=115.9
Q ss_pred ccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHH
Q 016734 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (384)
Q Consensus 71 ~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~ 150 (384)
.+||.-+.+.....+.. .+ ..|-+.+...... ...+.+|||||||+|.++..+++..+ .+|++||||+.
T Consensus 154 ~~~G~~L~LDG~~q~te-~D-~~YhE~l~~~~~~--------~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~ 222 (364)
T 2qfm_A 154 KQFGNILILSGDVNLAE-SD-LAYTRAIMGSGKE--------DYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQM 222 (364)
T ss_dssp TTTEEEEEETTEEEEET-TC-HHHHHHHTTTTCC--------CCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHH
T ss_pred CCcceEEEECCEEeeec-Cc-hHHHHHHhhhhhh--------CCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHH
Confidence 35777777777777776 66 6666654322210 12567999999999999887776544 79999999999
Q ss_pred HHHHHHHHHHHCC--CCCC----ceEEEEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCC
Q 016734 151 ALEWAEKNVKSNP--HISE----LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQS 224 (384)
Q Consensus 151 al~~A~~Ni~~n~--~l~~----~I~~~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 224 (384)
+++.|++|+...+ .+.+ +++++.+|..+
T Consensus 223 vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~---------------------------------------------- 256 (364)
T 2qfm_A 223 VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP---------------------------------------------- 256 (364)
T ss_dssp HHHHHHHHCCC----CCSSSEETTEEEEESCHHH----------------------------------------------
T ss_pred HHHHHHHHHHHhccccccccCCCcEEEEECcHHH----------------------------------------------
Confidence 9999999975321 1332 78998887421
Q ss_pred CCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEe
Q 016734 225 SYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (384)
Q Consensus 225 ~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~v 304 (384)
++.......++||+||++||..+... .|. ++ -...|++.+.+.+.+.++.+|++.+..
T Consensus 257 ------~L~~~~~~~~~fDvII~D~~d~P~~~----~p~--------~L----~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 257 ------VLKRYAKEGREFDYVINDLTAVPIST----SPE--------ED----STWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp ------HHHHHHHHTCCEEEEEEECCSSCCCC----C----------------CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------HHHhhhccCCCceEEEECCCCcccCc----Cch--------hh----hHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 11111012578999999997633110 110 11 136899999888899999999998887
Q ss_pred cCCCCHHHHHHHHHH---cCCeEEEE
Q 016734 305 GRKSNLKFLISKLRK---VGVTIVKT 327 (384)
Q Consensus 305 gk~~~l~~l~~~L~~---~g~~~v~~ 327 (384)
+ ...+.++...+++ .-|..+..
T Consensus 315 ~-s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 315 N-CVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp E-ETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred C-CcchHHHHHHHHHHHHHhCCceEE
Confidence 7 4445655555543 23444554
No 188
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.97 E-value=1e-09 Score=109.72 Aligned_cols=59 Identities=17% Similarity=0.011 Sum_probs=52.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC---------------CCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---------------PHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n---------------~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|++++.++.+.++.+|+++|+|+.+++.|++|++.| + +++ ++++++|.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-l~~-i~v~~~Da 121 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-EKT-IVINHDDA 121 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-SSE-EEEEESCH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-CCc-eEEEcCcH
Confidence 45899999999999999998877789999999999999999999999 6 654 88888874
No 189
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.97 E-value=3.8e-09 Score=103.49 Aligned_cols=136 Identities=13% Similarity=0.038 Sum_probs=93.0
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
+.+|||||||+|.+...+++.+++.++++||||+.+++.|+++...+ ...+++++.+|..+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~--~~~rv~v~~~Da~~----------------- 150 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP--RAPRVKIRVDDARM----------------- 150 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC--CTTTEEEEESCHHH-----------------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc--CCCceEEEECcHHH-----------------
Confidence 45999999999999999998889999999999999999999998644 24589999887421
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
++... .+++||+|+++.+.... .| ..+
T Consensus 151 -----------------------------------~l~~~--~~~~fDvIi~D~~~~~~------~~--------~~L-- 177 (317)
T 3gjy_A 151 -----------------------------------VAESF--TPASRDVIIRDVFAGAI------TP--------QNF-- 177 (317)
T ss_dssp -----------------------------------HHHTC--CTTCEEEEEECCSTTSC------CC--------GGG--
T ss_pred -----------------------------------HHhhc--cCCCCCEEEECCCCccc------cc--------hhh--
Confidence 11111 24689999999632210 01 111
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEEEecCCCC---HHHHHHHHHHcCCeEEEEEEe
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN---LKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~---l~~l~~~L~~~g~~~v~~~e~ 330 (384)
+...++++..+.++.+|+|.+-++.... +..+.+.|++. |..+.+..+
T Consensus 178 ------~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v~~~~~ 228 (317)
T 3gjy_A 178 ------TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHVAVIAD 228 (317)
T ss_dssp ------SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEEEEEEC
T ss_pred ------hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCceEEEEe
Confidence 1123445566778899998877764433 34566666665 556666653
No 190
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.96 E-value=1.4e-08 Score=98.79 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=55.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+|.+...++..+|+.+++++|+ +.+++.|++++...+ +.++|+++.+|..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLL 239 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcc
Confidence 57999999999999999999999999999999 889999999999987 8889999998854
No 191
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.96 E-value=3.2e-08 Score=97.70 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=55.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++..+|+.+++++|+ +.+++.|++++...+ +.++|+++.+|.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~ 261 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDF 261 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCC
Confidence 457999999999999999999999999999999 999999999999987 888999998874
No 192
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.95 E-value=4.9e-09 Score=96.73 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=54.2
Q ss_pred CCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|..+..++...+ +.+++++|+++.+++.|+++++.++ +.++|.++.+|.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 121 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSA 121 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCH
Confidence 45899999999999999988876 6899999999999999999999987 777899998874
No 193
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.95 E-value=1.4e-08 Score=90.51 Aligned_cols=132 Identities=9% Similarity=0.080 Sum_probs=87.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.++..++...+. +++|+|+++.+++.|++++... .++.++.+|..+
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~----~~i~~~~~d~~~----------------- 100 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHV----PQLRWETMDVRK----------------- 100 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTC----TTCEEEECCTTS-----------------
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccC----CCcEEEEcchhc-----------------
Confidence 458999999999999888876443 8999999999999999998642 368888887432
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+ .+ .+++||+|+||+|+........ .| +.
T Consensus 101 -----------------------------------~--~~--~~~~fD~v~~~~~~~~~~~~~~-~~-----------~~ 129 (215)
T 2pxx_A 101 -----------------------------------L--DF--PSASFDVVLEKGTLDALLAGER-DP-----------WT 129 (215)
T ss_dssp -----------------------------------C--CS--CSSCEEEEEEESHHHHHTTTCS-CT-----------TS
T ss_pred -----------------------------------C--CC--CCCcccEEEECcchhhhccccc-cc-----------cc
Confidence 0 01 2467999999999853211000 00 00
Q ss_pred cC-chHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCC
Q 016734 276 SG-GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322 (384)
Q Consensus 276 ~G-Gel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~ 322 (384)
.. ....-...++++..++++.+|++.+..- ..-......+...++
T Consensus 130 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~--~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 130 VSSEGVHTVDQVLSEVSRVLVPGGRFISMTS--AAPHFRTRHYAQAYY 175 (215)
T ss_dssp CCHHHHHHHHHHHHHHHHHEEEEEEEEEEES--CCHHHHHHHHCCGGG
T ss_pred cccchhHHHHHHHHHHHHhCcCCCEEEEEeC--CCcHHHHHHHhcccc
Confidence 00 1244567788888888888888754443 333334455555554
No 194
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.95 E-value=2e-08 Score=94.34 Aligned_cols=132 Identities=11% Similarity=-0.006 Sum_probs=93.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|.....||... +.-+|+|+|+++++++.|+++++..+ ++..+.+|... |.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~~~--p~----------- 139 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDARF--PE----------- 139 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCTTC--GG-----------
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEeccC--cc-----------
Confidence 34689999999999998888764 66799999999999999999887654 47888777432 10
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
.. ....+.+|+|+|..|+...
T Consensus 140 -------------------------------------~~---~~~~~~vDvVf~d~~~~~~------------------- 160 (233)
T 4df3_A 140 -------------------------------------KY---RHLVEGVDGLYADVAQPEQ------------------- 160 (233)
T ss_dssp -------------------------------------GG---TTTCCCEEEEEECCCCTTH-------------------
T ss_pred -------------------------------------cc---ccccceEEEEEEeccCChh-------------------
Confidence 00 0124689999998765421
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEec---------CCCCHHHHHHHHHHcCCeEEEEEEee
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVG---------RKSNLKFLISKLRKVGVTIVKTTEFV 331 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg---------k~~~l~~l~~~L~~~g~~~v~~~e~~ 331 (384)
...++.++..+++++|.+...+- -+..++..++.|++.||+.+++.++.
T Consensus 161 ---------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~ 218 (233)
T 4df3_A 161 ---------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLD 218 (233)
T ss_dssp ---------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred ---------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 23345666677888887654431 12234567788999999988887764
No 195
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.94 E-value=2.5e-09 Score=100.16 Aligned_cols=56 Identities=13% Similarity=0.120 Sum_probs=47.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...|+.+. .+|+|+|+|+.+++.|++|+... ++++++.+|.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~ 85 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDI 85 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCG
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccC----CCeEEEEChH
Confidence 34689999999999998888764 79999999999999999998643 3689988874
No 196
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.94 E-value=1.6e-08 Score=90.74 Aligned_cols=84 Identities=18% Similarity=0.182 Sum_probs=63.1
Q ss_pred EEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHH
Q 016734 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (384)
Q Consensus 76 ~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A 155 (384)
.+.+..+..+.. |. .+..+.+.+.. ....+|||||||+|.++..++.. +.+|+|+|+++.+++.|
T Consensus 51 ~~~~~~~~~~~~-~~---~~~~~~~~l~~---------~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a 115 (210)
T 3lbf_A 51 ALPIGQGQTISQ-PY---MVARMTELLEL---------TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQA 115 (210)
T ss_dssp CEECTTSCEECC-HH---HHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHH
T ss_pred ccccCCCCEeCC-HH---HHHHHHHhcCC---------CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHH
Confidence 345555555555 32 33444454432 23568999999999999888876 68999999999999999
Q ss_pred HHHHHHCCCCCCceEEEEcCC
Q 016734 156 EKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 156 ~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
++|+..++ +. +++++.+|.
T Consensus 116 ~~~~~~~~-~~-~v~~~~~d~ 134 (210)
T 3lbf_A 116 RRRLKNLD-LH-NVSTRHGDG 134 (210)
T ss_dssp HHHHHHTT-CC-SEEEEESCG
T ss_pred HHHHHHcC-CC-ceEEEECCc
Confidence 99999987 55 699988874
No 197
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.94 E-value=4e-09 Score=95.50 Aligned_cols=61 Identities=21% Similarity=0.204 Sum_probs=47.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCC----------CCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH----------ISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~----------l~~~I~~~~~d~~ 177 (384)
...+|||+|||+|..+..|+.+ +++|+|+|+|+.|++.|+++...... ...+|+++++|..
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 3468999999999998888865 78999999999999999987643100 0235888888753
No 198
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.94 E-value=4.2e-09 Score=109.97 Aligned_cols=61 Identities=15% Similarity=0.021 Sum_probs=47.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhcc------------------CCEEEEEeCcHHHHHHHHHHHHHCCCCCC----ceEEE
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLL------------------GWSFVGSDMTDVALEWAEKNVKSNPHISE----LIEIR 172 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~------------------~~~v~gvDid~~al~~A~~Ni~~n~~l~~----~I~~~ 172 (384)
...+|||.|||||.+.+.++.... ...++|+|+++.+++.|+.|+..++ +.. ++.++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~~~~~~I~ 247 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNLDHGGAIR 247 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBGGGTBSEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCccccccCCeE
Confidence 346899999999999877765432 2479999999999999999999887 543 25667
Q ss_pred EcCC
Q 016734 173 KVDN 176 (384)
Q Consensus 173 ~~d~ 176 (384)
++|.
T Consensus 248 ~gDt 251 (541)
T 2ar0_A 248 LGNT 251 (541)
T ss_dssp ESCT
T ss_pred eCCC
Confidence 7663
No 199
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.93 E-value=2e-08 Score=97.19 Aligned_cols=59 Identities=14% Similarity=0.011 Sum_probs=54.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++..+|+.+++++|+ +.+++.|++++...+ +.++|+++.+|.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 228 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSF 228 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCC
Confidence 46999999999999999999999999999999 999999999999887 888999998874
No 200
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.93 E-value=9.4e-10 Score=118.82 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=41.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhcc---CCEEEEEeCcHHHHHHH--HHHHHHCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLL---GWSFVGSDMTDVALEWA--EKNVKSNP 163 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~---~~~v~gvDid~~al~~A--~~Ni~~n~ 163 (384)
...+|||.|||||++.+.++...+ ..+++|+|+|+.+++.| +.|+..|.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 356899999999999988887664 35799999999999999 88887654
No 201
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.93 E-value=1e-09 Score=114.75 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=91.8
Q ss_pred CeEEEECCcccHHHHHHHhhcc---------------CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLL---------------GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~---------------~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p 181 (384)
.+|||.|||||.+.+.++.... ...++|+|+++.+++.|+.|+..++ +...|.++++|...
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~--- 321 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFL--- 321 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTT---
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhc---
Confidence 4899999999998776654321 4689999999999999999999987 65544444444221
Q ss_pred cccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhh---
Q 016734 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--- 258 (384)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~--- 258 (384)
. +. ....+||+|||||||.......
T Consensus 322 ------------------------------------~-----------~~-----~~~~~fD~Iv~NPPf~~~~~~~~~~ 349 (544)
T 3khk_A 322 ------------------------------------D-----------DQ-----HPDLRADFVMTNPPFNMKDWWHEKL 349 (544)
T ss_dssp ------------------------------------S-----------CS-----CTTCCEEEEEECCCSSCCSCCCGGG
T ss_pred ------------------------------------C-----------cc-----cccccccEEEECCCcCCccccchhh
Confidence 0 00 0246899999999998532111
Q ss_pred ccCCccccCCCcc--c--c-cccCchHHHHHHHHHHHHHhhccCeEEEEEec-----CC-CCHHHHHHHHHHcCCeEEEE
Q 016734 259 GLNPKTSCGGTPE--E--M-VCSGGERAFITRIIEDSVALKQTFRWYTSMVG-----RK-SNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 259 ~~~p~~~~~g~~~--E--~-~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg-----k~-~~l~~l~~~L~~~g~~~v~~ 327 (384)
...++... |... . + -...+++.|+..++ .+++.+|...+.+. .. +....+.+.|-+.+. ...+
T Consensus 350 ~~d~r~~~-g~~~~~~~~~~~~~~~~~~Fl~~~l----~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~-l~aI 423 (544)
T 3khk_A 350 ADDPRWTI-NTNGEKRILTPPTGNANFAWMLHML----YHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL-VECM 423 (544)
T ss_dssp TTCGGGEE-CCC--CEECCCCTTCTHHHHHHHHH----HTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred hhhhhhhc-CcccccccccCCCcchhHHHHHHHH----HHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc-HhEE
Confidence 11111111 1000 0 0 01223567776654 45667777655553 12 346788888877664 2345
Q ss_pred EEe
Q 016734 328 TEF 330 (384)
Q Consensus 328 ~e~ 330 (384)
+.+
T Consensus 424 I~L 426 (544)
T 3khk_A 424 VAL 426 (544)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 202
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.93 E-value=7.4e-09 Score=95.24 Aligned_cols=57 Identities=7% Similarity=-0.135 Sum_probs=47.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++.. ...+++|+|+|+.+++.|+++++.++ .++.++.+|.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~ 117 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLW 117 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCH
T ss_pred CCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCH
Confidence 468999999999998888643 33489999999999999999988765 4688888873
No 203
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.93 E-value=1.8e-08 Score=92.94 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=47.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++.. +.+++|+|+|+.+++.|++++ .. ...++.++.+|.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~--~~~~~~~~~~d~ 95 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AG--VDRKVQVVQADA 95 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TT--SCTTEEEEESCT
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hc--cCCceEEEEccc
Confidence 3568999999999998888765 679999999999999999998 22 335699988874
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=5.5e-09 Score=97.66 Aligned_cols=65 Identities=18% Similarity=0.046 Sum_probs=50.1
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
.+...+.+.+.. ....+|||||||+|.++..++. ++.+|+|+|+|+.+++.|+++. ++.++
T Consensus 21 ~~~~~l~~~~~~---------~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--------~~~~~ 81 (261)
T 3ege_A 21 RIVNAIINLLNL---------PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP--------QVEWF 81 (261)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT--------TEEEE
T ss_pred HHHHHHHHHhCC---------CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc--------CCEEE
Confidence 456666666642 2356999999999999888875 7789999999999998876543 47888
Q ss_pred EcCC
Q 016734 173 KVDN 176 (384)
Q Consensus 173 ~~d~ 176 (384)
.+|.
T Consensus 82 ~~d~ 85 (261)
T 3ege_A 82 TGYA 85 (261)
T ss_dssp CCCT
T ss_pred ECch
Confidence 7764
No 205
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.92 E-value=2.3e-09 Score=102.70 Aligned_cols=67 Identities=12% Similarity=0.058 Sum_probs=53.1
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEE
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~ 173 (384)
.+..+.+.+.. ... +|||||||+|.+...|+.. +.+|+|+|+|+++++.+++++.. +++++++
T Consensus 35 i~~~Iv~~~~~---------~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~ 97 (271)
T 3fut_A 35 HLRRIVEAARP---------FTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG-----LPVRLVF 97 (271)
T ss_dssp HHHHHHHHHCC---------CCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT-----SSEEEEE
T ss_pred HHHHHHHhcCC---------CCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC-----CCEEEEE
Confidence 45556666543 134 8999999999999988876 46899999999999999998752 3699999
Q ss_pred cCCC
Q 016734 174 VDNS 177 (384)
Q Consensus 174 ~d~~ 177 (384)
+|..
T Consensus 98 ~D~l 101 (271)
T 3fut_A 98 QDAL 101 (271)
T ss_dssp SCGG
T ss_pred CChh
Confidence 9854
No 206
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.92 E-value=3.1e-09 Score=106.31 Aligned_cols=59 Identities=10% Similarity=0.103 Sum_probs=49.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...|||||||+|.+++.+| +.-..+|+|||.++ +++.|+++++.|+ ++++|++++++..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa-~aGA~~V~ave~s~-~~~~a~~~~~~n~-~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCA-QAGARRVYAVEASA-IWQQAREVVRFNG-LEDRVHVLPGPVE 142 (376)
T ss_dssp TCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-THHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCEEEEeCCCccHHHHHHH-HhCCCEEEEEeChH-HHHHHHHHHHHcC-CCceEEEEeeeee
Confidence 4589999999998876555 33334899999996 7899999999998 9999999998753
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.90 E-value=1.5e-08 Score=98.35 Aligned_cols=138 Identities=13% Similarity=0.052 Sum_probs=92.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH-CCC-C-CCceEEEEcCCCCCCCcccccccCCc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-NPH-I-SELIEIRKVDNSESTPSIQESLTGKS 191 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~-n~~-l-~~~I~~~~~d~~~~~p~~~~~~~~~~ 191 (384)
.+.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++.. +.. + ..+++++.+|..+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~------------- 143 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA------------- 143 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH-------------
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH-------------
Confidence 34699999999999998888766678999999999999999999864 211 2 3579999887321
Q ss_pred cccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcc
Q 016734 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPE 271 (384)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~ 271 (384)
.+ ....++||+|+|++|..... . .| .
T Consensus 144 ---------------------------------------~l---~~~~~~fD~Ii~d~~~~~~~--~--~~-------~- 169 (314)
T 1uir_A 144 ---------------------------------------YL---ERTEERYDVVIIDLTDPVGE--D--NP-------A- 169 (314)
T ss_dssp ---------------------------------------HH---HHCCCCEEEEEEECCCCBST--T--CG-------G-
T ss_pred ---------------------------------------HH---HhcCCCccEEEECCCCcccc--c--Cc-------c-
Confidence 01 11246899999998653200 0 00 0
Q ss_pred cccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC-----CCHHHHHHHHHHcCCeEEEE
Q 016734 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-----SNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 272 E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~-----~~l~~l~~~L~~~g~~~v~~ 327 (384)
+-.+...++++..+.++.+|++.+..+.. .....+.+.|++. |..+..
T Consensus 170 -------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 170 -------RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp -------GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEEE
T ss_pred -------hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCceEE
Confidence 11123455566677888999887665432 3356777777766 444544
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.90 E-value=2.1e-08 Score=95.96 Aligned_cols=97 Identities=9% Similarity=-0.003 Sum_probs=64.5
Q ss_pred cCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHH
Q 016734 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (384)
Q Consensus 72 ~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~a 151 (384)
.||.-+.+........ +....|-+.+..+..... ..+.+|||||||+|.++..+++..+..+++++|+|+.+
T Consensus 43 ~~g~~l~ldg~~q~~~-~~e~~Y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 114 (283)
T 2i7c_A 43 TYGKVLVLDGVIQLTE-KDEFAYHEMMTHVPMTVS-------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETV 114 (283)
T ss_dssp SSCEEEEETTEEEEET-TTHHHHHHHHHHHHHTTS-------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHH
T ss_pred CCCEEEEECCEeeecc-cchhhHHHHHHHHHHhcC-------CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHH
Confidence 3555555543333333 444556554443322111 23569999999999999888866667899999999999
Q ss_pred HHHHHHHHHHCC-CC-CCceEEEEcCC
Q 016734 152 LEWAEKNVKSNP-HI-SELIEIRKVDN 176 (384)
Q Consensus 152 l~~A~~Ni~~n~-~l-~~~I~~~~~d~ 176 (384)
++.|++++..++ .+ ..+++++.+|.
T Consensus 115 i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 115 IEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp HHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred HHHHHHHhHHhccccCCCcEEEEECCh
Confidence 999999986431 01 35789888873
No 209
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.90 E-value=6.5e-09 Score=96.48 Aligned_cols=69 Identities=12% Similarity=0.022 Sum_probs=54.0
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
.|.+.+++.+.. ...+|||||||+|.++..++...+ .+++|||+|+.+++.|+++.+..+ .++.++
T Consensus 48 ~~m~~~a~~~~~----------~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~ 113 (236)
T 3orh_A 48 PYMHALAAAASS----------KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT---HKVIPL 113 (236)
T ss_dssp HHHHHHHHHHTT----------TCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCS---SEEEEE
T ss_pred HHHHHHHHhhcc----------CCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCC---CceEEE
Confidence 355666666532 456999999999998887776544 589999999999999999998775 257777
Q ss_pred EcC
Q 016734 173 KVD 175 (384)
Q Consensus 173 ~~d 175 (384)
.++
T Consensus 114 ~~~ 116 (236)
T 3orh_A 114 KGL 116 (236)
T ss_dssp ESC
T ss_pred eeh
Confidence 776
No 210
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.90 E-value=9.7e-09 Score=99.25 Aligned_cols=58 Identities=19% Similarity=0.043 Sum_probs=53.1
Q ss_pred CeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
.+|||||||+|.+...++..+|+.+++++|+ +.+++.|++++...+ +.++|+++.+|.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 226 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDM 226 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCT
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCC
Confidence 7999999999999999999889999999999 999999999998776 677899998874
No 211
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.89 E-value=4.3e-09 Score=102.21 Aligned_cols=86 Identities=12% Similarity=0.096 Sum_probs=66.0
Q ss_pred CCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH
Q 016734 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (384)
Q Consensus 82 ~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~ 161 (384)
+.|... |--.+|+..+...+....+ ..+.+|||||||+|.+..+++++.++++|+|+|+|+++++.|+++++.
