Query 016748
Match_columns 383
No_of_seqs 129 out of 682
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 03:08:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 3E-129 1E-133 955.9 21.7 332 2-360 24-359 (379)
2 3mbd_A Fructose-bisphosphate a 100.0 2E-129 5E-134 948.8 18.8 333 2-363 4-339 (342)
3 3bv4_A Fructose-bisphosphate a 100.0 5E-127 2E-131 932.4 22.5 330 3-359 3-336 (341)
4 3mmt_A Fructose-bisphosphate a 100.0 2E-126 6E-131 928.7 21.0 326 7-359 4-335 (347)
5 2qap_A Fructose-1,6-bisphospha 100.0 5E-126 2E-130 937.5 23.3 330 4-360 37-370 (391)
6 2pc4_A 41 kDa antigen, fructos 100.0 7E-126 3E-130 931.4 21.4 331 3-360 13-347 (369)
7 2iqt_A Fructose-bisphosphate a 100.0 1E-94 3.5E-99 694.7 19.0 255 14-329 6-272 (296)
8 3apt_A Methylenetetrahydrofola 71.0 18 0.0006 34.5 9.1 159 8-188 27-210 (310)
9 3fst_A 5,10-methylenetetrahydr 68.3 23 0.00078 33.9 9.2 160 5-188 34-213 (304)
10 3iv3_A Tagatose 1,6-diphosphat 68.0 56 0.0019 32.0 12.1 169 26-219 26-206 (332)
11 3sy1_A UPF0001 protein YGGS; e 49.8 74 0.0025 29.1 9.0 101 84-196 104-211 (245)
12 2lmt_A Calmodulin-related prot 49.5 25 0.00085 28.0 5.1 47 1-51 1-47 (148)
13 3b8i_A PA4872 oxaloacetate dec 43.3 18 0.00061 34.6 3.8 46 119-182 163-208 (287)
14 2xw6_A MGS, methylglyoxal synt 34.5 50 0.0017 28.4 4.9 84 6-98 12-106 (134)
15 3qc0_A Sugar isomerase; TIM ba 29.0 1.3E+02 0.0045 25.8 6.8 60 122-185 81-144 (275)
16 3ngf_A AP endonuclease, family 28.1 1.2E+02 0.0042 26.5 6.5 60 123-184 92-151 (269)
17 1wdc_C Scallop myosin; calcium 27.7 1E+02 0.0036 23.8 5.4 49 3-55 2-52 (156)
18 3vni_A Xylose isomerase domain 26.2 2.1E+02 0.0073 24.9 7.7 91 89-185 52-153 (294)
19 2ovk_C Myosin catalytic light 25.7 1.8E+02 0.0061 22.6 6.5 65 3-78 2-68 (159)
20 1w7j_B Myosin light chain 1; m 24.4 74 0.0025 24.5 3.9 46 1-50 1-46 (151)
21 4do4_A Alpha-N-acetylgalactosa 22.5 98 0.0033 29.3 5.1 55 87-145 86-140 (400)
22 3gwq_A D-serine deaminase; str 22.2 1.5E+02 0.005 29.1 6.4 91 98-197 167-258 (426)
23 2yvq_A Carbamoyl-phosphate syn 21.9 56 0.0019 27.5 2.9 65 6-79 33-107 (143)
24 1b93_A Protein (methylglyoxal 21.5 66 0.0023 28.2 3.4 84 6-98 20-114 (152)
25 3i5g_C Myosin catalytic light 20.7 1.4E+02 0.0047 24.5 5.0 66 3-79 2-69 (159)
26 3tva_A Xylose isomerase domain 20.4 3.3E+02 0.011 23.7 7.8 59 122-185 100-160 (290)
27 1xg4_A Probable methylisocitra 20.4 1.4E+02 0.0049 28.4 5.7 38 120-164 163-200 (295)
28 3u0h_A Xylose isomerase domain 20.1 1.7E+02 0.0057 25.3 5.7 89 89-185 52-143 (281)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=2.9e-129 Score=955.87 Aligned_cols=332 Identities=47% Similarity=0.681 Sum_probs=322.2
Q ss_pred CcCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhhhcc
Q 016748 2 SAFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEETLYQ 81 (383)
Q Consensus 2 ~~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeETl~Q 81 (383)
.+++.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||+|++||||||||||||||
T Consensus 24 ~~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLftsp~~~~~IsGvILFeETl~Q 103 (379)
T 3kx6_A 24 VKLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQ 103 (379)
T ss_dssp SSCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTC
T ss_pred hhcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcCcccccceeEEEcchhhccc
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCC--CCCHHHH
Q 016748 82 KTSDGKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPT--EPSELSI 159 (383)
Q Consensus 82 k~~dG~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~--~PS~~aI 159 (383)
+++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|+++ +||..+|
T Consensus 104 k~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~aI 183 (379)
T 3kx6_A 104 QAPNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSI 183 (379)
T ss_dssp BCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHH
T ss_pred cccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977 9999999
Q ss_pred HHHHHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCC-CCC
Q 016748 160 QQNAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDS-PKV 238 (383)
Q Consensus 160 ~~Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~-~k~ 238 (383)
.+||++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||||||||||||||+||++| .|+
T Consensus 184 ~ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k~ 263 (379)
T 3kx6_A 184 LETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKP 263 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCC
T ss_pred HHHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 689
Q ss_pred ccCcCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCC-CCCCCcee
Q 016748 239 TLGLRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCP-TSCSGDCV 317 (383)
Q Consensus 239 t~~~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~-~~~~~~~~ 317 (383)
+ |++||++||+.| +|+||++||||+||||||||++|+.|+||||++ +.+|.-+|
T Consensus 264 s----------------------~eeVA~aTv~~L---~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsF 318 (379)
T 3kx6_A 264 A----------------------PQTVGFLTSRAL---RRTVPPALPGVMFLSGGQSESMATRHLNEINKCNKHPWSLSF 318 (379)
T ss_dssp C----------------------HHHHHHHHHHHH---HTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEE
T ss_pred C----------------------HHHHHHHHHHHH---HhcCCcccCcceecCCCCCHHHHHHHHHHHhhcCCCCcceee
Confidence 9 999999999999 899999999999999999999999999999985 77999999
Q ss_pred eeeehhccCCCCcccccccccccccchhhhhhhHhhhhhhhhc
Q 016748 318 FVRRAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQD 360 (383)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (383)
|+-||.|....+ .|.+..+||+|++.+++-||.....-.++
T Consensus 319 SyGRALQ~s~Lk--aW~Gk~eNv~aaQ~~l~~Ra~~Ns~A~~G 359 (379)
T 3kx6_A 319 SYGRALQSSVLK--TWNGSMSNAAAAQDVLMKLAQQNSEASLG 359 (379)
T ss_dssp EESHHHHHHHHH--HHTTCGGGHHHHHHHHHHHHHHHHHHTTT
T ss_pred echhhhchHHHH--HHhcCchhHHHHHHHHHHHHHhhhHHhcC
Confidence 999999999998 99999999999999999999876554443
No 2
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=1.5e-129 Score=948.80 Aligned_cols=333 Identities=32% Similarity=0.452 Sum_probs=321.8
Q ss_pred CcCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhhhcc
Q 016748 2 SAFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEETLYQ 81 (383)
Q Consensus 2 ~~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeETl~Q 81 (383)
+++++||++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||+|++||||||||||||||
T Consensus 4 ~~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILfeETl~q 83 (342)
T 3mbd_A 4 SMMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQ 83 (342)
T ss_dssp --CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGC
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcCcccccceeEEEcchhhccc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHH
Q 016748 82 KTSDGKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQ 161 (383)
Q Consensus 82 k~~dG~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~ 161 (383)
+++||+||+++|+++|||||||||||++|| +++|++|||||||++||++||++||+||||||||+|++++||+.+|.+
T Consensus 84 k~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~e 161 (342)
T 3mbd_A 84 TSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINE 161 (342)
T ss_dssp BCTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHH
T ss_pred cccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHHH
