Query 016751
Match_columns 383
No_of_seqs 151 out of 1475
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 03:11:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.7 4.5E-14 1.5E-18 129.7 27.2 238 89-352 16-283 (315)
2 2woz_A Kelch repeat and BTB do 99.7 5.6E-14 1.9E-18 129.2 27.3 236 89-352 27-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.7 1.1E-13 3.7E-18 126.5 27.7 237 88-353 26-279 (306)
4 2xn4_A Kelch-like protein 2; s 99.6 1.1E-13 3.9E-18 126.1 26.0 236 89-353 33-283 (302)
5 2vpj_A Kelch-like protein 12; 99.6 1.9E-13 6.5E-18 124.5 27.2 235 89-353 34-285 (301)
6 1zgk_A Kelch-like ECH-associat 99.6 1.1E-13 3.6E-18 126.8 24.8 235 89-353 42-294 (308)
7 3ii7_A Kelch-like protein 7; p 99.6 3.5E-13 1.2E-17 123.1 23.4 210 121-353 12-232 (306)
8 2vpj_A Kelch-like protein 12; 99.5 2.9E-12 1E-16 116.6 24.2 195 132-353 30-238 (301)
9 4asc_A Kelch repeat and BTB do 99.5 3.5E-12 1.2E-16 117.0 24.8 201 133-353 13-228 (315)
10 2xn4_A Kelch-like protein 2; s 99.5 5.6E-12 1.9E-16 114.8 24.4 195 133-353 30-236 (302)
11 1zgk_A Kelch-like ECH-associat 99.5 2.9E-12 9.8E-17 117.2 21.1 197 132-353 38-247 (308)
12 2uvk_A YJHT; unknown function, 99.5 1.5E-11 5.1E-16 114.8 23.1 222 115-353 14-301 (357)
13 2woz_A Kelch repeat and BTB do 99.4 2.7E-11 9.3E-16 111.2 22.0 201 133-353 24-238 (318)
14 2uvk_A YJHT; unknown function, 99.3 4E-10 1.4E-14 105.0 24.2 242 89-353 34-349 (357)
15 2zwa_A Leucine carboxyl methyl 99.2 6.4E-10 2.2E-14 112.9 20.9 211 119-354 396-643 (695)
16 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 6.9E-11 2.3E-15 77.7 4.4 42 21-62 7-48 (53)
17 2e31_A FBS1, F-box only protei 99.1 1.2E-10 4.1E-15 103.9 5.4 50 21-70 49-99 (297)
18 2ovr_B FBW7, F-BOX/WD repeat p 99.0 2.2E-06 7.5E-11 81.8 33.1 282 20-349 16-311 (445)
19 1k3i_A Galactose oxidase precu 99.0 2.9E-08 9.8E-13 100.3 19.2 214 120-353 197-504 (656)
20 3v7d_B Cell division control p 98.9 2.5E-06 8.4E-11 81.7 30.3 291 22-350 14-345 (464)
21 1p22_A F-BOX/WD-repeat protein 98.8 3.3E-06 1.1E-10 80.4 25.6 283 22-350 10-329 (435)
22 2zwa_A Leucine carboxyl methyl 98.7 4.5E-07 1.5E-11 92.0 17.0 156 180-354 411-591 (695)
23 1k3i_A Galactose oxidase precu 98.7 1.6E-06 5.6E-11 87.3 20.4 228 89-329 222-527 (656)
24 3l2o_B F-box only protein 4; s 97.8 2.1E-05 7.1E-10 69.5 4.8 49 22-70 4-52 (312)
25 2ast_B S-phase kinase-associat 97.6 3E-05 1E-09 71.0 3.4 42 20-61 6-47 (336)
26 2p1m_B Transport inhibitor res 97.0 0.00032 1.1E-08 69.4 3.3 36 21-56 4-40 (594)
27 3jrp_A Fusion protein of prote 96.8 0.19 6.5E-06 45.4 20.1 189 131-348 31-242 (379)
28 3ogk_B Coronatine-insensitive 96.6 0.00082 2.8E-08 66.4 3.1 36 21-56 11-47 (592)
29 3dsm_A Uncharacterized protein 96.5 0.47 1.6E-05 42.6 24.8 199 120-354 2-221 (328)
30 3g4e_A Regucalcin; six bladed 95.9 0.8 2.7E-05 40.3 22.2 207 117-355 21-239 (297)
31 3jro_A Fusion protein of prote 95.8 0.45 1.5E-05 48.3 18.6 188 131-347 29-239 (753)
32 2z2n_A Virginiamycin B lyase; 95.8 0.81 2.8E-05 39.6 23.1 192 115-350 104-299 (299)
33 3mbr_X Glutamine cyclotransfer 95.7 0.46 1.6E-05 40.9 15.1 114 215-355 27-143 (243)
34 3nol_A Glutamine cyclotransfer 95.2 0.31 1E-05 42.5 12.5 113 215-354 49-164 (262)
35 1l0q_A Surface layer protein; 95.1 1.9 6.5E-05 39.1 22.0 194 115-350 37-237 (391)
36 3ei3_B DNA damage-binding prot 94.9 2.1 7.2E-05 38.7 24.0 188 131-349 94-285 (383)
37 3q7m_A Lipoprotein YFGL, BAMB; 94.8 1.5 5.2E-05 39.8 17.0 136 180-351 197-342 (376)
38 1ri6_A Putative isomerase YBHE 94.6 2.2 7.5E-05 37.5 17.7 188 131-350 13-215 (343)
39 1k8k_C P40, ARP2/3 complex 41 94.5 2.5 8.5E-05 37.7 19.3 204 117-350 16-237 (372)
40 1l0q_A Surface layer protein; 94.5 2.7 9.1E-05 38.0 21.9 187 122-351 3-194 (391)
41 4e54_B DNA damage-binding prot 94.5 0.87 3E-05 42.5 14.8 187 131-348 140-329 (435)
42 3jrp_A Fusion protein of prote 94.5 2.6 8.7E-05 37.7 17.7 206 121-352 69-294 (379)
43 3bws_A Protein LP49; two-domai 94.4 3 0.0001 38.3 22.0 199 117-351 177-395 (433)
44 3vgz_A Uncharacterized protein 94.3 2.7 9.1E-05 37.2 24.8 199 117-351 97-308 (353)
45 3q7m_A Lipoprotein YFGL, BAMB; 94.2 3.1 0.00011 37.6 18.0 110 119-252 52-170 (376)
46 3dwl_C Actin-related protein 2 94.0 0.92 3.1E-05 41.0 13.5 197 120-349 22-239 (377)
47 3nok_A Glutaminyl cyclase; bet 93.6 1 3.5E-05 39.2 12.2 110 215-354 61-173 (268)
48 3u4y_A Uncharacterized protein 93.5 3.6 0.00012 36.1 20.9 193 119-349 8-210 (331)
49 3dsm_A Uncharacterized protein 93.5 3.9 0.00013 36.4 22.1 211 114-358 88-314 (328)
50 3v9f_A Two-component system se 93.3 7.7 0.00026 39.2 23.1 187 132-353 426-618 (781)
51 3bg1_A Protein SEC13 homolog; 93.2 3.5 0.00012 36.3 15.8 201 116-346 20-247 (316)
52 4gqb_B Methylosome protein 50; 93.1 4.7 0.00016 36.2 18.3 198 117-352 90-295 (344)
53 3hfq_A Uncharacterized protein 93.0 2.4 8.2E-05 37.7 14.6 119 216-352 48-178 (347)
54 4gga_A P55CDC, cell division c 93.0 5.4 0.00018 36.7 23.0 199 118-351 114-315 (420)
55 1q7f_A NHL, brain tumor CG1071 92.9 4.1 0.00014 35.0 26.0 202 115-354 35-246 (286)
56 4aow_A Guanine nucleotide-bind 92.7 4.8 0.00016 35.2 23.0 182 131-348 148-339 (340)
57 4aez_A CDC20, WD repeat-contai 92.7 5.8 0.0002 36.1 23.4 183 131-350 111-297 (401)
58 1rwi_B Serine/threonine-protei 92.5 4.4 0.00015 34.3 20.6 195 114-351 28-227 (270)
59 2iwa_A Glutamine cyclotransfer 92.4 3.6 0.00012 35.8 14.0 110 219-355 32-145 (266)
60 4g56_B MGC81050 protein; prote 92.4 5.1 0.00017 36.1 15.8 195 117-351 102-306 (357)
61 1gxr_A ESG1, transducin-like e 92.0 5.7 0.00019 34.6 23.1 199 115-352 57-261 (337)
62 3hfq_A Uncharacterized protein 91.9 6.3 0.00022 34.9 24.6 168 158-354 144-327 (347)
63 2qc5_A Streptogramin B lactona 91.6 5.9 0.0002 33.9 23.7 196 114-352 24-223 (300)
64 3no2_A Uncharacterized protein 91.3 6.7 0.00023 34.0 19.0 191 119-350 3-199 (276)
65 1yfq_A Cell cycle arrest prote 90.7 8.1 0.00028 33.8 22.5 200 117-350 64-286 (342)
66 3fm0_A Protein CIAO1; WDR39,SG 90.6 8.8 0.0003 34.1 18.9 195 115-344 22-223 (345)
67 1rwi_B Serine/threonine-protei 90.2 7.7 0.00026 32.7 20.6 190 115-348 72-266 (270)
68 3nol_A Glutamine cyclotransfer 89.5 9.7 0.00033 33.0 15.4 140 181-355 65-211 (262)
69 3bg1_A Protein SEC13 homolog; 89.5 10 0.00035 33.2 16.8 207 121-354 71-302 (316)
70 3fvz_A Peptidyl-glycine alpha- 89.4 11 0.00037 33.3 19.2 140 133-294 69-226 (329)
71 2pm7_B Protein transport prote 89.3 10 0.00034 32.9 21.9 200 117-347 17-239 (297)
72 2qc5_A Streptogramin B lactona 89.1 9.8 0.00034 32.5 23.8 197 115-354 67-267 (300)
73 1r5m_A SIR4-interacting protei 88.4 14 0.00047 33.3 18.5 180 131-348 169-363 (425)
74 1nir_A Nitrite reductase; hemo 87.9 20 0.00068 34.5 20.9 198 118-351 146-360 (543)
75 3mbr_X Glutamine cyclotransfer 87.8 12 0.00041 31.9 17.2 141 180-355 42-189 (243)
76 2aq5_A Coronin-1A; WD40 repeat 87.6 16 0.00054 33.1 23.8 199 120-353 93-308 (402)
77 2z2n_A Virginiamycin B lyase; 87.6 12 0.00042 31.8 25.7 197 115-354 62-262 (299)
78 4a11_B DNA excision repair pro 87.6 15 0.00052 32.8 18.6 198 120-349 55-279 (408)
79 3sjl_D Methylamine dehydrogena 87.5 6.5 0.00022 36.2 12.1 122 218-358 237-376 (386)
80 3mmy_A MRNA export factor; mRN 87.4 14 0.00049 32.3 21.1 199 117-350 94-308 (368)
81 3hrp_A Uncharacterized protein 87.3 18 0.00061 33.4 23.6 202 114-353 135-361 (409)
82 1gxr_A ESG1, transducin-like e 87.2 14 0.00048 32.0 24.3 193 116-351 104-301 (337)
83 3ow8_A WD repeat-containing pr 86.9 15 0.00053 32.2 23.4 193 118-351 89-284 (321)
84 3i2n_A WD repeat-containing pr 86.8 15 0.00053 32.0 19.4 187 132-348 43-245 (357)
85 2pm7_B Protein transport prote 86.7 15 0.0005 31.8 17.4 206 121-352 67-292 (297)
86 3dwl_C Actin-related protein 2 86.6 13 0.00046 33.0 13.8 205 115-349 61-284 (377)
87 1k8k_C P40, ARP2/3 complex 41 86.6 16 0.00056 32.2 21.1 199 118-352 61-282 (372)
88 4aez_A CDC20, WD repeat-contai 86.5 18 0.00063 32.7 22.0 98 237-350 284-384 (401)
89 3scy_A Hypothetical bacterial 86.3 17 0.00059 32.2 25.0 119 216-352 219-345 (361)
90 2dg1_A DRP35, lactonase; beta 85.6 18 0.00061 31.6 22.3 211 115-354 50-271 (333)
91 3mkq_A Coatomer beta'-subunit; 85.5 31 0.0011 34.4 23.1 194 116-350 62-263 (814)
92 2dg1_A DRP35, lactonase; beta 85.5 18 0.00061 31.6 14.2 117 217-352 54-177 (333)
93 3nok_A Glutaminyl cyclase; bet 85.4 17 0.0006 31.4 14.1 112 215-355 102-220 (268)
94 3iz6_a 40S ribosomal protein R 85.3 21 0.00071 32.1 19.2 204 118-351 75-285 (380)
95 2pm9_A Protein WEB1, protein t 85.2 21 0.00071 32.1 18.0 196 121-348 126-339 (416)
96 1nir_A Nitrite reductase; hemo 85.1 28 0.00095 33.5 18.6 189 132-349 247-461 (543)
97 3u4y_A Uncharacterized protein 85.1 18 0.00063 31.4 22.0 198 114-353 44-259 (331)
98 3bws_A Protein LP49; two-domai 84.7 23 0.00079 32.1 20.1 197 119-351 132-339 (433)
99 2ojh_A Uncharacterized protein 84.6 17 0.00058 30.5 20.0 188 131-352 20-212 (297)
100 2ynn_A Coatomer subunit beta'; 83.8 21 0.00071 30.9 20.3 194 117-351 63-264 (304)
101 4a11_B DNA excision repair pro 83.8 23 0.0008 31.5 20.8 192 131-349 164-368 (408)
102 1got_B GT-beta; complex (GTP-b 83.3 23 0.0008 31.2 22.3 194 117-349 63-260 (340)
103 3v65_B Low-density lipoprotein 82.9 28 0.00095 31.7 22.3 190 120-352 87-283 (386)
104 2vdu_B TRNA (guanine-N(7)-)-me 82.4 30 0.001 31.8 22.6 99 237-350 171-275 (450)
105 3e5z_A Putative gluconolactona 82.0 24 0.00081 30.3 23.0 202 123-355 42-255 (296)
106 3m0c_C LDL receptor, low-densi 81.9 47 0.0016 33.7 28.1 157 158-351 474-637 (791)
107 2aq5_A Coronin-1A; WD40 repeat 81.7 29 0.001 31.2 18.5 207 117-355 139-351 (402)
108 3i2n_A WD repeat-containing pr 81.6 26 0.00089 30.5 22.4 198 120-347 128-354 (357)
109 2ghs_A AGR_C_1268P; regucalcin 81.3 28 0.00095 30.6 23.8 205 117-354 57-268 (326)
110 3fm0_A Protein CIAO1; WDR39,SG 81.0 29 0.00099 30.6 17.1 145 180-351 37-186 (345)
111 1r5m_A SIR4-interacting protei 80.9 31 0.001 30.9 22.2 195 116-351 115-324 (425)
112 1vyh_C Platelet-activating fac 80.9 33 0.0011 31.2 22.4 196 117-349 158-372 (410)
113 2iwa_A Glutamine cyclotransfer 80.8 27 0.00092 30.2 21.0 193 118-348 29-239 (266)
114 2hes_X YDR267CP; beta-propelle 80.3 30 0.001 30.3 18.8 206 116-352 65-286 (330)
115 4aow_A Guanine nucleotide-bind 79.9 29 0.00099 30.0 20.6 195 120-350 50-250 (340)
116 3jro_A Fusion protein of prote 79.5 49 0.0017 33.1 15.8 98 237-348 31-134 (753)
117 4a2l_A BT_4663, two-component 79.4 55 0.0019 32.9 24.9 205 115-352 220-442 (795)
118 4g56_B MGC81050 protein; prote 79.3 34 0.0012 30.4 20.6 192 116-347 146-344 (357)
119 2ojh_A Uncharacterized protein 79.0 27 0.00093 29.2 22.6 202 115-352 47-264 (297)
120 1ri6_A Putative isomerase YBHE 78.7 32 0.0011 29.7 26.5 209 115-353 89-317 (343)
121 1pgu_A Actin interacting prote 78.7 46 0.0016 31.6 19.6 196 117-350 26-242 (615)
122 3hrp_A Uncharacterized protein 78.1 29 0.00098 31.9 12.6 112 217-352 140-255 (409)
123 4a2l_A BT_4663, two-component 77.9 61 0.0021 32.6 24.0 187 133-352 193-392 (795)
124 1qks_A Cytochrome CD1 nitrite 77.1 55 0.0019 31.7 22.5 201 120-354 166-382 (567)
125 2p4o_A Hypothetical protein; p 76.8 37 0.0013 29.5 23.5 201 115-352 37-247 (306)
126 1pjx_A Dfpase, DIISOPROPYLFLUO 76.8 35 0.0012 29.2 22.5 197 131-353 44-264 (314)
127 3v65_B Low-density lipoprotein 76.6 44 0.0015 30.3 23.4 195 117-353 124-326 (386)
128 2ovr_B FBW7, F-BOX/WD repeat p 76.6 45 0.0015 30.4 25.1 189 113-349 162-351 (445)
129 3v9f_A Two-component system se 75.7 69 0.0024 32.1 21.8 194 119-352 322-530 (781)
130 2pbi_B Guanine nucleotide-bind 75.6 43 0.0015 29.7 22.1 177 131-343 174-354 (354)
131 3ow8_A WD repeat-containing pr 75.6 41 0.0014 29.4 21.1 190 121-350 48-241 (321)
132 2mad_H Methylamine dehydrogena 75.0 44 0.0015 30.2 12.8 75 271-352 278-356 (373)
133 3odt_A Protein DOA1; ubiquitin 75.0 38 0.0013 28.7 21.8 189 117-351 111-301 (313)
134 3vl1_A 26S proteasome regulato 74.3 49 0.0017 29.7 24.6 194 117-348 105-324 (420)
135 3v64_C Agrin; beta propeller, 74.2 48 0.0016 29.6 22.1 188 120-352 44-240 (349)
136 2fp8_A Strictosidine synthase; 74.2 44 0.0015 29.1 17.2 143 132-295 164-313 (322)
137 3dm0_A Maltose-binding peripla 73.6 72 0.0025 31.3 23.8 180 131-345 492-692 (694)
138 1n7d_A LDL receptor, low-densi 73.0 18 0.0006 36.2 10.2 194 117-351 414-619 (699)
139 2xyi_A Probable histone-bindin 72.9 56 0.0019 29.8 15.3 187 131-349 202-413 (430)
140 1got_B GT-beta; complex (GTP-b 72.3 50 0.0017 28.9 21.3 177 131-343 162-340 (340)
141 1sq9_A Antiviral protein SKI8; 72.1 53 0.0018 29.1 23.2 194 121-350 27-271 (397)
142 2xyi_A Probable histone-bindin 72.1 59 0.002 29.6 15.1 156 158-346 185-353 (430)
143 2ad6_A Methanol dehydrogenase 72.1 26 0.0009 34.0 11.0 115 214-351 58-190 (571)
144 4ggc_A P55CDC, cell division c 72.0 45 0.0015 28.3 23.8 66 118-192 34-100 (318)
145 3dm0_A Maltose-binding peripla 71.9 78 0.0027 31.0 20.2 195 115-350 436-636 (694)
146 4ery_A WD repeat-containing pr 71.8 47 0.0016 28.4 23.9 194 118-350 32-227 (312)
147 2fp8_A Strictosidine synthase; 71.6 50 0.0017 28.7 22.2 195 131-355 38-278 (322)
148 4h5i_A Guanine nucleotide-exch 71.6 55 0.0019 29.1 22.3 201 115-347 139-344 (365)
149 3dr2_A Exported gluconolactona 71.5 49 0.0017 28.5 18.2 209 118-355 54-276 (305)
150 3e5z_A Putative gluconolactona 71.1 48 0.0016 28.2 18.9 189 115-351 74-291 (296)
151 4gga_A P55CDC, cell division c 70.9 52 0.0018 29.8 12.4 88 250-351 95-183 (420)
152 1ijq_A LDL receptor, low-densi 70.9 54 0.0018 28.7 21.3 180 132-352 9-201 (316)
153 3v7d_B Cell division control p 69.6 67 0.0023 29.3 28.7 198 118-350 171-385 (464)
154 3f3f_A Nucleoporin SEH1; struc 69.0 54 0.0018 28.0 20.8 200 118-348 20-251 (351)
155 2hqs_A Protein TOLB; TOLB, PAL 69.0 69 0.0024 29.2 21.9 186 133-352 159-350 (415)
156 3lrv_A PRE-mRNA-splicing facto 68.8 59 0.002 28.4 21.3 205 114-351 88-299 (343)
157 2pm9_A Protein WEB1, protein t 68.8 64 0.0022 28.7 16.7 185 131-347 43-250 (416)
158 4e54_B DNA damage-binding prot 68.7 70 0.0024 29.1 17.8 30 318-351 406-435 (435)
159 3m0c_C LDL receptor, low-densi 68.6 1E+02 0.0036 31.1 21.4 113 214-352 475-595 (791)
160 3odt_A Protein DOA1; ubiquitin 68.3 54 0.0018 27.7 21.7 189 119-350 28-218 (313)
161 3c75_H MADH, methylamine dehyd 68.2 69 0.0024 29.7 12.5 74 271-351 330-407 (426)
162 1sq9_A Antiviral protein SKI8; 67.7 66 0.0022 28.4 22.2 202 122-350 82-326 (397)
163 3k26_A Polycomb protein EED; W 67.5 61 0.0021 28.0 22.5 201 120-346 127-366 (366)
164 1kv9_A Type II quinohemoprotei 67.3 34 0.0012 33.8 10.9 116 214-351 62-192 (668)
165 1erj_A Transcriptional repress 66.3 74 0.0025 28.5 24.5 204 116-350 130-345 (393)
166 3p5b_L Low density lipoprotein 66.0 79 0.0027 28.8 25.1 191 118-349 121-323 (400)
167 3sov_A LRP-6, low-density lipo 65.9 70 0.0024 28.1 22.5 191 118-352 44-245 (318)
168 2hes_X YDR267CP; beta-propelle 65.4 69 0.0024 27.9 19.7 196 117-346 115-328 (330)
169 3v64_C Agrin; beta propeller, 64.9 76 0.0026 28.2 24.3 193 117-352 81-282 (349)
170 3o4h_A Acylamino-acid-releasin 64.6 99 0.0034 29.4 18.8 187 120-351 122-319 (582)
171 2ghs_A AGR_C_1268P; regucalcin 64.5 73 0.0025 27.8 14.8 106 218-352 60-174 (326)
172 1kb0_A Quinohemoprotein alcoho 63.7 30 0.001 34.3 9.6 116 214-351 73-204 (677)
173 3frx_A Guanine nucleotide-bind 63.5 73 0.0025 27.5 22.8 194 116-349 72-270 (319)
174 3sfz_A APAF-1, apoptotic pepti 63.5 1.5E+02 0.0052 31.2 24.0 194 115-351 621-833 (1249)
175 2p4o_A Hypothetical protein; p 63.0 74 0.0025 27.4 13.9 107 218-348 42-149 (306)
176 3ei3_B DNA damage-binding prot 62.9 81 0.0028 27.8 20.5 136 180-346 95-236 (383)
177 2hz6_A Endoplasmic reticulum t 62.8 49 0.0017 29.7 10.3 179 119-351 8-197 (369)
178 1q7f_A NHL, brain tumor CG1071 61.8 71 0.0024 26.8 26.1 191 118-346 86-280 (286)
179 3mkq_A Coatomer beta'-subunit; 60.3 1.4E+02 0.0047 29.6 23.0 183 131-349 33-220 (814)
180 4hw6_A Hypothetical protein, I 60.0 1.1E+02 0.0037 28.3 12.6 112 214-349 143-262 (433)
181 2vdu_B TRNA (guanine-N(7)-)-me 59.0 1.1E+02 0.0037 28.0 24.1 207 117-351 157-398 (450)
182 3scy_A Hypothetical bacterial 57.8 97 0.0033 27.1 20.9 192 134-352 30-248 (361)
183 3ott_A Two-component system se 57.1 1.6E+02 0.0054 29.3 23.1 190 115-352 68-266 (758)
184 3zwl_B Eukaryotic translation 56.7 96 0.0033 26.7 24.3 205 117-351 40-254 (369)
185 3vgz_A Uncharacterized protein 56.6 96 0.0033 26.7 25.1 186 132-351 68-267 (353)
186 3tc9_A Hypothetical hydrolase; 55.5 1.3E+02 0.0043 27.7 16.3 112 218-352 149-263 (430)
187 3p5b_L Low density lipoprotein 55.4 1.2E+02 0.0042 27.5 21.8 180 132-352 91-283 (400)
188 2bkl_A Prolyl endopeptidase; m 55.4 1.6E+02 0.0055 28.8 25.1 191 133-353 202-404 (695)
189 1ijq_A LDL receptor, low-densi 55.3 1.1E+02 0.0036 26.7 25.2 195 116-352 37-245 (316)
190 1npe_A Nidogen, entactin; glyc 55.1 92 0.0031 26.0 26.4 195 117-354 44-247 (267)
191 1yiq_A Quinohemoprotein alcoho 55.0 71 0.0024 31.7 10.6 115 214-350 66-196 (689)
192 4gqb_B Methylosome protein 50; 54.5 1.1E+02 0.0039 26.8 22.5 193 117-349 135-334 (344)
193 3fvz_A Peptidyl-glycine alpha- 54.2 1.1E+02 0.0037 26.6 23.7 204 115-346 96-322 (329)
194 3hxj_A Pyrrolo-quinoline quino 54.0 59 0.002 27.9 9.0 50 180-247 116-167 (330)
195 4ery_A WD repeat-containing pr 53.9 1E+02 0.0035 26.2 23.7 194 117-350 73-272 (312)
196 3vl1_A 26S proteasome regulato 53.3 1.2E+02 0.0042 26.9 21.8 97 237-346 313-419 (420)
197 2hqs_A Protein TOLB; TOLB, PAL 52.7 1.3E+02 0.0046 27.2 22.9 187 133-353 203-394 (415)
198 3dr2_A Exported gluconolactona 52.6 1.1E+02 0.0038 26.1 12.3 102 133-258 169-278 (305)
199 3no2_A Uncharacterized protein 52.4 1.1E+02 0.0037 26.0 17.1 146 180-355 14-164 (276)
200 1pby_B Quinohemoprotein amine 51.5 1.1E+02 0.0038 25.9 17.3 59 131-193 9-68 (337)
201 1qks_A Cytochrome CD1 nitrite 51.5 1.7E+02 0.0059 28.1 19.4 31 158-192 345-375 (567)
202 3k26_A Polycomb protein EED; W 51.5 1.2E+02 0.004 26.1 21.1 196 121-348 85-320 (366)
203 4hw6_A Hypothetical protein, I 51.0 1.5E+02 0.0052 27.3 18.5 131 120-281 152-294 (433)
204 3mmy_A MRNA export factor; mRN 50.4 1.2E+02 0.0041 26.0 20.6 138 121-295 54-199 (368)
205 1n7d_A LDL receptor, low-densi 49.8 1.4E+02 0.0049 29.5 11.9 135 119-280 463-603 (699)
206 3gre_A Serine/threonine-protei 49.7 1.4E+02 0.005 26.7 17.4 99 237-351 192-297 (437)
207 3f3f_A Nucleoporin SEH1; struc 49.7 1.2E+02 0.004 25.7 24.1 36 315-353 309-345 (351)
208 1vyh_C Platelet-activating fac 49.3 1.5E+02 0.0051 26.7 22.5 146 117-295 116-265 (410)
209 3frx_A Guanine nucleotide-bind 48.9 1.3E+02 0.0044 25.9 20.5 143 174-349 80-230 (319)
210 4a0p_A LRP6, LRP-6, low-densit 48.0 2.1E+02 0.0071 28.0 25.6 189 116-349 44-240 (628)
211 1flg_A Protein (quinoprotein e 47.3 1.2E+02 0.0042 29.2 10.8 30 214-252 64-95 (582)
212 2pbi_B Guanine nucleotide-bind 46.9 1.5E+02 0.0051 26.0 23.8 197 118-349 73-274 (354)
213 1p22_A F-BOX/WD-repeat protein 44.8 1.8E+02 0.006 26.3 22.7 138 180-350 152-289 (435)
214 1w6s_A Methanol dehydrogenase 44.5 86 0.0029 30.6 9.1 29 214-251 58-90 (599)
215 2ymu_A WD-40 repeat protein; u 44.1 2E+02 0.007 26.8 24.5 181 131-352 323-504 (577)
216 3sfz_A APAF-1, apoptotic pepti 43.6 3.1E+02 0.011 28.8 23.1 72 117-194 665-736 (1249)
217 2ynn_A Coatomer subunit beta'; 43.3 1.5E+02 0.0052 25.1 22.3 187 117-347 105-303 (304)
218 2oiz_A Aromatic amine dehydrog 43.1 1.8E+02 0.006 25.8 13.4 72 271-352 265-340 (361)
219 3pe7_A Oligogalacturonate lyas 43.1 1.7E+02 0.0058 25.6 18.6 199 132-352 59-279 (388)
220 2hz6_A Endoplasmic reticulum t 42.0 5 0.00017 36.5 -0.2 29 214-251 5-35 (369)
221 1yfq_A Cell cycle arrest prote 41.7 1.6E+02 0.0056 25.0 19.6 187 118-347 20-226 (342)
222 1jmx_B Amine dehydrogenase; ox 41.6 1.6E+02 0.0056 25.0 15.8 154 174-351 14-180 (349)
223 1evh_A WH1 domain, protein (ME 39.3 48 0.0016 24.3 4.9 42 133-178 11-52 (112)
224 3ott_A Two-component system se 39.0 3E+02 0.01 27.2 13.2 96 238-352 83-180 (758)
225 1pby_B Quinohemoprotein amine 38.1 1.8E+02 0.0062 24.5 16.7 147 180-351 10-168 (337)
226 4a0p_A LRP6, LRP-6, low-densit 37.9 2.9E+02 0.01 26.8 25.6 179 132-350 14-201 (628)
227 1ddw_A GLGF-domain protein hom 37.8 59 0.002 24.2 5.2 40 133-178 11-51 (120)
228 3sre_A PON1, serum paraoxonase 36.6 2.3E+02 0.008 25.3 19.6 199 120-345 60-297 (355)
229 1egx_A VAsp, vasodilator-stimu 36.6 39 0.0013 24.9 4.0 42 134-178 12-53 (115)
230 3zwl_B Eukaryotic translation 35.9 2.1E+02 0.007 24.5 23.4 200 117-351 82-309 (369)
231 1npe_A Nidogen, entactin; glyc 35.7 1.9E+02 0.0064 23.9 19.5 159 158-352 39-204 (267)
232 2qkl_A DCP1 protein, SPBC3B9.2 34.8 11 0.00038 28.6 0.7 21 338-358 34-54 (127)
233 3dw8_B Serine/threonine-protei 34.6 2.5E+02 0.0084 25.0 18.5 100 237-346 198-315 (447)
234 2kwv_A RAD30 homolog B, DNA po 34.4 20 0.0007 21.5 1.7 17 23-39 21-37 (48)
235 1yr2_A Prolyl oligopeptidase; 34.3 3.5E+02 0.012 26.6 27.4 156 170-352 279-447 (741)
236 2lyd_A Decapping protein 1; DC 33.9 44 0.0015 25.5 4.0 21 338-358 39-59 (134)
237 3iz6_a 40S ribosomal protein R 33.3 2.5E+02 0.0086 24.7 21.3 182 131-347 178-376 (380)
238 2xzm_R RACK1; ribosome, transl 32.8 2.4E+02 0.0082 24.3 20.2 30 315-347 312-341 (343)
239 1erj_A Transcriptional repress 32.5 2.6E+02 0.009 24.7 21.2 135 180-347 144-288 (393)
240 2z3z_A Dipeptidyl aminopeptida 32.4 3.5E+02 0.012 26.1 21.7 71 115-197 87-162 (706)
241 2qe8_A Uncharacterized protein 31.8 2.3E+02 0.008 24.6 9.4 62 214-279 71-139 (343)
242 1jmx_B Amine dehydrogenase; ox 31.3 2.4E+02 0.0082 23.9 21.8 70 118-194 8-78 (349)
243 1kv9_A Type II quinohemoprotei 31.2 3.6E+02 0.012 26.3 11.4 117 119-252 65-195 (668)
244 1kb0_A Quinohemoprotein alcoho 30.9 3.9E+02 0.013 26.2 19.8 117 119-252 76-207 (677)
245 2be1_A Serine/threonine-protei 30.4 1E+02 0.0034 27.6 6.5 57 180-249 66-133 (339)
246 1nr0_A Actin interacting prote 30.2 3.7E+02 0.013 25.6 24.5 71 117-194 198-274 (611)
247 4ggc_A P55CDC, cell division c 30.0 2.4E+02 0.0082 23.5 17.7 145 174-348 38-183 (318)
248 1mda_H Methylamine dehydrogena 29.5 2.5E+02 0.0086 25.2 9.1 51 302-356 304-357 (368)
249 3g4e_A Regucalcin; six bladed 29.4 2.6E+02 0.0088 23.6 20.4 142 180-349 34-185 (297)
250 3azo_A Aminopeptidase; POP fam 29.1 3.9E+02 0.013 25.5 21.5 190 133-352 161-375 (662)
251 3pe7_A Oligogalacturonate lyas 28.7 2.9E+02 0.0099 24.0 15.6 109 132-255 167-283 (388)
252 3s94_A LRP-6, low-density lipo 28.6 4.1E+02 0.014 25.7 19.7 195 122-352 11-208 (619)
253 3hxj_A Pyrrolo-quinoline quino 28.1 2.7E+02 0.0093 23.4 9.8 15 238-252 236-250 (330)
254 2xbg_A YCF48-like protein; pho 26.5 3.1E+02 0.011 23.7 15.7 140 182-353 14-158 (327)
255 2ymu_A WD-40 repeat protein; u 25.1 4.1E+02 0.014 24.6 25.0 181 131-352 241-422 (577)
256 1i2h_A PSD-ZIP45(homer-1C/VESL 24.5 93 0.0032 24.7 4.5 39 134-178 17-56 (168)
257 2p9w_A MAL S 1 allergenic prot 24.0 2.7E+02 0.0092 24.8 8.0 102 236-347 99-216 (334)
258 3sov_A LRP-6, low-density lipo 23.6 3.6E+02 0.012 23.3 19.9 112 217-352 89-203 (318)
259 2dk7_A Transcription elongatio 23.1 75 0.0026 21.3 3.1 21 131-151 28-48 (73)
260 3q6k_A 43.2 kDa salivary prote 22.8 4.3E+02 0.015 23.9 9.5 102 118-252 82-196 (381)
261 1nr0_A Actin interacting prote 22.3 5.1E+02 0.017 24.6 22.4 186 118-346 333-522 (611)
262 3vu4_A KMHSV2; beta-propeller 22.2 3.9E+02 0.013 23.2 20.0 183 116-347 66-272 (355)
263 3gre_A Serine/threonine-protei 21.3 4.3E+02 0.015 23.4 19.3 101 173-295 184-292 (437)
264 3lrv_A PRE-mRNA-splicing facto 20.7 4E+02 0.014 22.8 22.8 153 120-304 138-299 (343)
265 2z3z_A Dipeptidyl aminopeptida 20.5 5.7E+02 0.02 24.5 23.0 190 132-348 234-437 (706)
266 2ecf_A Dipeptidyl peptidase IV 20.1 6E+02 0.02 24.6 20.5 72 115-197 114-188 (741)
267 2w18_A PALB2, fancn, partner a 20.1 4.1E+02 0.014 23.8 8.4 34 272-312 53-86 (356)
268 3kvp_A Uncharacterized protein 20.0 1.1E+02 0.0036 20.2 3.2 15 338-352 41-55 (72)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.67 E-value=4.5e-14 Score=129.69 Aligned_cols=238 Identities=12% Similarity=0.094 Sum_probs=158.8
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecC-----C----CCceEEEEccCccceeecCCCCCCCCcee
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG-----S----DRSLIYLWNPLIKKYMTLPRPSLNPRYLG 159 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~-----~----~~~~~~v~NP~t~~~~~LP~~~~~~~~~~ 159 (383)
..|++....|...+.|.. ........+..+|.|++..+. . ....++++||.+++|..+|+++..+...+
T Consensus 16 ~~yd~~~~~W~~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 16 VAYDPAANECYCASLSSQ--VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEETTTTEEEEEECCCC--SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred EEECCCCCeEecCCCCCC--CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 578888888865444331 122334455567777655431 0 11248999999999999999887653322
Q ss_pred EEEeccCCCCCCeEEEEEEe---------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccC
Q 016751 160 FGVNSVSGHLDDFKVVTISV---------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCY 230 (383)
Q Consensus 160 ~g~d~~~~~~~~ykVv~~~~---------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~ 230 (383)
.... .+ +++.+.. ...+++|+..+++|+.++ .+|.++..+. ++.++|.+|.+++..
