Query 016744
Match_columns 383
No_of_seqs 279 out of 1216
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 03:04:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016744.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016744hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f2ha4 c.1.8.13 (A:248-585) P 100.0 2.7E-50 2E-54 394.2 8.3 153 181-335 186-338 (338)
2 d2f2ha3 b.71.1.4 (A:586-665) P 99.6 4.9E-16 3.6E-20 120.9 3.3 46 336-381 1-46 (80)
3 d2f2ha2 b.30.5.11 (A:1-247) Pu 99.1 2.2E-11 1.6E-15 113.0 7.4 79 77-162 153-233 (247)
4 d1uasa2 c.1.8.1 (A:1-273) Meli 17.6 2.5E+02 0.018 22.9 11.2 87 197-286 147-246 (273)
5 d1szna2 c.1.8.1 (A:1-314) Meli 10.1 4.1E+02 0.03 21.5 10.6 61 196-259 187-255 (314)
6 d2pxrc1 a.73.1.1 (C:1-145) HIV 7.8 46 0.0034 26.3 0.4 11 269-279 127-137 (145)
7 d1aq0a_ c.1.8.3 (A:) Plant bet 6.0 5.3E+02 0.039 21.4 7.0 56 191-254 209-264 (306)
8 d1jt6a2 a.121.1.1 (A:73-187) M 5.8 1.7E+02 0.012 21.4 2.9 40 296-335 28-67 (115)
9 d1xkta_ c.69.1.22 (A:) Fatty a 5.6 2.2E+02 0.016 21.4 3.7 17 252-268 49-65 (286)
10 d1xl7a2 c.43.1.3 (A:393-610) P 5.4 3.5E+02 0.026 21.9 5.1 35 303-337 85-129 (218)
No 1
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.7e-50 Score=394.21 Aligned_cols=153 Identities=26% Similarity=0.513 Sum_probs=147.4
Q ss_pred hHHHHhhhHHHHHHHHHHHHHhhCCCCCCeEEEcccCcCCCccceeecCcCCCCchHHHHhHHHHHHhhccCCCccccCC
Q 016744 181 VSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDI 260 (383)
Q Consensus 181 ~~~~hn~yg~~~a~at~e~l~~~~~~~RpfvlsRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~l~~glsG~p~~g~DI 260 (383)
....||+|+++++++++|++++..+++|+|+++||+++|+|||+++|+||+.|+|++|+.+|+++|++|++|+||+|+||
T Consensus 186 ~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~Gsqry~~~W~GD~~s~w~~L~~~i~~~l~~~l~G~p~~g~Di 265 (338)
T d2f2ha4 186 PQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDI 265 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTTCCCEEEET
T ss_pred hhhhcchhHHHHHHHHHHHHHHhccccccceeeccccccccccceEecCCCCCChHHHHHHHHHHHHHHHcCCCccCCCc
Confidence 35689999999999999999998888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHhhccccceeccCCCCCCCCccccccCchHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCC
Q 016744 261 GGFAGNATPRLFGRWMGIGAMFPFCRGHTETDTIDHEPWSFGEECEEVCRLALKRRYRLLPHIYTLFYMAHTTGT 335 (383)
Q Consensus 261 gGf~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~f~~~~~~i~r~~i~lRy~LlPYlYt~~~~a~~~G~ 335 (383)
|||.+++++|||+||+|+|+|+|+||+|+.. .+++||.|++++++++|+++++||+|+|||||++++||++|.
T Consensus 266 gGf~~~~~~EL~~RW~q~~~f~P~~r~h~~~--~~~~Pw~~~~~~~~~~r~~~~lRy~LlPY~Ys~~~~a~~tGt 338 (338)
T d2f2ha4 266 GGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGT 338 (338)
T ss_dssp TCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHhcchheecCCCC--CCCCCccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999864 578999999999999999999999999999999999999995
No 2
>d2f2ha3 b.71.1.4 (A:586-665) Putative glucosidase YicI, domain 3 {Escherichia coli [TaxId: 562]}
Probab=99.56 E-value=4.9e-16 Score=120.93 Aligned_cols=46 Identities=15% Similarity=0.306 Sum_probs=45.3
Q ss_pred cccccccccCCCCccccccCCEEEecCCeeEeeeeecCcceEEeee
Q 016744 336 LVASPTFFADPEDLTLRKLENSFLLGPVLVCARFLFYSLDMTYLMT 381 (383)
Q Consensus 336 Pi~RPl~~~~P~D~~~~~~~~qfmlG~~LLVAPVl~~g~~~~~~~~ 381 (383)
||||||+|+||+|++++.+++|||+|++||||||+++++++++|||
T Consensus 1 Pi~RPl~~~~p~d~~~~~~~~Qfm~G~~lLVaPV~~~~~~~~vylP 46 (80)
T d2f2ha3 1 PMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLP 46 (80)
T ss_dssp CSEECHHHHSTTCGGGTTCCSCEEETTTEEECCCCSSSCEEEEEEC
T ss_pred CcccCccccCCCChhHhCCCcEEEEcCeEEEEEeeeCCcEEEEEcC
Confidence 8999999999999999999999999999999999999999999998
No 3
>d2f2ha2 b.30.5.11 (A:1-247) Putative glucosidase YicI, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.14 E-value=2.2e-11 Score=113.05 Aligned_cols=79 Identities=29% Similarity=0.557 Sum_probs=66.8
Q ss_pred EEecCCCCceeecCCCCCcccccCceeEeecCCCCCCCCCCCccccccceEEEEcCCCccceeeeccCccccccccccc-
Q 016744 77 KLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKES- 155 (383)
Q Consensus 77 ~ik~~~~~~~yG~Ge~~G~l~~~g~~~~~WntD~~~y~~~t~~LYqs~Pf~~~~~~~g~a~Gif~D~t~~~~~d~~~e~- 155 (383)
.++++.+|++||+||+.+.|+++|+++.+||+|.. ..++++|++|||+++. +.||||.||+.+..||++.+.