T Consensus 96 ~~l~~f-py~~~~~~l~~~E~~la~l------~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~ 168 (298)
T 3fpf_A 96 ETLRSF-YFYPRYLELLKNEAALGRF------RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG 168 (298)
T ss_dssp HHHHTS-TTHHHHHHHHHHHHHHTTC------CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred HhhccC-CCcccHHHHHHHHHHHcCC------CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh
Confidence 356655 7767777776644322111 245699999999997765655667899999999999999999999999
Q ss_pred CCCCCCceEEEEcCC
Q 016734 162 NPHISELIEIRKVDN 176 (384)
Q Consensus 162 n~~l~~~I~~~~~d~ 176 (384)
.+ + ++|+++.+|.
T Consensus 169 ~g-l-~~v~~v~gDa 181 (298)
T 3fpf_A 169 LG-V-DGVNVITGDE 181 (298)
T ss_dssp HT-C-CSEEEEESCG
T ss_pred cC-C-CCeEEEECch
Confidence 87 7 7899999874
No 212
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.89 E-value=2.7e-09 Score=103.68 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|..+..++...++.+|+|+|+|+.|++.|++|++.++ +++.++++|.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~ 84 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSY 84 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCG
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCH
Confidence 468999999999999999988878899999999999999999998875 4799999874
No 213
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.89 E-value=1.2e-08 Score=94.12 Aligned_cols=47 Identities=26% Similarity=0.176 Sum_probs=39.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n 162 (384)
...+|||||||+|.++..++...+ .+|+|+|+++.+++.|++++..+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcC
Confidence 356899999999998877775544 58999999999999999998654
No 214
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.89 E-value=1.7e-08 Score=99.40 Aligned_cols=61 Identities=16% Similarity=-0.033 Sum_probs=55.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+...++.++|+.+++++|+ +.+++.|++++...+ +.++|+++.+|..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLL 239 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEcccc
Confidence 356999999999999999999999999999999 999999999999887 7789999998853
No 215
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.88 E-value=6.7e-09 Score=96.08 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=48.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCc-HHHHHHH---HHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT-DVALEWA---EKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid-~~al~~A---~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...|+.+.++++|+|+|+| +.+++.| +++++..+ +. ++.++.+|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~~-~v~~~~~d~ 87 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-LS-NVVFVIAAA 87 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-CS-SEEEECCBT
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-CC-CeEEEEcCH
Confidence 458999999999999999887889999999999 5555555 88888776 54 588887764
No 216
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.87 E-value=1.7e-08 Score=97.66 Aligned_cols=60 Identities=17% Similarity=0.160 Sum_probs=52.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++...+ +.+|+|+|+|+.+++.|++|++.++ +.+ +.++.+|.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~~~-v~~~~~d~ 135 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IEN-VIFVCGDG 135 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCS-EEEEESCG
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC-eEEEECCh
Confidence 346899999999999999988776 4789999999999999999999987 664 99988874
No 217
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.87 E-value=3e-08 Score=85.85 Aligned_cols=52 Identities=15% Similarity=0.042 Sum_probs=42.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
...+|||+|||+|.++..++.... +++|+|+++.+++.|+++ . .++.++.+|
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---~----~~v~~~~~d 68 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK---F----DSVITLSDP 68 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH---C----TTSEEESSG
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh---C----CCcEEEeCC
Confidence 346899999999999988887663 999999999999999998 2 247776554
No 218
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.87 E-value=9e-09 Score=96.68 Aligned_cols=46 Identities=28% Similarity=0.233 Sum_probs=36.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCC-EEEEEeCcHHHHHHHHHHHHHC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~-~v~gvDid~~al~~A~~Ni~~n 162 (384)
...+|||||||+|.....++. .+. +|+|+|+|+.|++.|+++++.+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~--~~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAAC--DSFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGG--GTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCceEEEeCCCccHHHHHHHH--hhhcceeeccccHHHHHHHHHHHhcC
Confidence 346899999999976544443 333 7999999999999999998765
No 219
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.87 E-value=2e-08 Score=89.56 Aligned_cols=57 Identities=23% Similarity=0.211 Sum_probs=45.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||+|||+|.+...++. .++.+++|+|+|+.+++.|++++..++ .++.++.+|.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 80 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFV-EDGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDI 80 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHH-HTTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECch
Confidence 46899999999987444433 367899999999999999999998765 2577887764
No 220
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.87 E-value=2.3e-08 Score=94.64 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=37.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~ 161 (384)
...+|||||||+|... .++...++.+|+|+|+|+.|++.|+++++.
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhh
Confidence 3568999999999943 444444677999999999999999997754
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.86 E-value=9.9e-09 Score=93.33 Aligned_cols=61 Identities=16% Similarity=0.259 Sum_probs=51.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCC----CCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l----~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++... +..+|+|+|+++.+++.|++|+..++ + .+++.++.+|.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDG 142 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCG
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCc
Confidence 34689999999999998888775 45799999999999999999998865 3 34688888763
No 222
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.86 E-value=5.6e-09 Score=109.08 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=52.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhc---cCCEEEEEeCcHHHHHHHHHHHHHCCCCC-CceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~---~~~~v~gvDid~~al~~A~~Ni~~n~~l~-~~I~~~~~d~~ 177 (384)
...+|+|.|||||.+.+.++... ....++|+|+++.++..|+.|+..++ +. +.+.++++|..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gDtL 286 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNADTL 286 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCTT
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEeccee
Confidence 45699999999999887777664 35799999999999999999999987 64 46888888854
No 223
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.86 E-value=4.2e-09 Score=98.06 Aligned_cols=78 Identities=14% Similarity=0.021 Sum_probs=61.2
Q ss_pred CCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhh----ccCCEEEEEeCcHHHHHHHH
Q 016734 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGAS----LLGWSFVGSDMTDVALEWAE 156 (384)
Q Consensus 81 ~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~----~~~~~v~gvDid~~al~~A~ 156 (384)
.++.++..|+++..+..+.+.. ...+|||||||+|.++..|+.. .++.+|+|+|+++.+++.|+
T Consensus 59 ~~~~~~~~p~~~~~l~~~l~~~------------~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 59 RGLRMLKDPDTQAVYHDMLWEL------------RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp TTEECCSCHHHHHHHHHHHHHH------------CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred ccccccCCHHHHHHHHHHHHhc------------CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 3667777788877776666543 2358999999999999999876 46889999999999999887
Q ss_pred HHHHHCCCCCCceEEEEcCCC
Q 016734 157 KNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 157 ~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+ +.++|+++.+|..
T Consensus 127 ------~-~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 127 ------S-DMENITLHQGDCS 140 (236)
T ss_dssp ------G-GCTTEEEEECCSS
T ss_pred ------c-cCCceEEEECcch
Confidence 2 3357999998853
No 224
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=6.4e-09 Score=99.91 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=53.6
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccC--CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG--WSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~--~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~ 171 (384)
.+..+.+.+.. ....+|||||||+|.+...|+..... .+|+|+|+|+.+++.|+++. . +++++
T Consensus 30 i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~----~~v~~ 94 (279)
T 3uzu_A 30 VIDAIVAAIRP---------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G----ELLEL 94 (279)
T ss_dssp HHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G----GGEEE
T ss_pred HHHHHHHhcCC---------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C----CCcEE
Confidence 45556666643 13468999999999999999876542 45999999999999999994 2 36999
Q ss_pred EEcCCC
Q 016734 172 RKVDNS 177 (384)
Q Consensus 172 ~~~d~~ 177 (384)
+++|..
T Consensus 95 i~~D~~ 100 (279)
T 3uzu_A 95 HAGDAL 100 (279)
T ss_dssp EESCGG
T ss_pred EECChh
Confidence 999854
No 225
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.85 E-value=3.6e-08 Score=90.70 Aligned_cols=84 Identities=15% Similarity=0.249 Sum_probs=64.2
Q ss_pred EEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHH
Q 016734 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (384)
Q Consensus 76 ~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A 155 (384)
...+..+..+.. | ..+.++.+.+.. ....+|||||||+|.++..++...+ .+|+|+|+++.+++.|
T Consensus 65 ~~~~~~~~~~~~-~---~~~~~~~~~l~~---------~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a 130 (235)
T 1jg1_A 65 PLPIPAGQTVSA-P---HMVAIMLEIANL---------KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFA 130 (235)
T ss_dssp CEECSTTCEECC-H---HHHHHHHHHHTC---------CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHH
T ss_pred CcccCCCceecc-H---HHHHHHHHhcCC---------CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHH
Confidence 455566666554 3 344555566532 1345899999999999999988776 7999999999999999
Q ss_pred HHHHHHCCCCCCceEEEEcC
Q 016734 156 EKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 156 ~~Ni~~n~~l~~~I~~~~~d 175 (384)
++|++.++ +.+ +.++.+|
T Consensus 131 ~~~~~~~~-~~~-v~~~~~d 148 (235)
T 1jg1_A 131 KRNLERAG-VKN-VHVILGD 148 (235)
T ss_dssp HHHHHHTT-CCS-EEEEESC
T ss_pred HHHHHHcC-CCC-cEEEECC
Confidence 99999987 654 8888876
No 226
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.85 E-value=4.8e-09 Score=109.80 Aligned_cols=119 Identities=23% Similarity=0.276 Sum_probs=72.6
Q ss_pred CCCCCCCCCCCCCHHHHHhhCCCcccceeccCCCCccccCCCHHHHHHHHHHHhhccCCcEEEecCCCccCCCcCHHHHH
Q 016734 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYI 95 (384)
Q Consensus 16 mHprN~y~~~~~df~~La~~~p~l~~~v~~~~~g~~~idf~~~~av~~Lt~alL~~~fgl~~~vp~~~LiPrvP~r~~yi 95 (384)
-|..|.|...--+-..+.+..|+.=+-+.. ... | ..... -...+|+++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~pe~y~~i~~----~~~--~----------------------~~~~~---r~~~~r~~~i 53 (569)
T 4azs_A 5 HHHENLYFQGTKDLNTLVSELPEIYQTIFG----HPE--W----------------------DGDAA---RDCNQRLDLI 53 (569)
T ss_dssp ------------CHHHHHHHSSCCCBCCTT----CGG--G----------------------TTTCS---BCCHHHHHHH
T ss_pred cccccccccccccHHHHHhhCHHHHhhhcC----Chh--h----------------------ccccc---cchHHHHHHH
Confidence 367788887667888888887764332211 000 1 00000 1124577777
Q ss_pred HHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcC
Q 016734 96 HWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (384)
Q Consensus 96 ~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d 175 (384)
....+.+... -+++.+|||||||.|.++..||.. |++|+|+|+++.+++.|+..+..++.+ .|+++.++
T Consensus 54 ~~~~~~~~~~-------~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~ 122 (569)
T 4azs_A 54 TEQYDNLSRA-------LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDF--AAEFRVGR 122 (569)
T ss_dssp HHHHHHHHHH-------HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECC
T ss_pred HHHHHHHHhh-------cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECC
Confidence 6665554331 135679999999999999888864 889999999999999999999887622 48888876
Q ss_pred C
Q 016734 176 N 176 (384)
Q Consensus 176 ~ 176 (384)
.
T Consensus 123 ~ 123 (569)
T 4azs_A 123 I 123 (569)
T ss_dssp H
T ss_pred H
Confidence 3
No 227
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.84 E-value=2.6e-08 Score=89.72 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.++..++... +..+++|+|+++.+++.|++++..++ +. ++.++.+|.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 137 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-YD-NVIVIVGDG 137 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEESCG
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CeEEEECCc
Confidence 34689999999999999888876 55799999999999999999998876 54 488887763
No 228
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.84 E-value=1.8e-08 Score=98.02 Aligned_cols=145 Identities=12% Similarity=0.046 Sum_probs=92.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
..+|||+|||+|..+..++... +..+|+|+|+++.+++.+++|+++++ +. +|.++.+|..+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-~~-~v~~~~~D~~~~--------------- 165 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-VS-CCELAEEDFLAV--------------- 165 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCGGGS---------------
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-eEEEEeCChHhc---------------
Confidence 4589999999999999998875 35799999999999999999999998 64 589988874310
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
... ....++||.|+++||+-...... ..|....... +
T Consensus 166 -------------------------------------~~~-~~~~~~fD~Vl~D~PcSg~G~~~-r~pd~~~~~~----~ 202 (309)
T 2b9e_A 166 -------------------------------------SPS-DPRYHEVHYILLDPSCSGSGMPS-RQLEEPGAGT----P 202 (309)
T ss_dssp -------------------------------------CTT-CGGGTTEEEEEECCCCCC---------------------
T ss_pred -------------------------------------Ccc-ccccCCCCEEEEcCCcCCCCCCc-cCCChhhhcc----C
Confidence 000 00114799999999997553321 1122110000 0
Q ss_pred ccCc--h-HHHHHHHHHHHHHhhccCeEE-E--EEecCCCCHHHHHHHHHHcC
Q 016734 275 CSGG--E-RAFITRIIEDSVALKQTFRWY-T--SMVGRKSNLKFLISKLRKVG 321 (384)
Q Consensus 275 ~~GG--e-l~Fv~~ii~eS~~l~~~~~w~-t--~~vgk~~~l~~l~~~L~~~g 321 (384)
.... + ..+-.+|++.+..+++ +|.+ + |-+...++-..+...|+++.
T Consensus 203 ~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~ 254 (309)
T 2b9e_A 203 SPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNP 254 (309)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTST
T ss_pred CHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCC
Confidence 0000 1 2445678888877765 5543 2 33555677777888887764
No 229
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.83 E-value=3.4e-08 Score=100.56 Aligned_cols=60 Identities=15% Similarity=0.077 Sum_probs=52.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHH-------HHHHHHCCCCC-CceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA-------EKNVKSNPHIS-ELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A-------~~Ni~~n~~l~-~~I~~~~~d 175 (384)
...+|||||||+|.+++.++...+..+|+|+|+++.+++.| ++|++.++ +. ++|+++.+|
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~gD 309 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLKK 309 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEESS
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEcC
Confidence 45689999999999999998877667999999999999999 99999887 54 679998875
No 230
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.82 E-value=1.2e-07 Score=89.43 Aligned_cols=60 Identities=12% Similarity=0.059 Sum_probs=46.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH----------CC-----CCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS----------NP-----HISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~----------n~-----~l~~~I~~~~~d~~ 177 (384)
..+|||+|||+|..+..|+.. +++|+|+|+|+.|++.|++.... ++ ....+|+++++|..
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 468999999999998888865 78999999999999999876431 00 01246888888753
No 231
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.81 E-value=7.8e-09 Score=97.54 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=53.0
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
..+..+.+.+.. ....+|||||||+|.+...|+.. +..+|+|+|+|+.+++.|+++ . . .+++++
T Consensus 18 ~i~~~iv~~~~~---------~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-~----~~v~~i 81 (249)
T 3ftd_A 18 GVLKKIAEELNI---------EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-D----ERLEVI 81 (249)
T ss_dssp HHHHHHHHHTTC---------CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-C----TTEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-C----CCeEEE
Confidence 345566665532 23468999999999999888765 347999999999999999887 2 1 368999
Q ss_pred EcCCC
Q 016734 173 KVDNS 177 (384)
Q Consensus 173 ~~d~~ 177 (384)
++|..
T Consensus 82 ~~D~~ 86 (249)
T 3ftd_A 82 NEDAS 86 (249)
T ss_dssp CSCTT
T ss_pred Ecchh
Confidence 98864
No 232
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.81 E-value=4e-10 Score=105.12 Aligned_cols=57 Identities=12% Similarity=0.175 Sum_probs=47.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..|+... .+++|+|+|+.+++.|++|+.. .++++++.+|..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~----~~~v~~~~~D~~ 85 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL----NTRVTLIHQDIL 85 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT----CSEEEECCSCCT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc----CCceEEEECChh
Confidence 34589999999999998888763 7999999999999999888752 246888888753
No 233
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.81 E-value=3e-08 Score=87.71 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=95.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccC---------CEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE-EcCCCCCCCcccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLG---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNSESTPSIQE 185 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~---------~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~-~~d~~~~~p~~~~ 185 (384)
..+|||||||+|.++..|+...+. .+|+|+|+++.+ . + .++.++ .+|..+ ..
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~--~~--- 84 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTD--PR--- 84 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTS--HH---
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCC--HH---
Confidence 468999999999999999988654 799999999831 1 2 246776 555321 00
Q ss_pred cccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccc
Q 016734 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTS 265 (384)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~ 265 (384)
... .+...+ .+++||+|+||+++........
T Consensus 85 ----------------------------------~~~-------~~~~~~--~~~~fD~V~~~~~~~~~~~~~~------ 115 (196)
T 2nyu_A 85 ----------------------------------TSQ-------RILEVL--PGRRADVILSDMAPNATGFRDL------ 115 (196)
T ss_dssp ----------------------------------HHH-------HHHHHS--GGGCEEEEEECCCCCCCSCHHH------
T ss_pred ----------------------------------HHH-------HHHHhc--CCCCCcEEEeCCCCCCCCCccc------
Confidence 000 000001 2357999999986543211000
Q ss_pred cCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC---eeEEEEEE
Q 016734 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAW 342 (384)
Q Consensus 266 ~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~~AW 342 (384)
..+ ........+++++.++++++|++.+..........+...++.. +..+.+.+...++ ..+++++-
T Consensus 116 ----~~~-----~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~~e~~~v~~ 185 (196)
T 2nyu_A 116 ----DHD-----RLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKESSEVYFLAT 185 (196)
T ss_dssp ----HHH-----HHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC--------EEEEEE
T ss_pred ----CHH-----HHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccCceEEEEee
Confidence 000 0134456788888889999999887766566778888888764 6667777665554 35677776
Q ss_pred ecCC
Q 016734 343 SFVP 346 (384)
Q Consensus 343 sf~~ 346 (384)
-|..
T Consensus 186 g~~~ 189 (196)
T 2nyu_A 186 QYHG 189 (196)
T ss_dssp EECC
T ss_pred ecCC
Confidence 6654
No 234
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.80 E-value=7e-08 Score=86.65 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~N 158 (384)
...+|||||||+|.+...++.. +.+++|+|+++.+++.|+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~ 73 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEK 73 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTT
T ss_pred CCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh
Confidence 3568999999999999888876 58999999999999998765
No 235
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.78 E-value=2.4e-07 Score=86.71 Aligned_cols=131 Identities=11% Similarity=0.024 Sum_probs=86.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~ 193 (384)
...+|||+|||+|.....++... +..+|+|+|+++.+++...+.++... +|.++.+|... |
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~----nv~~i~~Da~~--~------------ 137 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP----NIFPLLADARF--P------------ 137 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT----TEEEEECCTTC--G------------
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC----CeEEEEccccc--c------------
Confidence 34689999999999988888764 46799999999999866555554432 48888887532 0
Q ss_pred cccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccc
Q 016734 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (384)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~ 273 (384)
..+.. ..++||+|+||-|.-.
T Consensus 138 ------------------------------------~~~~~---~~~~~D~I~~d~a~~~-------------------- 158 (232)
T 3id6_C 138 ------------------------------------QSYKS---VVENVDVLYVDIAQPD-------------------- 158 (232)
T ss_dssp ------------------------------------GGTTT---TCCCEEEEEECCCCTT--------------------
T ss_pred ------------------------------------hhhhc---cccceEEEEecCCChh--------------------
Confidence 00111 1358999999965310
Q ss_pred cccCchHHHHHHHHHHHHHhhccCeEEEEEec---------CCCCHHHHHHHHHHcCCeEEEEEEe
Q 016734 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVG---------RKSNLKFLISKLRKVGVTIVKTTEF 330 (384)
Q Consensus 274 ~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg---------k~~~l~~l~~~L~~~g~~~v~~~e~ 330 (384)
-...+...+..+++.+|++...+- .....+...+.|++.||+.+++..+
T Consensus 159 --------~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 159 --------QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp --------HHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEEC
T ss_pred --------HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 011122334446777887755431 2334577888999999988877765
No 236
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.76 E-value=3.4e-09 Score=100.31 Aligned_cols=70 Identities=10% Similarity=-0.041 Sum_probs=51.1
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
..+.++.+.+.. ....+|||||||+|.+.. ++ +....+|+|+|+|+.+++.|++++..+ ++++++
T Consensus 8 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i 72 (252)
T 1qyr_A 8 FVIDSIVSAINP---------QKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG----PKLTIY 72 (252)
T ss_dssp HHHHHHHHHHCC---------CTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC----CceEEE
Confidence 345666666642 134589999999999988 64 332223999999999999999887543 369999
Q ss_pred EcCCC
Q 016734 173 KVDNS 177 (384)
Q Consensus 173 ~~d~~ 177 (384)
++|..
T Consensus 73 ~~D~~ 77 (252)
T 1qyr_A 73 QQDAM 77 (252)
T ss_dssp CSCGG
T ss_pred ECchh
Confidence 88853
No 237
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.76 E-value=5.9e-08 Score=88.31 Aligned_cols=82 Identities=20% Similarity=0.148 Sum_probs=60.0
Q ss_pred EEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHH
Q 016734 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (384)
Q Consensus 76 ~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A 155 (384)
.+.+..+..+.. | ..+.++.+.+.. ....+|||||||+|.++..++... .+++|+|+++.+++.|
T Consensus 44 ~~~~~~~~~~~~-~---~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a 108 (231)
T 1vbf_A 44 ALPILPGINTTA-L---NLGIFMLDELDL---------HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYA 108 (231)
T ss_dssp CEEEETTEEECC-H---HHHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHH
T ss_pred ceeeCCCCccCC-H---HHHHHHHHhcCC---------CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHH
Confidence 344445544433 2 345555565532 234589999999999998888764 7999999999999999
Q ss_pred HHHHHHCCCCCCceEEEEcCC
Q 016734 156 EKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 156 ~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
++++..++ ++.++.+|.