T Consensus 94 ~~~~-----~~--~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~-- 158 (315)
T 4asc_A 94 LGEA-----LN--SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYVVYGHT-----VLSHMDLVYVIGGKG-- 158 (315)
T ss_dssp EEEE-----TT--EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSCCBSCE-----EEEETTEEEEECCBC--
T ss_pred EEEE-----CC--EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCccccee-----EEEECCEEEEEeCCC--
Confidence 2211 11 2222211 457999999999999999 7887765443 688999999998863
Q ss_pred CCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec
Q 016751 231 HDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE 309 (383)
Q Consensus 231 ~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 309 (383)
.+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ...-.+|.++-. +++|+.+..++
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~p 231 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQ-TAR---SLFGATVHDGRIIVAAGVTDT-GLTSSAEVYSIT--DNKWAPFEAFP 231 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEEEEECSS-SEEEEEEEEETT--TTEEEEECCCS
T ss_pred CCCcccceEEEEeCCCCeEEECCCCC-Cch---hceEEEEECCEEEEEeccCCC-CccceEEEEECC--CCeEEECCCCC
Confidence 2233456899999999999998 666 554 456678889999999987652 124467888753 46899988777
Q ss_pred CCCceeEEEEEeeCCcEEEEEEeeC-----C------ceEEEEEeCCCCeEEEE
Q 016751 310 KPQRIWWPLGFTERGKIFIRGECRH-----G------GYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 310 ~~~~~~~~~~~~~~g~i~~~~~~~~-----~------~~~~~~yd~~t~~~~~v 352 (383)
... ....++..++.||+.|-... + ...+..||+++++|+.+
T Consensus 232 ~~r--~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 232 QER--SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp SCC--BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred Ccc--cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 654 22223334678888831100 0 12589999999999998
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.67 E-value=5.6e-14 Score=129.22 Aligned_cols=236 Identities=10% Similarity=0.105 Sum_probs=158.7
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecCC---------CCceEEEEccCccceeecCCCCCCCCcee
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGS---------DRSLIYLWNPLIKKYMTLPRPSLNPRYLG 159 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~~---------~~~~~~v~NP~t~~~~~LP~~~~~~~~~~ 159 (383)
..|++....|...+.+... .......+..+|.|++..+.. ....++++||.+++|..+|+++..+...+
T Consensus 27 ~~yd~~~~~W~~~~~~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 27 VAYDPMENECYLTALAEQI--PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEETTTTEEEEEEECTTS--CSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred EEECCCCCceecccCCccC--CccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 5788888888764443211 223344566677776665410 01238899999999999998887654422
Q ss_pred EEEeccCCCCCCeEEEEEEe--------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCC
Q 016751 160 FGVNSVSGHLDDFKVVTISV--------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYH 231 (383)
Q Consensus 160 ~g~d~~~~~~~~ykVv~~~~--------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~ 231 (383)
.... .+ +++.+.. ...+++|++.+++|+.++ .+|.++..+. ++.++|.+|.+++.. .
T Consensus 105 ~~~~-----~~--~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~ 169 (318)
T 2woz_A 105 LGEV-----DD--KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHN-----VISHNGMIYCLGGKT--D 169 (318)
T ss_dssp EEEE-----TT--EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCE-----EEEETTEEEEECCEE--S
T ss_pred eEEE-----CC--EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccE-----EEEECCEEEEEcCCC--C
Confidence 2221 11 2222221 347899999999999998 8887765443 678999999998864 2
Q ss_pred CCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC
Q 016751 232 DNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK 310 (383)
Q Consensus 232 ~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 310 (383)
+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.... ...-.+|.++- .+++|+++..++.
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~--~~~~W~~~~~~p~ 242 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMK-TPR---SMFGVAIHKGKIVIAGGVTED-GLSASVEAFDL--KTNKWEVMTEFPQ 242 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEEEEEETT-EEEEEEEEEET--TTCCEEECCCCSS
T ss_pred CCCccceEEEEcCCCCEEEECCCCC-CCc---ccceEEEECCEEEEEcCcCCC-CccceEEEEEC--CCCeEEECCCCCC
Confidence 223346799999999999998 666 544 445678889999999986542 12346777764 2467999877776
Q ss_pred CCceeEEEEEeeCCcEEEEEEeeCC-------------ceEEEEEeCCCCeEEEE
Q 016751 311 PQRIWWPLGFTERGKIFIRGECRHG-------------GYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 311 ~~~~~~~~~~~~~g~i~~~~~~~~~-------------~~~~~~yd~~t~~~~~v 352 (383)
.. ....++..++.||+. .+.. ...+..||+++++|+++
T Consensus 243 ~r--~~~~~~~~~~~i~v~--GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 243 ER--SSISLVSLAGSLYAI--GGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CC--BSCEEEEETTEEEEE--CCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cc--cceEEEEECCEEEEE--CCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 54 222233346788888 3211 12599999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.65 E-value=1.1e-13 Score=126.49 Aligned_cols=237 Identities=12% Similarity=0.049 Sum_probs=158.8
Q ss_pred eeecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecC--CCCceEEEEccCccceeecCCCCCCCCceeEEEecc
Q 016751 88 LGFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG--SDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSV 165 (383)
Q Consensus 88 ~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~--~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~ 165 (383)
...|++....|..+.....+ ......+..+|.|++..+. .....++++||.+++|..+|+++..+...+....
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 100 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-- 100 (306)
T ss_dssp EEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--
T ss_pred EEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--
Confidence 45788888888877543222 1222334457777665432 1245789999999999999988876544222211
Q ss_pred CCCCCCeEEEEEEe-------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCC---
Q 016751 166 SGHLDDFKVVTISV-------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSC--- 235 (383)
Q Consensus 166 ~~~~~~ykVv~~~~-------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~--- 235 (383)
.+ +++.+.. ...+++|++.+++|+.++ .+|.++..+. ++.++|.+|.+++.. .....
T Consensus 101 ---~~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~~~~ 167 (306)
T 3ii7_A 101 ---EG--KIYTSGGSEVGNSALYLFECYDTRTESWHTKP-SMLTQRCSHG-----MVEANGLIYVCGGSL--GNNVSGRV 167 (306)
T ss_dssp ---TT--EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-CCSSCCBSCE-----EEEETTEEEEECCEE--SCTTTCEE
T ss_pred ---CC--EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-CCcCCcceeE-----EEEECCEEEEECCCC--CCCCcccc
Confidence 11 2333321 457999999999999998 8887765443 688999999998865 11111
Q ss_pred CcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 016751 236 PWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 314 (383)
Q Consensus 236 ~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 314 (383)
...+..||+.+++|+.+ ++| ..+ ....++..+|+|+++++.... ...-.+|.++-. .++|+.+..++...
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~p~~r-- 238 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMI-EAR---KNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIK--LNEWKMVSPMPWKG-- 238 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCEETT-EEBCCEEEEETT--TTEEEECCCCSCCB--
T ss_pred cceEEEeCCCCCeEEECCCcc-chh---hcceEEEECCEEEEEeCCCCC-CCCceEEEeeCC--CCcEEECCCCCCCc--
Confidence 56799999999999998 666 544 456778889999999876541 112356777642 46799987776653
Q ss_pred eEEEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 016751 315 WWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 315 ~~~~~~~~~g~i~~~~~~~~~----~~~~~~yd~~t~~~~~v~ 353 (383)
....++..++.||+. .+.+ ...+..||+++++|+.+.
T Consensus 239 ~~~~~~~~~~~i~v~--GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 239 VTVKCAAVGSIVYVL--AGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp SCCEEEEETTEEEEE--ECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred cceeEEEECCEEEEE--eCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 222233346788888 4211 126999999999999984
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.64 E-value=1.1e-13 Score=126.10 Aligned_cols=236 Identities=12% Similarity=0.186 Sum_probs=156.1
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecCC---CCceEEEEccCccceeecCCCCCCCCceeEEEecc
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGS---DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSV 165 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~~---~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~ 165 (383)
..|+.....|..+.....+ ......+..+|.|++..+.. ....++++||.+++|..+|+++..+...+...-
T Consensus 33 ~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 107 (302)
T 2xn4_A 33 ECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-- 107 (302)
T ss_dssp EEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred EEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--
Confidence 4677777777776422111 11222344577776654321 235789999999999999998877644222221
Q ss_pred CCCCCCeEEEEEEe------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCC-CCCcE
Q 016751 166 SGHLDDFKVVTISV------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDN-SCPWL 238 (383)
Q Consensus 166 ~~~~~~ykVv~~~~------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~-~~~~~ 238 (383)
.+ +++.+.. ...+++|+..+++|+.++ .+|.++..+. ++.++|.+|.+++.. ... .....
T Consensus 108 ---~~--~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~~~~~ 174 (302)
T 2xn4_A 108 ---NG--LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-PMNTRRSSVG-----VGVVGGLLYAVGGYD--VASRQCLST 174 (302)
T ss_dssp ---TT--EEEEEEEECSSCEEEEEEEEETTTTEEEEEC-CCSSCCBSCE-----EEEETTEEEEECCEE--TTTTEECCC
T ss_pred ---CC--EEEEEcCCCCCccCceEEEEeCCCCeEeecC-CCCCcccCce-----EEEECCEEEEEeCCC--CCCCccccE
Confidence 12 2222221 357999999999999998 7877655433 678999999998765 110 12457
Q ss_pred EEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEE
Q 016751 239 IVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWP 317 (383)
Q Consensus 239 il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 317 (383)
+..||+.+++|+.+ ++| ..+ ....++..+|+|+++++.... ...-.+|.++-. .+.|+++..++... ...
T Consensus 175 ~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~--~~~W~~~~~~~~~r--~~~ 245 (302)
T 2xn4_A 175 VECYNATTNEWTYIAEMS-TRR---SGAGVGVLNNLLYAVGGHDGP-LVRKSVEVYDPT--TNAWRQVADMNMCR--RNA 245 (302)
T ss_dssp EEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCBSSS-SBCCCEEEEETT--TTEEEEECCCSSCC--BSC
T ss_pred EEEEeCCCCcEEECCCCc-ccc---ccccEEEECCEEEEECCCCCC-cccceEEEEeCC--CCCEeeCCCCCCcc--ccC
Confidence 99999999999998 666 544 456778889999999876542 122357777652 46799988777654 222
Q ss_pred EEEeeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 016751 318 LGFTERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 318 ~~~~~~g~i~~~~~~~~~~----~~~~~yd~~t~~~~~v~ 353 (383)
..+..++.||+. .+.+. ..+.+||+++++|+.+.
T Consensus 246 ~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 246 GVCAVNGLLYVV--GGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred eEEEECCEEEEE--CCcCCCcccccEEEEcCCCCeEEECC
Confidence 233346788888 42111 15999999999999884
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.64 E-value=1.9e-13 Score=124.51 Aligned_cols=235 Identities=12% Similarity=0.148 Sum_probs=156.8
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecCC---CCceEEEEccCccc---eeecCCCCCCCCceeEEE
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGS---DRSLIYLWNPLIKK---YMTLPRPSLNPRYLGFGV 162 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~~---~~~~~~v~NP~t~~---~~~LP~~~~~~~~~~~g~ 162 (383)
..|++....|..+.....+ ......+..+|.|++..+.. ....++++||.+++ |..+++++..+...+...
T Consensus 34 ~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 34 EKYDPKTQEWSFLPSITRK---RRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp EEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred EEEcCCCCeEEeCCCCChh---hccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 4677777778776532211 12223344567666554321 23579999999999 999999887764433322
Q ss_pred eccCCCCCCeEEEEEEe------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCC
Q 016751 163 NSVSGHLDDFKVVTISV------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCP 236 (383)
Q Consensus 163 d~~~~~~~~ykVv~~~~------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~ 236 (383)
. .+ +++.+.. ...+++|+..+++|+.++ .+|.++..+. ++.++|.+|.+++.. +....
T Consensus 111 ~-----~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~---~~~~~ 174 (301)
T 2vpj_A 111 L-----GD--MIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-DMQTAREGAG-----LVVASGVIYCLGGYD---GLNIL 174 (301)
T ss_dssp E-----TT--EEEEECCBCSSCBCCEEEEEETTTTEEEEEE-ECSSCCBSCE-----EEEETTEEEEECCBC---SSCBC
T ss_pred E-----CC--EEEEEcccCCCcccceEEEEcCCCCeEEECC-CCCCCcccce-----EEEECCEEEEECCCC---CCccc
Confidence 1 11 2333332 458999999999999998 7776654433 678899999998754 12234
Q ss_pred cEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCcee
Q 016751 237 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIW 315 (383)
Q Consensus 237 ~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 315 (383)
..+..||+.+++|+.+ ++| ..+ ....++..+|+|+++++.... ...-++|.++-. +++|.++..++... .
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~--~~~W~~~~~~p~~r--~ 245 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMA-TKR---SGAGVALLNDHIYVVGGFDGT-AHLSSVEAYNIR--TDSWTTVTSMTTPR--C 245 (301)
T ss_dssp CCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCBCSS-SBCCCEEEEETT--TTEEEEECCCSSCC--B
T ss_pred ceEEEEeCCCCcEEeCCCCC-ccc---ccceEEEECCEEEEEeCCCCC-cccceEEEEeCC--CCcEEECCCCCCcc--c
Confidence 6799999999999998 566 544 456778889999999886542 113456666642 46799987776654 2
Q ss_pred EEEEEeeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 016751 316 WPLGFTERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 316 ~~~~~~~~g~i~~~~~~~~~~----~~~~~yd~~t~~~~~v~ 353 (383)
...++..++.||+. .+.+. ..+..||+++++|+.+.
T Consensus 246 ~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 246 YVGATVLRGRLYAI--AGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SCEEEEETTEEEEE--CCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred ceeEEEECCEEEEE--cCcCCCcccccEEEEcCCCCeEEEcC
Confidence 22233346788888 42111 26999999999999883
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.63 E-value=1.1e-13 Score=126.83 Aligned_cols=235 Identities=14% Similarity=0.138 Sum_probs=156.9
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecC-------CCCceEEEEccCccceeecCCCCCCCCceeEE
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNG-------SDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFG 161 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~-------~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g 161 (383)
..|++....|..+.....+ ......+..+|.|++..+. .....++++||.+++|..+|+++..+...+..
T Consensus 42 ~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 42 EAYNPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp EEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred EEEcCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 4677777788877432221 1122334457777665431 11347899999999999999988766443322
Q ss_pred EeccCCCCCCeEEEEEEe------cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCC
Q 016751 162 VNSVSGHLDDFKVVTISV------NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSC 235 (383)
Q Consensus 162 ~d~~~~~~~~ykVv~~~~------~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~ 235 (383)
.- .+ +++.+.. ...+++|+..+++|+.++ .+|.++..+. ++.++|.+|.+++.. +...
T Consensus 119 ~~-----~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~---~~~~ 182 (308)
T 1zgk_A 119 VI-----DG--HIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PMLTRRIGVG-----VAVLNRLLYAVGGFD---GTNR 182 (308)
T ss_dssp EE-----TT--EEEEECCEETTEECCCEEEEETTTTEEEECC-CCSSCCBSCE-----EEEETTEEEEECCBC---SSCB
T ss_pred EE-----CC--EEEEEcCCCCCcccccEEEECCCCCeEeECC-CCCccccceE-----EEEECCEEEEEeCCC---CCCc
Confidence 21 11 2333321 468999999999999998 7777665443 678899999998764 1122
Q ss_pred CcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCce
Q 016751 236 PWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRI 314 (383)
Q Consensus 236 ~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 314 (383)
...+..||+.+++|+.+ .+| ..+ .....+..+|+|+++++.... ...-.+|+++-. .++|+++..++...
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~--~~~W~~~~~~p~~r-- 253 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMN-TIR---SGAGVCVLHNCIYAAGGYDGQ-DQLNSVERYDVE--TETWTFVAPMKHRR-- 253 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECCBCSS-SBCCCEEEEETT--TTEEEECCCCSSCC--
T ss_pred CceEEEEeCCCCeEeeCCCCC-Ccc---ccceEEEECCEEEEEeCCCCC-CccceEEEEeCC--CCcEEECCCCCCCc--
Confidence 46799999999999988 666 544 455677889999999876541 123457777642 46799987776654
Q ss_pred eEEEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 016751 315 WWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 315 ~~~~~~~~~g~i~~~~~~~~~----~~~~~~yd~~t~~~~~v~ 353 (383)
.....+..++.||+. .+.+ ...+.+||+++++|+.+.
T Consensus 254 ~~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 254 SALGITVHQGRIYVL--GGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp BSCEEEEETTEEEEE--CCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEECCEEEEE--cCcCCCcccceEEEEcCCCCEEeecC
Confidence 222233346788888 4211 116999999999999984
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.58 E-value=3.5e-13 Score=123.13 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=142.5
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-----cCeEEEEEcCCCceee
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-----NADAEVYSLRSNSWKN 195 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-----~~~~~vyss~t~~W~~ 195 (383)
+.|++..+......++++||.+++|..+++++..+...+.... .+ +++.+.. ...+++|+..+++|+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~--~lyv~GG~~~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-----DN--VVYILGGSQLFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-----TT--EEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-----CC--EEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence 4444444322356799999999999999998876644332221 11 2333321 4689999999999999
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeE
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYL 274 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L 274 (383)
++ .+|.++..+. ++.++|.+|.+++.. .+......+..||+.+++|+.+ ++| ..+ .....+..+|+|
T Consensus 85 ~~-~~p~~r~~~~-----~~~~~~~iyv~GG~~--~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~i 152 (306)
T 3ii7_A 85 KL-GPPTPRDSLA-----ACAAEGKIYTSGGSE--VGNSALYLFECYDTRTESWHTKPSML-TQR---CSHGMVEANGLI 152 (306)
T ss_dssp EE-CCSSCCBSCE-----EEEETTEEEEECCBB--TTBSCCCCEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEE
T ss_pred CC-CCCcccccee-----EEEECCEEEEECCCC--CCCcEeeeEEEEeCCCCceEeCCCCc-CCc---ceeEEEEECCEE
Confidence 98 7887665443 678899999998764 2233456899999999999998 666 554 456677889999
Q ss_pred EEEEecCCCCcc---EEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc--eEEEEEeCCCCeE
Q 016751 275 CVFATIPNNTFR---SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG--YGLLVYNPHSDTF 349 (383)
Q Consensus 275 ~~v~~~~~~~~~---~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~~~yd~~t~~~ 349 (383)
+++++....... .-.+|.++-. .+.|+++..++... ....++..++.||+.|-..... ..+..||+++++|
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPA--TETWTELCPMIEAR--KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred EEECCCCCCCCcccccceEEEeCCC--CCeEEECCCccchh--hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 999876542111 3456777642 46799987776554 2223333467888882110111 1599999999999
Q ss_pred EEEE
Q 016751 350 KCIG 353 (383)
Q Consensus 350 ~~v~ 353 (383)
+.+.
T Consensus 229 ~~~~ 232 (306)
T 3ii7_A 229 KMVS 232 (306)
T ss_dssp EECC
T ss_pred EECC
Confidence 9883
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.53 E-value=2.9e-12 Score=116.61 Aligned_cols=195 Identities=12% Similarity=0.133 Sum_probs=136.4
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe------cCeEEEEEcCCCc---eeeeccCCCc
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV------NADAEVYSLRSNS---WKNIAYGFPR 202 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~------~~~~~vyss~t~~---W~~~~~~~p~ 202 (383)
...++++||.+++|..+|+++..+...+.... .+ +++.+.. ...+++|+..+++ |+.++ .+|.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~--~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~-~~p~ 101 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-----HD--RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA-PMNV 101 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TT--EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC-CCSS
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEE-----CC--EEEEEcCCCCCccCceEEEEECCCCCCCeeEECC-CCCC
Confidence 45789999999999999988776543222221 11 2333321 4579999999999 99998 8887
Q ss_pred eeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecC
Q 016751 203 SIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIP 281 (383)
Q Consensus 203 ~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~ 281 (383)
++..+. ++.++|.+|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++..
T Consensus 102 ~r~~~~-----~~~~~~~lyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 102 RRGLAG-----ATTLGDMIYVSGGFD---GSRRHTSMERYDPNIDQWSMLGDMQ-TAR---EGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CCBSCE-----EEEETTEEEEECCBC---SSCBCCEEEEEETTTTEEEEEEECS-SCC---BSCEEEEETTEEEEECCBC
T ss_pred Ccccee-----EEEECCEEEEEcccC---CCcccceEEEEcCCCCeEEECCCCC-CCc---ccceEEEECCEEEEECCCC
Confidence 665443 678899999998764 122246899999999999988 666 554 4566778899999998765
Q ss_pred CCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 016751 282 NNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 282 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~~~~yd~~t~~~~~v~ 353 (383)
.. ...-.+|.++-. .+.|+++..++... ....++..++.||+. .+.+ ...+..||+++++|+.+.
T Consensus 170 ~~-~~~~~~~~~d~~--~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 170 GL-NILNSVEKYDPH--TGHWTNVTPMATKR--SGAGVALLNDHIYVV--GGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp SS-CBCCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CC-cccceEEEEeCC--CCcEEeCCCCCccc--ccceEEEECCEEEEE--eCCCCCcccceEEEEeCCCCcEEECC
Confidence 42 123456777642 46899987776554 222333346788888 4211 125999999999999984
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.53 E-value=3.5e-12 Score=116.96 Aligned_cols=201 Identities=9% Similarity=0.048 Sum_probs=133.5
Q ss_pred ceEEEEccCccceeecCCCCC--CCCceeEEEeccCCCCCCeEEEEEEe----------cCeEEEEEcCCCceeeeccCC
Q 016751 133 SLIYLWNPLIKKYMTLPRPSL--NPRYLGFGVNSVSGHLDDFKVVTISV----------NADAEVYSLRSNSWKNIAYGF 200 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~--~~~~~~~g~d~~~~~~~~ykVv~~~~----------~~~~~vyss~t~~W~~~~~~~ 200 (383)
..++++||.+++|.. ++++. .+...+... . .+..-|+.... ...+++|+..+++|+.++ .+
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~--~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~ 85 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVT--K---ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP-PL 85 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEEC--T---TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-CB
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEE--E---CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-CC
Confidence 579999999999986 43332 222222211 1 22222222210 234899999999999998 88
Q ss_pred CceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEe
Q 016751 201 PRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFAT 279 (383)
Q Consensus 201 p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~ 279 (383)
|.++..+. .+.++|.+|.+++.....+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++
T Consensus 86 p~~r~~~~-----~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 86 PSPRCLFG-----LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVV---YGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp SSCEESCE-----EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECC
T ss_pred Ccchhcee-----EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-Ccc---cceeEEEECCEEEEEeC
Confidence 87766543 688899999998854111133446899999999999998 677 555 45677889999999998
Q ss_pred cCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc--eEEEEEeCCCCeEEEEE
Q 016751 280 IPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG--YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 280 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~~~yd~~t~~~~~v~ 353 (383)
........-.+|.++-. .++|+++..++... ....++..++.||+.|-..... ..+.+||+++++|+.+.
T Consensus 157 ~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPK--KFEWKELAPMQTAR--SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp BCTTSCBCCCEEEEETT--TTEEEECCCCSSCC--BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCCcccceEEEEeCC--CCeEEECCCCCCch--hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 73322233467777653 46799987776654 2223334467888883220111 16999999999999984
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.51 E-value=5.6e-12 Score=114.81 Aligned_cols=195 Identities=11% Similarity=0.132 Sum_probs=135.5
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe------cCeEEEEEcCCCceeeeccCCCceeee
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV------NADAEVYSLRSNSWKNIAYGFPRSIEI 206 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~------~~~~~vyss~t~~W~~~~~~~p~~~~~ 206 (383)
..++++||.+++|..++++|..+...+.... .+ +++.+.. ...+++|+..+++|+.++ .+|.++..
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~ 101 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM-----AG--LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA-NMRDRRST 101 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-----TT--EEEEESCBCSSSBCCCEEEEETTTTEEEEEC-CCSSCCBS
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE-----CC--EEEEEeCcCCCccccceEEECCCCCceeeCC-CCCccccc
Confidence 4689999999999999988876543222211 11 2333321 457999999999999999 88876654
Q ss_pred ccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCC-
Q 016751 207 NRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNT- 284 (383)
Q Consensus 207 ~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~- 284 (383)
+. ++.++|.+|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.....
T Consensus 102 ~~-----~~~~~~~iyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 102 LG-----AAVLNGLLYAVGGFD---GSTGLSSVEAYNIKSNEWFHVAPMN-TRR---SSVGVGVVGGLLYAVGGYDVASR 169 (302)
T ss_dssp CE-----EEEETTEEEEEEEEC---SSCEEEEEEEEETTTTEEEEECCCS-SCC---BSCEEEEETTEEEEECCEETTTT
T ss_pred eE-----EEEECCEEEEEcCCC---CCccCceEEEEeCCCCeEeecCCCC-Ccc---cCceEEEECCEEEEEeCCCCCCC
Confidence 43 678899999998864 112235799999999999998 666 544 4566778899999998765421
Q ss_pred ccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc----eEEEEEeCCCCeEEEEE
Q 016751 285 FRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG----YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 285 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~----~~~~~yd~~t~~~~~v~ 353 (383)
...-.+|.++-. .+.|+++..++... ....++..++.||+. .+.+. ..+..||+++++|+.+.
T Consensus 170 ~~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 170 QCLSTVECYNAT--TNEWTYIAEMSTRR--SGAGVGVLNNLLYAV--GGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EECCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEE--CCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred ccccEEEEEeCC--CCcEEECCCCcccc--ccccEEEECCEEEEE--CCCCCCcccceEEEEeCCCCCEeeCC
Confidence 012356777642 46799987777654 222333346788888 42111 15999999999999984
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.49 E-value=2.9e-12 Score=117.24 Aligned_cols=197 Identities=11% Similarity=0.050 Sum_probs=135.1
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEE----e----cCeEEEEEcCCCceeeeccCCCce
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS----V----NADAEVYSLRSNSWKNIAYGFPRS 203 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~----~----~~~~~vyss~t~~W~~~~~~~p~~ 203 (383)
...++++||.+++|..+++++..+...+.... .+...|+... . ...+++|+..+++|+.++ .+|.+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~ 111 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-----GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA-PMSVP 111 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC-CCSSC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEE-----CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC-CCCcC
Confidence 45789999999999999988876644222211 1111111111 0 457999999999999998 78776
Q ss_pred eeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCC
Q 016751 204 IEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPN 282 (383)
Q Consensus 204 ~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~ 282 (383)
+..+. ++.++|.+|.+++.. +......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++...
T Consensus 112 r~~~~-----~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 112 RNRIG-----VGVIDGHIYAVGGSH---GCIHHNSVERYEPERDEWHLVAPML-TRR---IGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp CBTCE-----EEEETTEEEEECCEE---TTEECCCEEEEETTTTEEEECCCCS-SCC---BSCEEEEETTEEEEECCBCS
T ss_pred ccccE-----EEEECCEEEEEcCCC---CCcccccEEEECCCCCeEeECCCCC-ccc---cceEEEEECCEEEEEeCCCC
Confidence 65433 678899999998764 112235799999999999998 666 555 45567778999999988654
Q ss_pred CCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCC----ceEEEEEeCCCCeEEEEE
Q 016751 283 NTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG----GYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 283 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----~~~~~~yd~~t~~~~~v~ 353 (383)
.. ..-.+|.++- ..+.|+++..++... ....++..++.||+. .+.. ...+..||+++++|+.+.
T Consensus 180 ~~-~~~~~~~yd~--~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~--GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 180 TN-RLNSAECYYP--ERNEWRMITAMNTIR--SGAGVCVLHNCIYAA--GGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp SC-BCCCEEEEET--TTTEEEECCCCSSCC--BSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CC-cCceEEEEeC--CCCeEeeCCCCCCcc--ccceEEEECCEEEEE--eCCCCCCccceEEEEeCCCCcEEECC
Confidence 21 1335666664 246899987776654 222233346788888 4211 125999999999999874
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.45 E-value=1.5e-11 Score=114.78 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=136.2
Q ss_pred EEEccCceEEEeecCCCCceEEEEccC--ccceeecCCCC-CCCCceeEEEeccCCCCCCeEEEEEE-e--------cCe
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPL--IKKYMTLPRPS-LNPRYLGFGVNSVSGHLDDFKVVTIS-V--------NAD 182 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~--t~~~~~LP~~~-~~~~~~~~g~d~~~~~~~~ykVv~~~-~--------~~~ 182 (383)
..+..+|.|.+..+. ...+++++||. +++|..+|+++ ..+...+.... .+...|+... . ...
T Consensus 14 ~~~~~~~~iyv~GG~-~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~ 87 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGS-AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-----DGNLYVFGGIGKNSEGLTQVFND 87 (357)
T ss_dssp EEEEETTEEEEECGG-GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-----TTEEEEECCEEECTTSCEEECCC
T ss_pred EEEEECCEEEEEeCc-CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-----CCEEEEEcCCCCCCCccceeecc
Confidence 334447877666542 34589999998 49999999988 55433222211 1111111111 0 457
Q ss_pred EEEEEcCCCceeeeccCCC-ceeeeccCcccceeEECceEEEEEeeccCC------------------------------
Q 016751 183 AEVYSLRSNSWKNIAYGFP-RSIEINRSHINSSVFLNGSVHWCARFSCYH------------------------------ 231 (383)
Q Consensus 183 ~~vyss~t~~W~~~~~~~p-~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~------------------------------ 231 (383)
+++|+..+++|+.+. .++ .++..+. ++..+|.+|.+++.....
T Consensus 88 v~~yd~~~~~W~~~~-~~~p~~r~~~~-----~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 88 VHKYNPKTNSWVKLM-SHAPMGMAGHV-----TFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp EEEEETTTTEEEECS-CCCSSCCSSEE-----EEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred EEEEeCCCCcEEECC-CCCCcccccce-----EEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 999999999999998 666 4443332 577999999998753000
Q ss_pred -CCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec
Q 016751 232 -DNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE 309 (383)
Q Consensus 232 -~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 309 (383)
.......+.+||+.+++|+.+ ++| .... ....++..+|+|+++++....+....++|.++-+.....|+++..++
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p-~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESP-WYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECS-SCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred cccCCcccEEEEeCCCCcEEECCCCC-CCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 000235899999999999998 666 4331 23677888999999987543222234577765322347899987775
Q ss_pred CCCceeEEEEEeeCCcEEEEEEeeC--Cc-------------------eEEEEEeCCCCeEEEEE
Q 016751 310 KPQRIWWPLGFTERGKIFIRGECRH--GG-------------------YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 310 ~~~~~~~~~~~~~~g~i~~~~~~~~--~~-------------------~~~~~yd~~t~~~~~v~ 353 (383)
.+.......++..++.||+. .+. .+ ..+.+||+++++|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFA--GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEE--CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred CCcccccceEEEECCEEEEE--cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 44311222234456788888 311 00 14889999999999984
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.42 E-value=2.7e-11 Score=111.16 Aligned_cols=201 Identities=10% Similarity=0.132 Sum_probs=129.4
Q ss_pred ceEEEEccCccceeecCCCC-CCCCceeEEEeccCCCCCCeEEEEEEe----------cCeEEEEEcCCCceeeeccCCC
Q 016751 133 SLIYLWNPLIKKYMTLPRPS-LNPRYLGFGVNSVSGHLDDFKVVTISV----------NADAEVYSLRSNSWKNIAYGFP 201 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~-~~~~~~~~g~d~~~~~~~~ykVv~~~~----------~~~~~vyss~t~~W~~~~~~~p 201 (383)
....++||.+++|...|.+. ..+...+.. .. .+..-|+.... ...+++|+..+++|+.++ .+|
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~--~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p 97 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNHSSIV--TQ---QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP-PLP 97 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSEEEEE--CS---SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS-CBS
T ss_pred cceEEECCCCCceecccCCccCCccceEEE--EE---CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC-CCC
Confidence 34789999999999854332 222222221 11 12111221100 123899999999999998 888
Q ss_pred ceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEEEEEec
Q 016751 202 RSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLCVFATI 280 (383)
Q Consensus 202 ~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~~v~~~ 280 (383)
.++..+. .+.++|.+|.+++... .+......+..||+.+++|+.+ ++| ..+ .....+..+|+|+++++.
T Consensus 98 ~~r~~~~-----~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r---~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 98 SARCLFG-----LGEVDDKIYVVAGKDL-QTEASLDSVLCYDPVAAKWSEVKNLP-IKV---YGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp SCBCSCE-----EEEETTEEEEEEEEBT-TTCCEEEEEEEEETTTTEEEEECCCS-SCE---ESCEEEEETTEEEEECCE
T ss_pred ccccccc-----eEEECCEEEEEcCccC-CCCcccceEEEEeCCCCCEeECCCCC-Ccc---cccEEEEECCEEEEEcCC
Confidence 7765443 6788999999998640 0122235799999999999998 677 554 445677789999999876
Q ss_pred CCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc--eEEEEEeCCCCeEEEEE
Q 016751 281 PNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG--YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 281 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~~~yd~~t~~~~~v~ 353 (383)
.......-.+|.++-. .++|+++..++... ....++..++.||+.|-..... ..+..||+++++|+.+.
T Consensus 168 ~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPK--KGDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp ESSSCBCCCEEEEETT--TTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CCCCCccceEEEEcCC--CCEEEECCCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 4321123457777653 46799987776554 2222333467888883110111 25899999999999984
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.33 E-value=4e-10 Score=105.01 Aligned_cols=242 Identities=12% Similarity=0.056 Sum_probs=145.2
Q ss_pred eecccC--CCcccccCC-CCCCCCCCCeeEEEccCceEEEeecC-C-------CCceEEEEccCccceeecCCCC-CCCC
Q 016751 89 GFYSTK--CKEFEDLCD-PPFRTQLADLDVVGSCNGVLCFCSNG-S-------DRSLIYLWNPLIKKYMTLPRPS-LNPR 156 (383)
Q Consensus 89 ~~~~~~--~~~~~~l~~-p~~~~~~~~~~~~~s~~Gll~~~~~~-~-------~~~~~~v~NP~t~~~~~LP~~~-~~~~ 156 (383)
..|+.. ...|..+.. |..+ ......+..+|.|.+..+. . ....++++||.+++|..+++++ ..+.
