Query 016743
Match_columns 383
No_of_seqs 291 out of 1605
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 02:24:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016743.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016743hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 8.2E-64 1.8E-68 488.9 35.1 308 74-383 55-362 (365)
2 KOG0697 Protein phosphatase 1B 100.0 7.7E-56 1.7E-60 399.9 21.5 271 81-358 19-298 (379)
3 PTZ00224 protein phosphatase 2 100.0 1.9E-49 4.1E-54 389.1 32.2 258 81-358 19-278 (381)
4 KOG0698 Serine/threonine prote 100.0 1.6E-48 3.5E-53 378.9 28.9 264 83-359 38-312 (330)
5 PF00481 PP2C: Protein phospha 100.0 2.7E-48 5.8E-53 365.2 18.9 249 85-343 1-254 (254)
6 KOG0699 Serine/threonine prote 100.0 4.5E-48 9.7E-53 360.4 19.3 171 183-353 328-505 (542)
7 COG0631 PTC1 Serine/threonine 100.0 6.8E-46 1.5E-50 349.5 21.9 243 81-354 5-255 (262)
8 PRK14559 putative protein seri 100.0 7.4E-42 1.6E-46 352.9 26.4 268 70-356 361-640 (645)
9 cd00143 PP2Cc Serine/threonine 100.0 4.1E-39 9E-44 300.5 29.2 245 86-350 3-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 5.1E-39 1.1E-43 300.7 29.5 244 84-348 6-255 (255)
11 KOG0700 Protein phosphatase 2C 100.0 2E-37 4.4E-42 296.0 19.9 221 119-339 96-379 (390)
12 KOG1323 Serine/threonine phosp 100.0 5.9E-29 1.3E-33 230.5 20.8 235 119-356 141-492 (493)
13 KOG1379 Serine/threonine prote 99.9 7.8E-22 1.7E-26 183.4 21.3 208 96-350 89-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 2.4E-22 5.2E-27 208.1 15.0 243 83-352 521-773 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 3.6E-20 7.8E-25 169.0 15.6 182 88-317 2-195 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.7E-17 7.9E-22 147.0 20.9 175 96-335 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 4.6E-15 9.9E-20 158.6 21.9 193 92-350 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.6E-12 3.6E-17 116.4 20.2 178 120-351 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.5 2.8E-05 6E-10 77.1 21.2 176 120-351 173-366 (367)
20 PRK10693 response regulator of 73.8 23 0.00051 33.9 9.4 88 121-217 162-259 (303)
21 PRK15322 invasion protein OrgB 31.2 1.9E+02 0.0041 26.2 6.7 52 284-336 142-194 (210)
22 COG1539 FolB Dihydroneopterin 30.7 2.3E+02 0.005 23.4 6.8 62 295-358 43-106 (121)
23 cd00534 DHNA_DHNTPE Dihydroneo 26.4 2.7E+02 0.0059 22.4 6.6 60 295-356 42-103 (118)
24 COG3700 AphA Acid phosphatase 22.7 1.1E+02 0.0025 27.2 3.7 49 289-338 71-130 (237)
25 PF09436 DUF2016: Domain of un 20.9 60 0.0013 24.3 1.4 19 288-307 26-44 (72)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=8.2e-64 Score=488.94 Aligned_cols=308 Identities=61% Similarity=1.054 Sum_probs=275.6
Q ss_pred hhccccCCcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC
Q 016743 74 QNMLTNFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD 153 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~ 153 (383)
++....++|.++++++|++|.|+.|||++++..++...++..........||+|||||||+.+|++|++++++.|.+...
T Consensus 55 ~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~ 134 (365)
T PLN03145 55 ENMDTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED 134 (365)
T ss_pred ccchhhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc
Confidence 45566889999999999999999999999887665433333323334568999999999999999999999999988766
Q ss_pred CchhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHH
Q 016743 154 FPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERM 233 (383)
Q Consensus 154 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~ 233 (383)
++..+.++|.++|..+|..+.+.........||||++++++.++.+|+|||||||+|++++|.+++||+||+|.++.|+.
T Consensus 135 ~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~ 214 (365)
T PLN03145 135 FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERK 214 (365)
T ss_pred cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHH
Confidence 66678899999999999999876554444569999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHH
Q 016743 234 RIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFA 313 (383)
Q Consensus 234 Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v 313 (383)
||.+.||++..++++|.+.+||||||+.+|.++. ..+++++++|++..+++.++|.|||||||||||+|+++++++++
T Consensus 215 RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~--~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i 292 (365)
T PLN03145 215 RIEASGGYVYDGYLNGQLNVARALGDWHMEGMKG--SDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFA 292 (365)
T ss_pred HHHHcCCceecceECCcccccccccccccccccc--ccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHH
Confidence 9999999999999999999999999998886553 22345789999999999999999999999999999999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCChhhhccccccccChhhHHHhHhhhcC
Q 016743 314 RRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAAVQKAKVHRSISAEGLQNLRCLLEG 383 (383)
Q Consensus 314 ~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 383 (383)
+..+....+++++|+.|++.|+.+++.||+|||||+|+..++|.....|+++++++++++|++|+++|.+
T Consensus 293 ~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (365)
T PLN03145 293 RRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDS 362 (365)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhc
Confidence 8888777899999999999999999999999999999999999999999999999999999999999863
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-56 Score=399.85 Aligned_cols=271 Identities=35% Similarity=0.583 Sum_probs=248.6
Q ss_pred CcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCch----
Q 016743 81 VPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPL---- 156 (383)
Q Consensus 81 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~---- 156 (383)
-..++||..|+||||-.|||+|.+...+.. .-.+++||+|||||.|+..|.+|+++|.+.|.+...|..
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l~~-------~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~ 91 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGLPS-------PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKN 91 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcCCC-------CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccC
Confidence 346899999999999999999987766532 347899999999999999999999999999987655443
Q ss_pred ----hHHHHHHHHHHHHhHHHHhhhccccc-cCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHH
Q 016743 157 ----DIEKVVTRSFIETDAALLKSCSIESA-LSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKE 231 (383)
Q Consensus 157 ----~~~~~l~~a~~~~~~~i~~~~~~~~~-~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E 231 (383)
+.++-|+..|+++|+........... .++|||++++++....+|++|+||||++++|+|..+.-|.||+|..|.|
T Consensus 92 gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~E 171 (379)
T KOG0697|consen 92 GSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKE 171 (379)
T ss_pred CcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHH
Confidence 67889999999999988776544332 2599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHH
Q 016743 232 RMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVG 311 (383)
Q Consensus 232 ~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~ 311 (383)
++||+.+||.|.-.|++|.++++|||||++||.....++.+|.++++|+|..+.....|+|||||||||||+|+++|+.+
T Consensus 172 keRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelce 251 (379)
T KOG0697|consen 172 KERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCE 251 (379)
T ss_pred HHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCCh
Q 016743 312 FARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHA 358 (383)
Q Consensus 312 ~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~ 358 (383)
||+.++.-+.++..+|+.+++.++.+|++||+|+|+|.|...|.+..