Confidence 999999999999999999999999999999 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCC-CCCcc
Q 016748 162 NAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDS-PKVTL 240 (383)
Q Consensus 162 Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~-~k~t~ 240 (383)
||++|||||+|||+|||||||||||||||||||++|++|||+||++||++|++|||||||||||||||+||++| .|++
T Consensus 162 na~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s- 240 (342)
T 3mbd_A 162 NCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYT- 240 (342)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCC-
T ss_pred HHHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 6899
Q ss_pred CcCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCCC--CCCCceee
Q 016748 241 GLRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCPT--SCSGDCVF 318 (383)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~~--~~~~~~~~ 318 (383)
|++||++||+.| +|+||++||||+||||||||++|+.|+||||+++ .+|.-+||
T Consensus 241 ---------------------~eeVA~~Tv~~L---~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFS 296 (342)
T 3mbd_A 241 ---------------------PKKVATFTLRAL---LSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFS 296 (342)
T ss_dssp ---------------------HHHHHHHHHHHH---HHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEE
T ss_pred ---------------------HHHHHHHHHHHH---HhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEe
Confidence 999999999999 8999999999999999999999999999999875 59999999
Q ss_pred eeehhccCCCCcccccccccccccchhhhhhhHhhhhhhhhccCc
Q 016748 319 VRRAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQDMGW 363 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (383)
+-||.|....+ .|.+..+|++|++.+++-||.....-.++.=|
T Consensus 297 ygRALQ~s~Lk--aW~Gk~env~aaQ~~l~~Ra~~N~~A~~Gky~ 339 (342)
T 3mbd_A 297 FARALTDGVLE--TWRGDDSNIEEAQKILLETSFKACRGAEGKLW 339 (342)
T ss_dssp ESHHHHHHHHH--HHTTCGGGHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred cchhhhhHHHH--HhcCCcccHHHHHHHHHHHHHHhhHHhCCCCc
Confidence 99999999998 99999999999999999999877666555444
No 3
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=5.4e-127 Score=932.44 Aligned_cols=330 Identities=48% Similarity=0.677 Sum_probs=320.2
Q ss_pred cCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcc-cCCceeEEeechhhhcc
Q 016748 3 AFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPN-ALSFLSGVILFEETLYQ 81 (383)
Q Consensus 3 ~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~-l~~~IsGVILfeETl~Q 81 (383)
.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||+ +++||||||||||||||
T Consensus 3 ~~~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~q 82 (341)
T 3bv4_A 3 ALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQ 82 (341)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhccc
Confidence 35789999999999999999999999999999999999999999999999999999999999 77999999999999999
Q ss_pred cccCCcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHH
Q 016748 82 KTSDGKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQ 161 (383)
Q Consensus 82 k~~dG~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~ 161 (383)
+++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|++++||+.+|.+
T Consensus 83 k~~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~~ 162 (341)
T 3bv4_A 83 KADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIME 162 (341)
T ss_dssp BCTTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHH
T ss_pred cCcCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCC-CCCcc
Q 016748 162 NAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDS-PKVTL 240 (383)
Q Consensus 162 Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~-~k~t~ 240 (383)
||++|||||+|||++||||||||||||||||||++|++||++||+++|++|++|+|||||||||||||+||++| .+++
T Consensus 163 na~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~- 241 (341)
T 3bv4_A 163 NANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYS- 241 (341)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCC-
T ss_pred HHHHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred CcCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCCCC--CCCceee
Q 016748 241 GLRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCPTS--CSGDCVF 318 (383)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~~~--~~~~~~~ 318 (383)
|++||++||+.| +|+||++||+|+|||||||+++|+.++||||.++. .|..+||
T Consensus 242 ---------------------~e~va~~Tv~~l---~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfS 297 (341)
T 3bv4_A 242 ---------------------HEEIAMATVTAL---RRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFS 297 (341)
T ss_dssp ---------------------HHHHHHHHHHHH---HTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEE
T ss_pred ---------------------HHHHHHHHHHHH---hhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEE
Confidence 999999999999 89999999999999999999999999999999765 7888899
Q ss_pred eeehhccCCCCcccccccccccccchhhhhhhHhhhhhhhh
Q 016748 319 VRRAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQ 359 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (383)
+-||.+....+ .|.+..+||+|++.+++-||+....-.+
T Consensus 298 ygRALq~~~lk--~W~Gk~env~aaQ~~l~~ra~~n~~A~~ 336 (341)
T 3bv4_A 298 YGRALQASALK--AWGGKKENLKAAQEEYVKRALANSLACQ 336 (341)
T ss_dssp ESHHHHHHHHH--HHTTCGGGHHHHHHHHHHHHHHHHHHTT
T ss_pred ehHHHhHHHHH--HhCCChhhHHHHHHHHHHHHHhhhHHhc
Confidence 99999999998 9999999999999999999987655443
No 4
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=1.7e-126 Score=928.74 Aligned_cols=326 Identities=41% Similarity=0.571 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccC-cccCCceeEEeechhhhcccccC
Q 016748 7 KYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTS-PNALSFLSGVILFEETLYQKTSD 85 (383)
Q Consensus 7 e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTt-p~l~~~IsGVILfeETl~Qk~~d 85 (383)
.+.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||++|||| |+|++||||||||||||||+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 35589999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeC-CCCCCHHHHHHHHH
Q 016748 86 GKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIG-PTEPSELSIQQNAQ 164 (383)
Q Consensus 86 G~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~-~~~PS~~aI~~Na~ 164 (383)
|+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++||+||||||||+|+ +++||..+|.+||+
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHHHCCceeeecceecCCC---CCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCCCCCccC
Q 016748 165 GLARYAIICQENGLVPIVEPEVLTDG---SHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDSPKVTLG 241 (383)
Q Consensus 165 ~LArYAaiCQ~~GLVPIVEPEVL~dG---dH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~~k~t~~ 241 (383)
+|||||+|||+||||||||||||||| ||||++|++||++||++||++|++|||||||||||||||+||++..|++
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~~~k~s-- 241 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKDARIAS-- 241 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTTSCCCC--
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCCCCcCC--
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999955888
Q ss_pred cCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCC-CCCCCceeeee
Q 016748 242 LRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCP-TSCSGDCVFVR 320 (383)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~-~~~~~~~~~~~ 320 (383)