T Consensus 34 ~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~ 110 (357)
T 2uvk_A 34 YKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMA 110 (357)
T ss_dssp EEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCS
T ss_pred EEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccc
Confidence 356654 366776643 2111 1222344557777665432 0 1347999999999999999877 4433
Q ss_pred ceeEEEeccCCCCCCeEEEEEEe----------------------------------------cCeEEEEEcCCCceeee
Q 016751 157 YLGFGVNSVSGHLDDFKVVTISV----------------------------------------NADAEVYSLRSNSWKNI 196 (383)
Q Consensus 157 ~~~~g~d~~~~~~~~ykVv~~~~----------------------------------------~~~~~vyss~t~~W~~~ 196 (383)
..+... . .+ +++.+.. ...+++|+..+++|+.+
T Consensus 111 ~~~~~~--~---~~--~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 111 GHVTFV--H---NG--KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA 183 (357)
T ss_dssp SEEEEE--E---TT--EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE
T ss_pred cceEEE--E---CC--EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC
Confidence 322222 1 22 3333332 15899999999999999
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEEC--CCCeeeEe-CCCCCCCCCCCceEEEEeCCe
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDF--AKEIFQTV-MMPYDLSTDDADKYLNVFDGY 273 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~--~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~ 273 (383)
. .+|.+...... .+.++|.+|.+++.. ........+..||+ .+++|+.+ .+| .... .....++..+|+
T Consensus 184 ~-~~p~~~~~~~~----~~~~~~~iyv~GG~~--~~~~~~~~v~~~d~d~~~~~W~~~~~~~-~~~~-~~~~~~~~~~~~ 254 (357)
T 2uvk_A 184 G-ESPWYGTAGAA----VVNKGDKTWLINGEA--KPGLRTDAVFELDFTGNNLKWNKLAPVS-SPDG-VAGGFAGISNDS 254 (357)
T ss_dssp E-ECSSCCCBSCE----EEEETTEEEEECCEE--ETTEECCCEEEEECC---CEEEECCCSS-TTTC-CBSCEEEEETTE
T ss_pred C-CCCCCCccccc----EEEECCEEEEEeeec--CCCcccCceEEEEecCCCCcEEecCCCC-CCcc-cccceEEEECCE
Confidence 8 77765443222 788999999998754 11112356788876 89999987 454 3321 134557889999
Q ss_pred EEEEEecCCC----------------CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc-
Q 016751 274 LCVFATIPNN----------------TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG- 336 (383)
Q Consensus 274 L~~v~~~~~~----------------~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~- 336 (383)
|+++++.... ......+|+++-. ..+|+++..++.... ...++..+++||+.|=....+
T Consensus 255 iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~--~~~~~~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRA--YGVSLPWNNSLLIIGGETAGGK 330 (357)
T ss_dssp EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCB--SSEEEEETTEEEEEEEECGGGC
T ss_pred EEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCcc--cceeEEeCCEEEEEeeeCCCCC
Confidence 9999875321 0112456666542 468999988887652 223344567888883110111
Q ss_pred --eEEEEEeCCCCeEEEEE
Q 016751 337 --YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 337 --~~~~~yd~~t~~~~~v~ 353 (383)
..++.+++++++|.+..
T Consensus 331 ~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEEEEEEC-CCSCEEEC
T ss_pred EeeeEEEEEEcCcEeEeee
Confidence 26889999999998763
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.23 E-value=6.4e-10 Score=112.88 Aligned_cols=211 Identities=14% Similarity=0.118 Sum_probs=134.4
Q ss_pred cCceEEEeecC--CCCceEEEEccCccceeecC-C-----CCCCCCceeEEEeccCCCCCCeEEEEEEe-------cCeE
Q 016751 119 CNGVLCFCSNG--SDRSLIYLWNPLIKKYMTLP-R-----PSLNPRYLGFGVNSVSGHLDDFKVVTISV-------NADA 183 (383)
Q Consensus 119 ~~Gll~~~~~~--~~~~~~~v~NP~t~~~~~LP-~-----~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-------~~~~ 183 (383)
.+|.|++..+. .....++++||.+++|..++ + ++..+...+...-.. ++ +++.+.. ...+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~----~~-~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR----NN-QLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT----TT-EEEEECCBSSTTCBCCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc----CC-EEEEEcCCCCCCCccccE
Confidence 56666665532 12457999999999999998 5 344333333332210 12 2333332 3579
Q ss_pred EEEEcCCCceeeeccCCCceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeC----CCCCC
Q 016751 184 EVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVM----MPYDL 258 (383)
Q Consensus 184 ~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~----lP~~~ 258 (383)
++|+..+++|+.++ .+|.++..+. ++.+ +|.+|.+++.. ... .+..||+.+++|+.+. +| ..
T Consensus 471 ~~yd~~t~~W~~~~-~~p~~R~~h~-----~~~~~~~~iyv~GG~~----~~~--~v~~yd~~t~~W~~~~~~g~~p-~~ 537 (695)
T 2zwa_A 471 WIFDMKTREWSMIK-SLSHTRFRHS-----ACSLPDGNVLILGGVT----EGP--AMLLYNVTEEIFKDVTPKDEFF-QN 537 (695)
T ss_dssp EEEETTTTEEEECC-CCSBCCBSCE-----EEECTTSCEEEECCBC----SSC--SEEEEETTTTEEEECCCSSGGG-GS
T ss_pred EEEeCCCCcEEECC-CCCCCcccce-----EEEEcCCEEEEECCCC----CCC--CEEEEECCCCceEEccCCCCCC-Cc
Confidence 99999999999998 8887765544 5554 99999998865 112 7999999999999985 56 44
Q ss_pred CCCCCceEEEEeC---CeEEEEEecCCCC-ccEEEEEEeccCCCCCC------eEEEEEecCCCceeEEEEEeeCCcEEE
Q 016751 259 STDDADKYLNVFD---GYLCVFATIPNNT-FRSYELWVMKEYGLTES------WTKLYTIEKPQRIWWPLGFTERGKIFI 328 (383)
Q Consensus 259 ~~~~~~~~l~~~~---g~L~~v~~~~~~~-~~~l~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~g~i~~ 328 (383)
+ .....++++ |+|+++++...++ ...-.+|.++-. .+. |+++..++..........+.+++.||+
T Consensus 538 r---~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 538 S---LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp C---CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEE
T ss_pred c---cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEE
Confidence 4 233334444 8999999874321 123456666542 234 888877642221222233334478988
Q ss_pred EEEeeCC-------ceEEEEEeCCCCeEEEEEE
Q 016751 329 RGECRHG-------GYGLLVYNPHSDTFKCIGV 354 (383)
Q Consensus 329 ~~~~~~~-------~~~~~~yd~~t~~~~~v~~ 354 (383)
. ++.. ...+.+||+++++|+.+.+
T Consensus 613 ~--GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 613 V--GGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp E--CCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred E--CCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 8 4211 1159999999999996644
No 16
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.10 E-value=6.9e-11 Score=77.75 Aligned_cols=42 Identities=29% Similarity=0.585 Sum_probs=38.4
Q ss_pred cCCCCCCHHHHHHHHhcCChhhhHHhhccchhhHhhcCChHH
Q 016751 21 CSSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTF 62 (383)
Q Consensus 21 ~~~~~Lp~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~s~~F 62 (383)
..+..||+|++.+||++||++++.++++|||+|+.++.++.|
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 467899999999999999999999999999999999998876
No 17
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.05 E-value=1.2e-10 Score=103.93 Aligned_cols=50 Identities=22% Similarity=0.416 Sum_probs=46.7
Q ss_pred cCCCCCCHHHHHHHHhcCChhhhH-HhhccchhhHhhcCChHHHHHHHhcC
Q 016751 21 CSSFRLPEDVMIDIFLRLEVKNLA-RLRCVCKSWNTLLTSKTFVEIHLNQS 70 (383)
Q Consensus 21 ~~~~~Lp~Dll~eIL~rLP~~~l~-r~r~VcK~W~~li~s~~F~~~~~~~~ 70 (383)
..+..||+|+|.+||+|||+++|+ ||++|||+|+.+++++.|-+.+..+.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 367899999999999999999999 99999999999999999999988766
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.99 E-value=2.2e-06 Score=81.76 Aligned_cols=282 Identities=13% Similarity=0.154 Sum_probs=142.5
Q ss_pred ccCCCCCCHHHHHHHHhcCChhhhHHhhccchhhHhhcCChHHHHHHHhcCCC-CCCcEEEeec-C---CCC-ceeeccc
Q 016751 20 KCSSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQSMR-NPRPLLFRHG-I---SPS-YLGFYST 93 (383)
Q Consensus 20 ~~~~~~Lp~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~s~~F~~~~~~~~~~-~~~~~~~~~~-~---~~~-~~~~~~~ 93 (383)
...+..||+|++..||+.|++++|.++.+|||+|+.++.++.+-+........ .+...-.... . ... ....|..
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 34678999999999999999999999999999999999988766655432211 1110000000 0 000 0001110
Q ss_pred ---CCCcccccCC--CC-CCCCCC-CeeEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccC
Q 016751 94 ---KCKEFEDLCD--PP-FRTQLA-DLDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVS 166 (383)
Q Consensus 94 ---~~~~~~~l~~--p~-~~~~~~-~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~ 166 (383)
....|..-.. .. ...... -...+...+.+|+... .++.+.+||..+++...--.... .....+.+++
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~---~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~-- 169 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS---DDNTLKVWSAVTGKCLRTLVGHT-GGVWSSQMRD-- 169 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE---TTSCEEEEETTTCCEEEECCCCS-SCEEEEEEET--
T ss_pred hhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE---CCCcEEEEECCCCcEEEEEcCCC-CCEEEEEecC--
Confidence 0011111111 00 000111 1233444455555544 68899999998877554222111 1113344432
Q ss_pred CCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCC
Q 016751 167 GHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAK 246 (383)
Q Consensus 167 ~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~ 246 (383)
+ .++.......+.+|+..++.-...-....... . ++..+|.....+..+ ..|..+|+.+
T Consensus 170 ----~-~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v-----~---~~~~~~~~l~s~s~d--------g~i~~wd~~~ 228 (445)
T 2ovr_B 170 ----N-IIISGSTDRTLKVWNAETGECIHTLYGHTSTV-----R---CMHLHEKRVVSGSRD--------ATLRVWDIET 228 (445)
T ss_dssp ----T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----E---EEEEETTEEEEEETT--------SEEEEEESSS
T ss_pred ----C-EEEEEeCCCeEEEEECCcCcEEEEECCCCCcE-----E---EEEecCCEEEEEeCC--------CEEEEEECCC
Confidence 1 23333336688999998874322110111111 1 444455554444433 5899999987
Q ss_pred CeeeE-eCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc
Q 016751 247 EIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK 325 (383)
Q Consensus 247 ~~~~~-i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~ 325 (383)
.+-.. +... . ........+|...+++..+ ..+.+|.++.. ..+..+.........+.+ ++.
T Consensus 229 ~~~~~~~~~~-~-----~~v~~~~~~~~~l~~~~~d----g~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~~ 290 (445)
T 2ovr_B 229 GQCLHVLMGH-V-----AAVRCVQYDGRRVVSGAYD----FMVKVWDPETE------TCLHTLQGHTNRVYSLQF--DGI 290 (445)
T ss_dssp CCEEEEEECC-S-----SCEEEEEECSSCEEEEETT----SCEEEEEGGGT------EEEEEECCCSSCEEEEEE--CSS
T ss_pred CcEEEEEcCC-c-----ccEEEEEECCCEEEEEcCC----CEEEEEECCCC------cEeEEecCCCCceEEEEE--CCC
Confidence 65432 2221 1 1122233367666666555 48899987651 233344322111222222 454
Q ss_pred EEEEEEeeCCceEEEEEeCCCCeE
Q 016751 326 IFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 326 i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
.++. ...++ .+..||+++++.
T Consensus 291 ~l~~--~~~d~-~i~i~d~~~~~~ 311 (445)
T 2ovr_B 291 HVVS--GSLDT-SIRVWDVETGNC 311 (445)
T ss_dssp EEEE--EETTS-CEEEEETTTCCE
T ss_pred EEEE--EeCCC-eEEEEECCCCCE
Confidence 4444 32444 378888877654
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.96 E-value=2.9e-08 Score=100.25 Aligned_cols=214 Identities=14% Similarity=0.121 Sum_probs=131.1
Q ss_pred CceEEEeecCCC---------CceEEEEccCccceeecCCCCCCCCc--eeEEEeccCCCCCCeEEEEEEe--cCeEEEE
Q 016751 120 NGVLCFCSNGSD---------RSLIYLWNPLIKKYMTLPRPSLNPRY--LGFGVNSVSGHLDDFKVVTISV--NADAEVY 186 (383)
Q Consensus 120 ~Gll~~~~~~~~---------~~~~~v~NP~t~~~~~LP~~~~~~~~--~~~g~d~~~~~~~~ykVv~~~~--~~~~~vy 186 (383)
+|.|++..+... ...+.++||.|++|..+++++..+.. .+..+.. .+ +++.+.. ...+++|
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~----~g--~lyv~GG~~~~~v~~y 270 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG----NG--QIVVTGGNDAKKTSLY 270 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT----TS--CEEEECSSSTTCEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC----CC--CEEEeCCCCCCceEEe
Confidence 787766643211 12688999999999999877654432 2222221 11 2333332 4589999
Q ss_pred EcCCCceeeeccCCCceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe------CCCCCCC
Q 016751 187 SLRSNSWKNIAYGFPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV------MMPYDLS 259 (383)
Q Consensus 187 ss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i------~lP~~~~ 259 (383)
+..+++|+.++ .++.++..+. ++.+ +|++|.+++.. .+......+..||+.+++|+.+ ++| ...
T Consensus 271 d~~t~~W~~~~-~~~~~R~~~s-----~~~~~dg~iyv~GG~~--~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~-~~~ 341 (656)
T 1k3i_A 271 DSSSDSWIPGP-DMQVARGYQS-----SATMSDGRVFTIGGSW--SGGVFEKNGEVYSPSSKTWTSLPNAKVNPML-TAD 341 (656)
T ss_dssp EGGGTEEEECC-CCSSCCSSCE-----EEECTTSCEEEECCCC--CSSSCCCCEEEEETTTTEEEEETTSCSGGGC-CCC
T ss_pred cCcCCceeECC-CCCccccccc-----eEEecCCeEEEEeCcc--cCCcccccceEeCCCCCcceeCCCccccccc-ccc
Confidence 99999999998 8887765443 5677 99999998842 1122346799999999999986 233 221
Q ss_pred C------CCC-----------------------------------------------ceEEEE----eCCeEEEEEecCC
Q 016751 260 T------DDA-----------------------------------------------DKYLNV----FDGYLCVFATIPN 282 (383)
Q Consensus 260 ~------~~~-----------------------------------------------~~~l~~----~~g~L~~v~~~~~ 282 (383)
. ++. ....++ .+|+|+++++...
T Consensus 342 ~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 342 KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 0 000 001222 3789999887532
Q ss_pred C-----CccEEEEEEeccCCCCCCeEEEE--EecCCCceeEEEEEeeCCcEEEEEEeeCC----------ceEEEEEeCC
Q 016751 283 N-----TFRSYELWVMKEYGLTESWTKLY--TIEKPQRIWWPLGFTERGKIFIRGECRHG----------GYGLLVYNPH 345 (383)
Q Consensus 283 ~-----~~~~l~iW~l~~~~~~~~W~~~~--~i~~~~~~~~~~~~~~~g~i~~~~~~~~~----------~~~~~~yd~~ 345 (383)
. ......++..+- ....|.++. .++.... .....+..+|+||+. .+.+ ...+.+||++
T Consensus 422 ~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~mp~~R~-~~~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEP--GTSPNTVFASNGLYFART-FHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp SSSSBCCCCEEEEECCST--TSCCEEEECTTCCSSCCB-SCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CCCCCcCCcceEEEcCCC--CCCCeeEEccCCCCCCcc-cCCeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCC
Confidence 1 011224554443 346799876 6665541 222233447889988 4211 0158999999
Q ss_pred CCeEEEEE
Q 016751 346 SDTFKCIG 353 (383)
Q Consensus 346 t~~~~~v~ 353 (383)
+++|+.+.
T Consensus 497 t~~W~~~~ 504 (656)
T 1k3i_A 497 QDTFYKQN 504 (656)
T ss_dssp GTEEEECC
T ss_pred CCceeecC
Confidence 99999874
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.92 E-value=2.5e-06 Score=81.72 Aligned_cols=291 Identities=12% Similarity=0.156 Sum_probs=142.1
Q ss_pred CCCCCCHHHHHHHHhcCChhhhHHhhccchhhHhhcCC-hHHHHHHH-hcCCCCCCcE------EEeecCCCCce----e
Q 016751 22 SSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTS-KTFVEIHL-NQSMRNPRPL------LFRHGISPSYL----G 89 (383)
Q Consensus 22 ~~~~Lp~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~s-~~F~~~~~-~~~~~~~~~~------~~~~~~~~~~~----~ 89 (383)
.+..||+|++.+||+.||+++|+++..|||+|+.++.+ +..-+... +.....+... +...++..... .
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDRLRL 93 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchhhHH
Confidence 35679999999999999999999999999999999998 65444433 2211111000 00000000000 0
Q ss_pred ecccC---CCcccccCCCC----CCCCCCC-eeEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEE
Q 016751 90 FYSTK---CKEFEDLCDPP----FRTQLAD-LDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFG 161 (383)
Q Consensus 90 ~~~~~---~~~~~~l~~p~----~~~~~~~-~~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g 161 (383)
.|... ...|....... ....... ...+...+++++... .++.+.+||..+++...--... ......+.
T Consensus 94 ~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs---~dg~i~vwd~~~~~~~~~~~~h-~~~V~~l~ 169 (464)
T 3v7d_B 94 SFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGA---DDKMIRVYDSINKKFLLQLSGH-DGGVWALK 169 (464)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEE---TTSCEEEEETTTTEEEEEECCC-SSCEEEEE
T ss_pred HHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEc---CCCcEEEEECCCCcEEEEEeCC-CcCEEEEE
Confidence 01000 01111111100 0001112 233444555555554 6889999998887654421111 11124555
Q ss_pred EeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEE
Q 016751 162 VNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLI 239 (383)
Q Consensus 162 ~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~i 239 (383)
+.+. + .++.......+.+++.+++.-...-.......... .+. -+|.....+..+ ..|
T Consensus 170 ~~~~-----~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l------~~~~~~~~~~l~s~s~d--------~~i 229 (464)
T 3v7d_B 170 YAHG-----G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL------DIVEYKNIKYIVTGSRD--------NTL 229 (464)
T ss_dssp ECST-----T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE------EEEESSSCEEEEEEETT--------SCE
T ss_pred EcCC-----C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE------EEecCCCCCEEEEEcCC--------CcE
Confidence 5443 2 44444447789999998875322210111111100 111 133433333332 478
Q ss_pred EEEECCCCeeeEe-C----------CCCCC-------CCCC-CceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCC
Q 016751 240 VSFDFAKEIFQTV-M----------MPYDL-------STDD-ADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTE 300 (383)
Q Consensus 240 l~fD~~~~~~~~i-~----------lP~~~-------~~~~-~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~ 300 (383)
..+|+.+..-... . .| .. .... ....-...+|.+.+++..+ ..+.+|.+..
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i~vwd~~~----- 299 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTP-EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD----NTLIVWDVAQ----- 299 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCG-GGCTTEEEEECCCSSCEEEEEEETTEEEEEETT----SCEEEEETTT-----
T ss_pred EEeeCCCCcccccccccCCcceEeecc-CCCeEEEEEccCccceEEEEcCCCCEEEEEeCC----CeEEEEECCC-----
Confidence 8888876543211 0 00 00 0000 1111223345555555544 4899998764
Q ss_pred CeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 301 SWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 301 ~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
...+..+.........+.+..++..++. ...++ .+..||+++++..
T Consensus 300 -~~~~~~~~~~~~~v~~~~~~~~~~~l~s--g~~dg-~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 300 -MKCLYILSGHTDRIYSTIYDHERKRCIS--ASMDT-TIRIWDLENGELM 345 (464)
T ss_dssp -TEEEEEECCCSSCEEEEEEETTTTEEEE--EETTS-CEEEEETTTTEEE
T ss_pred -CcEEEEecCCCCCEEEEEEcCCCCEEEE--EeCCC-cEEEEECCCCcEE
Confidence 1233344322213455666667766666 42455 3899999887643
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.77 E-value=3.3e-06 Score=80.39 Aligned_cols=283 Identities=14% Similarity=0.157 Sum_probs=139.4
Q ss_pred CCCCCCHH----HHHHHHhcCChhhhHHhhccchhhHhhcCChHHHHHHHhcC-C----------CCCC-cEEEee-c--
Q 016751 22 SSFRLPED----VMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQS-M----------RNPR-PLLFRH-G-- 82 (383)
Q Consensus 22 ~~~~Lp~D----ll~eIL~rLP~~~l~r~r~VcK~W~~li~s~~F~~~~~~~~-~----------~~~~-~~~~~~-~-- 82 (383)
.+..||+| ++..||+.|++++|.++.+|||+|+.++.++.+=+...... . ...+ ..++.. .
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 89 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPD 89 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC------
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCC
Confidence 34679999 99999999999999999999999999998754433222211 0 0000 000110 0
Q ss_pred ---CCCC-ceeeccc-------CCCcccccCCCC-----CCCCCCCeeEEEccCceEEEeecCCCCceEEEEccCcccee
Q 016751 83 ---ISPS-YLGFYST-------KCKEFEDLCDPP-----FRTQLADLDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYM 146 (383)
Q Consensus 83 ---~~~~-~~~~~~~-------~~~~~~~l~~p~-----~~~~~~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~ 146 (383)
+... ...+|.. ....|..-.... .......+..+...+..++... .++.+.++|..+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~---~dg~i~iwd~~~~~~~ 166 (435)
T 1p22_A 90 GNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGL---RDNTIKIWDKNTLECK 166 (435)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEE---SSSCEEEEESSSCCEE
T ss_pred CCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEe---CCCeEEEEeCCCCeEE
Confidence 0000 0001110 001111111000 0001123334444444444444 6788999999887755
Q ss_pred ecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEe
Q 016751 147 TLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCAR 226 (383)
Q Consensus 147 ~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~ 226 (383)
..-..... ....+.++. + .++.......+.+|+..++.-...-....... . ++..++.....+.
T Consensus 167 ~~~~~h~~-~v~~l~~~~------~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-----~---~l~~~~~~l~s~s 230 (435)
T 1p22_A 167 RILTGHTG-SVLCLQYDE------R-VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV-----L---HLRFNNGMMVTCS 230 (435)
T ss_dssp EEECCCSS-CEEEEECCS------S-EEEEEETTSCEEEEESSSCCEEEEECCCCSCE-----E---EEECCTTEEEEEE
T ss_pred EEEcCCCC-cEEEEEECC------C-EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE-----E---EEEEcCCEEEEee
Confidence 43221111 113333321 1 23333336689999998875422210111111 1 4444555444444
Q ss_pred eccCCCCCCCcEEEEEECCCCeeeEe--CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEE
Q 016751 227 FSCYHDNSCPWLIVSFDFAKEIFQTV--MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTK 304 (383)
Q Consensus 227 ~~~~~~~~~~~~il~fD~~~~~~~~i--~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~ 304 (383)
.+ ..|..+|+.+..-... .+. ... ........+|...+++..+ ..+.+|.++.. ..
T Consensus 231 ~d--------g~i~vwd~~~~~~~~~~~~~~-~~~---~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~------~~ 288 (435)
T 1p22_A 231 KD--------RSIAVWDMASPTDITLRRVLV-GHR---AAVNVVDFDDKYIVSASGD----RTIKVWNTSTC------EF 288 (435)
T ss_dssp TT--------SCEEEEECSSSSCCEEEEEEC-CCS---SCEEEEEEETTEEEEEETT----SEEEEEETTTC------CE
T ss_pred CC--------CcEEEEeCCCCCCceeeeEec-CCC---CcEEEEEeCCCEEEEEeCC----CeEEEEECCcC------cE
Confidence 33 5789999876543211 111 111 1222233366666666555 48999988752 23
Q ss_pred EEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 305 LYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
+..+.........+.+ ++..++. ...++ .+..||+++++..
T Consensus 289 ~~~~~~~~~~v~~~~~--~~~~l~~--g~~dg-~i~iwd~~~~~~~ 329 (435)
T 1p22_A 289 VRTLNGHKRGIACLQY--RDRLVVS--GSSDN-TIRLWDIECGACL 329 (435)
T ss_dssp EEEEECCSSCEEEEEE--ETTEEEE--EETTS-CEEEEETTTCCEE
T ss_pred EEEEcCCCCcEEEEEe--CCCEEEE--EeCCC-eEEEEECCCCCEE
Confidence 3344322211222333 3555555 32455 4999999987643
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.68 E-value=4.5e-07 Score=92.00 Aligned_cols=156 Identities=7% Similarity=-0.000 Sum_probs=107.0
Q ss_pred cCeEEEEEcCCCceeeeccC-----CCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe
Q 016751 180 NADAEVYSLRSNSWKNIAYG-----FPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV 252 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~-----~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i 252 (383)
...+++|+..+++|+.+..+ +|.++..+. ++.+ +|.+|.+++.. ........+..||+.+++|+.+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs-----~~~~~~~~~lyv~GG~~--~~~~~~~dv~~yd~~t~~W~~~ 483 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHT-----FTTISRNNQLLLIGGRK--APHQGLSDNWIFDMKTREWSMI 483 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCE-----EEEETTTTEEEEECCBS--STTCBCCCCEEEETTTTEEEEC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceE-----EEEEccCCEEEEEcCCC--CCCCccccEEEEeCCCCcEEEC
Confidence 45799999999999988722 455554433 6788 99999998865 1111345799999999999998
Q ss_pred -CCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEE---ecCCCceeEEEEEeeC-CcE
Q 016751 253 -MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYT---IEKPQRIWWPLGFTER-GKI 326 (383)
Q Consensus 253 -~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~---i~~~~~~~~~~~~~~~-g~i 326 (383)
++| ..+ .....+.. +|+|+++++.... . .+|.++-. .+.|+.+.. ++........+.+..+ +.|
T Consensus 484 ~~~p-~~R---~~h~~~~~~~~~iyv~GG~~~~---~-~v~~yd~~--t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 484 KSLS-HTR---FRHSACSLPDGNVLILGGVTEG---P-AMLLYNVT--EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp CCCS-BCC---BSCEEEECTTSCEEEECCBCSS---C-SEEEEETT--TTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCC-CCc---ccceEEEEcCCEEEEECCCCCC---C-CEEEEECC--CCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 677 555 45566665 9999999987763 2 77777653 467998765 4444311221222333 678
Q ss_pred EEEEEeeC--Cc----eEEEEEeCCCCe------EEEEEE
Q 016751 327 FIRGECRH--GG----YGLLVYNPHSDT------FKCIGV 354 (383)
Q Consensus 327 ~~~~~~~~--~~----~~~~~yd~~t~~------~~~v~~ 354 (383)
|+. ++. ++ ..+.+||+++++ |+.+.-
T Consensus 554 yv~--GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 554 IIL--GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EEE--CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EEE--CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 888 421 11 269999999999 887743
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.66 E-value=1.6e-06 Score=87.33 Aligned_cols=228 Identities=12% Similarity=0.096 Sum_probs=130.0
Q ss_pred eecccCCCcccccCCCCCCCCCCCeeEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCC
Q 016751 89 GFYSTKCKEFEDLCDPPFRTQLADLDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGH 168 (383)
Q Consensus 89 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~ 168 (383)
..|++....|..+..................+|.|++..+. ....+.++||.|++|..+++++..+.+.+...-+.
T Consensus 222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~-~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d--- 297 (656)
T 1k3i_A 222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN-DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD--- 297 (656)
T ss_dssp EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS-STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT---
T ss_pred EEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC-CCCceEEecCcCCceeECCCCCccccccceEEecC---
Confidence 46777777776654221111111112344578888777642 23479999999999999999887765533332211
Q ss_pred CCCeEEEEEEe-------cCeEEEEEcCCCceeeecc----CCCceee------------ec------------------
Q 016751 169 LDDFKVVTISV-------NADAEVYSLRSNSWKNIAY----GFPRSIE------------IN------------------ 207 (383)
Q Consensus 169 ~~~ykVv~~~~-------~~~~~vyss~t~~W~~~~~----~~p~~~~------------~~------------------ 207 (383)
+ |++.+.. ...+|+|+..+++|+.++. .++.... +.
T Consensus 298 -g--~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 298 -G--RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp -S--CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred -C--eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeee
Confidence 1 2333321 3579999999999998630 2221100 00
Q ss_pred --------------c-------Ccccc-eeE---ECceEEEEEeeccCCCCCCCc---EEEEEECCCCeeeEe---CCCC
Q 016751 208 --------------R-------SHINS-SVF---LNGSVHWCARFSCYHDNSCPW---LIVSFDFAKEIFQTV---MMPY 256 (383)
Q Consensus 208 --------------~-------~~~~~-~v~---~~G~lYw~~~~~~~~~~~~~~---~il~fD~~~~~~~~i---~lP~ 256 (383)
. ....+ ++. .+|.+|.+++.....+..... .+..||+.+++|..+ .+|
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp- 453 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY- 453 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS-
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC-
Confidence 0 00011 222 489999998753101111122 788999999999887 566
Q ss_pred CCCCCCCceEEEEe-CCeEEEEEecCCC-----CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEE
Q 016751 257 DLSTDDADKYLNVF-DGYLCVFATIPNN-----TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIR 329 (383)
Q Consensus 257 ~~~~~~~~~~l~~~-~g~L~~v~~~~~~-----~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~ 329 (383)
..+ .....+.+ +|+|+++++.... ......++.++-. .++|+.+..++..........+..+|+||+.
T Consensus 454 ~~R---~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~--t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~ 527 (656)
T 1k3i_A 454 FAR---TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE--QDTFYKQNPNSIVRVYHSISLLLPDGRVFNG 527 (656)
T ss_dssp SCC---BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG--GTEEEECCCCSSCCCTTEEEEECTTSCEEEE
T ss_pred CCc---ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC--CCceeecCCCCCccccccHhhcCCCcEEEec
Confidence 444 33455666 8999999875421 0112334444321 3679987777665432333333457888888
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.76 E-value=2.1e-05 Score=69.48 Aligned_cols=49 Identities=24% Similarity=0.337 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHhcCChhhhHHhhccchhhHhhcCChHHHHHHHhcC
Q 016751 22 SSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKTFVEIHLNQS 70 (383)
Q Consensus 22 ~~~~Lp~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~s~~F~~~~~~~~ 70 (383)
.++.||+|++..||+.|++++|+++.+|||+||.++.++..=+.+..+.
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 3568999999999999999999999999999999999998777666654
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.59 E-value=3e-05 Score=71.05 Aligned_cols=42 Identities=29% Similarity=0.560 Sum_probs=37.8
Q ss_pred ccCCCCCCHHHHHHHHhcCChhhhHHhhccchhhHhhcCChH
Q 016751 20 KCSSFRLPEDVMIDIFLRLEVKNLARLRCVCKSWNTLLTSKT 61 (383)
Q Consensus 20 ~~~~~~Lp~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~s~~ 61 (383)
...+..||+|++.+||.+|+.+++.+++.|||+|+.++.++.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 346899999999999999999999999999999999987654
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.99 E-value=0.00032 Score=69.38 Aligned_cols=36 Identities=28% Similarity=0.590 Sum_probs=29.5
Q ss_pred cCCCCCCHHHHHHHHhcCC-hhhhHHhhccchhhHhh
Q 016751 21 CSSFRLPEDVMIDIFLRLE-VKNLARLRCVCKSWNTL 56 (383)
Q Consensus 21 ~~~~~Lp~Dll~eIL~rLP-~~~l~r~r~VcK~W~~l 56 (383)
..++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4578999999999999999 99999999999999988
No 27
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.19 Score=45.37 Aligned_cols=189 Identities=7% Similarity=0.053 Sum_probs=98.7
Q ss_pred CCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~ 209 (383)
.++.+.|||........+....... ....+.+.+. .+.-.++.......+.+|+..++.|.... ..........
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~v~- 105 (379)
T 3jrp_A 31 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP---KFGTILASCSYDGKVLIWKEENGRWSQIA-VHAVHSASVN- 105 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG---GGCSEEEEEETTSCEEEEEEETTEEEEEE-EECCCSSCEE-
T ss_pred CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC---CCCCEEEEeccCCEEEEEEcCCCceeEee-eecCCCcceE-
Confidence 4667788877633333222222221 1245555443 22334444443668999999999887655 2221110001
Q ss_pred cccceeEE--C--ceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEe--------------
Q 016751 210 HINSSVFL--N--GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVF-------------- 270 (383)
Q Consensus 210 ~~~~~v~~--~--G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~-------------- 270 (383)
++.+ + |.+...+... ..|..||+.+..- ....+. .... ....+.-.
T Consensus 106 ----~~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~~~~ 170 (379)
T 3jrp_A 106 ----SVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIID-AHAI--GVNSASWAPATIEEDGEHNGTK 170 (379)
T ss_dssp ----EEEECCGGGCSEEEEEETT--------SEEEEEECCTTSCCCEEEEE-CCTT--CEEEEEECCCC----------C
T ss_pred ----EEEeCCCCCCCEEEEecCC--------CcEEEEecCCCCceeeEEec-CCCC--ceEEEEEcCccccccccccCCC
Confidence 2222 2 4444444433 5888999877622 222211 1110 11122222
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeC---CcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTER---GKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
++.+.++...+ ..+.+|.+... ...|.....+.........+.+..+ +.+++. ...++ .+.+||++++
T Consensus 171 ~~~~l~~~~~d----g~i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s--~~~dg-~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGAD----NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDR-TCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEETT----SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EETTS-CEEEEEESST
T ss_pred CCCEEEEEeCC----CeEEEEEecCC--CcceeeEEEEecccCcEeEEEECCCCCCCCeEEE--EeCCC-EEEEEeCCCC
Confidence 36666666555 48999999753 2456666666543223455666666 666666 43455 3899998886
Q ss_pred e
Q 016751 348 T 348 (383)
Q Consensus 348 ~ 348 (383)
+
T Consensus 242 ~ 242 (379)
T 3jrp_A 242 Q 242 (379)
T ss_dssp T
T ss_pred C
Confidence 3
No 28
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.63 E-value=0.00082 Score=66.40 Aligned_cols=36 Identities=19% Similarity=0.420 Sum_probs=32.8
Q ss_pred cCCCCCCHHHHHHHHhcC-ChhhhHHhhccchhhHhh
Q 016751 21 CSSFRLPEDVMIDIFLRL-EVKNLARLRCVCKSWNTL 56 (383)
Q Consensus 21 ~~~~~Lp~Dll~eIL~rL-P~~~l~r~r~VcK~W~~l 56 (383)
.....||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 11 ~~~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 11 LSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp -CCCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred hccCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 345789999999999999 899999999999999987
No 29
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.45 E-value=0.47 Score=42.60 Aligned_cols=199 Identities=9% Similarity=0.054 Sum_probs=106.1
Q ss_pred CceEEEeec--CCCCceEEEEccCccceee-cC----CCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 120 NGVLCFCSN--GSDRSLIYLWNPLIKKYMT-LP----RPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 120 ~Gll~~~~~--~~~~~~~~v~NP~t~~~~~-LP----~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
+|++.+..+ ..+...+.++||.|++... +. ..+......++.++. +...+.......+.+++..+++
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~------~~lyv~~~~~~~v~viD~~t~~ 75 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD------GIGWIVVNNSHVIFAIDINTFK 75 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET------TEEEEEEGGGTEEEEEETTTCC
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC------CEEEEEEcCCCEEEEEECcccE
Confidence 455555542 1236789999999988754 21 001111112233332 1222222225689999998876
Q ss_pred e-eeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCCC-CCCceEEEE
Q 016751 193 W-KNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLST-DDADKYLNV 269 (383)
Q Consensus 193 W-~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~-~~~~~~l~~ 269 (383)
- +.++ ....+... .+.-+|.+|+..... ..|..+|+.+.+.. .++++ .... ......++.