T Consensus 252 fv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~ 298 (379)
T KOG0697|consen 252 FVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSI 298 (379)
T ss_pred HHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCH
Confidence 99999999999999999999999999999999999999998877654
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.9e-49 Score=389.10 Aligned_cols=258 Identities=27% Similarity=0.472 Sum_probs=221.3
Q ss_pred CcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHH
Q 016743 81 VPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEK 160 (383)
Q Consensus 81 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~ 160 (383)
...+.+|+.|++|+|++|||++++... ....+|+|||||||..+|+++++.|.+.+.+.... ...+
T Consensus 19 ~~~~~~g~~s~~G~R~~nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~--~~~~ 84 (381)
T PTZ00224 19 NSIFRCASACVNGYRESMEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP--MTDE 84 (381)
T ss_pred CccEEEEEEeCCCCCCCCCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc--ccHH
Confidence 445889999999999999999876532 34569999999999999999999999888543321 1245
Q ss_pred HHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe-CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcC
Q 016743 161 VVTRSFIETDAALLKSCSIESALSSGTTALTAMIF-GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLG 239 (383)
Q Consensus 161 ~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~-~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~g 239 (383)
.|+++|..+|+.|.+.. ..+|||+++++|. +..+++|||||||+|++|+|++++||+||+|.++.|+.||.+.|
T Consensus 85 ~l~~a~~~~d~~i~~~~-----~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~g 159 (381)
T PTZ00224 85 RMEELCLEIDEEWMDSG-----REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACG 159 (381)
T ss_pred HHHHHHHHHHHHHHhcc-----cCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHcc
Confidence 68899999999998542 2469999988886 57999999999999999999999999999999999999999999
Q ss_pred CeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccC-cCChHHHHHHHHHHHh
Q 016743 240 GYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWD-VFTSQNAVGFARRRLQ 318 (383)
Q Consensus 240 g~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd-~l~~~ei~~~v~~~l~ 318 (383)
|.+..+|++|.+++||+|||..+|.........+.++++|++..+++.++| ||||||||||| +++++++.+++...+.
T Consensus 160 g~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~ 238 (381)
T PTZ00224 160 GRVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLE 238 (381)
T ss_pred CEeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHh
Confidence 999999999999999999999887553222334557899999999999888 89999999999 7999999999987666
Q ss_pred ccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCCh
Q 016743 319 EHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHA 358 (383)
Q Consensus 319 ~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~ 358 (383)
...+++.+|+.|++.|+.+|+.||+|||||+|...+.+..
T Consensus 239 ~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~~~~ 278 (381)
T PTZ00224 239 TCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGASYAK 278 (381)
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCChhh
Confidence 6678999999999999999999999999999987764443
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=378.92 Aligned_cols=264 Identities=42% Similarity=0.693 Sum_probs=227.4
Q ss_pred ceeeee-eecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCch---hH
Q 016743 83 ALRSGE-WSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPL---DI 158 (383)
Q Consensus 83 ~~~~~~-~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~---~~ 158 (383)
.+..++ ++.+|+|..|||++.+...+.... ........||||||||||+.+|+|+.++|+..+.+...+.. ..
T Consensus 38 ~~~~~~~~~~~~~r~~med~~~~~~~~~~~~---~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~ 114 (330)
T KOG0698|consen 38 SYRLGSLLSIRGRRRKMEDRHVQLPDFLEED---VGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDV 114 (330)
T ss_pred cccceEEEecCCCCCccCcceeecccccccc---cCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHH
Confidence 344444 488888999999999887753211 11222689999999999999999999999999998776665 47
Q ss_pred HHHHHHHHH-HHhHHHHhhhccccccCCCceEEEEEEeCC-EEEEEEcCCceEEEEeCC-eeeecCCCCCCCChHHHHHH
Q 016743 159 EKVVTRSFI-ETDAALLKSCSIESALSSGTTALTAMIFGR-SLLVANAGDCRAVLSRRG-AAVELSEDHRPDCTKERMRI 235 (383)
Q Consensus 159 ~~~l~~a~~-~~~~~i~~~~~~~~~~~~GtT~~~~li~~~-~l~vanvGDSR~yl~r~g-~~~~LT~DH~~~~~~E~~Ri 235 (383)
+.+++++|. .+|..+.+. ......+|||++++++.++ ++|+||+||||+++++.| .+++||.||+|..+.|+.||
T Consensus 115 ~~a~~~~F~~~~D~~~~~~--~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI 192 (330)
T KOG0698|consen 115 KDALRRAFLTKTDSEFLEK--REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERI 192 (330)
T ss_pred HHHHHHHHHHHHHHHHHhh--ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHH
Confidence 899999999 699999875 1213468999998888855 999999999999999866 79999999999999999999
Q ss_pred HHcCCeeec----CcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHH
Q 016743 236 QSLGGYIDD----GYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVG 311 (383)
Q Consensus 236 ~~~gg~v~~----~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~ 311 (383)
+++||+|.. .|++|.++++|+|||..+|. ++++++|++....+...|+||||+||||||+++++|+++
T Consensus 193 ~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~--------~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~ 264 (330)
T KOG0698|consen 193 EAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS--------QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVD 264 (330)
T ss_pred HHcCCEEEEcCCcceEeceEEEeeecCCHHhcC--------CcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHH
Confidence 999999984 39999999999999998874 469999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCChh
Q 016743 312 FARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHAA 359 (383)
Q Consensus 312 ~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~~ 359 (383)
+|+..+.....+..++..|.+.|..+++.||||||||.|...+..+..
T Consensus 265 ~V~~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 265 LVRDELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred HHHHHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 999877667789999999999999999999999999999987654444
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.7e-48 Score=365.15 Aligned_cols=249 Identities=40% Similarity=0.684 Sum_probs=208.4
Q ss_pred eeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCch--hHHHHH
Q 016743 85 RSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPL--DIEKVV 162 (383)
Q Consensus 85 ~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~--~~~~~l 162 (383)
.+|+.+.+|+|..|||++++..++... .......+|+|||||||..+++++++.++..+.+...+.. .+.++|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-----~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al 75 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-----SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEAL 75 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-----TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-----CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcc
Confidence 368889999999999999999865311 2346789999999999999999999999988876543322 588999
Q ss_pred HHHHHH-HhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeee-ecCCCCCCCChHHHHHHHHcCC
Q 016743 163 TRSFIE-TDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAV-ELSEDHRPDCTKERMRIQSLGG 240 (383)
Q Consensus 163 ~~a~~~-~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~-~LT~DH~~~~~~E~~Ri~~~gg 240 (383)
..+|.. ++..+.+.........+|||+++++|.++++|+|||||||+|+++.+... +||+||+|..+.|+.||++.||
T Consensus 76 ~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg 155 (254)
T PF00481_consen 76 RQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGG 155 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-
T ss_pred cceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccc
Confidence 999999 88888873221134579999999999999999999999999999999888 9999999999999999999999
Q ss_pred eee-cCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHhc
Q 016743 241 YID-DGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQE 319 (383)
Q Consensus 241 ~v~-~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~ 319 (383)
.+. .+|+.|.+++||+|||..+|... .++++++|+|..+.+.++|.|||||||||||++++++++++++.....
