Query 016739
Match_columns 383
No_of_seqs 186 out of 1735
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 02:22:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016739.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016739hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2058 Ypt/Rab GTPase activat 100.0 2.6E-44 5.7E-49 348.4 22.0 253 44-361 124-386 (436)
2 KOG4567 GTPase-activating prot 100.0 3.4E-43 7.3E-48 319.2 23.2 285 45-377 11-363 (370)
3 KOG1092 Ypt/Rab-specific GTPas 100.0 6E-41 1.3E-45 315.2 16.1 273 59-380 178-479 (484)
4 smart00164 TBC Domain in Tre-2 100.0 1.3E-39 2.9E-44 292.9 17.8 195 66-277 1-198 (199)
5 KOG2224 Uncharacterized conser 100.0 3.3E-39 7.2E-44 303.3 17.2 315 22-379 384-734 (781)
6 KOG2223 Uncharacterized conser 100.0 5.3E-38 1.2E-42 295.4 18.3 259 59-375 291-556 (586)
7 COG5210 GTPase-activating prot 100.0 4.8E-35 1E-39 297.1 22.6 241 43-343 183-429 (496)
8 PF00566 RabGAP-TBC: Rab-GTPas 100.0 8.5E-35 1.8E-39 263.9 21.3 169 127-341 46-214 (214)
9 KOG1093 Predicted protein kina 100.0 3.2E-33 6.9E-38 271.4 18.5 248 61-379 347-595 (725)
10 KOG2197 Ypt/Rab-specific GTPas 100.0 1.1E-32 2.3E-37 275.3 16.5 306 31-381 38-448 (488)
11 KOG2222 Uncharacterized conser 100.0 3.8E-31 8.3E-36 251.5 16.4 246 61-372 161-416 (848)
12 KOG1091 Ypt/Rab-specific GTPas 100.0 1.1E-28 2.4E-33 239.8 19.5 262 72-379 27-367 (625)
13 KOG4347 GTPase-activating prot 100.0 2.5E-28 5.4E-33 241.3 15.5 249 44-358 174-425 (671)
14 KOG2595 Predicted GTPase activ 100.0 1.1E-27 2.3E-32 220.5 17.2 238 70-378 62-304 (395)
15 KOG4436 Predicted GTPase activ 100.0 7E-27 1.5E-31 234.4 22.7 254 45-361 551-810 (948)
16 KOG1102 Rab6 GTPase activator 99.9 5E-25 1.1E-29 216.4 11.3 261 36-364 99-375 (397)
17 KOG2221 PDZ-domain interacting 99.8 5.5E-22 1.2E-26 172.6 5.0 215 15-252 48-267 (267)
18 KOG3636 Uncharacterized conser 99.6 5.7E-15 1.2E-19 140.8 15.1 200 129-378 68-275 (669)
19 KOG4436 Predicted GTPase activ 99.6 4.4E-14 9.6E-19 143.0 14.1 201 60-276 175-385 (948)
20 KOG1648 Uncharacterized conser 99.3 6.8E-14 1.5E-18 134.9 -2.8 274 34-370 524-798 (813)
21 KOG2801 Probable Rab-GAPs [Int 98.9 6.6E-08 1.4E-12 88.7 15.9 252 61-375 34-294 (559)
22 PF14961 BROMI: Broad-minded p 97.5 0.0041 9E-08 67.6 16.6 181 154-381 1086-1284(1296)
23 KOG2224 Uncharacterized conser 87.4 0.2 4.3E-06 49.0 0.4 33 168-200 566-598 (781)
24 PF08109 Antimicrobial14: Lact 34.5 27 0.00059 20.3 1.3 15 168-182 3-17 (31)
25 KOG2197 Ypt/Rab-specific GTPas 30.9 30 0.00065 35.5 1.9 56 324-379 431-486 (488)
26 PF10815 ComZ: ComZ; InterPro 28.3 90 0.0019 21.5 3.2 40 221-260 5-44 (56)
27 PF13041 PPR_2: PPR repeat fam 23.8 1.1E+02 0.0025 19.9 3.2 26 232-257 24-49 (50)
28 PRK10878 hypothetical protein; 21.5 1.2E+02 0.0025 22.4 3.1 29 216-244 21-49 (72)
No 1
>KOG2058 consensus Ypt/Rab GTPase activating protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.6e-44 Score=348.36 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=210.7
Q ss_pred HHHHHhhccC-------CCCCHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCcc
Q 016739 44 RRWHAAFSED-------GHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAI 116 (383)
Q Consensus 44 ~~W~~~l~~~-------~~~~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (383)
.+|.-.+.++ ........+++++|+|||+++|+.||..+.|........... ..+...+....
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~VW~~~~g~~~~~~~~~~y-------q~ll~~~~~~~--- 193 (436)
T KOG2058|consen 124 LRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEVWWVLSGARRQLNYPGYY-------QELLRKGDEKK--- 193 (436)
T ss_pred HHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHHHHHHhcchhhccCchhH-------HHHHhcCCCcc---
Confidence 4677777663 233456669999999999999999999999943322211111 11111111000
Q ss_pred chHHHHHHhhhHhHHhhhhccCCCCC-cCCCChhh--HHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHH
Q 016739 117 SDKKVLQWMLGLHQIGLDVVRTDRSL-VFYESETN--QAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFW 193 (383)
Q Consensus 117 ~~~~~~~~~~~~~qI~~Dv~RT~~~~-~~f~~~~~--~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~ 193 (383)
..+.+||+.|+.||||++ +.|..+.. +++|+|||.||+++||.||||||||.+||++|+++++|++|||
T Consensus 194 --------~~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW 265 (436)
T KOG2058|consen 194 --------SPVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFW 265 (436)
T ss_pred --------chHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHH
Confidence 026689999999999999 78877644 8999999999999999999999999999999999988999999
Q ss_pred HHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHh
Q 016739 194 CFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMW 273 (383)
Q Consensus 194 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l 273 (383)
||+.+++++.|.|+ ..++.|.+.++.+|+.+++..+|+|+.||..++++..+++++||+|+|+..+|.+.++||||++|
T Consensus 266 ~Lv~iie~~lp~Yy-t~nL~g~qvDQ~VL~~llre~lPkl~~~l~~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f 344 (436)
T KOG2058|consen 266 MLVALIENYLPRYY-TPNLIGSQVDQKVLRELLREKLPKLSLHLEGNGVDASLETLPWFLTLFVDILPSETVLRIWDCLF 344 (436)
T ss_pred HHHHHHHHhchhhc-CchhhhhhccHHHHHHHHHHHCHHHHHhhhhcCCCeeeeehhhhHHHhcccccHHHHHHHHHHHH
Confidence 99999999998855 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHH
Q 016739 274 AMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKI 353 (383)
Q Consensus 274 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~ 353 (383)
.+|.+ +++-+++|++..++++|+. +.+..+++++
T Consensus 345 ~eGsk---------------------------------------------vlfr~Alai~k~~ee~il~-~~~~~~i~~~ 378 (436)
T KOG2058|consen 345 YEGSK---------------------------------------------VLFRVALAILKKHEEEILK-EDSSKEILRV 378 (436)
T ss_pred hcccH---------------------------------------------HHHHHHHHHHHHhHHHHhc-CCCHHHHHHH
Confidence 98865 3444889999999999998 5699999999
Q ss_pred HhcccCCC
Q 016739 354 LADITGNL 361 (383)
Q Consensus 354 ~~~l~~~~ 361 (383)
+..+...+
T Consensus 379 ~~~~~~~~ 386 (436)
T KOG2058|consen 379 LPDLTKRS 386 (436)
T ss_pred HHHHHHHh
Confidence 98776443
No 2
>KOG4567 consensus GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=3.4e-43 Score=319.21 Aligned_cols=285 Identities=26% Similarity=0.440 Sum_probs=228.5
Q ss_pred HHHHhhccCC-CCCHHHHHHHHHhCCCC--ccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhh--------cC----
Q 016739 45 RWHAAFSEDG-HLDIAKVLRRIQRGGIH--PSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLD--------QG---- 109 (383)
Q Consensus 45 ~W~~~l~~~~-~~~~~~~lk~l~~~GIP--~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~--------~~---- 109 (383)
..++.++... .++..+ ++.++..|+| ..+|+.+|+++||++|.+...+.. .+.+++..+.. .+
T Consensus 11 ~~edvl~~~~~~id~ke-lr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w~s-~La~~R~~Y~q~i~e~v~epg~~~~ 88 (370)
T KOG4567|consen 11 SIEDVLNPADDTIDLKE-LRKLCFYGVPDDASLRPLVWKLLLGYLPPERSKWTS-FLAKKRSLYKQFIEEIVDEPGKKDN 88 (370)
T ss_pred hHHHhhccccchhhHHH-HHHHhhcCCCCccchhHhHHHHHHhhcChhhhhhHH-HHHHHHHHHHHHHHHhccCcccccc
Confidence 3445555432 255555 7778888999 689999999999999887554432 22333322110 00
Q ss_pred ------------CCCC--CccchHHHHHHhhhHhHHhhhhccCCCCCcCCCChh--------------------------
Q 016739 110 ------------WHVD--GAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESET-------------------------- 149 (383)
Q Consensus 110 ------------~~~~--~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~-------------------------- 149 (383)
.+.. .........+..+.+.||++||.||.|+..+|+...
T Consensus 89 ~~~v~~~D~~~dhPls~~~~sdwn~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~~i~~~q~~~~n~~g 168 (370)
T KOG4567|consen 89 SKKVDSNDTDEDHPLSLGPTSDWNTFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRRRINASQEAGRNRLG 168 (370)
T ss_pred ccccccCcccccCCCCCCchhhHHHHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHhhhhhhhHhhhcccc
Confidence 0000 011233344567789999999999999999887521
Q ss_pred -hHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcC----------CHHHHHHHHHHHHHhhhhcccCC--CChHhHH
Q 016739 150 -NQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLE----------NEADAFWCFEHTMRRLRENFRTN--TGMIGVQ 216 (383)
Q Consensus 150 -~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~----------~E~~aF~~f~~l~~~~~~~~~~~--~~~~~~~ 216 (383)
......|||..||..||.||||||||.|+||+++|+. .|+|||.||+.||..++++|..+ ++..|+.