T Consensus 109 ~~~~~~~~----~v~~~~~d~ 125 (231)
T 1vbf_A 109 SKLLSYYN----NIKLILGDG 125 (231)
T ss_dssp HHHHTTCS----SEEEEESCG
T ss_pred HHHHhhcC----CeEEEECCc
Confidence 99997664 688888763
No 238
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.75 E-value=1.2e-07 Score=86.06 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=37.7
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++.. +|+|+++.+++.|+++ ++.++.+|.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~---------~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR---------GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT---------TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc---------CCEEEEccc
Confidence 458999999999988777643 9999999999999887 266777764
No 239
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.74 E-value=5.4e-08 Score=87.92 Aligned_cols=61 Identities=11% Similarity=-0.023 Sum_probs=48.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHH----HHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV----KSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni----~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.++..|+...|+.+|+|+|+++.+++.+.+++ ...+ +. ++.++.+|..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~~-~v~~~~~d~~ 91 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-LP-NLLYLWATAE 91 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-CT-TEEEEECCST
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-CC-ceEEEecchh
Confidence 346899999999999999999888999999999999888644443 3343 33 6899988753
No 240
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.74 E-value=2e-07 Score=84.58 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=43.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++...+ +++|+|+++.+++.|+++. .++.++.+|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~ 92 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-------PDATLHQGDM 92 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-------TTCEEEECCT
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-------CCCEEEECCH
Confidence 46899999999999988887754 8999999999999998874 1477887764
No 241
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=7.4e-08 Score=93.16 Aligned_cols=144 Identities=13% Similarity=0.036 Sum_probs=94.5
Q ss_pred CCCeEEEECCcc------cHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE-EEcCCCCCCCccccc
Q 016734 115 DKVKGFDIGTGA------NCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEI-RKVDNSESTPSIQES 186 (384)
Q Consensus 115 ~~~~vLDIGtGs------G~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~-~~~d~~~~~p~~~~~ 186 (384)
...+|||+|||+ |. ..++...+ +.+|+|+|+++. + .++++ +++|..+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-------~~v~~~i~gD~~~-------- 117 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-------SDADSTLIGDCAT-------- 117 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-------CSSSEEEESCGGG--------
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-------CCCEEEEECcccc--------
Confidence 345899999944 76 34555555 689999999987 1 13667 8877421
Q ss_pred ccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCcccc
Q 016734 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC 266 (384)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~ 266 (384)
+ . ..++||+|+||++....... . .
T Consensus 118 ---------------------------------------------~-~---~~~~fD~Vvsn~~~~~~g~~-~------~ 141 (290)
T 2xyq_A 118 ---------------------------------------------V-H---TANKWDLIISDMYDPRTKHV-T------K 141 (290)
T ss_dssp ---------------------------------------------C-C---CSSCEEEEEECCCCCC---C-C------S
T ss_pred ---------------------------------------------C-C---ccCcccEEEEcCCccccccc-c------c
Confidence 0 0 12579999999742111000 0 0
Q ss_pred CCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEEEecCC
Q 016734 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346 (384)
Q Consensus 267 ~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~AWsf~~ 346 (384)
. .. ..+.++..+++++.++++.+|+|.+.+-......++.+.|++.||..++++.........++++..|..
T Consensus 142 d-~~-------~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~~~~ 213 (290)
T 2xyq_A 142 E-ND-------SKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGANYLG 213 (290)
T ss_dssp C-CC-------CCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEEECS
T ss_pred c-cc-------chHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCCccC
Confidence 0 00 024567889999999999999998866556677899999999998777766212222366777777764
Q ss_pred c
Q 016734 347 P 347 (384)
Q Consensus 347 ~ 347 (384)
.
T Consensus 214 ~ 214 (290)
T 2xyq_A 214 K 214 (290)
T ss_dssp S
T ss_pred C
Confidence 4
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.70 E-value=3.5e-08 Score=94.38 Aligned_cols=101 Identities=10% Similarity=0.042 Sum_probs=71.6
Q ss_pred ccCCCHHHHHHHHHHHhhccCCcEEEecCCCccCCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHH
Q 016734 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132 (384)
Q Consensus 53 idf~~~~av~~Lt~alL~~~fgl~~~vp~~~LiPrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~ 132 (384)
.|+.|+.+++...+.+|... +.|..-+..+.++..... .. -..+.+|||||||.|.+++.
T Consensus 90 ~~~~d~~~~~~~~~~~l~~H----------------~STreRLp~lD~fY~~i~-~~---i~~p~~VLDLGCG~GpLAl~ 149 (281)
T 3lcv_B 90 VDAGDDEAVRAALLRAMSVH----------------ISTRERLPHLDEFYRELF-RH---LPRPNTLRDLACGLNPLAAP 149 (281)
T ss_dssp HTTTCHHHHHHHHHHHHTTS----------------HHHHHHGGGHHHHHHHHG-GG---SCCCSEEEETTCTTGGGCCT
T ss_pred cccCChHHHHHHHHHHHhcC----------------CCHHHHhHhHHHHHHHHH-hc---cCCCceeeeeccCccHHHHH
Confidence 47889999887777666332 333333333333322100 00 02356999999999999988
Q ss_pred HHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 133 La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
++...+..+++|+|||+.+++.+++|+..++ +. ..+...|.
T Consensus 150 ~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-~~--~~~~v~D~ 190 (281)
T 3lcv_B 150 WMGLPAETVYIASDIDARLVGFVDEALTRLN-VP--HRTNVADL 190 (281)
T ss_dssp TTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-CC--EEEEECCT
T ss_pred HHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CC--ceEEEeee
Confidence 8877789999999999999999999999998 54 66666764
No 243
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.69 E-value=6.2e-08 Score=96.60 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=36.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~N 158 (384)
...+|||||||+|.+...++.. +++++|+|+|+.+++.|+++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc
Confidence 3569999999999998888754 67999999999999999876
No 244
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.68 E-value=7.9e-08 Score=90.96 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCCcCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCC
Q 016734 86 PTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI 165 (384)
Q Consensus 86 PrvP~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l 165 (384)
|..| ..+++|+.+... ...+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++ +
T Consensus 23 p~yp--~~l~~~l~~~~~-----------~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~----~--- 80 (257)
T 4hg2_A 23 PRYP--RALFRWLGEVAP-----------ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR----H--- 80 (257)
T ss_dssp CCCC--HHHHHHHHHHSS-----------CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC----C---
T ss_pred CCcH--HHHHHHHHHhcC-----------CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh----c---
Confidence 5545 345667766542 2458999999999998888754 4699999999999987753 2
Q ss_pred CCceEEEEcCC
Q 016734 166 SELIEIRKVDN 176 (384)
Q Consensus 166 ~~~I~~~~~d~ 176 (384)
.+|.++.++.
T Consensus 81 -~~v~~~~~~~ 90 (257)
T 4hg2_A 81 -PRVTYAVAPA 90 (257)
T ss_dssp -TTEEEEECCT
T ss_pred -CCceeehhhh
Confidence 2588888874
No 245
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.68 E-value=1.8e-07 Score=89.10 Aligned_cols=46 Identities=11% Similarity=-0.017 Sum_probs=40.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n 162 (384)
...+|||||||+|.++..|+.+ +.+|+|+|+|+.|++.|++|+..+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc
Confidence 3468999999999999888865 679999999999999999998654
No 246
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.66 E-value=5.2e-07 Score=85.61 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=41.3
Q ss_pred CCCeEEEECCcccHHHHH----HHhhccCCEE--EEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 115 DKVKGFDIGTGANCIYPL----LGASLLGWSF--VGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~----La~~~~~~~v--~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
...+|||||||+|.+... ++.+.+++.+ +|+|+|+.|++.|++.+.....+ ..+.+.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~ 114 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFA 114 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEE
Confidence 346899999999976543 3344577755 99999999999999998754213 245544
No 247
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.64 E-value=1.5e-07 Score=85.98 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=49.3
Q ss_pred CCeEEEECCcccHHHHHHHhhcc------CCEEEEEeCcHHHHHHHHHHHHHCCCC----CCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLL------GWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~------~~~v~gvDid~~al~~A~~Ni~~n~~l----~~~I~~~~~d~ 176 (384)
..+|||||||+|.++..++.... ..+|+|+|+++.+++.|++|+..++ + .+++.++.+|.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDG 154 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCc
Confidence 45899999999999988887654 3699999999999999999998753 1 24688888763
No 248
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=8.9e-08 Score=87.88 Aligned_cols=56 Identities=23% Similarity=0.271 Sum_probs=46.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+...|+...+ +|+|+|+|+.+++.|+++... .++.++.+|..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d~~ 111 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA-----ANISYRLLDGL 111 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC-----TTEEEEECCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc-----cCceEEECccc
Confidence 346899999999999999987655 899999999999999998721 25899988754
No 249
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.63 E-value=4.1e-07 Score=87.07 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=48.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCC-----CCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH-----ISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~-----l~~~I~~~~~d~~ 177 (384)
...+|||||||+|.+...++. .+..+++|+|+++.+++.|+++....+. ...++.++.+|..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~ 100 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSS 100 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTT
T ss_pred CCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccc
Confidence 346899999999998877775 4577999999999999999999876420 1236888888753
No 250
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.63 E-value=1.1e-07 Score=91.08 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=37.9
Q ss_pred CCeEEEECCcccH----HHHHHHhhcc----CCEEEEEeCcHHHHHHHHHHH
Q 016734 116 KVKGFDIGTGANC----IYPLLGASLL----GWSFVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 116 ~~~vLDIGtGsG~----I~~~La~~~~----~~~v~gvDid~~al~~A~~Ni 159 (384)
..+|+|+|||||. |+..|+...+ +++|+|+|||+.||+.|++++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 4799999999998 6666776544 589999999999999999986
No 251
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.63 E-value=9.7e-08 Score=89.00 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=45.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++...++.+++|+|+++.+++.|+++. .++.++.+|.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 139 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASS 139 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcch
Confidence 46899999999999988888777889999999999999998864 1367777763
No 252
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.62 E-value=1.9e-08 Score=95.75 Aligned_cols=58 Identities=10% Similarity=0.091 Sum_probs=46.2
Q ss_pred CeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC---CC----CCCceEEEEcCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---PH----ISELIEIRKVDN 176 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n---~~----l~~~I~~~~~d~ 176 (384)
.+|||+|||+|..++.++.+ +.+|+++|+++.+++.+++|++.. .. +.++|+++++|.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 58999999999999998876 668999999999888888876532 11 124799998873
No 253
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.61 E-value=3e-07 Score=99.83 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=60.6
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHC-----
Q 016734 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN----- 162 (384)
Q Consensus 89 P~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n----- 162 (384)
|.....+.++.+++... ...+|||||||+|.++..|+... +..+|+|+|+|+.+++.|++++...
T Consensus 704 PL~eqRle~LLelL~~~---------~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr 774 (950)
T 3htx_A 704 PLSKQRVEYALKHIRES---------SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEA 774 (950)
T ss_dssp CHHHHHHHHHHHHHHHS---------CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTC
T ss_pred hHHHHHHHHHHHHhccc---------CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhh
Confidence 45556677777777542 35689999999999998888766 4579999999999999999977532
Q ss_pred -CCCCCceEEEEcCCC
Q 016734 163 -PHISELIEIRKVDNS 177 (384)
Q Consensus 163 -~~l~~~I~~~~~d~~ 177 (384)
+ + .+|+++++|..
T Consensus 775 ~g-l-~nVefiqGDa~ 788 (950)
T 3htx_A 775 CN-V-KSATLYDGSIL 788 (950)
T ss_dssp SS-C-SEEEEEESCTT
T ss_pred cC-C-CceEEEECchH
Confidence 2 2 36999988853
No 254
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.56 E-value=1.1e-06 Score=83.61 Aligned_cols=58 Identities=12% Similarity=0.070 Sum_probs=49.1
Q ss_pred CCeEEEECCcc---cHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGs---G~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|||||||+ |.+...+....++.+|+|+|+|+.+++.|++++..+ +++.++.+|..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~ 138 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVR 138 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCC
Confidence 35899999999 988766666678999999999999999999998543 46999999864
No 255
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.56 E-value=2.9e-07 Score=82.33 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=40.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCC-EEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~-~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...+ +. +++|+|+++.+++.|+++. .++.++.+|.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 86 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWG 86 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCT
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEccc
Confidence 3568999999999876555 56 9999999999999999886 2467776653
No 256
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.53 E-value=4.6e-07 Score=88.44 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=45.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.++++.+++++|++ .++. +++++..+ +.++|+++.+|.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~-~~~~v~~~~~d~ 241 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPD-VAGRWKVVEGDF 241 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGG-GTTSEEEEECCT
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccC-CCCCeEEEecCC
Confidence 3569999999999999999999999999999994 4444 33443344 567899988874
No 257
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.47 E-value=7.1e-07 Score=83.04 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=37.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~ 160 (384)
..+|||||||+|.++..++.. +.+++|+|+|+.+++.|+++..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC
Confidence 458999999999998888765 6799999999999999998753
No 258
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.45 E-value=1.1e-06 Score=84.76 Aligned_cols=59 Identities=12% Similarity=-0.106 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCC-----ceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE-----LIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~-----~I~~~~~d~ 176 (384)
..+|||||||+|.....++. ...++|+|+|+|+.|++.|++.....+ +.. .+++...+.
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhc
Confidence 46899999999964433433 345799999999999999999887654 321 256666654
No 259
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.44 E-value=8.5e-07 Score=92.30 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=50.5
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-------------cCCEEEEEeCcHHHHHHHHHHHH
Q 016734 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 94 yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-------------~~~~v~gvDid~~al~~A~~Ni~ 160 (384)
.+..+.+++.. ....+|+|.+||||.+.+...... ....++|+|+++.++..|+.|+.
T Consensus 205 Vv~lmv~l~~p---------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 205 VVRFMVEVMDP---------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp HHHHHHHHHCC---------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHhhcc---------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 45555566542 234589999999999866554322 13579999999999999999998
Q ss_pred HCCCCCCceEEEEcCC
Q 016734 161 SNPHISELIEIRKVDN 176 (384)
Q Consensus 161 ~n~~l~~~I~~~~~d~ 176 (384)
.++ .. ...+..+|.
T Consensus 276 lhg-~~-~~~I~~~dt 289 (530)
T 3ufb_A 276 LHG-LE-YPRIDPENS 289 (530)
T ss_dssp HHT-CS-CCEEECSCT
T ss_pred hcC-Cc-ccccccccc
Confidence 887 43 234555553
No 260
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.44 E-value=1.7e-06 Score=77.61 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=72.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCccccc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~~ 195 (384)
..+|||||||+|.++..+ ..+++|+|+++. ++.++.+|..+
T Consensus 68 ~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~-----------------~~~~~~~d~~~----------------- 108 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI-----RNPVHCFDLASL-----------------DPRVTVCDMAQ----------------- 108 (215)
T ss_dssp TSCEEEETCTTCHHHHHC-----CSCEEEEESSCS-----------------STTEEESCTTS-----------------
T ss_pred CCeEEEECCcCCHHHHHh-----hccEEEEeCCCC-----------------CceEEEecccc-----------------
Confidence 468999999999987665 268999999986 14455665321
Q ss_pred cccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCcccccc
Q 016734 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~ 275 (384)
+...+++||+|+|+..++. . +
T Consensus 109 ---------------------------------------~~~~~~~fD~v~~~~~l~~--~--------------~---- 129 (215)
T 2zfu_A 109 ---------------------------------------VPLEDESVDVAVFCLSLMG--T--------------N---- 129 (215)
T ss_dssp ---------------------------------------CSCCTTCEEEEEEESCCCS--S--------------C----
T ss_pred ---------------------------------------CCCCCCCEeEEEEehhccc--c--------------C----
Confidence 0002468999999876531 0 0
Q ss_pred cCchHHHHHHHHHHHHHhhccCeEEEE-Eec-CCCCHHHHHHHHHHcCCeEEE
Q 016734 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVG-RKSNLKFLISKLRKVGVTIVK 326 (384)
Q Consensus 276 ~GGel~Fv~~ii~eS~~l~~~~~w~t~-~vg-k~~~l~~l~~~L~~~g~~~v~ 326 (384)
...++++..++++.+|++.. ... ...+...+.+.|++.|+..+.
T Consensus 130 -------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 130 -------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred -------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 23455666677788887644 333 234789999999999997655
No 261
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.42 E-value=2.4e-06 Score=84.38 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.++|+.+++++|+ +.+++.|+++ .+|+++.+|.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~ 255 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDM 255 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCC
Confidence 356999999999999999999999999999999 8888776531 3699988874
No 262
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.42 E-value=2.6e-06 Score=83.83 Aligned_cols=53 Identities=19% Similarity=0.058 Sum_probs=44.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.+.++.+++++|+ +.+++.|++ . .+|+++.+|.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~ 261 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-------L-SGIEHVGGDM 261 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------C-TTEEEEECCT
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-------c-CCCEEEeCCc
Confidence 356999999999999999999999999999999 889887753 1 2588888774
No 263
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.40 E-value=9.5e-07 Score=83.53 Aligned_cols=57 Identities=14% Similarity=-0.045 Sum_probs=48.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.+.+|||||||+|.+++.+. +..+++|+|||+.+++.|++++..++ . ...+..+|..
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g-~--~~~~~v~D~~ 161 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD-W--DFTFALQDVL 161 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT-C--EEEEEECCTT
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC-C--CceEEEeecc
Confidence 46799999999999876655 88899999999999999999999986 3 4677777743
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.39 E-value=2.8e-06 Score=82.94 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=44.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++.++|+.+++++|+ +.+++.|++ . .+|+++.+|.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~ 240 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----S----NNLTYVGGDM 240 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----B----TTEEEEECCT
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc----C----CCcEEEeccc
Confidence 46899999999999999999999999999999 999887754 1 2488888764
No 265
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.33 E-value=1.5e-05 Score=78.24 Aligned_cols=59 Identities=17% Similarity=0.056 Sum_probs=51.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|+|||||+|.+...+++++|+.+++..|. |.+++.|++++... ..++|+++.+|..
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~--~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ--EEEQIDFQEGDFF 238 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTT
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc--ccCceeeecCccc
Confidence 45899999999999999999999999999998 78999999998654 4679999998854
No 266
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.32 E-value=1.2e-06 Score=83.14 Aligned_cols=59 Identities=5% Similarity=-0.273 Sum_probs=46.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH--CCCCCCceEEEEcC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHISELIEIRKVD 175 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~--n~~l~~~I~~~~~d 175 (384)
.+.+|||||||+|.++..++.. + .+++++|+|+.+++.|++++.. ++.-..+++++.+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D 132 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQL 132 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSG
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEech
Confidence 3469999999999998878766 6 8999999999999999987642 11012478887665
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.26 E-value=7.9e-06 Score=79.85 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=43.0
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
..+|||||||+|.+...++.++|+.+++++|+ +.+++.|++ + .+|+++.+|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~ 245 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------N-ENLNFVGGDM 245 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-------C-SSEEEEECCT
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-------C-CCcEEEeCcc
Confidence 46899999999999999999999999999999 788876653 2 2488888764
No 268
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.24 E-value=2.8e-07 Score=85.79 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=36.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni 159 (384)
...+|||||||+|.++..|++. ...+|+|+|+++.+++.|+++.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC
Confidence 3458999999999998888765 2249999999999999987753
No 269
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.23 E-value=9.2e-06 Score=80.09 Aligned_cols=53 Identities=15% Similarity=0.010 Sum_probs=45.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+|||||||+|.+...++.++|+.+++++|+ +.+++.|++ .++|+++.+|.
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~D~ 253 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ--------FPGVTHVGGDM 253 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh--------cCCeEEEeCCc
Confidence 356999999999999999999999999999999 888776653 14799998874
No 270
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.18 E-value=1.5e-06 Score=83.12 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=27.3
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..+|||||||+|..+..++.+ .+|+|+|+++
T Consensus 83 g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~ 113 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT 113 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHc---CCEEEEECch
Confidence 468999999999998888765 5899999998
No 271
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.13 E-value=6.7e-06 Score=79.48 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=34.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
...+|||||||+|.+...|++. ...+|+|+|+++.+++.|.+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHH
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHH
Confidence 3468999999999998777754 34599999999999998644
No 272
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.09 E-value=1.3e-06 Score=83.03 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=27.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..+|||||||+|..+..++.. .+|+|+|+++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~ 105 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT 105 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHc---CcEEEEECch
Confidence 468999999999988777765 5899999998
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.06 E-value=1.1e-05 Score=85.75 Aligned_cols=61 Identities=7% Similarity=-0.040 Sum_probs=47.4
Q ss_pred CCCeEEEECCcccHHHH---HHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYP---LLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~---~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+...|||+|||+|.+.. ..+++. ...+|+|||.++. ...|++.++.|+ +.++|+++++|..
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~-~~dkVtVI~gd~e 421 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE-WGSQVTVVSSDMR 421 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT-TGGGEEEEESCTT
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc-CCCeEEEEeCcce
Confidence 44689999999998743 333332 2347899999985 567899999998 9999999999864
No 274
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.99 E-value=9.7e-06 Score=81.84 Aligned_cols=52 Identities=19% Similarity=0.105 Sum_probs=39.8
Q ss_pred CCCeEEEECCc------ccHHHHHHHhh-ccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTG------ANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtG------sG~I~~~La~~-~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.+.+||||||| +|..++.++.+ +++.+|+|+|+++.+. . ...+|+++++|..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~---~~~rI~fv~GDa~ 274 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V---DELRIRTIQGDQN 274 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G---CBTTEEEEECCTT
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h---cCCCcEEEEeccc
Confidence 45799999999 66666666665 4789999999999872 1 2347999999854
No 275
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.82 E-value=1.6e-05 Score=69.58 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=30.9
Q ss_pred CCeEEEECCccc-HHHHHHHhhccCCEEEEEeCcHHHHH
Q 016734 116 KVKGFDIGTGAN-CIYPLLGASLLGWSFVGSDMTDVALE 153 (384)
Q Consensus 116 ~~~vLDIGtGsG-~I~~~La~~~~~~~v~gvDid~~al~ 153 (384)
+.++||||||+| -++..|+.. .+..|+||||++.|++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc
Confidence 469999999999 488888753 6789999999987755
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.78 E-value=0.0002 Score=65.60 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=48.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCC--CCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI--SELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l--~~~I~~~~~d~~ 177 (384)
..+|||+|||.+.+ .+|. .++.+|+.+|.|++..+.|++|+++++ + .++|+++.++..