T Consensus 156 ~v~~~~rv~g~l~~sRalGd~~~k~~~-----~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~ 230 (254)
T PF00481_consen 156 RVSENGRVNGVLAVSRALGDFDLKPPG-----KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNS 230 (254)
T ss_dssp GEEETEEETTTBSSSB-EE-GGGTTCT-----SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhccccccccccccccccc-----cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhc
Confidence 999 89999999999999999988522 346999999999999999999999999999999999999999988766
Q ss_pred cCCHHHHHHHHHHHHHHCCCCCce
Q 016743 320 HNDLKLCCKEMVKEAIKRGGTDNL 343 (383)
Q Consensus 320 ~~~~~~~a~~Lv~~A~~~g~~DNi 343 (383)
+.+|+.+|+.|+++|+++|+.|||
T Consensus 231 ~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 231 GRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCC
Confidence 667999999999999999999997
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-48 Score=360.40 Aligned_cols=171 Identities=40% Similarity=0.695 Sum_probs=164.0
Q ss_pred cCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeee-cCcccCcccccccccccc
Q 016743 183 LSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYID-DGYLNGQLGVTRALGDWH 261 (383)
Q Consensus 183 ~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~-~~~~~g~l~ltralGd~~ 261 (383)
..+|||++++++.+.++||||+||||++++|.|+++.||.||+|....|..||.++||.|. +||++|.+.++|||||+.
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhh
Confidence 3589999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred cccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHC----
Q 016743 262 LEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKR---- 337 (383)
Q Consensus 262 ~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~---- 337 (383)
||++..++..+|++++-|+|....|++.|+|+||+|||||.+|+.+++++||+..|.....+..+|++|++.++.-
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998889999999999999863
Q ss_pred --CCCCceeEEEEEccCC
Q 016743 338 --GGTDNLTIVMVSFHLE 353 (383)
Q Consensus 338 --g~~DNiTvIvv~l~~~ 353 (383)
-++||||||++.|++.
T Consensus 488 DGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFKRK 505 (542)
T ss_pred CCcCCCcceEEEEEeccc
Confidence 2689999999999843
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-46 Score=349.48 Aligned_cols=243 Identities=29% Similarity=0.460 Sum_probs=208.5
Q ss_pred CcceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC----c
Q 016743 81 VPALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF----P 155 (383)
Q Consensus 81 ~~~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~----~ 155 (383)
...+.+++.|+.|. |.+|||++.+..+.. ... ..||+||||||||+++++|++.+++.|.+.... .
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~--------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~ 75 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNEN--------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNS 75 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccC--------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccc
Confidence 34577889999998 999999999876311 223 679999999999999999999999988764321 1
Q ss_pred hh--HHHHHHHHHHHHhHHHHhhhcc-ccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHH
Q 016743 156 LD--IEKVVTRSFIETDAALLKSCSI-ESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKER 232 (383)
Q Consensus 156 ~~--~~~~l~~a~~~~~~~i~~~~~~-~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~ 232 (383)
.. +.++|.+++..+|..|...... .....||||++++++.++++|+|||||||+|++|+|.+++||.||++.+..|+
T Consensus 76 ~~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~ 155 (262)
T COG0631 76 LNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQ 155 (262)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHH
Confidence 11 6899999999999999987542 22347999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHH
Q 016743 233 MRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGF 312 (383)
Q Consensus 233 ~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~ 312 (383)
.|+...++....++.+ ++|||||+.. ..+|++....+.+++ |||||||||||.+++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~---~ltralG~~~--------------~~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~~i 217 (262)
T COG0631 156 RGIITPEEARSHPRRN---ALTRALGDFD--------------LLEPDITELELEPGD-FLLLCSDGLWDVVSDDEIVDI 217 (262)
T ss_pred hcCCCHHHHHhCccch---hhhhhcCCCc--------------ccceeEEEEEcCCCC-EEEEECCCCccCcCHHHHHHH
Confidence 9887777666665554 8999999873 279999999999995 899999999999999999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCC
Q 016743 313 ARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEP 354 (383)
Q Consensus 313 v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~ 354 (383)
++. ..+++++++.|++.|+.+|+.||+|+|+|++...+
T Consensus 218 l~~----~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 218 LKN----SETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred Hhc----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 764 57999999999999999999999999999998765
No 8
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=7.4e-42 Score=352.86 Aligned_cols=268 Identities=20% Similarity=0.249 Sum_probs=194.0
Q ss_pred HHHHhhccccCCcceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhH--
Q 016743 70 AERIQNMLTNFVPALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPR-- 146 (383)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~-- 146 (383)
.+..+..+++....++++++|++|. |++|||++.+...+...............+|+|||||||+.+|+.|++.+.+
T Consensus 361 ~~~~~~~lp~~l~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L 440 (645)
T PRK14559 361 EDAPTAVLPMQLVSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETL 440 (645)
T ss_pred ccCccccccccceeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHH
Confidence 3445556666777799999999997 9999999877543211000000011245699999999999876655555444
Q ss_pred --HHhhcCCCchhHHHHHHHHHHHHhHHHHhhhccc---cccCCCceEEEEEEeCCEEEEEEcCCceEEEE-eCCeeeec
Q 016743 147 --VIVEDADFPLDIEKVVTRSFIETDAALLKSCSIE---SALSSGTTALTAMIFGRSLLVANAGDCRAVLS-RRGAAVEL 220 (383)
Q Consensus 147 --~l~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~---~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~-r~g~~~~L 220 (383)
+|.+.........+.|+++|..+|..|.+..... ....||||++++++.++++|++||||||+|++ |+|++++|
T Consensus 441 ~~~~~~~~~~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QL 520 (645)
T PRK14559 441 QQYFQQHWQDELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQL 520 (645)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEe
Confidence 4433322112346789999999999998754332 23369999999999999999999999999998 57899999
Q ss_pred CCCCCCCChHHHHHHHHcCC--eeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecc
Q 016743 221 SEDHRPDCTKERMRIQSLGG--YIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSD 298 (383)
Q Consensus 221 T~DH~~~~~~E~~Ri~~~gg--~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SD 298 (383)
|+||++.... .+.|- ..... ..+...+|||||+...+ ..+|++..+.+.++| +||||||
T Consensus 521 T~DHs~~~~l-----v~~Gi~~~~a~~-~p~~~~LTrALG~~~~~------------~l~Pdi~~~~L~~gD-~lLLCSD 581 (645)
T PRK14559 521 TVDHEVGQRE-----IQRGVEPQIAYA-RPDAYQLTQALGPRDNS------------AIQPDIQFLEIEEDT-LLLLCSD 581 (645)
T ss_pred CCCCCHHHHH-----HHhCCCHHHHhc-CcccceeeeccCCCCCC------------cccceEEEEEcCCCC-EEEEECC
Confidence 9999975332 22230 00111 23567899999986432 358999999999887 6779999
Q ss_pred cccCc-CChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743 299 GIWDV-FTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP 356 (383)
Q Consensus 299 Glwd~-l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~ 356 (383)
||||. +.+..+.+.+...+....+++++|+.|++.|+.+|++||+|||||+++..|..
