Query         016743
Match_columns 383
No_of_seqs    291 out of 1605
Neff          7.9 
Searched_HMMs 29240
Date          Mon Mar 25 03:03:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016743hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2p8e_A PPM1B beta isoform vari 100.0 1.6E-53 5.5E-58  409.9  28.9  266   82-354    22-301 (307)
  2 2i0o_A Ser/Thr phosphatase; be 100.0 1.9E-53 6.6E-58  408.7  25.0  261   81-351    20-304 (304)
  3 1a6q_A Phosphatase 2C; catalyt 100.0 2.9E-52   1E-56  412.0  27.8  270   82-358    20-299 (382)
  4 2iq1_A Protein phosphatase 2C  100.0 5.3E-51 1.8E-55  386.2  28.2  254   79-355     3-266 (274)
  5 3qn1_B Protein phosphatase 2C  100.0 3.6E-51 1.2E-55  398.4  26.2  262   86-356    16-333 (337)
  6 2i44_A Serine-threonine phosph 100.0 1.9E-50 6.4E-55  391.1  26.2  265   82-353    20-323 (324)
  7 2isn_A NYSGXRC-8828Z, phosphat 100.0 5.6E-50 1.9E-54  393.5  29.0  261   84-358    13-340 (364)
  8 3kdj_B Protein phosphatase 2C  100.0 2.4E-50   8E-55  389.3  23.7  261   84-357     9-311 (316)
  9 2irm_A Mitogen-activated prote 100.0 1.4E-49 4.9E-54  390.2  23.4  252   89-352    25-357 (358)
 10 3d8k_A PP2C, protein phosphata 100.0 1.3E-49 4.5E-54  392.2  22.5  255   84-355    13-328 (377)
 11 2j4o_A Mitogen-activated prote 100.0 3.9E-49 1.3E-53  392.3  23.7  262   81-353    24-368 (401)
 12 4da1_A Protein phosphatase 1K, 100.0 1.7E-48 5.9E-53  386.4  28.2  251   83-356   121-381 (389)
 13 2pnq_A [pyruvate dehydrogenase 100.0 1.2E-47 3.9E-52  387.7  22.8  259   84-352    37-456 (467)
 14 2pk0_A Serine/threonine protei 100.0 2.2E-43 7.6E-48  328.7  24.4  236   83-353     5-248 (250)
 15 1txo_A Putative bacterial enzy 100.0 9.1E-42 3.1E-46  315.4  24.5  228   83-352     4-237 (237)
 16 2j82_A TPPHA, protein serine-t 100.0   1E-41 3.5E-46  315.4  23.0  229   84-350     1-240 (240)
 17 2jfr_A Ser-Thr phosphatase MSP 100.0 5.7E-40   2E-44  302.7  22.9  221   83-350     5-233 (234)
 18 3rnr_A Stage II sporulation E  100.0 7.1E-37 2.4E-41  278.4  13.5  197  120-350     8-211 (211)
 19 3t91_A Stage II sporulation pr  99.9 3.1E-22   1E-26  185.1  16.5  208   83-356     7-225 (242)
 20 3pu9_A Protein serine/threonin  99.9 4.9E-20 1.7E-24  170.6  23.9  204   84-355    11-228 (242)
 21 3zt9_A Serine phosphatase; hyd  99.8 2.6E-17 8.9E-22  147.1  21.4  188   83-349     3-193 (193)
 22 3f79_A Probable two-component   99.8 1.6E-17 5.6E-22  154.5  18.4  204   82-351    36-253 (255)
 23 3ke6_A Protein RV1364C/MT1410;  99.3   2E-10 6.8E-15  113.6  24.7  206   81-353    33-259 (399)
 24 3eq2_A Probable two-component   98.6 5.5E-07 1.9E-11   88.2  13.9  171  120-351   201-392 (394)
 25 3c4z_A Rhodopsin kinase; Ser/T  40.8    0.89   3E-05   46.1  -6.0   80  253-350    44-134 (543)
 26 1nbu_A DHNA, probable dihydron  36.1 1.1E+02  0.0039   23.7   7.1   58  296-356    44-103 (119)
 27 3v9o_A Dihydroneopterin aldola  27.4 1.5E+02  0.0053   23.8   6.6   58  296-356    65-124 (143)
 28 1z9w_A DHNA, dihydroneopterin   26.7 1.2E+02  0.0041   24.1   5.7   58  296-356    44-103 (133)
 29 2krx_A ASL3597 protein; struct  26.3 1.3E+02  0.0045   22.6   5.4   49  288-336     8-68  (94)
 30 3r2e_A Dihydroneopterin aldola  25.6 1.4E+02  0.0049   24.1   6.1   58  296-356    67-126 (143)
 31 1dhn_A DHNA, 7,8-dihydroneopte  24.5 1.9E+02  0.0066   22.4   6.5   59  296-356    44-104 (121)
 32 1b9l_A Protein (epimerase); is  23.8 1.2E+02  0.0041   23.5   5.2   58  296-356    47-106 (120)
 33 2o90_A DHNA, dihydroneopterin   22.1 1.7E+02  0.0058   22.7   5.8   58  296-356    43-102 (122)
 34 1sql_A Dihydroneopterin aldola  20.8   2E+02  0.0069   23.2   6.1   59  296-356    63-123 (146)

No 1  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=1.6e-53  Score=409.90  Aligned_cols=266  Identities=34%  Similarity=0.570  Sum_probs=230.6

Q ss_pred             cceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-------
Q 016743           82 PALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-------  154 (383)
Q Consensus        82 ~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-------  154 (383)
                      ..++++.+|++|+|..|||++++...+..       ......+|+|||||||+.+|++|++.+++.|.+...+       
T Consensus        22 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~-------~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~   94 (307)
T 2p8e_A           22 NGLRYGLSSMQGWRVEMEDAHTAVVGIPH-------GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSG   94 (307)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT-------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC------
T ss_pred             CCeeEEEEecCCCCCcccceEEEEecCCC-------CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccc
Confidence            46899999999999999999988765320       1135789999999999999999999999999763322       


Q ss_pred             ------chhHHHHHHHHHHHHhHHHHhhhccc-cccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCC
Q 016743          155 ------PLDIEKVVTRSFIETDAALLKSCSIE-SALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPD  227 (383)
Q Consensus       155 ------~~~~~~~l~~a~~~~~~~i~~~~~~~-~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~  227 (383)
                            ...+.++|.++|..+|+.|.+..... ....+|||++++++.++++|+|||||||+|++|+|++++||+||+|.
T Consensus        95 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~  174 (307)
T 2p8e_A           95 SALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPC  174 (307)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTT
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCC
Confidence                  23568899999999999998764322 23469999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChH
Q 016743          228 CTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQ  307 (383)
Q Consensus       228 ~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~  307 (383)
                      .+.|+.||...||.+..+|++|.+.+||||||..+|.....+...+.+.++|++..+++.++|+|||||||||||+++++
T Consensus       175 ~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~  254 (307)
T 2p8e_A          175 NPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNE  254 (307)
T ss_dssp             SHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred             CHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHH
Confidence            99999999999999999999999999999999998876554444566789999999999999889999999999999999


Q ss_pred             HHHHHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCC
Q 016743          308 NAVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEP  354 (383)
Q Consensus       308 ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~  354 (383)
                      ++++++...+....+++++|+.|++.|+.+|+.||+|||||++...+
T Consensus       255 ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          255 ELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence            99999988766677999999999999999999999999999997643


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=1.9e-53  Score=408.74  Aligned_cols=261  Identities=37%  Similarity=0.633  Sum_probs=223.3

Q ss_pred             CcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-chhHH
Q 016743           81 VPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-PLDIE  159 (383)
Q Consensus        81 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-~~~~~  159 (383)
                      ...+.+|.+|++|+|..|||++++...+.          ....+|+|||||||+.+|++|++.+++.|.+...+ ..++.
T Consensus        20 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~----------~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~   89 (304)
T 2i0o_A           20 NEFLASGSSSMQGWRISQEDAHNCILNFD----------DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFE   89 (304)
T ss_dssp             CSSEEEEEEEEEESSSCCCEEEEEEEEEE----------TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHH
T ss_pred             CCceEEEEeecCCCCCCccCEEEEEeccC----------CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHH
Confidence            45689999999999999999998875432          46789999999999999999999999999764322 23578


Q ss_pred             HHHHHHHHHHhHHHHhhhc---------------cccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCC
Q 016743          160 KVVTRSFIETDAALLKSCS---------------IESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDH  224 (383)
Q Consensus       160 ~~l~~a~~~~~~~i~~~~~---------------~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH  224 (383)
                      ++|+++|..+|+.|.+...               ......+|||++++++.++.+|+|||||||+|++|+|++++||+||
T Consensus        90 ~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH  169 (304)
T 2i0o_A           90 KALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDH  169 (304)
T ss_dssp             HHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCc
Confidence            8999999999998865321               1123469999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHcCCeee-cCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCc
Q 016743          225 RPDCTKERMRIQSLGGYID-DGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDV  303 (383)
Q Consensus       225 ~~~~~~E~~Ri~~~gg~v~-~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~  303 (383)
                      +|..+.|+.||...||++. .+|++|.+.+|||||+..+|....++...++++++|++..+++.++|.|||||||||||+
T Consensus       170 ~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~  249 (304)
T 2i0o_A          170 KPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNF  249 (304)
T ss_dssp             CTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTT
T ss_pred             CCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCcccc
Confidence            9999999999999999998 789999999999999998886655444456678999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHH------CCCCCceeEEEEEcc
Q 016743          304 FTSQNAVGFARRRLQE-HNDLKLCCKEMVKEAIK------RGGTDNLTIVMVSFH  351 (383)
Q Consensus       304 l~~~ei~~~v~~~l~~-~~~~~~~a~~Lv~~A~~------~g~~DNiTvIvv~l~  351 (383)
                      +++++++++++..+.. ..+++++|+.|++.|+.      .++.||+|||||+|+
T Consensus       250 l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          250 MTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             CCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence            9999999999886655 67899999999999986      458999999999985


No 3  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=2.9e-52  Score=412.04  Aligned_cols=270  Identities=32%  Similarity=0.541  Sum_probs=235.9

Q ss_pred             cceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC--------C
Q 016743           82 PALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA--------D  153 (383)
Q Consensus        82 ~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~--------~  153 (383)
                      ..++++.+|++|+|..|||++++...+..       ......+|+|||||||+.+|++|++.+++.|....        .
T Consensus        20 ~~l~~g~~s~~G~R~~nEDa~~~~~~~~~-------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~   92 (382)
T 1a6q_A           20 NGLRYGLSSMQGWRVEMEDAHTAVIGLPS-------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP   92 (382)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT-------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSC
T ss_pred             CceEEEEEecCCCCCCCCceeEEecCCCC-------CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCC
Confidence            46899999999999999999998765321       11356899999999999999999999999886421        1


Q ss_pred             CchhHHHHHHHHHHHHhHHHHhhhccc-cccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHH
Q 016743          154 FPLDIEKVVTRSFIETDAALLKSCSIE-SALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKER  232 (383)
Q Consensus       154 ~~~~~~~~l~~a~~~~~~~i~~~~~~~-~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~  232 (383)
                      ....+.++|+++|..+|+.|.+..... ....+|||++++++.++.+|+|||||||+|++|+|.+++||+||+|..+.|+
T Consensus        93 ~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~  172 (382)
T 1a6q_A           93 SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEK  172 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHH
Confidence            234578899999999999998764322 2336999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEec-CCCeEEEEecccccCcCChHHHHH
Q 016743          233 MRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLT-NEDEFLIIGSDGIWDVFTSQNAVG  311 (383)
Q Consensus       233 ~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~-~~d~fLIL~SDGlwd~l~~~ei~~  311 (383)
                      .||..+||.+..+|++|.+++||||||+.+|.....++..+.++++|++..+++. ++|+|||||||||||+++++++++
T Consensus       173 ~RI~~~gg~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~  252 (382)
T 1a6q_A          173 ERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCD  252 (382)
T ss_dssp             HHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHH
T ss_pred             HHHHhcCcEEecccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHH
Confidence            9999999999999999999999999999998765555555668899999999999 777899999999999999999999