T Consensus 169 l~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseirDnf~k~LDdS~~GI~ 248 (370)
T KOG4567|consen 169 LTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEIRDNFIKTLDDSVGGIH 248 (370)
T ss_pred hhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHHHHHHHHhccccccchH
Confidence 1234578999999999999999999999999999984 38999999999999999998753 4456888
Q ss_pred HHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcc
Q 016739 217 SQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQ 296 (383)
Q Consensus 217 ~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~ 296 (383)
..+..+..+|+.+|-+||.||+..++.|..|+++|+++|++.+||+++|+||||.+++....
T Consensus 249 ~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~r------------------ 310 (370)
T KOG4567|consen 249 FLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQR------------------ 310 (370)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhh------------------
Confidence 88999999999999999999999999999999999999999999999999999999975422
Q ss_pred cchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHH
Q 016739 297 VNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKK 376 (383)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~ 376 (383)
.+|++++|+|+|...|+.||+. |+...++.+++-+ ..|+.++++.|..|..+
T Consensus 311 -------------------------fd~Ll~iCcsmlil~Re~il~~--DF~~nmkLLQ~yp-~tdi~~~l~~A~~Lr~~ 362 (370)
T KOG4567|consen 311 -------------------------FDFLLYICCSMLILVRERILEG--DFTVNMKLLQNYP-TTDISKMLAVADSLRDK 362 (370)
T ss_pred -------------------------hHHHHHHHHHHHHHHHHHHHhc--chHHHHHHHhcCC-CCCHHHHHHHHHHHHhc
Confidence 4589999999999999999986 9999999999999 89999999999999854
Q ss_pred H
Q 016739 377 Y 377 (383)
Q Consensus 377 y 377 (383)
=
T Consensus 363 k 363 (370)
T KOG4567|consen 363 K 363 (370)
T ss_pred c
Confidence 3
No 3
>KOG1092 consensus Ypt/Rab-specific GTPase-activating protein GYP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6e-41 Score=315.23 Aligned_cols=273 Identities=23% Similarity=0.463 Sum_probs=230.1
Q ss_pred HHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccC
Q 016739 59 AKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRT 138 (383)
Q Consensus 59 ~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT 138 (383)
.+++|.++|+|||..+|+.+|+.++|+.|.+....+- .+..+++++.+..........+ ........+||..|+.|+
T Consensus 178 ~~~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~-~l~~Kr~eY~~~v~~~~~~~~~--~~~~~d~~rQI~id~prm 254 (484)
T KOG1092|consen 178 LEKLRKLCWNGVPSKMRPIVWKLLSGYLPPNSDRREG-TLQRKRKEYVDSVVQYFDSLTN--GDEDQDTWRQIPIDIPRM 254 (484)
T ss_pred HHHHHHHccCCCCccccCccceeeecccCcchhhhhh-hHHHHHHHHHHHHHHHhccCCC--ccccCccccccccCCCCC
Confidence 4569999999999999999999999999887544322 2333333333211111110000 011123669999999999
Q ss_pred CCCCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcC-------------------------CHHHHHH
Q 016739 139 DRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLE-------------------------NEADAFW 193 (383)
Q Consensus 139 ~~~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~-------------------------~E~~aF~ 193 (383)
.|..++|+.+-.++.+.|||..++.++|..||+||.++++.|++.++. -|+||||
T Consensus 255 ~p~~~l~q~~~vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyW 334 (484)
T KOG1092|consen 255 NPHIPLFQQKIVQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYW 334 (484)
T ss_pred CccccchhhHHHHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHH
Confidence 999999999999999999999999999999999999999999998871 2899999
Q ss_pred HHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHh
Q 016739 194 CFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMW 273 (383)
Q Consensus 194 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l 273 (383)
|+.+|++.+.++|.+.+. |++.....++.|++..|+.|++||+++|++-..|++||+-+||.|+||+..++|+||.++
T Consensus 335 ClskLLD~IQDNYtfaQp--GIq~kV~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~ 412 (484)
T KOG1092|consen 335 CLSKLLDGIQDNYTFAQP--GIQRKVKNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYL 412 (484)
T ss_pred HHHHHHHHhhhhhhhcCh--hHHHHHHHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Confidence 999999999999988765 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHH
Q 016739 274 AMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKI 353 (383)
Q Consensus 274 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~ 353 (383)
++++. .+.|++|+|+|.|..-+++|++. |+.+++.+
T Consensus 413 aE~dg------------------------------------------f~~FhvYvcAAFL~kW~~eL~e~--DFQ~~ilf 448 (484)
T KOG1092|consen 413 AEPDG------------------------------------------FNEFHVYVCAAFLLKWSSELMEN--DFQELILF 448 (484)
T ss_pred cCccc------------------------------------------hHHHHHHHHHHHHHHHHHHHHHh--HHHHHHHH
Confidence 98653 35689999999999999999964 99999999
Q ss_pred HhcccCCC----CHHHHHHHHHHHHHHHHhh
Q 016739 354 LADITGNL----DAKKACNEALKIQKKYLSK 380 (383)
Q Consensus 354 ~~~l~~~~----d~~~~l~~a~~l~~~y~~~ 380 (383)
|+++++.- |++.+++.|..+..-|-..
T Consensus 449 LQnlPT~~W~d~eIellLseA~~~k~~f~da 479 (484)
T KOG1092|consen 449 LQNLPTHNWSDREIELLLSEAFRLKSVFSDA 479 (484)
T ss_pred HhcCCCCCccHHHHHHHHHHHHHHHHHHccc
Confidence 99999655 8999999999888877654
No 4
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=1.3e-39 Score=292.88 Aligned_cols=195 Identities=32% Similarity=0.597 Sum_probs=164.9
Q ss_pred HhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccCCCCCcCC
Q 016739 66 QRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFY 145 (383)
Q Consensus 66 ~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f 145 (383)
+++|||+.+|+.||+.++|+.+...+.. ...+..+.+...... ....++|++||.||+|+++.|
T Consensus 1 ~~~Gip~~~R~~vW~~ll~~~~~~~~~~-----~~~Y~~l~~~~~~~~-----------~~~~~~I~~Dv~Rt~~~~~~f 64 (199)
T smart00164 1 VRKGVPPSLRGVVWKLLLNAQPMDTSAD-----KDLYSRLLKETAPKD-----------KSIVHQIEKDLRRTFPEHSFF 64 (199)
T ss_pred CCCCCCHHHHHHHHHHHhCCchhhhccc-----chHHHHHHHhhcCCC-----------hhhHHHHhcccCCCCCCchhh
Confidence 3689999999999999999877653210 111111111111100 013589999999999999999
Q ss_pred CCh--hhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHHHHHH
Q 016739 146 ESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLS 223 (383)
Q Consensus 146 ~~~--~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (383)
+.. ..++.|.|||.+|+.++|++||||||++||+++++++.+|++|||||.++|++..+.++ .+++.++...+..++
T Consensus 65 ~~~~~~~~~~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 143 (199)
T smart00164 65 QDKEGPGQESLRRVLKAYALYNPEVGYCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFY-LPDMSGLQLDLLQLD 143 (199)
T ss_pred cCCCcccHHHHHHHHHHHHHHCCCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccC-CCChHHHHHHHHHHH
Confidence 864 58999999999999999999999999999999999998899999999999999877764 667778999999999
Q ss_pred HHHHhHCHHHHHHHHh-CCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccC
Q 016739 224 QIIRTIDPKLHQHLED-LDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEY 277 (383)
Q Consensus 224 ~lL~~~~P~L~~hL~~-~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~ 277 (383)
.+++.++|+||+||++ .|+++..|+.+||+++|++++|++.++||||.++++|.
T Consensus 144 ~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 144 RLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 9999999999999996 99999999999999999999999999999999999874
No 5
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.3e-39 Score=303.29 Aligned_cols=315 Identities=24% Similarity=0.506 Sum_probs=257.4
Q ss_pred CCccCCCCccccccccCC--CCcHHHHHH-hhccCCCCCHH-HHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHH
Q 016739 22 PECQADVPKVRFKARAGK--TLSARRWHA-AFSEDGHLDIA-KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQ 97 (383)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~--~l~~~~W~~-~l~~~~~~~~~-~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~ 97 (383)
..|++++++++..+.++. +++-..|-. .+++.|.+..+ ++.|.++.+||..++|+.||++||.+|...+|.++|..
T Consensus 384 ~i~rpel~~se~hpde~~~kki~~n~~~~t~lne~gqiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~a 463 (781)
T KOG2224|consen 384 MICRPELKKSEMHPDEGDVKKIGTNAFLGTHLNEKGQIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAA 463 (781)
T ss_pred eeecCCCCccccCCccchhhhhhHHHHHHhhhhhcccchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHH
Confidence 456678888888777655 566667776 67788888554 55667888999999999999999999999999999999
Q ss_pred HHHHHHHHhhc--CCCCCCccchHHHHHHhhhHhHHhhhhccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCCcccC
Q 016739 98 IRQQRRDSLDQ--GWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQG 173 (383)
Q Consensus 98 l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~y~~~~p~igY~QG 173 (383)
+...++.-++. .....+..+.....-|+.+.-.++|||.||.+++++|..+ ++.+.++|||..|+.|||.+||.||
T Consensus 464 l~~~krkey~eiqqkrlysmspeeh~~fwknvq~tvdkdvvrtdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqg 543 (781)
T KOG2224|consen 464 LMDIKRKEYEEIQQKRLYSMSPEEHIAFWKNVQFTVDKDVVRTDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQG 543 (781)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHhheEEEEecceeeccCCCCcccCCCCCcHHHHHHHHHhheeeccccccccc
Confidence 87766554332 2333444556666678888788999999999999999875 5689999999999999999999988
Q ss_pred hhhHHHHHHhhcCCHHHHHHHHHHHHHhhh--------------------------hcccCCCChHhHHHHHHHHHHHHH
Q 016739 174 MNDICSPMIVLLENEADAFWCFEHTMRRLR--------------------------ENFRTNTGMIGVQSQLSTLSQIIR 227 (383)
Q Consensus 174 m~~I~a~lll~~~~E~~aF~~f~~l~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~lL~ 227 (383)
|+++.||.|.-..+|.++||||+.+|+.+. ..|.+.+....+...+..+..|++
T Consensus 544 msdllapvlcevqnesetfwcfvglmqgmsdlvapilaevldesdtfwcfvglmqna~fv~sp~d~dmd~~l~ylrelir 623 (781)
T KOG2224|consen 544 MSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIR 623 (781)
T ss_pred chhhcchhhhhhccccchhhhhhhhhccchhhhhhHHHhhhccccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHH
Confidence 888877777766666666666666665321 234445555677788889999999
Q ss_pred hHCHHHHHHHHhCCCCc--chhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcccchhhhhhh
Q 016739 228 TIDPKLHQHLEDLDGGE--YLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQC 305 (383)
Q Consensus 228 ~~~P~L~~hL~~~~i~~--~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 305 (383)
...|..|+||.++|-+. .+||.+|++.+|.++||...++|+|+..|+.-. ..