T Consensus 582 GL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~ 640 (645)
T PRK14559 582 GLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQL 640 (645)
T ss_pred CCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCC
Confidence 99995 34444444445556667789999999999999999999999999999876543
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.1e-39 Score=300.48 Aligned_cols=245 Identities=42% Similarity=0.705 Sum_probs=208.6
Q ss_pred eeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-----chhHHH
Q 016743 86 SGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-----PLDIEK 160 (383)
Q Consensus 86 ~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-----~~~~~~ 160 (383)
++..+..|.|..|||++++..... .....+|+|||||||+..+++|++.+.+.+.+.... ...+..
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~---------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~ 73 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLN---------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEE 73 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCC---------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHH
Confidence 466677778999999998865410 026789999999999999999999999988765432 346778
Q ss_pred HHHHHHHHHhHHHHhhhcc-ccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcC
Q 016743 161 VVTRSFIETDAALLKSCSI-ESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLG 239 (383)
Q Consensus 161 ~l~~a~~~~~~~i~~~~~~-~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~g 239 (383)
.|+++|..++..+...... .....+|||++++++.++.++++|+||||+|+++++.++++|.||++..+.|+.||...+
T Consensus 74 ~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~ 153 (254)
T cd00143 74 ALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAG 153 (254)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcC
Confidence 8999999999999876543 123469999999999999999999999999999999999999999999999999999999
Q ss_pred CeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEe-cCCCeEEEEecccccCcCChHHHHHHHHHHHh
Q 016743 240 GYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTL-TNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQ 318 (383)
Q Consensus 240 g~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l-~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~ 318 (383)
+++...+.++...+||+||+..+|. +...+|++....+ .++| +||||||||||++++++|.+++.....
T Consensus 154 ~~~~~~~~~~~~~~t~~lG~~~~~~---------~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~~~~ 223 (254)
T cd00143 154 GRVSNGRVPGVLAVTRALGDFDLKP---------GVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRSELA 223 (254)
T ss_pred CcEEeCEEcCceeeccccCCccccC---------CEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHHHhc
Confidence 9988788888999999999886652 3678999999999 6766 788999999999999999998765311
Q ss_pred ccCCHHHHHHHHHHHHHHCCCCCceeEEEEEc
Q 016743 319 EHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSF 350 (383)
Q Consensus 319 ~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l 350 (383)
. .+++++|+.|++.|..+++.||+|+|+++|
T Consensus 224 ~-~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 224 K-EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred c-cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 1 279999999999999999999999999975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.1e-39 Score=300.74 Aligned_cols=244 Identities=43% Similarity=0.744 Sum_probs=209.5
Q ss_pred eeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCc----hhHH
Q 016743 84 LRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFP----LDIE 159 (383)
Q Consensus 84 ~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~----~~~~ 159 (383)
+.++..+..|.|..|||++++.... .....+|+|||||||+.+|+++++.+...+.+..... ..+.
T Consensus 6 ~~~~~~~~~~~r~~neD~~~~~~~~----------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (255)
T smart00332 6 LRYGLSSMQGVRKPMEDAHVITPDL----------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVE 75 (255)
T ss_pred eeEEEecCCCCCCCCcceEEEeccC----------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Confidence 4556667777899999998876442 1467899999999999999999999999987654322 3578
Q ss_pred HHHHHHHHHHhHHHHhhhcccc-ccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016743 160 KVVTRSFIETDAALLKSCSIES-ALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSL 238 (383)
Q Consensus 160 ~~l~~a~~~~~~~i~~~~~~~~-~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~ 238 (383)
+.|.+++..++..+........ ...+|||++++++..+.++++|+||||+|++|++++.++|+||++....|+.||...
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~ 155 (255)
T smart00332 76 EALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAA 155 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHc
Confidence 8899999999999987654332 235999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEe-cCCCeEEEEecccccCcCChHHHHHHHHHHH
Q 016743 239 GGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTL-TNEDEFLIIGSDGIWDVFTSQNAVGFARRRL 317 (383)
Q Consensus 239 gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l-~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l 317 (383)
++.+..++.++...+||++|+..+|. .+..+|++...++ .++| +||||||||||+++++++.+++....
T Consensus 156 ~~~~~~~~~~~~~~lt~~~g~~~~~~---------~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~~~~~~ 225 (255)
T smart00332 156 GGFVINGRVNGVLALSRAIGDFFLKP---------YVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDIVRKHL 225 (255)
T ss_pred CCEEECCeECCeEecccccCCHhhcC---------CeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHHHHHHh
Confidence 99999999999999999999876652 4778999999997 6666 78899999999999999999987643
Q ss_pred hccCCHHHHHHHHHHHHHHCCCCCceeEEEE
Q 016743 318 QEHNDLKLCCKEMVKEAIKRGGTDNLTIVMV 348 (383)
Q Consensus 318 ~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv 348 (383)
.. .++.++|+.|++.|..+++.||+|+|||
T Consensus 226 ~~-~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 226 SK-SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred hc-CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 22 3799999999999999999999999985
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=296.03 Aligned_cols=221 Identities=30% Similarity=0.461 Sum_probs=185.0
Q ss_pred CCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC----------------------------------CCchhHHHHHHH
Q 016743 119 QEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA----------------------------------DFPLDIEKVVTR 164 (383)
Q Consensus 119 ~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~----------------------------------~~~~~~~~~l~~ 164 (383)
...+.|+||||||||..|++|.+++|..++..+. .+...+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 4788999999999999999999999999887210 113567899999
Q ss_pred HHHHHhHHHHhhhccc-----cccCCCceEEEEEEeCCEEEEEEcCCceEEEEe---CC---eeeecCCCCCCCChHHHH
Q 016743 165 SFIETDAALLKSCSIE-----SALSSGTTALTAMIFGRSLLVANAGDCRAVLSR---RG---AAVELSEDHRPDCTKERM 233 (383)
Q Consensus 165 a~~~~~~~i~~~~~~~-----~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r---~g---~~~~LT~DH~~~~~~E~~ 233 (383)
||.+++++|....... .-+-+|+|++++++.++.+||||+||||++|.+ ++ .++|||.||+..++.|+.