Q ss_pred             HHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCCh
Q 016743          312 FARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPHA  358 (383)
Q Consensus       312 ~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~~  358 (383)
                      +++..+....+++.+|+.|++.|+.+|+.||+|||||+|...|.+..
T Consensus       253 ~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~~  299 (382)
T 1a6q_A          253 FVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSP  299 (382)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCCCCH
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCCCCh
Confidence            99887666789999999999999999999999999999987766543


No 4  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=5.3e-51  Score=386.19  Aligned_cols=254  Identities=33%  Similarity=0.513  Sum_probs=218.8

Q ss_pred             cCCcceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhH
Q 016743           79 NFVPALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDI  158 (383)
Q Consensus        79 ~~~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~  158 (383)
                      ..++.+.+|.+|++|+|+.|||++++...           .....+|+|||||||+.+|++|++.+.+.|.+......++
T Consensus         3 ~~~~~~~~g~~s~~G~R~~nED~~~~~~~-----------~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~   71 (274)
T 2iq1_A            3 LKISLENVGCASQIGKRKENEDRFDFAQL-----------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNL   71 (274)
T ss_dssp             --CCGGGCEEEEECCSSSSCCEEEEEEEC-----------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCH
T ss_pred             ccccCCeEEEEecccCCCCccceEEEeeC-----------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccH
Confidence            34556778999999999999999987642           1467899999999999999999999999987765445678


Q ss_pred             HHHHHHHHHHHhHHHHhhhccc---cccCCCceEEEEEEeC-CEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHH
Q 016743          159 EKVVTRSFIETDAALLKSCSIE---SALSSGTTALTAMIFG-RSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMR  234 (383)
Q Consensus       159 ~~~l~~a~~~~~~~i~~~~~~~---~~~~~GtT~~~~li~~-~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~R  234 (383)
                      .++|.++|..+|+.+.+.....   ....+|||++++++.+ .++|++||||||+|++|+|++++||+||+|..+.|+.|
T Consensus        72 ~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~R  151 (274)
T 2iq1_A           72 ETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKER  151 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHH
Confidence            8999999999999998765321   2346999999999985 59999999999999999999999999999999999999


Q ss_pred             HHHcCCeeecC-----cccCcccccccccccccccccccCCCCCCceecceEEEEEecCC-CeEEEEecccccCcCChHH
Q 016743          235 IQSLGGYIDDG-----YLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNE-DEFLIIGSDGIWDVFTSQN  308 (383)
Q Consensus       235 i~~~gg~v~~~-----~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~-d~fLIL~SDGlwd~l~~~e  308 (383)
                      |+++||.|...     ++++.+.+|||||+..+|..        ++.++|++..+++.++ |+|||||||||||++++++
T Consensus       152 i~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~--------~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~e  223 (274)
T 2iq1_A          152 IKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTS--------GVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQE  223 (274)
T ss_dssp             HHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTT--------TCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHH
T ss_pred             HHHcCCEEEcCCCCceeECCeEeeccccCChhhccC--------CEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHH
Confidence            99999999743     56889999999999987743        3688999999999985 5699999999999999999


Q ss_pred             HHHHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCC
Q 016743          309 AVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPP  355 (383)
Q Consensus       309 i~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~  355 (383)
                      +.+++.    ...+++++|+.|++.|+++|+.||+|||||+|.....
T Consensus       224 i~~~~~----~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~  266 (274)
T 2iq1_A          224 ICDFVN----QCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGK  266 (274)
T ss_dssp             HHHHHH----TSSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC--
T ss_pred             HHHHHH----HcCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCC
Confidence            998865    3568999999999999999999999999999986544


No 5  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=3.6e-51  Score=398.42  Aligned_cols=262  Identities=31%  Similarity=0.512  Sum_probs=219.2

Q ss_pred             eeeeecccCCCCCCceEEEeecchhh-----hC----C-CCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC--
Q 016743           86 SGEWSDIGDRTYMEDTHVCISDLAKK-----FG----N-KLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD--  153 (383)
Q Consensus        86 ~~~~s~~G~R~~nED~~~v~~~~~~~-----~~----~-~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~--  153 (383)
                      ||..|++|+|.+|||++++..++...     .+    . .........||+|||||||+.+|++|++.++..|.+...  
T Consensus        16 ~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~   95 (337)
T 3qn1_B           16 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERI   95 (337)
T ss_dssp             EEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence            59999999999999999998764310     00    0 000113678999999999999999999999998875321  


Q ss_pred             ------------CchhHHHHHHHHHHHHhHHHHhhhc------------cccccCCCceEEEEEEeCCEEEEEEcCCceE
Q 016743          154 ------------FPLDIEKVVTRSFIETDAALLKSCS------------IESALSSGTTALTAMIFGRSLLVANAGDCRA  209 (383)
Q Consensus       154 ------------~~~~~~~~l~~a~~~~~~~i~~~~~------------~~~~~~~GtT~~~~li~~~~l~vanvGDSR~  209 (383)
                                  ....+.++|+++|..+|..+.....            ......||||++++++.++.+|+|||||||+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~  175 (337)
T 3qn1_B           96 KDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRA  175 (337)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEE
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEE
Confidence                        1346789999999999999987541            1122369999999999999999999999999


Q ss_pred             EEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeec---CcccCcccccccccccccccccccCCCCCCceecceEEEEEe
Q 016743          210 VLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDD---GYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTL  286 (383)
Q Consensus       210 yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~---~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l  286 (383)
                      |++|+|.+++||+||+|..+.|+.||...||.+..   ++++|.+++||+||+..+|.         .+.++|++..+.+
T Consensus       176 ~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~---------~v~~~pdv~~~~~  246 (337)
T 3qn1_B          176 VLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKP---------YVIPEPEVTFMPR  246 (337)
T ss_dssp             EEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTT---------TSBCCCEEEEEEC
T ss_pred             EEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccC---------CCCCcceEEEEEe
Confidence            99999999999999999999999999999999873   68899999999999987764         3788999999999


Q ss_pred             cCCCeEEEEecccccCcCChHHHHHHHHHHHhc-----------------cCCHHHHHHHHHHHHHHCCCCCceeEEEEE
Q 016743          287 TNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQE-----------------HNDLKLCCKEMVKEAIKRGGTDNLTIVMVS  349 (383)
Q Consensus       287 ~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~-----------------~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~  349 (383)
                      .+.++|||||||||||++++++++++++..+..                 ..+++.+|+.|++.|+.+|+.||+|||||+
T Consensus       247 ~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~  326 (337)
T 3qn1_B          247 SREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVID  326 (337)
T ss_dssp             CTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEE
T ss_pred             CCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEE
Confidence            777779999999999999999999999864321                 346789999999999999999999999999


Q ss_pred             ccCCCCC
Q 016743          350 FHLEPPP  356 (383)
Q Consensus       350 l~~~~~~  356 (383)
                      |+..+.+
T Consensus       327 l~~~~~~  333 (337)
T 3qn1_B          327 LKAQRKF  333 (337)
T ss_dssp             CCSCC--
T ss_pred             ecCCccc
Confidence            9876443


No 6  
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=1.9e-50  Score=391.12  Aligned_cols=265  Identities=25%  Similarity=0.442  Sum_probs=217.1

Q ss_pred             cceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-------
Q 016743           82 PALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-------  154 (383)
Q Consensus        82 ~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-------  154 (383)
                      +.+.++++|++|+|++|||++++.....       .......+|+|||||||+.+|++|++.+++.|.+...+       
T Consensus        20 ~~~~~~~~s~~G~R~~nED~~~~~~~~~-------~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l   92 (324)
T 2i44_A           20 PAFDAAIFTDIGGRKHQEDRFTLCPQLV-------PGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEML   92 (324)
T ss_dssp             TTEEEEEEEECTTSSSCCEEEEEESCCS-------TTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             cceEEEEEECCCCCCccCCeEEEEecCC-------CCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            4688999999999999999998875421       12356789999999999999999999999998663111       


Q ss_pred             -------------chhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeC---C-ee
Q 016743          155 -------------PLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRR---G-AA  217 (383)
Q Consensus       155 -------------~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~---g-~~  217 (383)
                                   ...+.++|.++|..+|+.|.+..........|+|++++++.++++|+|||||||+|++|+   | .+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~  172 (324)
T 2i44_A           93 RSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNC  172 (324)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEE
T ss_pred             hccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEeccCCCceE
Confidence                         234578899999999999987654322222344444445899999999999999999997   7 89


Q ss_pred             eecCCCCCCCChHHHHHHHHcCCeeec--------CcccCcccccccccc----cccccccccCC-CCCCceecceEEEE
Q 016743          218 VELSEDHRPDCTKERMRIQSLGGYIDD--------GYLNGQLGVTRALGD----WHLEGMKEMGG-RGGPLSAEPELKLV  284 (383)
Q Consensus       218 ~~LT~DH~~~~~~E~~Ri~~~gg~v~~--------~~~~g~l~ltralGd----~~~k~~~~~~~-~~~~~~~~Pdi~~~  284 (383)
                      ++||+||+|..+.|+.||.++||.+..        .+..|.++++||+||    +.+|+...... ..++++++|++..+
T Consensus       173 ~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~  252 (324)
T 2i44_A          173 EFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVV  252 (324)
T ss_dssp             EESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEE
T ss_pred             EECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEE
Confidence            999999999999999999999999942        135788999999999    55543221111 34567899999999


Q ss_pred             EecCCCeEEEEecccccCcCChHHHHHHHHHHHhccCCHHH--HHHHHHHHHHHCCCCCceeEEEEEccCC
Q 016743          285 TLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKL--CCKEMVKEAIKRGGTDNLTIVMVSFHLE  353 (383)
Q Consensus       285 ~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~~~~~--~a~~Lv~~A~~~g~~DNiTvIvv~l~~~  353 (383)
                      ++.++|+|||||||||||+++++++++++...+....++++  +|+.|++.|+.+|+.||+|||||+|+..
T Consensus       253 ~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~  323 (324)
T 2i44_A          253 RVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFKKT  323 (324)
T ss_dssp             ECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC--
T ss_pred             EcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeeCC
Confidence            99999889999999999999999999999887666678999  9999999999999999999999999753


No 7  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=5.6e-50  Score=393.47  Aligned_cols=261  Identities=21%  Similarity=0.366  Sum_probs=220.0

Q ss_pred             eeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHHH
Q 016743           84 LRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVT  163 (383)
Q Consensus        84 ~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~  163 (383)
                      +.++..|++|+|..|||++++...+.        ......||+|||||||+.||++|+++|+.+|.+...+.   .+.|+
T Consensus        13 ~~~~~~s~~G~R~~nED~~~v~~~~~--------~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~~---~~~l~   81 (364)
T 2isn_A           13 TTTVAATMLGRRPTDEDAILVSAPAT--------SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEFT---FAEVK   81 (364)
T ss_dssp             EEEEEEEECTTSSSCCEEEEEECC------------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSCC---HHHHH
T ss_pred             eEEEEEEcCCCCCcCCCeeEEeccCC--------CCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhccc---HHHHH
Confidence            67899999999999999999875532        23567899999999999999999999999997644333   56789


