Query 016737
Match_columns 383
No_of_seqs 102 out of 112
Neff 3.7
Searched_HMMs 46136
Date Fri Mar 29 02:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06485 DUF1092: Protein of u 100.0 1E-122 2E-127 883.7 30.8 269 101-377 1-270 (270)
2 PF00665 rve: Integrase core d 96.6 0.0098 2.1E-07 48.0 7.7 92 99-192 7-100 (120)
3 COG3607 Predicted lactoylgluta 60.2 5.8 0.00013 35.9 1.9 31 89-127 100-130 (133)
4 PHA02517 putative transposase 41.7 1.2E+02 0.0025 28.7 7.6 85 99-192 111-202 (277)
5 TIGR03749 conj_TIGR03749 integ 32.4 38 0.00081 33.8 2.7 57 275-334 171-230 (257)
6 PF07058 Myosin_HC-like: Myosi 26.6 36 0.00078 35.1 1.5 56 148-204 45-118 (351)
7 PF05282 AAR2: AAR2 protein; 25.1 57 0.0012 32.8 2.7 31 345-375 30-63 (362)
8 PRK14866 hypothetical protein; 22.7 3.7E+02 0.008 29.0 8.1 123 149-293 228-362 (451)
9 cd08494 PBP2_NikA_DppA_OppA_li 21.5 1.5E+02 0.0033 29.5 4.8 49 152-202 305-359 (448)
10 COG0191 Fba Fructose/tagatose 20.9 1.9E+02 0.0041 29.4 5.3 47 139-188 24-79 (286)
No 1
>PF06485 DUF1092: Protein of unknown function (DUF1092); InterPro: IPR009472 This family consists of several hypothetical proteins of unknown function all from photosynthetic organisms including plants and cyanobacteria.
Probab=100.00 E-value=1e-122 Score=883.68 Aligned_cols=269 Identities=50% Similarity=0.875 Sum_probs=263.7
Q ss_pred eecccccCccccCCCceeEEEEEeeCCCceEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCCCeeeeehHHHHHHHHHHh
Q 016737 101 WELDFCSRPILDIRGKKIWELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQMQTIITKAC 180 (383)
Q Consensus 101 WELDFYSRPilD~~GKKlWELLICd~~~~f~y~~~CP~s~VNS~WL~~aL~~ai~~a~~~~P~~IRfFR~QM~nmI~kAc 180 (383)
||||||||||+|++|||+|||||||++++|+|+++||||+|||+||++||++|+++ |+.+|++|||||+||+|||++||
T Consensus 1 WElDFYsRPi~d~~gkk~WELLIcd~~~~f~~~~~cP~~~vNS~wL~~al~~a~~~-~~~~P~~Ir~FR~qm~~mI~~A~ 79 (270)
T PF06485_consen 1 WELDFYSRPILDENGKKLWELLICDSPGSFRYAKFCPNSEVNSIWLRQALEEAIDQ-GGEKPDRIRFFRSQMLNMITKAC 79 (270)
T ss_pred CccccccCcccCCCCCeeEEEEEEcCCCCEEEEEeCCCCccCHHHHHHHHHHHHHh-cCCCCcEEEEEhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred hhCCCccccccchHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCcccCCCeeEEEeechhhhHHhhhcccc
Q 016737 181 KELDIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGDKWAFVQLPFSAVQEEVSSLES 260 (383)
Q Consensus 181 ~eLgI~~~PSRRT~aL~~WL~ER~e~VYp~~pGY~~~~~~p~~~~~~~P~pLPdaL~Ge~WaFvsLpa~~l~e~~~~~~~ 260 (383)
++|||+++||||||||++||+||+++|||+|+||++++++++++++++|+|||||||||+|+||+||+++|+++ .+|
T Consensus 80 ~~lgI~~~pSRRt~aL~~wL~eR~~~vYp~~~gy~~~~~~~~~~~~~~P~pLPdaL~Ge~W~FvsLp~~~l~e~---~e~ 156 (270)
T PF06485_consen 80 EELGIPVEPSRRTYALKQWLEEREEEVYPQEPGYQPGAPPPVALDPPPPQPLPDALRGEKWAFVSLPAGDLREA---FEW 156 (270)
T ss_pred HHCCCceeecccHHHHHHHHHHHHHHhCcCCCCCCCCCCCccccCCCCCCCCChhhCCCceEEEEccHHHHHhh---hcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 489
Q ss_pred ccccCccccccccCCCCCCCCCcceeEEecC-cchhHHHhhcCCceEEEEEecCCCeEEEeecCCCeEEEEEecCCcchh
Q 016737 261 KFVFGASLDLDLLGIEVDDKTLIPGLAVASS-RAKPLAAWMNGLEVCSIETDTARGSLILSVGISTRYIYANYKKNPVTT 339 (383)