T Consensus 76 ~~~~i~-~~~~p~~i-------~~~~~g~lyv~~~~~--------~~v~~iD~~t~~~~~~i~~g-~~~~~~~~p~~i~~ 138 (328)
T 3dsm_A 76 EVGRIT-GFTSPRYI-------HFLSDEKAYVTQIWD--------YRIFIINPKTYEITGYIECP-DMDMESGSTEQMVQ 138 (328)
T ss_dssp EEEEEE-CCSSEEEE-------EEEETTEEEEEEBSC--------SEEEEEETTTTEEEEEEECT-TCCTTTCBCCCEEE
T ss_pred EEEEcC-CCCCCcEE-------EEeCCCeEEEEECCC--------CeEEEEECCCCeEEEEEEcC-CccccCCCcceEEE
Confidence 5 3333 22111110 233588998876332 48999999988764 45555 3110 001123444
Q ss_pred eCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc----------eEE
Q 016751 270 FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG----------YGL 339 (383)
Q Consensus 270 ~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~----------~~~ 339 (383)
.+|+|++...... ..+.++-.+. . ..+.+++... ...-+.+..+|++++. . .+. ..+
T Consensus 139 ~~~~lyv~~~~~~---~~v~viD~~t----~--~~~~~i~~g~-~p~~i~~~~dG~l~v~--~-~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 139 YGKYVYVNCWSYQ---NRILKIDTET----D--KVVDELTIGI-QPTSLVMDKYNKMWTI--T-DGGYEGSPYGYEAPSL 205 (328)
T ss_dssp ETTEEEEEECTTC---CEEEEEETTT----T--EEEEEEECSS-CBCCCEECTTSEEEEE--B-CCBCTTCSSCBCCCEE
T ss_pred ECCEEEEEcCCCC---CEEEEEECCC----C--eEEEEEEcCC-CccceEEcCCCCEEEE--E-CCCccCCccccCCceE
Confidence 7889988864222 3555554443 2 2223444321 1223455677898888 5 322 259
Q ss_pred EEEeCCCCeEE-EEEE
Q 016751 340 LVYNPHSDTFK-CIGV 354 (383)
Q Consensus 340 ~~yd~~t~~~~-~v~~ 354 (383)
+.+|++|+++. .+.+
T Consensus 206 ~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEECCCCeEEEEEec
Confidence 99999999876 3444
No 30
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.93 E-value=0.8 Score=40.31 Aligned_cols=207 Identities=13% Similarity=0.140 Sum_probs=105.7
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
...+|.|+..+. ....++.+||.+++...+..+. ...++.+++. .. + ++. ....+.+|+.++++++.+
T Consensus 21 ~~~~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~d---G~-l-~v~--~~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 21 EEVSNSLLFVDI--PAKKVCRWDSFTKQVQRVTMDA---PVSSVALRQS---GG-Y-VAT--IGTKFCALNWKEQSAVVL 88 (297)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTTCCEEEEECSS---CEEEEEEBTT---SS-E-EEE--ETTEEEEEETTTTEEEEE
T ss_pred ECCCCEEEEEEC--CCCEEEEEECCCCcEEEEeCCC---ceEEEEECCC---CC-E-EEE--ECCeEEEEECCCCcEEEE
Confidence 344566666553 5678999999998765543321 1245667765 33 2 222 266899999999988776
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCC---CCCCCcEEEEEECCCCeeeEe---CCCCCCCCCCCceEEEEe
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYH---DNSCPWLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~---~~~~~~~il~fD~~~~~~~~i---~lP~~~~~~~~~~~l~~~ 270 (383)
. ..+......... ...+.-+|.+|+........ .......|..+|.....-... ..| ..++..
T Consensus 89 ~-~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p---------ngi~~s 157 (297)
T 3g4e_A 89 A-TVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS---------NGLDWS 157 (297)
T ss_dssp E-ECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE---------EEEEEC
T ss_pred E-ecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc---------cceEEc
Confidence 5 322111000001 00233368876644332000 012335788888764322211 222 123333
Q ss_pred -CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEE---EEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 016751 271 -DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKL---YTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 271 -~g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~---~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~ 345 (383)
+| .|+++..... .+.+|.++.. ....... ..+........-+++..+|.|++. ...++ .+..||++
T Consensus 158 pdg~~lyv~~~~~~----~i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva--~~~~~-~v~~~d~~ 228 (297)
T 3g4e_A 158 LDHKIFYYIDSLSY----SVDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA--CYNGG-RVIRLDPV 228 (297)
T ss_dssp TTSCEEEEEEGGGT----EEEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE--EETTT-EEEEECTT
T ss_pred CCCCEEEEecCCCC----cEEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE--EcCCC-EEEEEcCC
Confidence 34 4666665443 5555555411 1223221 222211102333455668899988 52344 49999999
Q ss_pred CCeE-EEEEEe
Q 016751 346 SDTF-KCIGVH 355 (383)
Q Consensus 346 t~~~-~~v~~~ 355 (383)
|+++ ..+...
T Consensus 229 tG~~~~~i~~p 239 (297)
T 3g4e_A 229 TGKRLQTVKLP 239 (297)
T ss_dssp TCCEEEEEECS
T ss_pred CceEEEEEECC
Confidence 7765 455443
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.45 Score=48.28 Aligned_cols=188 Identities=7% Similarity=0.053 Sum_probs=98.6
Q ss_pred CCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~ 209 (383)
.++.+.|||...++...+........ ...+.+.+. .+.-.++.......+.+|+..++.|.... ..........
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~-~~~~h~~~V~- 103 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP---KFGTILASCSYDGKVLIWKEENGRWSQIA-VHAVHSASVN- 103 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT---TSCSEEEEEETTSCEEEEEEETTEEEEEE-EECCCSSCEE-
T ss_pred CCCcEEEEecCCCCCccceeccCCcCceEEEEecCC---CCCCEEEEEeCCCeEEEEECCCCcccccc-cccCCCCCeE-
Confidence 46677777766433333322222222 245566544 32334444444678999999999886655 2221110001
Q ss_pred cccceeEE--C--ceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCCCCCCceEEEEe--------------
Q 016751 210 HINSSVFL--N--GSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-------------- 270 (383)
Q Consensus 210 ~~~~~v~~--~--G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~-------------- 270 (383)
++.+ + |.+...+..+ ..|..+|+.+..-. ...+. .... ....+.-.
T Consensus 104 ----~v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~~~~~~~~~~-~~~~--~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 104 ----SVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIID-AHAI--GVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp ----EEEECCGGGCSEEEEEETT--------SEEEEEECCSSSCCCCEEEE-CCSS--CEEEEEECCCC---------CG
T ss_pred ----EEEECCCCCCCEEEEEeCC--------CcEEEEEeecCCCcceeEee-cCCC--ceEEEEecCcccccccccccCC
Confidence 2222 2 5555544443 58999998766221 11111 1100 11122222
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeC---CcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTER---GKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+|.+.+++..+ ..+.+|.+... ...+.....+.........+.+..+ |.+++. ...++ .+.+||++++
T Consensus 169 d~~~l~sgs~d----g~I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s--~s~Dg-~I~iwd~~~~ 239 (753)
T 3jro_A 169 ESRKFVTGGAD----NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS--VSQDR-TCIIWTQDNE 239 (753)
T ss_dssp GGCCEEEEETT----SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EESSS-CEEEEEESSS
T ss_pred CCCEEEEEECC----CeEEEEeccCC--cccceeeeeecCCCCcEEEEEeccCCCCCCEEEE--EecCC-EEEEecCCCC
Confidence 35666666555 48999999863 2446666666533223455666666 777776 43455 4899998886
No 32
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.84 E-value=0.81 Score=39.64 Aligned_cols=192 Identities=10% Similarity=-0.031 Sum_probs=100.4
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCce
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W 193 (383)
+....+|.+.+... ....++++|| +++...+..+.......++.+|+. . ++..... ...+.+|+. +++.
T Consensus 104 i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~---g---~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM--NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD---N---ALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT---S---CEEEEETTTTEEEEECT-TCCE
T ss_pred eEECCCCCEEEEec--CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC---C---CEEEEeCCCCEEEEEcC-CCcE
Confidence 44455777766652 4568999999 766665433222222256666654 3 2222222 457888888 7776
Q ss_pred eeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
+.......... .. ++.+ +|.+|+..... ..|..||+ +.++..+.+| .... ....++..
T Consensus 174 ~~~~~~~~~~~----~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~~~ 234 (299)
T 2z2n_A 174 TEFKIPTPASG----PV---GITKGNDDALWFVEIIG--------NKIGRITT-SGEITEFKIP-TPNA--RPHAITAGA 234 (299)
T ss_dssp EEEECSSTTCC----EE---EEEECTTSSEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECS
T ss_pred EEeeCCCCCCc----ce---eEEECCCCCEEEEccCC--------ceEEEECC-CCcEEEEECC-CCCC--CceeEEECC
Confidence 65431111110 01 3333 58887655332 48999999 7777766555 3221 22344444
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
+|+|++..... ..+..+..+ ... ....++........+.+ .+|.+++. . ... .+..||+++++++
T Consensus 235 ~g~l~v~~~~~----~~i~~~d~~-----g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~--~-~~~-~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 235 GIDLWFTEWGA----NKIGRLTSN-----NII-EEYPIQIKSAEPHGICF-DGETIWFA--M-ECD-KIGKLTLIKDNME 299 (299)
T ss_dssp TTCEEEEETTT----TEEEEEETT-----TEE-EEEECSSSSCCEEEEEE-CSSCEEEE--E-TTT-EEEEEEEC-----
T ss_pred CCCEEEeccCC----ceEEEECCC-----Cce-EEEeCCCCCCccceEEe-cCCCEEEE--e-cCC-cEEEEEcCcccCC
Confidence 47887776433 245444331 111 12223311112344555 77889988 5 444 4999999988653
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.67 E-value=0.46 Score=40.88 Aligned_cols=114 Identities=13% Similarity=0.108 Sum_probs=72.7
Q ss_pred eEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEe
Q 016751 215 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 293 (383)
Q Consensus 215 v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l 293 (383)
.+.+|.||.-++.. ....|..+|+.+.+. ..+++| ... +..-++..+++|+++.-.++ .+|++
T Consensus 27 ~~~~~~LyestG~~------g~S~v~~vD~~tgkv~~~~~l~-~~~---fgeGi~~~~~~ly~ltw~~~------~v~v~ 90 (243)
T 3mbr_X 27 FYLRGHLYESTGET------GRSSVRKVDLETGRILQRAEVP-PPY---FGAGIVAWRDRLIQLTWRNH------EGFVY 90 (243)
T ss_dssp EEETTEEEEEECCT------TSCEEEEEETTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEESSSS------EEEEE
T ss_pred EEECCEEEEECCCC------CCceEEEEECCCCCEEEEEeCC-CCc---ceeEEEEeCCEEEEEEeeCC------EEEEE
Confidence 45667777765543 345899999998876 455777 433 33456777899999875443 45555
Q ss_pred ccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 016751 294 KEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 355 (383)
Q Consensus 294 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~~-~~v~~~ 355 (383)
+- ..-.++.+++.... ..++..++ .+|+. ++..++..+|++|.+. +.+...
T Consensus 91 D~----~tl~~~~ti~~~~~---Gwglt~dg~~L~vS----dgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 91 DL----ATLTPRARFRYPGE---GWALTSDDSHLYMS----DGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp ET----TTTEEEEEEECSSC---CCEEEECSSCEEEE----CSSSEEEEECTTTCCEEEEEECE
T ss_pred EC----CcCcEEEEEeCCCC---ceEEeeCCCEEEEE----CCCCeEEEEeCCCCeEEEEEEEc
Confidence 54 22567777776531 23444444 56666 3333699999999765 455543
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.21 E-value=0.31 Score=42.48 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=70.0
Q ss_pred eEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEe
Q 016751 215 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 293 (383)
Q Consensus 215 v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l 293 (383)
.+.+|.||.-++.. ....|..+|+.+.+. ..+++| ... +..-++..+++|+++.-.++ .+|++
T Consensus 49 ~~~~~~LyestG~~------g~S~v~~vD~~Tgkv~~~~~l~-~~~---FgeGit~~g~~ly~ltw~~~------~v~v~ 112 (262)
T 3nol_A 49 FYRNGYFYESTGLN------GRSSIRKVDIESGKTLQQIELG-KRY---FGEGISDWKDKIVGLTWKNG------LGFVW 112 (262)
T ss_dssp EEETTEEEEEEEET------TEEEEEEECTTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEESSSS------EEEEE
T ss_pred EEECCEEEEECCCC------CCceEEEEECCCCcEEEEEecC-Ccc---ceeEEEEeCCEEEEEEeeCC------EEEEE
Confidence 45588888876653 234899999998876 445776 432 23346777899999875543 45555
Q ss_pred ccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEE
Q 016751 294 KEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGV 354 (383)
Q Consensus 294 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~~-~~v~~ 354 (383)
+- ..-.++.+++... ...++..+| .+|+. ++...+..+|++|.+. ..+..
T Consensus 113 D~----~t~~~~~ti~~~~---eG~glt~dg~~L~~S----dGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 113 NI----RNLRQVRSFNYDG---EGWGLTHNDQYLIMS----DGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp ET----TTCCEEEEEECSS---CCCCEEECSSCEEEC----CSSSEEEEECTTTCSEEEEEEC
T ss_pred EC----ccCcEEEEEECCC---CceEEecCCCEEEEE----CCCCeEEEEcCCCCeEEEEEEe
Confidence 53 1245666777643 112344445 45554 4333699999999664 45554
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.07 E-value=1.9 Score=39.05 Aligned_cols=194 Identities=10% Similarity=-0.018 Sum_probs=102.0
Q ss_pred EEEccCce-EEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 115 VVGSCNGV-LCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gl-l~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
+.-+.+|- |++... .+..+.++|+.+++....-+... ....+.+.+. +.+-++.......+.+|+..+++-
T Consensus 37 ~~~s~dg~~l~~~~~--~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spd----g~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 37 AVISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPD----GKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp EEECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSS--SEEEEEECTT----SSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCCEEEEECC--CCCeEEEEECCCCeEEEEEECCC--CccceEECCC----CCEEEEEECCCCEEEEEECCCCeE
Confidence 44455553 444442 46789999999887655332222 2245666654 233323322246899999998755
Q ss_pred eeeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~- 270 (383)
...- ........ . .+.-+|. +|..+... ..|..+|+.+.+.... ... . ....+...
T Consensus 109 ~~~~-~~~~~~~~---~---~~s~dg~~l~~~~~~~--------~~v~~~d~~~~~~~~~~~~~-~-----~~~~~~~~~ 167 (391)
T 1l0q_A 109 AGTV-KTGKSPLG---L---ALSPDGKKLYVTNNGD--------KTVSVINTVTKAVINTVSVG-R-----SPKGIAVTP 167 (391)
T ss_dssp EEEE-ECSSSEEE---E---EECTTSSEEEEEETTT--------TEEEEEETTTTEEEEEEECC-S-----SEEEEEECT
T ss_pred EEEE-eCCCCcce---E---EECCCCCEEEEEeCCC--------CEEEEEECCCCcEEEEEecC-C-----CcceEEECC
Confidence 3322 11111110 0 2223565 44444333 5899999988766443 222 1 11223333
Q ss_pred CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEee--CCceEEEEEeCCCC
Q 016751 271 DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR--HGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ~g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~--~~~~~~~~yd~~t~ 347 (383)
+|+ |++....+ ..+.+|-+.. ......+.... ....+.+..+|..++.+ .. .++ .+.+||++++
T Consensus 168 dg~~l~~~~~~~----~~v~~~d~~~------~~~~~~~~~~~-~~~~~~~~~~g~~l~~~-~~~~~~~-~v~~~d~~~~ 234 (391)
T 1l0q_A 168 DGTKVYVANFDS----MSISVIDTVT------NSVIDTVKVEA-APSGIAVNPEGTKAYVT-NVDKYFN-TVSMIDTGTN 234 (391)
T ss_dssp TSSEEEEEETTT----TEEEEEETTT------TEEEEEEECSS-EEEEEEECTTSSEEEEE-EECSSCC-EEEEEETTTT
T ss_pred CCCEEEEEeCCC----CEEEEEECCC------CeEEEEEecCC-CccceEECCCCCEEEEE-ecCcCCC-cEEEEECCCC
Confidence 354 44444333 5888987764 23334444332 24445666677555541 21 233 5999999988
Q ss_pred eEE
Q 016751 348 TFK 350 (383)
Q Consensus 348 ~~~ 350 (383)
+..
T Consensus 235 ~~~ 237 (391)
T 1l0q_A 235 KIT 237 (391)
T ss_dssp EEE
T ss_pred eEE
Confidence 654
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.91 E-value=2.1 Score=38.72 Aligned_cols=188 Identities=7% Similarity=0.016 Sum_probs=102.1
Q ss_pred CCceEEEEccCccceeecCCCC-CCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPS-LNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~-~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~ 209 (383)
.++.+.|||..+++....-... .......+.+.|. . .-.++.......+.+|+.++...+... ...........
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~---~-~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~~ 168 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF---N-TNQLFVSSIRGATTLRDFSGSVIQVFA-KTDSWDYWYCC 168 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT---E-EEEEEEEETTTEEEEEETTSCEEEEEE-CCCCSSCCEEE
T ss_pred CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC---C-CCEEEEEeCCCEEEEEECCCCceEEEe-ccCCCCCCeEE
Confidence 4677889998887766543322 2222255666653 2 223333333678999999887666554 22110000000
Q ss_pred cccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeC-Ce-EEEEEecCCCCccE
Q 016751 210 HINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFD-GY-LCVFATIPNNTFRS 287 (383)
Q Consensus 210 ~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~-g~-L~~v~~~~~~~~~~ 287 (383)
- ...-+|.....+... ..|..+|+..+....+... .. ....+.-.. |. +.+....+ ..
T Consensus 169 ~---~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~h-~~----~v~~~~~~~~~~~~l~s~~~d----~~ 228 (383)
T 3ei3_B 169 V---DVSVSRQMLATGDST--------GRLLLLGLDGHEIFKEKLH-KA----KVTHAEFNPRCDWLMATSSVD----AT 228 (383)
T ss_dssp E---EEETTTTEEEEEETT--------SEEEEEETTSCEEEEEECS-SS----CEEEEEECSSCTTEEEEEETT----SE
T ss_pred E---EECCCCCEEEEECCC--------CCEEEEECCCCEEEEeccC-CC----cEEEEEECCCCCCEEEEEeCC----CE
Confidence 0 223345554444433 5899999976655555332 11 122333333 44 55555554 49
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 288 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
+.+|.+....... .....+.... ....+.+.. +|..++. ...++ .+.+||+++.+.
T Consensus 229 i~iwd~~~~~~~~--~~~~~~~~~~-~v~~~~~s~~~~~~l~~--~~~d~-~i~iwd~~~~~~ 285 (383)
T 3ei3_B 229 VKLWDLRNIKDKN--SYIAEMPHEK-PVNAAYFNPTDSTKLLT--TDQRN-EIRVYSSYDWSK 285 (383)
T ss_dssp EEEEEGGGCCSTT--CEEEEEECSS-CEEEEEECTTTSCEEEE--EESSS-EEEEEETTBTTS
T ss_pred EEEEeCCCCCccc--ceEEEecCCC-ceEEEEEcCCCCCEEEE--EcCCC-cEEEEECCCCcc
Confidence 9999998643222 2333333332 355566666 7777666 42455 499999988653
No 37
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.77 E-value=1.5 Score=39.77 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=72.3
Q ss_pred cCeEEEEEcCCC--ceeeeccCCCcee------eeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--ee
Q 016751 180 NADAEVYSLRSN--SWKNIAYGFPRSI------EINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IF 249 (383)
Q Consensus 180 ~~~~~vyss~t~--~W~~~~~~~p~~~------~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~ 249 (383)
...+..|+..++ .|+... ..+... ...... ++..+|.+|.....+ .+.++|..+. .|
T Consensus 197 ~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~---p~~~~~~v~~~~~~g---------~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTT---PVVVNGVVFALAYNG---------NLTALDLRSGQIMW 263 (376)
T ss_dssp TTEEEEEETTTCCEEEEEEC-CC-----------CCCCC---CEEETTEEEEECTTS---------CEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCC---cEEECCEEEEEecCc---------EEEEEECCCCcEEe
Confidence 346778887765 677544 222111 001122 677889998865443 7999998765 44
Q ss_pred eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEE
Q 016751 250 QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIR 329 (383)
Q Consensus 250 ~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~ 329 (383)
+. ..+ . ...+...+|.|++..... .+..+..+. .+..|... ...... ...++ + .++.||+.
T Consensus 264 ~~-~~~-~------~~~~~~~~~~l~~~~~~g-----~l~~~d~~t--G~~~w~~~-~~~~~~-~~~~~-~-~~~~l~v~ 324 (376)
T 3q7m_A 264 KR-ELG-S------VNDFIVDGNRIYLVDQND-----RVMALTIDG--GVTLWTQS-DLLHRL-LTSPV-L-YNGNLVVG 324 (376)
T ss_dssp EE-CCC-C------EEEEEEETTEEEEEETTC-----CEEEEETTT--CCEEEEEC-TTTTSC-CCCCE-E-ETTEEEEE
T ss_pred ec-cCC-C------CCCceEECCEEEEEcCCC-----eEEEEECCC--CcEEEeec-ccCCCc-ccCCE-E-ECCEEEEE
Confidence 43 222 1 233556677887766422 333332222 23445432 011111 12222 2 35678877
Q ss_pred EEeeCCceEEEEEeCCCCeEEE
Q 016751 330 GECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 330 ~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
. .++ .++++|++|++...
T Consensus 325 --~-~~g-~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 325 --D-SEG-YLHWINVEDGRFVA 342 (376)
T ss_dssp --C-TTS-EEEEEETTTCCEEE
T ss_pred --e-CCC-eEEEEECCCCcEEE
Confidence 5 555 49999999998653
No 38
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.61 E-value=2.2 Score=37.53 Aligned_cols=188 Identities=10% Similarity=-0.004 Sum_probs=86.3
Q ss_pred CCceEEEEccC-ccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcC--CCceeeeccCCCceeee
Q 016751 131 DRSLIYLWNPL-IKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLR--SNSWKNIAYGFPRSIEI 206 (383)
Q Consensus 131 ~~~~~~v~NP~-t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~--t~~W~~~~~~~p~~~~~ 206 (383)
..+.+.+++.. +++...+..........++.++|. +.+ ++.... ...+.+|+.. +++++.+. ..+....
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~-l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~- 85 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD----KRY-LYVGVRPEFRVLAYRIAPDDGALTFAA-ESALPGS- 85 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTT----SSE-EEEEETTTTEEEEEEECTTTCCEEEEE-EEECSSC-
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCC----CCE-EEEeecCCCeEEEEEecCCCCceeecc-ccccCCC-
Confidence 34566677652 333222211111111234666654 233 333332 3688998887 77887655 3221111
Q ss_pred ccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCC-eeeEe-CCCCCCCCCCCceEEEEe-CCe-EEEEEecC
Q 016751 207 NRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKE-IFQTV-MMPYDLSTDDADKYLNVF-DGY-LCVFATIP 281 (383)
Q Consensus 207 ~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~-~~~~i-~lP~~~~~~~~~~~l~~~-~g~-L~~v~~~~ 281 (383)
...- .+.-+|. +|...... ..|..||+.+. ....+ ..+ ... ....++.. +|+ |++.....
T Consensus 86 ~~~~---~~s~dg~~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~~~-~~~---~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 86 LTHI---STDHQGQFVFVGSYNA--------GNVSVTRLEDGLPVGVVDVVE-GLD---GCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp CSEE---EECTTSSEEEEEETTT--------TEEEEEEEETTEEEEEEEEEC-CCT---TBCCCEECTTSSEEEEEEGGG
T ss_pred CcEE---EEcCCCCEEEEEecCC--------CeEEEEECCCCcccccccccc-CCC---CceEEEECCCCCEEEEecCCC
Confidence 0100 2233565 44443322 47888888422 22222 112 111 11122222 344 54444233
Q ss_pred CCCccEEEEEEeccCCCCCCeEEEE--EecCCCc-eeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCC--CCeEE
Q 016751 282 NNTFRSYELWVMKEYGLTESWTKLY--TIEKPQR-IWWPLGFTERGK-IFIRGECRHGGYGLLVYNPH--SDTFK 350 (383)
Q Consensus 282 ~~~~~~l~iW~l~~~~~~~~W~~~~--~i~~~~~-~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~--t~~~~ 350 (383)
..+.+|.++.. ....... .+..... ....+.+..+|+ +++. ...+. .+..||++ +++++
T Consensus 151 ----~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~--~~~~~-~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 151 ----DRICLFTVSDD---GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV--NELNS-SVDVWELKDPHGNIE 215 (343)
T ss_dssp ----TEEEEEEECTT---SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE--ETTTT-EEEEEESSCTTSCCE
T ss_pred ----CEEEEEEecCC---CceeeecccccccCCCCCcceEEECCCCCEEEEE--eCCCC-EEEEEEecCCCCcEE
Confidence 48899988752 3344433 3332211 234456667776 5555 31334 48899884 45544
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.52 E-value=2.5 Score=37.75 Aligned_cols=204 Identities=11% Similarity=0.054 Sum_probs=98.8
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
-+.+|-+++... .++.+.++|..++++..+-...... ....+.+.+. + .+ ++.......+.+|+.+++.+..
T Consensus 16 ~s~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~-~~-l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 16 WNKDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD---S-NR-IVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp ECTTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT---T-TE-EEEEETTSCEEEEEEETTEEEE
T ss_pred ECCCCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC---C-CE-EEEEcCCCeEEEEECCCCeeee
Confidence 344554444432 5678889998887533222222111 2255666654 2 23 3333335689999998887764
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCe-e---eEeCCCCCCCCCCCceEEEEe-
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-F---QTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~-~---~~i~lP~~~~~~~~~~~l~~~- 270 (383)
........... ..- ...-+|.....+... ..|..+|+.+.. + ..+..+ ... ....+...
T Consensus 89 ~~~~~~~~~~v-~~~---~~~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~-~~~---~i~~~~~~~ 152 (372)
T 1k8k_C 89 TLVILRINRAA-RCV---RWAPNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKP-IRS---TVLSLDWHP 152 (372)
T ss_dssp EEECCCCSSCE-EEE---EECTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTT-CCS---CEEEEEECT
T ss_pred eEEeecCCCce-eEE---EECCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecc-cCC---CeeEEEEcC
Confidence 43111111000 000 112245554444433 357777776543 2 222222 111 12233333
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCC-----CCCC-------eEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYG-----LTES-------WTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYG 338 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~-----~~~~-------W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 338 (383)
+|.+.++...+ ..+.+|.+.... .... -..+..+.........+.+..+|..++. ...++ .
T Consensus 153 ~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~-~ 225 (372)
T 1k8k_C 153 NSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW--VSHDS-T 225 (372)
T ss_dssp TSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE--EETTT-E
T ss_pred CCCEEEEEcCC----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE--EeCCC-E
Confidence 45655555544 489999874211 0111 2233344322112445566667766665 42455 4
Q ss_pred EEEEeCCCCeEE
Q 016751 339 LLVYNPHSDTFK 350 (383)
Q Consensus 339 ~~~yd~~t~~~~ 350 (383)
+..||+++++..
T Consensus 226 i~i~d~~~~~~~ 237 (372)
T 1k8k_C 226 VCLADADKKMAV 237 (372)
T ss_dssp EEEEEGGGTTEE
T ss_pred EEEEECCCCcee
Confidence 999999877643
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.50 E-value=2.7 Score=38.05 Aligned_cols=187 Identities=11% Similarity=0.015 Sum_probs=98.3
Q ss_pred eEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCC
Q 016751 122 VLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFP 201 (383)
Q Consensus 122 ll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p 201 (383)
.+++... .++.+.++|..+++....-+... ....+.+.+. +.+-++.......+.+|+..+++-...- ..+
T Consensus 3 ~l~vs~~--~d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~d----g~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~ 73 (391)
T 1l0q_A 3 FAYIANS--ESDNISVIDVTSNKVTATIPVGS--NPMGAVISPD----GTKVYVANAHSNDVSIIDTATNNVIATV-PAG 73 (391)
T ss_dssp EEEEEET--TTTEEEEEETTTTEEEEEEECSS--SEEEEEECTT----SSEEEEEEGGGTEEEEEETTTTEEEEEE-ECS
T ss_pred EEEEEcC--CCCEEEEEECCCCeEEEEeecCC--CcceEEECCC----CCEEEEECCCCCeEEEEECCCCeEEEEE-ECC
Confidence 4444443 56788999998877654322211 1245566554 2333233223678999999887553322 122
Q ss_pred ceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-CCe-EEEE
Q 016751 202 RSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGY-LCVF 277 (383)
Q Consensus 202 ~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~g~-L~~v 277 (383)
...... .+.-+|. +|..+.. ...|..+|+.+.+.... ..+ . ....++.. +|+ |++.
T Consensus 74 ~~v~~~------~~spdg~~l~~~~~~--------~~~v~v~d~~~~~~~~~~~~~-~-----~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 74 SSPQGV------AVSPDGKQVYVTNMA--------SSTLSVIDTTSNTVAGTVKTG-K-----SPLGLALSPDGKKLYVT 133 (391)
T ss_dssp SSEEEE------EECTTSSEEEEEETT--------TTEEEEEETTTTEEEEEEECS-S-----SEEEEEECTTSSEEEEE
T ss_pred CCccce------EECCCCCEEEEEECC--------CCEEEEEECCCCeEEEEEeCC-C-----CcceEEECCCCCEEEEE
Confidence 111100 2222455 4444333 25899999998766433 322 1 11234433 355 4444
Q ss_pred EecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 278 ATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 278 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
. ... ..+.+|.++. .+. +..+.... ....+.+..+|. +++. ...++ .+..||+++++...
T Consensus 134 ~-~~~---~~v~~~d~~~----~~~--~~~~~~~~-~~~~~~~~~dg~~l~~~--~~~~~-~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 134 N-NGD---KTVSVINTVT----KAV--INTVSVGR-SPKGIAVTPDGTKVYVA--NFDSM-SISVIDTVTNSVID 194 (391)
T ss_dssp E-TTT---TEEEEEETTT----TEE--EEEEECCS-SEEEEEECTTSSEEEEE--ETTTT-EEEEEETTTTEEEE
T ss_pred e-CCC---CEEEEEECCC----CcE--EEEEecCC-CcceEEECCCCCEEEEE--eCCCC-EEEEEECCCCeEEE
Confidence 4 333 5899997764 222 23333322 244456666675 4455 32344 59999999987654
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.48 E-value=0.87 Score=42.46 Aligned_cols=187 Identities=12% Similarity=0.106 Sum_probs=94.1
Q ss_pred CCceEEEEccCccceeecCCC-CCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRP-SLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~-~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~ 209 (383)
.++.+.|||..+++...+-.. ........+.|.|. ..++ ++.......+.+++.+++.-+... ...........
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~---~~~~-l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~ 214 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL---NTNQ-FYASSMEGTTRLQDFKGNILRVFA-SSDTINIWFCS 214 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS---CTTE-EEEECSSSCEEEEETTSCEEEEEE-CCSSCSCCCCC
T ss_pred CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC---CCCE-EEEEeCCCEEEEeeccCCceeEEe-ccCCCCccEEE
Confidence 678899999988765443222 22222366777765 3333 333333567889998877655444 21111110110
Q ss_pred cccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCe-EEEEEecCCCCccE
Q 016751 210 HINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRS 287 (383)
Q Consensus 210 ~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~~~ 287 (383)
. .+.-+|.+...+... ..|..+|+..+....+... . . ....+... .|. +++.+..+ ..
T Consensus 215 ~---~~~~~~~~l~~g~~d--------g~i~~wd~~~~~~~~~~~h---~-~-~v~~v~~~p~~~~~~~s~s~d----~~ 274 (435)
T 4e54_B 215 L---DVSASSRMVVTGDNV--------GNVILLNMDGKELWNLRMH---K-K-KVTHVALNPCCDWFLATASVD----QT 274 (435)
T ss_dssp E---EEETTTTEEEEECSS--------SBEEEEESSSCBCCCSBCC---S-S-CEEEEEECTTCSSEEEEEETT----SB
T ss_pred E---EECCCCCEEEEEeCC--------CcEeeeccCcceeEEEecc---c-c-eEEeeeecCCCceEEEEecCc----ce
Confidence 0 223356655554443 5788899876543322211 1 0 11223322 344 44444444 48
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 288 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+.||-+.......... ....... ....+++..+|..++. ...++ .+.+||.++.+
T Consensus 275 v~iwd~~~~~~~~~~~--~~~~h~~-~v~~~~~spdg~~l~s--~~~D~-~i~iwd~~~~~ 329 (435)
T 4e54_B 275 VKIWDLRQVRGKASFL--YSLPHRH-PVNAACFSPDGARLLT--TDQKS-EIRVYSASQWD 329 (435)
T ss_dssp CCEEETTTCCSSSCCS--BCCBCSS-CEEECCBCTTSSEEEE--EESSS-CEEEEESSSSS
T ss_pred eeEEecccccccceEE--Eeeeccc-cccceeECCCCCeeEE--EcCCC-EEEEEECCCCc
Confidence 9999886532111110 0011111 2333445567766666 42455 38899988765
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.45 E-value=2.6 Score=37.66 Aligned_cols=206 Identities=7% Similarity=0.119 Sum_probs=99.6
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce-eeecc
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW-KNIAY 198 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W-~~~~~ 198 (383)
|-+++... .++.+.+||..++++..+-...... ....+.+.+. ...-.++.......+.+|+..++.- .....