Q ss_pred             HHHHHHhHHHHhhhccccccCCCceEEEEEEeC-----------------------------------------------
Q 016743          164 RSFIETDAALLKSCSIESALSSGTTALTAMIFG-----------------------------------------------  196 (383)
Q Consensus       164 ~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~-----------------------------------------------  196 (383)
                      ++|..+|+.|.+.....  ..+|||++++++.+                                               
T Consensus        82 ~a~~~~d~~i~~~~~~~--~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~  159 (364)
T 2isn_A           82 KACLSLDAEIIRKLGPK--HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPR  159 (364)
T ss_dssp             HHHHHHHHHHHHHHCSS--SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCC
T ss_pred             HHHHHHHHHHHHhcccC--CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence            99999999997754332  36999999998852                                               


Q ss_pred             -------------CEEEEEEcCCceEEEE-eCCeeeecCCCCCCCChHHHHHHHHcCCeeecC---cccCcccccccccc
Q 016743          197 -------------RSLLVANAGDCRAVLS-RRGAAVELSEDHRPDCTKERMRIQSLGGYIDDG---YLNGQLGVTRALGD  259 (383)
Q Consensus       197 -------------~~l~vanvGDSR~yl~-r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~---~~~g~l~ltralGd  259 (383)
                                   .++|+|||||||+|++ |+|++++||+||+|..+.|+.||.++||+|..+   ++++.+++||||||
T Consensus       160 ~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltRalGd  239 (364)
T 2isn_A          160 VPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFGD  239 (364)
T ss_dssp             CCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEEC
T ss_pred             cccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeEEEecc
Confidence                         3899999999999999 789999999999999999999999999998764   66788899999999


Q ss_pred             cccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCC--hHHHHHHHHHH-HhccCCHHHHHHHHHHHHHH
Q 016743          260 WHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFT--SQNAVGFARRR-LQEHNDLKLCCKEMVKEAIK  336 (383)
Q Consensus       260 ~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~--~~ei~~~v~~~-l~~~~~~~~~a~~Lv~~A~~  336 (383)
                      ..+|....+....++++++|++..+.+.++| |||||||||||+++  ++++.+++... +....+++++|+.|++.|+.
T Consensus       240 ~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~  318 (364)
T 2isn_A          240 SDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYD  318 (364)
T ss_dssp             GGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             hhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Confidence            9887544433344568899999999999998 89999999999976  88998877543 34556899999999999999


Q ss_pred             CCCCCceeEEEEEccCCCCCCh
Q 016743          337 RGGTDNLTIVMVSFHLEPPPHA  358 (383)
Q Consensus       337 ~g~~DNiTvIvv~l~~~~~~~~  358 (383)
                      +|+.||+|||||+|...+++.+
T Consensus       319 ~g~~DNiTvivv~~~~~~~~~~  340 (364)
T 2isn_A          319 MNSQDNISVMLVAFHNQEVEHP  340 (364)
T ss_dssp             TTCCSCEEEEEEEECSSCCSSC
T ss_pred             cCCCCCEEEEEEEcCCCCCCCc
Confidence            9999999999999987654433


No 8  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=2.4e-50  Score=389.34  Aligned_cols=261  Identities=33%  Similarity=0.533  Sum_probs=215.0

Q ss_pred             eeeeeeecccCCCCCCceEEEeecchhhhC-----CCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC----C
Q 016743           84 LRSGEWSDIGDRTYMEDTHVCISDLAKKFG-----NKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD----F  154 (383)
Q Consensus        84 ~~~~~~s~~G~R~~nED~~~v~~~~~~~~~-----~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~----~  154 (383)
                      ..+|..|++|+|.+|||++++..++.....     ..........+|+|||||||+.++++|++.+++.|.+...    .
T Consensus         9 ~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~   88 (316)
T 3kdj_B            9 PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPM   88 (316)
T ss_dssp             -CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            457999999999999999998765421100     0011124678999999999999999999999998865321    1


Q ss_pred             -------chhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCC
Q 016743          155 -------PLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPD  227 (383)
Q Consensus       155 -------~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~  227 (383)
                             ...+.++|.++|..+|+.+....    ...+|||++++++.++++|+|||||||+|++|+|.+++||+||+|.
T Consensus        89 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~----~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~  164 (316)
T 3kdj_B           89 LSDGDTWLEKWKKALFNSFLRVDSEIESVA----PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPD  164 (316)
T ss_dssp             GGGTHHHHHHHHHHHHHHHHHHHHHGGGTS----CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTT
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHhccc----CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCC
Confidence                   12467889999999999885432    2369999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHcCCeee---cCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcC
Q 016743          228 CTKERMRIQSLGGYID---DGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVF  304 (383)
Q Consensus       228 ~~~E~~Ri~~~gg~v~---~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l  304 (383)
                      .+.|+.||...||.+.   .++++|.+++||+|||..+|.         .+.++|++..+.+.+.++|||||||||||++
T Consensus       165 ~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~---------~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l  235 (316)
T 3kdj_B          165 REDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP---------SIIPDPEVTAVKRVKEDDCLILASDGVWDVM  235 (316)
T ss_dssp             SHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTT---------TSBCCCEEEEEECCTTEEEEEEECHHHHTSS
T ss_pred             CHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCC---------CcCCCCceEEEEecCCCCEEEEEccCcccCC
Confidence            9999999999999986   468999999999999987764         3789999999996666669999999999999


Q ss_pred             ChHHHHHHHHHHHh-----------------------ccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCCC
Q 016743          305 TSQNAVGFARRRLQ-----------------------EHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPPH  357 (383)
Q Consensus       305 ~~~ei~~~v~~~l~-----------------------~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~~  357 (383)
                      ++++++++++..+.                       ...+++.+|+.|++.|+++|+.||+|||||++...+.++
T Consensus       236 ~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~  311 (316)
T 3kdj_B          236 TDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLK  311 (316)
T ss_dssp             CHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC----
T ss_pred             CHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCccc
Confidence            99999999986431                       123578999999999999999999999999998765443


No 9  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=1.4e-49  Score=390.18  Aligned_cols=252  Identities=21%  Similarity=0.351  Sum_probs=215.5

Q ss_pred             eecccCCC---CCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC----CCchhHHHH
Q 016743           89 WSDIGDRT---YMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA----DFPLDIEKV  161 (383)
Q Consensus        89 ~s~~G~R~---~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~----~~~~~~~~~  161 (383)
                      ++.+|+|.   .|||++++...           .....||+|||||||+.+|++|++.++..|.+..    .....+.++
T Consensus        25 ~~~~G~r~~~~~nED~~~~~~~-----------~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~   93 (358)
T 2irm_A           25 YKDDGRRCEGYESRDKKCLCIS-----------DNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKEL   93 (358)
T ss_dssp             ECSSSCEEECSSCCEEEEEEEC-----------SSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHH
T ss_pred             eecCCCCCCCCCCCceEEEEEC-----------CCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHH
Confidence            77899976   59999987642           2567899999999999999999999999997521    234567899


Q ss_pred             HHHHHHHHhHHHHhhhcc------------------------------------ccccCCCceEEEEEEeCCEEEEEEcC
Q 016743          162 VTRSFIETDAALLKSCSI------------------------------------ESALSSGTTALTAMIFGRSLLVANAG  205 (383)
Q Consensus       162 l~~a~~~~~~~i~~~~~~------------------------------------~~~~~~GtT~~~~li~~~~l~vanvG  205 (383)
                      |+++|..+|+.|.+....                                    .....||||++++++.++++|+||||
T Consensus        94 l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvG  173 (358)
T 2irm_A           94 IRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIG  173 (358)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcc
Confidence            999999999999763210                                    12236999999999999999999999


Q ss_pred             CceEEEEeC---C--eeeecCCCCCCCChHHHHHHHHcCCeeecCcccCccccccccccccccccc----ccC-CCCCCc
Q 016743          206 DCRAVLSRR---G--AAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMK----EMG-GRGGPL  275 (383)
Q Consensus       206 DSR~yl~r~---g--~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~----~~~-~~~~~~  275 (383)
                      |||+|++|+   |  .+++||+||+|..+.|+.||.++||.+..+++.|.+ +||||||+.+|...    .++ ...+++
T Consensus       174 DSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v  252 (358)
T 2irm_A          174 NCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEPV  252 (358)
T ss_dssp             SCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSS
T ss_pred             cCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEeccCcCCEE-cccCCcCHHHhccccccccccccCCCCE
Confidence            999999998   8  999999999999999999999999999999988877 99999998876421    111 123468


Q ss_pred             eecceEE-EEEecCCCeEEEEecccccCcCC----------hHHHHHHHHHHHhccCCHHHHHHHHHHHHHH--------
Q 016743          276 SAEPELK-LVTLTNEDEFLIIGSDGIWDVFT----------SQNAVGFARRRLQEHNDLKLCCKEMVKEAIK--------  336 (383)
Q Consensus       276 ~~~Pdi~-~~~l~~~d~fLIL~SDGlwd~l~----------~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~--------  336 (383)
                      +++|++. .+++.++|.|||||||||||+++          ++++++++...+....+++.+|+.|++.|++        
T Consensus       253 ~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~  332 (358)
T 2irm_A          253 IFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQ  332 (358)
T ss_dssp             BCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhcc
Confidence            9999999 49999999999999999999999          8999999988776678999999999999976        


Q ss_pred             -------CC--CCCceeEEEEEccC
Q 016743          337 -------RG--GTDNLTIVMVSFHL  352 (383)
Q Consensus       337 -------~g--~~DNiTvIvv~l~~  352 (383)
                             +|  +.||||||||+|..
T Consensus       333 ~~~~~~~~Gg~~~DNiTvivv~~~~  357 (358)
T 2irm_A          333 LVEEHRSVTFNSRDDVTLLIRNFNY  357 (358)
T ss_dssp             HHSSSCCCCCCEECCEEEEEEESCC
T ss_pred             ccccccccCCCCCCCeEEEEEeCCC
Confidence                   47  89999999999964


No 10 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-49  Score=392.23  Aligned_cols=255  Identities=24%  Similarity=0.315  Sum_probs=215.6

Q ss_pred             eeeeeeecccCCCCCCc-----eEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhH
Q 016743           84 LRSGEWSDIGDRTYMED-----THVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDI  158 (383)
Q Consensus        84 ~~~~~~s~~G~R~~nED-----~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~  158 (383)
                      +.++.+|++|+|++|||     ++++...+.        ......||+|||||||+.+|++|+++++..|.+...   ..
T Consensus        13 ~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~--------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~---~~   81 (377)
T 3d8k_A           13 TVCASATSRNRRPTSESPHSDDVVVVEGMLR--------GRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLRD---VN   81 (377)
T ss_dssp             HHHHHTTTCEEEEEECC---CEEEEEEEECS--------SCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCSS---SS
T ss_pred             EEEEEEEccCCCCccccchhcceEEEecccC--------CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhcc---cH
Confidence            56788999999998755     444443221        236778999999999999999999999999976443   34


Q ss_pred             HHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe-------------------------------------------
Q 016743          159 EKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIF-------------------------------------------  195 (383)
Q Consensus       159 ~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~-------------------------------------------  195 (383)
                      .++|+++|.++|+.|.+..     ..+|||++++++.                                           
T Consensus        82 ~~al~~af~~~d~~l~~~~-----~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~  156 (377)
T 3d8k_A           82 EEEITRQFERMDGDLRAAN-----LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFR  156 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-----CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGG
T ss_pred             HHHHHHHHHHHHHHHHhcc-----cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecc
Confidence            7889999999999998763     2589999998885                                           


Q ss_pred             --------CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeee--cC--cccCcccccccccccccc
Q 016743          196 --------GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYID--DG--YLNGQLGVTRALGDWHLE  263 (383)
Q Consensus       196 --------~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~--~~--~~~g~l~ltralGd~~~k  263 (383)
                              ++.+|+|||||||+|++|+|.+++||+||+|..+.|+.||.++||.+.  .+  |++|.+++||||||..+|
T Consensus       157 ~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k  236 (377)
T 3d8k_A          157 RDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFK  236 (377)
T ss_dssp             GCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGS
T ss_pred             cccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhh
Confidence                    148999999999999999999999999999999999999999999987  45  788999999999999998