|++||++||+.| +|+||++||||+|+||||||++|+.|+||||++ +.+|.-+||+-
T Consensus 242 --------------------~eevA~~Tv~~L---~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsFSyg 298 (347)
T 3mmt_A 242 --------------------VEEVAEKTVHVL---KQTVPAAVPGIAFLSGGQTDEEATAHLSAMNALGALPWKLTFSYG 298 (347)
T ss_dssp --------------------HHHHHHHHHHHH---HHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTSCCCSSEEEEEES
T ss_pred --------------------HHHHHHHHHHHH---HhhCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCeeeEeccc
Confidence 999999999999 899999999999999999999999999999984 77999999999
Q ss_pred ehhccCCCCcccccccccccccchhhhhhhHhhhhhhhh
Q 016748 321 RAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQ 359 (383)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (383)
||.|....+ .|.+..+||+|++.+++-||.....-.+
T Consensus 299 RALQ~s~Lk--aW~Gk~env~aaQ~~~~~Ra~~N~~A~~ 335 (347)
T 3mmt_A 299 RALQAAALK--AWAGKNENIVVAQKAFCHRARMNHLAAL 335 (347)
T ss_dssp HHHHHHHHH--HHTTCGGGHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHH--HhCCChhhHHHHHHHHHHHHHHhHHHHc
Confidence 999999998 9999999999999999999986654444
No 5
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=4.5e-126 Score=937.54 Aligned_cols=330 Identities=38% Similarity=0.551 Sum_probs=321.3
Q ss_pred CchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhhhcccc
Q 016748 4 FVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEETLYQKT 83 (383)
Q Consensus 4 ~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeETl~Qk~ 83 (383)
+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||++++||||||||||||||++
T Consensus 37 ~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILFeETl~Qk~ 116 (391)
T 2qap_A 37 LKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVGQKA 116 (391)
T ss_dssp CCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCBC
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecCCCccCceEEEEcchHhccCcC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHhCCccceeecCCCccccC-CCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHHH
Q 016748 84 SDGKPFVEVLQENNVIPGIKVDKGTVEIA-GTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQN 162 (383)
Q Consensus 84 ~dG~p~~~~L~~kGIvPGIKVDkGl~pl~-G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~N 162 (383)
+||+||+++|+++|||||||||||++||+ |+++|++|||||||++||++||++||+||||||||+|++++||+.+|.+|
T Consensus 117 ~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~PS~~aI~~n 196 (391)
T 2qap_A 117 SNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAVRFN 196 (391)
T ss_dssp TTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHHHHH
T ss_pred cCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCCCHHHHHHH
Confidence 99999999999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCC-CCCccC
Q 016748 163 AQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDS-PKVTLG 241 (383)
Q Consensus 163 a~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~-~k~t~~ 241 (383)
|++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|||||||||||||+||++| .|++
T Consensus 197 a~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~~~~k~s-- 274 (391)
T 2qap_A 197 AETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTAA-- 274 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCCC--
T ss_pred HHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCccccccCC--
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred cCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCCC--CCCCceeee
Q 016748 242 LRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCPT--SCSGDCVFV 319 (383)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~~--~~~~~~~~~ 319 (383)
|++||++||+.| +|+||++||+|+|||||||+++|+.+|||||.++ .+|+..||+
T Consensus 275 --------------------~eevA~~Tv~~L---~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSy 331 (391)
T 2qap_A 275 --------------------PEQVAHYTVMTL---ARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSY 331 (391)
T ss_dssp --------------------HHHHHHHHHHHH---HHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEE
T ss_pred --------------------HHHHHHHHHHHH---hhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEeh
Confidence 999999999999 9999999999999999999999999999999976 489999999
Q ss_pred eehhccCCCCcccccccccccccchhhhhhhHhhhhhhhhc
Q 016748 320 RRAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQD 360 (383)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (383)
-||.+....+ .|.+..+||+|++.+++-||+....-.++
T Consensus 332 gRALq~s~Lk--aW~Gk~eNv~aaQ~~l~~Ra~~Ns~A~~G 370 (391)
T 2qap_A 332 ARALQSSALK--AWGGKESGLAAGRRAFLHRARMNSMAQLG 370 (391)
T ss_dssp SHHHHHHHHH--HHTTSGGGHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhHHHHH--HhcCCchhHHHHHHHHHHHHHhchHhhCc
Confidence 9999999998 99999999999999999999876655544
No 6
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=7.3e-126 Score=931.35 Aligned_cols=331 Identities=45% Similarity=0.654 Sum_probs=322.0
Q ss_pred cCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhhhccc
Q 016748 3 AFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEETLYQK 82 (383)
Q Consensus 3 ~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeETl~Qk 82 (383)
.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||++++||||||||||||||+
T Consensus 13 ~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~tsp~~~~~IsGvILfeETl~qk 92 (369)
T 2pc4_A 13 KLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQK 92 (369)
T ss_dssp CCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTCB
T ss_pred CCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccCCCcccceEEEEcchHhccCc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCC--CCCCHHHHH
Q 016748 83 TSDGKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGP--TEPSELSIQ 160 (383)
Q Consensus 83 ~~dG~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~--~~PS~~aI~ 160 (383)
++||+||+++|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|++ ++||+.+|.
T Consensus 93 ~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~~PS~~aI~ 172 (369)
T 2pc4_A 93 NEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIH 172 (369)
T ss_dssp CTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHHH
T ss_pred CcCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCCCCCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCC-CCCc
Q 016748 161 QNAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDS-PKVT 239 (383)
Q Consensus 161 ~Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~-~k~t 239 (383)
+||++|||||+|||++||||||||||||||||||++|++||++||+++|++|++|+|||||||||||||+||++| .|++
T Consensus 173 ~na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~G~~~~~k~s 252 (369)
T 2pc4_A 173 ETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTT 252 (369)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCC
T ss_pred HHHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccccccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred cCcCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCC-CCCCCCceee
Q 016748 240 LGLRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNC-PTSCSGDCVF 318 (383)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~-~~~~~~~~~~ 318 (383)
|++||++||+.| +|+||++||+|+|||||||+++|+.++|+||+ ++.+|+.+||