Q Consensus 261 pI~fg~l~Pl~~l~~~L~~dt~IPGvvI~S~-RAl~LA~WlsGlEp~~L~~d~~~~~LILEtGl~drWilat~~d~~~~~ 339 (383)
||.||+++||+ +||++|++||||+|||+ |||+||+||+|+|||+|+||.+..+||||||++||||||||+ ++++.
T Consensus 157 ~i~fg~l~Pl~---~~l~~~~~IPGv~I~s~~Ral~LA~Wl~glEp~~L~~~~~~~~LiLEaGl~drWi~a~~~-d~~~~ 232 (270)
T PF06485_consen 157 PIPFGELLPLP---LGLASDTPIPGVVIFSGRRALPLAAWLSGLEPVSLNYDPGEPGLILEAGLDDRWILATLE-DPEAA 232 (270)
T ss_pred CccccccCCCC---CCCCcCCccceEEEecCcchhHHHHHhccCceEEEEEecCCceEEEecCCcceEEEEeCC-CHHHH
Confidence 99999999997 89999999999999996 999999999999999999998866999999999999999999 59999
Q ss_pred HHHHHHHHHHHHcCCcEEEEEecCCCCCceeeEEeecC
Q 016737 340 SEAEAWEAAKKACGGLHFLAIQEELDSEDCVGFWLLLD 377 (383)
Q Consensus 340 ~eA~~fE~aKq~a~GLHFLaVQ~dp~~etfaGFWLL~d 377 (383)
+||++||++|++|+|||||||||||++++|+|||||||
T Consensus 233 ~ea~~fe~~K~~a~GlHFLaVQ~d~~~~t~~GFWLL~~ 270 (270)
T PF06485_consen 233 AEAQAFEQAKQAAQGLHFLAVQPDPSSETFAGFWLLQD 270 (270)
T ss_pred HHHHHHHHHHHHcCCceEEEEecCCCCCceeeEEEecC
Confidence 99999999999999999999999999999999999996
No 2
>PF00665 rve: Integrase core domain; InterPro: IPR001584 Integrase comprises three domains capable of folding independently and whose three-dimensional structures are known. However, the manner in which the N-terminal, catalytic, and C-terminal domains interact in the holoenzyme remains obscure. Numerous studies indicate that the enzyme functions as a multimer, minimally a dimer. The integrase proteins from Human immunodeficiency virus 1 (HIV-1) and Avian sarcoma virus (ASV) have been studied most carefully with respect to the structural basis of catalysis. Although the active site of ASV integrase does not undergo significant conformational changes on binding the required metal cofactor, that of HIV-1 does. This active site-mediated conformational change in HIV-1 reorganises the catalytic core and C-terminal domains and appears to promote an interaction that is favourable for catalysis []. Retroviral integrase is synthesised as part of the POL polyprotein that contains; an aspartyl protease, a reverse transcriptase, RNase H and integrase. POL polyprotein undergoes specific enzymatic cleavage to yield the mature proteins. The presence of retrovirus integrase-related gene sequences in eukaryotes is known. Bacterial transposases involved in the transposition of the insertion sequence also belong to this group. HIV integrase catalyses the incorporation of virally derived DNA into the human genome. This unique step in the virus life cycle provides a variety of points for intervention and hence is an attractive target for the development of new therapeutics for the treatment of AIDS []. Substrate recognition by the retroviral integrase enzyme is critical for retroviral integration. To catalyse this recombination event, integrase must recognise and act on two types of substrates, viral DNA and host DNA, yet the necessary interactions exhibit markedly different degrees of specificity [].; GO: 0015074 DNA integration; PDB: 3AO3_A 3OVN_A 3AO5_A 3AO4_A 3AO1_A 1C6V_D 3HPG_A 3HPH_A 3OYD_A 3OYF_B ....