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 9999999997654322 123599999999999999999999999999964 23 578999999999999999
Q ss_pred HHHHcCC----eeec--CcccCccccccccccccccccccc------------CCCCCCceecceEEEEEecCCCeEEEE
Q 016743 234 RIQSLGG----YIDD--GYLNGQLGVTRALGDWHLEGMKEM------------GGRGGPLSAEPELKLVTLTNEDEFLII 295 (383)
Q Consensus 234 Ri~~~gg----~v~~--~~~~g~l~ltralGd~~~k~~~~~------------~~~~~~~~~~Pdi~~~~l~~~d~fLIL 295 (383)
||+...- .+.. +|+.|.+.+||||||..||..+.. ..+.|+++++|.|+.++|++.|+||||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 9999763 3333 599999999999999999976544 234678999999999999999999999
Q ss_pred ecccccCcCChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCC
Q 016743 296 GSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRGG 339 (383)
Q Consensus 296 ~SDGlwd~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~ 339 (383)
+|||||++|+++|++++|...+.....-+.+|+.||+.|+.+..
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAA 379 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhh
Confidence 99999999999999999998765433446789999999987543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-29 Score=230.50 Aligned_cols=235 Identities=28% Similarity=0.453 Sum_probs=185.7
Q ss_pred CCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC--------------------------------------C--chhH
Q 016743 119 QEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD--------------------------------------F--PLDI 158 (383)
Q Consensus 119 ~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~--------------------------------------~--~~~~ 158 (383)
..++.+|.+||||.|..+|-.|++.+++.+.+... . ..-+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 45688999999999999999999999888753110 0 0124
Q ss_pred HHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016743 159 EKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSL 238 (383)
Q Consensus 159 ~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~ 238 (383)
..+|+.||+.+|++|....+.. ...+|||+++++..-+++|+||+||||++++|+++++.||++.+| +.||+|++..
T Consensus 221 iGAlEsAFqemDeqiarer~~~-~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~L 297 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVW-RLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQEL 297 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHH
Confidence 5789999999999997654332 336999999999999999999999999999999999999999998 5789998875
Q ss_pred CCe--------ee-----------------------------------------------cCcccCcccccccccccccc
Q 016743 239 GGY--------ID-----------------------------------------------DGYLNGQLGVTRALGDWHLE 263 (383)
Q Consensus 239 gg~--------v~-----------------------------------------------~~~~~g~l~ltralGd~~~k 263 (383)
+-. .. ..|+.+.+.+||.|||+++|
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 411 00 11233356699999999999
Q ss_pred cccccCCCCCCceecceEEEEEecC----CCeEEEEecccccCcCChHHHHHHHHHHHhccC--CH---HHHHHHHHHHH
Q 016743 264 GMKEMGGRGGPLSAEPELKLVTLTN----EDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHN--DL---KLCCKEMVKEA 334 (383)
Q Consensus 264 ~~~~~~~~~~~~~~~Pdi~~~~l~~----~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~--~~---~~~a~~Lv~~A 334 (383)
-....-.-.+.+++.|+|.+.++.+ .|+.+||+||||||+++++++..+|+..+.... || -.+|+.|+..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 7776666778899999999998873 344899999999999999999999999876443 44 36778888877
Q ss_pred HH-------------CCCCCceeEEEEEccCCCCC
Q 016743 335 IK-------------RGGTDNLTIVMVSFHLEPPP 356 (383)
Q Consensus 335 ~~-------------~g~~DNiTvIvv~l~~~~~~ 356 (383)
.. .|+.|+|||.||-+.....|
T Consensus 458 rg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~~ 492 (493)
T KOG1323|consen 458 RGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAAP 492 (493)
T ss_pred cCccCCCceeccCCCcCCCCceEEEEEeccCCCCC
Confidence 52 25789999999998765443
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=7.8e-22 Score=183.39 Aligned_cols=208 Identities=20% Similarity=0.306 Sum_probs=146.6
Q ss_pred CCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchH-----HHHHHHHhhh---HHHhhcCCCchhHHHHHHHHHH
Q 016743 96 TYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNG-----AAHFVREHLP---RVIVEDADFPLDIEKVVTRSFI 167 (383)
Q Consensus 96 ~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~-----aa~~a~~~l~---~~l~~~~~~~~~~~~~l~~a~~ 167 (383)
..-||++++..+ ....+.|||||+|||+ .+.|..+.+. +.+.+....+.++...|.+++.
T Consensus 89 ~~GEDa~Fvss~------------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~ 156 (330)
T KOG1379|consen 89 KGGEDAWFVSSN------------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYA 156 (330)
T ss_pred CCCCcceeeccC------------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHH
Confidence 445899998865 5677999999999997 4555544442 2333333334477887877765
Q ss_pred HHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeecC
Q 016743 168 ETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDG 245 (383)
Q Consensus 168 ~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~ 245 (383)
++- +. +...-++||++++.+. +++||+||+|||-..++|+|+++.-|..+..
T Consensus 157 ~l~----~~---~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H------------------- 210 (330)
T KOG1379|consen 157 ELK----SQ---KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH------------------- 210 (330)
T ss_pred HHh----hc---CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee-------------------
Confidence 443 21 1112378899988888 8999999999999999999999998876531
Q ss_pred cccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHh-ccCCHH
Q 016743 246 YLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQ-EHNDLK 324 (383)
Q Consensus 246 ~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~-~~~~~~ 324 (383)
+.+-.+.|+. +...|.. .........+.+.+.+.++| +||||||||||++.+++|++++..... ...+++
T Consensus 211 ~FN~PyQLs~--~p~~~~~------~~~d~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq 281 (330)
T KOG1379|consen 211 YFNTPYQLSS--PPEGYSS------YISDVPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQ 281 (330)
T ss_pred ccCCceeecc--CCccccc------cccCCccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHH
Confidence 1222222221 1111100 00012345678899999999 688999999999999999999988665 556899
Q ss_pred HHHHHHHHHHHHC-----------------------CCCCceeEEEEEc
Q 016743 325 LCCKEMVKEAIKR-----------------------GGTDNLTIVMVSF 350 (383)
Q Consensus 325 ~~a~~Lv~~A~~~-----------------------g~~DNiTvIvv~l 350 (383)
..|+.+++.|.+. |..|+|||||..+
T Consensus 282 ~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 282 VTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 9999999998753 3489999998753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=2.4e-22 Score=208.15 Aligned_cols=243 Identities=25% Similarity=0.405 Sum_probs=203.6
Q ss_pred ceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHH
Q 016743 83 ALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVV 162 (383)
Q Consensus 83 ~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l 162 (383)
.+.+|++...|.|.++-=+.....++ .....+.|+++||-+......+...++..++.++.....+-.+.|
T Consensus 521 ~~t~Gv~~~~gqrnk~c~~~~~v~nf---------~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~m 591 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQRNKVCSRAVWVENF---------FLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQM 591 (1081)
T ss_pred heeeccchhcccccchhhhhhhhhhc---------ccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 36688888999988876554444333 235678999999999999999999999999988765554445569
Q ss_pred HHHHHHHhHHHHhhhccccccCCCceEEEEEEeC--------CEEEEEEcCCceEEEEeCCeeeecCCCC-CCCChHHHH
Q 016743 163 TRSFIETDAALLKSCSIESALSSGTTALTAMIFG--------RSLLVANAGDCRAVLSRRGAAVELSEDH-RPDCTKERM 233 (383)
Q Consensus 163 ~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~--------~~l~vanvGDSR~yl~r~g~~~~LT~DH-~~~~~~E~~ 233 (383)
+.+|...++++-...+ ..|..++.+.|.. ..+++||+|+|.++++++|+-.++|+-. ....++|.+
T Consensus 592 r~~fl~~~rklg~~g~-----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~ 666 (1081)
T KOG0618|consen 592 RNTFLRLNRKLGEEGQ-----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYK 666 (1081)
T ss_pred HHHHHHHhhhhhhhhc-----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHH
Confidence 9999999999965532 3455555555542 4789999999999999999988887765 444899999
Q ss_pred HHHHcCCeee-cCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHH
Q 016743 234 RIQSLGGYID-DGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGF 312 (383)
Q Consensus 234 Ri~~~gg~v~-~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~ 312 (383)
||...+|+|. +++++|....||++|.+.. .+.+.+.|+|....|++.|+|||+++-+||++|+-+++++.