T Consensus 69 ~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 69 GTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH---EYGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp CSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG---GGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred CCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCC---CCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 44444432 5778999999888644433322222 2255666654 3133344444467889999987632 21110
Q ss_pred -CCCceee---eccCcc----cceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe-CCCCCCCCCCCceEE
Q 016751 199 -GFPRSIE---INRSHI----NSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDLSTDDADKYL 267 (383)
Q Consensus 199 -~~p~~~~---~~~~~~----~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i-~lP~~~~~~~~~~~l 267 (383)
....... +..... .....-+|.+...+... ..|..||+.+. .+..+ .+. .+.. ....+
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~-~h~~--~v~~~ 212 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLESTLE-GHSD--WVRDV 212 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETT--------SCEEEEEEETTTTEEEEEEEEC-CCSS--CEEEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC--------CeEEEEEecCCCcceeeEEEEe-cccC--cEeEE
Confidence 1111111 100000 00000045555544433 46888887644 34333 232 2111 12233
Q ss_pred EEeC----CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc--eeEEEEEeeCCcEEEEEEeeCCceEEEE
Q 016751 268 NVFD----GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR--IWWPLGFTERGKIFIRGECRHGGYGLLV 341 (383)
Q Consensus 268 ~~~~----g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~ 341 (383)
.-.. |.+.+....+ ..+.+|.++... ..+... ....... ....+.+..+|..++. ...++. +.+
T Consensus 213 ~~sp~~~~~~~l~s~~~d----g~i~iwd~~~~~--~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~-i~i 282 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQD----RTCIIWTQDNEQ--GPWKKT-LLKEEKFPDVLWRASWSLSGNVLAL--SGGDNK-VTL 282 (379)
T ss_dssp EECCCCSSSEEEEEEETT----SCEEEEEESSTT--SCCEEE-ESSSSCCSSCEEEEEECSSSCCEEE--EESSSS-EEE
T ss_pred EECCCCCCCCeEEEEeCC----CEEEEEeCCCCC--ccceee-eeccccCCCcEEEEEEcCCCCEEEE--ecCCCc-EEE
Confidence 3332 5565555555 489999998632 223322 2221111 3445566677765555 324553 899
Q ss_pred EeCCC-CeEEEE
Q 016751 342 YNPHS-DTFKCI 352 (383)
Q Consensus 342 yd~~t-~~~~~v 352 (383)
||+++ ++|+.+
T Consensus 283 w~~~~~~~~~~~ 294 (379)
T 3jrp_A 283 WKENLEGKWEPA 294 (379)
T ss_dssp EEEEETTEEEEE
T ss_pred EeCCCCCccccc
Confidence 99884 556655
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.40 E-value=3 Score=38.29 Aligned_cols=199 Identities=14% Similarity=0.050 Sum_probs=104.4
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
.+.+|-+++... .++.+.++|+.+++... ++... .....+.+++. . .+-++.......+.+|+.++++...
T Consensus 177 ~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~---~-~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 177 IPEHNELWVSQM--QANAVHVFDLKTLAYKATVDLTG--KWSKILLYDPI---R-DLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EGGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECSS--SSEEEEEEETT---T-TEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EcCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCCC--CCeeEEEEcCC---C-CEEEEEecCCCcEEEEECCCCcEEE
Confidence 356677666653 56789999998865443 33111 11245666664 2 3322222125689999998876533
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCC--CCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-C
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDN--SCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-D 271 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~--~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~ 271 (383)
.- ......... .+.-+|...+.+... .+. .....|..||+.+.+.... ..+ .. ...++.. +
T Consensus 249 ~~-~~~~~~~~~------~~~~~g~~l~~~~~~--~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~~-----~~~~~~~~~ 313 (433)
T 3bws_A 249 KT-DKIGLPRGL------LLSKDGKELYIAQFS--ASNQESGGGRLGIYSMDKEKLIDTIGPP-GN-----KRHIVSGNT 313 (433)
T ss_dssp EC-CCCSEEEEE------EECTTSSEEEEEEEE--SCTTCSCCEEEEEEETTTTEEEEEEEEE-EC-----EEEEEECSS
T ss_pred Ee-cCCCCceEE------EEcCCCCEEEEEECC--CCccccCCCeEEEEECCCCcEEeeccCC-CC-----cceEEECCC
Confidence 22 121111100 222356555555432 000 0235899999987765333 222 11 1123322 3
Q ss_pred C-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeC--------------Cc
Q 016751 272 G-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH--------------GG 336 (383)
Q Consensus 272 g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~--------------~~ 336 (383)
| .|++....+ ..+.+|.++. ...+..++... ....+++..+|..++.+ ... ++
T Consensus 314 g~~l~~~~~~~----~~v~v~d~~~------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 314 ENKIYVSDMCC----SKIEVYDLKE------KKVQKSIPVFD-KPNTIALSPDGKYLYVS-CRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp TTEEEEEETTT----TEEEEEETTT------TEEEEEEECSS-SEEEEEECTTSSEEEEE-ECCCCCTTTCTTSCCSSCC
T ss_pred CCEEEEEecCC----CEEEEEECCC------CcEEEEecCCC-CCCeEEEcCCCCEEEEE-ecCCCccccccccccccce
Confidence 4 455554444 5899998874 23334444332 24456666777644441 211 23
Q ss_pred eEEEEEeCCCCeEEE
Q 016751 337 YGLLVYNPHSDTFKC 351 (383)
Q Consensus 337 ~~~~~yd~~t~~~~~ 351 (383)
.+..+|+++++...
T Consensus 382 -~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 382 -KVYVIDTTTDTVKE 395 (433)
T ss_dssp -EEEEEETTTTEEEE
T ss_pred -EEEEEECCCCcEEE
Confidence 49999999987654
No 44
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.30 E-value=2.7 Score=37.25 Aligned_cols=199 Identities=9% Similarity=-0.016 Sum_probs=99.8
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCC------C-ceeEEEeccCCCCCCeEEEEEEe-cCeEEEEE
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNP------R-YLGFGVNSVSGHLDDFKVVTISV-NADAEVYS 187 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~------~-~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vys 187 (383)
...+..+++... ....+.++|+.+++... ++...... . ..++.+++. + ++-++.-.. ...+.+|+
T Consensus 97 s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---g-~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 97 NNTTQTLWFGNT--VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA---T-NTVYISGIGKESVIWVVD 170 (353)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT---T-TEEEEEEESSSCEEEEEE
T ss_pred CCCCCEEEEEec--CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC---C-CEEEEEecCCCceEEEEc
Confidence 334444655553 46789999999987533 33321110 1 145677765 3 332332211 45788999
Q ss_pred cCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceE
Q 016751 188 LRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKY 266 (383)
Q Consensus 188 s~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~ 266 (383)
.++++=...- .. .... .... .+.-+|...+..... ..|..+|+.+.+... +..+ ..........
T Consensus 171 ~~~~~~~~~~-~~-~~~~-~~~~---~~s~dg~~l~~~~~~--------~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 235 (353)
T 3vgz_A 171 GGNIKLKTAI-QN-TGKM-STGL---ALDSEGKRLYTTNAD--------GELITIDTADNKILSRKKLL-DDGKEHFFIN 235 (353)
T ss_dssp TTTTEEEEEE-CC-CCTT-CCCC---EEETTTTEEEEECTT--------SEEEEEETTTTEEEEEEECC-CSSSCCCEEE
T ss_pred CCCCceEEEe-cC-CCCc-cceE---EECCCCCEEEEEcCC--------CeEEEEECCCCeEEEEEEcC-CCCCCcccce
Confidence 8876432111 10 0000 0100 233356543333322 488999998876643 3443 2111111222
Q ss_pred EEEe-CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEe
Q 016751 267 LNVF-DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 267 l~~~-~g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd 343 (383)
++.. +| .|++..... ..+.+|-++. .+- +..++... ...+.+..+|+ +|+. ...++ .+.++|
T Consensus 236 ~~~s~dg~~l~~~~~~~----~~v~~~d~~~----~~~--~~~~~~~~--~~~~~~s~dg~~l~v~--~~~~~-~v~~~d 300 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKA----AEVLVVDTRN----GNI--LAKVAAPE--SLAVLFNPARNEAYVT--HRQAG-KVSVID 300 (353)
T ss_dssp EEEETTTTEEEEEESSS----SEEEEEETTT----CCE--EEEEECSS--CCCEEEETTTTEEEEE--ETTTT-EEEEEE
T ss_pred EEECCCCCEEEEEeCCC----CEEEEEECCC----CcE--EEEEEcCC--CceEEECCCCCEEEEE--ECCCC-eEEEEE
Confidence 4433 34 465554332 4777776653 222 33333322 12255666776 6665 42344 599999
Q ss_pred CCCCeEEE
Q 016751 344 PHSDTFKC 351 (383)
Q Consensus 344 ~~t~~~~~ 351 (383)
.++++...
T Consensus 301 ~~~~~~~~ 308 (353)
T 3vgz_A 301 AKSYKVVK 308 (353)
T ss_dssp TTTTEEEE
T ss_pred CCCCeEEE
Confidence 99987654
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.20 E-value=3.1 Score=37.65 Aligned_cols=110 Identities=13% Similarity=-0.007 Sum_probs=57.5
Q ss_pred cCceEEEeecCCCCceEEEEccCccceee---cCCCCCCC--CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC--
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT---LPRPSLNP--RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN-- 191 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~---LP~~~~~~--~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~-- 191 (383)
.+|.|.+.. ....++.+|+.|++.+. ++...... ....+...+. ..+=+|+.......+..++.+++
T Consensus 52 ~~~~v~~~~---~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 52 ADNVVYAAD---RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT---VSGGHVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp ETTEEEEEC---TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE---EETTEEEEEETTSEEEEEETTTCCE
T ss_pred ECCEEEEEc---CCCeEEEEEccCCceeeeecCccccccccccCcccccCce---EeCCEEEEEcCCCEEEEEECCCCCE
Confidence 467776665 45688889998877542 22111000 0001111111 11112333332457888998776
Q ss_pred ceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe
Q 016751 192 SWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV 252 (383)
Q Consensus 192 ~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i 252 (383)
.|+.-. .-.. ... ++..+|.+|..... ..+.+||..+. .|+.-
T Consensus 126 ~W~~~~-~~~~-----~~~---p~~~~~~v~v~~~~---------g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 126 AWQTKV-AGEA-----LSR---PVVSDGLVLIHTSN---------GQLQALNEADGAVKWTVN 170 (376)
T ss_dssp EEEEEC-SSCC-----CSC---CEEETTEEEEECTT---------SEEEEEETTTCCEEEEEE
T ss_pred EEEEeC-CCce-----EcC---CEEECCEEEEEcCC---------CeEEEEECCCCcEEEEEe
Confidence 586543 2111 111 57778888875543 38999998655 46543
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.98 E-value=0.92 Score=40.99 Aligned_cols=197 Identities=15% Similarity=0.079 Sum_probs=90.7
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc-eeeec
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-WKNIA 197 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-W~~~~ 197 (383)
+|-+++... .++.+.|||..++++..+-....... ...+.+.+. + ++ ++.......+.+|+..++. |+...
T Consensus 22 ~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~-~~-l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 22 QRTEFVTTT--ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK---S-NR-IVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSSEEECCC--SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT---T-CC-EEEEETTSSEEEC------CCCCEE
T ss_pred CCCEEEEec--CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC---C-CE-EEEEeCCCeEEEEEcCCCCceeeee
Confidence 444443332 46678888888876555444433322 255666654 2 22 3333335689999998876 65443
Q ss_pred cCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCe----eeEeCCCCCCCCCCCceEEEEe-
Q 016751 198 YGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI----FQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~----~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
.......... ++. -+|.....+... ..|..+|+.+.. ...+.-| ... ....+.-.
T Consensus 95 -~~~~~~~~v~-----~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~-h~~---~v~~~~~~~ 156 (377)
T 3dwl_C 95 -VLLRLNRAAT-----FVRWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRP-LRS---TILSLDWHP 156 (377)
T ss_dssp -ECCCCSSCEE-----EEECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSS-CCS---CEEEEEECT
T ss_pred -EecccCCceE-----EEEECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecc-cCC---CeEEEEEcC
Confidence 1111000000 121 145444333332 468888887765 2333332 111 12233333
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCC-----CCCCe-------EEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYG-----LTESW-------TKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYG 338 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~-----~~~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 338 (383)
+|++.+....+ ..+.+|.++... ....| ..+..+.... ....+.+..+|..++. ...++ .
T Consensus 157 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~--~~~d~-~ 228 (377)
T 3dwl_C 157 NNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGG-WVHAVGFSPSGNALAY--AGHDS-S 228 (377)
T ss_dssp TSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSS-SEEEEEECTTSSCEEE--EETTT-E
T ss_pred CCCEEEEEeCC----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCc-eEEEEEECCCCCEEEE--EeCCC-c
Confidence 35655555544 489999985321 11112 2222331111 3455666677766555 32455 4
Q ss_pred EEEEeCCCCeE
Q 016751 339 LLVYNPHSDTF 349 (383)
Q Consensus 339 ~~~yd~~t~~~ 349 (383)
+..||+++++.
T Consensus 229 i~iwd~~~~~~ 239 (377)
T 3dwl_C 229 VTIAYPSAPEQ 239 (377)
T ss_dssp EC-CEECSTTS
T ss_pred EEEEECCCCCC
Confidence 88999888753
No 47
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.65 E-value=1 Score=39.21 Aligned_cols=110 Identities=13% Similarity=0.013 Sum_probs=67.9
Q ss_pred eEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEe
Q 016751 215 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 293 (383)
Q Consensus 215 v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l 293 (383)
.+.+|.||.-++.. ..|..+|+.+.+. ..+ +| ... +..-++..+++|+++.-.++ .+|++
T Consensus 61 ~~~~~~Ly~stG~~--------g~v~~iD~~Tgkv~~~~-l~-~~~---FgeGit~~g~~Ly~ltw~~~------~v~V~ 121 (268)
T 3nok_A 61 VFHQGHFFESTGHQ--------GTLRQLSLESAQPVWME-RL-GNI---FAEGLASDGERLYQLTWTEG------LLFTW 121 (268)
T ss_dssp EEETTEEEEEETTT--------TEEEECCSSCSSCSEEE-EC-TTC---CEEEEEECSSCEEEEESSSC------EEEEE
T ss_pred EEECCEEEEEcCCC--------CEEEEEECCCCcEEeEE-CC-CCc---ceeEEEEeCCEEEEEEccCC------EEEEE
Confidence 34567777766654 4599999998866 445 66 432 22346777899999865443 45566
Q ss_pred ccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEE
Q 016751 294 KEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGV 354 (383)
Q Consensus 294 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~~-~~v~~ 354 (383)
+- ..-.++.+++.... ..+++.+| .+|+. ++...+..+|++|.+. +.+..
T Consensus 122 D~----~Tl~~~~ti~~~~e---GwGLt~Dg~~L~vS----dGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 122 SG----MPPQRERTTRYSGE---GWGLCYWNGKLVRS----DGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ET----TTTEEEEEEECSSC---CCCEEEETTEEEEE----CSSSEEEEECTTTCCEEEEEEC
T ss_pred EC----CcCcEEEEEeCCCc---eeEEecCCCEEEEE----CCCCEEEEEcCCCCeEEEEEEe
Confidence 54 22466677776531 12333344 55555 3333699999999765 45554
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.53 E-value=3.6 Score=36.11 Aligned_cols=193 Identities=11% Similarity=0.072 Sum_probs=100.9
Q ss_pred cCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCce--ee
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSW--KN 195 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W--~~ 195 (383)
..+.+++... ....+.++|+.+++....-+.+.. . .++.+++. + .+ ++.... ...+.+|+..++.- +.
T Consensus 8 ~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~-~~~~~s~d---g-~~-l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 8 TSNFGIVVEQ--HLRRISFFSTDTLEILNQITLGYD-F-VDTAITSD---C-SN-VVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp CCCEEEEEEG--GGTEEEEEETTTCCEEEEEECCCC-E-EEEEECSS---S-CE-EEEEESTTCEEEEEECSSSSCEEEE
T ss_pred CCCEEEEEec--CCCeEEEEeCcccceeeeEEccCC-c-ceEEEcCC---C-CE-EEEEeCCCCeEEEEECCCCceeEEe
Confidence 3455555553 567899999999887554332211 1 25666664 3 33 333332 55889999988764 22
Q ss_pred ecc-CCCce-eeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-C
Q 016751 196 IAY-GFPRS-IEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-D 271 (383)
Q Consensus 196 ~~~-~~p~~-~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~ 271 (383)
... ..|.. . .+.-+|...+..... .....|..+|+.+.+.... +.+ . ....++.. +
T Consensus 79 ~~~~~~~~~~~---------~~s~dg~~l~~~~~~-----~~~~~i~v~d~~~~~~~~~~~~~-~-----~~~~~~~spd 138 (331)
T 3u4y_A 79 IQEGQSSMADV---------DITPDDQFAVTVTGL-----NHPFNMQSYSFLKNKFISTIPIP-Y-----DAVGIAISPN 138 (331)
T ss_dssp EEECSSCCCCE---------EECTTSSEEEECCCS-----SSSCEEEEEETTTTEEEEEEECC-T-----TEEEEEECTT
T ss_pred cccCCCCccce---------EECCCCCEEEEecCC-----CCcccEEEEECCCCCeEEEEECC-C-----CccceEECCC
Confidence 220 11111 1 223345533332221 1122899999988765432 332 1 11234443 3
Q ss_pred Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEE-EEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCe
Q 016751 272 GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTK-LYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 272 g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
|+ |++...... ..+.+|.++..+ ..... ...+.... ....+.+..+|+ +++. ...+. .+.+||+++++
T Consensus 139 g~~l~~~~~~~~---~~i~~~~~~~~g--~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~--~~~~~-~v~v~d~~~~~ 209 (331)
T 3u4y_A 139 GNGLILIDRSSA---NTVRRFKIDADG--VLFDTGQEFISGGT-RPFNITFTPDGNFAFVA--NLIGN-SIGILETQNPE 209 (331)
T ss_dssp SSCEEEEEETTT---TEEEEEEECTTC--CEEEEEEEEECSSS-SEEEEEECTTSSEEEEE--ETTTT-EEEEEECSSTT
T ss_pred CCEEEEEecCCC---ceEEEEEECCCC--cEeecCCccccCCC-CccceEECCCCCEEEEE--eCCCC-eEEEEECCCCc
Confidence 54 666665543 339999998532 11111 12222221 244456667786 6666 42344 59999999877
Q ss_pred E
Q 016751 349 F 349 (383)
Q Consensus 349 ~ 349 (383)
.
T Consensus 210 ~ 210 (331)
T 3u4y_A 210 N 210 (331)
T ss_dssp S
T ss_pred c
Confidence 4
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.52 E-value=3.9 Score=36.44 Aligned_cols=211 Identities=8% Similarity=-0.041 Sum_probs=106.7
Q ss_pred eEEEccCceEEEeecCCCCceEEEEccCcccee-ecCCCCCC--C-CceeEEEeccCCCCCCeEEEEEEe--cCeEEEEE
Q 016751 114 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYM-TLPRPSLN--P-RYLGFGVNSVSGHLDDFKVVTISV--NADAEVYS 187 (383)
Q Consensus 114 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~-~LP~~~~~--~-~~~~~g~d~~~~~~~~ykVv~~~~--~~~~~vys 187 (383)
.+..+.+|.+.+... ....+.++|+.|++.. .++..... . ...++.++ .+ +++.... ...+.+++
T Consensus 88 ~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~-----~~--~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY-----GK--YVYVNCWSYQNRILKID 158 (328)
T ss_dssp EEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE-----TT--EEEEEECTTCCEEEEEE
T ss_pred EEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE-----CC--EEEEEcCCCCCEEEEEE
Confidence 344456787766663 4678999999998754 34332200 0 11233332 22 2222221 45789999
Q ss_pred cCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCC--CCCCCcEEEEEECCCCeee-EeCCCCCCCCCCCc
Q 016751 188 LRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYH--DNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDAD 264 (383)
Q Consensus 188 s~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~--~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~ 264 (383)
..+++....- ...... .. - .+.-+|.+|......... .......|..+|+.+.+.. .+.+| ... ..
T Consensus 159 ~~t~~~~~~i-~~g~~p--~~-i---~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~---~p 227 (328)
T 3dsm_A 159 TETDKVVDEL-TIGIQP--TS-L---VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGD---WP 227 (328)
T ss_dssp TTTTEEEEEE-ECSSCB--CC-C---EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTC---CC
T ss_pred CCCCeEEEEE-EcCCCc--cc-e---EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-CCC---Cc
Confidence 9988653222 111111 00 0 233368877765432000 0001258999999988775 45666 332 22
Q ss_pred eEEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEe----eCCce
Q 016751 265 KYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGEC----RHGGY 337 (383)
Q Consensus 265 ~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~----~~~~~ 337 (383)
..++.. ++.|+++. . .||+++-.. .+......++.......-+++.. +|.||+. . ...+
T Consensus 228 ~~la~~~d~~~lyv~~-------~--~v~~~d~~t--~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva--~~~~y~~~~- 293 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWIN-------N--DIWRMPVEA--DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA--DAIDYQQQG- 293 (328)
T ss_dssp EEEEECTTSCEEEEES-------S--SEEEEETTC--SSCCSSCSBCCCSSCEEEEEECTTTCCEEEE--ECTTSSSEE-
T ss_pred eeEEEecCCCEEEEEc-------c--EEEEEECCC--CceeeeeeecCCCCceEEEEEcCCCCeEEEE--cccccccCC-
Confidence 345555 34566542 1 455555321 11111001111010133355553 6788888 3 2233
Q ss_pred EEEEEeCCCCeEEEEEEecCc
Q 016751 338 GLLVYNPHSDTFKCIGVHLPY 358 (383)
Q Consensus 338 ~~~~yd~~t~~~~~v~~~~~~ 358 (383)
.+.+||++.+..+.+.....|
T Consensus 294 ~V~v~d~~g~~~~~i~~G~~P 314 (328)
T 3dsm_A 294 IVYRYSPQGKLIDEFYVGIIP 314 (328)
T ss_dssp EEEEECTTCCEEEEEEEEESE
T ss_pred EEEEECCCCCEEEEEEeccCc
Confidence 599999996666777765443
No 50
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.30 E-value=7.7 Score=39.20 Aligned_cols=187 Identities=13% Similarity=0.095 Sum_probs=100.2
Q ss_pred CceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCc-eeeeccC
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPR-SIEINRS 209 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~-~~~~~~~ 209 (383)
...++++||.++++..++...... ....+..|+. + + +.+.....+..|+..++.|+... ..+. ......-
T Consensus 426 ~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~---g---~-lwigt~~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~i 497 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN---K---K-IWIGTHAGVFVIDLASKKVIHHY-DTSNSQLLENFV 497 (781)
T ss_dssp TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT---S---E-EEEEETTEEEEEESSSSSCCEEE-CTTTSSCSCSCE
T ss_pred cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC---C---C-EEEEECCceEEEeCCCCeEEecc-cCccccccccee
Confidence 356888899988888776431111 1244444432 1 1 22222467889999999887765 2220 0000000
Q ss_pred cccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCcc
Q 016751 210 HINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFR 286 (383)
Q Consensus 210 ~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~ 286 (383)
. +++. +|.+ |++... ..+..||..++++..+..+ ..........+.+. +|.|.+.+. .+
T Consensus 498 ~---~i~~d~~g~l-Wigt~~--------~Gl~~~~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~lWi~T~-~G---- 559 (781)
T 3v9f_A 498 R---SIAQDSEGRF-WIGTFG--------GGVGIYTPDMQLVRKFNQY-EGFCSNTINQIYRSSKGQMWLATG-EG---- 559 (781)
T ss_dssp E---EEEECTTCCE-EEEESS--------SCEEEECTTCCEEEEECTT-TTCSCSCEEEEEECTTSCEEEEET-TE----
T ss_pred E---EEEEcCCCCE-EEEEcC--------CCEEEEeCCCCeEEEccCC-CCCCCCeeEEEEECCCCCEEEEEC-CC----
Confidence 0 2322 4665 556542 2689999999999887544 44332233345553 477777653 21
Q ss_pred EEEEEEeccCCCCCCeEEEEEec-CCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEEE
Q 016751 287 SYELWVMKEYGLTESWTKLYTIE-KPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 287 ~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v~ 353 (383)
+ +..++. .+..+.....-. +....+..+....+|.|++. . ..+ +..||+++++++...
T Consensus 560 -l-v~~~d~--~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~--t-~~G--l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 560 -L-VCFPSA--RNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS--T-NTG--ISCYITSKKCFYTYD 618 (781)
T ss_dssp -E-EEESCT--TTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE--C-SSC--EEEEETTTTEEEEEC
T ss_pred -c-eEEECC--CCCcEEEccccCCCCCceEEEEEECCCCCEEEE--c-CCc--eEEEECCCCceEEec
Confidence 2 122222 123333321111 11101333444567889998 5 444 999999999887764
No 51
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.22 E-value=3.5 Score=36.32 Aligned_cols=201 Identities=8% Similarity=0.063 Sum_probs=93.8
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
..+.+|-.+.... .++.+.|||..+++...+-....... ...+.+.+. ...-.++.......+.+++.+++.|+
T Consensus 20 ~~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~---~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 20 QMDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP---MYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp EECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG---GGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred eEcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC---CCCCEEEEEECCCEEEEEECCCCcce
Confidence 3345565555543 57788888887765332222211111 244555332 11122333333668899999988886
Q ss_pred eeccCCCceeeeccCcccceeEE--C--ceEEEEEeeccCCCCCCCcEEEEEECCCC-eeeEe-CCCCCCCCCCCceEEE
Q 016751 195 NIAYGFPRSIEINRSHINSSVFL--N--GSVHWCARFSCYHDNSCPWLIVSFDFAKE-IFQTV-MMPYDLSTDDADKYLN 268 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~--~--G~lYw~~~~~~~~~~~~~~~il~fD~~~~-~~~~i-~lP~~~~~~~~~~~l~ 268 (383)
... .+........ ++.+ + |.+...+..+ ..|..+|+.++ .|... .+. .+..........
T Consensus 95 ~~~-~~~~h~~~V~-----~v~~~p~~~g~~lasgs~D--------~~i~lwd~~~~~~~~~~~~~~-~h~~~v~~~~~~ 159 (316)
T 3bg1_A 95 KSH-EHAGHDSSVN-----SVCWAPHDYGLILACGSSD--------GAISLLTYTGEGQWEVKKINN-AHTIGCNAVSWA 159 (316)
T ss_dssp EEE-EECCCSSCCC-----EEEECCTTTCSCEEEECSS--------SCEEEEEECSSSCEEECCBTT-SSSSCBCCCEEC
T ss_pred EEE-EccCCCCceE-----EEEECCCCCCcEEEEEcCC--------CCEEEEecCCCCCcceeeeec-cccCCcceEEEc
Confidence 543 2111000000 2222 2 4333333322 46777887765 45332 111 111000000000
Q ss_pred ----------Ee------CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC----cEEE
Q 016751 269 ----------VF------DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG----KIFI 328 (383)
Q Consensus 269 ----------~~------~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g----~i~~ 328 (383)
.. .+++.+.+..+ ..+.+|.++. ...|.....+.........+++..++ .+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D----~~v~lWd~~~---~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCD----NLIKLWKEEE---DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTT----SBCCEEEECT---TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred cccCCccccccccccCccccceEEEecCC----CeEEEEEeCC---CCccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 00 12333333333 5899999864 24577666554322134445554443 4555
Q ss_pred EEEeeCCceEEEEEeCCC
Q 016751 329 RGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 329 ~~~~~~~~~~~~~yd~~t 346 (383)
. ...++ .+..+|+++
T Consensus 233 s--~s~D~-~v~iw~~~~ 247 (316)
T 3bg1_A 233 S--CSQDG-RVFIWTCDD 247 (316)
T ss_dssp E--EETTC-EEEEEECSS
T ss_pred E--EcCCC-eEEEEEccC
Confidence 5 32455 488898876
No 52
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.13 E-value=4.7 Score=36.25 Aligned_cols=198 Identities=11% Similarity=-0.010 Sum_probs=98.1
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCC---CCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRP---SLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~---~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
-+.++.++... .++.+.|||..+++....... .+......+.+.+. + . .++.......+.+++.+++.=
T Consensus 90 ~s~d~~l~~~s---~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd---g-~-~l~sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 90 WVGERGILVAS---DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS---G-T-QAVSGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp EETTTEEEEEE---TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT---S-S-EEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCeEEEEE---CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC---C-C-EEEEEeCCCeEEEEECCCCcE
Confidence 34556666554 578899999988765433221 11112245566554 2 2 333333366789999887643
Q ss_pred eeeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~- 270 (383)
...-.......... ...-+|. +...+..+ ..|..+|+.+.+-. .+..+ ... .....+...
T Consensus 162 ~~~~~~h~~~V~~~------~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~-~~~--~~~~~~~~~p 224 (344)
T 4gqb_B 162 LSSYRAHAAQVTCV------AASPHKDSVFLSCSED--------NRILLWDTRCPKPASQIGCS-APG--YLPTSLAWHP 224 (344)
T ss_dssp EEEECCCSSCEEEE------EECSSCTTEEEEEETT--------SCEEEEETTSSSCEEECC-----C--CCEEEEEECS
T ss_pred EEEEcCcCCceEEE------EecCCCCCceeeeccc--------cccccccccccceeeeeecc-eee--ccceeeeecC
Confidence 21110111111000 1122342 33333322 47888999876543 33322 111 011223332
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
++++.+.+..+ ..+.+|-++.. ..+..+.........+++..+| .++.. ...++ .+.++|.++++
T Consensus 225 ~~~~~l~sg~~d----g~v~~wd~~~~------~~~~~~~~h~~~v~~v~fsp~g~~~las--gs~D~-~i~vwd~~~~~ 291 (344)
T 4gqb_B 225 QQSEVFVFGDEN----GTVSLVDTKST------SCVLSSAVHSQCVTGLVFSPHSVPFLAS--LSEDC-SLAVLDSSLSE 291 (344)
T ss_dssp SCTTEEEEEETT----SEEEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEE--EETTS-CEEEECTTCCE
T ss_pred CCCcceEEeccC----CcEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCeEEEE--EeCCC-eEEEEECCCCc
Confidence 35566555554 48999987642 1222333221134556666666 45554 32455 49999999987
Q ss_pred EEEE
Q 016751 349 FKCI 352 (383)
Q Consensus 349 ~~~v 352 (383)
...+
T Consensus 292 ~~~~ 295 (344)
T 4gqb_B 292 LFRS 295 (344)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 53
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.05 E-value=2.4 Score=37.74 Aligned_cols=119 Identities=11% Similarity=0.009 Sum_probs=66.1
Q ss_pred EECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCC-CCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEe
Q 016751 216 FLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMM-PYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVM 293 (383)
Q Consensus 216 ~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~l-P~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l 293 (383)
.-+|.+|...... ....|..||+.++..+.+.. + .... ....++.. +|+..++..... ..+.+|.+
T Consensus 48 spdg~l~~~~~~~------~~~~v~~~~~~~g~~~~~~~~~-~~~~--~p~~~a~spdg~~l~~~~~~~---~~v~v~~~ 115 (347)
T 3hfq_A 48 SAKDCLYSVDKED------DEGGIAAWQIDGQTAHKLNTVV-APGT--PPAYVAVDEARQLVYSANYHK---GTAEVMKI 115 (347)
T ss_dssp CTTCEEEEEEEET------TEEEEEEEEEETTEEEEEEEEE-EESC--CCSEEEEETTTTEEEEEETTT---TEEEEEEE
T ss_pred ccCCeEEEEEecC------CCceEEEEEecCCcEEEeeeee-cCCC--CCEEEEECCCCCEEEEEeCCC---CEEEEEEe
Confidence 3378888877631 12489999998887766522 2 1111 12234444 465433433333 58999999
Q ss_pred ccCCCCCCeEEEEEecCCCc---------eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCC-CCeEEEE
Q 016751 294 KEYGLTESWTKLYTIEKPQR---------IWWPLGFTERGKIFIRGECRHGGYGLLVYNPH-SDTFKCI 352 (383)
Q Consensus 294 ~~~~~~~~W~~~~~i~~~~~---------~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~-t~~~~~v 352 (383)
+.. .....+..+..... ....+++..+|++++. ...+. .+..||++ ++++..+
T Consensus 116 ~~~---g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~--~~~~~-~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 116 AAD---GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI--DLGSD-KVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp CTT---SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE--ETTTT-EEEEEEECTTSCEEEE
T ss_pred CCC---CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE--eCCCC-EEEEEEECCCCcEEEe
Confidence 753 23444444433210 1334666778886665 41233 58899988 5666543
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.04 E-value=5.4 Score=36.69 Aligned_cols=199 Identities=13% Similarity=0.111 Sum_probs=101.8
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
|.+++|.+.. +..++|||..|++...+-....... ...+.+.+. +.+-+ .......+.+|+.++++-...
T Consensus 114 S~~n~lAvgl----d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd----g~~la-sgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 114 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE----GNYLA-VGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT----SSEEE-EEETTSCEEEEETTTTEEEEE
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC----CCEEE-EEECCCeEEEEEcCCCcEEEE
Confidence 5567665543 6789999999998776544333322 256667664 33333 223367899999988643211
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLC 275 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~ 275 (383)
- .-... ... ++..+|.+-..+... ..+..+|..........+. .... ....+... +|...
T Consensus 185 ~-~~h~~----~v~---~~s~~~~~l~sgs~d--------~~i~~~d~~~~~~~~~~~~-~h~~--~~~~~~~~~~g~~l 245 (420)
T 4gga_A 185 M-TSHSA----RVG---SLSWNSYILSSGSRS--------GHIHHHDVRVAEHHVATLS-GHSQ--EVCGLRWAPDGRHL 245 (420)
T ss_dssp E-CCCSS----CEE---EEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEE-CCSS--CEEEEEECTTSSEE
T ss_pred E-eCCCC----ceE---EEeeCCCEEEEEeCC--------CceeEeeecccceeeEEec-cccc--ceeeeeecCCCCee
Confidence 1 11110 111 456667655544433 5788888776544333222 1111 11222222 35555
Q ss_pred EEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 276 VFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 276 ~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
+....+ ..+.+|...... ..+...............+++.. ++.++..+....++ .+..+|.++++...
T Consensus 246 ~s~~~D----~~v~i~~~~~~~--~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~-~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 246 ASGGND----NLVNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRIWNVCSGACLS 315 (420)
T ss_dssp EEEETT----SCEEEEESSCCS--SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC-EEEEEETTTTEEEE
T ss_pred eeeecc----ccceEEeecccc--ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC-EEEEEeCCccccce
Confidence 555544 488999886532 12222222221111233344443 33555442121234 58889999887544
No 55
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.93 E-value=4.1 Score=35.03 Aligned_cols=202 Identities=9% Similarity=0.069 Sum_probs=106.8
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCC----CceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcC
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP----RYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLR 189 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~----~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~ 189 (383)
+..+.+|.+.+.+. ....+.++|+..+....++...... ...++.+++. .+ .-++.-.. ...+.+|+..