T Consensus 624 i~~~~fykhl~q~~ed~lellfchrwlllcfkref~ea~airiweacwa~y~-td------------------------- 677 (781)
T KOG2224|consen 624 IMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFPEAEAIRIWEACWAHYL-TD------------------------- 677 (781)
T ss_pred HhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhh-HH-------------------------
Confidence 99999999999988543 379999999999999999999999999997521 11
Q ss_pred chhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHh
Q 016739 306 GKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLS 379 (383)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~~ 379 (383)
-|.+|+|+||+-.+-+..+....-.++++..+.++.-.+|-+-++.+|..|..||.-
T Consensus 678 -----------------yfhlficlaiiaiy~ddvi~q~l~~demllhf~nlam~mdgelilrkar~ll~qfr~ 734 (781)
T KOG2224|consen 678 -----------------YFHLFICLAIIAIYADDVIAQNLAPDEMLLHFGNLAMHMDGELILRKARGLLHQFRL 734 (781)
T ss_pred -----------------HHHHHHHHHHHHHhhhHHHHhhcCchhHHHhhhhhhhhcCchhhHHHHHHHHHHHhh
Confidence 179999999999999999987778999999999999999999999999999999864
No 6
>KOG2223 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.3e-38 Score=295.39 Aligned_cols=259 Identities=22% Similarity=0.346 Sum_probs=213.0
Q ss_pred HHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHH-----HHhhcCCCCCCccchHHHHHHhhhHhHHhh
Q 016739 59 AKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRR-----DSLDQGWHVDGAISDKKVLQWMLGLHQIGL 133 (383)
Q Consensus 59 ~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~ 133 (383)
++-++.++|.|||+.+|+.||....|. ..+.+.+-......+.+ ++.++.. + ...+......+|+.
T Consensus 291 SrR~relWwQGiP~~VRGkvW~laIGN-el~it~elfd~~la~Aker~ak~~aeq~~---~-----sa~~re~sv~~i~L 361 (586)
T KOG2223|consen 291 SRRVRELWWQGIPPSVRGKVWSLAIGN-ELNITYELFDIALARAKEREAKSLAEQMS---N-----SAADREASVELIKL 361 (586)
T ss_pred hHHHHHHHHccCChhhcchhhHhhhCc-ccccCHHHHHHHHHHHHHHHHHHHHhhcc---c-----chhhhhcchhheee
Confidence 445799999999999999999999995 55555544333222211 1222221 1 22233456789999
Q ss_pred hhccCCCCCcCCCCh-hhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhh-hhcccCCCC
Q 016739 134 DVVRTDRSLVFYESE-TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL-RENFRTNTG 211 (383)
Q Consensus 134 Dv~RT~~~~~~f~~~-~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~-~~~~~~~~~ 211 (383)
|+.||||+..+|+.+ +-.+.|..+|.+|+.|.|++||+|||++|+|++++.+ ++.+||.||.+|+++- ..-|+. .+
T Consensus 362 DisrTfpsl~iFqk~GPy~d~L~~lL~AYt~yRpDvgYVqgmSFIaAvLllnm-d~~~AFiafANLLdkp~q~Aff~-~d 439 (586)
T KOG2223|consen 362 DISRTFPSLSIFQKGGPYHDDLHSLLGAYTCYRPDVGYVQGMSFIAAVLLLNM-DLADAFIAFANLLDKPCQQAFFR-VD 439 (586)
T ss_pred chhccCcceeeeccCCchHHHHHHHhhhheeecCccccccchHHHHHHHHHcC-CcHHHHHHHHHHhccHHHHHHHh-cC
Confidence 999999999999986 5689999999999999999999999999999999888 6899999999999983 333332 23
Q ss_pred hHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCC
Q 016739 212 MIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSST 291 (383)
Q Consensus 212 ~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~ 291 (383)
-..+..++..|+..+++..|+|+.||.++++.|.+|+++|+.++|+..+|++.++||||+|+-.|..
T Consensus 440 ~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlacRIwDvy~rdgee------------- 506 (586)
T KOG2223|consen 440 HSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLACRIWDVYCRDGEE------------- 506 (586)
T ss_pred cHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhhhhhheeeecchH-------------
Confidence 3478889999999999999999999999999999999999999999999999999999999987754
Q ss_pred CCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHH
Q 016739 292 SDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEAL 371 (383)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~ 371 (383)
|++-.+++||..+++++|.. |+..+.+++..++.++..+++...-.
T Consensus 507 --------------------------------Flfr~~lgIlklyepkLl~m--Df~~~~qfLtklp~dL~~eelF~~i~ 552 (586)
T KOG2223|consen 507 --------------------------------FLFRTALGILKLYEPKLLVM--DFIHVAQFLTKLPEDLTPEELFMHIA 552 (586)
T ss_pred --------------------------------HHHHHHHHHHHHccchHhhh--hHHHHHHHHHhCcccCCHHHHHHHHH
Confidence 77778889999999999864 99999999999999999888876554
Q ss_pred HHHH
Q 016739 372 KIQK 375 (383)
Q Consensus 372 ~l~~ 375 (383)
.+..
T Consensus 553 ~~~~ 556 (586)
T KOG2223|consen 553 YIQM 556 (586)
T ss_pred HHhh
Confidence 4443
No 7
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=4.8e-35 Score=297.14 Aligned_cols=241 Identities=27% Similarity=0.445 Sum_probs=196.7
Q ss_pred HHHHHHhhccCCC-C--CHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchH
Q 016739 43 ARRWHAAFSEDGH-L--DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDK 119 (383)
Q Consensus 43 ~~~W~~~l~~~~~-~--~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 119 (383)
...|.+.+..++. . .....++.+++.|||..+|+.||..++|..+.....+.......... .+......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gip~~~r~~vw~~~~~~~~~~~~~~~~y~~~~~~~--~~~~~~~~------ 254 (496)
T COG5210 183 DKLWISYLDPNPLSFLPVQLSKLRELIRKGIPNELRGDVWEFLLGIGFDLDKNPGLYERLLNLH--REAKIPTQ------ 254 (496)
T ss_pred HHHHHHHHhcccchhhhhhHHHHHHHHHhcCChHhhhhhHHHHhccchhhccCchHHHHHHHHH--HhcCCCcH------
Confidence 4467777776555 2 22344788888899999999999999999887655444332222111 11111100
Q ss_pred HHHHHhhhHhHHhhhhccCCCCCcCCCChhhHHH--HHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHH
Q 016739 120 KVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAK--LWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEH 197 (383)
Q Consensus 120 ~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~--L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~ 197 (383)
...++|++||.||+|.+..|+....... |.|||.+|+.++|++||||||++|+|+|++++.+|++||||+++
T Consensus 255 ------~~~~~i~~Dl~rt~~~~~~f~~~~s~~~~~L~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~ 328 (496)
T COG5210 255 ------EIISQIEKDLSRTFPDNSLFQTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVK 328 (496)
T ss_pred ------HHHHHHHccccccccccccccCcccccHHHHHHHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 2568999999999999999998766555 99999999999999999999999999999999879999999999
Q ss_pred HHHh-hhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhcc
Q 016739 198 TMRR-LRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAME 276 (383)
Q Consensus 198 l~~~-~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~ 276 (383)
||++ +.+.++ ..++.|+...+..+..+++..+|+||+||...++....|+++||+++|.+++|++.++||||.+|++|
T Consensus 329 L~~~~~l~~~~-~~~~~G~~~~~~~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg 407 (496)
T COG5210 329 LLKNYGLPGYF-LKNLSGLHRDLKVLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEG 407 (496)
T ss_pred HHHhccchhhc-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 9994 344443 55678999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhh
Q 016739 277 YNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLRE 343 (383)
Q Consensus 277 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~ 343 (383)
.+ ++.-+++|++...+.+++..
T Consensus 408 ~~---------------------------------------------~l~~~~~~~l~~~~~~l~~~ 429 (496)
T COG5210 408 SS---------------------------------------------MLFQLALAILKLLRDKLLKL 429 (496)
T ss_pred cH---------------------------------------------HHHHHHHHHHHhhhhhhhcc
Confidence 65 45667778888889888863
No 8
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=8.5e-35 Score=263.91 Aligned_cols=169 Identities=31% Similarity=0.603 Sum_probs=149.1
Q ss_pred hHhHHhhhhccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcc
Q 016739 127 GLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENF 206 (383)
Q Consensus 127 ~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~ 206 (383)
..++|++||.||+++...++.+..++.|.+||.+|+.++|++||+|||++|++++++++.+|++|||||.+++....+.+
T Consensus 46 ~~~~I~~Dv~rt~~~~~~~~~~~~~~~l~~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~ 125 (214)
T PF00566_consen 46 IFEQIDKDVNRTFPNSFLFKNEQNQKSLERILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDF 125 (214)
T ss_dssp CHHHHHHHHCTSSTSCCCSTTHHHHHHHHHHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGG
T ss_pred HHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhccccccc
Confidence 46899999999999778888889999999999999999999999999999999999888899999999999994444444
Q ss_pred cCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhc
Q 016739 207 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 286 (383)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~ 286 (383)
+ .++..+++..+..++.+++.++|+|++||++.++++..|+.+|+.|+|++++|.+.++|||| ++.+|+..
T Consensus 126 ~-~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~------- 196 (214)
T PF00566_consen 126 F-QPNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKF------- 196 (214)
T ss_dssp T-STTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTH-------
T ss_pred c-cccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCc-------
Confidence 4 44556899999999999999999999999999999999999999999999999999999999 66666531
Q ss_pred ccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHH
Q 016739 287 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLL 341 (383)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il 341 (383)
+++++++|++...|++||
T Consensus 197 -------------------------------------~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 197 -------------------------------------FLFFIALAILKYLRDQIL 214 (214)
T ss_dssp -------------------------------------HHHHHHHHHHHHTHHHHH
T ss_pred -------------------------------------HHHHHHHHHHHHHHHHhC
Confidence 378899999999999987
No 9
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=271.41 Aligned_cols=248 Identities=21% Similarity=0.314 Sum_probs=215.4
Q ss_pred HHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccCCC
Q 016739 61 VLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDR 140 (383)
Q Consensus 61 ~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~ 140 (383)
.+.+..++|+|+-+|+.+|..||++... .+..+. ..+.+.+.. ..+||+.|++|+..