T Consensus 667 RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l---------~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~ 737 (1081)
T KOG0618|consen 667 RIVDSKGFITEDNKLNGVTSSTRAIGPFSL---------FPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDA 737 (1081)
T ss_pred HHHHhcCeecCCCeeeceeeeeeecccccc---------cccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHH
Confidence 9999999999 8899999999999998743 33588999999999999999999999999999999999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccC
Q 016743 313 ARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHL 352 (383)
Q Consensus 313 v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~ 352 (383)
++ +..+|-.+|++|++.|...|+.||++|+||++..
T Consensus 738 vR----n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~ 773 (1081)
T KOG0618|consen 738 VR----NVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNH 773 (1081)
T ss_pred Hh----cCCchHHHHHHHHHHHHhcccccCeeEEEEEeec
Confidence 77 4579999999999999999999999999999864
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.84 E-value=3.6e-20 Score=169.01 Aligned_cols=182 Identities=23% Similarity=0.242 Sum_probs=98.9
Q ss_pred eeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHH----HHHHHHhhhHHHhhcCCCchh--HHHH
Q 016743 88 EWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGA----AHFVREHLPRVIVEDADFPLD--IEKV 161 (383)
Q Consensus 88 ~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~a----a~~a~~~l~~~l~~~~~~~~~--~~~~ 161 (383)
+.+++|.|..|||++.+... .+..+++||||+||... |+++++.+..++.+....... .+..
T Consensus 2 G~sh~~~~~~nqD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~ 69 (212)
T PF13672_consen 2 GRSHRGRGAPNQDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEAL 69 (212)
T ss_dssp -----TTSSS--EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CccccCCCCCCCCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 35789999999999985543 45567799999997765 455555555566555443332 2233
Q ss_pred HHHHHHHHhHHH----HhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEE-EeCCeeeecCCCCCCCChHHHHHHH
Q 016743 162 VTRSFIETDAAL----LKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVL-SRRGAAVELSEDHRPDCTKERMRIQ 236 (383)
Q Consensus 162 l~~a~~~~~~~i----~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl-~r~g~~~~LT~DH~~~~~~E~~Ri~ 236 (383)
++.+...+...+ ...........++||++++++.++.++++|+||||+|+ .++|.+..++.||+. |..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~~-- 143 (212)
T PF13672_consen 70 IRAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYPN-- 143 (212)
T ss_dssp HHHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHHH--
T ss_pred HHHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhhh--
Confidence 333333333221 01111222336899999999999999999999999965 589999999999962 1110
Q ss_pred HcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHH-HHHHHHH
Q 016743 237 SLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQN-AVGFARR 315 (383)
Q Consensus 237 ~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~e-i~~~v~~ 315 (383)
.++.+.... .....++..+++.+++. |+|||||||+.+...+ +..++.+
T Consensus 144 ----------------~~~~~~~~~-------------~~~~~~~~~~~~~~~d~-ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 144 ----------------QTRSLTGDD-------------PEPDVQYGSIPLEEGDV-ILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ----------------CTTSCCHHC-------------CCTETEEEEEE--TT-E-EEEE-HHHHTTS-HHHHHHHH---
T ss_pred ----------------hhhccCccc-------------cccCCeEEEEEcCCCCE-EEEECcCccccCCCHHHHHHHhhh
Confidence 133333221 12233666777888885 6699999999998655 6666655
Q ss_pred HH
Q 016743 316 RL 317 (383)
Q Consensus 316 ~l 317 (383)
.+
T Consensus 194 ~~ 195 (212)
T PF13672_consen 194 LW 195 (212)
T ss_dssp --
T ss_pred cc
Confidence 43
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.78 E-value=3.7e-17 Score=146.97 Aligned_cols=175 Identities=18% Similarity=0.145 Sum_probs=130.6
Q ss_pred CCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHHHHHHHHHhHHHHh
Q 016743 96 TYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLK 175 (383)
Q Consensus 96 ~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~a~~~~~~~i~~ 175 (383)
...-|.+.+... ..+..+|+|+||||+..+|.+++..+...|.+...... .+.+.+..+|+.+..
T Consensus 15 ~~~GD~~~~~~~-----------~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~ 79 (193)
T smart00331 15 QVGGDFYDVVKL-----------PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYE 79 (193)
T ss_pred hcCccEEEEEEe-----------CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHh
Confidence 455688876654 24478999999999988888888888888865443222 245566777888766
Q ss_pred hhccccccCCCceEEEEEE--eCCEEEEEEcCCceEEEEe-CCeeeecCCCCCCCChHHHHHHHHcCCeeecCcccCccc
Q 016743 176 SCSIESALSSGTTALTAMI--FGRSLLVANAGDCRAVLSR-RGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLG 252 (383)
Q Consensus 176 ~~~~~~~~~~GtT~~~~li--~~~~l~vanvGDSR~yl~r-~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ 252 (383)
.. ...+|+|++++++ ..++++++|+||+|+|+++ ++...+++.+.