T Consensus 153 ~~~l~~~E~iyGlGEr~~~l~~~G~~~~~wN~D~g---~~~~~~Y~~iPf~~s~----~gyGvf~dn~~~~~~d~g~~~~ 225 (247)
T d2f2ha2 153 RLDLGVGETVYGLGERFTALVRNGQTVETWNRDGG---TSTEQAYKNIPFYMTN----RGYGVLVNHPQCVSFEVGSEKV 225 (247)
T ss_dssp EEECCTTCCEEEEEECCSCSSCTTEEEECCCCCCT---TSBSCCSEEEEEEEET----TSEEEEECCSSCCEEEESSSBT
T ss_pred EEEcCCCCeEEeccccCCcccccccEEEEEECCCC---cccCCcccccCEEEeC----CeEEEEEECCCCeEEEEccCCC
Confidence 34688999999999999999999999999999974 3568999999999973 579999999999999997654
Q ss_pred -ceeeecC
Q 016744 156 -TIQFIAP 162 (383)
Q Consensus 156 -~~~~~~~ 162 (383)
.+.+.++
T Consensus 226 ~~~~~~~~ 233 (247)
T d2f2ha2 226 SKVQFSVE 233 (247)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEc
Confidence 3444443
No 4
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=17.64 E-value=2.5e+02 Score=22.94 Aligned_cols=87 Identities=17% Similarity=0.183 Sum_probs=46.6
Q ss_pred HHHHHhhCCCCCCeEEEcccCcC------CCccceee--cCcCCCCchHHHHhHHHHHHhhccCCCccccCC----CCCC
Q 016744 197 YEGMKLADKDKRPFVLTRAGFIG------SQRYAATW--TGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDI----GGFA 264 (383)
Q Consensus 197 ~e~l~~~~~~~RpfvlsRs~~~G------~qry~~~W--~GD~~s~W~~L~~~i~~~l~~glsG~p~~g~DI----gGf~ 264 (383)
.+++++. .|++++.-+...+ ..+|+..| ++|....|+.++..+..........-+..-+|. -|..
T Consensus 147 ~~~l~~~---~r~~~~~~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~ 223 (273)
T d1uasa2 147 SNAMKTY---GKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNG 223 (273)
T ss_dssp HHHHHHH---CTTSEEEEESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSS
T ss_pred HHHHHHh---CCCcEEeecccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccCccccccCCC
Confidence 3444443 4677776654332 23566544 779999999988877766654433223333342 2222
Q ss_pred CCCChhHHHHHHhhccc-cceec
Q 016744 265 GNATPRLFGRWMGIGAM-FPFCR 286 (383)
Q Consensus 265 g~~~~EL~~RW~Q~gaf-~P~~R 286 (383)
+-+..|......-+.++ .|++-
T Consensus 224 ~~t~~E~rt~~al~~i~~~pL~i 246 (273)
T d1uasa2 224 GMSEAEYRSHFSIWALAKAPLLI 246 (273)
T ss_dssp SSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHhchhhh
Confidence 33455655443322333 47764
No 5
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}
Probab=10.13 E-value=4.1e+02 Score=21.50 Aligned_cols=61 Identities=13% Similarity=0.146 Sum_probs=32.1
Q ss_pred HHHHHHhhCCCCCCeEEEcccCcC------CCccceee--cCcCCCCchHHHHhHHHHHHhhccCCCccccC
Q 016744 196 TYEGMKLADKDKRPFVLTRAGFIG------SQRYAATW--TGDNVSNWEHLHMSISMVLQLGLSGQPFSGPD 259 (383)
Q Consensus 196 t~e~l~~~~~~~RpfvlsRs~~~G------~qry~~~W--~GD~~s~W~~L~~~i~~~l~~glsG~p~~g~D 259 (383)
..+++++. .+++++..+.+.+ ...|+..| ++|....|+.+...+....-.....-+++.+|
T Consensus 187 ~~~~l~~~---~~~~~i~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~D 255 (314)
T d1szna2 187 MRNALAKQ---SHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNLNSFKLNSVDFWGHND 255 (314)
T ss_dssp HHHHHHTS---SSCCEEEECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHHHHHHHHTCGGGCBTTBEEE
T ss_pred HHHHHHHh---CCCeEEEecCCCCCCchhhhhhcccceeecCCcccccchHHHHHHHHHHHHHHhcCCccCC
Confidence 44455443 4566666554332 23444433 67888899988766554443333333344444
No 6
