Query 016746
Match_columns 383
No_of_seqs 105 out of 117
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 03:06:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016746.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016746hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ztda1 a.149.1.2 (A:2-125) Hy 24.3 24 0.0017 27.6 3.0 34 334-373 61-94 (124)
2 d2vv5a3 f.34.1.1 (A:27-112) Me 17.7 96 0.007 21.6 5.2 45 248-292 42-86 (86)
3 d2f06a1 d.58.18.11 (A:71-141) 15.8 28 0.002 24.4 1.6 19 41-59 50-68 (71)
4 d2pila_ d.24.1.1 (A:) Pilin Gc 12.0 1.3E+02 0.0096 21.7 4.8 25 276-300 6-30 (158)
5 d1fuoa_ a.127.1.1 (A:) Fumaras 10.4 2.9E+02 0.021 25.2 7.6 35 320-360 414-450 (456)
6 d2c4va1 c.23.13.1 (A:1-158) Ty 10.3 86 0.0062 25.5 3.2 26 350-375 23-49 (158)
7 d1esfa2 d.15.6.1 (A:121-233) S 9.6 73 0.0053 24.7 2.3 21 352-372 30-50 (113)
8 d2g9hd2 d.15.6.1 (D:87-216) En 8.7 82 0.006 25.0 2.3 20 352-371 34-53 (130)
9 d2es4d1 a.137.15.1 (D:53-332) 8.6 1.1E+02 0.0079 25.6 3.4 28 344-371 39-66 (280)
10 d1fnua2 d.15.6.1 (A:108-221) S 7.8 94 0.0069 24.0 2.3 20 352-371 33-52 (114)
No 1
>d1ztda1 a.149.1.2 (A:2-125) Hypothetical protein PF0609 {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.26 E-value=24 Score=27.59 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=22.3
Q ss_pred hHhhHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCCcc
Q 016746 334 QEVKEVIISFFILMEQGKATRQDLDLRCEELIKEEFGYYR 373 (383)
Q Consensus 334 Qe~KEaiLAY~~Ll~~g~~T~~~Ld~~~E~~L~~~fg~~v 373 (383)
-++.|+++||++| .|..|.+|- -+-+++.+..+|
T Consensus 61 Gd~aEA~iAyAWL--eg~it~eEa----vEilk~nl~~dv 94 (124)
T d1ztda1 61 GDYAEALIAKAWL--MGLISEREA----VEIIKKNLYPEV 94 (124)
T ss_dssp HHHHHHHHHHHHH--TTSSCHHHH----HHHHHTTCCGGG
T ss_pred cHHHHHHHHHHHH--hccchHHHH----HHHHHHhCcHHH
Confidence 4678999999999 577776542 234455555443
No 2
>d2vv5a3 f.34.1.1 (A:27-112) Mechanosensitive channel protein MscS (YggB), transmembrane region {Escherichia coli [TaxId: 562]}
Probab=17.68 E-value=96 Score=21.63 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=28.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH
Q 016746 248 PLDWVKFLVSAVVGLVAVITSAQLHEIDLWVGMAILSTVIGYCAK 292 (383)
Q Consensus 248 ~~D~~~l~v~avvg~v~~~~~l~~~~~d~~~i~a~ls~l~~~~~k 292 (383)
...++.-.+..+++++..+..++.+-+.+....++++..+|++.|
T Consensus 42 ~i~~~~~~~i~~i~~~~~L~~~Gi~~t~l~a~~G~~gvaiGfa~Q 86 (86)
T d2vv5a3 42 FLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQ 86 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcC
Confidence 344555555555666666677777766666667777766677653
No 3
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=15.77 E-value=28 Score=24.38 Aligned_cols=19 Identities=5% Similarity=0.347 Sum_probs=17.0
Q ss_pred hHHHHhhhcCCcccCHHHH
Q 016746 41 PFMQVMDKSNFKITTDEEI 59 (383)
Q Consensus 41 ~~~q~m~~anF~~ls~~e~ 59 (383)
.-.++|+++||+.++++|+
T Consensus 50 ~a~~~L~~~G~~vl~~~dl 68 (71)
T d2f06a1 50 KCIEVLKEKKVDLLAASDL 68 (71)
T ss_dssp HHHHHHHHTTCEEECHHHH
T ss_pred HHHHHHHHCCCEEEchHhe
Confidence 3579999999999999986
No 4
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=12.02 E-value=1.3e+02 Score=21.71 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016746 276 LWVGMAILSTVIGYCAKTYFTFQQN 300 (383)
Q Consensus 276 ~~~i~a~ls~l~~~~~k~~~~y~~~ 300 (383)
+.++++++++|.+.+.=.|.++.++
T Consensus 6 LlVViaIIgILaaia~P~~~~~~~~ 30 (158)
T d2pila_ 6 LMIVIAIVGILAAVALPAYQDYTAR 30 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666665543
No 5
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]}