T Consensus 253 ----------------------~e~vA~~Tv~~L---~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~~~PW~lsFS 307 (369)
T 2pc4_A 253 ----------------------TQDVGFLTVRTL---RRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFS 307 (369)
T ss_dssp ----------------------HHHHHHHHHHHH---HHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEE
T ss_pred ----------------------HHHHHHHHHHHH---HhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCCCCCceeEEe
Confidence 999999999999 99999999999999999999999999999997 4678999999
Q ss_pred eeehhccCCCCcccccccccccccchhhhhhhHhhhhhhhhc
Q 016748 319 VRRAERGRGHGESQCNEQARGVEAMDIVILIRASIAAEHTQD 360 (383)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (383)
+-||.+....+ .|.+..+||+|++.+++-||+....-.++
T Consensus 308 ygRALq~~~lk--~W~Gk~env~aaQ~~l~~ra~~n~~A~~G 347 (369)
T 2pc4_A 308 YGRALQASVLN--TWQGKKENVAKAREVLLQRAEANSLATYG 347 (369)
T ss_dssp ESHHHHHHHHH--TTTTCTTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHhhhhHHHH--HhCCChHHHHHHHHHHHHHHHhhhHHhcC
Confidence 99999999998 99999999999999999999877666554
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=1e-94 Score=694.66 Aligned_cols=255 Identities=24% Similarity=0.291 Sum_probs=239.3
Q ss_pred HHHHHhccCCCceEee-cCCCCchHHHhhhCCCCcchhh--------hhhhhhhhccCccc-CCceeEEeechhhhcccc
Q 016748 14 KNAKYIAAPGKGILAA-DESTGTIGKRLASINVENIESN--------RQVLRELLFTSPNA-LSFLSGVILFEETLYQKT 83 (383)
Q Consensus 14 ~tA~~ivapGKGILAA-DES~gTi~KRL~~iGVEnTEen--------Rr~yRelLfTtp~l-~~~IsGVILfeETl~Qk~ 83 (383)
....+.++|||||||| |||+|||+|||++||||||||| ||+||++|||||+| ++||||||||||||||++
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~ 85 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI 85 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC
Confidence 4556789999999987 9999999999999999999999 69999999999998 799999999999999985
Q ss_pred cCCcchHHHH-HhCCccceeecCCCccccC-CCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHH
Q 016748 84 SDGKPFVEVL-QENNVIPGIKVDKGTVEIA-GTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQ 161 (383)
Q Consensus 84 ~dG~p~~~~L-~~kGIvPGIKVDkGl~pl~-G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~ 161 (383)
||+||+++| +++|||||||||||++||+ |+++|++|||||||++||++|+++| |||||||+|++ ..+|.+
T Consensus 86 -dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~----~~aI~~ 157 (296)
T 2iqt_A 86 -EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN----EQGIRD 157 (296)
T ss_dssp -TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC----HHHHHH
T ss_pred -CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc----hhHHHH
Confidence 999999999 5999999999999999997 9999999999999999999997666 99999999984 999999
Q ss_pred HHHHHHHHHHHHHHCCceeeecceecCCCCCChhhHHHHHHHHHHHHHHHHhcCCccccccccccCCccCCCCCCCCccC
Q 016748 162 NAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVAPGSDSPKVTLG 241 (383)
Q Consensus 162 Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~~~~vte~VLa~v~~~L~~~~V~LeGtLLKPnMV~pG~~~~k~t~~ 241 (383)
||++|||||+|||++||||||||||||||+ |+++|++||++||+++|++|++ +||||||| ||++| +
T Consensus 158 na~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~---~-- 223 (296)
T 2iqt_A 158 IVEQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN---F-- 223 (296)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT---T--
T ss_pred HHHHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC---C--
Confidence 999999999999999999999999999999 9999999999999999999999 99999999 88887 4
Q ss_pred cCCCCCcchhhhhhhhhcCChHHHhhhhhcccceecccCCceeeeeeecCCCCCCccccccCCCCCCCCCCCCceeeeee
Q 016748 242 LRGLDGWAIDFQILFFLISSPEYWRRLRVTKEICVYFRGPTIVFCCCFTGGSRGDSRVHSDCTSSNCPTSCSGDCVFVRR 321 (383)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~p~~~a~~tv~~l~~~~~~vP~av~~~~f~~gg~~d~~a~~~~~~~n~~~~~~~~~~~~~~ 321 (383)
++++++ |++||+|+|+|||||+++|+.+||+||. -.||+-|
T Consensus 224 --------------------~~~va~-------------ppaVpgVvfLSGGqSeeeAt~~L~a~n~------l~fSfgR 264 (296)
T 2iqt_A 224 --------------------YKEIIE-------------HPMMLRVVALSGGYSREQANELLSRNHG------VIASFSR 264 (296)
T ss_dssp --------------------THHHHT-------------STTEEEEEEECTTCCHHHHHHHHTTSTT------CEEEESH
T ss_pred --------------------HHhhcC-------------CCCCCeeeeCCCCCCHHHHHHHHHhcCC------cEEEeHH
Confidence 566663 9999999999999999999999999995 5788999
Q ss_pred hhccCCCC
Q 016748 322 AERGRGHG 329 (383)
Q Consensus 322 ~~~~~~~~ 329 (383)
|.+.+-..
T Consensus 265 ALq~~l~~ 272 (296)
T 2iqt_A 265 ALVEGLSA 272 (296)
T ss_dssp HHHTTCCT
T ss_pred HhhChhhh
Confidence 99987655
No 8
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=71.03 E-value=18 Score=34.55 Aligned_cols=159 Identities=15% Similarity=0.180 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhccCC-CceEeecCCCCc-------hHHHhhhCCCCcch------hhhhhhhhhhccCcccC-Ccee--
Q 016748 8 YAEELIKNAKYIAAPG-KGILAADESTGT-------IGKRLASINVENIE------SNRQVLRELLFTSPNAL-SFLS-- 70 (383)
Q Consensus 8 ~~~eL~~tA~~ivapG-KGILAADES~gT-------i~KRL~~iGVEnTE------enRr~yRelLfTtp~l~-~~Is-- 70 (383)
-.+.|.+++++|..-+ ..|-..|=.+|+ +.++++.+|++.-. .||.+.++.|...-.++ +.|.
T Consensus 27 ~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaL 106 (310)
T 3apt_A 27 GEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLAL 106 (310)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 3566888999887633 677777866666 35667778988654 46777777766543333 3222
Q ss_pred -EEeech-----hhhcccccCCcchHHHHHhC-CccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceee
Q 016748 71 -GVILFE-----ETLYQKTSDGKPFVEVLQEN-NVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKW 143 (383)
Q Consensus 71 -GVILfe-----ETl~Qk~~dG~p~~~~L~~k-GIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKW 143 (383)
|=.--. ..-.. -.+..-+++++++. |- ....|+.--|. +....+.++...+++++..++||.|.==
T Consensus 107 rGD~p~~~g~~~~~~~~-f~~a~~Lv~~ir~~~g~----~f~igvA~yPE--~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iT 179 (310)
T 3apt_A 107 RGDPPRGERVFRPHPEG-FRYAAELVALIRERYGD----RVSVGGAAYPE--GHPESESLEADLRHFKAKVEAGLDFAIT 179 (310)
T ss_dssp CCCCSTTCCSCCCCTTS-CSSHHHHHHHHHHHHGG----GSEEEEEECTT--CCTTSSCHHHHHHHHHHHHHHHCSEEEE
T ss_pred cCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHhCCC----CeEEEEEeCCC--cCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 111100 00000 11334566777765 51 12333332231 2223567888889999999999996543
Q ss_pred eeEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeeecceecC
Q 016748 144 RAVLKIGPTEPSELSIQQNAQGLARYAIICQENGL-VPIVEPEVLT 188 (383)
Q Consensus 144 RaVi~I~~~~PS~~aI~~Na~~LArYAaiCQ~~GL-VPIVEPEVL~ 188 (383)
.-++ +++...+|...|++.|+ |||+ |-|++
T Consensus 180 Q~ff--------------D~~~~~~f~~~~r~~Gi~vPIi-~GImP 210 (310)
T 3apt_A 180 QLFF--------------NNAHYFGFLERARRAGIGIPIL-PGIMP 210 (310)
T ss_dssp CCCS--------------CHHHHHHHHHHHHHTTCCSCEE-CEECC
T ss_pred cccC--------------CHHHHHHHHHHHHHcCCCCeEE-EEecc
Confidence 3333 24678899999999996 6754 66654
No 9
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=68.25 E-value=23 Score=33.95 Aligned_cols=160 Identities=14% Similarity=0.128 Sum_probs=91.2
Q ss_pred chHHHHHHHHHHHHhccCC-CceEeecCCCCch-------HHHhh-hCCCCcch------hhhhhhhhhhccCcccC-Cc
Q 016748 5 VGKYAEELIKNAKYIAAPG-KGILAADESTGTI-------GKRLA-SINVENIE------SNRQVLRELLFTSPNAL-SF 68 (383)
Q Consensus 5 ~~e~~~eL~~tA~~ivapG-KGILAADES~gTi-------~KRL~-~iGVEnTE------enRr~yRelLfTtp~l~-~~ 68 (383)
+.+-.+.|.+++++|..-+ ..|-..|-.+|++ .+++. .+|+|.-. .||.+.++.|...-.++ +.