Probab=96.65 E-value=0.0098 Score=48.00 Aligned_cols=92 Identities=24% Similarity=0.338 Sum_probs=71.3
Q ss_pred ceeecccccCccccCCCceeEEEEEeeCCCceEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCCCeeeeehHHHHH--HH
Q 016737 99 TEWELDFCSRPILDIRGKKIWELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQMQT--II 176 (383)
Q Consensus 99 ~iWELDFYSRPilD~~GKKlWELLICd~~~~f~y~~~CP~s~VNS~WL~~aL~~ai~~a~~~~P~~IRfFR~QM~n--mI 176 (383)
..|++|++.-++.+ .|++.|=++++|.-+.+.+...+++. -++..+...|..++...|+..|..|+.=+..-++ .+
T Consensus 7 ~~~~~D~~~~~~~~-~~~~~~~~~~iD~~S~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~p~~i~tD~g~~f~~~~~ 84 (120)
T PF00665_consen 7 ERWQIDFTPMPIPD-KGGRVYLLVFIDDYSRFIYAFPVSSK-ETAEAALRALKRAIEKRGGRPPRVIRTDNGSEFTSHAF 84 (120)
T ss_dssp TEEEEEEEEETGGC-TT-CEEEEEEEETTTTEEEEEEESSS-SHHHHHHHHHHHHHHHHS-SE-SEEEEESCHHHHSHHH
T ss_pred CEEEEeeEEEecCC-CCccEEEEEEEECCCCcEEEEEeecc-cccccccccccccccccccccceecccccccccccchh
Confidence 48999999444444 44489999999998899999999988 6777889999999997653339999887666555 88
Q ss_pred HHHhhhCCCccccccc
Q 016737 177 TKACKELDIKPIPSKR 192 (383)
Q Consensus 177 ~kAc~eLgI~~~PSRR 192 (383)
+..|+++||....++.
T Consensus 85 ~~~~~~~~i~~~~~~~ 100 (120)
T PF00665_consen 85 EAWCKHLGIKHVFTPP 100 (120)
T ss_dssp HHHHHHHT-EEEESST
T ss_pred hhHHHHcCceEeeCCC
Confidence 9999999999988774
No 3
>COG3607 Predicted lactoylglutathione lyase [General function prediction only]
Probab=60.18 E-value=5.8 Score=35.94 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=25.0
Q ss_pred ccCCCCCCccceeecccccCccccCCCceeEEEEEeeCC
Q 016737 89 LDEETDPESITEWELDFCSRPILDIRGKKIWELVVCDGS 127 (383)
Q Consensus 89 ~~p~~~~~~~~iWELDFYSRPilD~~GKKlWELLICd~~ 127 (383)
.+|..|-.. +|+|-..|.+|. +||++.||..