T Consensus 31 a~~VLEiGtGySTl--~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 31 AEVILEYGSGGSTV--VAAE-LPGKHVTSVESDRAWARMMKAWLAANP-PAEGTEVNIVWTDIG 90 (202)
T ss_dssp CSEEEEESCSHHHH--HHHT-STTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCEEEEEECCCS
T ss_pred CCEEEEECchHHHH--HHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCceEEEEeCch
Confidence 35899999985444 3443 447899999999999999999999998 7 789999999854
No 277
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.74 E-value=6.8e-05 Score=71.97 Aligned_cols=60 Identities=18% Similarity=0.144 Sum_probs=47.6
Q ss_pred CeEEEECCcc---cHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGs---G~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++||||||. |.+..++....|+++|+++|.|+.|++.|+..+..++ ..++.++++|..+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~~ 142 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADMLD 142 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEecccC
Confidence 5899999996 4454444445689999999999999999999987543 3579999999753
No 278
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.66 E-value=2.3e-05 Score=75.82 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=25.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDi 147 (384)
..+|||||||+|.....++.+ .+|+|+|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~ 111 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKG 111 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEec
Confidence 468999999999998888765 47999999
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.60 E-value=5.4e-05 Score=80.96 Aligned_cols=60 Identities=13% Similarity=-0.033 Sum_probs=45.2
Q ss_pred CCeEEEECCcccHHHHH--HHhhc-----------cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPL--LGASL-----------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~--La~~~-----------~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...|||+|||+|.+... -|.+. ...+|+|||.++.|+..++.... |+ ++++|+++++|..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng-~~d~VtVI~gd~e 482 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT-WKRRVTIIESDMR 482 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT-TTTCSEEEESCGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC-CCCeEEEEeCchh
Confidence 45899999999998632 22221 23499999999988876666554 76 8999999999854
No 280
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.58 E-value=0.00011 Score=70.67 Aligned_cols=53 Identities=13% Similarity=-0.012 Sum_probs=46.1
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...+||.+||.|.-+..|+.+ +.+|+|+|.|+.|++.|++ ++. +++.+++++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f 75 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNF 75 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCG
T ss_pred CCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCc
Confidence 468999999999999888876 6799999999999999998 643 4799999874
No 281
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.57 E-value=0.0002 Score=68.53 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n 162 (384)
+.++..+..+... ....|||++||||.+++.++. .+.+++|+|+++.+++.|++|++..
T Consensus 222 ~~l~~~~i~~~~~----------~~~~vlD~f~GsGt~~~~a~~--~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 222 LELAERLVRMFSF----------VGDVVLDPFAGTGTTLIAAAR--WGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHHCC----------TTCEEEETTCTTTHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC----------CCCEEEECCCCCCHHHHHHHH--cCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 5566666665532 345899999999999766553 4679999999999999999999765
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.51 E-value=0.00032 Score=60.80 Aligned_cols=113 Identities=8% Similarity=-0.058 Sum_probs=72.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCCCCCcccccccCCcccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~~~p~~~~~~~~~~~~~ 194 (384)
...+|||||||. +++|+++.+++.|+++... .+.++.+|..+
T Consensus 12 ~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~------~~~~~~~d~~~---------------- 53 (176)
T 2ld4_A 12 AGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN------EGRVSVENIKQ---------------- 53 (176)
T ss_dssp TTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT------TSEEEEEEGGG----------------
T ss_pred CCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc------CcEEEEechhc----------------
Confidence 356899999996 2499999999999987532 37787776421
Q ss_pred ccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCCCccccc
Q 016734 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (384)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~ 274 (384)
+ -+.++ .+++||+|+|+=-+... . .+
T Consensus 54 -------------------------~----------~~~~~--~~~~fD~V~~~~~l~~~------~--------~~--- 79 (176)
T 2ld4_A 54 -------------------------L----------LQSAH--KESSFDIILSGLVPGST------T--------LH--- 79 (176)
T ss_dssp -------------------------G----------GGGCC--CSSCEEEEEECCSTTCC------C--------CC---
T ss_pred -------------------------C----------ccccC--CCCCEeEEEECChhhhc------c--------cC---
Confidence 0 00001 35789999998322210 0 00
Q ss_pred ccCchHHHHHHHHHHHHHhhccCeEEEEEec---------CCCCHHHHHHHHHHcCCeEEEEEE
Q 016734 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVG---------RKSNLKFLISKLRKVGVTIVKTTE 329 (384)
Q Consensus 275 ~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vg---------k~~~l~~l~~~L~~~g~~~v~~~e 329 (384)
...++++..++++++|++.+... ...+..++.+.|++.|+ +.+.+
T Consensus 80 --------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf--i~~~~ 133 (176)
T 2ld4_A 80 --------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL--VEVKE 133 (176)
T ss_dssp --------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC--EEEEE
T ss_pred --------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC--cEeec
Confidence 14556677778888888765321 11237899999999999 44443
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.43 E-value=0.00055 Score=67.91 Aligned_cols=146 Identities=8% Similarity=0.038 Sum_probs=93.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCC-----CceEEEEcCCCCCCCcccccccC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-----ELIEIRKVDNSESTPSIQESLTG 189 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~-----~~I~~~~~d~~~~~p~~~~~~~~ 189 (384)
...+|||+|+|.|.=...|+....+..++|+|+++.-++..++|+++.+ .. ..|.+...|...
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~-~~~~~~~~~v~v~~~D~~~----------- 215 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYV-PEEIRDGNQVRVTSWDGRK----------- 215 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHS-CTTTTTSSSEEEECCCGGG-----------
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhh-hhhhccCCceEEEeCchhh-----------
Confidence 3458999999999988888877666689999999999999999999875 32 345655544210
Q ss_pred CccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhh-hccCCccccCC
Q 016734 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE-AGLNPKTSCGG 268 (384)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~-~~~~p~~~~~g 268 (384)
+... ..+.||.|++.+|=-.+.-. ...+|.....-
T Consensus 216 ------------------------------------------~~~~--~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~ 251 (359)
T 4fzv_A 216 ------------------------------------------WGEL--EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRS 251 (359)
T ss_dssp ------------------------------------------HHHH--STTCEEEEEEECCCCCHHHHTTCCTTCTTSGG
T ss_pred ------------------------------------------cchh--ccccCCEEEECCccCCCCCcccccChhhhhhC
Confidence 1111 35689999999996432111 11223221110
Q ss_pred CcccccccCchH-HHHHHHHHHHHHhhccCeEE---EEEecCCCCHHHHHHHHHHc
Q 016734 269 TPEEMVCSGGER-AFITRIIEDSVALKQTFRWY---TSMVGRKSNLKFLISKLRKV 320 (384)
Q Consensus 269 ~~~E~~~~GGel-~Fv~~ii~eS~~l~~~~~w~---t~~vgk~~~l~~l~~~L~~~ 320 (384)
...+. -.+ .+=.+|++.+..+++.+|.+ ||-+...++-.-|...|+++
T Consensus 252 ~~~~~----~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 252 RKKER----QILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp GHHHH----HTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred CHHHH----HHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 11000 012 23456888888888887743 56666677777777777654
No 284
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.28 E-value=0.00022 Score=68.62 Aligned_cols=143 Identities=14% Similarity=0.144 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEE
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~ 171 (384)
..|+..|..+ . ...+||+=+|||.|++.+.+ .+-+++.+|.++.+++.-++|++. .+++++
T Consensus 81 ~~yf~~l~~~-n------------~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V 141 (283)
T 2oo3_A 81 LEYISVIKQI-N------------LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF----NKKVYV 141 (283)
T ss_dssp HHHHHHHHHH-S------------SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT----TSCEEE
T ss_pred HHHHHHHHHh-c------------CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEE
Confidence 4677766652 1 23589999999999988765 457999999999999999999864 347898
Q ss_pred EEcCCCCCCCcccccccCCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCc
Q 016734 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251 (384)
Q Consensus 172 ~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy 251 (384)
++.|... .+..+....++||+|+.-|||
T Consensus 142 ~~~D~~~----------------------------------------------------~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 142 NHTDGVS----------------------------------------------------KLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp ECSCHHH----------------------------------------------------HHHHHCSCTTSCEEEEECCCC
T ss_pred EeCcHHH----------------------------------------------------HHHHhcCCCCCccEEEECCCC
Confidence 8877321 111122234679999999999
Q ss_pred ccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccC----eEEEEEecCCCCHHHHHHHHHHcCCeEEEE
Q 016734 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF----RWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (384)
Q Consensus 252 ~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~----~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~ 327 (384)
-...+ ..-+...+.++.. +... -||- ++. ......+.+.|++.|+ ++-.
T Consensus 170 e~k~~-----------------------~~~vl~~L~~~~~-r~~~Gi~v~WYP-i~~-~~~~~~~~~~l~~~~~-~~l~ 222 (283)
T 2oo3_A 170 ERKEE-----------------------YKEIPYAIKNAYS-KFSTGLYCVWYP-VVN-KAWTEQFLRKMREISS-KSVR 222 (283)
T ss_dssp CSTTH-----------------------HHHHHHHHHHHHH-HCTTSEEEEEEE-ESS-HHHHHHHHHHHHHHCS-SEEE
T ss_pred CCCcH-----------------------HHHHHHHHHHhCc-cCCCeEEEEEEe-ccc-hHHHHHHHHHHHhcCC-CeEE
Confidence 73211 1112223333332 2233 3663 333 3457788888888888 6777
Q ss_pred EEeeC
Q 016734 328 TEFVQ 332 (384)
Q Consensus 328 ~e~~q 332 (384)
.|+.-
T Consensus 223 ~el~~ 227 (283)
T 2oo3_A 223 IELHL 227 (283)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76653
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.13 E-value=0.0086 Score=57.77 Aligned_cols=63 Identities=10% Similarity=0.038 Sum_probs=49.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHH-C-CCC-CCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-N-PHI-SELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~-n-~~l-~~~I~~~~~d~~ 177 (384)
.+.+||=||-|.|.+.-.+++..+..+++.||||++.++.|++-... + +.+ ..|++++.+|..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 56799999999999987777655567999999999999999987532 1 112 358999998854
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.09 E-value=0.0011 Score=62.18 Aligned_cols=60 Identities=20% Similarity=0.142 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCC
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~ 163 (384)
+.++..+..... .....|||..||||..+.... ..+.+++|+|+++.+++.|++|++.++
T Consensus 199 ~~l~~~~i~~~~----------~~~~~vlD~f~GsGtt~~~a~--~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 199 RDLIERIIRASS----------NPNDLVLDCFMGSGTTAIVAK--KLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHHC----------CTTCEEEESSCTTCHHHHHHH--HTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC----------CCCCEEEECCCCCCHHHHHHH--HcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 445655555542 234689999999999865544 347799999999999999999998775
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.06 E-value=0.0038 Score=58.86 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=34.4
Q ss_pred CCCeEEEECCcccHHHHHHHhh-------ccC-----CEEEEEeCcH---HHHH-----------HHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGAS-------LLG-----WSFVGSDMTD---VALE-----------WAEKNVKS 161 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~-------~~~-----~~v~gvDid~---~al~-----------~A~~Ni~~ 161 (384)
...+|||||||+|.-.+.++.. .|. .+|+++|.+| +.+. .|+.+++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~ 132 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQ 132 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHT
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHh
Confidence 3569999999999877766543 342 5899999887 4333 67777765
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.73 E-value=0.0019 Score=61.93 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhc-----cCCEEEEEeCcH---------------
Q 016734 90 NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTD--------------- 149 (384)
Q Consensus 90 ~r~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~-----~~~~v~gvDid~--------------- 149 (384)
+|...+..+...+... ..+..||++||..|.-++.++... ++.+|+++|..+
T Consensus 89 ~r~~~L~~l~~~v~~~--------~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~ 160 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGN--------NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRK 160 (282)
T ss_dssp HHHHHHHHHHHHHHHT--------TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhc--------CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccc
Confidence 5666666666655432 246799999999998777776544 367899999631
Q ss_pred -----------HHHHHHHHHHHHCCCC-CCceEEEEcCCC
Q 016734 150 -----------VALEWAEKNVKSNPHI-SELIEIRKVDNS 177 (384)
Q Consensus 150 -----------~al~~A~~Ni~~n~~l-~~~I~~~~~d~~ 177 (384)
..++.|++|+++.+ + .++|+++.++..
T Consensus 161 ~~~~~~~~~~~~~~~~ar~n~~~~g-l~~~~I~li~Gda~ 199 (282)
T 2wk1_A 161 MALHRRNSVLAVSEEEVRRNFRNYD-LLDEQVRFLPGWFK 199 (282)
T ss_dssp HCGGGGHHHHCCCHHHHHHHHHHTT-CCSTTEEEEESCHH
T ss_pred cccccccccchhHHHHHHHHHHHcC-CCcCceEEEEeCHH
Confidence 14778999999998 7 489999999843
No 289
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.67 E-value=0.0052 Score=60.76 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=47.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...|||||.|.|++...|+.+....+++++|+|+..+...++.. .. ++++++++|..+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~----~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG----SPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT----SSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC----CCEEEEECCccc
Confidence 46899999999999999987655568999999999998887765 22 479999999653
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.54 E-value=0.0036 Score=59.73 Aligned_cols=80 Identities=13% Similarity=0.119 Sum_probs=50.6
Q ss_pred CCcEEEEEECCCcccchhhhccCCccccCCCcccccccCc--hHHHHHHHHHHHHHhhccCeEEEEEecCCC--------
Q 016734 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGG--ERAFITRIIEDSVALKQTFRWYTSMVGRKS-------- 308 (384)
Q Consensus 239 ~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GG--el~Fv~~ii~eS~~l~~~~~w~t~~vgk~~-------- 308 (384)
+++||+|+|||||+...+.... +. ... ..... .+.++..+++++.++++.+|++.+++|...
T Consensus 38 ~~s~DlIvtdPPY~~~~~y~~~-~~-----~~~--~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~~g~ 109 (297)
T 2zig_A 38 EASVHLVVTSPPYWTLKRYEDT-PG-----QLG--HIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAVARRRFGR 109 (297)
T ss_dssp TTCEEEEEECCCCCCCC-------------CCH--HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEECC----
T ss_pred CCceeEEEECCCCCCccccCCC-hh-----hhc--ccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCccccccCCc
Confidence 5789999999999865322111 00 000 00111 145567888999999999999988888321
Q ss_pred -----CHHHHHHHHHHcCCeEEE
Q 016734 309 -----NLKFLISKLRKVGVTIVK 326 (384)
Q Consensus 309 -----~l~~l~~~L~~~g~~~v~ 326 (384)
....+..++++.|+....
T Consensus 110 ~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 110 HLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECHHHHHHHHHHHTTCEEEE
T ss_pred ccccccHHHHHHHHHHcCCeeec
Confidence 124678889999986444
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.19 E-value=0.018 Score=57.54 Aligned_cols=137 Identities=14% Similarity=0.166 Sum_probs=84.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHC--CCC----CCceEEEEcCCCCCCCccccccc
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--PHI----SELIEIRKVDNSESTPSIQESLT 188 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n--~~l----~~~I~~~~~d~~~~~p~~~~~~~ 188 (384)
.+.+||=||-|.|.+...+.+ .+..+++.||||++.++.|++-.... +.+ .++++++.+|..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~---------- 273 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP---------- 273 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH----------
T ss_pred CCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH----------
Confidence 356899999999998877765 45579999999999999999864211 001 2357777776321
Q ss_pred CCccccccccccCCCCCcCCCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcEEEEEECCCcccchhhhccCCccccCC
Q 016734 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGG 268 (384)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~~~~~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g 268 (384)
++.......++||+||.-.+=.+.. ..|. +
T Consensus 274 ------------------------------------------fl~~~~~~~~~yDvIIvDl~D~~~s----~~p~----g 303 (381)
T 3c6k_A 274 ------------------------------------------VLKRYAKEGREFDYVINDLTAVPIS----TSPE----E 303 (381)
T ss_dssp ------------------------------------------HHHHHHHHTCCEEEEEEECCSSCCC----CC-------
T ss_pred ------------------------------------------HHHhhhhccCceeEEEECCCCCccc----Cccc----C
Confidence 1111112356899999874211100 0010 0
Q ss_pred CcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCC---HHHHHHHHHHc
Q 016734 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN---LKFLISKLRKV 320 (384)
Q Consensus 269 ~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~---l~~l~~~L~~~ 320 (384)
. ....|.+...+.+.+.++.+|.+.+..+-... +..+.+.|++.
T Consensus 304 ~--------a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 304 D--------STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 350 (381)
T ss_dssp ---------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred c--------chHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh
Confidence 0 13457777778888889999998765553222 34455556655
No 292
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.32 E-value=0.022 Score=55.43 Aligned_cols=44 Identities=18% Similarity=0.081 Sum_probs=35.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~-v~gvDid~~al~~A~~Ni~ 160 (384)
...++||+.||+|.+...+. ..+++ +.++|+|+.|++..+.|..
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~--~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALE--SCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHH--HTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCCcEEEECCCcCHHHHHHH--HCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 35789999999998865554 44665 6689999999999999963
No 293
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.25 E-value=0.043 Score=54.87 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=49.9
Q ss_pred CCCeEEEECCcccHHHHHHH-hhccC-CEEEEEeCcHHHHHHHHHHHHH--CCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLG-ASLLG-WSFVGSDMTDVALEWAEKNVKS--NPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La-~~~~~-~~v~gvDid~~al~~A~~Ni~~--n~~l~~~I~~~~~d~ 176 (384)
....++|+|++.|..+..++ ...+. .+|+++|.+|.+++..++|++. |+.+.++|.+++.-.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 45689999999999888777 34444 6999999999999999999998 542326788887654
No 294
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.63 E-value=0.042 Score=54.51 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=38.4
Q ss_pred CeEEEECCcccHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~~~~-v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.++||+.||+|.+.+-+.. .+++ +.|+|+|+.|++..+.|.. ...++.+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~--aG~~~v~avE~d~~a~~t~~~N~~-------~~~~~~~DI~ 55 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR--AGFDVKMAVEIDQHAINTHAINFP-------RSLHVQEDVS 55 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH--HTCEEEEEECSCHHHHHHHHHHCT-------TSEEECCCGG
T ss_pred CeEEEEccCcCHHHHHHHH--CCCcEEEEEeCCHHHHHHHHHhCC-------CCceEecChh
Confidence 5799999999988765543 4665 5599999999998888842 2345566643
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.00 E-value=0.08 Score=52.05 Aligned_cols=57 Identities=16% Similarity=-0.037 Sum_probs=46.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
....++|..+|.|.-+..|+... ++.+|+|+|+|+.|++.|+ .+ ..+++++++++..
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----DDPRFSIIHGPFS 114 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----CCTTEEEEESCGG
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----cCCcEEEEeCCHH
Confidence 34689999999999988888775 6779999999999999984 32 2358999988754
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.75 E-value=0.14 Score=49.41 Aligned_cols=75 Identities=15% Similarity=0.219 Sum_probs=50.6
Q ss_pred CCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC--C--------
Q 016734 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK--S-------- 308 (384)
Q Consensus 239 ~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~--~-------- 308 (384)
+++||+|+|+|||...... .. ..... ..-+.+....++++.++++.+|.+...++.. .
T Consensus 31 ~~svDlI~tDPPY~~~~~~-~y------~~~~~-----~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~ 98 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKK-EY------GNLEQ-----HEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIY 98 (323)
T ss_dssp SSCEEEEEECCCCSSSCSC-SS------CSCHH-----HHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCH
T ss_pred CCCeeEEEECCCCCCCccc-cc------CCcCH-----HHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccc
Confidence 5789999999999865321 00 00000 0015678888899889999999988888843 1
Q ss_pred CHHHHHHHHHHcCCeEE
Q 016734 309 NLKFLISKLRKVGVTIV 325 (384)
Q Consensus 309 ~l~~l~~~L~~~g~~~v 325 (384)
.+..+...++..|+...
T Consensus 99 ~~~~i~~~~~~~Gf~~~ 115 (323)
T 1boo_A 99 NFRVLIRMIDEVGFFLA 115 (323)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHhCCCEEE
Confidence 25667777888998543
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=93.43 E-value=0.14 Score=50.86 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=35.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
...++|||||..|.-.-.|+.+ +.+|+|||+.+-. ..+..+ .+|+++++|.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~~----~~V~~~~~d~ 261 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMDT----GQVTWLREDG 261 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHTT----TCEEEECSCT
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhccC----CCeEEEeCcc
Confidence 3568999999999987777654 6799999976422 122222 3688887764
No 298
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.16 E-value=0.11 Score=50.15 Aligned_cols=47 Identities=15% Similarity=0.008 Sum_probs=38.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~ 163 (384)
....|||.-||||..+.+ +...+.+++|+|+++.+++.|+++++..+
T Consensus 252 ~~~~VlDpF~GsGtt~~a--a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLV--AERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHH--HHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHH--HHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 456899999999988544 34457899999999999999999987654
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.75 E-value=0.13 Score=50.05 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=35.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCC-EEEEEeCcHHHHHHHHHHHH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~-~v~gvDid~~al~~A~~Ni~ 160 (384)
+.++||+.||+|.+.+.+......+ .+.++|+|+.|++..+.|..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 3589999999999977665543223 58899999999999999863
No 300
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.31 E-value=0.19 Score=48.56 Aligned_cols=60 Identities=12% Similarity=0.014 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH---HHHHHHHHHHHHCC
Q 016734 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD---VALEWAEKNVKSNP 163 (384)
Q Consensus 92 ~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~---~al~~A~~Ni~~n~ 163 (384)
..++..+..... .....|||.-||||..+.+.. ..+.+++|+|+++ ..++.|+++++..+
T Consensus 229 ~~l~~~~i~~~~----------~~~~~vlDpF~GsGtt~~aa~--~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALS----------HPGSTVLDFFAGSGVTARVAI--QEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHS----------CTTCEEEETTCTTCHHHHHHH--HHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhC----------CCCCEEEecCCCCCHHHHHHH--HcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 556666666553 245689999999998864443 4478999999999 99999999987655
No 301
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.04 E-value=0.86 Score=45.11 Aligned_cols=49 Identities=8% Similarity=-0.050 Sum_probs=32.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|+|+|||+|...+.+... +++..++.....+.-...++++..|..
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~--------------ii~~i~~~~~~~~~~~pe~~v~~nDLp 100 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDF--------------IVKHISKRFDAAGIDPPEFTAFFSDLP 100 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHH--------------HHHHHHHHHHHTTCCCCCEEEEEEECT
T ss_pred CceEEEecCCCCChhHHHHHHH--------------HHHHHHHHHhhcCCCCCceeEEecCCC
Confidence 4679999999999988777654 455444444443312235888887754
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.78 E-value=0.28 Score=47.62 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=34.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCE-E-EEEeCcHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWS-F-VGSDMTDVALEWAEKNV 159 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~-v-~gvDid~~al~~A~~Ni 159 (384)
++.+++|+.||.|.+...+.....+++ + .|+|+|+.|++.-+.|.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 467999999999988665544322234 4 69999999999999886
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.11 E-value=0.56 Score=44.87 Aligned_cols=46 Identities=7% Similarity=0.061 Sum_probs=34.7
Q ss_pred CCCCeEEEECCcccHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHHH
Q 016734 114 GDKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 114 ~~~~~vLDIGtGsG~I~~~La~~~~~~~-v~gvDid~~al~~A~~Ni 159 (384)
....+++|+.||.|.+...+......+. +.++|+|+.|++.-+.|.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 3567999999999988765544333333 589999999998877774
No 304
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=88.74 E-value=1.4 Score=43.82 Aligned_cols=21 Identities=14% Similarity=-0.168 Sum_probs=17.3
Q ss_pred CCeEEEECCcccHHHHHHHhh
Q 016734 116 KVKGFDIGTGANCIYPLLGAS 136 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~ 136 (384)
..+|+|+|||+|...+.+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 579999999999887776554
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.40 E-value=1 Score=41.58 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=47.7
Q ss_pred CCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHH
Q 016734 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318 (384)
Q Consensus 239 ~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~ 318 (384)
+++||+|++.|||.......+ .+. +..+ =+.|....++++.++++..|.+...++ ......+...+.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d-----~~~-~~~~------y~~~~~~~l~~~~~~Lk~~g~i~v~~~-d~~~~~~~~~~~ 87 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWD-----SFD-SHNE------FLAFTYRWIDKVLDKLDKDGSLYIFNT-PFNCAFICQYLV 87 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGG-----CCS-SHHH------HHHHHHHHHHHHHHHEEEEEEEEEEEC-HHHHHHHHHHHH
T ss_pred ccccCEEEECCCCCCCccccc-----ccC-CHHH------HHHHHHHHHHHHHHHhcCCeEEEEEcC-cHHHHHHHHHHH
Confidence 568999999999975421110 010 0110 156888888888888888888777765 334455667788
Q ss_pred HcCCe
Q 016734 319 KVGVT 323 (384)
Q Consensus 319 ~~g~~ 323 (384)
+.|+.