T Consensus 34 ~~~~~~~l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~n 113 (304)
T 3fst_A 34 TSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRH 113 (304)
T ss_dssp SHHHHHHHHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CccHHHHHHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCE
Confidence 3444556888999997644 3344447777763 34554 37877543 46777777766543333 33
Q ss_pred eeEE---eechhhhcccccCCcchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeee
Q 016748 69 LSGV---ILFEETLYQKTSDGKPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRA 145 (383)
Q Consensus 69 IsGV---ILfeETl~Qk~~dG~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRa 145 (383)
|.-+ .--.. .....+...+++++++.+ +. +.|+...|- +..-.+.++...+|+++..++||.|.-=.-
T Consensus 114 ILaLrGDpp~~~--~~~~~~A~dLv~~ir~~~---~f--~IgvA~yPE--~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ 184 (304)
T 3fst_A 114 IVALRGDLPPGS--GKPEMYASDLVTLLKEVA---DF--DISVAAYPE--VHPEAKSAQADLLNLKRKVDAGANRAITQF 184 (304)
T ss_dssp EEEECCCCC--------CCCHHHHHHHHHHHC---CC--EEEEEECTT--CCTTCSCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EEEecCCCCCCC--CCCCCCHHHHHHHHHHcC---CC--eEEEEeCCC--cCCCCCCHHHHHHHHHHHHHcCCCEEEeCc
Confidence 3211 10000 011234445677776542 22 234433331 223346788889999999999999932222
Q ss_pred EEeeCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeeecceecC
Q 016748 146 VLKIGPTEPSELSIQQNAQGLARYAIICQENGL-VPIVEPEVLT 188 (383)
Q Consensus 146 Vi~I~~~~PS~~aI~~Na~~LArYAaiCQ~~GL-VPIVEPEVL~ 188 (383)
++ +++...+|...|.+.|+ |||+ |-|++
T Consensus 185 ff--------------D~~~~~~f~~~~r~~Gi~vPIi-~GImP 213 (304)
T 3fst_A 185 FF--------------DVESYLRFRDRCVSAGIDVEII-PGILP 213 (304)
T ss_dssp CS--------------CHHHHHHHHHHHHHTTCCSCEE-CEECC
T ss_pred cC--------------CHHHHHHHHHHHHhcCCCCcEE-EEecc
Confidence 22 34567789999999996 6754 66664
No 10
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=67.96 E-value=56 Score=31.95 Aligned_cols=169 Identities=16% Similarity=0.183 Sum_probs=96.8
Q ss_pred eEeecCCCCchHHHhhhCCCCc-chhhhhhhhhhhccCcccCCceeEEeechhhhcccccCCcchHHHH-HhCCccceee
Q 016748 26 ILAADESTGTIGKRLASINVEN-IESNRQVLRELLFTSPNALSFLSGVILFEETLYQKTSDGKPFVEVL-QENNVIPGIK 103 (383)
Q Consensus 26 ILAADES~gTi~KRL~~iGVEn-TEenRr~yRelLfTtp~l~~~IsGVILfeETl~Qk~~dG~p~~~~L-~~kGIvPGIK 103 (383)
|||.|+. +++++-+++.|-.. +.+.-..+++++.. .+..+.+||+|..+ +.+.. .... .+.|++.++
T Consensus 26 ilA~DHR-~sl~~m~~~~~~~~~~~~~l~~~K~lv~~--~~~~~asaILlD~~-~G~~a------~~~~~~~~GLii~~- 94 (332)
T 3iv3_A 26 ALAFDQR-GALKCLMAQYQMKEPTVAQMEELKVLVSE--ELTPYASSILLDPE-YGLPA------AQARDREAGLLLAY- 94 (332)
T ss_dssp EEEECCS-HHHHHHHHTTTTSCCCHHHHHHHHHHHHH--HHGGGSSEEEECTT-TCHHH------HHTSCTTCEEEEEC-
T ss_pred EEEcCCh-hHHHHHHHhcCCCCCChHHHHHHHHHHHH--HHhcCCcEEEEchh-hCHHH------hccccCCCcEEEEe-
Confidence 4455986 56778888777442 34455678877743 35566788777655 33211 1111 466777655
Q ss_pred cCCCccccCCCC----CCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHH-HHHHHHHHHHHHHHHHCCc
Q 016748 104 VDKGTVEIAGTN----CETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSI-QQNAQGLARYAIICQENGL 178 (383)
Q Consensus 104 VDkGl~pl~G~~----~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI-~~Na~~LArYAaiCQ~~GL 178 (383)
++ +|.. +..+..=++.-.++++ ++||..-|-=.-+..+ . +..| .++-..+.|.+.-|++.|+
T Consensus 95 -E~-----~G~~~~~~gr~p~~l~~~sve~a~---~~GADAVk~lv~~g~d--~--~~e~~~~q~~~l~rv~~ec~~~Gi 161 (332)
T 3iv3_A 95 -EK-----TGYDANTTSRLPDCLVDWSIKRLK---EAGADAVKFLLYYDVD--G--DPQVNVQKQAYIERIGSECQAEDI 161 (332)
T ss_dssp -BC-----CCCCTTSSCCCCCBCTTCCHHHHH---HTTCSEEEEEEEECTT--S--CHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -cc-----CCCCcCCCCCCCccccccCHHHHH---HcCCCEEEEEEEcCCC--c--hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22 1111 1011111223355554 4799998865444332 2 2234 4678899999999999999
Q ss_pred eeeecceecC---CCCCChhhHHHHHHHHHHHHHHHHh--cCCccc
Q 016748 179 VPIVEPEVLT---DGSHDIKKCAAVTETVLAAVYKALN--DHHVLL 219 (383)
Q Consensus 179 VPIVEPEVL~---dGdH~ie~~~~vte~VLa~v~~~L~--~~~V~L 219 (383)
==++||=... .++||.+- +++...++....+... +.|+++
T Consensus 162 PlllEil~y~~~~~~~~~~~~-a~~~p~~V~~a~R~~~~~elGaDv 206 (332)
T 3iv3_A 162 PFFLEILTYDETISNNSSVEF-AKVKVHKVNDAMKVFSAERFGIDV 206 (332)
T ss_dssp CEEEEEEECBTTBSCTTSHHH-HTTHHHHHHHHHHHHTSGGGCCSE
T ss_pred ceEEEEeccCCCCCCCcchhh-hccCHHHHHHHHHHHhhcCcCCcE
Confidence 7788774433 34666553 3444555666667773 446654
No 11
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=49.77 E-value=74 Score=29.14 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=68.3
Q ss_pred cCCcchHHHHH----hCC--ccceeecCCCcccc-CCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCH
Q 016748 84 SDGKPFVEVLQ----ENN--VIPGIKVDKGTVEI-AGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSE 156 (383)
Q Consensus 84 ~dG~p~~~~L~----~kG--IvPGIKVDkGl~pl-~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~ 156 (383)
.|-....+.|. +.| +-.-||||+|-.+- -|.. + +-+..|.+++.+ ...=+++-+..+....++.