Q ss_pred             cccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHCCCCCc
Q 016743          264 GMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQ-EHNDLKLCCKEMVKEAIKRGGTDN  342 (383)
Q Consensus       264 ~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~-~~~~~~~~a~~Lv~~A~~~g~~DN  342 (383)
                      ........++.++++|++..+++.++| |||||||||||+++++++++++...+. ...+++.+|+.|++.|+.+|+.||
T Consensus       237 ~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DN  315 (377)
T 3d8k_A          237 KGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKN  315 (377)
T ss_dssp             CC---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSC
T ss_pred             cccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCC
Confidence            776666677789999999999999998 789999999999999998876543221 245899999999999999999999


Q ss_pred             eeEEEEEccCCCC
Q 016743          343 LTIVMVSFHLEPP  355 (383)
Q Consensus       343 iTvIvv~l~~~~~  355 (383)
                      ||||||+|...+.
T Consensus       316 iTvivv~~~~~~~  328 (377)
T 3d8k_A          316 ISTFVRHLPESRT  328 (377)
T ss_dssp             CCEEEEECCSSCC
T ss_pred             EEEEEEEecCCcc
Confidence            9999999987654


No 11 
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=3.9e-49  Score=392.28  Aligned_cols=262  Identities=23%  Similarity=0.378  Sum_probs=221.9

Q ss_pred             CcceeeeeeecccCCC--------CCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC
Q 016743           81 VPALRSGEWSDIGDRT--------YMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA  152 (383)
Q Consensus        81 ~~~~~~~~~s~~G~R~--------~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~  152 (383)
                      .+.+.+|.++++|+|.        .|||++++...           .....||+|||||||+.+|++|+++++..|.+..
T Consensus        24 ~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~-----------~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~   92 (401)
T 2j4o_A           24 CHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRS-----------ENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQ   92 (401)
T ss_dssp             CTTEEEEEECCEEECSSSSCEECCCCCEEEEEEEE-----------TTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSS
T ss_pred             cccCceeEEecccccccccccCCCCCCceEEEecC-----------CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            3467889999999988        49999987642           2567899999999999999999999999886532


Q ss_pred             ----CCchhHHHHHHHHHHHHhHHHHhhhcc-----------------------------------ccccCCCceEEEEE
Q 016743          153 ----DFPLDIEKVVTRSFIETDAALLKSCSI-----------------------------------ESALSSGTTALTAM  193 (383)
Q Consensus       153 ----~~~~~~~~~l~~a~~~~~~~i~~~~~~-----------------------------------~~~~~~GtT~~~~l  193 (383)
                          .....+.++|+++|..+|+.|.+....                                   .....+|||+++++
T Consensus        93 ~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~l  172 (401)
T 2j4o_A           93 LNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAV  172 (401)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEE
Confidence                124578889999999999988763210                                   01236999999999


Q ss_pred             EeCCEEEEEEcCCceEEEEeCC----eeeecCCCCCCCChHHHHHHHHcCCeee---cCcccCccccccccccccccccc
Q 016743          194 IFGRSLLVANAGDCRAVLSRRG----AAVELSEDHRPDCTKERMRIQSLGGYID---DGYLNGQLGVTRALGDWHLEGMK  266 (383)
Q Consensus       194 i~~~~l~vanvGDSR~yl~r~g----~~~~LT~DH~~~~~~E~~Ri~~~gg~v~---~~~~~g~l~ltralGd~~~k~~~  266 (383)
                      |.++++|+|||||||+|++|++    .+++||.||+|..+.|+.||.++||.+.   ..+++|.+++||||||+.+|...
T Consensus       173 i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~  252 (401)
T 2j4o_A          173 LLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGY  252 (401)
T ss_dssp             EETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSG
T ss_pred             EECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcccc
Confidence            9999999999999999999998    9999999999999999999999999873   45788889999999999877432


Q ss_pred             cc-----CCCCCCceecceEEE-EEecCCCeEEEEecccccCcC--------ChHHHHHHHHHHHhccCCHHHHHHHHHH
Q 016743          267 EM-----GGRGGPLSAEPELKL-VTLTNEDEFLIIGSDGIWDVF--------TSQNAVGFARRRLQEHNDLKLCCKEMVK  332 (383)
Q Consensus       267 ~~-----~~~~~~~~~~Pdi~~-~~l~~~d~fLIL~SDGlwd~l--------~~~ei~~~v~~~l~~~~~~~~~a~~Lv~  332 (383)
                      ..     ....++++++|++.. +.+.++|.|||||||||||++        ++++++++|...+....+++.+|+.|++
T Consensus       253 ~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~  332 (401)
T 2j4o_A          253 TDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVD  332 (401)
T ss_dssp             GGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred             cccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence            11     123456899999996 999999999999999999999        8999999998877767899999999999


Q ss_pred             HHHH-------CCC--------CCceeEEEEEccCC
Q 016743          333 EAIK-------RGG--------TDNLTIVMVSFHLE  353 (383)
Q Consensus       333 ~A~~-------~g~--------~DNiTvIvv~l~~~  353 (383)
                      .|++       +|+        .||||||||+|...
T Consensus       333 ~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~  368 (401)
T 2j4o_A          333 RVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP  368 (401)
T ss_dssp             HHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred             HHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence            9986       666        89999999999753


No 12 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=1.7e-48  Score=386.41  Aligned_cols=251  Identities=33%  Similarity=0.517  Sum_probs=219.5

Q ss_pred             ceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHH
Q 016743           83 ALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVV  162 (383)
Q Consensus        83 ~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l  162 (383)
                      .+.+|.+|++|+|..|||++++...           .....+|+|||||||+.+|++|++.+.+.+.+.......+.++|
T Consensus       121 ~~~~g~~s~~G~R~~NED~~~~~~~-----------~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l  189 (389)
T 4da1_A          121 LENVGCASQIGKRKENEDRFDFAQL-----------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLL  189 (389)
T ss_dssp             GGGCEEEEECTTSSSCCEEEEEEEC-----------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred             ceeEEEecCCCCCCCCcceeeeeec-----------CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHH
Confidence            3567899999999999999987542           25678999999999999999999999999987665566788999


Q ss_pred             HHHHHHHhHHHHhhhccc---cccCCCceEEEEEEeCC-EEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016743          163 TRSFIETDAALLKSCSIE---SALSSGTTALTAMIFGR-SLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSL  238 (383)
Q Consensus       163 ~~a~~~~~~~i~~~~~~~---~~~~~GtT~~~~li~~~-~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~  238 (383)
                      .++|..+|+.+.+.....   ....+|||++++++.++ .+++|||||||+|++|+|.+++||+||+|..+.|++||...
T Consensus       190 ~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~  269 (389)
T 4da1_A          190 TLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKC  269 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHc
Confidence            999999999998765332   13359999999999876 99999999999999999999999999999999999999999


Q ss_pred             CCeeec-----CcccCcccccccccccccccccccCCCCCCceecceEEEEEecCC-CeEEEEecccccCcCChHHHHHH
Q 016743          239 GGYIDD-----GYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNE-DEFLIIGSDGIWDVFTSQNAVGF  312 (383)
Q Consensus       239 gg~v~~-----~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~-d~fLIL~SDGlwd~l~~~ei~~~  312 (383)
                      ||.+..     .++++.+++|||||+..+|..        ++.++|++..+.+..+ ++|||||||||||++++++++++
T Consensus       270 gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~--------~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~i  341 (389)
T 4da1_A          270 GGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTS--------GVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDF  341 (389)
T ss_dssp             TCCEECC---CCEETTTBSCSBCEECGGGGGG--------TCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHH
T ss_pred             CCeEecccCCCccCCCeEeeEeeeCChhhccC--------CCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHH
Confidence            999874     477889999999999988753        3688999999999864 67999999999999999999999


Q ss_pred             HHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          313 ARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       313 v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      +..    ..+++++|+.|++.|+++|+.||+|||||+|..+...
T Consensus       342 l~~----~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~  381 (389)
T 4da1_A          342 VNQ----CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKY  381 (389)
T ss_dssp             HHH----SSSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC---
T ss_pred             HHh----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCCC
Confidence            754    4689999999999999999999999999999876543


No 13 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=1.2e-47  Score=387.66  Aligned_cols=259  Identities=28%  Similarity=0.396  Sum_probs=209.6

Q ss_pred             eeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcC----------
Q 016743           84 LRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDA----------  152 (383)
Q Consensus        84 ~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~----------  152 (383)
                      .-.++.|++|. |..|||++.+...+.          ....||||||||||+.+|++|+++++.+|....          
T Consensus        37 ~v~~~~s~~g~~R~~nED~~~v~~~~~----------~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~  106 (467)
T 2pnq_A           37 SILGFDSNRLPANAPIEDRRSATTCLQ----------TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIE  106 (467)
T ss_dssp             SEEEEEEEEECCSSSCCEEEEEEEESS----------SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             ceEEEEeeccCCCCCCCCceeeeeccC----------CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhh
Confidence            34566677876 999999998765431          356799999999999999999999998875320          


Q ss_pred             --------------------CC----------------------------c-hhHHHHHHHHHHHHhHHHHhhhcc----
Q 016743          153 --------------------DF----------------------------P-LDIEKVVTRSFIETDAALLKSCSI----  179 (383)
Q Consensus       153 --------------------~~----------------------------~-~~~~~~l~~a~~~~~~~i~~~~~~----  179 (383)
                                          .+                            . ..+.++|+++|.++|+.|.+....    
T Consensus       107 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~  186 (467)
T 2pnq_A          107 NAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPN  186 (467)
T ss_dssp             TTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred             hhhhccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence                                00                            0 157889999999999999875431    


Q ss_pred             -------ccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeC---C--eeeecCCCCCCCChHHHHHHHHcCC------e
Q 016743          180 -------ESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRR---G--AAVELSEDHRPDCTKERMRIQSLGG------Y  241 (383)
Q Consensus       180 -------~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~---g--~~~~LT~DH~~~~~~E~~Ri~~~gg------~  241 (383)
                             .....||||++++++.++.+|+|||||||+|++|.   |  .+++||.||+|.++.|++||.+.|+      .
T Consensus       187 ~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~  266 (467)
T 2pnq_A          187 SFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSV  266 (467)
T ss_dssp             HHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHH
T ss_pred             cccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCccccee
Confidence                   11235999999999999999999999999999984   7  7999999999999999999999985      4


Q ss_pred             eecCcccCccccccccccccccccccc---------C---------------CCCCCceecceEEEEEecCCCeEEEEec
Q 016743          242 IDDGYLNGQLGVTRALGDWHLEGMKEM---------G---------------GRGGPLSAEPELKLVTLTNEDEFLIIGS  297 (383)
Q Consensus       242 v~~~~~~g~l~ltralGd~~~k~~~~~---------~---------------~~~~~~~~~Pdi~~~~l~~~d~fLIL~S  297 (383)
                      +..+|+.|.+++||||||..+|.....         +               ...++++++|+|..+.+.++|.||||||
T Consensus       267 ~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaS  346 (467)
T 2pnq_A          267 VKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLAT  346 (467)
T ss_dssp             BSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEEC
T ss_pred             EecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEe
Confidence            457899999999999999988743110         0               1234589999999999999999999999


Q ss_pred             ccccCcCChHHHHHHHHHHHhccC--CH------------------------------HHHHHHHHHHHHHCC-------
Q 016743          298 DGIWDVFTSQNAVGFARRRLQEHN--DL------------------------------KLCCKEMVKEAIKRG-------  338 (383)
Q Consensus       298 DGlwd~l~~~ei~~~v~~~l~~~~--~~------------------------------~~~a~~Lv~~A~~~g-------  338 (383)
                      |||||+|++++++++|...+....  +|                              +.+|..|++.|+..|       
T Consensus       347 DGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~  426 (467)
T 2pnq_A          347 DGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDH  426 (467)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC---------
T ss_pred             cCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchH
Confidence            999999999999999988763211  22                              567999999999765       