T Consensus 80 ~~----~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~---------------------------- 127 (193)
T smart00331 80 NG----EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL---------------------------- 127 (193)
T ss_pred cC----CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC----------------------------
Confidence 41 2358999999998 5789999999999999998 66666665543
Q ss_pred ccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHhccCCHHHHHHHHHH
Q 016743 253 VTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVK 332 (383)
Q Consensus 253 ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~ 332 (383)
++.+|.. ...++++..+.+.++| .|+|+|||||+.+..+++.+++.+.. ..+++++++++++
T Consensus 128 -~~~lG~~--------------~~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~ 189 (193)
T smart00331 128 -GAPLGLE--------------PDVEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILE 189 (193)
T ss_pred -CceeeeC--------------CCCcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHH
Confidence 3457743 1234677888999999 57799999999999998888877642 3568888888887
Q ss_pred HHH
Q 016743 333 EAI 335 (383)
Q Consensus 333 ~A~ 335 (383)
.+.
T Consensus 190 ~~~ 192 (193)
T smart00331 190 ELL 192 (193)
T ss_pred HHh
Confidence 654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.67 E-value=4.6e-15 Score=158.61 Aligned_cols=193 Identities=15% Similarity=0.106 Sum_probs=137.3
Q ss_pred ccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHHHHHHHHHhH
Q 016743 92 IGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDA 171 (383)
Q Consensus 92 ~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~a~~~~~~ 171 (383)
++.+..+.|.+.+... .++..+++|+||+|+...|..++..+.+.+.+......++ ..++..+|.
T Consensus 561 k~g~~vsGD~y~~~~l-----------~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~----~~ai~~lN~ 625 (764)
T TIGR02865 561 KDGELVSGDSYSFGKL-----------SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDR----EVAIKTVNS 625 (764)
T ss_pred CCCCcccCceEEEEEE-----------CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCH----HHHHHHHHH
Confidence 4446788999887654 2456789999999966666666666655554322111122 456677787
Q ss_pred HHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeecCcccC
Q 016743 172 ALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNG 249 (383)
Q Consensus 172 ~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g 249 (383)
.+.... ...+.+|+..++++ .+.+.++|+|+++.|+.|++.+.+++..+-|
T Consensus 626 ~L~~~~----~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP----------------------- 678 (764)
T TIGR02865 626 ILSLRS----TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP----------------------- 678 (764)
T ss_pred HHHhCC----CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce-----------------------
Confidence 775431 12478999999996 7899999999999999999998888765533
Q ss_pred cccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHH-----HHHHHHHHHhccCCHH
Q 016743 250 QLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQN-----AVGFARRRLQEHNDLK 324 (383)
Q Consensus 250 ~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~e-----i~~~v~~~l~~~~~~~ 324 (383)
+|-. ...+++....++.++| +|+|+|||+||..++.+ +.+++... ...+|+
T Consensus 679 -------lGil--------------~~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ 734 (764)
T TIGR02865 679 -------IGIL--------------DEVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPE 734 (764)
T ss_pred -------eEec--------------cCCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHHHhc--CCCCHH
Confidence 3421 1235667788999999 68899999999876533 44443321 345899
Q ss_pred HHHHHHHHHHHHCC---CCCceeEEEEEc
Q 016743 325 LCCKEMVKEAIKRG---GTDNLTIVMVSF 350 (383)
Q Consensus 325 ~~a~~Lv~~A~~~g---~~DNiTvIvv~l 350 (383)
+.++.|++.+.+.. ..||+|++++++
T Consensus 735 ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 735 EIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 99999999998643 379999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.52 E-value=1.6e-12 Score=116.43 Aligned_cols=178 Identities=19% Similarity=0.181 Sum_probs=115.9
Q ss_pred CceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CC
Q 016743 120 EAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIF--GR 197 (383)
Q Consensus 120 ~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~ 197 (383)
++..+++|+|++|..-.|.+.+..+...+......... ..+.+..+|+.+....... ..++|++++.++ .+
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~---~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD---NRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT---STTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc---cccceEEEEEecccce
Confidence 45679999999995555555555555555432211122 3456667777775543221 378899988877 67
Q ss_pred EEEEEEcCCceEEEEeC--CeeeecCCCCCCCChHHHHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCc
Q 016743 198 SLLVANAGDCRAVLSRR--GAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPL 275 (383)
Q Consensus 198 ~l~vanvGDSR~yl~r~--g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~ 275 (383)
.++++|+|++++++++. +....+..... .+|-. .
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~------------------------------~lG~~--------------~ 110 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREIEQLESEGP------------------------------PLGIF--------------E 110 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEEEEETCSSB------------------------------BCSSS--------------C
T ss_pred EEEEeCCCCCCEEEEeccccceeecccCcc------------------------------ceeee--------------c
Confidence 89999999999999998 34444433221 25532 1
Q ss_pred eecceEEEEEecCCCeEEEEecccccCcCChHH-------HHHHHHHHHhccCCHHHHHHHHHHHHHHC---CCCCceeE
Q 016743 276 SAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQN-------AVGFARRRLQEHNDLKLCCKEMVKEAIKR---GGTDNLTI 345 (383)
Q Consensus 276 ~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~e-------i~~~v~~~l~~~~~~~~~a~~Lv~~A~~~---g~~DNiTv 345 (383)
...+....+.+.++| .|+|+||||+|....+. +.+++... ...++++.++.|++.+... ...||+|+
T Consensus 111 ~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tv 187 (193)
T PF07228_consen 111 DIDYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRDDITV 187 (193)
T ss_dssp TTCEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEE
T ss_pred cccccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 234556678888999 57799999999984442 33333321 3467999999999988873 47899999
Q ss_pred EEEEcc
Q 016743 346 VMVSFH 351 (383)
Q Consensus 346 Ivv~l~ 351 (383)
++++++
T Consensus 188 l~~~~~ 193 (193)
T PF07228_consen 188 LVIRRQ 193 (193)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.47 E-value=2.8e-05 Score=77.15 Aligned_cols=176 Identities=16% Similarity=0.139 Sum_probs=114.8
Q ss_pred CceEEEEEecCCC-chHHHHHHHHhhhHHHhhcCCC-chhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--
Q 016743 120 EAISFYGVFDGHG-GNGAAHFVREHLPRVIVEDADF-PLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIF-- 195 (383)
Q Consensus 120 ~~~~l~~V~DGhG-G~~aa~~a~~~l~~~l~~~~~~-~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~-- 195 (383)
.....++|.|.+| |-.||-. .......+...... ..++. ..+..+|+.+...... .+-+|+...+++
T Consensus 173 ~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~----~~l~~~n~~~~~~~~~----~~f~T~~~~~~d~~ 243 (367)
T COG2208 173 EKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPA----DVLETLNRVLKQNLEE----DMFVTLFLGVYDLD 243 (367)
T ss_pred CcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHH----HHHHHHHHHHHhcccC----CcEEEEEEEEEecc
Confidence 3678899999999 6555544 22222222111111 12233 3455566666554221 277888888887
Q ss_pred CCEEEEEEcCCceEEEEeCCee---eecCCCCCCCChHHHHHHHHcCCeeecCcccCcccccccccccccccccccCCCC
Q 016743 196 GRSLLVANAGDCRAVLSRRGAA---VELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRG 272 (383)
Q Consensus 196 ~~~l~vanvGDSR~yl~r~g~~---~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~ 272 (383)
.+.+.++++|=--.++++.++. ..++. ...++|..