T Consensus 104 Vds~~~a~~l~~~a~~~~~~~~V~lqVntG~e~~R~G~~---~-ee~~~l~~~i~~-----~~~l~l~Glmt~~~~~~d~ 174 (245)
T 3sy1_A 104 IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQ---L-AELDELAAAVAE-----LPRLRLRGLSAIPAPESEY 174 (245)
T ss_dssp ECCHHHHHHHHHHSCTTSCCEEEEEEBCCSCTTCCSSBC---G-GGHHHHHHHHTT-----CTTEEEEEEECCCCCCSCH
T ss_pred cCCHHHHHHHHHHHHHcCCCceEEEEEECCCCcCCcCCC---H-HHHHHHHHHHHc-----CCCCeEEEEEEeCCCCCCH
Confidence 44445555553 223 44579999996532 2332 2 235556555533 3456888999998767778
Q ss_pred HHHHHHHHHHHHHHHHHHHCCceeeecceecCCCCCChhh
Q 016748 157 LSIQQNAQGLARYAIICQENGLVPIVEPEVLTDGSHDIKK 196 (383)
Q Consensus 157 ~aI~~Na~~LArYAaiCQ~~GLVPIVEPEVL~dGdH~ie~ 196 (383)
..+.+....|.+.+...++.+. + =+++.|-+.+|.+.
T Consensus 175 ~~~~~~f~~l~~l~~~l~~~~~-~--~~~LSmGmS~d~~~ 211 (245)
T 3sy1_A 175 VRQFEVARQMAVAFAGLKTRYP-H--IDTLALGQSDDMEA 211 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHTTST-T--CCEEECCCSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-C--CCEEeccCcHhHHH
Confidence 8888999999999988888875 3 37889988999663
No 12
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=49.55 E-value=25 Score=27.96 Aligned_cols=47 Identities=19% Similarity=0.301 Sum_probs=41.7
Q ss_pred CCcCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhh
Q 016748 1 MSAFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESN 51 (383)
Q Consensus 1 ~~~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEen 51 (383)
|+.+|.++.++|++.=+.+=.+|.|.|-.+| +...|+++|...+++.
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~E----l~~~l~~~~~~~~~~~ 47 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRE----LGTLMRTLGQNPTEAE 47 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGG----HHHHHHHHTCCCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHH----HHHHHHhcCCCchHHH
Confidence 7889999999999999999999999999988 6788889998887754
No 13
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=43.32 E-value=18 Score=34.57 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=31.4
Q ss_pred cCCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeee
Q 016748 119 TTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQNAQGLARYAIICQENGLVPIV 182 (383)
Q Consensus 119 ~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~Na~~LArYAaiCQ~~GLVPIV 182 (383)
...|||++.+|++.|.+.||+ +++ + ++.|+..-+ .++|++-. +|++
T Consensus 163 a~~gl~~ai~Ra~ay~eAGAd-----~i~-~-e~~~~~~~~----------~~i~~~~~-~P~i 208 (287)
T 3b8i_A 163 ELIDVDAVIQRTLAYQEAGAD-----GIC-L-VGVRDFAHL----------EAIAEHLH-IPLM 208 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCS-----EEE-E-ECCCSHHHH----------HHHHTTCC-SCEE
T ss_pred hhcCHHHHHHHHHHHHHcCCC-----EEE-e-cCCCCHHHH----------HHHHHhCC-CCEE
Confidence 346899999999999999987 232 3 235664333 44555554 7888
No 14
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=34.47 E-value=50 Score=28.36 Aligned_cols=84 Identities=21% Similarity=0.260 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHhccC--CCceEeecCCCCchHHHhhh-CCCCcchh------hhhhhhhhhccCcccCCceeEEeech
Q 016748 6 GKYAEELIKNAKYIAAP--GKGILAADESTGTIGKRLAS-INVENIES------NRQVLRELLFTSPNALSFLSGVILFE 76 (383)
Q Consensus 6 ~e~~~eL~~tA~~ivap--GKGILAADES~gTi~KRL~~-iGVEnTEe------nRr~yRelLfTtp~l~~~IsGVILfe 76 (383)
...|+++...|+++..- |-.|+| ++++++.|+. -|++-+.- .|.+.-++| -+..|.-||-|.
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-----~~geIdlVInt~ 82 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARV-----AEGRILAVIFFR 82 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHH-----HTTCEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHH-----HCCCccEEEEcc
Confidence 45789999999999999 999999 8999999998 89886543 333444444 237899999999
Q ss_pred hhh-ccc-ccCCcchHHHHHhCCc
Q 016748 77 ETL-YQK-TSDGKPFVEVLQENNV 98 (383)
Q Consensus 77 ETl-~Qk-~~dG~p~~~~L~~kGI 98 (383)
+-+ .|. ..||..+...--..+|
T Consensus 83 ~pl~~~~h~~D~~~IrR~A~~~~I 106 (134)
T 2xw6_A 83 DPLTAQPHEPDVQALLRVCDVHGV 106 (134)
T ss_dssp CTTTCCTTSCCSHHHHHHHHHHTC
T ss_pred CcccCCCccchHHHHHHHHHHcCC
Confidence 822 554 5677666554434443
No 15
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.99 E-value=1.3e+02 Score=25.79 Aligned_cols=60 Identities=17% Similarity=0.181 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHhHcCCcceeeeeEEeeC---C-CCCCHHHHHHHHHHHHHHHHHHHHCCceeeecce
Q 016748 122 GFDSLGARCQQYYKAGARFAKWRAVLKIG---P-TEPSELSIQQNAQGLARYAIICQENGLVPIVEPE 185 (383)
Q Consensus 122 GLDgL~eR~~~y~~~GArFAKWRaVi~I~---~-~~PS~~aI~~Na~~LArYAaiCQ~~GLVPIVEPE 185 (383)
.++.+..-+....++||..-. +..+ . ..+.+.++...++.|.+.+.++++.|+.--+||.
T Consensus 81 ~~~~~~~~i~~a~~lG~~~v~----~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 81 AIDDNRRAVDEAAELGADCLV----LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSCEE----EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCEEE----EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 345555555555667875432 2221 1 1345778899999999999999999999999983
No 16
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=28.15 E-value=1.2e+02 Score=26.45 Aligned_cols=60 Identities=13% Similarity=0.030 Sum_probs=40.7
Q ss_pred chHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeeecc
Q 016748 123 FDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQNAQGLARYAIICQENGLVPIVEP 184 (383)
Q Consensus 123 LDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~Na~~LArYAaiCQ~~GLVPIVEP 184 (383)
++.+.+-+....++||..-..-.- ...+.+.+.++...++.|.+.+..+++.|+.-.+||
T Consensus 92 ~~~~~~~i~~A~~lGa~~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 92 RDNVDIALHYALALDCRTLHAMSG--ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCBC--BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 444544444455678754322111 123345677889999999999999999999999998
No 17
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=27.66 E-value=1e+02 Score=23.81 Aligned_cols=49 Identities=8% Similarity=0.099 Sum_probs=39.0
Q ss_pred cCchHHHHHHHHHHHHhcc--CCCceEeecCCCCchHHHhhhCCCCcchhhhhhh
Q 016748 3 AFVGKYAEELIKNAKYIAA--PGKGILAADESTGTIGKRLASINVENIESNRQVL 55 (383)
Q Consensus 3 ~~~~e~~~eL~~tA~~iva--pGKGILAADES~gTi~KRL~~iGVEnTEenRr~y 55 (383)
.++.++..+|...=+.+=. ++.|.|-.+| +.+.|.++|...+++.-..+
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~e----l~~~l~~~g~~~~~~~~~~l 52 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFK----LGDVCRCLGINPRNEDVFAV 52 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGG----HHHHHHHTTCCCCHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHH----HHHHHHHcCCCCCHHHHHHH
Confidence 4678889999999999988 9999998877 67888889988776544444
No 18
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=26.19 E-value=2.1e+02 Score=24.94 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=53.3
Q ss_pred hHHHHHhCCccceeecCCCccc-----cCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEee------CCCCCCHH
Q 016748 89 FVEVLQENNVIPGIKVDKGTVE-----IAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKI------GPTEPSEL 157 (383)
Q Consensus 89 ~~~~L~~kGIvPGIKVDkGl~p-----l~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I------~~~~PS~~ 157 (383)
+.+.+++.|+-+-. ...| +.+.+.+.....++.+..-+....++||..-. .++.- ....+.+.