Q ss_pred             ----------------CCCceeEEEEEccC
Q 016743          339 ----------------GTDNLTIVMVSFHL  352 (383)
Q Consensus       339 ----------------~~DNiTvIvv~l~~  352 (383)
                                      .+||||||||+|..
T Consensus       427 ~~~~~ll~~~~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          427 ERLSKMLSLPEELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             ----------------CCSCEEEEEEEECH
T ss_pred             HHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence                            38999999999963


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00  E-value=2.2e-43  Score=328.72  Aligned_cols=236  Identities=22%  Similarity=0.314  Sum_probs=197.2

Q ss_pred             ceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHh-hcC--CC--ch
Q 016743           83 ALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIV-EDA--DF--PL  156 (383)
Q Consensus        83 ~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~-~~~--~~--~~  156 (383)
                      .|+++++|++|+ |+.|||++++....           ....+|+|||||||+.+|++|++.+.+.|. +..  .+  ..
T Consensus         5 ~~~~~~~s~~G~~r~~neD~~~~~~~~-----------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~   73 (250)
T 2pk0_A            5 YMEISLLTDIGQRRSNNQDFINQFENK-----------AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELS   73 (250)
T ss_dssp             CEEEEEEEECCTTCSCCCEEEEEEECT-----------TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHH
T ss_pred             eEEEEEecCCCCCCCcCCCceEeccCC-----------CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChh
Confidence            478999999999 99999999887541           356899999999999999999999988886 322  12  45


Q ss_pred             hHHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHH
Q 016743          157 DIEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQ  236 (383)
Q Consensus       157 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~  236 (383)
                      .+.+.|.++|..+|+.+.+.........+|||++++++.+++++++|+||||+|++|+|++++||.||+|..+     +.
T Consensus        74 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~-----~~  148 (250)
T 2pk0_A           74 EIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE-----LV  148 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH-----HH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH-----HH
Confidence            6788999999999999988755433346999999999999999999999999999999999999999997433     33


Q ss_pred             HcCCeeecC--cccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHH
Q 016743          237 SLGGYIDDG--YLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFAR  314 (383)
Q Consensus       237 ~~gg~v~~~--~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~  314 (383)
                      +.|+....+  ..++.+.+||+||+.              ...+|++..+++.++| +||||||||||+++++++.+++.
T Consensus       149 ~~g~i~~~~~~~~~~~~~ltralG~~--------------~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~  213 (250)
T 2pk0_A          149 KAGQLTEEEAASHPQKNIITQSIGQA--------------NPVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLT  213 (250)
T ss_dssp             HTTSSCHHHHHTCCSCCCBSCCBSCS--------------SCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT
T ss_pred             HcCCCCHHHHHhCCCcceEEeecCCC--------------CCccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHh
Confidence            444433322  245678899999986              2568999999999998 68899999999999999988854


Q ss_pred             HHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Q 016743          315 RRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLE  353 (383)
Q Consensus       315 ~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~  353 (383)
                          ...+++++|+.|++.|+.+++.||+|||||++...
T Consensus       214 ----~~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~~  248 (250)
T 2pk0_A          214 ----QEKTLDDKNQDLITLANHRGGLDNITVALVYVESE  248 (250)
T ss_dssp             ----SSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC-
T ss_pred             ----cCCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeCC
Confidence                45689999999999999999999999999999753


No 15 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00  E-value=9.1e-42  Score=315.36  Aligned_cols=228  Identities=21%  Similarity=0.282  Sum_probs=188.1

Q ss_pred             ceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCC--CchhHH
Q 016743           83 ALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDAD--FPLDIE  159 (383)
Q Consensus        83 ~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~--~~~~~~  159 (383)
                      .++++..|++|+ |+.|||++++.                ..+|+|||||||+.+|++|++.+.+.|.+...  ....+.
T Consensus         4 ~~~~~~~s~~G~~r~~nED~~~~~----------------~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~   67 (237)
T 1txo_A            4 VLRYAARSDRGLVRANNEDSVYAG----------------ARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLL   67 (237)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEEC----------------SSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHH
T ss_pred             EEEEEEecCCCCCCCcCCCccccC----------------CCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHH
Confidence            378899999997 99999998742                24999999999999999999999999876432  224678


Q ss_pred             HHHHHHHHHHhHHHHhhhccccc-cCCCceEEEEEEeCCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 016743          160 KVVTRSFIETDAALLKSCSIESA-LSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSL  238 (383)
Q Consensus       160 ~~l~~a~~~~~~~i~~~~~~~~~-~~~GtT~~~~li~~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~  238 (383)
                      +.|.++|..+|..+.+....... ..+|||++++++.+++++++|+||||+|++|+|++.+||.||+|..     ++...
T Consensus        68 ~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~-----~~~~~  142 (237)
T 1txo_A           68 AKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQ-----TLVDE  142 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHH-----HHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHH-----HHHHc
Confidence            89999999999999876544322 3589999999999999999999999999999999999999998632     34444


Q ss_pred             CCeeecCc--ccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHH
Q 016743          239 GGYIDDGY--LNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRR  316 (383)
Q Consensus       239 gg~v~~~~--~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~  316 (383)
                      |.......  ......+||++|+.               ..+|++..+++.++|. ||||||||||+++++++.+++.  
T Consensus       143 G~i~~~~~~~~~~~~~~tr~lg~~---------------~~~p~~~~~~l~~~d~-lvl~SDGl~d~l~~~~i~~~~~--  204 (237)
T 1txo_A          143 GRITPEEAHSHPQRSLIMRALTGH---------------EVEPTLTMREARAGDR-YLLCSDGLSDPVSDETILEALQ--  204 (237)
T ss_dssp             TSSCTTGGGGCTTTTCBCCCBSSS---------------CCCCEEEEEECCTTCE-EEEECHHHHTTSCHHHHHHHHT--
T ss_pred             CCCCHHHHhhCccccceeeccCCC---------------CccceEEEEecCCCCE-EEEECCCCCCCCCHHHHHHHHh--
Confidence            43222111  12345689999854               5689999999999985 6799999999999999988864  


Q ss_pred             HhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEccC
Q 016743          317 LQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHL  352 (383)
Q Consensus       317 l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~  352 (383)
                         ..+++++|+.|++.|+.+|+.||+||||++|.+
T Consensus       205 ---~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~  237 (237)
T 1txo_A          205 ---IPEVAESAHRLIELALRGGGPDNVTVVVADLEH  237 (237)
T ss_dssp             ---SSSHHHHHHHHHHHHHHTTCCSCEEEEEEEEEC
T ss_pred             ---cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence               248999999999999999999999999999853


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00  E-value=1e-41  Score=315.44  Aligned_cols=229  Identities=21%  Similarity=0.285  Sum_probs=179.3

Q ss_pred             eeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCC-----chh
Q 016743           84 LRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADF-----PLD  157 (383)
Q Consensus        84 ~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~-----~~~  157 (383)
                      |+++++|++|+ |+.|||++ +...           .... +|+|||||||+.+|++|++.+.+.|.+....     ...
T Consensus         1 ~~~~~~s~~G~~r~~neD~~-~~~~-----------~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~   67 (240)
T 2j82_A            1 MDVAGLTDCGLIRKSNQDAF-YIDE-----------KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHD   67 (240)
T ss_dssp             CEEEEEEECCSSCSSCCEEE-EECT-----------TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             CeEEEeCCCCCCCCcCCCcc-EecC-----------CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence            46899999999 99999999 6543           1334 9999999999988888888877777542111     335


Q ss_pred             HHHHHHHHHHHHhHHHHhhhccc-cccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHH
Q 016743          158 IEKVVTRSFIETDAALLKSCSIE-SALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMR  234 (383)
Q Consensus       158 ~~~~l~~a~~~~~~~i~~~~~~~-~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~R  234 (383)
                      +.++|.++|..+|+.+.+..... ....+|||++++++.  +++++++|+||||+|++|+|++.+||.||+|..+     
T Consensus        68 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~-----  142 (240)
T 2j82_A           68 PVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ-----  142 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH-----
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH-----
Confidence            77889999999999998875443 223589999999999  9999999999999999999999999999997433     


Q ss_pred             HHHcCCeeecC--cccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHH
Q 016743          235 IQSLGGYIDDG--YLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGF  312 (383)
Q Consensus       235 i~~~gg~v~~~--~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~  312 (383)
                      +.+.|+....+  ..++.+.+||+||+.              ...+|++..+++.++| +||||||||||+++++++.++
T Consensus       143 ~~~~g~i~~~~~~~~~~~~~ltralG~~--------------~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~  207 (240)
T 2j82_A          143 AVQLGSLTIEQARQHPWRHVLSQCLGRE--------------DLSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIY  207 (240)
T ss_dssp             C----------------CCCBSCCBSCT--------------TCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHH
T ss_pred             HHHcCCCCHHHHhcCCCcCeEeecCCCC--------------CceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHH
Confidence            33344433322  245678899999986              3568999999999998 588999999999999999888


Q ss_pred             HHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEc
Q 016743          313 ARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSF  350 (383)
Q Consensus       313 v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l  350 (383)
                      +.     ..+++++|+.|++.|+.+++.||+||||+++
T Consensus       208 l~-----~~~~~~~a~~l~~~a~~~g~~DniTvivv~~  240 (240)
T 2j82_A          208 LS-----EPNVQKAAAALVDAAKTHGGRDNVTVVVISV  240 (240)
T ss_dssp             HT-----CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred             Hc-----cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence            64     5689999999999999999999999999975


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00  E-value=5.7e-40  Score=302.72  Aligned_cols=221  Identities=24%  Similarity=0.322  Sum_probs=185.1

Q ss_pred             ceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCch--HHHHHHHHhhhHHHhhcCCCchhHH
Q 016743           83 ALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGN--GAAHFVREHLPRVIVEDADFPLDIE  159 (383)
Q Consensus        83 ~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~--~aa~~a~~~l~~~l~~~~~~~~~~~  159 (383)
                      .++++.+|++|+ |+.|||++++  .              ..+|+|||||||+  .||+++.+.+..++....    + .
T Consensus         5 ~~~~~~~s~~G~~r~~neD~~~~--~--------------~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~~----~-~   63 (234)
T 2jfr_A            5 VLSAATATDQGPVRENNQDACLA--D--------------GILYAVADGFGARGHHASATALKTLSAGFAAAP----D-R   63 (234)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEE--E--------------TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHSC----S-H
T ss_pred             eEEEEEecCCCCCCCcCCCccee--C--------------CcEEEEEeCCCccHHHHHHHHHHHHHHHHhcCC----c-H
Confidence            478899999999 9999999965  2              2489999999976  788888888888776542    2 6


Q ss_pred             HHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEeCCE---EEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHH
Q 016743          160 KVVTRSFIETDAALLKSCSIESALSSGTTALTAMIFGRS---LLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQ  236 (383)
Q Consensus       160 ~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~~~~---l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~  236 (383)
                      +.|.++|..+|+.+.+........ +|||++++++.++.   ++++|+||||+|++|+|++.+||.||++..     ++.
T Consensus        64 ~~l~~~~~~~~~~l~~~~~~~~~~-~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~-----~~~  137 (234)
T 2jfr_A           64 DGLLEAVQQANLRVFELLGDEPTV-SGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAG-----ELV  137 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSSC-CEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHH-----HHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCC-CCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHH-----HHH
Confidence            789999999999998865443333 99999999999988   999999999999999999999999999743     344