T Consensus 347 qI~r~a~vdvpp~~R~~iW~aLL~l~e~-~~a~y~---------~IDk~Ts~~-------------tdrqievdiprchQ 403 (725)
T KOG1093|consen 347 QILREAYVDVPPLYRGFIWAALLQLEEN-HTAFYT---------LIDKGTSHS-------------TDRQIEVDIPRCHQ 403 (725)
T ss_pred HHHHHhccCCChhHhHHHHHHHhcCccc-cchhhh---------hhhcCCCCc-------------chhhhhcccchhhh
Confidence 3455667899999999999999986332 221111 111222111 34899999999999
Q ss_pred CCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhc-CCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHH
Q 016739 141 SLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLL-ENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQL 219 (383)
Q Consensus 141 ~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~-~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~ 219 (383)
...+.+++.++++|+|+|.+|+..+|...|.||+..+|+||++.. ++|+.||-|+..++-++..+|+..++..-++.++
T Consensus 404 yd~~lsSp~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~fflkdns~vikeyL 483 (725)
T KOG1093|consen 404 YDELLSSPKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHFFLKDNSNVIKEYL 483 (725)
T ss_pred cccccCCHHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHHHhhcCchhHHHHH
Confidence 999999999999999999999999999999999999999999864 6899999999999999887777666777889999
Q ss_pred HHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcccch
Q 016739 220 STLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVND 299 (383)
Q Consensus 220 ~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~~~~ 299 (383)
..|.++++.+||+|++||..+|+.+++|+++||+|+|+++||.+.++.+||-++..+++
T Consensus 484 s~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~~S--------------------- 542 (725)
T KOG1093|consen 484 SMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLGHSS--------------------- 542 (725)
T ss_pred HHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCCc---------------------
Confidence 99999999999999999999999999999999999999999999999999999986543
Q ss_pred hhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHh
Q 016739 300 KQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLS 379 (383)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~~ 379 (383)
|.+++++|++...|+.+|.+ ++.|++.++.+++ ++|++.++..+..+++--++
T Consensus 543 ------------------------Fplmi~vAil~~lR~~LLa~--nfne~illf~d~p-dldId~~Ires~~l~e~tP~ 595 (725)
T KOG1093|consen 543 ------------------------FPLMIGVAILIQLRDPLLAC--NFNECILLFSDLP-DLDIDVCIRESYHLMETTPK 595 (725)
T ss_pred ------------------------cHHHHHHHHHHHhhhhhhhC--CchhheeeeccCC-cccHHHHHHHHhhhhhCCCC
Confidence 78999999999999999986 9999999999999 99999999999999875444
No 10
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=275.33 Aligned_cols=306 Identities=43% Similarity=0.770 Sum_probs=259.2
Q ss_pred cccccccCCCCcHHHHHHhhccCCCCC-HHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhh--
Q 016739 31 VRFKARAGKTLSARRWHAAFSEDGHLD-IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLD-- 107 (383)
Q Consensus 31 ~~~~~~~~~~l~~~~W~~~l~~~~~~~-~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~-- 107 (383)
....+.....++.++|...+.+++... ..+.++.+..+||++.+|+.||.+|+|+++.+++.+++..++..++..+.
T Consensus 38 ~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r~~~~~~~~~l 117 (488)
T KOG2197|consen 38 IWVLIKPGKTLKPEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLRVARRPQYNEL 117 (488)
T ss_pred cceeeccccccchhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHHhhcccchHHH
Confidence 444556677888899999999988875 77788889999999999999999999999999999998877665543000
Q ss_pred -------------------------cCCCC----------------C--------------------------------C
Q 016739 108 -------------------------QGWHV----------------D--------------------------------G 114 (383)
Q Consensus 108 -------------------------~~~~~----------------~--------------------------------~ 114 (383)
...+. . .
T Consensus 118 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 197 (488)
T KOG2197|consen 118 LLVCQMMKSTVGNGLSYVVSSVVSDNRSPSLTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWD 197 (488)
T ss_pred HHHcchhhhhhccccceeeeEEeecCCCCcchhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcc
Confidence 00000 0 0
Q ss_pred cc-------------chHHHHHHhh--------------hHhHHhhhhccCCCCCcCCCChhh--HHHHHHHHHHHHHhc
Q 016739 115 AI-------------SDKKVLQWML--------------GLHQIGLDVVRTDRSLVFYESETN--QAKLWDVLAIYSWVD 165 (383)
Q Consensus 115 ~~-------------~~~~~~~~~~--------------~~~qI~~Dv~RT~~~~~~f~~~~~--~~~L~rIL~~y~~~~ 165 (383)
.. ......+|.. ....|.+||.||.+.+.++....+ ...|..||.+|+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~~~~~~~n~~~~~l~~iL~ty~~~~ 277 (488)
T KOG2197|consen 198 STTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLEFYEGEENPHLARLVDILLTYAVYD 277 (488)
T ss_pred cccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchhhhhhhcccccCHHHHHHHHhhccccc
Confidence 00 0111122222 224578999999999999998777 999999999999999
Q ss_pred CCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcc
Q 016739 166 NDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEY 245 (383)
Q Consensus 166 p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~ 245 (383)
+++||||||+++.+|++.++.+|.+|||||+.+|++...+|..+.. +++..+..+..+++..||.+|+||++.+....
T Consensus 278 ~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~~d~~--~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~ 355 (488)
T KOG2197|consen 278 FDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFRIDQS--GMQTQLAQLSSLIQELDPRLYQHLEKLDAGDL 355 (488)
T ss_pred CccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCccccc--cHHHHhhhhhhhccccCHHHHhhccccCCCcc
Confidence 9999999999999999999999999999999999999999987655 88999999999999999999999999999999
Q ss_pred hhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchH
Q 016739 246 LFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALS 325 (383)
Q Consensus 246 ~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (383)
.||++|++.+|.++|..++++++|+++++.-+++ +|.
T Consensus 356 ~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~-------------------------------------------~f~ 392 (488)
T KOG2197|consen 356 FFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSP-------------------------------------------HFH 392 (488)
T ss_pred ceeeehhhcccccccccccHHHHHHHHHhcCccc-------------------------------------------hHH
Confidence 9999999999999999999999999999876553 389
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHhhh
Q 016739 326 VFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLSKS 381 (383)
Q Consensus 326 l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~~~~ 381 (383)
+|++.|++....+.|+....++.++++.++.+....|+..++..|..++.++....
T Consensus 393 ~~~~~~~l~~~~~~l~~~~~~~~e~l~~i~~~~~~~d~~~~~~~A~~~~~~~k~~~ 448 (488)
T KOG2197|consen 393 LYVAPAILNKDPQTLMEQGKSFNEVLKHVNLLSEKADVLWVLVRAEALERQNKQME 448 (488)
T ss_pred HHHHHhhhhcchHHHHhcCccchhHHhhcccccccchhhhHHHHHHHHHHHHHhcc
Confidence 99999999999999999888999999999999999999999999999988876543
No 11
>KOG2222 consensus Uncharacterized conserved protein, contains TBC, SH3 and RUN domains [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=3.8e-31 Score=251.52 Aligned_cols=246 Identities=22% Similarity=0.379 Sum_probs=198.9
Q ss_pred HHHHHHh-CCCCccchHHHHHHhhCCCCCCCCHH--HHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhcc
Q 016739 61 VLRRIQR-GGIHPSIKGLVWEFLLGCYDPNSTFE--ERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVR 137 (383)
Q Consensus 61 ~lk~l~~-~GIP~~~R~~vW~~Llg~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~R 137 (383)
.++.+.+ +|||..+|+..|+.|.|........+ +...++.. .+.+. .+-.||++|+.|
T Consensus 161 k~~~llkeggiphslr~~lw~rlsga~~kkk~ae~sy~~ilk~~-----andk~--------------~~~~qiekdllr 221 (848)
T KOG2222|consen 161 KFEELLKEGGIPHSLRAFLWMRLSGALAKKKDAETSYEDILKAC-----ANDKL--------------MIGKQIEKDLLR 221 (848)
T ss_pred HHHHHHHcCCCCcchhHHHHHHhhhhhhhhccccccHHHHHHHh-----ccccc--------------chhHHHHHHHHH
Confidence 3555555 77999999999999999765432221 12222211 01111 134799999999
Q ss_pred CCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhh-hcccCCCChHh
Q 016739 138 TDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR-ENFRTNTGMIG 214 (383)
Q Consensus 138 T~~~~~~f~~~--~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~-~~~~~~~~~~~ 214 (383)
+.|++..|.+. .+..+|+|||++.++..|++||||||..|+|.+|+.+ .|+.|||++.++++.+. ++|| .+...|
T Consensus 222 ~lpnn~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~gviva~lllf~-~ee~afwmmaaiiedilp~nfy-sqtllg 299 (848)
T KOG2222|consen 222 ILPNNACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGMGVIVACLLLFC-EEENAFWMMAAIIEDILPANFY-SQTLLG 299 (848)
T ss_pred hCCCcceeeCCCCcchHHHHHHHhhheeecCCcccccCccHHHHHHHHHh-cchhHHHHHHHHHHHhcCchhh-hhhHhc
Confidence 99999999875 5799999999999999999999999999999988888 58899999999999965 4555 667889
Q ss_pred HHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCC
Q 016739 215 VQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDG 294 (383)
Q Consensus 215 ~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~ 294 (383)
++.+..++..+++.+.|.|-+.|..++++.++.+..||+|||+.++....++||||.||.+|...
T Consensus 300 iqaderv~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~killriwd~~fy~g~i~--------------- 364 (848)
T KOG2222|consen 300 IQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMKILLRIWDFFFYEGGIN--------------- 364 (848)
T ss_pred cchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecCcch---------------
Confidence 99999999999999999999999999999999999999999999999999999999999776421
Q ss_pred cccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHhcccCCC-CHHHHHHHH
Q 016739 295 RQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLR---EAKGLDDVVKILADITGNL-DAKKACNEA 370 (383)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~---~~~~~~~~~~~~~~l~~~~-d~~~~l~~a 370 (383)
+.-+.+.||......|-. ...+..+++..++++|..+ |+++++..|
T Consensus 365 ------------------------------ifql~i~ilkmkeqdi~~iaettensa~if~als~ip~~vtdve~l~~~~ 414 (848)
T KOG2222|consen 365 ------------------------------IFQLIIGILKMKEQDIKEIAETTENSADIFNALSDIPAEVTDVEKLFEQA 414 (848)
T ss_pred ------------------------------hHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHhCCchhhhHHHHHHHH
Confidence 334566788877776653 3367888999999999665 999999887
Q ss_pred HH
Q 016739 371 LK 372 (383)
Q Consensus 371 ~~ 372 (383)
..