T Consensus 52 ~~~~l~~~gl~i~~----~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~--~~~~~~~~~~~~~~~~~~~ 125 (294)
T 3vni_A 52 LKACAHGNGITLTV----GHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIG--GALYSYWPIDYTKTIDKKG 125 (294)
T ss_dssp HHHHHHHTTCEEEE----EECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEE--ESTTSCSSCCTTSCCCHHH
T ss_pred HHHHHHHcCCeEEE----eecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeee--ccccCCCCCcCCCCCCHHH
Confidence 56777788875543 1111 11111111223344444444445567876432 11211 11234577
Q ss_pred HHHHHHHHHHHHHHHHHHCCceeeecce
Q 016748 158 SIQQNAQGLARYAIICQENGLVPIVEPE 185 (383)
Q Consensus 158 aI~~Na~~LArYAaiCQ~~GLVPIVEPE 185 (383)
++...++.|.+.+..+++.|+.-.+||-
T Consensus 126 ~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 126 DWERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 8899999999999999999999999985
No 19
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=25.73 E-value=1.8e+02 Score=22.61 Aligned_cols=65 Identities=15% Similarity=0.101 Sum_probs=46.8
Q ss_pred cCchHHHHHHHHHHHHhc--cCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhh
Q 016748 3 AFVGKYAEELIKNAKYIA--APGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEET 78 (383)
Q Consensus 3 ~~~~e~~~eL~~tA~~iv--apGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeET 78 (383)
.++.++.++|.++=+.+= .++.|.|-.+| +.+.|..+|...++..- .+++-... -+ .|.|-|+|=
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~e----l~~~l~~lg~~~~~~~~---~~l~~~~d-~~---~g~i~~~eF 68 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAK----VGDLLRCLGMNPTEAQV---HQHGGTKK-MG---EKAYKLEEI 68 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSEEEGGG----HHHHHHHTTCCCCHHHH---HHTTCCSS-TT---SCEEEHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCcHHH----HHHHHHHcCCCCCHHHH---HHHHHHhc-CC---CCeEcHHHH
Confidence 568899999999999987 99999999877 67888999988776433 22221111 11 377877774
No 20
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=24.35 E-value=74 Score=24.46 Aligned_cols=46 Identities=15% Similarity=0.238 Sum_probs=31.6
Q ss_pred CCcCchHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchh
Q 016748 1 MSAFVGKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIES 50 (383)
Q Consensus 1 ~~~~~~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEe 50 (383)
|..++.++.++|...=+.+=.++.|.|-.+| +.+.|..+|...++.
T Consensus 1 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~ 46 (151)
T 1w7j_B 1 MIEFNKDQLEEFKEAFELFDRVGDGKILYSQ----CGDVMRALGQNPTNA 46 (151)
T ss_dssp ----------CHHHHHHHHCCSSSSEEESTT----HHHHHHHTTCCCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCCCHH
Confidence 4567888889999999999999999998887 778889999887754
No 21
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=22.52 E-value=98 Score=29.26 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=41.9
Q ss_pred cchHHHHHhCCccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeee
Q 016748 87 KPFVEVLQENNVIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRA 145 (383)
Q Consensus 87 ~p~~~~L~~kGIvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRa 145 (383)
++++++++++|+-+||=.|-|.....|.++. .++-...-++.|.+-|..|=|+-.
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~----~~~~~~~da~~~a~wGvdylK~D~ 140 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGT----TLDKVVQDAQTFAEWKVDMLKLDG 140 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCB----CGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCch----hHhHHHHHHHHHHHhCCceEeecc
Confidence 4789999999999999999998766555431 355555567778888999988753
No 22
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=22.21 E-value=1.5e+02 Score=29.06 Aligned_cols=91 Identities=10% Similarity=-0.044 Sum_probs=55.5
Q ss_pred ccceeecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCc-ceeeeeEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 016748 98 VIPGIKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGAR-FAKWRAVLKIGPTEPSELSIQQNAQGLARYAIICQEN 176 (383)
Q Consensus 98 IvPGIKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GAr-FAKWRaVi~I~~~~PS~~aI~~Na~~LArYAaiCQ~~ 176 (383)
+=.-||||.|..- .|. .+.+-+..|.++++++ . .-+.+-+........+...+.+..+.+.+.+...++.
T Consensus 167 ~~V~l~VdtG~~R-~Gv---~~~~e~~~l~~~i~~~-----~~~l~l~Gl~th~g~~~~~~~~~~~~~~l~~l~~~L~~~ 237 (426)
T 3gwq_A 167 LQVLLELGVPGGR-TGV---RDAAQRNAVLEAITRY-----PDTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQ 237 (426)
T ss_dssp EEEEEEECCTTSS-SSB---CSHHHHHHHHHHHHTS-----TTTEEEEEEEECGGGCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCc-CCC---CCHHHHHHHHHHHHcC-----CCCEEEEeEEEEccccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 4457999999421 222 2112344555554432 2 3466677766543455667888888888888888888
Q ss_pred CceeeecceecCCCCCChhhH
Q 016748 177 GLVPIVEPEVLTDGSHDIKKC 197 (383)
Q Consensus 177 GLVPIVEPEVL~dGdH~ie~~ 197 (383)
|+.++--|++.|-|..+.+..
T Consensus 238 g~~~~~~~~lS~G~S~~~~~a 258 (426)
T 3gwq_A 238 ERFARAPAVLSGAGSAWYDVV 258 (426)
T ss_dssp TCCSSSSEEEEECCSTTHHHH
T ss_pred CCCCCCCCEEEecCChhHHHH
Confidence 864332356778888886533
No 23
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=21.87 E-value=56 Score=27.47 Aligned_cols=65 Identities=15% Similarity=0.181 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHhccCCCceEeecCCCCchHHHhhhCCCCcchhh------h----hhhhhhhccCcccCCceeEEeec
Q 016748 6 GKYAEELIKNAKYIAAPGKGILAADESTGTIGKRLASINVENIESN------R----QVLRELLFTSPNALSFLSGVILF 75 (383)
Q Consensus 6 ~e~~~eL~~tA~~ivapGKGILAADES~gTi~KRL~~iGVEnTEen------R----r~yRelLfTtp~l~~~IsGVILf 75 (383)
...|+++...|+++..-|=-|+|. +.+.+.|+..||+-+.-+ | ....++| -+..|.-||-+
T Consensus 33 d~dK~~l~~~a~~l~~lGf~i~AT----~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-----~~g~i~lVInt 103 (143)
T 2yvq_A 33 QSFRPRFLGVAEQLHNEGFKLFAT----EATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-----RDGSIDLVINL 103 (143)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEEE----HHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHH-----HTTSCCEEEEC
T ss_pred ccchHHHHHHHHHHHHCCCEEEEC----chHHHHHHHcCCeEEEEEeccCCCcccccccHHHHH-----HCCCceEEEEC
Confidence 356889999999999999988984 566899999998875532 3 3344443 12567777766
Q ss_pred hhhh
Q 016748 76 EETL 79 (383)
Q Consensus 76 eETl 79 (383)
.+..