T Consensus 35 v~~~~~g~l~v~~~--~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~---~g-~l~v~~~~~~~~i~~~d~~ 108 (286)
T 1q7f_A 35 VAVNAQNDIIVADT--NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRN---SG-DIIVTERSPTHQIQIYNQY 108 (286)
T ss_dssp EEECTTCCEEEEEG--GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETT---TT-EEEEEECGGGCEEEEECTT
T ss_pred EEECCCCCEEEEEC--CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcC---CC-eEEEEcCCCCCEEEEECCC
Confidence 34455677766653 4567899998866655565422111 1256666433 22 22222211 5678888844
Q ss_pred CCceeeeccCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEE
Q 016751 190 SNSWKNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYL 267 (383)
Q Consensus 190 t~~W~~~~~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l 267 (383)
...-+.+. ....... . ++. -+|.+|+..... ..|..||...+....+..+ .... ....+
T Consensus 109 g~~~~~~~-~~~~~~~----~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~~~~~~~~-~~~~--~p~~i 169 (286)
T 1q7f_A 109 GQFVRKFG-ATILQHP----R---GVTVDNKGRIIVVECKV--------MRVIIFDQNGNVLHKFGCS-KHLE--FPNGV 169 (286)
T ss_dssp SCEEEEEC-TTTCSCE----E---EEEECTTSCEEEEETTT--------TEEEEECTTSCEEEEEECT-TTCS--SEEEE
T ss_pred CcEEEEec-CccCCCc----e---EEEEeCCCCEEEEECCC--------CEEEEEcCCCCEEEEeCCC-CccC--CcEEE
Confidence 33323332 1111100 1 333 368887755433 5899999877666655433 2211 12335
Q ss_pred EEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC-c-eeEEEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 016751 268 NVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ-R-IWWPLGFTERGKIFIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 268 ~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~-~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~ 344 (383)
+.. +|+|++..... ..+.+|..+. .. +..+.... + ...-+++..+|.+++. ...+...+..||.
T Consensus 170 ~~~~~g~l~v~~~~~----~~i~~~~~~g-----~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~--~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 170 VVNDKQEIFISDNRA----HCVKVFNYEG-----QY--LRQIGGEGITNYPIGVGINSNGEILIA--DNHNNFNLTIFTQ 236 (286)
T ss_dssp EECSSSEEEEEEGGG----TEEEEEETTC-----CE--EEEESCTTTSCSEEEEEECTTCCEEEE--ECSSSCEEEEECT
T ss_pred EECCCCCEEEEECCC----CEEEEEcCCC-----CE--EEEEccCCccCCCcEEEECCCCCEEEE--eCCCCEEEEEECC
Confidence 544 47888776544 3677765421 12 22332221 1 2344566677889888 5222214999998
Q ss_pred CCCeEEEEEE
Q 016751 345 HSDTFKCIGV 354 (383)
Q Consensus 345 ~t~~~~~v~~ 354 (383)
+.+.++.+..
T Consensus 237 ~g~~~~~~~~ 246 (286)
T 1q7f_A 237 DGQLISALES 246 (286)
T ss_dssp TSCEEEEEEE
T ss_pred CCCEEEEEcc
Confidence 8777766654
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.71 E-value=4.8 Score=35.25 Aligned_cols=182 Identities=14% Similarity=0.084 Sum_probs=85.1
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.++|......................+.+. .....++.......+.+|+.+++.-...-..........
T Consensus 148 ~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~--- 221 (340)
T 4aow_A 148 RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN---SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV--- 221 (340)
T ss_dssp TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC---SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE---
T ss_pred CCCeEEEEEeCCCceEEEEeccccCcccceEEccC---CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEE---
Confidence 34556666665544333322221111123333333 222223332325678888888765432220111111100
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYE 289 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~ 289 (383)
.+.-+|.+...+..+ ..|..+|+.+..-.. +... . ....+....+...++...+ ..+.
T Consensus 222 ---~~s~~~~~l~s~s~D--------g~i~iwd~~~~~~~~~~~~~-~-----~v~~~~~~~~~~~~~~~~d----~~i~ 280 (340)
T 4aow_A 222 ---TVSPDGSLCASGGKD--------GQAMLWDLNEGKHLYTLDGG-D-----IINALCFSPNRYWLCAATG----PSIK 280 (340)
T ss_dssp ---EECTTSSEEEEEETT--------CEEEEEETTTTEEEEEEECS-S-----CEEEEEECSSSSEEEEEET----TEEE
T ss_pred ---EECCCCCEEEEEeCC--------CeEEEEEeccCceeeeecCC-c-----eEEeeecCCCCceeeccCC----CEEE
Confidence 122246555444433 588889988765422 2222 1 1123333444444444444 4889
Q ss_pred EEEeccCCCCCCeEEEEEecC---------CCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 290 LWVMKEYGLTESWTKLYTIEK---------PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 290 iW~l~~~~~~~~W~~~~~i~~---------~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+|.++.. .....+.. .......+++..+|..++. ...++ .+.+||++|++
T Consensus 281 iwd~~~~------~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s--gs~Dg-~v~iW~~~tGt 339 (340)
T 4aow_A 281 IWDLEGK------IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GYTDN-LVRVWQVTIGT 339 (340)
T ss_dssp EEETTTT------EEEEEECCC-------CCCCCEEEEEECTTSSEEEE--EETTS-CEEEEEEEC--
T ss_pred EEECCCC------eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE--EeCCC-EEEEEeCCCcC
Confidence 9977642 11111111 0103445667778877777 43455 49999999875
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.68 E-value=5.8 Score=36.15 Aligned_cols=183 Identities=12% Similarity=0.049 Sum_probs=96.9
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.+||..+++...+-..........+.+.+. + .+ ++.......+.+|+..++.-...-....... .
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~---~-~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~ 180 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHD---G-SF-LSVGLGNGLVDIYDVESQTKLRTMAGHQARV-----G 180 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTT---S-SE-EEEEETTSCEEEEETTTCCEEEEECCCSSCE-----E
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCC---C-CE-EEEECCCCeEEEEECcCCeEEEEecCCCCce-----E
Confidence 47789999999988766544432222355666654 2 23 3333336689999998765322210111111 1
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYE 289 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~ 289 (383)
++..+|.....+... ..|..+|+.+..-....+. .... ....+... +|.+.+++..+ ..+.
T Consensus 181 ---~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~l~s~~~d----~~v~ 242 (401)
T 4aez_A 181 ---CLSWNRHVLSSGSRS--------GAIHHHDVRIANHQIGTLQ-GHSS--EVCGLAWRSDGLQLASGGND----NVVQ 242 (401)
T ss_dssp ---EEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEE-CCSS--CEEEEEECTTSSEEEEEETT----SCEE
T ss_pred ---EEEECCCEEEEEcCC--------CCEEEEecccCcceeeEEc-CCCC--CeeEEEEcCCCCEEEEEeCC----CeEE
Confidence 455566655555443 6899999984332222221 1110 11223333 46666655555 4899
Q ss_pred EEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEee--CCceEEEEEeCCCCeEE
Q 016751 290 LWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECR--HGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 290 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~--~~~~~~~~yd~~t~~~~ 350 (383)
+|.+... .....+.........+.+..++ .+++. .. .++ .+..||+++++..
T Consensus 243 iwd~~~~------~~~~~~~~~~~~v~~~~~~p~~~~ll~~--~~gs~d~-~i~i~d~~~~~~~ 297 (401)
T 4aez_A 243 IWDARSS------IPKFTKTNHNAAVKAVAWCPWQSNLLAT--GGGTMDK-QIHFWNAATGARV 297 (401)
T ss_dssp EEETTCS------SEEEEECCCSSCCCEEEECTTSTTEEEE--ECCTTTC-EEEEEETTTCCEE
T ss_pred EccCCCC------CccEEecCCcceEEEEEECCCCCCEEEE--ecCCCCC-EEEEEECCCCCEE
Confidence 9988752 1222332111124445555544 56665 31 244 5999999887643
No 58
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.51 E-value=4.4 Score=34.33 Aligned_cols=195 Identities=13% Similarity=0.058 Sum_probs=97.7
Q ss_pred eEEEccCceEEE-eecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 114 DVVGSCNGVLCF-CSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 114 ~~~~s~~Gll~~-~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
.+....+|-+.+ ... ....+.++|+.+++...++.... ....++.+++. +. +........+.+|+..++.
T Consensus 28 ~i~~~~~g~l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~---g~---l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEG--MYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGA---GT---VYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp EEEECTTCCEEEEECS--SSCEEEEECC-----EECCCCSC-CSCCCEEECTT---CC---EEEEETTTEEEEECTTCSC
T ss_pred ceEECCCCCEEEEccC--CCCcEEEecCCCcccceEeeCCc-CCcceeEECCC---CC---EEEEcCCCEEEEEeCCCce
Confidence 344455677666 532 46788999998877665543221 11255667764 32 2222214578888887664
Q ss_pred eeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~ 270 (383)
-+... ..... ... ++.+ +|.+|+..... ..|..||..+......... ... ....++..
T Consensus 99 ~~~~~-~~~~~----~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~~~~~~~~-~~~---~p~~i~~~ 158 (270)
T 1rwi_B 99 QTVLP-FDGLN----YPE---GLAVDTQGAVYVADRGN--------NRVVKLAAGSKTQTVLPFT-GLN---DPDGVAVD 158 (270)
T ss_dssp CEECC-CCSCS----SEE---EEEECTTCCEEEEEGGG--------TEEEEECTTCCSCEECCCC-SCC---SCCCEEEC
T ss_pred Eeeee-cCCcC----CCc---ceEECCCCCEEEEECCC--------CEEEEEECCCceeEeeccc-cCC---CceeEEEe
Confidence 44332 11100 001 3333 68888765543 4789998776544332211 111 11234444
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+|+|++..... ..+.+|..+.. . .. ......+ ...-+++..+|.+|+. ...++ .+..||++++.
T Consensus 159 ~~g~l~v~~~~~----~~i~~~~~~~~---~--~~--~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~-~v~~~~~~~~~ 224 (270)
T 1rwi_B 159 NSGNVYVTDTDN----NRVVKLEAESN---N--QV--VLPFTDITAPWGIAVDEAGTVYVT--EHNTN-QVVKLLAGSTT 224 (270)
T ss_dssp TTCCEEEEEGGG----TEEEEECTTTC---C--EE--ECCCSSCCSEEEEEECTTCCEEEE--ETTTS-CEEEECTTCSC
T ss_pred CCCCEEEEECCC----CEEEEEecCCC---c--eE--eecccCCCCceEEEECCCCCEEEE--ECCCC-cEEEEcCCCCc
Confidence 57888776544 35555544321 1 11 1111111 2334556667788887 52234 49999998876
Q ss_pred EEE
Q 016751 349 FKC 351 (383)
Q Consensus 349 ~~~ 351 (383)
...
T Consensus 225 ~~~ 227 (270)
T 1rwi_B 225 STV 227 (270)
T ss_dssp CEE
T ss_pred cee
Confidence 544
No 59
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.42 E-value=3.6 Score=35.84 Aligned_cols=110 Identities=11% Similarity=0.078 Sum_probs=67.3
Q ss_pred ceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCC
Q 016751 219 GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYG 297 (383)
Q Consensus 219 G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~ 297 (383)
|.||...+.. ....|..+|+.+.+- ..+++| ... ....++..+++|++....++ .+++++-
T Consensus 32 g~Lyvstg~~------~~s~v~~iD~~tg~v~~~i~l~-~~~---fgeGi~~~g~~lyv~t~~~~------~v~viD~-- 93 (266)
T 2iwa_A 32 DTLFESTGLY------GRSSVRQVALQTGKVENIHKMD-DSY---FGEGLTLLNEKLYQVVWLKN------IGFIYDR-- 93 (266)
T ss_dssp TEEEEEECST------TTCEEEEEETTTCCEEEEEECC-TTC---CEEEEEEETTEEEEEETTCS------EEEEEET--
T ss_pred CeEEEECCCC------CCCEEEEEECCCCCEEEEEecC-CCc---ceEEEEEeCCEEEEEEecCC------EEEEEEC--
Confidence 7888866531 235899999998766 445666 422 22345666789999876543 3555553
Q ss_pred CCCCeEEEEEecCC-CceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE-EEEEEe
Q 016751 298 LTESWTKLYTIEKP-QRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF-KCIGVH 355 (383)
Q Consensus 298 ~~~~W~~~~~i~~~-~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~~-~~v~~~ 355 (383)
..-..+.+++.. . ...++..+| .+|+. . ... .+...|++|.+. +.+...
T Consensus 94 --~t~~v~~~i~~g~~---~g~glt~Dg~~l~vs--~-gs~-~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 94 --RTLSNIKNFTHQMK---DGWGLATDGKILYGS--D-GTS-ILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp --TTTEEEEEEECCSS---SCCEEEECSSSEEEE--C-SSS-EEEEECTTTCCEEEEEECE
T ss_pred --CCCcEEEEEECCCC---CeEEEEECCCEEEEE--C-CCC-eEEEEECCCCcEEEEEEEC
Confidence 224666677654 2 123444444 67765 3 333 699999999764 455543
No 60
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.36 E-value=5.1 Score=36.09 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=90.4
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCC---CCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSL---NPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~---~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
-+.+|.++... .++.+.|||..+++......... ......+.+.|. +. .++.......+.+|+.++++-
T Consensus 102 ~s~d~~~l~~s---~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd----g~-~l~sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 102 WVSEKGILVAS---DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD----GT-QAVSGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp EETTTEEEEEE---TTSCEEEC--------CCCCEEECCCSSCEEEEEECSS----SS-EEEEEETTSCEEEEETTTTEE
T ss_pred EcCCCCEEEEE---CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC----CC-EEEEEeCCCeEEEEECCCCcE
Confidence 34556665554 56789999998877554433211 111255566553 22 233333366789999888753
Q ss_pred eeeccCCCceeeeccCcccceeE--ECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEE
Q 016751 194 KNIAYGFPRSIEINRSHINSSVF--LNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNV 269 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~--~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~ 269 (383)
...-........ ++. -+|. +...+... ..|..+|+.+.+-... ... ... .....+.-
T Consensus 174 ~~~~~~h~~~v~--------~v~~s~~~~~~~~s~~~d--------g~v~~wd~~~~~~~~~~~~~-~~~--~~v~~v~~ 234 (357)
T 4g56_B 174 LKSYNAHSSEVN--------CVAACPGKDTIFLSCGED--------GRILLWDTRKPKPATRIDFC-ASD--TIPTSVTW 234 (357)
T ss_dssp EEEECCCSSCEE--------EEEECTTCSSCEEEEETT--------SCEEECCTTSSSCBCBCCCT-TCC--SCEEEEEE
T ss_pred EEEEcCCCCCEE--------EEEEccCCCceeeeeccC--------CceEEEECCCCceeeeeeec-ccc--ccccchhh
Confidence 322101111110 222 2332 22223322 4688889877543221 221 111 11122333
Q ss_pred e--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCC
Q 016751 270 F--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 270 ~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t 346 (383)
. ++.+.+.+..+ ..+.+|-+.... ....+.........+++..++ .++.. ...++ .+.+||.++
T Consensus 235 sp~~~~~la~g~~d----~~i~~wd~~~~~------~~~~~~~~~~~v~~l~~sp~~~~~las--gs~D~-~i~iwd~~~ 301 (357)
T 4g56_B 235 HPEKDDTFACGDET----GNVSLVNIKNPD------SAQTSAVHSQNITGLAYSYHSSPFLAS--ISEDC-TVAVLDADF 301 (357)
T ss_dssp CTTSTTEEEEEESS----SCEEEEESSCGG------GCEEECCCSSCEEEEEECSSSSCCEEE--EETTS-CEEEECTTS
T ss_pred hhcccceEEEeecc----cceeEEECCCCc------EeEEEeccceeEEEEEEcCCCCCEEEE--EeCCC-EEEEEECCC
Confidence 2 35565555544 489999886421 112232221124455665555 45554 32455 499999999
Q ss_pred CeEEE
Q 016751 347 DTFKC 351 (383)
Q Consensus 347 ~~~~~ 351 (383)
++...
T Consensus 302 ~~~~~ 306 (357)
T 4g56_B 302 SEVFR 306 (357)
T ss_dssp CEEEE
T ss_pred CcEeE
Confidence 87654
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.03 E-value=5.7 Score=34.57 Aligned_cols=199 Identities=10% Similarity=0.057 Sum_probs=101.6
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCcccee----ecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYM----TLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS 190 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~----~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t 190 (383)
+.-+.+|-++... .++.+.+||..+++.. .++..........+.+.+. + . .++.......+.+|+.++
T Consensus 57 ~~~~~~~~~l~~~---~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~-~l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 57 VTISNPTRHVYTG---GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD---G-C-TLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp EEECSSSSEEEEE---CBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT---S-S-EEEEEESSSEEEEEECCC
T ss_pred EEEecCCcEEEEc---CCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC---C-C-EEEEEcCCCcEEEEECCC
Confidence 3445566655555 3678889988775422 1111111112255666654 2 2 333333367899999998
Q ss_pred CceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEE
Q 016751 191 NSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNV 269 (383)
Q Consensus 191 ~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~ 269 (383)
+..+... ...........- ...-+|.....+... ..|..+|+.+.+.... ... .. ....+..
T Consensus 129 ~~~~~~~-~~~~~~~~i~~~---~~~~~~~~l~~~~~d--------g~v~~~d~~~~~~~~~~~~~-~~----~i~~~~~ 191 (337)
T 1gxr_A 129 PTPRIKA-ELTSSAPACYAL---AISPDSKVCFSCCSD--------GNIAVWDLHNQTLVRQFQGH-TD----GASCIDI 191 (337)
T ss_dssp C--EEEE-EEECSSSCEEEE---EECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCC-SS----CEEEEEE
T ss_pred CCcceee-ecccCCCceEEE---EECCCCCEEEEEeCC--------CcEEEEeCCCCceeeeeecc-cC----ceEEEEE
Confidence 8754333 111000000000 112255555544433 4789999987754332 222 11 1223333
Q ss_pred e-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 270 F-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 270 ~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
. +|...++...+ ..+.+|.++.. .....+.... ....+.+..+|..++. ...++ .+..||+++++
T Consensus 192 ~~~~~~l~~~~~d----g~i~~~d~~~~------~~~~~~~~~~-~v~~~~~s~~~~~l~~--~~~~~-~i~~~~~~~~~ 257 (337)
T 1gxr_A 192 SNDGTKLWTGGLD----NTVRSWDLREG------RQLQQHDFTS-QIFSLGYCPTGEWLAV--GMESS-NVEVLHVNKPD 257 (337)
T ss_dssp CTTSSEEEEEETT----SEEEEEETTTT------EEEEEEECSS-CEEEEEECTTSSEEEE--EETTS-CEEEEETTSSC
T ss_pred CCCCCEEEEEecC----CcEEEEECCCC------ceEeeecCCC-ceEEEEECCCCCEEEE--EcCCC-cEEEEECCCCC
Confidence 3 45555555544 48999988652 2333333332 2444566667766666 42455 49999999887
Q ss_pred EEEE
Q 016751 349 FKCI 352 (383)
Q Consensus 349 ~~~v 352 (383)
...+
T Consensus 258 ~~~~ 261 (337)
T 1gxr_A 258 KYQL 261 (337)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6544
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.93 E-value=6.3 Score=34.88 Aligned_cols=168 Identities=11% Similarity=0.129 Sum_probs=87.2
Q ss_pred eeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcC-CCceeeecc-CCCceeeeccCcccceeEECce-EEEEEeeccCCCC
Q 016751 158 LGFGVNSVSGHLDDFKVVTISV-NADAEVYSLR-SNSWKNIAY-GFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDN 233 (383)
Q Consensus 158 ~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~-t~~W~~~~~-~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~ 233 (383)
..+.++|. +. ++.... ...+.+|+.. +++...... ..+..... ..- .+.-+|. +|......
T Consensus 144 ~~~~~spd---g~---l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p-~~~---~~spdg~~l~v~~~~~----- 208 (347)
T 3hfq_A 144 HYTDLTPD---NR---LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP-RHL---VFSPDGQYAFLAGELS----- 208 (347)
T ss_dssp EEEEECTT---SC---EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCE-EEE---EECTTSSEEEEEETTT-----
T ss_pred eEEEECCC---Cc---EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCC-ceE---EECCCCCEEEEEeCCC-----
Confidence 45677765 43 333332 5679999998 566554330 11111000 000 2334676 56544332
Q ss_pred CCCcEEEEEECC--CCeeeEe----CCCCCCCCC-CCceEEEEe-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEE
Q 016751 234 SCPWLIVSFDFA--KEIFQTV----MMPYDLSTD-DADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTK 304 (383)
Q Consensus 234 ~~~~~il~fD~~--~~~~~~i----~lP~~~~~~-~~~~~l~~~-~g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~ 304 (383)
..+..||+. +.++..+ ..| ..... .....++.. +|+ |++..... ..+.+|.++.. ..+..
T Consensus 209 ---~~v~v~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~i~~spdG~~l~v~~~~~----~~v~v~~~~~~---g~~~~ 277 (347)
T 3hfq_A 209 ---SQIASLKYDTQTGAFTQLGIVKTIP-ADYTAHNGAAAIRLSHDGHFLYVSNRGY----NTLAVFAVTAD---GHLTL 277 (347)
T ss_dssp ---TEEEEEEEETTTTEEEEEEEEESSC-TTCCSCCEEEEEEECTTSCEEEEEEETT----TEEEEEEECGG---GCEEE
T ss_pred ---CEEEEEEecCCCCceEEeeeeeecC-CCCCCCCcceeEEECCCCCEEEEEeCCC----CEEEEEEECCC---CcEEE
Confidence 456666655 5665443 334 22111 112234433 465 55555444 58999999752 34666
Q ss_pred EEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEE--eCCCCeEEEEEE
Q 016751 305 LYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVY--NPHSDTFKCIGV 354 (383)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~y--d~~t~~~~~v~~ 354 (383)
+..++........+++..+|+ |++. ...++ .+.+| |.++++++.+.-
T Consensus 278 ~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~~-~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 278 IQQISTEGDFPRDFDLDPTEAFVVVV--NQNTD-NATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEE--ETTTT-EEEEEEECTTTCCEEEEEE
T ss_pred eEEEecCCCCcCeEEECCCCCEEEEE--EcCCC-cEEEEEEeCCCCeEEeccc
Confidence 666665221234466777786 5555 31234 35666 889999988753
No 63
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.62 E-value=5.9 Score=33.92 Aligned_cols=196 Identities=11% Similarity=0.100 Sum_probs=104.3
Q ss_pred eEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCc
Q 016751 114 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNS 192 (383)
Q Consensus 114 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~ 192 (383)
.+....+|-+.+... ....+.++||. ++...++.+.......++..|+. . . +..... ...+.+|+.. +.
T Consensus 24 ~i~~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~---g-~--l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH--KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSL---G-D--IWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp EEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT---S-C--EEEEETTTTEEEEECTT-SC
T ss_pred eeeECCCCCEEEEcC--CCCeEEEECCC-CceEEEECCCCCCcceeEEECCC---C-C--EEEEecCCCeEEEECCC-CC
Confidence 345556777766653 46789999998 66665443222122255666653 2 2 222222 4568888887 76
Q ss_pred eeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~ 270 (383)
++... .+.... ... ++.+ +|.+|+..... ..|..||.. .+...+.+| .... ....++..
T Consensus 94 ~~~~~--~~~~~~--~~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~-g~~~~~~~~-~~~~--~~~~i~~d 154 (300)
T 2qc5_A 94 FTEYP--LPQPDS--GPY---GITEGLNGDIWFTQLNG--------DRIGKLTAD-GTIYEYDLP-NKGS--YPAFITLG 154 (300)
T ss_dssp EEEEE--CSSTTC--CEE---EEEECSTTCEEEEETTT--------TEEEEECTT-SCEEEEECS-STTC--CEEEEEEC
T ss_pred eEEec--CCCCCC--CCc---cceECCCCCEEEEccCC--------CeEEEECCC-CCEEEccCC-CCCC--CceeEEEC
Confidence 66544 111100 011 3333 58887755433 489999998 666655555 3221 22334443
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
+|+|++...... . |++++.. .+... ..++.......-+.+..+|.+++. ..... .+..||+ ++++
T Consensus 155 ~~g~l~v~~~~~~----~--i~~~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~-~i~~~~~-~g~~ 220 (300)
T 2qc5_A 155 SDNALWFTENQNN----S--IGRITNT---GKLEE-YPLPTNAAAPVGITSGNDGALWFV--EIMGN-KIGRITT-TGEI 220 (300)
T ss_dssp TTSSEEEEETTTT----E--EEEECTT---CCEEE-EECSSTTCCEEEEEECTTSSEEEE--ETTTT-EEEEECT-TCCE
T ss_pred CCCCEEEEecCCC----e--EEEECCC---CcEEE-eeCCCCCCCcceEEECCCCCEEEE--ccCCC-EEEEEcC-CCcE
Confidence 478877664332 3 4444431 23333 222221112333455567788887 52233 4999999 5666
Q ss_pred EEE
Q 016751 350 KCI 352 (383)
Q Consensus 350 ~~v 352 (383)
..+
T Consensus 221 ~~~ 223 (300)
T 2qc5_A 221 SEY 223 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 64
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.33 E-value=6.7 Score=34.00 Aligned_cols=191 Identities=12% Similarity=0.065 Sum_probs=95.1
Q ss_pred cCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC--ceee
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN--SWKN 195 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~--~W~~ 195 (383)
..|-+++... ....++++|+.|++.+. ++.... .......+.+. . + ++. .....+..|+. ++ -|+.
T Consensus 3 ~~~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pd---G-~--ilv-s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 3 SPQHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKA---G-E--ILF-SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCCEEEEECT--TCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTT---S-C--EEE-ECBSEEEEECT-TSCEEEEE
T ss_pred CCCcEEEeeC--CCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCC---C-C--EEE-eCCCCEEEECC-CCCEEEEE
Confidence 3344444442 67788999998877443 443221 01122334443 2 2 222 23567888888 44 5765
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCC--CceEEE-EeCC
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDD--ADKYLN-VFDG 272 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~--~~~~l~-~~~g 272 (383)
-. ....... . . .+..+|.++...... ...++.||...+....+.+. ...... ....+. ..+|
T Consensus 72 ~~-~~~~~~~--~-~---~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~-~~~~~~~~~~~~v~~~~~G 136 (276)
T 3no2_A 72 AA-PAGCEMQ--T-A---RILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFE-TGIERPHAQFRQINKNKKG 136 (276)
T ss_dssp EC-CTTCEEE--E-E---EECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEEC-CSCSSGGGSCSCCEECTTS
T ss_pred cC-CCCcccc--c-c---EECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEecc-CCCCcccccccCceECCCC
Confidence 43 2111111 1 1 455678777765431 24789999865543334332 211000 011112 2346
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 273 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
.+.++.... ..+..|-.+ + +..|+... +... .. .....+|++++. ...++ +++.+|++|++..
T Consensus 137 ~~lv~~~~~----~~v~~~d~~--G-~~~w~~~~--~~~~--~~-~~~~~~g~~~v~--~~~~~-~v~~~d~~tG~~~ 199 (276)
T 3no2_A 137 NYLVPLFAT----SEVREIAPN--G-QLLNSVKL--SGTP--FS-SAFLDNGDCLVA--CGDAH-CFVQLNLESNRIV 199 (276)
T ss_dssp CEEEEETTT----TEEEEECTT--S-CEEEEEEC--SSCC--CE-EEECTTSCEEEE--CBTTS-EEEEECTTTCCEE
T ss_pred CEEEEecCC----CEEEEECCC--C-CEEEEEEC--CCCc--cc-eeEcCCCCEEEE--eCCCC-eEEEEeCcCCcEE
Confidence 665554433 355555443 2 34565432 2111 11 333457788887 52444 4999999987754
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.70 E-value=8.1 Score=33.80 Aligned_cols=200 Identities=12% Similarity=-0.037 Sum_probs=99.3
Q ss_pred EccCce-EEEeecCCCCceEEEEcc-CccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc--
Q 016751 117 GSCNGV-LCFCSNGSDRSLIYLWNP-LIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-- 192 (383)
Q Consensus 117 ~s~~Gl-l~~~~~~~~~~~~~v~NP-~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-- 192 (383)
-+.+|- .++... .++.+.+||. .+++...+...........+.+.+ .-.++.......+.+|+.++..
T Consensus 64 ~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~------~~~l~s~~~d~~i~iwd~~~~~~~ 135 (342)
T 1yfq_A 64 FIDNTDLQIYVGT--VQGEILKVDLIGSPSFQALTNNEANLGICRICKYG------DDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp EEESSSEEEEEEE--TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET------TTEEEEEETTSEEEEECHHHHTTB
T ss_pred ECCCCCcEEEEEc--CCCeEEEEEeccCCceEeccccCCCCceEEEEeCC------CCEEEEEcCCCeEEEEcccccccc
Confidence 344555 444332 5788999999 888876665421222224444443 1233333335678888876400
Q ss_pred -----eeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCC-Ce--eeEeCCCCCCCCCCCc
Q 016751 193 -----WKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAK-EI--FQTVMMPYDLSTDDAD 264 (383)
Q Consensus 193 -----W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~-~~--~~~i~lP~~~~~~~~~ 264 (383)
.+.+. ....... -. ++.+.+.-...+... ..|..||+.+ .. ......+ ... ..
T Consensus 136 ~~~~~~~~~~-~~~~~~~---v~---~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~-~~~---~i 196 (342)
T 1yfq_A 136 VIAVKNLNSN-NTKVKNK---IF---TMDTNSSRLIVGMNN--------SQVQWFRLPLCEDDNGTIEESG-LKY---QI 196 (342)
T ss_dssp CEEEEESCSS-SSSSCCC---EE---EEEECSSEEEEEEST--------TEEEEEESSCCTTCCCEEEECS-CSS---CE
T ss_pred cccccCCeee-EEeeCCc---eE---EEEecCCcEEEEeCC--------CeEEEEECCccccccceeeecC-CCC---ce
Confidence 22222 2221100 01 333333322233222 4899999987 32 3333322 111 12
Q ss_pred eEEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC---------ceeEEEEEeeCCcEEEEEEee
Q 016751 265 KYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ---------RIWWPLGFTERGKIFIRGECR 333 (383)
Q Consensus 265 ~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~---------~~~~~~~~~~~g~i~~~~~~~ 333 (383)
..+... +|.+.++...+ ..+.+|.++..+.+........+.... .....+.+..+|..++. ..
T Consensus 197 ~~i~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~ 270 (342)
T 1yfq_A 197 RDVALLPKEQEGYACSSID----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT--AG 270 (342)
T ss_dssp EEEEECSGGGCEEEEEETT----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE--EE
T ss_pred eEEEECCCCCCEEEEEecC----CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE--ec
Confidence 334444 46666666555 499999997641111111122222110 02445566667766665 42
Q ss_pred CCceEEEEEeCCCCeEE
Q 016751 334 HGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 334 ~~~~~~~~yd~~t~~~~ 350 (383)
.++ .+.+||+++++..
T Consensus 271 ~dg-~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 271 SDG-IISCWNLQTRKKI 286 (342)
T ss_dssp TTS-CEEEEETTTTEEE
T ss_pred CCc-eEEEEcCccHhHh
Confidence 455 4999999988753
No 66
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=90.63 E-value=8.8 Score=34.14 Aligned_cols=195 Identities=12% Similarity=0.180 Sum_probs=97.9
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCC-C-CCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRP-S-LNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~-~-~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
+.-+-+|-++.... .++.+.|||..++++...... . .......+.+.|. + . .++.......+.+++..++.
T Consensus 22 l~~sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---g-~-~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 22 LAWNPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC---G-N-YLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp EEECTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT---S-S-EEEEEETTSCEEEEEECCC-
T ss_pred EEECCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC---C-C-EEEEEECCCcEEEEEccCCC
Confidence 33455565555443 577888998877765422111 1 1112255666654 2 2 23333335678899888877
Q ss_pred eeeeccCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCe-eeEe-CCCCCCCCCCCceEEE
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTV-MMPYDLSTDDADKYLN 268 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~-~~~i-~lP~~~~~~~~~~~l~ 268 (383)
++.+. .+........ ++. -+|.+...+..+ ..|..+|+.++. ...+ .+. .... ....+.
T Consensus 95 ~~~~~-~~~~h~~~v~-----~v~~sp~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~-~h~~--~v~~~~ 157 (345)
T 3fm0_A 95 FECVT-TLEGHENEVK-----SVAWAPSGNLLATCSRD--------KSVWVWEVDEEDEYECVSVLN-SHTQ--DVKHVV 157 (345)
T ss_dssp EEEEE-EECCCSSCEE-----EEEECTTSSEEEEEETT--------SCEEEEEECTTSCEEEEEEEC-CCCS--CEEEEE
T ss_pred eEEEE-EccCCCCCce-----EEEEeCCCCEEEEEECC--------CeEEEEECCCCCCeEEEEEec-CcCC--CeEEEE
Confidence 65443 2211000000 222 245554444433 478888887542 3222 122 1111 112233
Q ss_pred Ee-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 016751 269 VF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 269 ~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~ 344 (383)
-. +|.+.+....+ ..+.+|.++. ..|.....+.-.......+.+..+|..++. ...++. +..+|.
T Consensus 158 ~~p~~~~l~s~s~d----~~i~~w~~~~----~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s--~s~D~~-v~iW~~ 223 (345)
T 3fm0_A 158 WHPSQELLASASYD----DTVKLYREEE----DDWVCCATLEGHESTVWSLAFDPSGQRLAS--CSDDRT-VRIWRQ 223 (345)
T ss_dssp ECSSSSCEEEEETT----SCEEEEEEET----TEEEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSC-EEEEEE
T ss_pred ECCCCCEEEEEeCC----CcEEEEEecC----CCEEEEEEecCCCCceEEEEECCCCCEEEE--EeCCCe-EEEecc
Confidence 22 35555555544 4899998875 447666666433223555666677776666 424443 777764
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=90.15 E-value=7.7 Score=32.72 Aligned_cols=190 Identities=12% Similarity=0.014 Sum_probs=100.8
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCce
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W 193 (383)
+....+|.+.+.. ....++++|+.++....++.... ....++.+++. +. +..... ...+.+|+.++...
T Consensus 72 i~~~~~g~l~v~~---~~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~---g~---l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 72 LAVDGAGTVYVTD---FNNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQ---GA---VYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp EEECTTCCEEEEE---TTTEEEEECTTCSCCEECCCCSC-SSEEEEEECTT---CC---EEEEEGGGTEEEEECTTCCSC
T ss_pred eEECCCCCEEEEc---CCCEEEEEeCCCceEeeeecCCc-CCCcceEECCC---CC---EEEEECCCCEEEEEECCCcee
Confidence 4444567776665 35689999998877665543221 12256777764 32 333222 45778886665544
Q ss_pred eeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
.... .... . ... ++.+ +|.+|+..... ..|..||..+......... . . .....++..
T Consensus 142 ~~~~-~~~~--~--~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~~~~~~~~-~-~--~~p~~i~~d~ 201 (270)
T 1rwi_B 142 TVLP-FTGL--N--DPD---GVAVDNSGNVYVTDTDN--------NRVVKLEAESNNQVVLPFT-D-I--TAPWGIAVDE 201 (270)
T ss_dssp EECC-CCSC--C--SCC---CEEECTTCCEEEEEGGG--------TEEEEECTTTCCEEECCCS-S-C--CSEEEEEECT
T ss_pred Eeec-cccC--C--Cce---eEEEeCCCCEEEEECCC--------CEEEEEecCCCceEeeccc-C-C--CCceEEEECC
Confidence 3222 1110 0 111 3333 58888766543 4899999987665443222 1 1 122345554
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+|.|++...... .+.+|..+. ..... +....+ ....+++..+|.+|+. ...++ .+..|++..++
T Consensus 202 ~g~l~v~~~~~~----~v~~~~~~~---~~~~~----~~~~~~~~p~~i~~~~~g~l~v~--~~~~~-~v~~~~~~~~~ 266 (270)
T 1rwi_B 202 AGTVYVTEHNTN----QVVKLLAGS---TTSTV----LPFTGLNTPLAVAVDSDRTVYVA--DRGND-RVVKLTSLEHH 266 (270)
T ss_dssp TCCEEEEETTTS----CEEEECTTC---SCCEE----CCCCSCSCEEEEEECTTCCEEEE--EGGGT-EEEEECCCGGG
T ss_pred CCCEEEEECCCC----cEEEEcCCC---Cccee----eccCCCCCceeEEECCCCCEEEE--ECCCC-EEEEEcCCCcc
Confidence 468887765443 555554332 11111 221111 2344555667888887 52334 58999887654
No 68
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.54 E-value=9.7 Score=32.95 Aligned_cols=140 Identities=11% Similarity=0.042 Sum_probs=79.6
Q ss_pred CeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCC
Q 016751 181 ADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLS 259 (383)
Q Consensus 181 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~ 259 (383)
..+.+++.++++=...- .++.. .+... -...++.+|.+.... ..+.+||..+.+- ..++.| ..