T Consensus 415 ~~ 416 (848)
T KOG2222|consen 415 GE 416 (848)
T ss_pred hh
Confidence 54
No 12
>KOG1091 consensus Ypt/Rab-specific GTPase-activating protein GYP6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.1e-28 Score=239.83 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=196.8
Q ss_pred ccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhh-------cCC----------CCC------CccchHHHHHHhhhH
Q 016739 72 PSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLD-------QGW----------HVD------GAISDKKVLQWMLGL 128 (383)
Q Consensus 72 ~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~-------~~~----------~~~------~~~~~~~~~~~~~~~ 128 (383)
...|+.+|+++||+.|.+...+..+. ++.+..+.. +.. ... ............+..
T Consensus 27 s~~Rgv~Wrl~L~vLp~~~ss~id~~-~~~ra~~r~~r~~~L~dPh~~k~~~s~d~~idnPLSq~~~S~W~rfF~d~EL~ 105 (625)
T KOG1091|consen 27 SNLRGVRWRLLLGVLPSENSSWIDNL-RRLRANYRRLRRRLLIDPHNLKENHSPDLPIDNPLSQNPQSVWNRFFRDAELE 105 (625)
T ss_pred hhhhhHHHHHhheecCCCchhHHHHH-HHHhhhhhccccccccCccccccccCCCcccCCccccCCCchhhhhcCcHHHH
Confidence 45799999999999998754443322 222211110 000 000 112233344556688
Q ss_pred hHHhhhhccCCCCC-cCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCC-------------------H
Q 016739 129 HQIGLDVVRTDRSL-VFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLEN-------------------E 188 (383)
Q Consensus 129 ~qI~~Dv~RT~~~~-~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~-------------------E 188 (383)
+.|++||.||||++ .+|+.+..+.+|++||..|+.-+|.+||-||||++.||++.+... |
T Consensus 106 ~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E 185 (625)
T KOG1091|consen 106 KTIDQDVSRTFPEHSLFFQSPEVQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDKLGFEE 185 (625)
T ss_pred HhhcchhhccCcchhhhhcCchhhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhhcCcch
Confidence 89999999999999 888888999999999999999999999999999999999988731 2
Q ss_pred HH-----------HH--HHHHHHHHhhhhcc------------------c-CC---CChHhHHHHHHHHHHHHHhHCHHH
Q 016739 189 AD-----------AF--WCFEHTMRRLRENF------------------R-TN---TGMIGVQSQLSTLSQIIRTIDPKL 233 (383)
Q Consensus 189 ~~-----------aF--~~f~~l~~~~~~~~------------------~-~~---~~~~~~~~~~~~~~~lL~~~~P~L 233 (383)
.+ ++ -+++.+|..-..+| . ++ ...+.+......+..+|...|+.|
T Consensus 186 ~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~L 265 (625)
T KOG1091|consen 186 RDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAKVDKSL 265 (625)
T ss_pred hhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhhccHHH
Confidence 22 22 23444443211111 0 01 122345566678889999999999
Q ss_pred HHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHH-HHhhccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhh
Q 016739 234 HQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWE-LMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKN 312 (383)
Q Consensus 234 ~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD-~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (383)
+.||...||.|.+|..||+..||.|+||+.+++.||| ++++..+.
T Consensus 266 h~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr---------------------------------- 311 (625)
T KOG1091|consen 266 HSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPR---------------------------------- 311 (625)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCch----------------------------------
Confidence 9999999999999999999999999999999999999 66654432
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHh
Q 016739 313 VKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLS 379 (383)
Q Consensus 313 ~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~~ 379 (383)
-.++-++++++|...|+.+++. +...+++++.+.+..+|+++++.+|..+..-+.+
T Consensus 312 ---------~~Lv~~m~VsmLL~IRd~Llss--~~~tcL~~Lm~yP~~~Dv~~~iekAl~l~~~~~K 367 (625)
T KOG1091|consen 312 ---------GILVACMFVSMLLYIRDSLLSS--EYQTCLQYLMNYPEIIDVDKFIEKALHLQKLFPK 367 (625)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHh--cchhHHHHHhcCCCcCcHHHHHHHHHHHHHhccc
Confidence 2378899999999999999986 6777999999999999999999999998875554
No 13
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=99.96 E-value=2.5e-28 Score=241.27 Aligned_cols=249 Identities=18% Similarity=0.327 Sum_probs=203.7
Q ss_pred HHHHHhhccCCC-CCH--HHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHH
Q 016739 44 RRWHAAFSEDGH-LDI--AKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKK 120 (383)
Q Consensus 44 ~~W~~~l~~~~~-~~~--~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (383)
+.|++.+.+.|. ++. ...++++.+.|+|...|+.+|..+.|............ . .+.+... +
T Consensus 174 k~W~~~f~~~G~~~~~~qt~~~~Klv~~gipe~~rgeiW~l~sGav~~~l~~~Gey--g----kll~~~~-------G-- 238 (671)
T KOG4347|consen 174 KFWKKYFIKDGPNMNQIQTILLRKLLYNGFPEDPRGEIWYLASGAVASLLLNPGEY--G----KLLHSVT-------G-- 238 (671)
T ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHhcCCChHHHHHHhhhHHHHHhhcCcHHh--h----hhhhccc-------C--
Confidence 359999888765 343 34578888899999999999999999632211111100 0 0110000 0
Q ss_pred HHHHhhhHhHHhhhhccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHH
Q 016739 121 VLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMR 200 (383)
Q Consensus 121 ~~~~~~~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~ 200 (383)
..+-..+.|++|+.|..|+++-|+.+.+...|+|||.+|++.||+|||||-||-+++.+++.. .|+.|||+++.+.+
T Consensus 239 --~~~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR~vL~Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce 315 (671)
T KOG4347|consen 239 --KRSVATEEIEPDLGRSLPEHPAFQSEPGIAALRRVLTAYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCE 315 (671)
T ss_pred --CcccccccccCCCCCCCCcchhhhCCCchhhHHHHHHhhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHH
Confidence 011245789999999999999999999999999999999999999999999999999988887 68999999999999
Q ss_pred hhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCc
Q 016739 201 RLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPN 280 (383)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~ 280 (383)
.+.+.|+ +..+.|...++.+|+.+++.+.|.|+.|+..++ ...+...+||+++|-..+|++...||.|+||.+|+.
T Consensus 316 ~~ip~yy-s~~vvGtliDQ~vfe~lve~~lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG~r-- 391 (671)
T KOG4347|consen 316 IYIPDYY-SKTVVGTLIDQSVFEELVEDTLPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEGPR-- 391 (671)
T ss_pred Hhccccc-chhhhhhHHHHHHHHHHHHHhhhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcccH--
Confidence 9999988 456778889999999999999999999999999 566889999999999999999999999999998864
Q ss_pred chhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhccc
Q 016739 281 IFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT 358 (383)
Q Consensus 281 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~ 358 (383)
.++-+++||+..+.+.|++ +.|..++++.+.+..
T Consensus 392 -------------------------------------------vlFqiaLail~~N~~~il~-~~dDge~~~vl~~y~ 425 (671)
T KOG4347|consen 392 -------------------------------------------VLFQIALAILKQNAERILS-ATDDGEAMMVLGNYF 425 (671)
T ss_pred -------------------------------------------HHHHHHHHHHHhhHHHhcc-cCCchHHHHHHHHHH
Confidence 3666889999999999998 567778887666543
No 14
>KOG2595 consensus Predicted GTPase activator protein [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=220.50 Aligned_cols=238 Identities=20% Similarity=0.235 Sum_probs=194.8
Q ss_pred CCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccCCCCCcC----C
Q 016739 70 IHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVF----Y 145 (383)
Q Consensus 70 IP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~----f 145 (383)
+.+++|+.||+.|+|..-....... -....+-.+..+|+..||.|++...+. -
T Consensus 62 v~dslRk~vWp~L~~~~~n~~~~~~-----------------------~~~~~q~hkd~nQV~LDv~RSl~rfppg~p~~ 118 (395)
T KOG2595|consen 62 VNDSLRKDVWPELLALNINHLDATS-----------------------TLTPVQKHKDYNQVILDVERSLGRFPPGIPKE 118 (395)
T ss_pred ccHHHHHHHHHHHhccccCCCcccc-----------------------cCChhhhCcccceEEEehhhhhccCCCCCCHH
Confidence 3689999999999996322211100 011111233458999999999855442 1
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHHHHHHHH
Q 016739 146 ESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQI 225 (383)
Q Consensus 146 ~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 225 (383)
.....++.|..++......+|...|.||.||||.+|++++. |.+|+-+...+......+|+ .+++.+....+..+..+
T Consensus 119 ~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~g-E~~Al~l~E~L~~~~lrdfM-~~Tld~t~~qL~~i~~i 196 (395)
T KOG2595|consen 119 LRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVVG-ELEALSLMEELSTLHLRDFM-LPTLDFTVRQLRLISPI 196 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhhh-hHhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 22234677777777777889999999999999999999995 99999999999877666776 46678889999999999
Q ss_pred HHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCC-ChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcccchhhhhh
Q 016739 226 IRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF-SFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQ 304 (383)
Q Consensus 226 L~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l-~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
++..+|+||+.|++..+.+ +|+.+|++|+|+|.+ ++..++|++|+|+++.+-
T Consensus 197 Ik~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl-------------------------- 249 (395)
T KOG2595|consen 197 IKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPL-------------------------- 249 (395)
T ss_pred HhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcc--------------------------
Confidence 9999999999999988876 899999999999999 799999999999997653
Q ss_pred hchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q 016739 305 CGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYL 378 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~ 378 (383)
..+|++++++...+++|+++.++..-+..+++.++.++..+.+++.+..++.++.
T Consensus 250 -------------------~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~lp~d~lik~s~~~i~~~~ 304 (395)
T KOG2595|consen 250 -------------------LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQDLPYDTLIKESVLLITRKP 304 (395)
T ss_pred -------------------hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCccccCHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999999999999999999977776654
No 15
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.95 E-value=7e-27 Score=234.37 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=205.4
Q ss_pred HHHHhhccCCCC----CHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHH
Q 016739 45 RWHAAFSEDGHL----DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKK 120 (383)
Q Consensus 45 ~W~~~l~~~~~~----~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (383)
.|++++.. +++ |..+ +-...+.|+|..-|+.+|.++.--+..+ ..+. ..+...+-.....