T Consensus 100 ~~~~~d~gf-------MYg~~fqDpDGh-~wE~l~m~~~ 130 (133)
T COG3607 100 ANEPQDEGF-------MYGRSFQDPDGH-VWEFLWMDPE 130 (133)
T ss_pred CCCcccccc-------ccceeeeCCCCC-eEEEEEeCHH
Confidence 455555553 799999999998 9999999963
No 4
>PHA02517 putative transposase OrfB; Reviewed
Probab=41.75 E-value=1.2e+02 Score=28.74 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=53.8
Q ss_pred ceeecccccCccccCCCceeEEEEEeeCCCceEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCCCe--ee-----eehHH
Q 016737 99 TEWELDFCSRPILDIRGKKIWELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEK--IR-----FFRSQ 171 (383)
Q Consensus 99 ~iWELDFYSRPilD~~GKKlWELLICd~~~~f~y~~~CP~s~VNS~WL~~aL~~ai~~a~~~~P~~--IR-----fFR~Q 171 (383)
..|+.||-.=++ .+.+.+=..|-|.-+.+... +.-....|+.+..++|+.|+...| .|.. |+ -|.+
T Consensus 111 ~~w~~D~t~~~~---~~g~~yl~~iiD~~sr~i~~-~~~~~~~~~~~~~~~l~~a~~~~~--~~~~~i~~sD~G~~y~s- 183 (277)
T PHA02517 111 QLWVADFTYVST---WQGWVYVAFIIDVFARRIVG-WRVSSSMDTDFVLDALEQALWARG--RPGGLIHHSDKGSQYVS- 183 (277)
T ss_pred CeEEeceeEEEe---CCCCEEEEEecccCCCeeee-cccCCCCChHHHHHHHHHHHHhcC--CCcCcEeecccccccch-
Confidence 689999875332 23456655555653323222 222445788899999999998754 3542 21 2333
Q ss_pred HHHHHHHHhhhCCCccccccc
Q 016737 172 MQTIITKACKELDIKPIPSKR 192 (383)
Q Consensus 172 M~nmI~kAc~eLgI~~~PSRR 192 (383)
.-++.+|+++||....++.
T Consensus 184 --~~~~~~~~~~gi~~~~~~~ 202 (277)
T PHA02517 184 --LAYTQRLKEAGIRASTGSR 202 (277)
T ss_pred --HHHHHHHHHcCcccccCCC
Confidence 3577899999999887765
No 5
>TIGR03749 conj_TIGR03749 integrating conjugative element protein, PFL_4704 family. Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Probab=32.35 E-value=38 Score=33.84 Aligned_cols=57 Identities=28% Similarity=0.503 Sum_probs=42.1
Q ss_pred CCCCCCCCcceeEEecCcchhHHHhhcCC-ceEEEEEec-CCCeEEEee-cCCCeEEEEEecC
Q 016737 275 IEVDDKTLIPGLAVASSRAKPLAAWMNGL-EVCSIETDT-ARGSLILSV-GISTRYIYANYKK 334 (383)
Q Consensus 275 ~~L~~dt~IPGvvI~S~RAl~LA~WlsGl-Ep~~L~~d~-~~~~LILEt-Gl~drWilat~~d 334 (383)
....-+++.||.-| +|.+||+|=.|- =+..|++.. ....+.|+- -|.++|+-|||.-
T Consensus 171 ~~~~l~tL~p~~~v---~A~pL~aW~~g~~~VTAv~L~N~s~~~v~LDpr~L~G~f~aATfQH 230 (257)
T TIGR03749 171 LPLALTTLLPGAPV---EAVPLAAWRLGDYYVTAVRLRNRSNRPVTLDPRELQGRFVAATFQH 230 (257)
T ss_pred CCCccceeccCCce---eEEEEeeEEeCCEEEEEEEEEeCCCCceecChHHhcceEEEEEecc
Confidence 34445677888776 799999996554 455677663 477888875 4789999999983
No 6
>PF07058 Myosin_HC-like: Myosin II heavy chain-like; InterPro: IPR009768 This family represents a conserved region within a number of myosin II heavy chain-like proteins that seem to be specific to Arabidopsis thaliana.