Q ss_pred             HcCCeeec--CcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHH
Q 016743          237 SLGGYIDD--GYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFAR  314 (383)
Q Consensus       237 ~~gg~v~~--~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~  314 (383)
                      +.|+....  ...++.+.+||+||+.              ...+|++..+++.++| +||||||||||+++++++.+++ 
T Consensus       138 ~~g~i~~~~~~~~~~~~~~tralG~~--------------~~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-  201 (234)
T 2jfr_A          138 RMGEITRHEARWHPQRHLLTRALGIG--------------PHIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-  201 (234)
T ss_dssp             HTTSSCHHHHTTCTTTTCBSCCBSSS--------------SCCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-
T ss_pred             HcCCCCHHHHhcCcccceeeecCcCC--------------CCceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-
Confidence            45543322  1234678899999986              3578999999999998 5789999999999999998885 


Q ss_pred             HHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEc
Q 016743          315 RRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSF  350 (383)
Q Consensus       315 ~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l  350 (383)
                          ...+++++|+.|++.|+.+++.||+||||+++
T Consensus       202 ----~~~~~~~~a~~l~~~a~~~g~~DniTvivv~~  233 (234)
T 2jfr_A          202 ----TSPDPQVAVRRLVEVANDAGGSDNTTVVVIDL  233 (234)
T ss_dssp             ----TCSSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred             ----ccCCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence                35689999999999999999999999999987


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00  E-value=7.1e-37  Score=278.42  Aligned_cols=197  Identities=21%  Similarity=0.201  Sum_probs=151.5

Q ss_pred             CceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHHHHHHHHHhHHHHhhhcccc-ccCCCceEEEEEEe--C
Q 016743          120 EAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVVTRSFIETDAALLKSCSIES-ALSSGTTALTAMIF--G  196 (383)
Q Consensus       120 ~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~-~~~~GtT~~~~li~--~  196 (383)
                      ....+|+|||||||+.++++|++.+.+.|.+.......    +.++|..+|+.+.+...... ...||||++++++.  +
T Consensus         8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~----~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~   83 (211)
T 3rnr_A            8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS----PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRD   83 (211)
T ss_dssp             TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTT
T ss_pred             CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC----HHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCC
Confidence            56789999999999998888888888887653211112    25788888998887654332 23699999999999  9


Q ss_pred             CEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeecCcccCcccccccccccccccccccCCCCCCce
Q 016743          197 RSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLS  276 (383)
Q Consensus       197 ~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~  276 (383)
                      ++++++|+||||+|++|+|++++||+||++..     ++.+.|.  .....+.+..+||+||..              ..
T Consensus        84 ~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~-----~~~~~g~--~~~~~~~~~~ltralG~~--------------~~  142 (211)
T 3rnr_A           84 GTLEWASVGDCRVYLFKGGRLSRLSLDHNVSS-----EMVLLGR--GPVPGPAGEMITSFIGIE--------------NL  142 (211)
T ss_dssp             TEEEEEEESSCEEEEEETTEEEECCCCCBHHH-----HHHHTTS--CCCCSHHHHCBSCCBTCS--------------SC
T ss_pred             CEEEEEEEccCeEEEEeCCEEEEECCCcHHHH-----HHHHcCC--ChhhCCCccEEecccCCC--------------CC
Confidence            99999999999999999999999999999733     2344454  233344466799999975              24


Q ss_pred             ecceE--EEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHhccCCHHHHHHHHHHHHHHCC--CCCceeEEEEEc
Q 016743          277 AEPEL--KLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEHNDLKLCCKEMVKEAIKRG--GTDNLTIVMVSF  350 (383)
Q Consensus       277 ~~Pdi--~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g--~~DNiTvIvv~l  350 (383)
                      .+|++  ..+++.++| +||||||||||+++++++.+++..    ..+    |+.|++.|+++|  +.||+|||||+|
T Consensus       143 ~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~----~~~----a~~L~~~a~~~g~~~~DNiTvivv~L  211 (211)
T 3rnr_A          143 TEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSR----GSD----ARGILQEVEAQGRPYQDNATLALVIL  211 (211)
T ss_dssp             CCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECT----TSC----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred             cceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhc----CCh----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence            57888  789999999 466999999999999999777532    223    999999999999  999999999986


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.88  E-value=3.1e-22  Score=185.07  Aligned_cols=208  Identities=17%  Similarity=0.174  Sum_probs=139.7

Q ss_pred             ceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHH
Q 016743           83 ALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKV  161 (383)
Q Consensus        83 ~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~  161 (383)
                      .+.+++++..-. +..+.|.|.+...           .....+|+|+||+|+...|.+++..+...|.........    
T Consensus         7 ~i~~~~~~~~~p~~~v~GD~y~~~~~-----------~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~~----   71 (242)
T 3t91_A            7 RVSTGAAHAAKGGGLVSGDSYSMMEL-----------GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGID----   71 (242)
T ss_dssp             EEEEEEEEECTTSCSCCSCEEEEEEE-----------TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTCC----
T ss_pred             EEEEEeehhcCCccccCCcEEEEEEe-----------CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCCC----
Confidence            466777776544 7889999987654           145678999999997765554444443333221100012    


Q ss_pred             HHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcC
Q 016743          162 VTRSFIETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLG  239 (383)
Q Consensus       162 l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~g  239 (383)
                      +.+++..+|+.+....    ...+++|+++++++  ++.++++|+||+|+|++|+|.+.+++.++.|             
T Consensus        72 ~~~~l~~~n~~l~~~~----~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-------------  134 (242)
T 3t91_A           72 EKIAIKTINSILSLRT----TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP-------------  134 (242)
T ss_dssp             HHHHHHHHHHHHTTC--------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC----------------
T ss_pred             HHHHHHHHHHHHHhcC----CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce-------------
Confidence            3456667787776542    12589999999997  7899999999999999999999998776543             


Q ss_pred             CeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCC-----hHHHHHHHH
Q 016743          240 GYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFT-----SQNAVGFAR  314 (383)
Q Consensus       240 g~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~-----~~ei~~~v~  314 (383)
                                       +|-.              ....++...+.+.++|. |+||||||||.++     ...+..++.
T Consensus       135 -----------------lG~~--------------~~~~~~~~~~~l~~GD~-lll~SDGl~e~~~~~~~~~~~~~~ll~  182 (242)
T 3t91_A          135 -----------------IGII--------------NEFDVEVVSEQLKAGDL-LIMMSDGIFEGPKHVENHDLWMKRKMK  182 (242)
T ss_dssp             -------------------CC--------------CTTCEEEEEEECCTTCE-EEEECHHHHTCSTTCSCHHHHHHHHHH
T ss_pred             -----------------eEec--------------CCCcceEEEEEeCCCCE-EEEECCCcccCCCcccchHHHHHHHHH
Confidence                             4422              12355677888999995 7799999999988     344444433


Q ss_pred             HHHhccCCHHHHHHHHHHHHHHCC-C--CCceeEEEEEccCCCCC
Q 016743          315 RRLQEHNDLKLCCKEMVKEAIKRG-G--TDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       315 ~~l~~~~~~~~~a~~Lv~~A~~~g-~--~DNiTvIvv~l~~~~~~  356 (383)
                      .  ....+++++++.|++.+...+ +  .||+|++++++....++
T Consensus       183 ~--~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~~~~  225 (242)
T 3t91_A          183 G--LKTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHNTPK  225 (242)
T ss_dssp             T--CCCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEECCCC
T ss_pred             H--hcCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEecCCCc
Confidence            2  134689999999999998865 3  59999999999865544


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.86  E-value=4.9e-20  Score=170.61  Aligned_cols=204  Identities=15%  Similarity=0.089  Sum_probs=149.5

Q ss_pred             eeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHHH
Q 016743           84 LRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKVV  162 (383)
Q Consensus        84 ~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~l  162 (383)
                      +.++.++.... +..+.|.|.+...           ..+..+++|+||+|+...|.+++..+...+.+.......    .
T Consensus        11 ~~~~~~~~~~~~~~vgGD~y~~~~~-----------~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~   75 (242)
T 3pu9_A           11 IELAVAKTHKFGTRESGDTVELVER-----------PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----D   75 (242)
T ss_dssp             EEEEEEEECCTTCSSCSEEEEEEEC-----------TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----H
T ss_pred             EEEEEEecccCccccCCceEEEEEe-----------CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----H
Confidence            45566665544 6788899987643           135567999999999888888877665555432111112    3


Q ss_pred             HHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCC
Q 016743          163 TRSFIETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLGG  240 (383)
Q Consensus       163 ~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg  240 (383)
                      .+++..+|+.+....    ...+++|+++++++  .+.++++|+||+++|++|+|.+.+|+.+|.|              
T Consensus        76 ~~~l~~~n~~l~~~~----~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~--------------  137 (242)
T 3pu9_A           76 GAAARAAHDFLYAMR----DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR--------------  137 (242)
T ss_dssp             HHHHHHHHHHHHHHT----TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC--------------
T ss_pred             HHHHHHHHHHHHhcc----CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc--------------
Confidence            456777888886543    12488999999997  6799999999999999999999999998864              


Q ss_pred             eeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCCh-------HHHHHHH
Q 016743          241 YIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTS-------QNAVGFA  313 (383)
Q Consensus       241 ~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~-------~ei~~~v  313 (383)
                                      +|-.              ....++...+.+.++| .|+||||||++....       +++..+ 
T Consensus       138 ----------------lG~~--------------~~~~~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~l-  185 (242)
T 3pu9_A          138 ----------------IGIY--------------RHTRPRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEFLATGGR-  185 (242)
T ss_dssp             ----------------BSSC--------------TTCCCEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCHHHHHHH-
T ss_pred             ----------------cccc--------------CCCCceEEEEEeCCCC-EEEEECcCcccCCCCccccccHHHHHHH-
Confidence                            4522              1235677888999999 477999999987543       566332 


Q ss_pred             HHHHh-ccCCHHHHHHHHHHHHHHCC---CCCceeEEEEEccCCCC
Q 016743          314 RRRLQ-EHNDLKLCCKEMVKEAIKRG---GTDNLTIVMVSFHLEPP  355 (383)
Q Consensus       314 ~~~l~-~~~~~~~~a~~Lv~~A~~~g---~~DNiTvIvv~l~~~~~  355 (383)
                         +. ...+++++++.|++.+...+   ..||+|++++++.+..+
T Consensus       186 ---~~~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~~~  228 (242)
T 3pu9_A          186 ---VAGPETPAQAIADELLEAALVADDGRAGDDMTVVVLRLRNVEE  228 (242)
T ss_dssp             ---HCCTTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEECCC
T ss_pred             ---HhccCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEecCCC
Confidence               22 34689999999999998765   57999999999976433


No 21 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.78  E-value=2.6e-17  Score=147.12  Aligned_cols=188  Identities=14%  Similarity=0.103  Sum_probs=138.6

Q ss_pred             ceeeeeeecccC-CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhHHHH
Q 016743           83 ALRSGEWSDIGD-RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDIEKV  161 (383)
Q Consensus        83 ~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~~~~  161 (383)
                      .++++.++.... +..+.|.|.+...            .+..+++|+||+|....|.+++..+...|.+...  ..+.  
T Consensus         3 ~~~~~~~~~p~~~~~v~GD~y~~~~~------------~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~~--~~p~--   66 (193)
T 3zt9_A            3 KLEVGIYTRAREGEIACGDACLVKRV------------EGVIFLAVGDGIGHGPEAARAAEIAIASMESSMN--TGLV--   66 (193)
T ss_dssp             CCCEEEEEECCTTCSSCSEEEEEEEE------------TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHTT--SCHH--
T ss_pred             ccEEEEEEeccCCCCCCCCeEEEEEe------------CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHccc--CCHH--
Confidence            356677776654 6778899987643            4578999999999777777777777777765432  2233  