T Consensus 551 ~wek~~e~-~~~~~k~d~ed-~~~~l~~gvprsrrgeiwtflA~q~~~~-------------~~l~-~~kr~~~~p~~~l 614 (948)
T KOG4436|consen 551 TWEKILER-TRIKIKKDMED-LHSALRTGVPRSRRGEIWTFLAEQHSLN-------------HALP-DKKRPPDFPYKEL 614 (948)
T ss_pred HHHHHHHH-hhhcccccHHH-HHHHHHccCchhhhHHHHHHHHHHHHHh-------------ccCC-cccCCCCCChHHH
Confidence 69999887 333 3444 5666778999999999999997421110 0011 1111111122334
Q ss_pred HHHHhhhHhHHhhhhccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHH
Q 016739 121 VLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHT 198 (383)
Q Consensus 121 ~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l 198 (383)
.++..+..+.|..|.-||||++++|+.. .++..|.|+|.+|+..+|++|||||..++|+++|+.+ +|+.||-++..|
T Consensus 615 lkqLte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~Lkayslld~e~gycqg~~fv~gvlllh~-~e~~afellk~L 693 (948)
T KOG4436|consen 615 LKQLTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLLKAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELLKFL 693 (948)
T ss_pred HHHHHHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHHHHhcccCccccccCcchhhhhhhHhhc-chhhHHHHHHHH
Confidence 4567777889999999999999999884 6799999999999999999999999999999999999 699999999999
Q ss_pred HHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCC
Q 016739 199 MRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYN 278 (383)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~ 278 (383)
|....-.--+-+.|..++..++.+++++..+.++||+|++++.|.|.+|+.+||+|.|+..||+..+.||+|.++..|..
T Consensus 694 M~~r~~r~qy~pdm~~lq~qmyqLsrl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq~te 773 (948)
T KOG4436|consen 694 MFDRGMRKQYRPDMKKLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTE 773 (948)
T ss_pred HHHHhhHhhhchHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccc
Confidence 97743222224567789999999999999999999999999999999999999999999999999999999999998754
Q ss_pred CcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhccc
Q 016739 279 PNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT 358 (383)
Q Consensus 279 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~ 358 (383)
.+.-+++++|..++.-|++ +.++++|+.+++++.
T Consensus 774 ---------------------------------------------vifK~a~~llsv~k~~l~e-~dn~e~i~d~~k~~~ 807 (948)
T KOG4436|consen 774 ---------------------------------------------VIFKVALSLLSVHKQLLLE-KDNFEEIVDFLKTTL 807 (948)
T ss_pred ---------------------------------------------hhhhhHHHHHHhhHHHHHh-hhhHHHHHHHHHHhh
Confidence 3566788888888877777 679999999999887
Q ss_pred CCC
Q 016739 359 GNL 361 (383)
Q Consensus 359 ~~~ 361 (383)
+.+
T Consensus 808 p~~ 810 (948)
T KOG4436|consen 808 PKM 810 (948)
T ss_pred hhh
Confidence 665
No 16
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=99.92 E-value=5e-25 Score=216.44 Aligned_cols=261 Identities=23% Similarity=0.402 Sum_probs=200.2
Q ss_pred ccCCCCcHHHHHHhhccCCC-------------CCHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHH
Q 016739 36 RAGKTLSARRWHAAFSEDGH-------------LDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQR 102 (383)
Q Consensus 36 ~~~~~l~~~~W~~~l~~~~~-------------~~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~ 102 (383)
.....++.++|..+..+... ......+..+...|||.+.|..+|..+++..-.+ .........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~gip~~~r~~~W~l~~~~~~~~----~~~~~~~l~ 174 (397)
T KOG1102|consen 99 KPLLSLTLDLWDVKLLEGEQELTALSSSWLKVILRRPLKLSRRVLVGIPDELRGLVWQLLLYAVEES----LFDSLDELY 174 (397)
T ss_pred cccccccchhHHHHhhhhHHHHHHHHHHhhhhccccHHHHHHHhhccccHHHHHHHHHHhcccHhhh----hhhhHHHHH
Confidence 33445666666666544211 1233446667778999999999999999852111 011111111
Q ss_pred HHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCCcccChhhHHHH
Q 016739 103 RDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSP 180 (383)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~ 180 (383)
+.......+ . ..++| .|+.||+|.+..|... .++++|.+||.+|+.++|++||||||..++++
T Consensus 175 ~~~~~~~~~------~--------~~~~~-~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ 239 (397)
T KOG1102|consen 175 RLQLDEPEP------H--------ESEII-RDLSRTFPAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAP 239 (397)
T ss_pred HHhhccCCC------c--------hhHHH-hhccCcCcchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhh
Confidence 111111110 0 12566 9999999999998773 56899999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCC
Q 016739 181 MIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF 260 (383)
Q Consensus 181 lll~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l 260 (383)
++.++. |++|||+++.+|......++ .....+++.....++.+++...|.++.|+...++...+|+.+|++|+|+..+
T Consensus 240 ll~~~~-ee~af~~lv~l~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~ 317 (397)
T KOG1102|consen 240 LLLYLP-EEEAFPLLVKLMKNYGLDLL-SPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKF 317 (397)
T ss_pred hhccCc-hhhhhhhhhhhhhccchhcc-cccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccc
Confidence 999995 99999999999998654444 6667799999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHH
Q 016739 261 SFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKL 340 (383)
Q Consensus 261 ~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~i 340 (383)
|++.+.|+||+++.+|.. .+..+.++++....+.+
T Consensus 318 p~~~~~ri~d~~~~~g~~---------------------------------------------i~~~~~~~l~~~~~~~~ 352 (397)
T KOG1102|consen 318 PLELVLRIWDALFVEGVS---------------------------------------------ILFRFSLALLKHKADDL 352 (397)
T ss_pred cHHHHHHHhHHHHHhchH---------------------------------------------HHHHHHHHHhhhhhHHH
Confidence 999999999999998832 35667778888888888
Q ss_pred HhhcCChHHHHHHHhc-ccCCCCHH
Q 016739 341 LREAKGLDDVVKILAD-ITGNLDAK 364 (383)
Q Consensus 341 l~~~~~~~~~~~~~~~-l~~~~d~~ 364 (383)
+.. +++.+++++.. ++...|..
T Consensus 353 ~~~--~~e~~~~~l~~~~~~~~~~~ 375 (397)
T KOG1102|consen 353 LDL--DFESLLSYLRVDLPKSYDSE 375 (397)
T ss_pred hhc--cHHHHHHHHhcccHhhcCcc
Confidence 874 69999999885 44444433
No 17
>KOG2221 consensus PDZ-domain interacting protein EPI64, contains TBC domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=5.5e-22 Score=172.55 Aligned_cols=215 Identities=21% Similarity=0.305 Sum_probs=160.5
Q ss_pred CCccccCCCccCCCCccccccccCCCCcHHHHHHhhccCCCC--CHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCH
Q 016739 15 DSYYPIRPECQADVPKVRFKARAGKTLSARRWHAAFSEDGHL--DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTF 92 (383)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~W~~~l~~~~~~--~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~ 92 (383)
|.|+++--+-....+..+.... .-+-++.+|-.+++++..- ...+.++--++.|||+.+|++.|.+|.|.......+
T Consensus 48 dr~gfi~~~q~a~~~k~~~~~~-~L~~ReskwL~mldnw~~~m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~~n 126 (267)
T KOG2221|consen 48 DRFGFIEGEQGAQGKKEPETRG-ELRYRESKWLHMLDNWHEEMRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPPKN 126 (267)
T ss_pred cccceeecccccccCCCcccHH-HHHhhHHHHHHHHHHHHHHHHhccccccchhhcCCCcccchhHHHhhcCCCCCCCCC
Confidence 5566654444433333221111 1122445788888763221 122345666778999999999999999976543322
Q ss_pred HHHHHHHHHHHHHh-hcCCCCCCccchHHHHHHhhhHhHHhhhhccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCC
Q 016739 93 EERNQIRQQRRDSL-DQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIG 169 (383)
Q Consensus 93 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~~~~~~f~~~--~~~~~L~rIL~~y~~~~p~ig 169 (383)
..+- .++. ..+. -...+.|++|+.|-||.+.+|.+. .+++.|.|+|.+|..++|+.|
T Consensus 127 p~~~------~~~~~~pG~--------------p~t~e~i~kdl~rqfp~hemf~s~~k~gkqelfr~lka~ti~~pe~g 186 (267)
T KOG2221|consen 127 PVVF------DELGPAPGD--------------PKTAEGIHKDLHRQFPFHEMFGSSGKTGKQELFRVLKAYTIYKPEEG 186 (267)
T ss_pred cchh------hhccCCCCC--------------CcchhhhccccccCCCcccccccccccchHHHHHHHHHHHHhCchhh
Confidence 1110 0110 0111 114578999999999999999875 579999999999999999999
Q ss_pred cccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhH
Q 016739 170 YVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAF 249 (383)
Q Consensus 170 Y~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~ 249 (383)
|||+-.-|+++++..+ .+++|||||+.+.+++.+.|+ ...+..++.+-..+..|+++.+|..|.|+....+++.+|..