>d2pxrc1 a.73.1.1 (C:1-145) HIV-1 capsid protein {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=7.75 E-value=46 Score=26.32 Aligned_cols=11 Identities=27% Similarity=0.966 Sum_probs=6.5
Q ss_pred hhHHHHHHhhc
Q 016744 269 PRLFGRWMGIG 279 (383)
Q Consensus 269 ~EL~~RW~Q~g 279 (383)
.++|.||+-+|
T Consensus 127 g~iykrWiilg 137 (145)
T d2pxrc1 127 GEIYKRWIILG 137 (145)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 35666666554
No 7
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}
Probab=6.04 E-value=5.3e+02 Score=21.45 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEcccCcCCCccceeecCcCCCCchHHHHhHHHHHHhhccCCC
Q 016744 191 LMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQP 254 (383)
Q Consensus 191 ~~a~at~e~l~~~~~~~RpfvlsRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~l~~glsG~p 254 (383)
.+..+.+.+|++......+++++-+||+-. |+...+=+..+..+..++.....|-|
T Consensus 209 a~~d~~~~al~~~~~~~k~ivI~EtGWPS~--------G~~~as~~na~~y~~~l~~~~~~gt~ 264 (306)
T d1aq0a_ 209 TTVDAFYTAMGKHGGSSVKLVVSESGWPSG--------GGTAATPANARFYNQHLINHVGRGTP 264 (306)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEECCCCSS--------SSTTCCHHHHHHHHHHHHHHTTTBCS
T ss_pred HHHHHHHHHHHHcCCCCCceEEeccccccC--------CCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 456667778877655556999999999953 45556666667777777665545544
No 8
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=5.79 E-value=1.7e+02 Score=21.37 Aligned_cols=40 Identities=10% Similarity=0.040 Sum_probs=32.1
Q ss_pred ccccccCchHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCC
Q 016744 296 HEPWSFGEECEEVCRLALKRRYRLLPHIYTLFYMAHTTGT 335 (383)
Q Consensus 296 ~ePw~f~~~~~~i~r~~i~lRy~LlPYlYt~~~~a~~~G~ 335 (383)
.|-|.-.....++.++..++|.+..-.+.....+..+.|.
T Consensus 28 ~EF~~~~~~~~e~~~~i~~lr~~y~~~~~~Ii~eGi~~G~ 67 (115)
T d1jt6a2 28 IEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGE 67 (115)
T ss_dssp HHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 4555544555677888889999999999999999999985
No 9
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.61 E-value=2.2e+02 Score=21.42 Aligned_cols=17 Identities=18% Similarity=0.016 Sum_probs=10.5
Q ss_pred CCCccccCCCCCCCCCC
Q 016744 252 GQPFSGPDIGGFAGNAT 268 (383)
Q Consensus 252 G~p~~g~DIgGf~g~~~ 268 (383)
+++.++.|.-|+....+
T Consensus 49 ~~~v~~~d~~g~~~~~~ 65 (286)
T d1xkta_ 49 SIPTYGLQCTRAAPLDS 65 (286)
T ss_dssp SSCEEEECCCTTSCCSC
T ss_pred CCeEEEEeCCCCCCCCC
Confidence 46777777777644333
No 10
>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.43 E-value=3.5e+02 Score=21.87 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=28.5
Q ss_pred chHHHHHHHHHHHHHhHH----------HHHHHHHHHHHhCCCcc
Q 016744 303 EECEEVCRLALKRRYRLL----------PHIYTLFYMAHTTGTLV 337 (383)
Q Consensus 303 ~~~~~i~r~~i~lRy~Ll----------PYlYt~~~~a~~~G~Pi 337 (383)
++..+..++|.+.|.+++ .+++.+-..+.+.|.|+
T Consensus 85 ~e~~~ll~~A~~~H~~~~~~a~~G~G~dRHL~~L~~~a~~~g~~~ 129 (218)
T d1xl7a2 85 LERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPV 129 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCCC
Confidence 356678889998887765 68899988888899987
Done!