Probab=26.58 E-value=36 Score=35.08 Aligned_cols=56 Identities=18% Similarity=0.274 Sum_probs=35.9
Q ss_pred HHHHHHHhhcCCCCCCeeeeehHHHHHHHHHH----hhhCCCcccccc--------------chHHHHHHHHHHH
Q 016737 148 EAIVAICDDLGVPIPEKIRFFRSQMQTIITKA----CKELDIKPIPSK--------------RCLSLLLWLEERY 204 (383)
Q Consensus 148 ~aL~~ai~~a~~~~P~~IRfFR~QM~nmI~kA----c~eLgI~~~PSR--------------RT~aL~~WL~ER~ 204 (383)
..|++||-. ||..-..+|+|++|.+-|-..- .+=...+|...| +..-.+|||+||.
T Consensus 45 ~ELEEaiLa-gGaaaNavrdYqrq~~elneEkrtLeRELARaKV~aNRVA~vvANEWKD~nDkvMPVKqWLEERR 118 (351)
T PF07058_consen 45 RELEEAILA-GGAAANAVRDYQRQVQELNEEKRTLERELARAKVSANRVATVVANEWKDENDKVMPVKQWLEERR 118 (351)
T ss_pred HHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCccccHHHHHHHHH
Confidence 456777776 6678889999999998875321 111123333333 3445789999883
No 7
>PF05282 AAR2: AAR2 protein; InterPro: IPR007946 This family consists of several eukaryotic AAR2-like proteins. The Saccharomyces cerevisiae protein AAR2 is involved in splicing pre-mRNA of the a1 cistron and other genes that are important for cell growth [].; PDB: 3SBT_B 3SBS_A.
Probab=25.06 E-value=57 Score=32.85 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=19.9
Q ss_pred HHHHHHHcCCcEEEEEe---cCCCCCceeeEEee
Q 016737 345 WEAAKKACGGLHFLAIQ---EELDSEDCVGFWLL 375 (383)
Q Consensus 345 fE~aKq~a~GLHFLaVQ---~dp~~etfaGFWLL 375 (383)
|.--|.--.|+|||-+| ...+...-.|||.-
T Consensus 30 F~GIK~IPpG~Hfi~~s~~~~~~~~~~R~G~f~~ 63 (362)
T PF05282_consen 30 FKGIKMIPPGVHFIHYSSSSKNGESSPRYGFFFN 63 (362)
T ss_dssp --EEEEE-TT-EEEEEE---ETTECCEEEEEEE-
T ss_pred ceEEecCCCCceEEEEecccCCCCcCceEEEEEE
Confidence 55555666799999999 55555667899985
No 8
>PRK14866 hypothetical protein; Provisional
Probab=22.68 E-value=3.7e+02 Score=28.98 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=74.8
Q ss_pred HHHHHHhhcCCCCCCeeeeeh----HHHHHHHHHHhhhCCCccccc---cc----hHHHHHHHHHHHhhhccCCCCCCCC
Q 016737 149 AIVAICDDLGVPIPEKIRFFR----SQMQTIITKACKELDIKPIPS---KR----CLSLLLWLEERYETVYTRHPGFQKG 217 (383)
Q Consensus 149 aL~~ai~~a~~~~P~~IRfFR----~QM~nmI~kAc~eLgI~~~PS---RR----T~aL~~WL~ER~e~VYp~~pGY~~~ 217 (383)
.|+.++++ ..++.+=+.| +.-+++|...++++||+++-. |+ .+.+..-|+++..++=
T Consensus 228 ~i~~a~~~---~~~~~a~iD~Ks~k~~~r~~i~~~l~~lgl~vi~e~~lr~~~~~~~~~~~~l~~~~~~~~--------- 295 (451)
T PRK14866 228 VLRAAFEA---SGADAAYIDRKAMSSGDRPRLEALLEELGLRVLSETWLRETGGVPLSLVRALEDLAGTID--------- 295 (451)
T ss_pred HHHHHHHh---cCCCEEEEecCCCCHHHHHHHHHHHHHCCCEEEEeehhcccCCCCHHHHHHHHHHhhccC---------
Confidence 56666666 3478888876 455889999999999999766 33 3466666666654322
Q ss_pred CCCCCCCCCCCCCCCCcccCCCeeEEEeechhhhHHhhhcccccc-ccCccccccccCCCCCCCCCcceeEEecCcc
Q 016737 218 SKPLLALDNPFPMELPDNLFGDKWAFVQLPFSAVQEEVSSLESKF-VFGASLDLDLLGIEVDDKTLIPGLAVASSRA 293 (383)
Q Consensus 218 ~~~p~~~~~~~P~pLPdaL~Ge~WaFvsLpa~~l~e~~~~~~~pI-~fg~l~Pl~~l~~~L~~dt~IPGvvI~S~RA 293 (383)
+.-..-.|+.+....+.-|.||.+-|.++.+...-.+ .--+-.|+.. ..=...+..+|.+.|.+..