T Consensus 104 ~~~~ 107 (143)
T 2yvq_A 104 PNNN 107 (143)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 24
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=21.47 E-value=66 Score=28.19 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHhccC--CCceEeecCCCCchHHHhhh-CCCCcchh------hhhhhhhhhccCcccCCceeEEeech
Q 016748 6 GKYAEELIKNAKYIAAP--GKGILAADESTGTIGKRLAS-INVENIES------NRQVLRELLFTSPNALSFLSGVILFE 76 (383)
Q Consensus 6 ~e~~~eL~~tA~~ivap--GKGILAADES~gTi~KRL~~-iGVEnTEe------nRr~yRelLfTtp~l~~~IsGVILfe 76 (383)
...|+++...|+++..- |-.|+| ++++++.|+. -|++-+.- .|.+.-++| -+..|.-||-|.
T Consensus 20 D~dK~~~v~~ak~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-----~~geIdlVInt~ 90 (152)
T 1b93_A 20 DHCKQMLMSWVERHQPLLEQHVLYA----TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALI-----SEGKIDVLIFFW 90 (152)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSEEEE----ETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHH-----HTTCCCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHHhCceeEEEEecCCCCCchHHHHH-----HCCCccEEEEcC
Confidence 45789999999999999 999999 8999999999 99987543 333444444 237899999999
Q ss_pred hhh-ccc-ccCCcchHHHHHhCCc
Q 016748 77 ETL-YQK-TSDGKPFVEVLQENNV 98 (383)
Q Consensus 77 ETl-~Qk-~~dG~p~~~~L~~kGI 98 (383)
+-| .|. ..||..+...--..+|
T Consensus 91 ~pl~~~~h~~D~~~IrR~A~~~~I 114 (152)
T 1b93_A 91 DPLNAVPHDPDVKALLRLATVWNI 114 (152)
T ss_dssp CTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred CcccCCcccccHHHHHHHHHHcCC
Confidence 833 443 3455444433334443
No 25
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=20.66 E-value=1.4e+02 Score=24.47 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=45.9
Q ss_pred cCchHHHHHHHHHHHHhc--cCCCceEeecCCCCchHHHhhhCCCCcchhhhhhhhhhhccCcccCCceeEEeechhhh
Q 016748 3 AFVGKYAEELIKNAKYIA--APGKGILAADESTGTIGKRLASINVENIESNRQVLRELLFTSPNALSFLSGVILFEETL 79 (383)
Q Consensus 3 ~~~~e~~~eL~~tA~~iv--apGKGILAADES~gTi~KRL~~iGVEnTEenRr~yRelLfTtp~l~~~IsGVILfeETl 79 (383)
.+|.++.++|++.=+.+= ..+.|.|-.+| +...|+++|+..|++.-+. ++ ..... =+|.|=|+|=+
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~E----l~~~lr~lG~~~t~~el~~---~~-~~d~~---~~g~i~f~eFl 69 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAK----VGDLLRCLGMNPTEAQVHQ---HG-GTKKM---GEKAYKLEEIL 69 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGG----HHHHHHHTTCCCCHHHHHT---TT-CCSST---TSCEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHH----HHHHHHHcCCCCCHHHHHH---HH-ccccc---CCCcccHHHHH
Confidence 478899999988766653 37889998877 7889999999988764333 32 22111 15777777754
No 26
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.42 E-value=3.3e+02 Score=23.72 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=40.6
Q ss_pred CchHHHHHHHHHhHcCCcceeeeeEEeeCCCCC--CHHHHHHHHHHHHHHHHHHHHCCceeeecce
Q 016748 122 GFDSLGARCQQYYKAGARFAKWRAVLKIGPTEP--SELSIQQNAQGLARYAIICQENGLVPIVEPE 185 (383)
Q Consensus 122 GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~P--S~~aI~~Na~~LArYAaiCQ~~GLVPIVEPE 185 (383)
.++.+.+-+....++||..-. +..+ ..| ++..+...++.|.+.+.++.+.|+.--+||-
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~----~~~G-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIG----LHIG-FVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE----ECCC-CCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEE----EcCC-CCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 455555555555667875432 2111 122 4567888889999999999999999999995
No 27
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=20.38 E-value=1.4e+02 Score=28.35 Aligned_cols=38 Identities=29% Similarity=0.295 Sum_probs=25.7
Q ss_pred CCCchHHHHHHHHHhHcCCcceeeeeEEeeCCCCCCHHHHHHHHH
Q 016748 120 TQGFDSLGARCQQYYKAGARFAKWRAVLKIGPTEPSELSIQQNAQ 164 (383)
Q Consensus 120 T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~~~~PS~~aI~~Na~ 164 (383)
..|||.+.+|++.|.+.||+ .|-+ ++.|+..-+.+.++
T Consensus 163 ~~gl~~ai~ra~ay~eAGAd------~i~~-e~~~~~~~~~~i~~ 200 (295)
T 1xg4_A 163 VEGLDAAIERAQAYVEAGAE------MLFP-EAITELAMYRQFAD 200 (295)
T ss_dssp HHCHHHHHHHHHHHHHTTCS------EEEE-TTCCSHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHcCCC------EEEE-eCCCCHHHHHHHHH
Confidence 45889999999999999986 2333 34576544444333
No 28
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=20.14 E-value=1.7e+02 Score=25.26 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=52.8
Q ss_pred hHHHHHhCCccce-eecCCCccccCCCCCCccCCCchHHHHHHHHHhHcCCcceeeeeEEeeC--CCCCCHHHHHHHHHH
Q 016748 89 FVEVLQENNVIPG-IKVDKGTVEIAGTNCETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIG--PTEPSELSIQQNAQG 165 (383)
Q Consensus 89 ~~~~L~~kGIvPG-IKVDkGl~pl~G~~~Ek~T~GLDgL~eR~~~y~~~GArFAKWRaVi~I~--~~~PS~~aI~~Na~~ 165 (383)
+.+.|++.|+-+- +=... .+.+ +.+.....++.+.+-+....++||..-. +.+. ...|....+...++.
T Consensus 52 ~~~~l~~~gl~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~i~~A~~lG~~~v~----~~~~p~~~~~~~~~~~~~~~~ 123 (281)
T 3u0h_A 52 VEAMFQRRGLVLANLGLPL---NLYD-SEPVFLRELSLLPDRARLCARLGARSVT----AFLWPSMDEEPVRYISQLARR 123 (281)
T ss_dssp HHHHHHTTTCEECCEECCS---CTTS-CHHHHHHHHHTHHHHHHHHHHTTCCEEE----EECCSEESSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEecccc---cccC-CCHHHHHHHHHHHHHHHHHHHcCCCEEE----EeecCCCCCcchhhHHHHHHH
Confidence 5677778876532 21110 1111 1111223344444445555668976532 1121 124567788899999
Q ss_pred HHHHHHHHHHCCceeeecce
Q 016748 166 LARYAIICQENGLVPIVEPE 185 (383)
Q Consensus 166 LArYAaiCQ~~GLVPIVEPE 185 (383)
|.+.+..+++.|+.--+||-
T Consensus 124 l~~l~~~a~~~Gv~l~lE~~ 143 (281)
T 3u0h_A 124 IRQVAVELLPLGMRVGLEYV 143 (281)
T ss_dssp HHHHHHHHGGGTCEEEEECC
T ss_pred HHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999985
Done!