T Consensus 65 S~v~~vD~~Tgkv~~~~-~l~~~-~FgeG----it~~g~~ly~ltw~~--------~~v~v~D~~t~~~~~ti~~~-~e- 128 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQI-ELGKR-YFGEG----ISDWKDKIVGLTWKN--------GLGFVWNIRNLRQVRSFNYD-GE- 128 (262)
T ss_dssp EEEEEECTTTCCEEEEE-ECCTT-CCEEE----EEEETTEEEEEESSS--------SEEEEEETTTCCEEEEEECS-SC-
T ss_pred ceEEEEECCCCcEEEEE-ecCCc-cceeE----EEEeCCEEEEEEeeC--------CEEEEEECccCcEEEEEECC-CC-
Confidence 47888888887432211 22221 11121 245677999887765 6899999987554 455665 31
Q ss_pred CCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC--c---eeEEEEEeeCCcEEEEEEeeC
Q 016751 260 TDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ--R---IWWPLGFTERGKIFIRGECRH 334 (383)
Q Consensus 260 ~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~---~~~~~~~~~~g~i~~~~~~~~ 334 (383)
...++.-+++|++..+ .. .||+++-. . -..+.+|.... . ...-+.. .+|.||.. . .
T Consensus 129 ----G~glt~dg~~L~~SdG-s~------~i~~iDp~--T--~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan--~-w 189 (262)
T 3nol_A 129 ----GWGLTHNDQYLIMSDG-TP------VLRFLDPE--S--LTPVRTITVTAHGEELPELNELEW-VDGEIFAN--V-W 189 (262)
T ss_dssp ----CCCEEECSSCEEECCS-SS------EEEEECTT--T--CSEEEEEECEETTEECCCEEEEEE-ETTEEEEE--E-T
T ss_pred ----ceEEecCCCEEEEECC-CC------eEEEEcCC--C--CeEEEEEEeccCCccccccceeEE-ECCEEEEE--E-c
Confidence 2345555667777653 21 47777642 1 22334444321 0 1111333 36888877 5 4
Q ss_pred CceEEEEEeCCCCeEE-EEEEe
Q 016751 335 GGYGLLVYNPHSDTFK-CIGVH 355 (383)
Q Consensus 335 ~~~~~~~yd~~t~~~~-~v~~~ 355 (383)
....+.+.|++|++.. .++..
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECT
T ss_pred cCCeEEEEECCCCcEEEEEECC
Confidence 4446999999999975 45654
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.49 E-value=10 Score=33.19 Aligned_cols=207 Identities=7% Similarity=0.061 Sum_probs=95.7
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC-ceeeecc
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN-SWKNIAY 198 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~-~W~~~~~ 198 (383)
|-+++... .++.+.+||..++++..+-...... ....+.+.|. ...-.++.......+.+|+.+++ .|+...
T Consensus 71 ~~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~---~~g~~lasgs~D~~i~lwd~~~~~~~~~~~- 144 (316)
T 3bg1_A 71 GNILASCS--YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH---DYGLILACGSSDGAISLLTYTGEGQWEVKK- 144 (316)
T ss_dssp SSCEEEEE--TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT---TTCSCEEEECSSSCEEEEEECSSSCEEECC-
T ss_pred CCEEEEEE--CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC---CCCcEEEEEcCCCCEEEEecCCCCCcceee-
Confidence 54444442 6788999999887543322111111 1245566654 32333333333567888988775 675432
Q ss_pred CCCc---ee---eeccCcccceeE---------ECceEEEEEeeccCCCCCCCcEEEEEECCC-CeeeEe-CCCCCCCCC
Q 016751 199 GFPR---SI---EINRSHINSSVF---------LNGSVHWCARFSCYHDNSCPWLIVSFDFAK-EIFQTV-MMPYDLSTD 261 (383)
Q Consensus 199 ~~p~---~~---~~~~~~~~~~v~---------~~G~lYw~~~~~~~~~~~~~~~il~fD~~~-~~~~~i-~lP~~~~~~ 261 (383)
.... .. .+..... .+.. -+|.....+. ....|..+|+.+ +.|..+ .+. .+..
T Consensus 145 ~~~~h~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~sgs--------~D~~v~lWd~~~~~~~~~~~~l~-~h~~- 213 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVV-PGSLIDHPSGQKPNYIKRFASGG--------CDNLIKLWKEEEDGQWKEEQKLE-AHSD- 213 (316)
T ss_dssp BTTSSSSCBCCCEECCCCC-C------CCSCCCCCCCBEECCB--------TTSBCCEEEECTTSCEEEEECCB-CCSS-
T ss_pred eeccccCCcceEEEccccC-CccccccccccCccccceEEEec--------CCCeEEEEEeCCCCccceeeecc-cCCC-
Confidence 1110 00 0000000 0000 0012222111 124677788763 345444 333 2211
Q ss_pred CCceEEEEeC-C----eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc
Q 016751 262 DADKYLNVFD-G----YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG 336 (383)
Q Consensus 262 ~~~~~l~~~~-g----~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~ 336 (383)
....+.-.. + .+.+....+ ..+.||.++... ...|.....-.... ....+++..+|.++.. ...++
T Consensus 214 -~V~~v~~sp~~~~~~~~las~s~D----~~v~iw~~~~~~-~~~~~~~~~~~~~~-~v~~v~~sp~g~~las--~~~D~ 284 (316)
T 3bg1_A 214 -WVRDVAWAPSIGLPTSTIASCSQD----GRVFIWTCDDAS-SNTWSPKLLHKFND-VVWHVSWSITANILAV--SGGDN 284 (316)
T ss_dssp -CEEEEECCCCSSCSCCEEEEEETT----CEEEEEECSSTT-CCCCBCCEEEECSS-CEEEEEECTTTCCEEE--EESSS
T ss_pred -ceEEEEecCCCCCCCceEEEEcCC----CeEEEEEccCcc-ccchhhhhhhcCCC-cEEEEEEcCCCCEEEE--EcCCC
Confidence 111222221 2 444444444 599999987531 12343211111111 2455667777776665 43455
Q ss_pred eEEEEEeCC-CCeEEEEEE
Q 016751 337 YGLLVYNPH-SDTFKCIGV 354 (383)
Q Consensus 337 ~~~~~yd~~-t~~~~~v~~ 354 (383)
. +..+|.. .++|..+..
T Consensus 285 ~-v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 285 K-VTLWKESVDGQWVCISD 302 (316)
T ss_dssp C-EEEEEECTTSCEEEEEE
T ss_pred e-EEEEEECCCCcEEEeee
Confidence 3 8888875 456777743
No 70
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.43 E-value=11 Score=33.35 Aligned_cols=140 Identities=12% Similarity=0.054 Sum_probs=72.2
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCc-e-eeeccCC-Cc--eeee
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNS-W-KNIAYGF-PR--SIEI 206 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~-W-~~~~~~~-p~--~~~~ 206 (383)
..++++|+.+++....-.........++.+|+. +. ++.... ...+.+|+..... . ..+.... +. ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~---g~---l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD---GN---YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTT---SC---EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCC---CC---EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 369999999888654322111112266777765 33 332222 5578888875541 1 2221000 00 0001
Q ss_pred ccCcccceeEE---CceEEEEEe-eccCCCCCCCcEEEEEECCCCeeeEeCCCCCCC------CCCCceEEEEe-C-CeE
Q 016751 207 NRSHINSSVFL---NGSVHWCAR-FSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLS------TDDADKYLNVF-D-GYL 274 (383)
Q Consensus 207 ~~~~~~~~v~~---~G~lYw~~~-~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~------~~~~~~~l~~~-~-g~L 274 (383)
.... ++.+ +|.+|+... .. ..|..||........+..+ ... .-..-..++.. + |.|
T Consensus 143 ~~P~---~ia~~~~~g~lyv~d~~~~--------~~I~~~~~~g~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 143 CQPT---DVAVEPSTGAVFVSDGYCN--------SRIVQFSPSGKFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp SSEE---EEEECTTTCCEEEEECSSC--------CEEEEECTTSCEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred CCCc---EEEEeCCCCeEEEEeCCCC--------CeEEEEcCCCCEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEE
Confidence 1111 4444 689999774 33 5899999766555554321 110 00012334544 3 788
Q ss_pred EEEEecCCCCccEEEEEEec
Q 016751 275 CVFATIPNNTFRSYELWVMK 294 (383)
Q Consensus 275 ~~v~~~~~~~~~~l~iW~l~ 294 (383)
+++.... ..+.+|..+
T Consensus 211 ~v~d~~~----~~I~~~~~~ 226 (329)
T 3fvz_A 211 CVADREN----GRIQCFKTD 226 (329)
T ss_dssp EEEETTT----TEEEEEETT
T ss_pred EEEECCC----CEEEEEECC
Confidence 8887655 477777765
No 71
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.34 E-value=10 Score=32.87 Aligned_cols=200 Identities=8% Similarity=0.036 Sum_probs=94.0
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
.+.+|-.+.... .++.+.|||..++....+-....... ...+.+.+. ...-.++.......+.+++.+++.|..
T Consensus 17 ~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~---~~g~~l~s~s~D~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 17 MDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP---KFGTILASCSYDGKVMIWKEENGRWSQ 91 (297)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG---GGCSEEEEEETTTEEEEEEBSSSCBCC
T ss_pred ECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC---CcCCEEEEEcCCCEEEEEEcCCCceEE
Confidence 345565555443 56778888875432211111111111 144555432 212233333336789999999888865
Q ss_pred eccCCCceeeeccCcccceeEEC----ceEEEEEeeccCCCCCCCcEEEEEECCCCe-eeEeCCCCCCCCCCCceEEEEe
Q 016751 196 IAYGFPRSIEINRSHINSSVFLN----GSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTVMMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~----G~lYw~~~~~~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~~l~~~ 270 (383)
+. .......... ++.+. |.+...+..+ ..|..+|+.+.. +....+. .+.. ....+.-.
T Consensus 92 ~~-~~~~h~~~v~-----~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~~~~~~~~~~~~-~h~~--~v~~~~~~ 154 (297)
T 2pm7_B 92 IA-VHAVHSASVN-----SVQWAPHEYGPMLLVASSD--------GKVSVVEFKENGTTSPIIID-AHAI--GVNSASWA 154 (297)
T ss_dssp CE-EECCCSSCEE-----EEEECCGGGCSEEEEEETT--------SEEEEEEBCSSSCBCCEEEE-CCSS--CEEEEEEC
T ss_pred EE-EeecCCCcee-----EEEeCcCCCCcEEEEEECC--------CcEEEEEecCCCceeeeeee-cccC--ccceEeec
Confidence 43 2110000000 22221 4443333332 478888887542 2111111 0000 00011111
Q ss_pred --------------CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC---cEEEEEEee
Q 016751 271 --------------DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG---KIFIRGECR 333 (383)
Q Consensus 271 --------------~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g---~i~~~~~~~ 333 (383)
++++.+....+ ..+.+|.++.. ...|.....+.........+.+..++ ..+.. ..
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D----~~v~lwd~~~~--~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las--~s 226 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS--VS 226 (297)
T ss_dssp CCC------------CCEEEEEETT----SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE--EE
T ss_pred CCcccccccCCCCCCcceEEEEcCC----CcEEEEEEcCC--CceEEEEEEecCCCCceEEEEECCCCCCceEEEE--EE
Confidence 13444444444 58999998752 24466666665332234556665553 55555 32
Q ss_pred CCceEEEEEeCCCC
Q 016751 334 HGGYGLLVYNPHSD 347 (383)
Q Consensus 334 ~~~~~~~~yd~~t~ 347 (383)
.++ .+..+|+++.
T Consensus 227 ~D~-~v~iWd~~~~ 239 (297)
T 2pm7_B 227 QDR-TCIIWTQDNE 239 (297)
T ss_dssp TTS-CEEEEEESST
T ss_pred CCC-cEEEEEeCCC
Confidence 455 4888888764
No 72
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.11 E-value=9.8 Score=32.46 Aligned_cols=197 Identities=11% Similarity=0.077 Sum_probs=103.4
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCce
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W 193 (383)
+....+|.+.+... ....++++||. ++...++.+.......++.+++. . . +..... ...+..|+.. ++.
T Consensus 67 i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~---g-~--l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 67 LIVSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLN---G-D--IWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECST---T-C--EEEEETTTTEEEEECTT-SCE
T ss_pred EEECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCCCCCCCccceECCC---C-C--EEEEccCCCeEEEECCC-CCE
Confidence 44456677766652 45679999998 66654433222222356666654 3 2 222222 4467778776 555
Q ss_pred eeeccCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
+... .+.... ... ++. -+|.+|+..... ..|..||. +.++..+.+| .... ....++..
T Consensus 137 ~~~~--~~~~~~--~~~---~i~~d~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~d~ 197 (300)
T 2qc5_A 137 YEYD--LPNKGS--YPA---FITLGSDNALWFTENQN--------NSIGRITN-TGKLEEYPLP-TNAA--APVGITSGN 197 (300)
T ss_dssp EEEE--CSSTTC--CEE---EEEECTTSSEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECT
T ss_pred EEcc--CCCCCC--Cce---eEEECCCCCEEEEecCC--------CeEEEECC-CCcEEEeeCC-CCCC--CcceEEECC
Confidence 5433 111000 001 333 368877755433 48999999 6666666555 3321 22334444
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
+|.|++...... .+.+ ++.. ..+.. ..++........+++..+|.|++. ..... .+..||+ ++++.
T Consensus 198 ~g~l~v~~~~~~----~i~~--~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~-~i~~~~~-~g~~~ 263 (300)
T 2qc5_A 198 DGALWFVEIMGN----KIGR--ITTT---GEISE-YDIPTPNARPHAITAGKNSEIWFT--EWGAN-QIGRITN-DNTIQ 263 (300)
T ss_dssp TSSEEEEETTTT----EEEE--ECTT---CCEEE-EECSSTTCCEEEEEECSTTCEEEE--ETTTT-EEEEECT-TSCEE
T ss_pred CCCEEEEccCCC----EEEE--EcCC---CcEEE-EECCCCCCCceEEEECCCCCEEEe--ccCCC-eEEEECC-CCcEE
Confidence 578887765432 4443 3321 23333 223321112334555667888887 52234 4999999 56666
Q ss_pred EEEE
Q 016751 351 CIGV 354 (383)
Q Consensus 351 ~v~~ 354 (383)
.+.+
T Consensus 264 ~~~~ 267 (300)
T 2qc5_A 264 EYQL 267 (300)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5544
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=88.41 E-value=14 Score=33.25 Aligned_cols=180 Identities=13% Similarity=0.031 Sum_probs=88.3
Q ss_pred CCceEEEEccCccceeecCCCCCCC-C-------------ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNP-R-------------YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~-~-------------~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
.++.+.++|..+++....-...... . ...+.+.+. . +++.......+.+|+..++.-...
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-----D-KFVIPGPKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET-----T-EEEEECGGGCEEEEETTCSSCSEE
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-----C-EEEEEcCCCeEEEEEcCCCceeee
Confidence 4667888888776654422211111 0 122233322 1 233333366889999887632211
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCCeEE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDGYLC 275 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g~L~ 275 (383)
-.......... ...-+|.....+... ..|..||+.+.+.... ... .. ....+.-..+.+.
T Consensus 243 ~~~~~~~i~~~------~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~-~~----~i~~~~~~~~~~l 303 (425)
T 1r5m_A 243 LIGHHGPISVL------EFNDTNKLLLSASDD--------GTLRIWHGGNGNSQNCFYGH-SQ----SIVSASWVGDDKV 303 (425)
T ss_dssp ECCCSSCEEEE------EEETTTTEEEEEETT--------SCEEEECSSSBSCSEEECCC-SS----CEEEEEEETTTEE
T ss_pred eccCCCceEEE------EECCCCCEEEEEcCC--------CEEEEEECCCCccceEecCC-Cc----cEEEEEECCCCEE
Confidence 10111111100 222256544444433 4788899887644222 211 11 1233444433344
Q ss_pred EEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 276 VFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 276 ~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
++...+ ..+.+|.++. ...+..+.........+.+..+|.+++. ...++ .+.+||+++.+
T Consensus 304 ~~~~~d----~~i~i~d~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg-~i~i~~~~~~~ 363 (425)
T 1r5m_A 304 ISCSMD----GSVRLWSLKQ------NTLLALSIVDGVPIFAGRISQDGQKYAV--AFMDG-QVNVYDLKKLN 363 (425)
T ss_dssp EEEETT----SEEEEEETTT------TEEEEEEECTTCCEEEEEECTTSSEEEE--EETTS-CEEEEECHHHH
T ss_pred EEEeCC----CcEEEEECCC------CcEeEecccCCccEEEEEEcCCCCEEEE--EECCC-eEEEEECCCCc
Confidence 444433 5899998865 2333344332212455666677777666 42455 49999998876
No 74
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.89 E-value=20 Score=34.50 Aligned_cols=198 Identities=12% Similarity=0.059 Sum_probs=102.5
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEc--CCCcee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSL--RSNSWK 194 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss--~t~~W~ 194 (383)
+-+|.+++... .+..+.++|+.|++... ++.... ..++.++|. +.|-+ .......+.+|+. .+++
T Consensus 146 ~p~~~~~vs~~--~d~~V~v~D~~t~~~~~~i~~g~~---~~~v~~spd----g~~l~-v~~~d~~V~v~D~~~~t~~-- 213 (543)
T 1nir_A 146 DLPNLFSVTLR--DAGQIALVDGDSKKIVKVIDTGYA---VHISRMSAS----GRYLL-VIGRDARIDMIDLWAKEPT-- 213 (543)
T ss_dssp CGGGEEEEEEG--GGTEEEEEETTTCCEEEEEECSTT---EEEEEECTT----SCEEE-EEETTSEEEEEETTSSSCE--
T ss_pred CCCCEEEEEEc--CCCeEEEEECCCceEEEEEecCcc---cceEEECCC----CCEEE-EECCCCeEEEEECcCCCCc--
Confidence 34677777664 56789999999987543 332111 234556654 23333 3333578999999 5543
Q ss_pred eeccCCCceeeeccCcccceeEE----Cce-EEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCC-------C
Q 016751 195 NIAYGFPRSIEINRSHINSSVFL----NGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLST-------D 261 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~----~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~-------~ 261 (383)
.+. .++..... ..- .+.- +|. +|...... ..|..+|..+.+- ..+..+ .... .
T Consensus 214 ~~~-~i~~g~~p-~~v---a~sp~~~~dg~~l~v~~~~~--------~~v~v~D~~t~~~~~~i~~~-g~~~~~~~~~~~ 279 (543)
T 1nir_A 214 KVA-EIKIGIEA-RSV---ESSKFKGYEDRYTIAGAYWP--------PQFAIMDGETLEPKQIVSTR-GMTVDTQTYHPE 279 (543)
T ss_dssp EEE-EEECCSEE-EEE---EECCSTTCTTTEEEEEEEES--------SEEEEEETTTCCEEEEEECC-EECSSSCCEESC
T ss_pred EEE-EEecCCCc-ceE---EeCCCcCCCCCEEEEEEccC--------CeEEEEeccccccceeeccc-CcccCccccccC
Confidence 222 22211111 100 2222 565 44443332 5789999887654 333432 1100 0
Q ss_pred CCceEEEEeC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEE
Q 016751 262 DADKYLNVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLL 340 (383)
Q Consensus 262 ~~~~~l~~~~-g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 340 (383)
.....+.... |..+++...+. ..+.+|-+.... . .++..++... ...-+++..+|+.+++. ...+. ++.
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~---g~i~vvd~~~~~--~--l~~~~i~~~~-~~~~~~~spdg~~l~va-~~~~~-~v~ 349 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKET---GKVLLVNYKDID--N--LTVTSIGAAP-FLHDGGWDSSHRYFMTA-ANNSN-KVA 349 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTT---TEEEEEECTTSS--S--CEEEEEECCS-SCCCEEECTTSCEEEEE-EGGGT-EEE
T ss_pred CceEEEEECCCCCEEEEEECCC---CeEEEEEecCCC--c--ceeEEeccCc-CccCceECCCCCEEEEE-ecCCC-eEE
Confidence 0112333332 55555555544 577777665421 1 2234454432 24446777788754441 31233 599
Q ss_pred EEeCCCCeEEE
Q 016751 341 VYNPHSDTFKC 351 (383)
Q Consensus 341 ~yd~~t~~~~~ 351 (383)
++|.+|+++..
T Consensus 350 v~D~~tg~l~~ 360 (543)
T 1nir_A 350 VIDSKDRRLSA 360 (543)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCeEEE
Confidence 99999998765
No 75
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.83 E-value=12 Score=31.94 Aligned_cols=141 Identities=12% Similarity=0.026 Sum_probs=81.8
Q ss_pred cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDL 258 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~ 258 (383)
...+.+++..+++=...- .++... +... -...++.+|.+.... ..+.+||..+.+- ..++.| .
T Consensus 42 ~S~v~~vD~~tgkv~~~~-~l~~~~-fgeG----i~~~~~~ly~ltw~~--------~~v~v~D~~tl~~~~ti~~~-~- 105 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRA-EVPPPY-FGAG----IVAWRDRLIQLTWRN--------HEGFVYDLATLTPRARFRYP-G- 105 (243)
T ss_dssp SCEEEEEETTTCCEEEEE-ECCTTC-CEEE----EEEETTEEEEEESSS--------SEEEEEETTTTEEEEEEECS-S-
T ss_pred CceEEEEECCCCCEEEEE-eCCCCc-ceeE----EEEeCCEEEEEEeeC--------CEEEEEECCcCcEEEEEeCC-C-
Confidence 357888999887433222 233221 1121 345678999988765 6999999987654 445655 2
Q ss_pred CCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-----eeEEEEEeeCCcEEEEEEee
Q 016751 259 STDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-----IWWPLGFTERGKIFIRGECR 333 (383)
Q Consensus 259 ~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-----~~~~~~~~~~g~i~~~~~~~ 333 (383)
....|+..+++|++..+ . . .|++++-. .. ..+.+|..... ...-+- ..+|+||.. .
T Consensus 106 ----~Gwglt~dg~~L~vSdg-s----~--~l~~iDp~--t~--~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyan--v- 166 (243)
T 3mbr_X 106 ----EGWALTSDDSHLYMSDG-T----A--VIRKLDPD--TL--QQVGSIKVTAGGRPLDNLNELE-WVNGELLAN--V- 166 (243)
T ss_dssp ----CCCEEEECSSCEEEECS-S----S--EEEEECTT--TC--CEEEEEECEETTEECCCEEEEE-EETTEEEEE--E-
T ss_pred ----CceEEeeCCCEEEEECC-C----C--eEEEEeCC--CC--eEEEEEEEccCCcccccceeeE-EeCCEEEEE--E-
Confidence 12456655678888764 2 2 36667642 12 23344443210 111122 237888876 5
Q ss_pred CCceEEEEEeCCCCeEE-EEEEe
Q 016751 334 HGGYGLLVYNPHSDTFK-CIGVH 355 (383)
Q Consensus 334 ~~~~~~~~yd~~t~~~~-~v~~~ 355 (383)
.....+.+.|++|++.. .+++.
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECG
T ss_pred CCCCeEEEEECCCCCEEEEEECC
Confidence 43336999999999875 55654
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=87.63 E-value=16 Score=33.07 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=101.6
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecC-----CCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLP-----RPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP-----~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
+|-+++... .++.+.|||..+++...-. ...... ....+.+.+. .. ..++.......+.+|+.+++..
T Consensus 93 ~~~~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~-~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 93 NDNVIASGS--EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT---AQ-NVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp CTTEEEEEE--TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS---BT-TEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEe--CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC---CC-CEEEEEcCCCEEEEEECCCCCc
Confidence 555544442 6788999998876432100 000011 1245566654 32 2343333366899999988755
Q ss_pred eeec--cCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeC-CCCCCCCCCCceEEE
Q 016751 194 KNIA--YGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVM-MPYDLSTDDADKYLN 268 (383)
Q Consensus 194 ~~~~--~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~ 268 (383)
...- ........ ++.+ +|.....+..+ ..|..+|+.+.+-.... .. .... ....+.
T Consensus 167 ~~~~~~~~~~~~v~--------~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~-~~~~--~~~~~~ 227 (402)
T 2aq5_A 167 VLTLGPDVHPDTIY--------SVDWSRDGALICTSCRD--------KRVRVIEPRKGTVVAEKDRP-HEGT--RPVHAV 227 (402)
T ss_dssp EEEECTTTCCSCEE--------EEEECTTSSCEEEEETT--------SEEEEEETTTTEEEEEEECS-SCSS--SCCEEE
T ss_pred cEEEecCCCCCceE--------EEEECCCCCEEEEEecC--------CcEEEEeCCCCceeeeeccC-CCCC--cceEEE
Confidence 3221 01111111 2222 56555544433 58999999887653321 22 1111 112333
Q ss_pred Ee-CCeEEEEEe--cCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEE-EEEeeCCceEEEEEeC
Q 016751 269 VF-DGYLCVFAT--IPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFI-RGECRHGGYGLLVYNP 344 (383)
Q Consensus 269 ~~-~g~L~~v~~--~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~yd~ 344 (383)
-. +|++.+++. ... ..+.+|.+..... -.....+.... ....+.+..+|..++ . ...++ .+.+||+
T Consensus 228 ~~~~~~~l~~g~~~~~d---~~i~iwd~~~~~~---~~~~~~~~~~~-~v~~~~~s~~~~~l~~~--g~~dg-~i~i~d~ 297 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSE---RQVALWDTKHLEE---PLSLQELDTSS-GVLLPFFDPDTNIVYLC--GKGDS-SIRYFEI 297 (402)
T ss_dssp ECSTTEEEEEEECTTCC---EEEEEEETTBCSS---CSEEEECCCCS-SCEEEEEETTTTEEEEE--ETTCS-CEEEEEE
T ss_pred EcCCCcEEEEeccCCCC---ceEEEEcCccccC---CceEEeccCCC-ceeEEEEcCCCCEEEEE--EcCCC-eEEEEEe
Confidence 33 466655552 222 6899999876321 11222333322 244456666776554 4 31345 4999999
Q ss_pred CCCe--EEEEE
Q 016751 345 HSDT--FKCIG 353 (383)
Q Consensus 345 ~t~~--~~~v~ 353 (383)
++++ +..+.
T Consensus 298 ~~~~~~~~~l~ 308 (402)
T 2aq5_A 298 TSEAPFLHYLS 308 (402)
T ss_dssp CSSTTCEEEEE
T ss_pred cCCCcceEeec
Confidence 9887 55553
No 77
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=87.62 E-value=12 Score=31.79 Aligned_cols=197 Identities=9% Similarity=0.009 Sum_probs=102.9
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCce
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W 193 (383)
+....+|.+.+... ....++++||. ++...++.+.......++.+++. . . +..... ...+.+|+. ++..
T Consensus 62 i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~---g-~--l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 62 LTISSDGEVWFTEN--AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPN---G-D--IWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT---S-C--EEEEETTTTEEEEECT-TCCE
T ss_pred EEECCCCCEEEeCC--CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCC---C-C--EEEEecCCceEEEECC-CCCE
Confidence 44456777766652 45679999986 44444332211112256666654 2 1 222221 457778887 6655
Q ss_pred eeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
+.......... .. ++.. +|.+|+..... ..|..||+ +.++..+.+| .... ....++..
T Consensus 132 ~~~~~~~~~~~----~~---~i~~~~~g~l~v~~~~~--------~~i~~~~~-~g~~~~~~~~-~~~~--~~~~i~~~~ 192 (299)
T 2z2n_A 132 REYELPNKGSY----PS---FITLGSDNALWFTENQN--------NAIGRITE-SGDITEFKIP-TPAS--GPVGITKGN 192 (299)
T ss_dssp EEEECSSTTCC----EE---EEEECTTSCEEEEETTT--------TEEEEECT-TCCEEEEECS-STTC--CEEEEEECT
T ss_pred EEecCCCCCCC----Cc---eEEEcCCCCEEEEeCCC--------CEEEEEcC-CCcEEEeeCC-CCCC--cceeEEECC
Confidence 54431111110 01 3333 57887755432 48999999 7777766555 3221 22334444
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
+|+|++..... ..+.++.. . ..... ..++........+.+..+|.+++. ..... .+..||+ +++++
T Consensus 193 ~g~l~v~~~~~----~~i~~~~~-~----g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~-~i~~~d~-~g~~~ 258 (299)
T 2z2n_A 193 DDALWFVEIIG----NKIGRITT-S----GEITE-FKIPTPNARPHAITAGAGIDLWFT--EWGAN-KIGRLTS-NNIIE 258 (299)
T ss_dssp TSSEEEEETTT----TEEEEECT-T----CCEEE-EECSSTTCCEEEEEECSTTCEEEE--ETTTT-EEEEEET-TTEEE
T ss_pred CCCEEEEccCC----ceEEEECC-C----CcEEE-EECCCCCCCceeEEECCCCCEEEe--ccCCc-eEEEECC-CCceE
Confidence 47887776433 24544433 1 22332 223321112344555667888887 52234 4999999 56666
Q ss_pred EEEE
Q 016751 351 CIGV 354 (383)
Q Consensus 351 ~v~~ 354 (383)
.+..
T Consensus 259 ~~~~ 262 (299)
T 2z2n_A 259 EYPI 262 (299)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 6544
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.56 E-value=15 Score=32.78 Aligned_cols=198 Identities=9% Similarity=0.019 Sum_probs=94.2
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCC-----------CCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEE
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRP-----------SLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYS 187 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~-----------~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vys 187 (383)
+|-+++... .++.+.|||..+++....... .... ....+.+.+. ...+ ++.......+.+|+
T Consensus 55 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~-l~s~~~d~~i~iwd 128 (408)
T 4a11_B 55 EGRYMLSGG--SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH---DTGM-FTSSSFDKTLKVWD 128 (408)
T ss_dssp TCCEEEEEE--TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT---CTTC-EEEEETTSEEEEEE
T ss_pred CCCEEEEEc--CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC---CCcE-EEEEeCCCeEEEee
Confidence 444444332 566788888776543322110 0011 1255666664 3333 33333366899999
Q ss_pred cCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceE
Q 016751 188 LRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKY 266 (383)
Q Consensus 188 s~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~ 266 (383)
..++.-...- ..+......... +..-+|.+...+... ..|..||+.+..... +... . . ....
T Consensus 129 ~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~v~~~d~~~~~~~~~~~~~-~-~---~v~~ 191 (408)
T 4a11_B 129 TNTLQTADVF-NFEETVYSHHMS---PVSTKHCLVAVGTRG--------PKVQLCDLKSGSCSHILQGH-R-Q---EILA 191 (408)
T ss_dssp TTTTEEEEEE-ECSSCEEEEEEC---SSCSSCCEEEEEESS--------SSEEEEESSSSCCCEEECCC-C-S---CEEE
T ss_pred CCCCccceec-cCCCceeeeEee---cCCCCCcEEEEEcCC--------CeEEEEeCCCcceeeeecCC-C-C---cEEE
Confidence 9887543332 222111111100 111234444444433 478889988664422 2211 1 1 1223
Q ss_pred EEEeC-Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEE--------Ee----cCCCceeEEEEEeeCCcEEEEEEe
Q 016751 267 LNVFD-GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLY--------TI----EKPQRIWWPLGFTERGKIFIRGEC 332 (383)
Q Consensus 267 l~~~~-g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~--------~i----~~~~~~~~~~~~~~~g~i~~~~~~ 332 (383)
+.... |. +.+....+ ..+.+|.+..... ...... .+ .........+.+..+|..++. .
T Consensus 192 ~~~~~~~~~ll~~~~~d----g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~ 263 (408)
T 4a11_B 192 VSWSPRYDYILATASAD----SRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT--V 263 (408)
T ss_dssp EEECSSCTTEEEEEETT----SCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE--E
T ss_pred EEECCCCCcEEEEEcCC----CcEEEEECCCCCc--ccccccccccccceeeccccccccCceeEEEEcCCCCEEEE--e
Confidence 33333 44 55555544 4899998865320 000000 00 000003445666667766666 4
Q ss_pred eCCceEEEEEeCCCCeE
Q 016751 333 RHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 333 ~~~~~~~~~yd~~t~~~ 349 (383)
..++ .+.+||+++++.
T Consensus 264 ~~dg-~i~vwd~~~~~~ 279 (408)
T 4a11_B 264 GTDN-RMRLWNSSNGEN 279 (408)
T ss_dssp ETTS-CEEEEETTTCCB
T ss_pred cCCC-eEEEEECCCCcc
Confidence 3455 499999998753
No 79
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=87.53 E-value=6.5 Score=36.21 Aligned_cols=122 Identities=9% Similarity=0.034 Sum_probs=70.2
Q ss_pred CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe---CC-------CCCCCCCCCceEEEEe--CCeEEEEEecCCC--
Q 016751 218 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---MM-------PYDLSTDDADKYLNVF--DGYLCVFATIPNN-- 283 (383)
Q Consensus 218 ~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i---~l-------P~~~~~~~~~~~l~~~--~g~L~~v~~~~~~-- 283 (383)
+|.++|....+ .+.++|+.++.-..+ .+ + .-..... ..++.. +++||++......
T Consensus 237 dG~~~~vs~~g---------~V~v~d~~~~~~~v~~~~~~~~~~~~~~-g~~p~g~-q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 237 AGRLVWPTYTG---------KIHQIDLSSGDAKFLPAVEALTEAERAD-GWRPGGW-QQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp TTEEEEEBTTS---------EEEEEECTTSSCEECCCEESSCHHHHHT-TEEECSS-SCEEEETTTTEEEEEEEECCTTC
T ss_pred CCcEEEEeCCC---------EEEEEECCCCcceeecceeccccccccc-cccCCCc-ceeeECCCCCeEEEEeccccccc
Confidence 78888876644 799999987653222 10 0 0000111 123333 4788887653210
Q ss_pred -CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc--EEEEEEeeCCceEEEEEeCCCCeEE-EEEEecCc
Q 016751 284 -TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK--IFIRGECRHGGYGLLVYNPHSDTFK-CIGVHLPY 358 (383)
Q Consensus 284 -~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~--i~~~~~~~~~~~~~~~yd~~t~~~~-~v~~~~~~ 358 (383)
....-+||+++- ..+..+.+|+... ...-+++..+|+ +|.. ....+ .+.+||..|++.. .+...+.+
T Consensus 306 hk~~~~~V~viD~----~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~t--n~~~~-~VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 306 HKTASRFVVVLDA----KTGERLAKFEMGH-EIDSINVSQDEKPLLYAL--STGDK-TLYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp TTSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECSSSSCEEEEE--ETTTT-EEEEEETTTCCEEEEECCCCSS
T ss_pred cCCCCCEEEEEEC----CCCeEEEEEECCC-CcceEEECCCCCeEEEEE--cCCCC-eEEEEECCCCcEEEEecCCCCC
Confidence 123578999986 3466667776643 233467777774 4444 31234 5999999998754 55555543
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=87.44 E-value=14 Score=32.34 Aligned_cols=199 Identities=10% Similarity=0.061 Sum_probs=94.0
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
-+.+|-.++... .++.+.+||..+++...+.... .....+.+.+. .+.-.++.......+.+|+.+++.-...