T Consensus 88 ~~gf~ 92 (260)
T 1g60_A 88 SKGMI 92 (260)
T ss_dssp HTTCE
T ss_pred hhccc
Confidence 88884
No 306
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=86.42 E-value=0.85 Score=44.28 Aligned_cols=44 Identities=18% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHHH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~-v~gvDid~~al~~A~~Ni 159 (384)
+.+++|+.||.|.+...+.....+++ +.|+|+|+.|.+.-+.|.
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC
Confidence 45899999999988766544333334 679999999998888875
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=84.95 E-value=1.3 Score=45.38 Aligned_cols=44 Identities=16% Similarity=0.057 Sum_probs=34.8
Q ss_pred CCCCeEEEECCcccHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHHH
Q 016734 114 GDKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 114 ~~~~~vLDIGtGsG~I~~~La~~~~~~~-v~gvDid~~al~~A~~Ni 159 (384)
....+++|+.||.|.+..-+ +..+++ +.++|+|+.|++.-+.|.
T Consensus 86 ~~~~~viDLFaG~GGlslG~--~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGF--ESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHH--HTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred CccceEEEecCCccHHHHHH--HHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 34679999999999875444 445665 678999999998888875
No 308
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=83.82 E-value=21 Score=34.58 Aligned_cols=65 Identities=9% Similarity=-0.112 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCC---eeEEEEEEecCCc
Q 016734 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSFVPP 347 (384)
Q Consensus 280 l~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~~AWsf~~~ 347 (384)
..+++..++-+.+.++.+|-|..=+=.-+.-+.+ ..+++ .|+.|++.. ..-+ ..-++|+.-|...
T Consensus 193 ~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L-~~lrk-~F~~VK~fK-~ASRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 193 EGFFTYLCGFIKQKLALGGSIAVKITEHSWNADL-YKLMG-HFSWWTAFV-TNVNASSSEAFLIGANYLGK 260 (344)
T ss_dssp CTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHH-HHHHT-TEEEEEEEE-EGGGTTSSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHH-HHHHh-hCCeEEEEC-CCCCCCCeeEEEEeeeccCC
Confidence 3466666677777888888876555433443444 44554 777777775 2333 2557888888765
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=82.40 E-value=1.2 Score=42.26 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=31.1
Q ss_pred eEEEECCcccHHHHHHHhhccCCEE-EEEeCcHHHHHHHHHH
Q 016734 118 KGFDIGTGANCIYPLLGASLLGWSF-VGSDMTDVALEWAEKN 158 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~~~~~v-~gvDid~~al~~A~~N 158 (384)
++||+-||.|.+.. +.+..|+++ .|+|+|+.|++.-+.|
T Consensus 2 kvidLFsG~GG~~~--G~~~aG~~~v~a~e~d~~a~~ty~~N 41 (331)
T 3ubt_Y 2 NLISLFSGAGGLDL--GFQKAGFRIICANEYDKSIWKTYESN 41 (331)
T ss_dssp EEEEESCTTCHHHH--HHHHTTCEEEEEEECCTTTHHHHHHH
T ss_pred eEEEeCcCccHHHH--HHHHCCCEEEEEEeCCHHHHHHHHHH
Confidence 69999999998754 444556765 5899999999888777
No 310
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.58 E-value=2.3 Score=40.34 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=46.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|+++| |+..++..+ .+++|++++.+++.++.+...+...+ ...++.++..|+.+
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG-SGPEVMGVQLDVAS 70 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCTTC
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCCeEEEEECCCCC
Confidence 457888887766 777777655 58999999999999888877776654 33468889888653
No 311
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=79.83 E-value=2.9 Score=41.13 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=14.9
Q ss_pred CCCeEEEECCcccHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLL 133 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~L 133 (384)
...+|+|+||++|.-.+.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~ 69 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFA 69 (359)
T ss_dssp SEECCEEESCCSSTTTTTG
T ss_pred CceEEEecCCCCCcchHHH
Confidence 4578999999999765443
No 312
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=79.57 E-value=1.1 Score=42.90 Aligned_cols=34 Identities=9% Similarity=-0.120 Sum_probs=26.2
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
..+|||||||.|.-.-.++.+.+...++|+|+..
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~ 124 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV 124 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc
Confidence 3489999999998876666555545789999874
No 313
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=79.51 E-value=1.1 Score=42.57 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=24.6
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCc
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT 148 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid 148 (384)
..+|||||||.|...-.++.+.+...++|+|+.
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG 107 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG 107 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe
Confidence 358999999999887666554444478888876
No 314
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=77.00 E-value=4.2 Score=37.10 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=42.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..++|=.|+++| |+..++.++ .+++|+.+|.+++.++.+.+.+.... ....+.++..|..
T Consensus 10 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 10 GKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPVVADLG 71 (267)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-TTCEEEEEECCTT
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEecCCC
Confidence 456777776554 787777654 58999999999998887777666543 2346777777754
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=76.66 E-value=7.6 Score=36.68 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=45.8
Q ss_pred EEEecCCCccCCCcCHHHHHHHH---------HHHhccCCCCCCCCCCCCCeEEEECCcc-cHHHHHHHhhccCCEEEEE
Q 016734 76 NWWIPDGQLCPTVPNRSNYIHWI---------EDLLSSNIIPTTSRNGDKVKGFDIGTGA-NCIYPLLGASLLGWSFVGS 145 (384)
Q Consensus 76 ~~~vp~~~LiPrvP~r~~yi~~i---------~dll~~~~~~~~~~~~~~~~vLDIGtGs-G~I~~~La~~~~~~~v~gv 145 (384)
-+.+|...++|- |+...+.+.. ...+.... -....+||-+|+|. |.+++.+++. .+++|+++
T Consensus 125 y~~v~~~~~~~i-P~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~g~~VlV~GaG~vG~~a~qla~~-~Ga~Vi~~ 196 (340)
T 3s2e_A 125 YVVADPNYVGLL-PDKVGFVEIAPILCAGVTVYKGLKVTD------TRPGQWVVISGIGGLGHVAVQYARA-MGLRVAAV 196 (340)
T ss_dssp EEEECTTTSEEC-CTTSCHHHHGGGGTHHHHHHHHHHTTT------CCTTSEEEEECCSTTHHHHHHHHHH-TTCEEEEE
T ss_pred EEEechHHEEEC-CCCCCHHHhhcccchhHHHHHHHHHcC------CCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEE
Confidence 367788877775 6654443321 11121111 12345778789875 5555556654 57899999
Q ss_pred eCcHHHHHHHHH
Q 016734 146 DMTDVALEWAEK 157 (384)
Q Consensus 146 Did~~al~~A~~ 157 (384)
|.+++.++.|++
T Consensus 197 ~~~~~~~~~~~~ 208 (340)
T 3s2e_A 197 DIDDAKLNLARR 208 (340)
T ss_dssp ESCHHHHHHHHH
T ss_pred eCCHHHHHHHHH
Confidence 999999888754
No 316
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.38 E-value=2.4 Score=39.53 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=44.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+.+.+|=-|.++| |+..++..+ .+++|+.+|++++.++.+.+.+...+ .++..+..|+.
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~ 68 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVT 68 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC
Confidence 3456777776666 777777665 58999999999999988888777765 25777777765
No 317
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=75.12 E-value=16 Score=34.88 Aligned_cols=70 Identities=14% Similarity=0.259 Sum_probs=48.6
Q ss_pred CCcEEEEEECCCcccchhhhccCCccccCCCcccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCC-------CCHH
Q 016734 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-------SNLK 311 (384)
Q Consensus 239 ~~~fD~i~cNPPy~~s~~~~~~~p~~~~~g~~~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~-------~~l~ 311 (384)
+++||+|++=|||....+.- .. ...-+.+....+.++.++++..|.+..+++.. ..+.
T Consensus 56 ~~svDlI~tDPPY~~~~d~~--------~~-------~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l~ 120 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADW--------DD-------HMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLI 120 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGG--------GT-------CSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHH
T ss_pred cCCcCEEEECCCCCCCCCCc--------cC-------HHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccHH
Confidence 56899999999997642110 00 01125678888888888999999988888844 2347
Q ss_pred HHHHHHHHcC-Ce
Q 016734 312 FLISKLRKVG-VT 323 (384)
Q Consensus 312 ~l~~~L~~~g-~~ 323 (384)
.+...+...| +.
T Consensus 121 ~l~~~i~~~G~~~ 133 (319)
T 1eg2_A 121 SIISHMRQNSKML 133 (319)
T ss_dssp HHHHHHHHHCCCE
T ss_pred HHHHHHhCcccce
Confidence 7777777776 64
No 318
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=74.58 E-value=6.1 Score=36.73 Aligned_cols=61 Identities=13% Similarity=0.058 Sum_probs=43.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCC---EEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~---~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .++ +|+.++.+++.++.+.+.+.... -..++.++..|+.+
T Consensus 33 ~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d 98 (287)
T 3rku_A 33 KKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDITQ 98 (287)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTTC
T ss_pred CCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCCC
Confidence 347888887665 777776654 234 99999999999888777776532 23468888888653
No 319
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=71.74 E-value=7.3 Score=37.61 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=46.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcHHHHHHHHHHHHHCCC-------------------CCCceEEEEcCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH-------------------ISELIEIRKVDN 176 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~~al~~A~~Ni~~n~~-------------------l~~~I~~~~~d~ 176 (384)
...|+.+|||....+..|....++.+++-+|. |+.++.-++-+...+. ..++..++-.|.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 46899999999999888876656777777777 8888888887776521 125677887776
Q ss_pred CC
Q 016734 177 SE 178 (384)
Q Consensus 177 ~~ 178 (384)
.+
T Consensus 177 ~d 178 (334)
T 1rjd_A 177 ND 178 (334)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 320
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=71.42 E-value=18 Score=33.48 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=46.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+.+.+|=-|.++| |+..++..+ .+++|+.+|.+++.++.+.+.++..+ .++.++..|+.+
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSK 67 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 3456777787777 777777654 58999999999999998888887765 368888998754
No 321
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=70.06 E-value=2.1 Score=41.32 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=24.8
Q ss_pred CCeEEEECCcccHHHHHHHhhccCC-EEEEEeCcH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTD 149 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~-~v~gvDid~ 149 (384)
...||||||+.|...-..+. ..++ .|+|+|+-.
T Consensus 95 ~~~VlDLGaapGGwsq~~~~-~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMAT-QKRVQEVRGYTKGG 128 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTT-CTTEEEEEEECCCS
T ss_pred CCEEEEeCCCCCcHHHHHHh-hcCCCEEEEEEcCC
Confidence 45999999999987654443 3444 699999864
No 322
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=69.60 E-value=2.8 Score=39.44 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=25.5
Q ss_pred CCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
...||||||+.|--.-..+......+|+|+|+-.
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 4589999999998776555443334799999864
No 323
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=69.20 E-value=2.8 Score=40.28 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=27.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCCEEEEEeCcH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDid~ 149 (384)
...+||||||+.|.-.-.++.+.+-..|+|+|+..
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 45689999999999877776554444788999864
No 324
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=68.39 E-value=5.8 Score=39.49 Aligned_cols=46 Identities=13% Similarity=-0.000 Sum_probs=35.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCC---EEEEEeCcHHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~---~v~gvDid~~al~~A~~Ni~ 160 (384)
...+++|+.||.|.+...|-... ..+ .|.++|+|+.|++.-+.|..
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 34799999999999877665433 121 26789999999998888874
No 325
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=65.58 E-value=7.4 Score=43.31 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=33.9
Q ss_pred CCCCeEEEECCcccHHHHHHHhhccCC--EEEEEeCcHHHHHHHHHH
Q 016734 114 GDKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKN 158 (384)
Q Consensus 114 ~~~~~vLDIGtGsG~I~~~La~~~~~~--~v~gvDid~~al~~A~~N 158 (384)
....++||+-||.|.+..-| +..|+ .+.|+|+|+.|++.-+.|
T Consensus 538 ~~~l~~iDLFaG~GGlslGl--~~AG~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGF--HQAGISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHH--HHHTSEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCeEEEeccCccHHHHHH--HHCCCCceEEEEECCHHHHHHHHHh
Confidence 45678999999999886544 44566 467999999999887777
No 326
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=65.42 E-value=64 Score=30.87 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=34.0
Q ss_pred ccccccCchHHHHHHHHHHHHHhhccCeEEEEEecCCCCHHHHHHHHHHcCCeEEEEEEeeCCCeeEEEEE
Q 016734 271 EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341 (384)
Q Consensus 271 ~E~~~~GGel~Fv~~ii~eS~~l~~~~~w~t~~vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~~A 341 (384)
.|||+ ..+...| .++.+.+|.+++ ++..-.|...|+++||. |....= .|++.-+.+|
T Consensus 201 PeLWs----~e~f~~l----~~~~~pgg~laT----Ytaag~VRR~L~~aGF~-V~k~~G-~g~KReml~A 257 (308)
T 3vyw_A 201 PELWT----LDFLSLI----KERIDEKGYWVS----YSSSLSVRKSLLTLGFK-VGSSRE-IGRKRKGTVA 257 (308)
T ss_dssp GGGGS----HHHHHHH----HTTEEEEEEEEE----SCCCHHHHHHHHHTTCE-EEEEEC-C---CEEEEE
T ss_pred cccCC----HHHHHHH----HHHhCCCcEEEE----EeCcHHHHHHHHHCCCE-EEecCC-CCCCCceeEE
Confidence 46775 3444444 445667777654 45568899999999997 444432 2444455556
No 327
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=64.98 E-value=25 Score=31.47 Aligned_cols=60 Identities=15% Similarity=0.011 Sum_probs=43.7
Q ss_pred CCeEEEECC-cccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGT-GANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGt-GsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|. |+| |+..++..+ .+++|+.++.+++.++.+.+.++..+ ..++.++..|+.+
T Consensus 22 ~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTC
T ss_pred CCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCC
Confidence 456776665 555 676666654 58999999999998888777775543 3479999998754
No 328
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=64.55 E-value=12 Score=32.96 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=36.7
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhccCCEEEEEeC
Q 016734 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (384)
Q Consensus 93 ~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~~~~v~gvDi 147 (384)
+.+.|+.+.... -..-|||+|-|.|--|-.|...+|+-+++++|-
T Consensus 28 ~~L~~a~~~v~~----------~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 28 ACLEHAIAQTAG----------LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHTTT----------CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHhcC----------CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 446677766543 356799999999999999999999999999985
No 329
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=64.07 E-value=8.8 Score=35.97 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=41.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+.+.+|=-|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+ + .++..+..|+.+
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~~ 86 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSAN 86 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTTC
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCCC
Confidence 4557787888777 787777665 5899999999999887765443 2 246777888653
No 330
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=64.00 E-value=9.7 Score=36.98 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=30.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~ 156 (384)
..+||-+|+|. |.+++.+++. .++ +|+++|.+++.++.|+
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHH
Confidence 45899999876 6666666654 467 9999999999888774
No 331
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=63.25 E-value=15 Score=32.59 Aligned_cols=56 Identities=14% Similarity=0.123 Sum_probs=40.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...++|=.|+++| |+..++..+ .+++|+.++.+++.++...+.+ ..++.++..|..
T Consensus 13 ~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 70 (249)
T 3f9i_A 13 TGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDNYTIEVCNLA 70 (249)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTT
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------ccCccEEEcCCC
Confidence 4567888887655 777777654 4899999999998877655443 235788888754
No 332
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=63.23 E-value=18 Score=32.56 Aligned_cols=59 Identities=15% Similarity=0.156 Sum_probs=45.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+++|.+++.++.+...+...+ .++.++..|+.+
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARN 67 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCC
Confidence 457888887766 777777654 48999999999998888877777654 368899998754
No 333
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.01 E-value=32 Score=30.47 Aligned_cols=59 Identities=24% Similarity=0.221 Sum_probs=44.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++.++ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..+
T Consensus 9 ~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 69 (253)
T 3qiv_A 9 NKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSD 69 (253)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTS
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 457888887655 777777665 48999999999999888877776553 368888888653
No 334
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=62.91 E-value=37 Score=31.13 Aligned_cols=59 Identities=10% Similarity=0.063 Sum_probs=42.2
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEe-CcHHHHHHHHHHHH-HCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvD-id~~al~~A~~Ni~-~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.++ .+++.++.+.+.+. ..+ .++.++..|+.+
T Consensus 9 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~ 71 (291)
T 1e7w_A 9 VPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLSN 71 (291)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCSS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC---CeeEEEEeecCC
Confidence 346776776555 787777654 489999999 99988877766665 333 368888888653
No 335
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=62.77 E-value=36 Score=30.62 Aligned_cols=59 Identities=19% Similarity=0.034 Sum_probs=45.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITD 71 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 457888887766 677766654 58999999999999888877776654 368889888754
No 336
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=62.47 E-value=33 Score=31.71 Aligned_cols=60 Identities=20% Similarity=0.073 Sum_probs=45.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 91 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRH 91 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCC
Confidence 3457888887766 777777654 57999999999999988877776654 368888888754
No 337
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=62.10 E-value=34 Score=31.04 Aligned_cols=62 Identities=18% Similarity=0.061 Sum_probs=45.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.++..+.-..++.++..|+.+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 11 DRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 457888887655 777777654 58999999999999888877776554122368888888653
No 338
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=61.54 E-value=7.7 Score=31.47 Aligned_cols=50 Identities=18% Similarity=0.121 Sum_probs=34.9
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.+++=+|+| .++..++..+ .+++|+++|.+++.++.++. .+ +.++.+|..
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~-----~~~~~gd~~ 58 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG-----FDAVIADPT 58 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEECCTT
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC-----CcEEECCCC
Confidence 367778875 4777766654 47899999999988776643 22 566777743
No 339
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=61.23 E-value=39 Score=30.48 Aligned_cols=61 Identities=20% Similarity=0.120 Sum_probs=44.2
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|++ |.|+..++..+ .+++|++++.++..++.....+...+ ...++.++..|+.+
T Consensus 32 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 32 DRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLSN 94 (279)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-CCceEEEEEecCCC
Confidence 3567777755 55787777654 48899999999988877766666654 44568888888653
No 340
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=61.07 E-value=14 Score=35.28 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=30.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++. .++ +|+++|.+++.++.|++
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH
Confidence 45899999875 5555556554 466 79999999999888864
No 341
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=60.66 E-value=17 Score=36.05 Aligned_cols=54 Identities=13% Similarity=0.084 Sum_probs=36.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-------cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-------~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~ 172 (384)
.+..|+|+|.|+|.+..-+.... ...+++.||+|+...+.-++.+... ++|.++
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~----~~v~W~ 140 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI----RNIHWH 140 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC----SSEEEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC----CCeEEe
Confidence 45689999999999876554321 2358999999998777555444322 256665
No 342
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=60.46 E-value=15 Score=34.61 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++...+.+|+++|.+++-++.|++
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45788888865 5555566665557899999999999888854
No 343
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=59.89 E-value=32 Score=30.86 Aligned_cols=59 Identities=19% Similarity=0.098 Sum_probs=44.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 89 (262)
T 3rkr_A 29 GQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSH 89 (262)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCC
Confidence 457887776554 787777654 58999999999999888877776654 368888888653
No 344
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=59.89 E-value=31 Score=31.21 Aligned_cols=60 Identities=15% Similarity=0.030 Sum_probs=44.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|+++| |+..++..+ .+++|++++.++..++.+.+.+...+ ..++.++..|+.+
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTD 73 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTS
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCC
Confidence 456777776655 787777654 58999999999998888777776543 2468899988753
No 345
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=59.87 E-value=18 Score=33.16 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=40.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|+++| |+..++..+ .+++|++++.++..++.+.+. +..++.++..|..+
T Consensus 15 ~gk~vlVTGas~g-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~d 73 (291)
T 3rd5_A 15 AQRTVVITGANSG-LGAVTARELARRGATVIMAVRDTRKGEAAART------MAGQVEVRELDLQD 73 (291)
T ss_dssp TTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------SSSEEEEEECCTTC
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------hcCCeeEEEcCCCC
Confidence 3457777786655 777777654 578999999998876554332 34578899888653
No 346
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=58.91 E-value=32 Score=26.12 Aligned_cols=38 Identities=21% Similarity=0.121 Sum_probs=27.4
Q ss_pred CeEEEECCcccHHHHHHHhhc--cC-CEEEEEeCcHHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LG-WSFVGSDMTDVALEWAE 156 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~-~~v~gvDid~~al~~A~ 156 (384)
.+|+=+|+ |.++..++..+ .+ ++|+++|.+++.++.+.
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 46887887 66776665543 35 79999999998776554
No 347
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=58.68 E-value=46 Score=31.26 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=41.5
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEe-CcHHHHHHHHHHHH-HCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvD-id~~al~~A~~Ni~-~n~~l~~~I~~~~~d~~~ 178 (384)
..+|=.|.++ .|+..++..+ .+++|+.++ .+++.++.+.+.+. ..+ .++.++..|+.+
T Consensus 47 k~~lVTGas~-GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~d 108 (328)
T 2qhx_A 47 PVALVTGAAK-RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLSN 108 (328)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCSS
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC---CeEEEEEeeCCC
Confidence 4677666554 4787777654 589999999 99988877766665 333 368888888653
No 348
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=58.60 E-value=34 Score=31.14 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=43.6
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|+++| |+..++..+ .+++|+.++.+++.++.+.+.++..+ .++.++..|+.+
T Consensus 5 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 64 (264)
T 3tfo_A 5 KVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTD 64 (264)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 46777776655 777777654 58999999999999888877776654 368888888653
No 349
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=58.27 E-value=37 Score=30.47 Aligned_cols=60 Identities=13% Similarity=0.123 Sum_probs=44.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..+
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 72 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTD 72 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 3456777777655 777777654 48999999999998888777776654 368888888754
No 350
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=57.96 E-value=21 Score=32.28 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=40.0
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+|=.|.+ |.|+..++..+ .+++|++++. +++.++.+.+.+.... ..++.++..|..