T Consensus 187 ~cq~qapiaa~llmhm-p~rdaf~~~vqicekylqgy~-~sgleaiq~dg~il~~Llkk~~~p~~rH~~~~kvdp~lym~ 264 (267)
T KOG2221|consen 187 YCQAQAPIAAVLLMHM-PARDAFWCFVQICEKYLQGYY-SSGLEAIQNDGGILEGLLKKASPPPYRHLGGDKVDPLLYMT 264 (267)
T ss_pred hhhhhchHHHHHHhcc-cHHHHHHHHHHHHHHHccccc-ccchhhhhcccHHHHHHHHhcCCCCCcccccCCCCHHHhhh
Confidence 9999999999988888 588999999999999888877 45677899999999999999999999999999999999999
Q ss_pred HHH
Q 016739 250 RML 252 (383)
Q Consensus 250 ~Wf 252 (383)
.||
T Consensus 265 ewF 267 (267)
T KOG2221|consen 265 EWF 267 (267)
T ss_pred ccC
Confidence 997
No 18
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=99.63 E-value=5.7e-15 Score=140.78 Aligned_cols=200 Identities=17% Similarity=0.247 Sum_probs=151.3
Q ss_pred hHHhhhhccCCCCCcCC--CChhhHHHHHHHHHHHHHhcCCCCccc--ChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhh
Q 016739 129 HQIGLDVVRTDRSLVFY--ESETNQAKLWDVLAIYSWVDNDIGYVQ--GMNDICSPMIVLLENEADAFWCFEHTMRRLRE 204 (383)
Q Consensus 129 ~qI~~Dv~RT~~~~~~f--~~~~~~~~L~rIL~~y~~~~p~igY~Q--Gm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~ 204 (383)
.+|++|..|-.-...-- ...+....|..++.-|+.. .++.|.. |.-.+.-|+++.-.+-.+.|-||..+++++.|
T Consensus 68 ~~lr~DC~~~~d~l~n~ee~~v~vv~dlES~iTfYCK~-Rn~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIP 146 (669)
T KOG3636|consen 68 CALRNDCRKLADGLKNKEEDKVPVVSDLESFITFYCKK-RNMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIP 146 (669)
T ss_pred hHHHHHHHHHHhhcCCchhhccchhHhhhhHhhhhhhc-cCCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccC
Confidence 56778877643221100 0013356788888888763 3456665 45566777777666789999999999999877
Q ss_pred cccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhh
Q 016739 205 NFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSL 284 (383)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~ 284 (383)
.-..... .-+..|+-||+.++|+|++||....+.|.+|+..||-+||+...+.+.+.-+||.++-.++..
T Consensus 147 kdcrpkg-----~~Fh~FRLLlqYHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF----- 216 (669)
T KOG3636|consen 147 KDCRPKG-----QIFHLFRLLLQYHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPF----- 216 (669)
T ss_pred CCCCCCC-----ccchHHHHHHHhcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCce-----
Confidence 6554332 246788999999999999999999999999999999999999999999999999999765421
Q ss_pred hcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-cCChHHHHHHHhcccCCC--
Q 016739 285 YESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLRE-AKGLDDVVKILADITGNL-- 361 (383)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~-~~~~~~~~~~~~~l~~~~-- 361 (383)
++.|+++-||...|++||.. ..+-+++++++.+++..+
T Consensus 217 ---------------------------------------~vffLaliiLiNake~ILq~~sdsKEe~ikfLenmp~~L~~ 257 (669)
T KOG3636|consen 217 ---------------------------------------LVFFLALIILINAKEEILQVKSDSKEEAIKFLENMPAQLSV 257 (669)
T ss_pred ---------------------------------------ehHHHHHHHhcccHHHHhhhccccHHHHHHHHHcCchhccc
Confidence 34556778889999999942 346899999999999777
Q ss_pred -CHHHHHHHHHHHHHHHH
Q 016739 362 -DAKKACNEALKIQKKYL 378 (383)
Q Consensus 362 -d~~~~l~~a~~l~~~y~ 378 (383)
|+..+++.|.....+-+
T Consensus 258 eDvpDffsLAqyY~~KTP 275 (669)
T KOG3636|consen 258 EDVPDFFSLAQYYSDKTP 275 (669)
T ss_pred ccchhHHHHHHHHhhcCh
Confidence 77788888876654433
No 19
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.55 E-value=4.4e-14 Score=143.00 Aligned_cols=201 Identities=18% Similarity=0.203 Sum_probs=163.2
Q ss_pred HHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhccCC
Q 016739 60 KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTD 139 (383)
Q Consensus 60 ~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~RT~ 139 (383)
..++.++.+|+|...|..+|..|+..... + ...+.+.+..+..... ...+ ..++-.|..|+.||.
T Consensus 175 ~~l~e~Ve~~~p~~frli~~qlLssatd~----~-q~~I~e~~sdl~~~s~-----~~Ek-----~~~~~~Irrdi~~~~ 239 (948)
T KOG4436|consen 175 HKLKELVEGGIPMHFRLIRWQLLSSATDR----E-QALIFEDYSDLAPCSS-----QQEK-----ELHIGIIRRDIERTY 239 (948)
T ss_pred hhhHHHHhcCCchHHHHHHHHHhcccccc----h-hhHHHHHHHHHhhhcc-----hhhh-----hHHHHHHHHHhhccC
Confidence 34788899999999999999999975221 1 1112222222211100 0000 114568999999999
Q ss_pred CCCcCCCChh---------hHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhhhhcccCCC
Q 016739 140 RSLVFYESET---------NQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNT 210 (383)
Q Consensus 140 ~~~~~f~~~~---------~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~~~~~~~~~ 210 (383)
|.+.+|+... .++.|.|+..+|+...-++|||||=+.+++.+++++ +++.+|..++.+|..++..-.+.+
T Consensus 240 ~eh~~fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifsqGs~~m~Gll~l~~-~~E~assv~~~lm~~~rl~~l~kp 318 (948)
T KOG4436|consen 240 PEHYFFKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFSQGSAFMVGLLLLQM-PVEEASSVKVQLMILYRLRELSKP 318 (948)
T ss_pred cceeeeccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhccchHHHHHHHHhcC-cHHHHHHHHHHHHHhhcccccCCc
Confidence 9999998742 489999999999999999999999999999888888 688999999999998776666677
Q ss_pred ChHhHHHHHHHHHHHHHhHCH-HHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhcc
Q 016739 211 GMIGVQSQLSTLSQIIRTIDP-KLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAME 276 (383)
Q Consensus 211 ~~~~~~~~~~~~~~lL~~~~P-~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~ 276 (383)
.+..+-..+..++...+...| .++.|+.+.+++...|...||++.|...+|+.-.-++.|.+.+.|
T Consensus 319 e~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~eg 385 (948)
T KOG4436|consen 319 EMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSSEG 385 (948)
T ss_pred ccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhcccccccccccc
Confidence 777788889999999999999 999999999999999999999999999999999999999988765
No 20
>KOG1648 consensus Uncharacterized conserved protein, contains RUN, BRK and TBC domains [General function prediction only]
Probab=99.33 E-value=6.8e-14 Score=134.87 Aligned_cols=274 Identities=22% Similarity=0.383 Sum_probs=197.0
Q ss_pred ccccCCCCcHHHHHHhhccCCCCCHHHHHHHHHhCCCCccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 016739 34 KARAGKTLSARRWHAAFSEDGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVD 113 (383)
Q Consensus 34 ~~~~~~~l~~~~W~~~l~~~~~~~~~~~lk~l~~~GIP~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 113 (383)
++.++..++++-|+++..+. .+..-+.++..+++|+....|+.+|+.+++-+...+...+.+ ...+..
T Consensus 524 pcda~~glt~~~W~qy~~d~-t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d-----------~~e~~~ 591 (813)
T KOG1648|consen 524 PCDASAGLTEKFWKQYRADP-TIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFED-----------PNEPTC 591 (813)
T ss_pred CCCccccccHHHHHHHhcCC-chHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcC-----------CCccHH
Confidence 46677889999999998764 666667789999999999999999999998654433221100 011111
Q ss_pred CccchHHHHHHh-hhHhHHhhhhccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHH
Q 016739 114 GAISDKKVLQWM-LGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAF 192 (383)
Q Consensus 114 ~~~~~~~~~~~~-~~~~qI~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF 192 (383)
+...+.+...|. .....|++|+.|+.++..+|++..+.++ +++..+|...+-+-||.|||.++.+|++..+.||..+-
T Consensus 592 s~~y~~~l~~~~~~~~~~~~kd~e~~~~~~~~fs~~~~les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~ 670 (813)
T KOG1648|consen 592 SQHYDRNLITLFRANLHRIDKDVERCDRNLMFFSNKDNLES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTL 670 (813)
T ss_pred HHHHHHHHHHHHhhheeeecchhhhCcchheeecCCcchhh-heeeeeeeccccccccccchhhccCCcCCChhhccccc
Confidence 111122222222 2457899999999999999999998888 88999999999999999999999999999998888887
Q ss_pred HHHHHHHHhhhhcccCCCChHhHHHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHH
Q 016739 193 WCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELM 272 (383)
Q Consensus 193 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~ 272 (383)
-||.-+|-.-+..|..-+ ++...+-.+. +++..+|-. .-+. ......++||..-|.++++.+-...+|.++
T Consensus 671 e~~s~~~~~q~~~~~q~~---~~~~~l~~~r-~~~v~~~l~-s~id----~~qa~~f~~~~~~~~~~~s~~~~~~~~~~~ 741 (813)
T KOG1648|consen 671 ECFSLLMLRQRGKFPQRP---GMSKCLLNLR-LIQVVDPLI-SDID----YAQALSFRWFLLDFKRELSYECTYKVWEVI 741 (813)
T ss_pred CCCcHHHHHhcccCCCCC---Cccccccccc-chhhhcchh-cchh----hhhhcceeeeccCcccccCCCCcceeeEee
Confidence 788877776666665433 2222222222 556666622 1111 112345999999999999999999999999
Q ss_pred hhccCCCcchhhhcccCCCCCCcccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHH
Q 016739 273 WAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVK 352 (383)
Q Consensus 273 l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~ 352 (383)
++...- +.. .+|.+|+..+. ....+.++...-+..++++
T Consensus 742 ~~~~~~-----------------------------------~~~-----~~~~i~~g~~~-~~~~~~~~t~~~~~t~~i~ 780 (813)
T KOG1648|consen 742 WAAQRL-----------------------------------RIT-----DDFAIFFGLAT-TNYHDVLITNNFDYTDMIK 780 (813)
T ss_pred cccccc-----------------------------------ccC-----cchhhhhhhHH-HhhHHHHhhcccchHHHHH
Confidence 864321 111 23788998887 6667777766778999999
Q ss_pred HHhcccCCCCHHHHHHHH
Q 016739 353 ILADITGNLDAKKACNEA 370 (383)
Q Consensus 353 ~~~~l~~~~d~~~~l~~a 370 (383)
+++.+....|.+.++.-|
T Consensus 781 ~~~~~~e~~~c~r~~~~~ 798 (813)
T KOG1648|consen 781 FFNEMAERHDCSRLLSSA 798 (813)
T ss_pred HHHHHHhhhhhHHHHhcC
Confidence 999999888888777655
No 21
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.90 E-value=6.6e-08 Score=88.69 Aligned_cols=252 Identities=13% Similarity=0.152 Sum_probs=164.9
Q ss_pred HHHHHHhCCC---CccchHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCccchHHHHHHhhhHhHHhhhhcc
Q 016739 61 VLRRIQRGGI---HPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVR 137 (383)
Q Consensus 61 ~lk~l~~~GI---P~~~R~~vW~~Llg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~R 137 (383)
.++.+.+.|- ...+|+.|+..|..-.|.....+.-.......-.+. +...++..+-.+. |..