Q ss_pred             HHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEeCCeeeecCCCCCCCChHHHHHHHHcC
Q 016743          162 VTRSFIETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSRRGAAVELSEDHRPDCTKERMRIQSLG  239 (383)
Q Consensus       162 l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~g  239 (383)
                        +.+..+|+.+..        ..|+|++++.++  .+.+.++|+|+++.|++|+++...+...+.              
T Consensus        67 --~il~~ln~~l~~--------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g--------------  122 (193)
T 3zt9_A           67 --NIFQLCHRELRG--------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPG--------------  122 (193)
T ss_dssp             --HHHHHHHHHHTT--------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCC--------------
T ss_pred             --HHHHHHHHHHhc--------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCC--------------
Confidence              345566777743        257888888887  679999999999999999987765533211              


Q ss_pred             CeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHHHHHHHHHHHhc
Q 016743          240 GYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQNAVGFARRRLQE  319 (383)
Q Consensus       240 g~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~  319 (383)
                                      .+|..              ....++...+++.++| .|+|+||||++.+..+++..++      
T Consensus       123 ----------------~lG~~--------------~~~~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~------  165 (193)
T 3zt9_A          123 ----------------ILGYN--------------YPHQLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLANY------  165 (193)
T ss_dssp             ----------------BBTTB--------------CCSSCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGGCT------
T ss_pred             ----------------ceecc--------------CCccceeEEeccCCCC-EEEEECCCCCCccChhhhhchh------
Confidence                            13421              1124556788899999 5779999999999998875542      


Q ss_pred             cCCHHHHHHHHHHHHHHCCCCCceeEEEEE
Q 016743          320 HNDLKLCCKEMVKEAIKRGGTDNLTIVMVS  349 (383)
Q Consensus       320 ~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~  349 (383)
                      ..+++++|+.|++.+  .++.||+||+|++
T Consensus       166 ~~~~~~~a~~l~~~~--~~~~Dd~tvlv~r  193 (193)
T 3zt9_A          166 RLTAEELVRLIGEKY--GRRDDDVAVIVAR  193 (193)
T ss_dssp             TSCHHHHHHHHHHHH--CCTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHh--CcCCCCeEEEEEC
Confidence            358999999999987  4589999999985


No 22 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.76  E-value=1.6e-17  Score=154.50  Aligned_cols=204  Identities=18%  Similarity=0.069  Sum_probs=129.6

Q ss_pred             cceeeeeeecccCCCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhc----CCCchh
Q 016743           82 PALRSGEWSDIGDRTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVED----ADFPLD  157 (383)
Q Consensus        82 ~~~~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~----~~~~~~  157 (383)
                      +.+.+++..... +.-.-|.|-+...           ..+..+++|+||+|+...|.+++..+...+...    ......
T Consensus        36 ~~~~~~~~~~p~-~~vgGD~yd~~~~-----------~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~  103 (255)
T 3f79_A           36 EGLEFSHRIIPS-LYLSGDFVDYFRV-----------DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTL  103 (255)
T ss_dssp             TTEEEEEEEECS-SSSCSEEEEEEEE-----------TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred             CCEEEEEEEeEh-hhcCceEEeEEEe-----------CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            345555554433 4566788755543           145678999999997776666665554444221    000011


Q ss_pred             HHHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCC-ceEEEEeCCeeeecCCCCCCCChHHHHH
Q 016743          158 IEKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGD-CRAVLSRRGAAVELSEDHRPDCTKERMR  234 (383)
Q Consensus       158 ~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGD-SR~yl~r~g~~~~LT~DH~~~~~~E~~R  234 (383)
                      ....+.+.+..+|+.+.+.     ...+++|+++++++  .+.++++|+|+ ++.|++++|.+.+++.+|.|        
T Consensus       104 ~~~~p~~~l~~ln~~l~~~-----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~--------  170 (255)
T 3f79_A          104 PEFKPSEVLAHINRGLINT-----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP--------  170 (255)
T ss_dssp             ---CHHHHHHHHHHHHBTT-----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC------------
T ss_pred             ccCCHHHHHHHHHHHHHhc-----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce--------
Confidence            1222456777888888753     23699999999996  67999999999 56999999999999887753        


Q ss_pred             HHHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCChHH------
Q 016743          235 IQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTSQN------  308 (383)
Q Consensus       235 i~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~~e------  308 (383)
                                            +|-.              ....++...+++.++| .|+||||||++.++.++      
T Consensus       171 ----------------------lG~~--------------~~~~~~~~~~~l~~gd-~lll~TDGl~e~~~~~~~~~g~~  213 (255)
T 3f79_A          171 ----------------------VGLF--------------DDATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEA  213 (255)
T ss_dssp             -----------------------CCS--------------SCCCCCC---BCCSSE-EEEEECSCCCCCSCC---CCTTT
T ss_pred             ----------------------EEEc--------------CCCceEEEEEEECCCC-EEEEECCCcCcccCCCcchhhHH
Confidence                                  4532              1234556677888998 57799999999998877      


Q ss_pred             -HHHHHHHHHhccCCHHHHHHHHHHHHHHCCCCCceeEEEEEcc
Q 016743          309 -AVGFARRRLQEHNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFH  351 (383)
Q Consensus       309 -i~~~v~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~  351 (383)
                       +.+++...   ..+++.+++.|+ .+...+..||+|+++|+..
T Consensus       214 ~l~~~l~~~---~~~~~~~~~~l~-~~~~~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          214 SLPEQVAAA---GGTLDGLRQVFG-LANLAEMPDDIALLVLSRN  253 (255)
T ss_dssp             SSHHHHHHH---SCSSHHHHHHC------CCSSSCEEEEEEEEC
T ss_pred             HHHHHHHhc---CCCHHHHHHHHH-hccCCCCCCCEEEEEEEec
Confidence             77776542   346788888887 5677888999999999864


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.35  E-value=2e-10  Score=113.62  Aligned_cols=206  Identities=14%  Similarity=0.085  Sum_probs=123.5

Q ss_pred             CcceeeeeeecccC--CCCCCceEEEeecchhhhCCCCCCCCceEEEEEecCCCchHHHHHHHHhhhHHHhhcCCCchhH
Q 016743           81 VPALRSGEWSDIGD--RTYMEDTHVCISDLAKKFGNKLPGQEAISFYGVFDGHGGNGAAHFVREHLPRVIVEDADFPLDI  158 (383)
Q Consensus        81 ~~~~~~~~~s~~G~--R~~nED~~~v~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~aa~~a~~~l~~~l~~~~~~~~~~  158 (383)
                      +|.+.++.......  ..--=|.|-+...            .+..+++|+|++|..-.|.+++..+...|........++
T Consensus        33 ~~~~~~~~~y~P~~~~~~vgGD~y~~~~~------------~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p  100 (399)
T 3ke6_A           33 VPGADIAAEYLVAAEDTAAGGDWFDALAL------------GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTV  100 (399)
T ss_dssp             BTTEEEEEEEECSSSSCSCCSEEEEEEEC------------SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred             CCCeEEEEEEEECCCCCCCCCceEEEEEE------------CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            34555555444333  2344688877654            237899999999944333333333333332211111123


Q ss_pred             HHHHHHHHHHHhHHHHhhhccccccCCCceEEEEEEe--CCEEEEEEcCCceEEEEe-CCeeeecCCCCCCCChHHHHHH
Q 016743          159 EKVVTRSFIETDAALLKSCSIESALSSGTTALTAMIF--GRSLLVANAGDCRAVLSR-RGAAVELSEDHRPDCTKERMRI  235 (383)
Q Consensus       159 ~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~~li~--~~~l~vanvGDSR~yl~r-~g~~~~LT~DH~~~~~~E~~Ri  235 (383)
                      .    +.+..+|+ +....    ...+++|++++.++  .+.+.++++|..+.|+++ +|.+..+..++.+         
T Consensus       101 ~----~il~~ln~-~~~~~----~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~---------  162 (399)
T 3ke6_A          101 V----EALEAVDR-FHKQV----PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG---------  162 (399)
T ss_dssp             H----HHHHHHHH-HGGGS----TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC---------
T ss_pred             H----HHHHHHHH-HHHhc----CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc---------
Confidence            3    34445565 33221    22588999999987  679999999999999998 6777777665532         


Q ss_pred             HHcCCeeecCcccCcccccccccccccccccccCCCCCCceecceEEEEEecCCCeEEEEecccccCcCCh------HHH
Q 016743          236 QSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTS------QNA  309 (383)
Q Consensus       236 ~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~------~ei  309 (383)
                                          .+|-.                ...+...+.+.++|. |+|+||||.|....      +.+
T Consensus       163 --------------------plG~~----------------~~~~~~~~~l~~Gd~-l~l~TDGl~e~~~~~~~~g~~~l  205 (399)
T 3ke6_A          163 --------------------PLGSG----------------TGFPVRSEVLNIGDA-ILFYTDGLIERPGRPLEASTAEF  205 (399)
T ss_dssp             --------------------CTTSS----------------CCCCCEEEECCTTCE-EEEECTTTTSCTTCCHHHHHHHH
T ss_pred             --------------------ceECC----------------CCceeEEEEECCCCE-EEEECCCcccCCCCCcchhHHHH
Confidence                                24421                123446688999995 77999999998765      345


Q ss_pred             HHHHHHHHhc---------cCCHHHHHHHHHHHHHH-CCCCCceeEEEEEccCC
Q 016743          310 VGFARRRLQE---------HNDLKLCCKEMVKEAIK-RGGTDNLTIVMVSFHLE  353 (383)
Q Consensus       310 ~~~v~~~l~~---------~~~~~~~a~~Lv~~A~~-~g~~DNiTvIvv~l~~~  353 (383)
                      .+++......         ...++.+++.+++.... .+..||+|++++++...
T Consensus       206 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~~  259 (399)
T 3ke6_A          206 ADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRAP  259 (399)
T ss_dssp             HHHHHHHTC----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECCC
T ss_pred             HHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeCC
Confidence            5554432111         11233444454444333 45789999999999763


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.58  E-value=5.5e-07  Score=88.24  Aligned_cols=171  Identities=19%  Similarity=0.153  Sum_probs=95.7

Q ss_pred             CceEEEEEecCCC-chHHHHH---HHHhhhHHHhhcC----CCchhHHHHHHHHHHHHhHHHHhhhccccccCCCceEEE
Q 016743          120 EAISFYGVFDGHG-GNGAAHF---VREHLPRVIVEDA----DFPLDIEKVVTRSFIETDAALLKSCSIESALSSGTTALT  191 (383)
Q Consensus       120 ~~~~l~~V~DGhG-G~~aa~~---a~~~l~~~l~~~~----~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~GtT~~~  191 (383)
                      .+..+++|+|+.| |-.||-.   +...+...+....    ....++.    ..+..+|+.+...     ...+..|++.
T Consensus       201 ~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~l~~ln~~l~~~-----~~~~~~t~~~  271 (394)
T 3eq2_A          201 ERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPS----EVLAHINRGLINT-----KLGKHVTMLG  271 (394)
T ss_dssp             TTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHH----HHHHHHHHHHHHT-----TCCCCEEEEE
T ss_pred             CCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHH----HHHHHHHHHHhcc-----CcCcEEEEEE
Confidence            4567899999888 5554432   2222233332211    0111233    3455667777642     2247789999


Q ss_pred             EEEe--CCEEEEEEcCCce-EEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeecCcccCccccccccccccccccccc
Q 016743          192 AMIF--GRSLLVANAGDCR-AVLSRRGAAVELSEDHRPDCTKERMRIQSLGGYIDDGYLNGQLGVTRALGDWHLEGMKEM  268 (383)
Q Consensus       192 ~li~--~~~l~vanvGDSR-~yl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~g~l~ltralGd~~~k~~~~~  268 (383)
                      ++++  .+.+.++++|-.. .|+.++|.+..+.....                              .||-.        
T Consensus       272 ~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~------------------------------plG~~--------  313 (394)
T 3eq2_A          272 GVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL------------------------------PVGLF--------  313 (394)
T ss_dssp             EEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--------------------------------CCSCC--------
T ss_pred             EEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc------------------------------eeEec--------
Confidence            8887  6799999999754 67778888887764332                              24422        