Probab=10.43 E-value=2.9e+02 Score=25.23 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=21.9
Q ss_pred chhHHHHHHhHHHhh--HhhHHHHHHHHHhhcCCCCHHHHHHH
Q 016746 320 GKGTLLHLCDDVIQQ--EVKEVIISFFILMEQGKATRQDLDLR 360 (383)
Q Consensus 320 n~GvL~~L~d~AeeQ--e~KEaiLAY~~Ll~~g~~T~~~Ld~~ 360 (383)
++...+.++..|.++ .+||+.+ ..|.+|.++||+-
T Consensus 414 G~~~A~eia~~a~~~g~~lre~~~------~~~~ls~eeld~~ 450 (456)
T d1fuoa_ 414 GYDKAAEIAKKAHKEGLTLKAAAL------ALGYLSEAEFDSW 450 (456)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHH------HTTSSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCHHHHHH------HhCCCCHHHHHHh
Confidence 344455666666665 5677654 3566888887754
No 6
>d2c4va1 c.23.13.1 (A:1-158) Type II 3-dehydroquinate dehydratase {Helicobacter pylori [TaxId: 210]}
Probab=10.27 E-value=86 Score=25.46 Aligned_cols=26 Identities=12% Similarity=0.143 Sum_probs=21.9
Q ss_pred CCCCHHHHHHHHHHHHHHH-hCCcccc
Q 016746 350 GKATRQDLDLRCEELIKEE-FGYYRPV 375 (383)
Q Consensus 350 g~~T~~~Ld~~~E~~L~~~-fg~~v~F 375 (383)
|..|.+++++.|++|.+++ +|++++|
T Consensus 23 G~~TL~~i~~~~~~~a~~~~l~v~l~~ 49 (158)
T d2c4va1 23 GMVTLDQIHEIMQTFVKQGNLDVELEF 49 (158)
T ss_dssp TTCCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CccCHHHHHHHHHHHHHHcCCceehhh
Confidence 6789999999999999874 6777765
No 7
>d1esfa2 d.15.6.1 (A:121-233) Staphylococcal enterotoxin A, SEA {Staphylococcus aureus [TaxId: 1280]}
Probab=9.58 E-value=73 Score=24.70 Aligned_cols=21 Identities=33% Similarity=0.697 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHHHhCCc
Q 016746 352 ATRQDLDLRCEELIKEEFGYY 372 (383)
Q Consensus 352 ~T~~~Ld~~~E~~L~~~fg~~ 372 (383)
.|.||||-++..||.++.++-
T Consensus 30 VT~QElD~K~Rk~L~~~y~lY 50 (113)
T d1esfa2 30 VTVQELDLQARRYLQEKYNLY 50 (113)
T ss_dssp EEHHHHHHHHHHHHHHHHCTT
T ss_pred EeehhhhHHHHHHHHHhcccc
Confidence 799999999999999998753
No 8
>d2g9hd2 d.15.6.1 (D:87-216) Enterotoxin type I {Staphylococcus aureus [TaxId: 1280]}
Probab=8.70 E-value=82 Score=25.00 Aligned_cols=20 Identities=25% Similarity=0.584 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHHHHhCC
Q 016746 352 ATRQDLDLRCEELIKEEFGY 371 (383)
Q Consensus 352 ~T~~~Ld~~~E~~L~~~fg~ 371 (383)
+|.||||-++..||.+++++
T Consensus 34 VT~QElD~K~RkyL~~~~~L 53 (130)
T d2g9hd2 34 VTAQEIDVKLRRYLQEEYNI 53 (130)
T ss_dssp EEHHHHHHHHHHHHHHHHCT
T ss_pred EehhhhhHHHHHHHHHhccc
Confidence 79999999999999999874
No 9
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) {Burkholderia glumae [TaxId: 337]}
Probab=8.62 E-value=1.1e+02 Score=25.63 Aligned_cols=28 Identities=25% Similarity=0.293 Sum_probs=24.7
Q ss_pred HHHhhcCCCCHHHHHHHHHHHHHHHhCC
Q 016746 344 FILMEQGKATRQDLDLRCEELIKEEFGY 371 (383)
Q Consensus 344 ~~Ll~~g~~T~~~Ld~~~E~~L~~~fg~ 371 (383)
|||...|..|...++..+++++..+...
T Consensus 39 Yfls~~ge~~~~~~~a~v~~~i~~~l~~ 66 (280)
T d2es4d1 39 YCLTAQGELTPAALDALVRREIAAQLDG 66 (280)
T ss_dssp HHHTTGGGSCHHHHHHHHHHHHHHHHSS
T ss_pred HhccCCCCCCHHHHHHHHHHHHHhhCCC
Confidence 5888899999999999999999988753
No 10
>d1fnua2 d.15.6.1 (A:108-221) Streptococcal pyrogenic exotoxin A1 {Streptococcus pyogenes [TaxId: 1314]}
Probab=7.82 E-value=94 Score=24.03 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHHHHHHHhCC
Q 016746 352 ATRQDLDLRCEELIKEEFGY 371 (383)
Q Consensus 352 ~T~~~Ld~~~E~~L~~~fg~ 371 (383)
+|.||||-++..+|.++.++
T Consensus 33 VT~QElD~K~RkyL~~~y~L 52 (114)
T d1fnua2 33 VTAQELDYKVRKYTIDNKQL 52 (114)
T ss_dssp EEHHHHHHHHHHHHHHHHCS
T ss_pred EeeeehhHHHHHHHHHhccC
Confidence 79999999999999999874
Done!