T Consensus 12 k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~ 72 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLS 72 (276)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCS
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCC
Confidence 467766655 44787777654 4899999999 8887776665554430 135888888865
No 351
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=57.80 E-value=36 Score=30.43 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=44.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.+.....-..++.++..|+.+
T Consensus 7 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 7 KGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 457888887766 777776654 48899999999998888777765542111468888888653
No 352
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=57.77 E-value=42 Score=30.18 Aligned_cols=60 Identities=15% Similarity=0.029 Sum_probs=44.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHH-CCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKS-NPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~-n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+.+|.+++.++.+.+.+.. .+ ..++.++..|+.+
T Consensus 8 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 8 EAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP--GARLFASVCDVLD 70 (265)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTTC
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCC
Confidence 457888887766 777777654 489999999999998887777765 32 2358888888753
No 353
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=57.62 E-value=40 Score=30.89 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=44.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+.+|.+++.++.+...+...+ .++.++..|+.+
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 88 (283)
T 3v8b_A 28 SPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG---GQAIALEADVSD 88 (283)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 356787887665 777777654 58999999999998887777665433 468888888754
No 354
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=57.09 E-value=33 Score=30.76 Aligned_cols=59 Identities=17% Similarity=0.084 Sum_probs=43.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+...++..+ .++.++..|+.+
T Consensus 6 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 66 (257)
T 3imf_A 6 EKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP---GQILTVQMDVRN 66 (257)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST---TCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 446777776554 787777654 58999999999999888777765433 478889998754
No 355
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=56.92 E-value=42 Score=30.54 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=44.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 24 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 84 (279)
T 3sju_A 24 PQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCDVTS 84 (279)
T ss_dssp -CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 357888886655 777777654 48999999999998888777776543 368888888753
No 356
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=55.99 E-value=13 Score=34.05 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=39.6
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..+|=.|.++| |+..++..+ .+++|++++.+++.++...+.+... .++.++..|+.+
T Consensus 22 k~vlVTGas~g-IG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d 80 (272)
T 2nwq_A 22 STLFITGATSG-FGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRD 80 (272)
T ss_dssp CEEEESSTTTS-SHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTC
T ss_pred cEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCC
Confidence 46777776655 676666654 4899999999998877665554321 358888888653
No 357
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=55.96 E-value=12 Score=35.38 Aligned_cols=41 Identities=12% Similarity=-0.082 Sum_probs=29.4
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++ ..+++|+++|.+++-++.|++
T Consensus 177 g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSSTTHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHHHHHHHHh
Confidence 45788788764 444444554 457899999999988887754
No 358
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=55.62 E-value=47 Score=29.19 Aligned_cols=59 Identities=17% Similarity=0.092 Sum_probs=43.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++ -|+..++..+ .+++|++++.+++.++.....++..+ .++.++..|..+
T Consensus 5 ~k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISD 65 (247)
T ss_dssp TCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCC
Confidence 34677777554 4777776654 48999999999998888777776654 368888888653
No 359
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=54.53 E-value=19 Score=33.93 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=30.5
Q ss_pred CCeEEEECCcc-cHHHHHHHhhc-cCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASL-LGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~-~~~~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++.. ++++|+++|.+++.++.|++
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 35789999853 44444555543 28899999999998888865
No 360
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=54.27 E-value=22 Score=34.30 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=29.9
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcCCHHHHHHHHH
Confidence 45788888765 5555556554 466 89999999999888854
No 361
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=54.11 E-value=50 Score=29.05 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=42.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc---cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~---~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.| |+|.|+..++..+ .+++|++++.++..++.+.+.+...+ .++.++..|+.+
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~ 65 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDD 65 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCC
Confidence 34677666 4566887777654 57899999999888877777766543 368888888653
No 362
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=53.74 E-value=60 Score=29.19 Aligned_cols=59 Identities=22% Similarity=0.099 Sum_probs=43.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.+ |.|+..++..+ .+++|+++|.++..++...+.++..+ .++.++..|..+
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~ 91 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSN 91 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCCC
Confidence 4567777755 55787777654 47899999999988877766666543 368888888653
No 363
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=53.68 E-value=58 Score=29.93 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=44.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc------------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+...++..+ .++.++..|+.+
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 3457888887766 777777654 58999999987 777776666666554 468899998754
No 364
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=53.58 E-value=63 Score=28.40 Aligned_cols=59 Identities=12% Similarity=0.062 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.++..++...+.++..+ .++.++..|..+
T Consensus 13 ~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~ 73 (260)
T 3awd_A 13 NRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVTN 73 (260)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCC
Confidence 3567777765 55787777654 47899999999887776666665543 368888888653
No 365
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=53.52 E-value=54 Score=29.34 Aligned_cols=61 Identities=16% Similarity=0.088 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|++++.+++.++.+.+.+.... ...++.++..|..+
T Consensus 13 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~ 75 (267)
T 1iy8_A 13 DRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVSD 75 (267)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTTS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCCC
Confidence 457888886654 777776654 48899999999988876666654431 12368888888653
No 366
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=53.47 E-value=64 Score=28.58 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=42.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 7 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~ 67 (247)
T 2jah_A 7 GKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVAD 67 (247)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 356787886655 777777654 48999999999988877766665543 368888888653
No 367
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=53.33 E-value=82 Score=28.25 Aligned_cols=60 Identities=17% Similarity=0.035 Sum_probs=44.0
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc------------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++..+ .+++|+.+|.+ .+.++.+...+...+ .++.++..|+.+
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTTC
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCCC
Confidence 3457888887766 777777654 48999999987 777777776666554 468899988754
No 368
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=52.99 E-value=61 Score=29.31 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=42.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|++.| |+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..+
T Consensus 22 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~ 82 (277)
T 2rhc_B 22 SEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRS 82 (277)
T ss_dssp SCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 357888886654 777776654 48899999999988877666665543 358888888653
No 369
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=52.98 E-value=24 Score=33.45 Aligned_cols=41 Identities=22% Similarity=0.291 Sum_probs=29.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+++.+++. .++ +|+++|.+++-++.|++
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH
Confidence 45788899764 4454555543 577 99999999998888753
No 370
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=52.94 E-value=36 Score=30.36 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHhhc-----cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~-----~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|++++.+++.++.+.+.+.... -..++.++..|+.+
T Consensus 6 ~k~~lVTGas~g-IG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 6 CAVCVLTGASRG-FGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLGT 71 (259)
T ss_dssp SEEEEESSCSSH-HHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTTS
T ss_pred CcEEEEeCCCCh-HHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCCC
Confidence 345676676655 777777654 58999999999988877666665421 12368888888653
No 371
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=51.92 E-value=18 Score=41.51 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=33.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhccCC--EEEEEeCcHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~~~~--~v~gvDid~~al~~A~~Ni 159 (384)
...++||+-||+|.+..-+ ...|+ .+.|+|+++.|++.-+.|.
T Consensus 850 ~~l~viDLFsG~GGlslGf--e~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGF--HQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHH--HHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHH--HHCCCCceEEEEECCHHHHHHHHHhC
Confidence 4578999999999886544 45565 4779999999998877773
No 372
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=51.79 E-value=62 Score=29.29 Aligned_cols=60 Identities=18% Similarity=0.142 Sum_probs=43.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc----------------HHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT----------------DVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid----------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
....+|=.|+++| |+..++..+ .+++|+++|.+ ++.++.+.+.+...+ .++.++..|+
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 85 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN---RRIVTAEVDV 85 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT---CCEEEEECCT
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC---CceEEEEcCC
Confidence 3457888888766 777777654 58999999987 677766665555443 4688899887
Q ss_pred CC
Q 016734 177 SE 178 (384)
Q Consensus 177 ~~ 178 (384)
.+
T Consensus 86 ~~ 87 (286)
T 3uve_A 86 RD 87 (286)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 373
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=51.71 E-value=13 Score=39.77 Aligned_cols=45 Identities=16% Similarity=0.063 Sum_probs=33.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhc----cCC-EEEEEeCcHHHHHHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL----LGW-SFVGSDMTDVALEWAEKNV 159 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~----~~~-~v~gvDid~~al~~A~~Ni 159 (384)
++.++|||-||+|.++.-+-+.. .+. -+.|+|+|+.|++.=+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 45789999999998865553322 113 4679999999998888773
No 374
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=50.82 E-value=54 Score=29.43 Aligned_cols=61 Identities=10% Similarity=-0.009 Sum_probs=44.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.++..+ ..++.++..|+.+
T Consensus 9 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 9 QGRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVSD 71 (262)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTTS
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCCC
Confidence 3456777776554 787777654 58899999999999888777776543 2468889988753
No 375
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=50.63 E-value=59 Score=29.22 Aligned_cols=60 Identities=18% Similarity=0.106 Sum_probs=42.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc------------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+.+.+...+ .++.++..|+.+
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTTC
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCCC
Confidence 3457888886655 777777654 58999999987 777776666665543 368899998754
No 376
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=50.48 E-value=69 Score=28.58 Aligned_cols=59 Identities=25% Similarity=0.138 Sum_probs=42.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 67 (262)
T 1zem_A 7 GKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTS 67 (262)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 356787777655 777777654 48899999999988877666665433 368888888653
No 377
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=50.42 E-value=28 Score=32.84 Aligned_cols=43 Identities=19% Similarity=0.327 Sum_probs=30.1
Q ss_pred CCCeEEEECCccc--HHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 115 DKVKGFDIGTGAN--CIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 115 ~~~~vLDIGtGsG--~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
...+||-+|+|+| .....+++...+++|+++|.+++.++.+++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3458999998744 233334443338899999999998888754
No 378
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.39 E-value=67 Score=28.98 Aligned_cols=60 Identities=15% Similarity=0.126 Sum_probs=43.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-------------cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-------------d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+++|. +++.++.+.+.+...+ .++.++..|+.+
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVLDVRD 88 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEcCCCC
Confidence 3457888887766 777777654 5899999998 6777777766666543 468888888653
No 379
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.94 E-value=53 Score=29.70 Aligned_cols=62 Identities=10% Similarity=-0.036 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++ .|+..++..+ .+++|++++.+++.++.+.+.+...+....++.++..|+.+
T Consensus 6 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 6 NKTVIITGSSN-GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69 (280)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC
Confidence 34677777554 4777777654 48999999999988877666665433111268888888653
No 380
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=49.72 E-value=73 Score=28.34 Aligned_cols=59 Identities=19% Similarity=0.031 Sum_probs=42.2
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.+. .|+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 9 ~k~vlVTGas~-giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 69 (260)
T 2ae2_A 9 GCTALVTGGSR-GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLSS 69 (260)
T ss_dssp TCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 35688777654 4777777654 48899999999988876666665443 368888888653
No 381
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=49.57 E-value=29 Score=32.76 Aligned_cols=41 Identities=22% Similarity=0.178 Sum_probs=29.1
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++ ..+++|+++|.+++.++.|++
T Consensus 169 g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHH
Confidence 45788888754 444444544 457889999999998888753
No 382
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=49.51 E-value=16 Score=36.72 Aligned_cols=83 Identities=10% Similarity=0.140 Sum_probs=52.9
Q ss_pred cCCCccCCCcCH-----HHHHHHHHHHhccCCCCCCCCCCCCCeEEEECCcccHHHHHHHhhcc-----CCEEEEEeCcH
Q 016734 80 PDGQLCPTVPNR-----SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-----GWSFVGSDMTD 149 (384)
Q Consensus 80 p~~~LiPrvP~r-----~~yi~~i~dll~~~~~~~~~~~~~~~~vLDIGtGsG~I~~~La~~~~-----~~~v~gvDid~ 149 (384)
+.|-++-. |+- +..-.|+.+.+... .+..++|+|.|+|.+..-+..... ..+++.||+|+
T Consensus 107 ~~GDFiTA-PeiS~~FGe~la~~~~~~~~~~---------g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp 176 (432)
T 4f3n_A 107 DGSDFVTA-PELSPLFAQTLARPVAQALDAS---------GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSG 176 (432)
T ss_dssp ---CCSSC-GGGHHHHHHHHHHHHHHHHHHH---------TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTS
T ss_pred CCCCccCc-hhhhHHHHHHHHHHHHHHHHhc---------CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCH
Confidence 45677766 664 34456666666542 146899999999998766543321 34899999999
Q ss_pred HHHHHHHHHHHHC-CCCCCceEEE
Q 016734 150 VALEWAEKNVKSN-PHISELIEIR 172 (384)
Q Consensus 150 ~al~~A~~Ni~~n-~~l~~~I~~~ 172 (384)
...+.-++.+... ..+..+|.++
T Consensus 177 ~Lr~~Q~~~L~~~~~~~~~~v~W~ 200 (432)
T 4f3n_A 177 ELRARQRETLGAQAPGLAARVRWL 200 (432)
T ss_dssp SSHHHHHHHHHHHSTTTGGGEEEE
T ss_pred HHHHHHHHHHhccccccCCCceec
Confidence 8877777776542 1133466664
No 383
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=49.19 E-value=41 Score=30.34 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=43.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.++.+++.++.+.+.+... ...++.++..|+.+
T Consensus 20 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~ 81 (266)
T 4egf_A 20 GKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLAE 81 (266)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCC
Confidence 456777776655 777777654 5899999999999888777666542 12368899998754
No 384
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=48.87 E-value=80 Score=28.38 Aligned_cols=59 Identities=14% Similarity=0.007 Sum_probs=42.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.+.| |+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 21 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 81 (273)
T 1ae1_A 21 GTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLS 81 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 457888886544 777777654 48899999999988876666665443 358888888653
No 385
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=48.80 E-value=61 Score=29.20 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=41.2
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|+++| |+..++..+ .+++|+.+|.+++.++.+.+.+ ..++.++..|+.+
T Consensus 30 ~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~ 87 (281)
T 3ppi_A 30 GASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVTS 87 (281)
T ss_dssp TEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTC
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEcCCCC
Confidence 456787887665 777777654 5899999999998877665544 2368899998753
No 386
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=48.52 E-value=20 Score=34.37 Aligned_cols=41 Identities=20% Similarity=0.097 Sum_probs=29.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++ ..+++|+++|.+++.++.|++
T Consensus 195 g~~VlV~GaG~vG~~aiqlak-~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHH
Confidence 45788889864 444444554 358899999999998888864
No 387
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=47.99 E-value=63 Score=28.13 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=41.6
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|.++ .|+..++.++ .+++|+.++.+++.++.+.+.+... ...++.++..|+.+
T Consensus 3 k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~ 63 (235)
T 3l77_A 3 KVAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--QGVEVFYHHLDVSK 63 (235)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTC
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCeEEEEEeccCC
Confidence 3566677654 4787777665 4789999999998887776666422 12368888888753
No 388
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=47.95 E-value=84 Score=28.28 Aligned_cols=60 Identities=15% Similarity=0.124 Sum_probs=43.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-------------cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-------------d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+++|. +++.++.+.+.+...+ .++.++..|..+
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 84 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAVVDTRD 84 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCC
Confidence 3457888887766 777776654 5899999998 6777777766666544 368888888653
No 389
>1wey_A Calcipressin 1; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=47.90 E-value=8.9 Score=31.14 Aligned_cols=62 Identities=21% Similarity=0.318 Sum_probs=41.9
Q ss_pred CHHHHHhhCCCcccceeccCCCCccccCCCHHHHHHHHHHHh----------hccCCcEEEecCCCccCCCcC
Q 016734 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL----------LHDHGLNWWIPDGQLCPTVPN 90 (384)
Q Consensus 28 df~~La~~~p~l~~~v~~~~~g~~~idf~~~~av~~Lt~alL----------~~~fgl~~~vp~~~LiPrvP~ 90 (384)
-|.+|-.+|.+...|.....-.|+.|+|+++++-..- |..| +-+||-...+....|-|+-|+
T Consensus 26 ~~e~Lf~~~~~~~tF~~lkSFRRirv~F~~~~~A~~A-R~~Lh~~~f~g~~~r~YFgq~~~~~~~~L~pP~p~ 97 (104)
T 1wey_A 26 KFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADA-RLRLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPD 97 (104)
T ss_dssp HHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHH-HHTSTTSEETTEECEEECCCCSSCCSCCSCCCCCC
T ss_pred HHHHHHHhhCcCcceeecCcceEEEEEeCChHHHHHH-HHHhccceecCceeEEEecCCCCCcccccCCCCcc
Confidence 4788999999888888877778999999998875433 3233 223444334445566666554
No 390
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=47.67 E-value=44 Score=30.44 Aligned_cols=59 Identities=10% Similarity=0.028 Sum_probs=43.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.++.+++.++...+.+...+ .++.++..|+.+
T Consensus 32 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d 92 (276)
T 3r1i_A 32 GKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVTQ 92 (276)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTTC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCC
Confidence 457887887655 777777654 48999999999988887777776554 368888888754
No 391
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=47.54 E-value=55 Score=29.19 Aligned_cols=58 Identities=14% Similarity=-0.056 Sum_probs=41.3
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..+|=.|+++ .|+..++..+ .+++|+.++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 6 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 65 (260)
T 2qq5_A 6 QVCVVTGASR-GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSSQ 65 (260)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTTS
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCCC
Confidence 4677777554 4787777654 48999999999988876666555433 368888888653
No 392
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=46.92 E-value=52 Score=29.85 Aligned_cols=59 Identities=15% Similarity=0.069 Sum_probs=42.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|++++.+++.++.....+...+ .++.++..|+.+
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 88 (270)
T 3ftp_A 28 KQVAIVTGASRG-IGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVND 88 (270)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCCC
Confidence 456776775554 777777654 58999999999998887777776554 257788888653
No 393
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=46.92 E-value=36 Score=31.86 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=30.3
Q ss_pred CCeEEEECCcccH-HHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGsG~-I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|++. ++..+++...+.+|+++|.+++-++.|++
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 3467778887653 44445555678899999999988777654
No 394
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=46.81 E-value=88 Score=28.40 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=43.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|+++| |+..++..+ .+++|+.+|. +++.++...+.+...+ .++.++..|+.+
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 90 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLAD 90 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 3457888887665 777777654 5899999996 7777777766666554 368899998754
No 395
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=46.72 E-value=34 Score=31.18 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=43.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..+
T Consensus 33 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 93 (275)
T 4imr_A 33 GRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSE 93 (275)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCC
Confidence 456777776655 777777654 58999999999988877777776554 368888888653
No 396
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=46.53 E-value=74 Score=29.21 Aligned_cols=58 Identities=10% Similarity=0.073 Sum_probs=37.8
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+.+.+|=-|.++| |+..++..+ .+++|+.+|.+.. +.+.+-++..+ .++..+..|+.+
T Consensus 8 ~GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g---~~~~~~~~Dv~d 67 (247)
T 4hp8_A 8 EGRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG---GNASALLIDFAD 67 (247)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC---CcEEEEEccCCC
Confidence 3456676677766 777777655 5899999998743 23334444444 357888888653
No 397
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=46.23 E-value=81 Score=28.91 Aligned_cols=59 Identities=12% Similarity=0.011 Sum_probs=42.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.+. .|+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 34 ~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 94 (291)
T 3cxt_A 34 GKIALVTGASY-GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG---INAHGYVCDVTD 94 (291)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTC
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEecCCC
Confidence 45688788654 4777777654 48899999999988876666665543 357888888653
No 398
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=46.16 E-value=63 Score=29.23 Aligned_cols=61 Identities=13% Similarity=0.016 Sum_probs=43.1
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+.++.+.+.++.+...+... ...++.++..|+.+
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 26 RDKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRA 88 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCC
Confidence 3457888887665 777777654 5789999999988777665555432 12368889888754
No 399
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=46.01 E-value=60 Score=28.39 Aligned_cols=59 Identities=15% Similarity=0.046 Sum_probs=41.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|. +|.|+..++..+ .+++|++++.++..++...+.+...+ .++.++..|..+
T Consensus 11 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 71 (255)
T 1fmc_A 11 GKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITS 71 (255)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCCC
Confidence 346776664 466888777654 47899999999988776666665543 368888888653
No 400
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=45.76 E-value=34 Score=31.33 Aligned_cols=59 Identities=12% Similarity=-0.025 Sum_probs=42.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 8 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 68 (280)
T 3tox_A 8 GKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG---GEAAALAGDVGD 68 (280)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT---CCEEECCCCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 456777777655 777777654 58999999999998887777665433 468888887653
No 401
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=45.56 E-value=75 Score=28.31 Aligned_cols=60 Identities=12% Similarity=-0.026 Sum_probs=40.9
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|++. .|+..++..+ .+++|++++.+++.++.+...+.... -..++.++..|..+
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~ 69 (267)
T 2gdz_A 8 KVALVTGAAQ-GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVAD 69 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTTS
T ss_pred CEEEEECCCC-cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCCC
Confidence 4677788654 4777777654 48999999999887766555554321 12368888888653
No 402
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.51 E-value=27 Score=27.49 Aligned_cols=38 Identities=21% Similarity=0.053 Sum_probs=26.6
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAE 156 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~ 156 (384)
.+|+=+|+ |.++..++..+ .+++|+++|.+++.++.+.