Q ss_pred             CCCCCCceecceEEEEEecCCCeEEEEecccccCcCCh-------HHHHHHHHHHHhccCCHHHHHHHHHHHHHHC---C
Q 016743          269 GGRGGPLSAEPELKLVTLTNEDEFLIIGSDGIWDVFTS-------QNAVGFARRRLQEHNDLKLCCKEMVKEAIKR---G  338 (383)
Q Consensus       269 ~~~~~~~~~~Pdi~~~~l~~~d~fLIL~SDGlwd~l~~-------~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~---g  338 (383)
                            .........+.+.++| .|+|.||||.|....       +.+.+++..   ....    .+.+.+.....   .
T Consensus       314 ------~~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~---~~~~----~~~l~~~~~~~~~~~  379 (394)
T 3eq2_A          314 ------DDATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAA---AGGT----LDGLRQVFGLANLAE  379 (394)
T ss_dssp             ------CCC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTTTTSHHHHHT---TC------CHHHHHHHSCCCSCC
T ss_pred             ------CCCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhHHHHHHHHHh---cchh----HHHHHHHhcccCCCC
Confidence                  1123345668899999 477999999997443       334444332   1122    23343333221   2


Q ss_pred             CCCceeEEEEEcc
Q 016743          339 GTDNLTIVMVSFH  351 (383)
Q Consensus       339 ~~DNiTvIvv~l~  351 (383)
                      ..|++|+++++..
T Consensus       380 ~~DDit~l~i~~~  392 (394)
T 3eq2_A          380 MPDDIALLVLSRN  392 (394)
T ss_dssp             --CCCEEEEEC--
T ss_pred             CCCceEEEEEecc
Confidence            4699999999865


No 25 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=40.77  E-value=0.89  Score=46.09  Aligned_cols=80  Identities=5%  Similarity=-0.112  Sum_probs=57.5

Q ss_pred             ccccccccccccccccCCCCCCceecceEEEEEecC--CC----eEEEEecccccCcCChHHHHHHHHHHH-hccCCHHH
Q 016743          253 VTRALGDWHLEGMKEMGGRGGPLSAEPELKLVTLTN--ED----EFLIIGSDGIWDVFTSQNAVGFARRRL-QEHNDLKL  325 (383)
Q Consensus       253 ltralGd~~~k~~~~~~~~~~~~~~~Pdi~~~~l~~--~d----~fLIL~SDGlwd~l~~~ei~~~v~~~l-~~~~~~~~  325 (383)
                      ++||+|-.              ...+.++..+.+.+  |+    .|+ +++   ||++...++.+++...- ....+.+.
T Consensus        44 l~~~~~l~--------------~~~~~d~~~~~~~~~ig~~~~~~f~-~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~  105 (543)
T 3c4z_A           44 LSKCEALR--------------ESLDLGFEGMCLEQPIGKRLFQQFL-RTH---EQHGPALQLWKDIEDYDTADDALRPQ  105 (543)
T ss_dssp             GGGGHHHH--------------HHSCCCHHHHHTSSHHHHHHHHHHH-HHC---GGGHHHHHHHHHHHHHHTSCTTTHHH
T ss_pred             chHHHHHH--------------hccccCHHHhhccCcccHHHHHHHH-hcC---CchhHHHHHHhhhhhhccCchhhHHH
Confidence            78888733              13344555555556  66    566 455   88888888877776632 12347889


Q ss_pred             HHHHHHHHHHHCCCCCceeEE----EEEc
Q 016743          326 CCKEMVKEAIKRGGTDNLTIV----MVSF  350 (383)
Q Consensus       326 ~a~~Lv~~A~~~g~~DNiTvI----vv~l  350 (383)
                      .|+.|++.|+..++.||++++    +.++
T Consensus       106 ~~~~l~~~~~~~~~~d~~~~~~~~~v~~v  134 (543)
T 3c4z_A          106 KAQALRAAYLEPQAQLFCSFLDAETVARA  134 (543)
T ss_dssp             HHHHHHHHHTSTTCTTCCTTSCHHHHHHH
T ss_pred             HHHHHHHHhhCchhhhhhccCCHHHHhhh
Confidence            999999999999999999998    6666


No 26 
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=36.06  E-value=1.1e+02  Score=23.66  Aligned_cols=58  Identities=16%  Similarity=0.204  Sum_probs=45.2

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-+-+.++..++.+.+...+...  .-++..|+.+.+..+.   ...+.-+-|++.+..+|
T Consensus        44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~---~~~v~~v~V~v~Kp~ap  103 (119)
T 1nbu_A           44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD---DQRVHAVEVAVHKPQAP  103 (119)
T ss_dssp             HHCCGGGSCCHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHT---STTCCEEEEEEECTTCC
T ss_pred             ccccchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHhc---CCCccEEEEEEECCCCC
Confidence            4788999999999999998876543  4688899999998886   24577777777775554


No 27 
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=27.37  E-value=1.5e+02  Score=23.83  Aligned_cols=58  Identities=12%  Similarity=0.066  Sum_probs=43.8

Q ss_pred             ecccccCcCChHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQE--HNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~--~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+..  ..-++..|+.+.+..+..   ..+.-+-|++.+..+|
T Consensus        65 ~sDdl~~tvdY~~v~~~I~~~v~~~~~~LlE~lAe~Ia~~il~~---~~v~~v~V~V~Kp~a~  124 (143)
T 3v9o_A           65 VEDKLREVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLLAH---DAVRAVRVSTEKPDAY  124 (143)
T ss_dssp             SSCCGGGSCCTHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHSS---TTCCEEEEEEEETTSC
T ss_pred             CCccchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhc---CCccEEEEEEECCCCC
Confidence            467788889999999999987764  357889999999988864   4566666666664444


No 28 
>1z9w_A DHNA, dihydroneopterin aldolase; FOLB, structural genomics, TB ST genomics; 2.50A {Mycobacterium tuberculosis H37RV} SCOP: d.96.1.3
Probab=26.67  E-value=1.2e+02  Score=24.14  Aligned_cols=58  Identities=16%  Similarity=0.204  Sum_probs=44.5

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+...  .-++.+|+.+.+..+.   ...+.-+-|++.+..+|
T Consensus        44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~il~---~~~v~~v~V~v~Kp~ap  103 (133)
T 1z9w_A           44 NSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD---DQRVHAVEVAVHKPQAP  103 (133)
T ss_dssp             GCSSHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHH---STTEEEEEEEEEEECCC
T ss_pred             cccCchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhc---CCCccEEEEEEECCCCC
Confidence            4788888999999999998876543  4688999999998887   24577777777665444


No 29 
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=26.34  E-value=1.3e+02  Score=22.61  Aligned_cols=49  Identities=10%  Similarity=0.262  Sum_probs=37.9

Q ss_pred             CCCeEEEEecccccCcCChHHHHHHHHHHHhcc------------CCHHHHHHHHHHHHHH
Q 016743          288 NEDEFLIIGSDGIWDVFTSQNAVGFARRRLQEH------------NDLKLCCKEMVKEAIK  336 (383)
Q Consensus       288 ~~d~fLIL~SDGlwd~l~~~ei~~~v~~~l~~~------------~~~~~~a~~Lv~~A~~  336 (383)
                      ..|.|+||-.+-==..++.+|+...+...+.+.            .+.++.|+.|++.+.+
T Consensus         8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~CE   68 (94)
T 2krx_A            8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTSCE   68 (94)
T ss_dssp             CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHCCC
T ss_pred             ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHheee
Confidence            446688888765555789999999988888766            3578889999997754


No 30 
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=25.58  E-value=1.4e+02  Score=24.07  Aligned_cols=58  Identities=12%  Similarity=0.109  Sum_probs=43.6

Q ss_pred             ecccccCcCChHHHHHHHHHHHhc--cCCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQE--HNDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~--~~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+..  ..-++..|+.+.+..+..-.   +..+-|++.+...|
T Consensus        67 ~sDdl~~tvdY~~v~~~I~~~v~~~~f~LlE~LAe~Ia~~ll~~~~---v~~v~V~V~KP~a~  126 (143)
T 3r2e_A           67 GSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRRFN---SPWVRIKVSKPGAV  126 (143)
T ss_dssp             TCCCTTSSCCHHHHHHHHHHHHHSSEESCHHHHHHHHHHHHHHHHC---CSEEEEEEECTTSS
T ss_pred             cccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCC---ccEEEEEEECCCCC
Confidence            477888999999999999887753  35788999999998886533   66666677664333


No 31 
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=24.50  E-value=1.9e+02  Score=22.35  Aligned_cols=59  Identities=14%  Similarity=0.173  Sum_probs=44.0

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+...  .-++..|+.+.+..+..-  ..+.-+-|++.+..+|
T Consensus        44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~--~~v~~v~V~v~Kp~ap  104 (121)
T 1dhn_A           44 RTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQY--NRVMETKVRITKENPP  104 (121)
T ss_dssp             HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHHC--TTEEEEEEEEEESSCS
T ss_pred             ccCCccceeCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHC--CCceEEEEEEEcCCCC
Confidence            4788999999999999998876543  468889999999888742  2366666676664443


No 32 
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=23.79  E-value=1.2e+02  Score=23.51  Aligned_cols=58  Identities=12%  Similarity=0.076  Sum_probs=43.3

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+...  .-++..|+.+.+..+..   ..+.-+-|++.+..+|
T Consensus        47 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~---~~v~~v~V~v~Kp~a~  106 (120)
T 1b9l_A           47 TSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREH---HWVTYAEVEIDKLHAL  106 (120)
T ss_dssp             GGGTCSSCCCHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHTCS---TTCSEEEEEEEEETCS
T ss_pred             ccCCcccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhcc---CCceEEEEEEECCCCC
Confidence            4889999999999999998876543  57889999998887643   5566666666654443


No 33 
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=22.14  E-value=1.7e+02  Score=22.72  Aligned_cols=58  Identities=10%  Similarity=0.063  Sum_probs=43.6

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+...  .-++..|+.+.+..+..-.   +.-+-|++.+..+|
T Consensus        43 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~---v~~v~V~v~Kp~a~  102 (122)
T 2o90_A           43 KSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFN---SPWVRIKLSKPGAV  102 (122)
T ss_dssp             HHCCGGGSCCHHHHHHHHHHHHTTCEESCHHHHHHHHHHHHHHHSS---CSCEEEEEECTTSC
T ss_pred             cccccccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhhCC---ceEEEEEEECCCCC
Confidence            4788899999999999998876533  5788999999998887543   55566666664444


No 34 
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=20.84  E-value=2e+02  Score=23.20  Aligned_cols=59  Identities=14%  Similarity=0.186  Sum_probs=43.1

Q ss_pred             ecccccCcCChHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHCCCCCceeEEEEEccCCCCC
Q 016743          296 GSDGIWDVFTSQNAVGFARRRLQEH--NDLKLCCKEMVKEAIKRGGTDNLTIVMVSFHLEPPP  356 (383)
Q Consensus       296 ~SDGlwd~l~~~ei~~~v~~~l~~~--~~~~~~a~~Lv~~A~~~g~~DNiTvIvv~l~~~~~~  356 (383)
                      .||-|-+.++..++.+.+...+...  .-++.+|+.+.+..+..-  ..+.-+-|++.+..+|
T Consensus        63 ~sDdl~~tvdY~~v~~~I~~~v~~~~f~LiE~lA~~Ia~~il~~f--p~v~~v~V~V~Kp~a~  123 (146)
T 1sql_A           63 ESDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKF--HQINAVRVKLSKPNVA  123 (146)
T ss_dssp             HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHHHC--TTCCEEEEEEEESSCT
T ss_pred             cccCchhccCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHC--CCceEEEEEEECCcCC
Confidence            4788999999999999998876543  468899999999888742  2455555566554333


Done!