T Consensus 34 elkqlarqgywaqshalrgkvyqrlirdipcrtvtpdasvysdivgkiv--gkhsssclplpef-------------vdn 98 (559)
T KOG2801|consen 34 ELKQLARQGYWAQSHALRGKVYQRLIRDIPCRTVTPDASVYSDIVGKIV--GKHSSSCLPLPEF-------------VDN 98 (559)
T ss_pred HHHHHHhcchHHhhhhhhhHHHHHHHhcCCccccCCchhHHHHHHHHHh--ccCCcccccchhh-------------ccc
Confidence 4788888887 567999999999987777644333222222111111 2222221111110 111
Q ss_pred C-CCCCcCCCChhhHHHHHHHHHHHHHhcCCCCcccChhhHHHHHHhhcCCHHHHHHHHHHHHHhh-hhcccCCCChHhH
Q 016739 138 T-DRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL-RENFRTNTGMIGV 215 (383)
Q Consensus 138 T-~~~~~~f~~~~~~~~L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~~~-~~~~~~~~~~~~~ 215 (383)
| .|.. --+..+.-..+.||.+.+...|+|++|..+..+++.++...-+|+++|--.++++.-- .+.-.-++.....
T Consensus 99 tqvpsy--clnargegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflaf 176 (559)
T KOG2801|consen 99 TQVPSY--CLNARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAF 176 (559)
T ss_pred CcCchh--hhcCcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHH
Confidence 1 1111 1234567788999999999999999999999999988877778999887666655321 1111113344466
Q ss_pred HHHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCc
Q 016739 216 QSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGR 295 (383)
Q Consensus 216 ~~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~ 295 (383)
...+..|..++.+....-++.+....-+.......|-.-+| .++|+--..|++|+|+.+|+.
T Consensus 177 esscmtfgdlvnkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdvflvegyk----------------- 238 (559)
T KOG2801|consen 177 ESSCMTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDVFLVEGYK----------------- 238 (559)
T ss_pred HhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhheeecchH-----------------
Confidence 67888899999988888777776544344445567765555 569999999999999998864
Q ss_pred ccchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHH----HhhcCChHHHHHHHhcccCCCCHHHHHHHHH
Q 016739 296 QVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKL----LREAKGLDDVVKILADITGNLDAKKACNEAL 371 (383)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~i----l~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~ 371 (383)
.+..+++|||....+.- |++..-..++-.+..++.+...+++++.+|.
T Consensus 239 ----------------------------vlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvspekllekaf 290 (559)
T KOG2801|consen 239 ----------------------------VLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAF 290 (559)
T ss_pred ----------------------------HHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 34556778887665533 2323334566677888999999999999987
Q ss_pred HHHH
Q 016739 372 KIQK 375 (383)
Q Consensus 372 ~l~~ 375 (383)
.+.-
T Consensus 291 airl 294 (559)
T KOG2801|consen 291 AIRL 294 (559)
T ss_pred HHHH
Confidence 6653
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.49 E-value=0.0041 Score=67.57 Aligned_cols=181 Identities=9% Similarity=0.131 Sum_probs=127.8
Q ss_pred HHHHHHHHHHhcCCCCcccChhhHHHHHHhhc-CCHHHHHHHHHHHHHhhh------hcccC--CCCh----Hh----HH
Q 016739 154 LWDVLAIYSWVDNDIGYVQGMNDICSPMIVLL-ENEADAFWCFEHTMRRLR------ENFRT--NTGM----IG----VQ 216 (383)
Q Consensus 154 L~rIL~~y~~~~p~igY~QGm~~I~a~lll~~-~~E~~aF~~f~~l~~~~~------~~~~~--~~~~----~~----~~ 216 (383)
-.+++..|..+++.-+|. |....++.+++++ .|-+.+.-.+.++-..+. +.... ..+. .| ..
T Consensus 1086 ~l~~~~~~~~~~~~~~y~-g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~ 1164 (1296)
T PF14961_consen 1086 SLHILFEFIHFCLQGSYP-GHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYF 1164 (1296)
T ss_pred hhHHHhhhhcccCCCCCC-CchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhh
Confidence 344555555555555554 7777777777666 444444444333332221 11110 0000 11 12
Q ss_pred HHHHHHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCCChhHHHHHHHHHhhccCCCcchhhhcccCCCCCCcc
Q 016739 217 SQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQ 296 (383)
Q Consensus 217 ~~~~~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l~~~~vlriWD~~l~~~~~~~~f~~~~~~~~~~~~~~ 296 (383)
..+..++.+|+...|.++.-|...|..+...|.+|+.-+|=+.+++..+....=..+..|+.
T Consensus 1165 ~~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G~d------------------ 1226 (1296)
T PF14961_consen 1165 CSCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYGPD------------------ 1226 (1296)
T ss_pred hHHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcCcc------------------
Confidence 36789999999999999999999999999999999999999999999999888878877764
Q ss_pred cchhhhhhhchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhccc-CCCCHHHHHHHHHHHHH
Q 016739 297 VNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT-GNLDAKKACNEALKIQK 375 (383)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~-~~~d~~~~l~~a~~l~~ 375 (383)
|.+|+|+|++...++.||... .-.++..+++.-+ ....+..-+.-...|-.
T Consensus 1227 ---------------------------yqvY~~VailkHlq~~ilq~~-q~q~L~~flke~~l~gF~~~~~~~yM~~Le~ 1278 (1296)
T PF14961_consen 1227 ---------------------------YQVYICVAILKHLQPEILQHT-QTQDLQVFLKEEALRGFRVSDYLEYMENLEQ 1278 (1296)
T ss_pred ---------------------------ceeehhHHHHHHhhHHHHHhh-hhchHHHHhhhccccceeHHhHHHHHHHHHH
Confidence 689999999999999999854 4555666776433 56778888888888888
Q ss_pred HHHhhh
Q 016739 376 KYLSKS 381 (383)
Q Consensus 376 ~y~~~~ 381 (383)
+|...+
T Consensus 1279 ~yR~~v 1284 (1296)
T PF14961_consen 1279 RYRPRV 1284 (1296)
T ss_pred HhHhHH
Confidence 887643
No 23
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=87.44 E-value=0.2 Score=49.02 Aligned_cols=33 Identities=39% Similarity=0.976 Sum_probs=31.4
Q ss_pred CCcccChhhHHHHHHhhcCCHHHHHHHHHHHHH
Q 016739 168 IGYVQGMNDICSPMIVLLENEADAFWCFEHTMR 200 (383)
Q Consensus 168 igY~QGm~~I~a~lll~~~~E~~aF~~f~~l~~ 200 (383)
+|..|||++++||+|.-..+|.++||||+.+|+
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmq 598 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQ 598 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhc
Confidence 788899999999999988899999999999997
No 24
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=34.51 E-value=27 Score=20.29 Aligned_cols=15 Identities=33% Similarity=0.709 Sum_probs=10.8
Q ss_pred CCcccChhhHHHHHH
Q 016739 168 IGYVQGMNDICSPMI 182 (383)
Q Consensus 168 igY~QGm~~I~a~ll 182 (383)
-||+||+.+..--.+
T Consensus 3 sgyiqgipdflkgyl 17 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYL 17 (31)
T ss_pred cccccccHHHHHHHH
Confidence 379999988765433
No 25
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=30.87 E-value=30 Score=35.47 Aligned_cols=56 Identities=30% Similarity=0.367 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHh
Q 016739 324 LSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLS 379 (383)
Q Consensus 324 ~~l~~~~ail~~~~~~il~~~~~~~~~~~~~~~l~~~~d~~~~l~~a~~l~~~y~~ 379 (383)
..++.++..+.......+....+.+++...++...+.+|+.+....|..+...+..
T Consensus 431 ~~~~~~A~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~a~~l~~~~~~ 486 (488)
T KOG2197|consen 431 LWVLVRAEALERQNKQMEEPPEVMDEIESILQITAGPLDAGKLRIGADKLHRTFRM 486 (488)
T ss_pred hhHHHHHHHHHHHHHhccccccchhhhhhcccCCCCCCCccccccccccccccccc
Confidence 46677777777777777777778888888999999999999999888777665543
No 26
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=28.29 E-value=90 Score=21.55 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=32.9
Q ss_pred HHHHHHHhHCHHHHHHHHhCCCCcchhhHHHHHHhcCcCC
Q 016739 221 TLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF 260 (383)
Q Consensus 221 ~~~~lL~~~~P~L~~hL~~~~i~~~~f~~~Wf~tlF~~~l 260 (383)
.|-++--++.|+--+.|++.||+.+.-.++-|++||+++.
T Consensus 5 ~FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~VM 44 (56)
T PF10815_consen 5 EFMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKVM 44 (56)
T ss_pred HHHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHHH
Confidence 3556667889998899999999998888889999987653
No 27
>PF13041 PPR_2: PPR repeat family
Probab=23.79 E-value=1.1e+02 Score=19.89 Aligned_cols=26 Identities=12% Similarity=0.177 Sum_probs=21.1
Q ss_pred HHHHHHHhCCCCcchhhHHHHHHhcC
Q 016739 232 KLHQHLEDLDGGEYLFAFRMLMVLFR 257 (383)
Q Consensus 232 ~L~~hL~~~~i~~~~f~~~Wf~tlF~ 257 (383)
++++.+.+.|+.|..+++.-++..|+
T Consensus 24 ~l~~~M~~~g~~P~~~Ty~~li~~~~ 49 (50)
T PF13041_consen 24 KLFKEMKKRGIKPDSYTYNILINGLC 49 (50)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHc
Confidence 47778888999999998888877665
No 28
>PRK10878 hypothetical protein; Provisional
Probab=21.48 E-value=1.2e+02 Score=22.43 Aligned_cols=29 Identities=14% Similarity=0.231 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhHCHHHHHHHHhCCCCc
Q 016739 216 QSQLSTLSQIIRTIDPKLHQHLEDLDGGE 244 (383)
Q Consensus 216 ~~~~~~~~~lL~~~~P~L~~hL~~~~i~~ 244 (383)
......|+.||...||+|+..+...+-.+
T Consensus 21 ~~e~~~Fe~LL~~~D~dL~~W~~g~~~p~ 49 (72)
T PRK10878 21 DDEKRIFIRLLECDDPDLFNWLMNHGKPA 49 (72)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhCCCCCC
Confidence 34788999999999999999998765543
Done!