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~ 44 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS 44 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 35666665 66776666544 4789999999988765443
No 403
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.50 E-value=71 Score=29.36 Aligned_cols=62 Identities=15% Similarity=0.011 Sum_probs=42.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.+. .|+..++..+ .+++|++++.+++.++.+...+...+....++.++..|+.+
T Consensus 26 ~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 26 GKSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 34677777654 4787777654 48999999999988877666665543112268888888653
No 404
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=45.35 E-value=29 Score=31.10 Aligned_cols=53 Identities=9% Similarity=0.104 Sum_probs=34.8
Q ss_pred EEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 119 GFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 119 vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+|=.|.+ |.|+..++..+ .+++|++++.+++.++...+.+. .++.++..|..+
T Consensus 3 vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~ 57 (248)
T 3asu_A 3 VLVTGAT-AGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRN 57 (248)
T ss_dssp EEETTTT-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTC
T ss_pred EEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCC
Confidence 4444544 44676666554 48999999999887765544331 358888888653
No 405
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=44.45 E-value=68 Score=29.02 Aligned_cols=60 Identities=12% Similarity=-0.020 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++.....+...+ ..++.++..|..+
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTMED 89 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTTC
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCCC
Confidence 3467877755 45787777654 47899999999988877666555433 1358888888653
No 406
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=44.22 E-value=1e+02 Score=27.27 Aligned_cols=57 Identities=19% Similarity=0.209 Sum_probs=40.4
Q ss_pred eEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.+|=.|.++| |+..++..+ .+++|++++.+++.++...+.+...+ .++.++..|..+
T Consensus 4 ~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 62 (256)
T 1geg_A 4 VALVTGAGQG-IGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSD 62 (256)
T ss_dssp EEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred EEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 5666775544 777777654 47899999999988776666665443 358888888653
No 407
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=44.08 E-value=1e+02 Score=27.67 Aligned_cols=60 Identities=15% Similarity=0.023 Sum_probs=42.9
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc------------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|+++| |+..++..+ .+++|+.+|.+ .+.++.....+...+ .++.++..|+.+
T Consensus 9 ~~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 82 (281)
T 3s55_A 9 EGKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG---RRCISAKVDVKD 82 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC---CeEEEEeCCCCC
Confidence 3457888887665 787777655 58999999986 666666666665544 368888888753
No 408
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.56 E-value=83 Score=28.16 Aligned_cols=61 Identities=11% Similarity=-0.008 Sum_probs=41.3
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..+|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+........++.++..|..+
T Consensus 7 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (278)
T 1spx_A 7 KVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69 (278)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC
Confidence 457766765 44787777654 48999999999988776666553221123468888888653
No 409
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=43.44 E-value=84 Score=29.15 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=42.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc------------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid------------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+++|.+ ++.++.+.+.+...+ .++.++..|+.+
T Consensus 46 gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 118 (317)
T 3oec_A 46 GKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVRD 118 (317)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCC
Confidence 456777777655 777777654 58999999986 677776666665554 368888888753
No 410
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=43.36 E-value=45 Score=30.30 Aligned_cols=59 Identities=8% Similarity=0.043 Sum_probs=43.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ .++.++..|+.+
T Consensus 26 gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 86 (271)
T 4ibo_A 26 GRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVTS 86 (271)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCC
Confidence 456777775544 787777654 58999999999998888777776654 368888888653
No 411
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=43.35 E-value=94 Score=27.54 Aligned_cols=59 Identities=8% Similarity=-0.023 Sum_probs=41.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..+
T Consensus 14 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~ 74 (260)
T 2zat_A 14 NKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVGK 74 (260)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCC
Confidence 3467767755 45787777654 47899999999988776666665543 358888888653
No 412
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=42.98 E-value=94 Score=27.58 Aligned_cols=59 Identities=15% Similarity=0.020 Sum_probs=41.1
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHC-CCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n-~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|++++.+++.++.+.+.+... + .++.++..|..+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~D~~~ 68 (263)
T 3ai3_A 7 GKVAVITGSSSG-IGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG---VRVLEVAVDVAT 68 (263)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC---CceEEEEcCCCC
Confidence 346777776654 777777654 4789999999998777665555432 2 358888888653
No 413
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=42.43 E-value=91 Score=27.94 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=42.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|+++| |+..++.++ .+++|+.++. ++...+...+.++..+ .++.++..|..+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 90 (271)
T 4iin_A 29 GKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG---YKAAVIKFDAAS 90 (271)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 456777777665 777777654 5899999998 6666666666666554 368899988653
No 414
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=42.33 E-value=74 Score=28.94 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=37.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEE-EcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~-~~d~~ 177 (384)
..+||=.|+ +|.|+..++..+ .+++|++++.++...+.....+... ...++.++ .+|..
T Consensus 11 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 11 GSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK--YPGRFETAVVEDML 72 (342)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--STTTEEEEECSCTT
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc--CCCceEEEEecCCc
Confidence 356777764 477888777654 4789999999987665443333221 11357877 67754
No 415
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=42.16 E-value=32 Score=32.83 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=30.9
Q ss_pred CCeEEEEC-Cc-ccHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIG-TG-ANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIG-tG-sG~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||=+| +| .|.+++.+++...+.+|+++|.+++-++.|++
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 45788787 44 35566666665568899999999998888754
No 416
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=41.90 E-value=58 Score=29.73 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=42.1
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ ...+.++..|+.+
T Consensus 33 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d 94 (281)
T 4dry_A 33 GRIALVTGGGTG-VGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGD 94 (281)
T ss_dssp -CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCC
Confidence 456777776544 787777664 58999999999998887776665432 1246888888653
No 417
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=41.82 E-value=31 Score=34.33 Aligned_cols=60 Identities=10% Similarity=-0.033 Sum_probs=38.6
Q ss_pred CCCeEEEECCcccHHHHH--HHhhcc--CCEEEEEeCcHHH------------HHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPL--LGASLL--GWSFVGSDMTDVA------------LEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~--La~~~~--~~~v~gvDid~~a------------l~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|+++| |+.. ++..+. +++|++++.+... .+.+.+-++..+ .++..+..|+.+
T Consensus 59 ~gK~aLVTGassG-IG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dvtd 134 (418)
T 4eue_A 59 GPKKVLIVGASSG-FGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---LVAKNFIEDAFS 134 (418)
T ss_dssp CCSEEEEESCSSH-HHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---CcEEEEEeeCCC
Confidence 4567888898887 6766 666554 8999999875432 123333334444 357888888653
No 418
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=41.27 E-value=94 Score=27.69 Aligned_cols=56 Identities=11% Similarity=0.046 Sum_probs=40.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++...+.+ ..++.++..|..+
T Consensus 8 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~ 65 (255)
T 4eso_A 8 GKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALRSDIAD 65 (255)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCCC
Confidence 457888887665 777777654 5899999999998876655543 2368888888653
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=40.50 E-value=24 Score=33.61 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=28.7
Q ss_pred CeEEEECCcccHHHHHHHhh--ccCCEEEEEeCcHHHHHHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGAS--LLGWSFVGSDMTDVALEWAEKNVK 160 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~--~~~~~v~gvDid~~al~~A~~Ni~ 160 (384)
.+|-=||+| .++..+|.. ..+.+|++.|++++.++.+.+.+.
T Consensus 7 ~kI~vIGaG--~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~ 50 (319)
T 2dpo_A 7 GDVLIVGSG--LVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred ceEEEEeeC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 356667665 444444332 347899999999999998877654
No 420
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=40.22 E-value=1.1e+02 Score=26.93 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=40.4
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|.+ |.|+..++..+ .+++|++++. +++.++.+.+.+...+ .++.++..|..+
T Consensus 5 k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 65 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVAN 65 (246)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 456666655 45787777654 5889999999 8887776666665443 358888888653
No 421
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=40.15 E-value=1.1e+02 Score=28.73 Aligned_cols=58 Identities=10% Similarity=-0.011 Sum_probs=43.0
Q ss_pred CeEEEECCcccHHHHHHHhhcc-CCEEEEEeCcHHHHHHHHHHHHHCCC-CCCceEEEEcCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPH-ISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~~-~~~v~gvDid~~al~~A~~Ni~~n~~-l~~~I~~~~~d~~ 177 (384)
..||+||||-=.-+-.+. .+ +.+++=+| .|+.++..++-+...+. -.++..++..|..
T Consensus 104 ~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~ 163 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLR 163 (310)
T ss_dssp CEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTT
T ss_pred CeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchH
Confidence 479999999887644432 23 47899999 79999999999986542 2356788888865
No 422
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=39.65 E-value=1.3e+02 Score=27.10 Aligned_cols=62 Identities=15% Similarity=0.027 Sum_probs=43.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCC--CCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNP--HISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~--~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.+.... ....++.++..|..+
T Consensus 18 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 18 GQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN 83 (303)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC
Confidence 4578888855 55887777654 57899999999988877766665521 012368889888653
No 423
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=39.63 E-value=1e+02 Score=26.83 Aligned_cols=59 Identities=17% Similarity=0.025 Sum_probs=42.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
+...+|=.|+++| |+..++..+ .+++|+.++.++..++.+.+.+...+ ...+.++..|.
T Consensus 13 ~~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGAARG-IGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNL 73 (247)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEecc
Confidence 3456777776654 777777654 57899999999999888887777654 23466776664
No 424
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=38.91 E-value=54 Score=30.28 Aligned_cols=60 Identities=10% Similarity=-0.024 Sum_probs=43.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|+.+
T Consensus 41 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d 102 (293)
T 3rih_A 41 ARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVSD 102 (293)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCCC
Confidence 456777776655 777777654 58999999999988877776665443 2468889998754
No 425
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=38.91 E-value=64 Score=28.55 Aligned_cols=60 Identities=10% Similarity=-0.099 Sum_probs=41.6
Q ss_pred CCCeEEEECCc-ccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTG-ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtG-sG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.+ +|.|+..++..+ .+++|+.++.+....+.+++-.+..+ .+.++..|+.+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~~ 75 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVAD 75 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCCC
Confidence 45678888875 355787777654 58999999998666565555555543 37788888653
No 426
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.85 E-value=1.2e+02 Score=27.25 Aligned_cols=60 Identities=13% Similarity=-0.022 Sum_probs=41.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHH-HHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNV-KSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni-~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|++++.+++.++.+...+ +..+ .++.++..|..+
T Consensus 20 ~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~ 82 (267)
T 1vl8_A 20 RGRVALVTGGSRG-LGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG---VETMAFRCDVSN 82 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CeEEEEEcCCCC
Confidence 3456787786544 787777654 5899999999988877665555 3222 357888888653
No 427
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.81 E-value=90 Score=28.36 Aligned_cols=56 Identities=21% Similarity=0.166 Sum_probs=39.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+...+ + .++.++..|+.+
T Consensus 29 gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d 86 (277)
T 3gvc_A 29 GKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKI---G---CGAAACRVDVSD 86 (277)
T ss_dssp TCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCCC
Confidence 456777776655 777776654 5899999999998877665544 2 357888888653
No 428
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=38.75 E-value=1.1e+02 Score=27.47 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=42.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.++..++.+.+.+.... ..++.++..|..+
T Consensus 26 ~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 26 GKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRD 87 (302)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCC
Confidence 4567777765 45787777654 47899999999988776665554320 2368889998653
No 429
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.58 E-value=1.1e+02 Score=27.52 Aligned_cols=59 Identities=14% Similarity=-0.005 Sum_probs=41.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.++. ++..++...+.++..+ .++.++..|+.+
T Consensus 28 ~k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d 89 (269)
T 4dmm_A 28 DRIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQ 89 (269)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 456777776655 777777654 5899999998 7777776666666544 368888888754
No 430
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=38.47 E-value=72 Score=27.77 Aligned_cols=54 Identities=24% Similarity=0.118 Sum_probs=35.1
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..++|=.|.+. .|+..++..+ .+++|++++.+++.++...+. .. .+.++..|..
T Consensus 7 ~k~vlITGasg-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~----~~~~~~~D~~ 62 (244)
T 3d3w_A 7 GRRVLVTGAGK-GIGRGTVQALHATGARVVAVSRTQADLDSLVRE---CP----GIEPVCVDLG 62 (244)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---ST----TCEEEECCTT
T ss_pred CcEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cC----CCCEEEEeCC
Confidence 34677777654 4787777654 578999999998766543332 11 2556677754
No 431
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=38.39 E-value=1.1e+02 Score=27.76 Aligned_cols=60 Identities=13% Similarity=0.077 Sum_probs=42.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+.+|. +++.++.....+... ...++.++..|+.+
T Consensus 25 ~k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 25 TKTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL--SSGTVLHHPADMTK 87 (281)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT--CSSCEEEECCCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc--cCCcEEEEeCCCCC
Confidence 457888887655 777777654 5889999998 777776666666543 13468888888653
No 432
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=37.87 E-value=1.4e+02 Score=26.50 Aligned_cols=61 Identities=15% Similarity=-0.024 Sum_probs=41.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.+.| |+..++..+ .+++|++++.+++.++.+.+.+.... -..++.++..|..+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~ 69 (260)
T 2z1n_A 7 GKLAVVTAGSSG-LGFASALELARNGARLLLFSRNREKLEAAASRIASLV-SGAQVDIVAGDIRE 69 (260)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-TTCCEEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEEccCCC
Confidence 346777786654 777777654 48899999999988776655554320 01258888888653
No 433
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=37.82 E-value=75 Score=28.81 Aligned_cols=57 Identities=12% Similarity=-0.007 Sum_probs=39.7
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
...+|=.|.+.| |+..++..+ .+++|+++|.+++.++...+.+... . ++.++..|+.
T Consensus 29 ~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~-~~~~~~~Dv~ 87 (276)
T 2b4q_A 29 GRIALVTGGSRG-IGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---G-DCQAIPADLS 87 (276)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS---S-CEEECCCCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---C-ceEEEEeeCC
Confidence 456787786544 777777654 4799999999998776655555332 1 5777777764
No 434
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=37.80 E-value=88 Score=27.74 Aligned_cols=59 Identities=8% Similarity=0.003 Sum_probs=42.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~ 176 (384)
....+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|.
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDL 71 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEec
Confidence 3457777886655 777777654 58999999999998887766665432 12577888886
No 435
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=37.79 E-value=1.1e+02 Score=26.75 Aligned_cols=55 Identities=15% Similarity=-0.016 Sum_probs=40.0
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+.+. .++.++..|..+
T Consensus 4 k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~ 60 (235)
T 3l6e_A 4 GHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG------NAVIGIVADLAH 60 (235)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTTS
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------CCceEEECCCCC
Confidence 35777787655 787777654 58999999999988776655541 248888888653
No 436
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=37.79 E-value=95 Score=27.70 Aligned_cols=59 Identities=14% Similarity=-0.006 Sum_probs=42.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEE-eCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gv-Did~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|+++| |+..++.++ .+++|+.+ +.+.+.++.+.+.++..+ .++.++..|+.+
T Consensus 8 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 69 (259)
T 3edm_A 8 NRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTN 69 (259)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCC
Confidence 457888887766 777777654 48899988 777777777666665543 468888888754
No 437
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=37.76 E-value=1.2e+02 Score=26.76 Aligned_cols=58 Identities=10% Similarity=-0.037 Sum_probs=41.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++.....+...+ .++.++..|..
T Consensus 14 ~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 73 (266)
T 1xq1_A 14 AKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDAS 73 (266)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCC
Confidence 3467766654 55787777654 47899999999988777666665543 35888888865
No 438
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=37.70 E-value=79 Score=27.44 Aligned_cols=54 Identities=24% Similarity=0.105 Sum_probs=35.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..++|=.|++ |.|+..++.++ .+++|++++.++..++...+. . ..++++..|..
T Consensus 7 ~~~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~~D~~ 62 (244)
T 1cyd_A 7 GLRALVTGAG-KGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C----PGIEPVCVDLG 62 (244)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S----TTCEEEECCTT
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c----cCCCcEEecCC
Confidence 3467777754 55787777654 588999999998766543321 1 13566677754
No 439
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=37.41 E-value=58 Score=34.99 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=49.6
Q ss_pred CccccCCCHHHHHHHHHHH--hhccCCcE-EEecCCCcc-----CCC-cCH-----HHHHHHHHHHhccCCCCCCCCCCC
Q 016734 50 RPRIDWTDFNATRELTRVL--LLHDHGLN-WWIPDGQLC-----PTV-PNR-----SNYIHWIEDLLSSNIIPTTSRNGD 115 (384)
Q Consensus 50 ~~~idf~~~~av~~Lt~al--L~~~fgl~-~~vp~~~Li-----Prv-P~r-----~~yi~~i~dll~~~~~~~~~~~~~ 115 (384)
.+-+||++|+++..+...+ +...||++ |.++-+.-+ +-. |++ -.|+.-+.+++.... ...
T Consensus 446 ~~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr~i~~~~~~~~~~~~q~~~~~~y~~g~y~ll~~l~------~~~ 519 (745)
T 3mi6_A 446 QFVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTSDQQLELPHRYILGVYQLYARLT------QAY 519 (745)
T ss_dssp CEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHH------HHC
T ss_pred eEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCcccCCCcCccccccHHHHHHHHHHHHHHHHHH------hhC
Confidence 3459999999999998877 34567774 344433222 211 222 245555544443210 013
Q ss_pred CCeEEEECCcccH-HHHHHHhhccCCEEEEEeCc
Q 016734 116 KVKGFDIGTGANC-IYPLLGASLLGWSFVGSDMT 148 (384)
Q Consensus 116 ~~~vLDIGtGsG~-I~~~La~~~~~~~v~gvDid 148 (384)
+..+++-|+|-|. +=.-+....+ ++-+.|-.
T Consensus 520 P~v~ie~CssGGgR~D~g~L~~~~--~~W~SD~t 551 (745)
T 3mi6_A 520 PNVLFESCASGGGRFDLGMMYYAP--QAWTSDDT 551 (745)
T ss_dssp TTCEEEECSTTTSSCSHHHHHHSS--EEECCSCC
T ss_pred CCeEEEecCCCCCccChhHHhcCC--ccccCCCC
Confidence 4568888777664 3233333333 56666654
No 440
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=37.24 E-value=1.4e+02 Score=26.33 Aligned_cols=56 Identities=14% Similarity=0.067 Sum_probs=40.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++.++ .+++|++++.+++.++...+.+ ..++.++..|..+
T Consensus 9 ~k~vlITGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~ 66 (261)
T 3n74_A 9 GKVALITGAGSG-FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAADISK 66 (261)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEecCCC
Confidence 457888887765 677776654 4899999999998877655533 2368888888653
No 441
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=36.99 E-value=1.4e+02 Score=26.88 Aligned_cols=59 Identities=15% Similarity=-0.040 Sum_probs=42.2
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++.+.+.++..+ .++.++..|..+
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~d 104 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVSK 104 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC---CceeEEECCCCC
Confidence 3568877765 55788877765 47899999999887776666665433 368888888653
No 442
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=36.94 E-value=1e+02 Score=26.72 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=34.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCce-EEEEcCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELI-EIRKVDN 176 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I-~~~~~d~ 176 (384)
...+||=.|+ +|.|+..++..+ .+++|++++.++..++... .. .+ .++.+|.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~-----~~~~~~~~Dl 74 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER-----GASDIVVANL 74 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT-----TCSEEEECCT
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC-----CCceEEEccc
Confidence 3457887774 466888777654 4789999999987654321 12 36 7888874
No 443
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=36.62 E-value=41 Score=31.74 Aligned_cols=41 Identities=15% Similarity=0.015 Sum_probs=28.7
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++ ..++ +|+++|.+++.++.|++
T Consensus 167 g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECCCHHHHHHHHH
Confidence 34677778754 444444543 4577 89999999998888865
No 444
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=36.51 E-value=92 Score=27.55 Aligned_cols=56 Identities=18% Similarity=0.141 Sum_probs=40.0
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+...+ + .++.++..|+.+
T Consensus 6 gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~ 63 (247)
T 3rwb_A 6 GKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASI---G---KKARAIAADISD 63 (247)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEECCCCTTC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CceEEEEcCCCC
Confidence 457888887655 777777654 5899999999998876655443 2 357888887653
No 445
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.17 E-value=1.5e+02 Score=26.30 Aligned_cols=56 Identities=11% Similarity=0.045 Sum_probs=39.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++.| |+..++.++ .+++|+.+|.+++.++.+...+ ..++.++..|+.+
T Consensus 8 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~ 65 (259)
T 4e6p_A 8 GKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAAEI------GPAAYAVQMDVTR 65 (259)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCCceEEEeeCCC
Confidence 456787886654 787777654 4899999999988776655443 2357888888653
No 446
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=36.16 E-value=40 Score=32.09 Aligned_cols=41 Identities=20% Similarity=0.093 Sum_probs=28.7
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+++.+++. .++ +|+++|.+++.++.|++
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHH
Confidence 35788888754 4444445543 577 89999999988888753
No 447
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=36.04 E-value=39 Score=32.15 Aligned_cols=41 Identities=12% Similarity=0.002 Sum_probs=28.5
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+|+. .++ +|+++|.+++.++.|++
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH
Confidence 45788888754 3344445543 467 89999999988888753
No 448
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=35.97 E-value=1.3e+02 Score=26.12 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=39.6
Q ss_pred eEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
++|=.|.+ |.|+..++.++ .+++|++++.++..++.....+... ...++.++..|..+
T Consensus 4 ~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~ 63 (250)
T 2cfc_A 4 VAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA--YADKVLRVRADVAD 63 (250)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT--TGGGEEEEECCTTC
T ss_pred EEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCC
Confidence 56767754 55787777654 4789999999988776655554111 23468888888653
No 449
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=35.61 E-value=62 Score=30.89 Aligned_cols=41 Identities=20% Similarity=0.120 Sum_probs=29.4
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++ ..++ +|+++|.+++.++.|++
T Consensus 183 g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLAR-LAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 34677788754 444444554 4577 99999999999888865
No 450
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=35.49 E-value=1.1e+02 Score=27.15 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=39.2
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHH--HHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVA--LEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~a--l~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..+|=.|.++| |+..++..+ .+++|+.++.+++. ++...+.++..+ .++.++..|..+
T Consensus 3 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 64 (258)
T 3a28_C 3 KVAMVTGGAQG-IGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD---QKAVFVGLDVTD 64 (258)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 35676776544 777776654 48899999998876 655555554332 368888888653
No 451
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=35.49 E-value=1e+02 Score=27.65 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=43.3
Q ss_pred CCCeEEEECCccc-HHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGAN-CIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG-~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+.+.+|=-|.+++ -|+..++..+ .+++|+.+|.+++.++.+.+-++..+ ..++.++..|+.+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~ 69 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQS 69 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCC
Confidence 3456777775431 3676666654 58999999999998888877776543 2357888888653
No 452
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=35.40 E-value=41 Score=32.30 Aligned_cols=41 Identities=10% Similarity=-0.014 Sum_probs=29.4
Q ss_pred CeEEEECCcccHHHHHHHh--hccCCEEEEEeCcHHHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~--~~~~~~v~gvDid~~al~~A~~ 157 (384)
.+||=+|.|+|.++.+..+ +..+++|+++|.+++-++.+++
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 4677776666666654332 3357899999999999888864
No 453
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=35.31 E-value=27 Score=35.14 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=25.0
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWA 155 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A 155 (384)
.+|-=||+| .+++-+|..+ .+.+|+|+|+|++-++.-
T Consensus 22 ~~IaViGlG--YVGLp~A~~~A~~G~~V~g~Did~~kV~~l 60 (444)
T 3vtf_A 22 ASLSVLGLG--YVGVVHAVGFALLGHRVVGYDVNPSIVERL 60 (444)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred CEEEEEccC--HHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence 356566655 5665555443 478999999999877653
No 454
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=35.08 E-value=47 Score=28.24 Aligned_cols=40 Identities=8% Similarity=-0.034 Sum_probs=26.7
Q ss_pred CCeEEEECCcccHHHHHHHh--hccCCEEEEEeCcHHHHHHHH
Q 016734 116 KVKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAE 156 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~--~~~~~~v~gvDid~~al~~A~ 156 (384)
..+||-+|++.| |+..+++ +..+++|+++|.+++.++.++
T Consensus 39 g~~vlV~Ga~gg-iG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 39 GERVLIHSATGG-VGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEeeCCCh-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 457999985323 4433332 234789999999998876654
No 455
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=34.77 E-value=1.1e+02 Score=26.95 Aligned_cols=59 Identities=19% Similarity=-0.007 Sum_probs=41.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|. +|.|+..++..+ .+++|++++. ++..++.....++..+ .++.++..|..+
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~ 82 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISK 82 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCC
Confidence 346776665 466888777654 4789999998 8877766666665543 368888888653
No 456
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=34.76 E-value=30 Score=31.74 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=37.5
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
+.+.+|=-|.++| |+..++.++ .+++|+.+|++++.++. . ...++..+..|+.