T Consensus 296 --------~g~r~~~~~~~~~~~~~~~~~~~~Ll~~a~~~d~~~~~~~~~~~~va~--~t~~~g~~~~~~~~~~~~~ 362 (451)
T PRK14866 296 --------PGLRFGEPARLGDGDPVVVDLPGELLDEAQGVDREAVRAALDEHPVAF--LTTGGGTRLGGFIAFEAAD 362 (451)
T ss_pred --------CCCccccccccCCCCcEEEeCCHHHHHHHhhcCHHHHHHHHhhCceEE--EecCCCeEecceEEecCcc
Confidence 2223334555556667777777776666533221111 1111234432 3335568899999998644
No 9
>cd08494 PBP2_NikA_DppA_OppA_like_6 The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most si
Probab=21.46 E-value=1.5e+02 Score=29.47 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=33.5
Q ss_pred HHHhhcCCCCCCeeee------ehHHHHHHHHHHhhhCCCccccccchHHHHHHHHH
Q 016737 152 AICDDLGVPIPEKIRF------FRSQMQTIITKACKELDIKPIPSKRCLSLLLWLEE 202 (383)
Q Consensus 152 ~ai~~a~~~~P~~IRf------FR~QM~nmI~kAc~eLgI~~~PSRRT~aL~~WL~E 202 (383)
+.++++|+..+..|++ ++.+|-.+|+..++++||++.---... ..|+..
T Consensus 305 ~lL~~aG~~~g~~l~l~~~~~~~~~~~a~~i~~~l~~~GI~v~i~~~~~--~~~~~~ 359 (448)
T cd08494 305 QLLAEAGAAYGLTLTLTLPPLPYARRIGEIIASQLAEVGITVKIEVVEP--ATWLQR 359 (448)
T ss_pred HHHHHcCCCCCeEEEEEecCCcchhHHHHHHHHHHHhcCcEEEEEEeeH--HHHHHH
Confidence 4566767655445655 578899999999999999987533333 345543
No 10
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=20.88 E-value=1.9e+02 Score=29.39 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCeeeeehH---------HHHHHHHHHhhhCCCccc
Q 016737 139 NVINSITLKEAIVAICDDLGVPIPEKIRFFRS---------QMQTIITKACKELDIKPI 188 (383)
Q Consensus 139 s~VNS~WL~~aL~~ai~~a~~~~P~~IRfFR~---------QM~nmI~kAc~eLgI~~~ 188 (383)
|..|+.|++..|+.|-+. .+|-.|++=+. ....||...+++.+||+.
T Consensus 24 N~~nlE~~~AileaA~e~---~sPvIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~ 79 (286)
T COG0191 24 NINNLETLQAILEAAEEE---KSPVIIQFSEGAAKYAGGADSLAHMVKALAEKYGVPVA 79 (286)
T ss_pred eecCHHHHHHHHHHHHHh---CCCEEEEecccHHHHhchHHHHHHHHHHHHHHCCCCEE
Confidence 668999999888877766 67999987543 345677788888888765
Done!