T Consensus 244 ~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~------------------------------~g~piG~~------------ 281 (367)
T COG2208 244 SGELTYSNAGHEPALILSADGEIEVEDLTA------------------------------LGLPIGLL------------ 281 (367)
T ss_pred CCEEEEeeCCCCCeeEEEcCCCceeEEccC------------------------------CCceeeec------------
Confidence 6799999999988888877543 22221 23456643
Q ss_pred CCceecceEEEEEecCCCeEEEEecccccC-------cCChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHC----CCCC
Q 016743 273 GPLSAEPELKLVTLTNEDEFLIIGSDGIWD-------VFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKR----GGTD 341 (383)
Q Consensus 273 ~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd-------~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~----g~~D 341 (383)
....+.+....+.+|| .|+|.|||+.+ .+..+...+++.. ....+++++++.+.+...+. .-.|
T Consensus 282 --~~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~~~D 356 (367)
T COG2208 282 --PDYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQIQDD 356 (367)
T ss_pred --CCccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCccccC
Confidence 2446667788888988 68899999999 4666667777654 24568888888888877653 3468
Q ss_pred ceeEEEEEcc
Q 016743 342 NLTIVMVSFH 351 (383)
Q Consensus 342 NiTvIvv~l~ 351 (383)
++|+++++++
T Consensus 357 DiTll~lk~~ 366 (367)
T COG2208 357 DITLLVLKVK 366 (367)
T ss_pred ceEEEEEEec
Confidence 8999999985
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=73.78 E-value=23 Score=33.90 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=49.1
Q ss_pred ceEEEEEec--CCCchHH-HHHHHHh-hhHHHhhcC----CCchhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEE
Q 016743 121 AISFYGVFD--GHGGNGA-AHFVREH-LPRVIVEDA----DFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTA 192 (383)
Q Consensus 121 ~~~l~~V~D--GhGG~~a-a~~a~~~-l~~~l~~~~----~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~ 192 (383)
+...|.++| ||||+.+ +.+.... +...+.... ....++ .+.+..+|+.+..... ...-|++.+
T Consensus 162 ~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p----~~~l~~lN~~l~~~~~-----~~~~t~~~~ 232 (303)
T PRK10693 162 NDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPEL----GALLKQVNHLLRQANL-----PGQFPLLVG 232 (303)
T ss_pred CcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCH----HHHHHHHHHHHHhcCC-----CceeeEEEE
Confidence 344455555 8877763 3333334 333443321 101122 4456677887766521 112588887
Q ss_pred EEe--CCEEEEEEcCCceEEEEeCCee
Q 016743 193 MIF--GRSLLVANAGDCRAVLSRRGAA 217 (383)
Q Consensus 193 li~--~~~l~vanvGDSR~yl~r~g~~ 217 (383)
+++ .+.+.++++|-...++..++..
T Consensus 233 ~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 233 YYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred EEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 887 5689999999999885433433
No 21
>PRK15322 invasion protein OrgB; Provisional
Probab=31.21 E-value=1.9e+02 Score=26.24 Aligned_cols=52 Identities=21% Similarity=0.362 Sum_probs=40.2
Q ss_pred EEecCCCeEEEEecccccCcCChHHHHHHHHHHHhccCC-HHHHHHHHHHHHHH
Q 016743 284 VTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHND-LKLCCKEMVKEAIK 336 (383)
Q Consensus 284 ~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~~-~~~~a~~Lv~~A~~ 336 (383)
+...++..|| +|||---=.|++++.++.....+....+ ....|+.|-+.+++
T Consensus 142 i~yhd~~rFV-~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~~~r~ls~~~l~ 194 (210)
T PRK15322 142 LKYHQEQRFI-MSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAIN 194 (210)
T ss_pred EEEcCCCceE-EEeCCchhccCHHHHHHHHHHHHHhCccchHHHHHHHhHHHHH
Confidence 4445666677 6888887889999999988877766655 88889888887765
No 22
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=30.71 E-value=2.3e+02 Score=23.36 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=47.8
Q ss_pred EecccccCcCChHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCCh
Q 016743 295 IGSDGIWDVFTSQNAVGFARRRLQEHN--DLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHA 358 (383)
Q Consensus 295 L~SDGlwd~l~~~ei~~~v~~~l~~~~--~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~ 358 (383)
..||=+-|.+...++.+.+...+.... -++..|+.+.+..+.+- ..++.+=|.+.+..+|.+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~ap~~ 106 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKVTKPKAPIP 106 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCCCCC
Confidence 468889999999999999988776443 46788888888877643 778888788877655544
No 23
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=26.37 E-value=2.7e+02 Score=22.37 Aligned_cols=60 Identities=10% Similarity=0.168 Sum_probs=42.9
Q ss_pred EecccccCcCChHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743 295 IGSDGIWDVFTSQNAVGFARRRLQE--HNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP 356 (383)
Q Consensus 295 L~SDGlwd~l~~~ei~~~v~~~l~~--~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~ 356 (383)
-.||-|-+.++...+.+.+...+.. ...++..|+.+.+..+.. .+.+.-+-|++.+..+|
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~--~~~v~~v~v~v~K~~~~ 103 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLED--YPKVSAIKVKVEKPNAP 103 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHh--CCCceEEEEEEECCCCC
Confidence 3688888899999999998886653 336788899999988865 24455555666554433
No 24
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=22.72 E-value=1.1e+02 Score=27.20 Aligned_cols=49 Identities=18% Similarity=0.334 Sum_probs=32.0
Q ss_pred CCeEEEEecccccC-----------cCChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHCC
Q 016743 289 EDEFLIIGSDGIWD-----------VFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRG 338 (383)
Q Consensus 289 ~d~fLIL~SDGlwd-----------~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g 338 (383)
+|. ++..|.|+|- +|.++..-+.+.....+..-|++.|..|+++-..||
T Consensus 71 DDT-vLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDT-VLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCe-eEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 354 5578888884 444554444443333333458999999999988876
No 25
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=20.87 E-value=60 Score=24.28 Aligned_cols=19 Identities=16% Similarity=0.366 Sum_probs=13.5
Q ss_pred CCCeEEEEecccccCcCChH
Q 016743 288 NEDEFLIIGSDGIWDVFTSQ 307 (383)
Q Consensus 288 ~~d~fLIL~SDGlwd~l~~~ 307 (383)
.|.+ +++++||+|=.+...
T Consensus 26 ~G~R-llva~nGv~lEv~r~ 44 (72)
T PF09436_consen 26 PGHR-LLVASNGVFLEVRRP 44 (72)
T ss_pred CCcE-EEEecCcEEEEEech
Confidence 5665 558999999765443
Done!