T Consensus 10 ~GK~alVTGas~G-IG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~--~~~~~~~~~~Dv~ 64 (242)
T 4b79_A 10 AGQQVLVTGGSSG-IGAAIAMQFAELGAEVVALGLDADGVHA-------P--RHPRIRREELDIT 64 (242)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTTSTTS-------C--CCTTEEEEECCTT
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHhh-------h--hcCCeEEEEecCC
Confidence 3457788888877 777777655 58999999999765432 1 2346888888865
No 457
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=34.22 E-value=1.4e+02 Score=26.66 Aligned_cols=58 Identities=10% Similarity=0.057 Sum_probs=41.5
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEE-eCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gv-Did~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|.++| |+..++..+ .+++|+.+ +.+++.++.+.+.++..+ .++.++..|+.+
T Consensus 5 k~vlVTGas~g-IG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 65 (258)
T 3oid_A 5 KCALVTGSSRG-VGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVGQ 65 (258)
T ss_dssp CEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTTC
T ss_pred CEEEEecCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 46676676544 787777655 58898886 888888877776666443 468889998754
No 458
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=34.14 E-value=52 Score=31.48 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=30.6
Q ss_pred CeEEEECCcccHHHHHHHh--hccCCEEEEEeCcHHHHHHHHHHHHH
Q 016734 117 VKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAEKNVKS 161 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~--~~~~~~v~gvDid~~al~~A~~Ni~~ 161 (384)
.+|.=||+|+ ++.-+|. ...|+.|+..|+++++++.|.++++.
T Consensus 7 ~~VaViGaG~--MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 7 GDVLIVGSGL--VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred CeEEEECCcH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHH
Confidence 4677777754 3333333 24689999999999999988887753
No 459
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.95 E-value=1.4e+02 Score=26.44 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=39.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.++...+...+.+.. ..++.++..|..+
T Consensus 16 ~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 75 (278)
T 2bgk_A 16 DKVAIITGGA-GGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISFVHCDVTK 75 (278)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTTC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC----CCceEEEECCCCC
Confidence 4578878865 55787777654 478999999998766544433321 2268889888653
No 460
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=33.94 E-value=46 Score=31.67 Aligned_cols=41 Identities=15% Similarity=0.099 Sum_probs=28.5
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++ ..++ +|+++|.+++.++.|++
T Consensus 192 g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCK-AAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCCHHHHHHHHH
Confidence 45788888754 434444544 3577 89999999988887753
No 461
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.65 E-value=91 Score=25.05 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=35.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
..+++=+|+| -++..++..+ .++.|+++|.|++.++.+++ .+ +.++.+|..
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~~ 59 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG-----VRAVLGNAA 59 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEESCTT
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC-----CCEEECCCC
Confidence 3467777775 5666666544 57899999999998876653 33 566777743
No 462
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=33.56 E-value=45 Score=31.64 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=28.6
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+|. |.+.+.+++. .++ +|+++|.+++.++.|++
T Consensus 191 g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH
Confidence 45788888753 3344445443 477 89999999998888764
No 463
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=33.36 E-value=38 Score=32.13 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=28.0
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~ 156 (384)
..+||=+|+|. |.+++.+++..++++|+++|.+++-++.|+
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 35788888742 223334554443889999999999888875
No 464
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=33.28 E-value=1.2e+02 Score=27.32 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=38.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++.++ .+++|+++|.++...+.+. .+... ..++.++..|..+
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~Dv~d 90 (273)
T 3uf0_A 30 AGRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADG---GGSAEAVVADLAD 90 (273)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTT---TCEEEEEECCTTC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhc---CCcEEEEEecCCC
Confidence 3457888887655 777777654 5889999996654444333 33333 2468888888653
No 465
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=33.27 E-value=1.5e+02 Score=26.95 Aligned_cols=60 Identities=10% Similarity=0.003 Sum_probs=40.6
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHH-HHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVA-LEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~a-l~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++.++ .+++|+.++.+... .+.+.+-++..+ .++.++..|+.+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 108 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSD 108 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 3457888887665 777777655 58999999988653 444444444333 468889988753
No 466
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=33.12 E-value=1.7e+02 Score=26.43 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=40.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+.+|.+++.++...... ..++.++..|+.+
T Consensus 26 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d 84 (277)
T 4dqx_A 26 NQRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVANEI------GSKAFGVRVDVSS 84 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CTTEEEEECCTTC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEecCCC
Confidence 3457888887655 777777654 5899999999988766554432 2358888888653
No 467
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=32.94 E-value=1.2e+02 Score=26.84 Aligned_cols=60 Identities=12% Similarity=-0.062 Sum_probs=40.8
Q ss_pred CCeEEEECCc--ccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTG--ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtG--sG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ +| |+..++..+ .+++|+.++.++...+.+.+-.+..+ ..++.++..|+.+
T Consensus 7 ~k~vlVTGasg~~G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 70 (266)
T 3oig_A 7 GRNIVVMGVANKRS-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTN 70 (266)
T ss_dssp TCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSS
T ss_pred CCEEEEEcCCCCCc-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCC
Confidence 4567777765 44 676666654 58999999998766666655555443 2368889998754
No 468
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=32.92 E-value=1.2e+02 Score=26.70 Aligned_cols=58 Identities=9% Similarity=-0.135 Sum_probs=40.4
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|++ |.|+..++..+ .+++|++++. +++.++...+.+...+ .++.++..|..+
T Consensus 8 k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~ 68 (261)
T 1gee_A 8 KVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTV 68 (261)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTS
T ss_pred CEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEECCCCC
Confidence 467766654 55787777654 4789999999 8877766666665443 368888888653
No 469
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=32.49 E-value=1.7e+02 Score=26.40 Aligned_cols=56 Identities=13% Similarity=-0.117 Sum_probs=39.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++.++ .+++|+.+|.+++.++..... +..++.++..|+.+
T Consensus 5 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dv~~ 62 (281)
T 3zv4_A 5 GEVALITGGASG-LGRALVDRFVAEGARVAVLDKSAERLRELEVA------HGGNAVGVVGDVRS 62 (281)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------TBTTEEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH------cCCcEEEEEcCCCC
Confidence 356787887765 777777654 489999999998877654332 22468888888653
No 470
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=32.38 E-value=73 Score=29.79 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=29.9
Q ss_pred CCeEEEECC--cccHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGt--GsG~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||-+|+ |-|...+.+++ ..+++|+++|.+++.++.+++
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHh
Confidence 458999998 34444444544 357899999999998888764
No 471
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=32.23 E-value=94 Score=27.07 Aligned_cols=58 Identities=17% Similarity=0.054 Sum_probs=39.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++...+.+... .++.++..|..+
T Consensus 6 ~k~vlVtGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 65 (251)
T 1zk4_A 6 GKVAIITGGT-LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSD 65 (251)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTC
T ss_pred CcEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCC
Confidence 3467766754 55787777654 4789999999988776555444221 468889888653
No 472
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=31.21 E-value=97 Score=26.85 Aligned_cols=59 Identities=7% Similarity=-0.021 Sum_probs=40.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHH-CCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKS-NPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~-n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.++..++.....+.. .+ .++.++..|..+
T Consensus 7 ~~~vlVtGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 68 (248)
T 2pnf_A 7 GKVSLVTGST-RGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG---VKAHGVEMNLLS 68 (248)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC---CCEEEEECCTTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC---CceEEEEccCCC
Confidence 3467766654 55787777654 478999999998877766555543 22 258888888653
No 473
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=31.20 E-value=1.8e+02 Score=25.89 Aligned_cols=60 Identities=20% Similarity=0.115 Sum_probs=41.3
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++.++ .+++|+.++. +.+.++...+.++..+ .++.++..|+.+
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 79 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQ 79 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 3457887886655 777777654 5899999876 4666666666665544 368888888753
No 474
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=31.06 E-value=1.5e+02 Score=26.11 Aligned_cols=56 Identities=9% Similarity=0.064 Sum_probs=39.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|+++|.+++.++...+.+. ..+.++..|..+
T Consensus 9 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d 66 (248)
T 3op4_A 9 GKVALVTGASRG-IGKAIAELLAERGAKVIGTATSESGAQAISDYLG------DNGKGMALNVTN 66 (248)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG------GGEEEEECCTTC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceEEEEeCCC
Confidence 456777776655 777777654 58999999999988776555442 246777888653
No 475
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=30.85 E-value=66 Score=30.36 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=29.5
Q ss_pred CeEEEECCcc-cHHHHHHHhhccCCE-EEEEeCcHHHHHHHHHH
Q 016734 117 VKGFDIGTGA-NCIYPLLGASLLGWS-FVGSDMTDVALEWAEKN 158 (384)
Q Consensus 117 ~~vLDIGtGs-G~I~~~La~~~~~~~-v~gvDid~~al~~A~~N 158 (384)
.+||=+|+|. |.+++.+++ ..+++ |+++|.+++-++.|++-
T Consensus 181 ~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAK-AAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCSEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHh
Confidence 4577678754 444444554 45776 99999999999999875
No 476
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=30.42 E-value=53 Score=29.40 Aligned_cols=57 Identities=11% Similarity=-0.062 Sum_probs=33.6
Q ss_pred CeEEEECCcc-cHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 117 VKGFDIGTGA-NCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 117 ~~vLDIGtGs-G~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
.++|=.|.++ |.|+..++..+ .+++|+.++.++...+.+.+-.+..+ .+.++..|+.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~----~~~~~~~D~~ 69 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG----SDIVLQCDVA 69 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEECCTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC----CcEEEEccCC
Confidence 4677777652 56888777654 48999999998722222222222222 2356777764
No 477
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=30.21 E-value=1.7e+02 Score=26.63 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=39.9
Q ss_pred CCeEEEECCccc-HHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGAN-CIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG-~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| -|+..++..+ .+++|+.++.++...+.+.+-.+..+ ++.++..|+.+
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d 92 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG----AFVAGHCDVAD 92 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT----CEEEEECCTTC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CceEEECCCCC
Confidence 456777776632 2666666544 47899999999876666655555443 47888888754
No 478
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.14 E-value=1.1e+02 Score=27.43 Aligned_cols=60 Identities=10% Similarity=-0.014 Sum_probs=41.4
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeC---cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM---TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi---d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
....+|=.|.++| |+..++..+ .+++|+.++. +.+.++.+...+...+ .++.++..|+.+
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 74 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQSDLSN 74 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEECCCCS
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 3457888887766 788887765 4789999865 4556665555555443 468889888753
No 479
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=30.09 E-value=83 Score=29.15 Aligned_cols=59 Identities=12% Similarity=0.029 Sum_probs=40.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc----------HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT----------DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid----------~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++..+ .+++|+.+|.+ .+.++.....+...+ .++.++..|+.+
T Consensus 27 gk~vlVTGas~G-IG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 97 (322)
T 3qlj_A 27 GRVVIVTGAGGG-IGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG---GEAVADGSNVAD 97 (322)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT---CEEEEECCCTTS
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 456777776654 777777654 58999999987 566666666665554 367888888653
No 480
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=30.08 E-value=1.6e+02 Score=26.20 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=41.9
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEE-eCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gv-Did~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++.++ .+++|+.+ +.+.+.++.....+...+ .++.++..|+.+
T Consensus 26 ~k~vlITGas~g-IG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~ 87 (272)
T 4e3z_A 26 TPVVLVTGGSRG-IGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG---GEAVAIPGDVGN 87 (272)
T ss_dssp SCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 346777776555 788877765 57898776 778888877777766553 368888888653
No 481
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=30.07 E-value=2e+02 Score=25.18 Aligned_cols=58 Identities=10% Similarity=0.044 Sum_probs=39.3
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeC-cHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDi-d~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|.++| |+..++..+ .+++|+.++. +++.++.+.+.++..+ .++.++..|..+
T Consensus 5 k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 65 (246)
T 3osu_A 5 KSALVTGASRG-IGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVAD 65 (246)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTTC
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 35666665544 787777654 4889999887 5566666666666554 368888888653
No 482
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=30.05 E-value=1.6e+02 Score=25.36 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=39.9
Q ss_pred eEEEECCcccHHHHHHHhhc--cCC-------EEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 118 KGFDIGTGANCIYPLLGASL--LGW-------SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~--~~~-------~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
++|=.|.+ |.|+..++..+ .++ +|++++.++..++.....+...+ .++.++..|..+
T Consensus 4 ~vlITGas-ggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 69 (244)
T 2bd0_A 4 ILLITGAG-KGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---ALTDTITADISD 69 (244)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT---CEEEEEECCTTS
T ss_pred EEEEECCC-ChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC---CeeeEEEecCCC
Confidence 56666654 55787777654 367 89999999988776666655432 368888888653
No 483
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=29.91 E-value=61 Score=30.42 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=28.3
Q ss_pred CCCeEEEECCc--ccHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 115 DKVKGFDIGTG--ANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 115 ~~~~vLDIGtG--sG~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
...+||-+|++ .|.....+++ ..+++|+++|.+++.++.+++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAK-AMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSTTHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCcEEEEcCCHHHHHHHHH
Confidence 34589999983 3333333333 357899999999888776653
No 484
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=29.88 E-value=1.3e+02 Score=27.06 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=39.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcH-HHHHHHHHHHH-HCCCCCCceEEEEcCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTD-VALEWAEKNVK-SNPHISELIEIRKVDNS 177 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~-~al~~A~~Ni~-~n~~l~~~I~~~~~d~~ 177 (384)
...+|=.|.++| |+..++..+ .+++|+.++.++ +.++.+.+.+. ..+ .++.++..|+.
T Consensus 23 ~k~~lVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~ 84 (288)
T 2x9g_A 23 APAAVVTGAAKR-IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS---NTAVVCQADLT 84 (288)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC---CceEEEEeecC
Confidence 346777776554 777777654 478999999987 66665555554 332 36888888865
No 485
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=29.73 E-value=87 Score=28.46 Aligned_cols=59 Identities=12% Similarity=-0.060 Sum_probs=40.4
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHH-------HHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDV-------ALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~-------al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|+++| |+..++.++ .+++|++++.+++ .++.+.+.+...+ .++.++..|+.+
T Consensus 9 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 76 (285)
T 3sc4_A 9 GKTMFISGGSRG-IGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIRD 76 (285)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTTS
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCCC
Confidence 457888887766 777777654 4789999999876 3444444444433 368888888753
No 486
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=29.59 E-value=87 Score=30.16 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=28.4
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++ ..++ +|+++|.+++-++.|++
T Consensus 214 g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILK-HAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 34677788753 333344444 4577 99999999999988864
No 487
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=29.07 E-value=1.5e+02 Score=26.90 Aligned_cols=60 Identities=10% Similarity=-0.001 Sum_probs=40.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc--HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT--DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid--~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|.++| |+..++..+ .+++|+.++.+ ...++.+.+-++..+ .++.++..|+.+
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d 111 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSD 111 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCC
Confidence 3457888887655 787777654 58899999987 445555555555543 368888888653
No 488
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=28.99 E-value=81 Score=27.51 Aligned_cols=58 Identities=7% Similarity=-0.054 Sum_probs=39.8
Q ss_pred CeEEEECCcccHHHHHHHhhc--cCCEEEEEeCc-HHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT-DVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 117 ~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid-~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
.++|=.|. +|.|+..++..+ .+++|++++.+ +..++.+.+.+...+ .++.++..|..+
T Consensus 8 k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 68 (258)
T 3afn_B 8 KRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAFFAADLAT 68 (258)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT---CEEEEEECCTTS
T ss_pred CEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC---CceEEEECCCCC
Confidence 46776665 456887777654 47899999998 666665555555443 368888888653
No 489
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=28.96 E-value=1e+02 Score=28.15 Aligned_cols=59 Identities=8% Similarity=-0.104 Sum_probs=40.7
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
+.+.+|=-|.++| |+..++..+ .+++|+.+|.+.+..+.+.+-.+.. .++.++..|+.+
T Consensus 6 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~ 66 (258)
T 4gkb_A 6 QDKVVIVTGGASG-IGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQ----PRATYLPVELQD 66 (258)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHC----TTCEEEECCTTC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcC----CCEEEEEeecCC
Confidence 4567888888877 676666654 4899999999877665554443333 257788888653
No 490
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=28.79 E-value=1.4e+02 Score=26.98 Aligned_cols=56 Identities=14% Similarity=0.123 Sum_probs=39.5
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|.++| |+..++..+ .+++|+.+|.+++.++.+.+.+. .++.++..|+.+
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d 85 (272)
T 4dyv_A 28 KKIAIVTGAGSG-VGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVTD 85 (272)
T ss_dssp CCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTTS
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCCC
Confidence 346676676554 787777654 58999999999988776655442 357888888653
No 491
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=28.60 E-value=44 Score=31.90 Aligned_cols=40 Identities=18% Similarity=0.098 Sum_probs=27.8
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCC-EEEEEeCcHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~-~v~gvDid~~al~~A~ 156 (384)
..+||=+|+|. |.+++.+++ ..++ +|+++|.+++-++.|+
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~-~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAK-TAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-HHTCSCEEEECSCTTHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCCHHHHHHHH
Confidence 34677788753 444444554 3476 8999999999888775
No 492
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=28.27 E-value=2.1e+02 Score=24.73 Aligned_cols=56 Identities=16% Similarity=0.114 Sum_probs=38.6
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCce-EEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELI-EIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I-~~~~~d~~~ 178 (384)
..++|=.|++ |.|+..++..+ .+++|++++.+++.++.+.+.+ + .++ .++..|..+
T Consensus 11 ~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~~D~~~ 69 (254)
T 2wsb_A 11 GACAAVTGAG-SGIGLEICRAFAASGARLILIDREAAALDRAAQEL---G---AAVAARIVADVTD 69 (254)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G---GGEEEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c---ccceeEEEEecCC
Confidence 3567877765 45787777654 4789999999988776554444 1 245 788888653
No 493
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=28.14 E-value=1.8e+02 Score=25.79 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=38.8
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEe-CcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvD-id~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...+|=.|++ |.|+..++..+ .+++|+.++ .+...++......... ..++.++..|+.+
T Consensus 25 ~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~ 86 (269)
T 3gk3_A 25 KRVAFVTGGM-GGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA---GRDFKAYAVDVAD 86 (269)
T ss_dssp CCEEEETTTT-SHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT---TCCCEEEECCTTC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCceEEEEecCCC
Confidence 3456766655 44787777665 478999998 6666655555544433 2468899988753
No 494
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=28.14 E-value=53 Score=28.60 Aligned_cols=46 Identities=20% Similarity=0.047 Sum_probs=31.2
Q ss_pred CcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCC
Q 016734 124 TGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (384)
Q Consensus 124 tGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~ 177 (384)
||.|.++..++..+ .+..|+.+|.|++.++...+ ..+ +.++.+|..
T Consensus 6 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~~-----~~~i~gd~~ 53 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KLK-----ATIIHGDGS 53 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HSS-----SEEEESCTT
T ss_pred ECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---HcC-----CeEEEcCCC
Confidence 34577887777654 47899999999987765432 122 567777753
No 495
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=27.80 E-value=1.5e+02 Score=26.13 Aligned_cols=56 Identities=16% Similarity=0.019 Sum_probs=38.3
Q ss_pred CCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 116 ~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
..++|=.|.++| |+..++..+ .+++|++++.+++.++...+.+ + .++.++..|..+
T Consensus 6 ~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~ 63 (253)
T 1hxh_A 6 GKVALVTGGASG-VGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G---ERSMFVRHDVSS 63 (253)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C---TTEEEECCCTTC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CceEEEEccCCC
Confidence 346776676544 787777654 4789999999988776554433 2 357888888653
No 496
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=27.61 E-value=2e+02 Score=25.72 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=40.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
...++|=.|+++| |+..++..+ .+++|+.++.+++.++.+.+.. ..++.++..|+.+
T Consensus 26 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d 84 (266)
T 3grp_A 26 TGRKALVTGATGG-IGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------GKDVFVFSANLSD 84 (266)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTTS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEeecCC
Confidence 3457777776655 787777654 5899999999988776654332 2368888888753
No 497
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=27.55 E-value=1.1e+02 Score=28.93 Aligned_cols=41 Identities=15% Similarity=0.038 Sum_probs=29.5
Q ss_pred CCeEEEECCcc-cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 116 ~~~vLDIGtGs-G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
..+||=+|+|. |.+++.+++ ..+++|+++|.+++.++.|++
T Consensus 190 g~~VlV~G~G~vG~~a~qla~-~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAK-ATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCEEEEEecCchhHHHHHH
Confidence 45788888664 434444443 468899999999998888754
No 498
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=27.48 E-value=50 Score=30.92 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=30.7
Q ss_pred CCCeEEEECCcc--cHHHHHHHhhccCCEEEEEeCcHHHHHHHHH
Q 016734 115 DKVKGFDIGTGA--NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (384)
Q Consensus 115 ~~~~vLDIGtGs--G~I~~~La~~~~~~~v~gvDid~~al~~A~~ 157 (384)
...+||=+|+|+ |.....+++ ..+++|+++|.+++.++.+++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQ-ILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSSTTHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHh
Confidence 345899998874 444444544 457899999999988888865
No 499
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=27.31 E-value=45 Score=34.85 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=28.2
Q ss_pred CCCeEEEECCcccHHHHHHHhhc-------c-----CCEEEEEeC---cHHHHHH
Q 016734 115 DKVKGFDIGTGANCIYPLLGASL-------L-----GWSFVGSDM---TDVALEW 154 (384)
Q Consensus 115 ~~~~vLDIGtGsG~I~~~La~~~-------~-----~~~v~gvDi---d~~al~~ 154 (384)
...+|+|+|.|+|.-.+.+.+.+ | ..+++.+|. +.+-+..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~ 112 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLAS 112 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHH
Confidence 45799999999998777665532 1 157999998 4444443
No 500
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=26.79 E-value=93 Score=26.97 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=37.2
Q ss_pred eEEEECCcccHHHHHHHhhc--cCCEEEEEeCcHHHHHHHHHHHHHCCCCCCceEEEEcCCCC
Q 016734 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178 (384)
Q Consensus 118 ~vLDIGtGsG~I~~~La~~~--~~~~v~gvDid~~al~~A~~Ni~~n~~l~~~I~~~~~d~~~ 178 (384)
++|=.|+++| |+..++..+ .+++|+.++.+++.++.+... +..++.++..|..+
T Consensus 3 ~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~~ 58 (230)
T 3guy_A 3 LIVITGASSG-LGAELAKLYDAEGKATYLTGRSESKLSTVTNC------LSNNVGYRARDLAS 58 (230)
T ss_dssp CEEEESTTSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------CSSCCCEEECCTTC
T ss_pred EEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------HhhccCeEeecCCC
Confidence 3566676655 777777654 578999999999877654432 23467788888653
Done!