T Consensus 94 ~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~---~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 94 WSDDGSKVFTAS--CDKTAKMWDLSSNQAIQIAQHD--APVKTIHWIKA---PNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECS--SCEEEEEEEEC---SSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred ECcCCCEEEEEc--CCCcEEEEEcCCCCceeecccc--CceEEEEEEeC---CCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 344554443332 5778999999988877653311 11244555333 3333344444367899999887642211
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee--eEeCCCCCCCCCCCceEEEEe-CC-
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF--QTVMMPYDLSTDDADKYLNVF-DG- 272 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~--~~i~lP~~~~~~~~~~~l~~~-~g- 272 (383)
- ..+..... .......++. +... ..+..||+.+..- ..+..+ ... ....+... .+
T Consensus 167 ~-~~~~~~~~-------~~~~~~~~~~-~~~~--------~~i~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 225 (368)
T 3mmy_A 167 L-QLPERCYC-------ADVIYPMAVV-ATAE--------RGLIVYQLENQPSEFRRIESP-LKH---QHRCVAIFKDKQ 225 (368)
T ss_dssp E-ECSSCEEE-------EEEETTEEEE-EEGG--------GCEEEEECSSSCEEEEECCCS-CSS---CEEEEEEEECTT
T ss_pred E-ecCCCceE-------EEecCCeeEE-EeCC--------CcEEEEEeccccchhhhcccc-ccC---CCceEEEcccCC
Confidence 1 11111110 1222333333 3333 3788888876543 333322 111 11122221 11
Q ss_pred ---eEEEEEecCCCCccEEEEEEeccCCC-CCCeEEEE-Eec-CC--Cc----eeEEEEEeeCCcEEEEEEeeCCceEEE
Q 016751 273 ---YLCVFATIPNNTFRSYELWVMKEYGL-TESWTKLY-TIE-KP--QR----IWWPLGFTERGKIFIRGECRHGGYGLL 340 (383)
Q Consensus 273 ---~L~~v~~~~~~~~~~l~iW~l~~~~~-~~~W~~~~-~i~-~~--~~----~~~~~~~~~~g~i~~~~~~~~~~~~~~ 340 (383)
...++...+ ..+.+|.++.... ........ ... .. .. ....+.+..+|..++. ...++ .+.
T Consensus 226 ~~~~~~~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s--~~~dg-~i~ 298 (368)
T 3mmy_A 226 NKPTGFALGSIE----GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT--VGSDG-RFS 298 (368)
T ss_dssp SCEEEEEEEETT----SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE--EETTS-CEE
T ss_pred CCCCeEEEecCC----CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEE--EccCC-eEE
Confidence 223333333 5899999875311 11111110 000 00 00 1344556667766666 42455 499
Q ss_pred EEeCCCCeEE
Q 016751 341 VYNPHSDTFK 350 (383)
Q Consensus 341 ~yd~~t~~~~ 350 (383)
+||.++++..
T Consensus 299 iwd~~~~~~~ 308 (368)
T 3mmy_A 299 FWDKDARTKL 308 (368)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999987653
No 81
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.35 E-value=18 Score=33.35 Aligned_cols=202 Identities=13% Similarity=0.051 Sum_probs=104.8
Q ss_pred eEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-c-CeEEEEEcCCC
Q 016751 114 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-N-ADAEVYSLRSN 191 (383)
Q Consensus 114 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~-~~~~vyss~t~ 191 (383)
.+....+|-|.+.+. ....+.++|+.+++...+....... . +.+++. .+ .++.... . ..+.+++..++
T Consensus 135 ~la~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~--~-ia~~~~---g~--~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGG--K-PAVTKD---KQ--RVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp EEEECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBC--B-CEECTT---SS--EEEEEBSSTTCEEEEEEGGGT
T ss_pred EEEEeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCC--c-eeEecC---CC--cEEEEecCCCceEEEEEcCCC
Confidence 344456787777763 5678999999988776654432211 2 555554 32 2332222 2 26777777654
Q ss_pred c-eeeeccCCCc-eeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCc-
Q 016751 192 S-WKNIAYGFPR-SIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDAD- 264 (383)
Q Consensus 192 ~-W~~~~~~~p~-~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~- 264 (383)
. .+.+. .... ... ... ++.+ +|.||+. ... ..|..||+.+.....+ ..+... .....
T Consensus 205 ~~~~~~g-~~~~~~~~--~p~---~iav~p~~g~lyv~-d~~--------~~I~~~d~~~~~~~~~~~~~~~g-~~~~~P 268 (409)
T 3hrp_A 205 WAPTRIG-QLGSTFSG--KIG---AVALDETEEWLYFV-DSN--------KNFGRFNVKTQEVTLIKQLELSG-SLGTNP 268 (409)
T ss_dssp TCEEEEE-ECCTTSCS--CCC---BCEECTTSSEEEEE-CTT--------CEEEEEETTTCCEEEEEECCCCS-CCCCSS
T ss_pred ceeEEee-eccchhcC--CcE---EEEEeCCCCeEEEE-ECC--------CcEEEEECCCCCEEEEecccccC-CCCCCc
Confidence 2 23332 1111 111 111 2332 6899993 322 4899999988765554 111011 11112
Q ss_pred e-EEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec-C----------CCc-eeEEEEEeeCCcEEEE
Q 016751 265 K-YLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-K----------PQR-IWWPLGFTERGKIFIR 329 (383)
Q Consensus 265 ~-~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~----------~~~-~~~~~~~~~~g~i~~~ 329 (383)
. .++.. +|.|++...... . |++++..+ .-.....-. . ..+ ...-+++..+|.||+.
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~~----~--I~~~~~~g---~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNLS----S--VYKITPDG---ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CCEEEEETTTTEEEEEETTTT----E--EEEECTTC---CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred cccEEEeCCCCEEEEEeCCCC----E--EEEEecCC---CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 2 55555 578888765443 3 44444321 111111111 0 000 1233455667899998
Q ss_pred EEeeC-CceEEEEEeCCCCeEEEEE
Q 016751 330 GECRH-GGYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 330 ~~~~~-~~~~~~~yd~~t~~~~~v~ 353 (383)
. . ....+..+|+.++++..+.
T Consensus 340 --d-~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 340 --D-GFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp --E-TTTTCEEEEEETTTTEEEEEE
T ss_pred --e-CCCCCEEEEEECCCCEEEEEe
Confidence 6 3 3335999998888877663
No 82
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=87.20 E-value=14 Score=31.97 Aligned_cols=193 Identities=11% Similarity=0.121 Sum_probs=99.9
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
.-+.+|-.++... .++.+.++|..+++........... ....+.+.+. + . .++.......+.+|+.++++..
T Consensus 104 ~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~---~-~-~l~~~~~dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 104 KLLPDGCTLIVGG--EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD---S-K-VCFSCCSDGNIAVWDLHNQTLV 176 (337)
T ss_dssp EECTTSSEEEEEE--SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT---S-S-EEEEEETTSCEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEc--CCCcEEEEECCCCCcceeeecccCCCceEEEEECCC---C-C-EEEEEeCCCcEEEEeCCCCcee
Confidence 3444554433332 5778999998887633322221111 1245555553 2 2 2333333567899999887543
Q ss_pred eeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-
Q 016751 195 NIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~- 270 (383)
..-........ ++.+ +|.....+... ..|..||+.+.+-.. +..+ .. ...+...
T Consensus 177 ~~~~~~~~~i~--------~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~-~~-----v~~~~~s~ 234 (337)
T 1gxr_A 177 RQFQGHTDGAS--------CIDISNDGTKLWTGGLD--------NTVRSWDLREGRQLQQHDFT-SQ-----IFSLGYCP 234 (337)
T ss_dssp EEECCCSSCEE--------EEEECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECS-SC-----EEEEEECT
T ss_pred eeeecccCceE--------EEEECCCCCEEEEEecC--------CcEEEEECCCCceEeeecCC-Cc-----eEEEEECC
Confidence 22101111111 2222 56555555433 589999998765433 2333 21 1223333
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
+|.+.++...+ ..+.+|.++.. . . ..+.........+.+..+|..++. ...++ .+..||.++++..
T Consensus 235 ~~~~l~~~~~~----~~i~~~~~~~~---~---~-~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg-~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 235 TGEWLAVGMES----SNVEVLHVNKP---D---K-YQLHLHESCVLSLKFAYCGKWFVS--TGKDN-LLNAWRTPYGASI 300 (337)
T ss_dssp TSSEEEEEETT----SCEEEEETTSS---C---E-EEECCCSSCEEEEEECTTSSEEEE--EETTS-EEEEEETTTCCEE
T ss_pred CCCEEEEEcCC----CcEEEEECCCC---C---e-EEEcCCccceeEEEECCCCCEEEE--ecCCC-cEEEEECCCCeEE
Confidence 35665555544 48999988752 1 1 122211113455666677776666 43455 4999999998765
Q ss_pred E
Q 016751 351 C 351 (383)
Q Consensus 351 ~ 351 (383)
.
T Consensus 301 ~ 301 (337)
T 1gxr_A 301 F 301 (337)
T ss_dssp E
T ss_pred E
Confidence 3
No 83
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=86.91 E-value=15 Score=32.19 Aligned_cols=193 Identities=12% Similarity=0.052 Sum_probs=99.5
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
+.+|-++.... .++.+.+||..+++... +...+. ....+.+.|. + . .++.......+.+|+.+++.-...
T Consensus 89 ~~~~~~l~s~s--~D~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spd---g-~-~l~~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 89 SHTLPIAASSS--LDAHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPD---S-Q-YLATGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp CSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCTT--CCCCEEECTT---S-S-EEEEECTTSEEEEEETTTCSEEEE
T ss_pred CCCCCEEEEEe--CCCcEEEEECCCCCEEEEEeCCCc--cEEEEEECCC---C-C-EEEEEcCCCcEEEEEcCCCceeEE
Confidence 44455544443 67889999998876543 322111 1134556554 2 2 222222256788999887643211
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-CCeE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYL 274 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~-~g~L 274 (383)
-.......... ...-+|.....+... ..|..+|+.+.+... +.-. .. ....+.-. +|++
T Consensus 160 ~~~~~~~v~~~------~~spdg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~h-~~----~v~~l~~spd~~~ 220 (321)
T 3ow8_A 160 LDTRGKFILSI------AYSPDGKYLASGAID--------GIINIFDIATGKLLHTLEGH-AM----PIRSLTFSPDSQL 220 (321)
T ss_dssp EECSSSCEEEE------EECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCC-SS----CCCEEEECTTSCE
T ss_pred ecCCCceEEEE------EECCCCCEEEEEcCC--------CeEEEEECCCCcEEEEEccc-CC----ceeEEEEcCCCCE
Confidence 10111000000 122256554444433 478899998776432 2221 11 11233333 4565
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 275 CVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 275 ~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
.+....+ ..+.+|.++.. .....+.........+++..+|..++. ...++ .+.++|+++++...
T Consensus 221 l~s~s~d----g~i~iwd~~~~------~~~~~~~~h~~~v~~~~~sp~~~~l~s--~s~D~-~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 221 LVTASDD----GYIKIYDVQHA------NLAGTLSGHASWVLNVAFCPDDTHFVS--SSSDK-SVKVWDVGTRTCVH 284 (321)
T ss_dssp EEEECTT----SCEEEEETTTC------CEEEEECCCSSCEEEEEECTTSSEEEE--EETTS-CEEEEETTTTEEEE
T ss_pred EEEEcCC----CeEEEEECCCc------ceeEEEcCCCCceEEEEECCCCCEEEE--EeCCC-cEEEEeCCCCEEEE
Confidence 5555444 58999988752 223333322213455666777776666 43455 49999999887543
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.77 E-value=15 Score=32.04 Aligned_cols=187 Identities=7% Similarity=-0.025 Sum_probs=88.2
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCC-CCeEEEEEEecCeEEEEEcCCCc--eeeeccCCCceee---
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHL-DDFKVVTISVNADAEVYSLRSNS--WKNIAYGFPRSIE--- 205 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~-~~ykVv~~~~~~~~~vyss~t~~--W~~~~~~~p~~~~--- 205 (383)
++.+.|||..+++...+...........+.+.+. . +.-.++.......+.+|+..++. -.... .......
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~ 118 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGAT---SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAID 118 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTC---CTTTCCEEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCC---CCCCceEEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEe
Confidence 5678888888776554322221112244555543 2 11223333336688999988764 22222 1111111
Q ss_pred eccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCe--eeEeCCCCCCCCCCCceEEE-----EeCCeEEEEE
Q 016751 206 INRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLN-----VFDGYLCVFA 278 (383)
Q Consensus 206 ~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~~~~~~~~~l~-----~~~g~L~~v~ 278 (383)
+.... +..-+|.....+... ..|..+|+.+.. ...+..+ ..........+. .-+|.+.++.
T Consensus 119 ~~~~~---~~s~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 119 GIGGL---GIGEGAPEIVTGSRD--------GTVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp EESGG---GCC-CCCEEEEEETT--------SCEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred ecccc---ccCCCccEEEEEeCC--------CeEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 00000 112345444444333 478999998764 4444433 221111112222 1356666666
Q ss_pred ecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee---CCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 279 TIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE---RGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 279 ~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~---~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
..+ ..+.+|.++.. .......... ....+.+.. ++..++. ...++ .+..||+++++
T Consensus 187 ~~d----~~i~i~d~~~~------~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~--~~~dg-~i~i~d~~~~~ 245 (357)
T 3i2n_A 187 YDN----GDIKLFDLRNM------ALRWETNIKN-GVCSLEFDRKDISMNKLVA--TSLEG-KFHVFDMRTQH 245 (357)
T ss_dssp ETT----SEEEEEETTTT------EEEEEEECSS-CEEEEEESCSSSSCCEEEE--EESTT-EEEEEEEEEEE
T ss_pred ccC----CeEEEEECccC------ceeeecCCCC-ceEEEEcCCCCCCCCEEEE--ECCCC-eEEEEeCcCCC
Confidence 554 48999988752 1122222222 244455554 5555555 32455 37788876543
No 85
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=86.71 E-value=15 Score=31.76 Aligned_cols=206 Identities=8% Similarity=0.126 Sum_probs=95.1
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC-ceeeecc
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN-SWKNIAY 198 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~-~W~~~~~ 198 (383)
|-++.... .++.+.|||..++++..+........ ...+.+.|. ...-.++.......+.+|+.+++ .+.....
T Consensus 67 g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~---~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 67 GTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPH---EYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp CSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCG---GGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred CCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcC---CCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 55555443 67889999998876543322221111 245556553 22223443333668899998765 3321110
Q ss_pred -CCCceee---eccCccc----ceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe-CCCCCCCCCCCceEE
Q 016751 199 -GFPRSIE---INRSHIN----SSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDLSTDDADKYL 267 (383)
Q Consensus 199 -~~p~~~~---~~~~~~~----~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i-~lP~~~~~~~~~~~l 267 (383)
....... +...... .....+|.....+..+ ..|..+|+.+. .+... .+. .+.. ....+
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D--------~~v~lwd~~~~~~~~~~~~~l~-~H~~--~V~~v 210 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLESTLE-GHSD--WVRDV 210 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETT--------SCEEEEEEETTTTEEEEEEEEC-CCSS--CEEEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCC--------CcEEEEEEcCCCceEEEEEEec-CCCC--ceEEE
Confidence 1111000 1000000 0000113344433332 46777777653 34333 333 2211 11223
Q ss_pred EEeC----CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe--cCCCceeEEEEEeeCCcEEEEEEeeCCceEEEE
Q 016751 268 NVFD----GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI--EKPQRIWWPLGFTERGKIFIRGECRHGGYGLLV 341 (383)
Q Consensus 268 ~~~~----g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~ 341 (383)
.-.. +.+.+....+ ..+.||.++.. ...|...... .... ....+.+..+|.++.. ...++. +..
T Consensus 211 ~~sp~~~~~~~las~s~D----~~v~iWd~~~~--~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~las--~~~D~~-v~l 280 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQD----RTCIIWTQDNE--QGPWKKTLLKEEKFPD-VLWRASWSLSGNVLAL--SGGDNK-VTL 280 (297)
T ss_dssp EECCCCSSSEEEEEEETT----SCEEEEEESST--TSCCEEEESSSSCCSS-CEEEEEECSSSCCEEE--EETTSC-EEE
T ss_pred EECCCCCCceEEEEEECC----CcEEEEEeCCC--CCccceeeeecccCCC-cEEEEEECCCCCEEEE--EcCCCc-EEE
Confidence 3222 2444444444 59999998752 2346542210 1111 2444566677766665 424553 888
Q ss_pred EeCCC-CeEEEE
Q 016751 342 YNPHS-DTFKCI 352 (383)
Q Consensus 342 yd~~t-~~~~~v 352 (383)
++... ++|+.+
T Consensus 281 w~~~~~g~w~~~ 292 (297)
T 2pm7_B 281 WKENLEGKWEPA 292 (297)
T ss_dssp EEECTTSCEEEC
T ss_pred EEECCCCcEEec
Confidence 87763 567654
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.65 E-value=13 Score=33.01 Aligned_cols=205 Identities=9% Similarity=-0.064 Sum_probs=85.2
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccc-eeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKK-YMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~-~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
+.-+.+|-+++... .++.+.|||..+++ +.......... ....+.+.+. .. .++.......+.+|+.+++.
T Consensus 61 ~~~s~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~--~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 61 VDWAPKSNRIVTCS--QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN---ED--KFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp EEECTTTCCEEEEE--TTSSEEEC------CCCCEEECCCCSSCEEEEECCTT---SS--CCEEEESSSCEEECCC----
T ss_pred EEEeCCCCEEEEEe--CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC---CC--EEEEEecCCeEEEEEECCcc
Confidence 33455565444432 57789999998876 22221111111 1244555543 22 23333335678888887754
Q ss_pred -eeeeccCCCc--eeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCC--C-----------
Q 016751 193 -WKNIAYGFPR--SIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMP--Y----------- 256 (383)
Q Consensus 193 -W~~~~~~~p~--~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP--~----------- 256 (383)
|.... .+.. .... ..- ...-+|.+...+... ..|..||+.+.....-..| +
T Consensus 134 ~~~~~~-~~~~~h~~~v-~~~---~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 134 DWWVSK-HLKRPLRSTI-LSL---DWHPNNVLLAAGCAD--------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp -CCCCE-EECSSCCSCE-EEE---EECTTSSEEEEEESS--------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred cceeee-EeecccCCCe-EEE---EEcCCCCEEEEEeCC--------CEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 54332 1111 1000 000 111245544444333 4688888864332111000 0
Q ss_pred CCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCC
Q 016751 257 DLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG 335 (383)
Q Consensus 257 ~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~ 335 (383)
..........+.-. +|++.+....+ ..+.+|.+.... .....+..+.........+.+..+|.+++. . .+
T Consensus 201 ~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~-~~ 271 (377)
T 3dwl_C 201 EYPSGGWVHAVGFSPSGNALAYAGHD----SSVTIAYPSAPE--QPPRALITVKLSQLPLRSLLWANESAIVAA--G-YN 271 (377)
T ss_dssp CCCCSSSEEEEEECTTSSCEEEEETT----TEEC-CEECSTT--SCEEECCCEECSSSCEEEEEEEETTEEEEE--E-SS
T ss_pred cccCCceEEEEEECCCCCEEEEEeCC----CcEEEEECCCCC--CcceeeEeecCCCCceEEEEEcCCCCEEEE--E-cC
Confidence 00000011223333 35555545444 489999998632 212222233222212455667778887777 5 44
Q ss_pred ceEEEEEeCCCCeE
Q 016751 336 GYGLLVYNPHSDTF 349 (383)
Q Consensus 336 ~~~~~~yd~~t~~~ 349 (383)
.. ++.|+...+.+
T Consensus 272 ~~-~~~~~~~~~~~ 284 (377)
T 3dwl_C 272 YS-PILLQGNESGW 284 (377)
T ss_dssp SS-EEEECCCC---
T ss_pred Cc-EEEEEeCCCce
Confidence 43 66787775443
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=86.61 E-value=16 Score=32.16 Aligned_cols=199 Identities=8% Similarity=-0.045 Sum_probs=98.5
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc-eee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-WKN 195 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-W~~ 195 (383)
+.+|-+++... .++.+.+||..+++....-...... ....+.+.+. . . .++.......+.+|+.+++. |..
T Consensus 61 ~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~-~l~~~~~d~~v~i~d~~~~~~~~~ 133 (372)
T 1k8k_C 61 APDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN---E-K-KFAVGSGSRVISICYFEQENDWWV 133 (372)
T ss_dssp ETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT---S-S-EEEEEETTSSEEEEEEETTTTEEE
T ss_pred eCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC---C-C-EEEEEeCCCEEEEEEecCCCccee
Confidence 44554444432 5778999999888754432222111 2255666654 2 2 33333335678888887643 433
Q ss_pred eccC-CCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCe----------------eeEe-CCCCC
Q 016751 196 IAYG-FPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI----------------FQTV-MMPYD 257 (383)
Q Consensus 196 ~~~~-~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~----------------~~~i-~lP~~ 257 (383)
.... .+..... ..- ...-+|.....+... ..|..||+.... -..+ .++ .
T Consensus 134 ~~~~~~~~~~~i-~~~---~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 200 (372)
T 1k8k_C 134 CKHIKKPIRSTV-LSL---DWHPNSVLLAAGSCD--------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-S 200 (372)
T ss_dssp EEEECTTCCSCE-EEE---EECTTSSEEEEEETT--------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-C
T ss_pred eeeeecccCCCe-eEE---EEcCCCCEEEEEcCC--------CCEEEEEcccccccccccccccccccchhhheEecC-C
Confidence 3201 1111000 000 112245554444433 478888864211 1111 111 1
Q ss_pred CCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc
Q 016751 258 LSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG 336 (383)
Q Consensus 258 ~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~ 336 (383)
.. .....+.-. +|.+.++...+ ..+.+|.++.. ..+..+.........+.+..+|.++.. . .++
T Consensus 201 ~~--~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~--~-~d~ 265 (372)
T 1k8k_C 201 SC--GWVHGVCFSANGSRVAWVSHD----STVCLADADKK------MAVATLASETLPLLAVTFITESSLVAA--G-HDC 265 (372)
T ss_dssp CS--SCEEEEEECSSSSEEEEEETT----TEEEEEEGGGT------TEEEEEECSSCCEEEEEEEETTEEEEE--E-TTS
T ss_pred CC--CeEEEEEECCCCCEEEEEeCC----CEEEEEECCCC------ceeEEEccCCCCeEEEEEecCCCEEEE--E-eCC
Confidence 11 011223332 45555555544 48999998762 123333322212455666778887777 5 565
Q ss_pred eEEEEEeCCC--CeEEEE
Q 016751 337 YGLLVYNPHS--DTFKCI 352 (383)
Q Consensus 337 ~~~~~yd~~t--~~~~~v 352 (383)
. +..||+++ ++|..+
T Consensus 266 ~-i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 266 F-PVLFTYDSAAGKLSFG 282 (372)
T ss_dssp S-CEEEEEETTTTEEEEC
T ss_pred e-EEEEEccCcCceEEEe
Confidence 4 89999988 877654
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.53 E-value=18 Score=32.69 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=53.9
Q ss_pred cEEEEEECCCCeee-EeCCCCCCCCCCCceEEEEe-CCeEEEEE-ecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc
Q 016751 237 WLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF-DGYLCVFA-TIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR 313 (383)
Q Consensus 237 ~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~-~g~L~~v~-~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 313 (383)
..|..||+.+.+.. .+..+ .. ...+.-. +|+..++. +... ..+.+|.+.. ........+.....
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~-~~-----v~~~~~s~~~~~l~~~~g~~d---g~i~v~~~~~----~~~~~~~~~~~h~~ 350 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAG-SQ-----VTSLIWSPHSKEIMSTHGFPD---NNLSIWSYSS----SGLTKQVDIPAHDT 350 (401)
T ss_dssp CEEEEEETTTCCEEEEEECS-SC-----EEEEEECSSSSEEEEEECTTT---CEEEEEEEET----TEEEEEEEEECCSS
T ss_pred CEEEEEECCCCCEEEEEeCC-Cc-----EEEEEECCCCCeEEEEeecCC---CcEEEEecCC----ccceeEEEecCCCC
Confidence 58899998776543 23322 11 1223322 35544443 3333 5999999986 33555555543221
Q ss_pred eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 314 IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 314 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
....+.+..+|..++. ...++ .+..||+.+++..
T Consensus 351 ~v~~~~~s~dg~~l~s--~~~dg-~i~iw~~~~~~~~ 384 (401)
T 4aez_A 351 RVLYSALSPDGRILST--AASDE-NLKFWRVYDGDHV 384 (401)
T ss_dssp CCCEEEECTTSSEEEE--ECTTS-EEEEEECCC----
T ss_pred CEEEEEECCCCCEEEE--EeCCC-cEEEEECCCCccc
Confidence 2444566677877666 43455 4999999987654
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=86.31 E-value=17 Score=32.17 Aligned_cols=119 Identities=12% Similarity=0.121 Sum_probs=65.6
Q ss_pred EECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-C---CCCCCCCCCCceEEEEe-CCeEEEEEecC-CCCccEE
Q 016751 216 FLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-M---MPYDLSTDDADKYLNVF-DGYLCVFATIP-NNTFRSY 288 (383)
Q Consensus 216 ~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~---lP~~~~~~~~~~~l~~~-~g~L~~v~~~~-~~~~~~l 288 (383)
.-+|. +|...... ..|..||+.+.++..+ . .| .... ....++.. +|+..++.... . ..+
T Consensus 219 spdg~~l~v~~~~~--------~~v~v~~~~~g~~~~~~~~~~~~-~~~~--~~~~i~~spdg~~l~v~~~~~~---~~i 284 (361)
T 3scy_A 219 NSDGKFAYLINEIG--------GTVIAFRYADGMLDEIQTVAADT-VNAQ--GSGDIHLSPDGKYLYASNRLKA---DGV 284 (361)
T ss_dssp CTTSSEEEEEETTT--------CEEEEEEEETTEEEEEEEEESCS-SCCC--CEEEEEECTTSSEEEEEECSSS---CEE
T ss_pred cCCCCEEEEEcCCC--------CeEEEEEecCCceEEeEEEecCC-CCCC--CcccEEECCCCCEEEEECCCCC---CEE
Confidence 34675 55544322 4799999888776554 2 22 2111 12234443 46543343333 3 589
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCce-EEEEEeCCCCeEEEE
Q 016751 289 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGY-GLLVYNPHSDTFKCI 352 (383)
Q Consensus 289 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~yd~~t~~~~~v 352 (383)
.+|.++.. ...+..+..++... ...-+++..+|+.+++. ...+.. .++.+|+++++++.+
T Consensus 285 ~v~~~~~~--~g~~~~~~~~~~g~-~~~~~~~spdg~~l~~~-~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 285 AIFKVDET--NGTLTKVGYQLTGI-HPRNFIITPNGKYLLVA-CRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEEEECTT--TCCEEEEEEEECSS-CCCEEEECTTSCEEEEE-ETTTTEEEEEEECTTTCCEEEC
T ss_pred EEEEEcCC--CCcEEEeeEecCCC-CCceEEECCCCCEEEEE-ECCCCCEEEEEEECCCCcEeec
Confidence 99999742 24566766666521 23446677778644441 312332 345578889988776
No 90
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=85.57 E-value=18 Score=31.61 Aligned_cols=211 Identities=10% Similarity=0.000 Sum_probs=106.1
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-c----CeEEEEEcC
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-N----ADAEVYSLR 189 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~----~~~~vyss~ 189 (383)
+.-+.+|-|.+... ....++++|+.+++...+.... .....++.+++. . . ++.... . ..+.+|+..
T Consensus 50 ~~~~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~d---g-~--l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 50 LNFDRQGQLFLLDV--FEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKD---G-R--LFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp EEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTT---S-C--EEEEECTTSSSCCEEEEECTT
T ss_pred cEECCCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCC---C-c--EEEEeCCCCCCCceEEEEeCC
Confidence 33446677766543 4668999999998877653211 112256666654 3 2 222222 2 478888888
Q ss_pred CCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEE
Q 016751 190 SNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV 269 (383)
Q Consensus 190 t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~ 269 (383)
++.-+..-......... ..- .+.-+|.+|+..... ........|..+|..+.++..+.-. .. ....++.
T Consensus 121 ~~~~~~~~~~~~~~~~~-~~i---~~d~~g~l~v~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~--~~---~~~~i~~ 189 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCI-DDM---VFDSKGGFYFTDFRG--YSTNPLGGVYYVSPDFRTVTPIIQN--IS---VANGIAL 189 (333)
T ss_dssp SCSCEEEECSSSSCCCE-EEE---EECTTSCEEEEECCC--BTTBCCEEEEEECTTSCCEEEEEEE--ES---SEEEEEE
T ss_pred CCEEEEEEccCccCCcc-cce---EECCCCCEEEEeccc--cccCCCceEEEEeCCCCEEEEeecC--CC---cccceEE
Confidence 77655222011111000 000 222368777654321 0011235799999887666554211 00 1122333
Q ss_pred e-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEE-E--ecCCC-ceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 270 F-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLY-T--IEKPQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 270 ~-~g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~-~--i~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
. +|+ |++..... ..+.+|.++..+ ....... . ..... ....-+++..+|.+++. ...++ .+..||
T Consensus 190 ~~dg~~l~v~~~~~----~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~-~v~~~d 260 (333)
T 2dg1_A 190 STDEKVLWVTETTA----NRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQG-RVLVFN 260 (333)
T ss_dssp CTTSSEEEEEEGGG----TEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTT-EEEEEC
T ss_pred CCCCCEEEEEeCCC----CeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCCCCEEEE--EcCCC-EEEEEC
Confidence 3 354 66665433 367777665321 1222111 1 11111 02333556677888887 42334 499999
Q ss_pred CCCCeEEEEEE
Q 016751 344 PHSDTFKCIGV 354 (383)
Q Consensus 344 ~~t~~~~~v~~ 354 (383)
++.+..+.+..
T Consensus 261 ~~g~~~~~~~~ 271 (333)
T 2dg1_A 261 KRGYPIGQILI 271 (333)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCCEEEEEEc
Confidence 97776666654
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.52 E-value=31 Score=34.42 Aligned_cols=194 Identities=11% Similarity=0.073 Sum_probs=99.2
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC-cee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN-SWK 194 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~-~W~ 194 (383)
.-+.+|-.+.... .++.+.|||..+++....-.... .....+.+.|. + .+ ++.......+.+|+..++ ...
T Consensus 62 ~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~-~~v~~~~~s~~---~-~~-l~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 62 KFIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHP-DYIRSIAVHPT---K-PY-VLSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp EEEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSS---S-SE-EEEEETTSEEEEEEGGGTSEEE
T ss_pred EEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEecCC-CCEEEEEEeCC---C-CE-EEEEcCCCEEEEEECCCCceEE
Confidence 3344554443332 57899999998877554221111 11245556554 2 22 333333668899998775 222
Q ss_pred eeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe
Q 016751 195 NIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~ 270 (383)
..-........ ++.+ +|.....+... ..|..+|+.+..-... ..+ ... ....+.-.
T Consensus 134 ~~~~~~~~~v~--------~~~~~p~~~~~l~~~~~d--------g~v~vwd~~~~~~~~~~~~~-~~~---~v~~~~~~ 193 (814)
T 3mkq_A 134 QTFEGHEHFVM--------CVAFNPKDPSTFASGCLD--------RTVKVWSLGQSTPNFTLTTG-QER---GVNYVDYY 193 (814)
T ss_dssp EEEECCSSCEE--------EEEEETTEEEEEEEEETT--------SEEEEEETTCSSCSEEEECC-CTT---CCCEEEEC
T ss_pred EEEcCCCCcEE--------EEEEEcCCCCEEEEEeCC--------CeEEEEECCCCcceeEEecC-CCC---CEEEEEEE
Confidence 21101111111 2222 45454444433 5899999876543222 222 111 11223322
Q ss_pred ---CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 ---DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ---~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+|.+.++...+ ..+.+|.++. ......+.........+.+..+|.+++. ...++ .+..||+.++
T Consensus 194 ~~~~~~~l~~~~~d----g~i~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg-~v~vwd~~~~ 260 (814)
T 3mkq_A 194 PLPDKPYMITASDD----LTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIIS--GSEDG-TLKIWNSSTY 260 (814)
T ss_dssp CSTTCCEEEEECTT----SEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEE--EETTS-CEEEEETTTC
T ss_pred ECCCCCEEEEEeCC----CEEEEEECCC------CcEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCC-eEEEEECCCC
Confidence 46665555544 4899998764 1233334322112455666777776666 42455 3999999986
Q ss_pred eEE
Q 016751 348 TFK 350 (383)
Q Consensus 348 ~~~ 350 (383)
+..
T Consensus 261 ~~~ 263 (814)
T 3mkq_A 261 KVE 263 (814)
T ss_dssp SEE
T ss_pred cEE
Confidence 643
No 92
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=85.51 E-value=18 Score=31.60 Aligned_cols=117 Identities=14% Similarity=0.148 Sum_probs=62.4
Q ss_pred ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEecc
Q 016751 217 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKE 295 (383)
Q Consensus 217 ~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~ 295 (383)
-+|.+||..... ..|..||+.+.++..+..+ ... ....++.. +|+|++........... |++++.
T Consensus 54 ~~g~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~-~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~--i~~~d~ 119 (333)
T 2dg1_A 54 RQGQLFLLDVFE--------GNIFKINPETKEIKRPFVS-HKA---NPAAIKIHKDGRLFVCYLGDFKSTGG--IFAATE 119 (333)
T ss_dssp TTSCEEEEETTT--------CEEEEECTTTCCEEEEEEC-SSS---SEEEEEECTTSCEEEEECTTSSSCCE--EEEECT
T ss_pred CCCCEEEEECCC--------CEEEEEeCCCCcEEEEeeC-CCC---CcceEEECCCCcEEEEeCCCCCCCce--EEEEeC
Confidence 368888876543 4899999998887665322 111 12344444 57887776543111123 444443
Q ss_pred CCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeC------CceEEEEEeCCCCeEEEE
Q 016751 296 YGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH------GGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 296 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~------~~~~~~~yd~~t~~~~~v 352 (383)
.. ..-.....-.........+.+..+|.+++. ... .. .++.+|+++++++.+
T Consensus 120 ~~--~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~~~~~~~-~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 120 NG--DNLQDIIEDLSTAYCIDDMVFDSKGGFYFT--DFRGYSTNPLG-GVYYVSPDFRTVTPI 177 (333)
T ss_dssp TS--CSCEEEECSSSSCCCEEEEEECTTSCEEEE--ECCCBTTBCCE-EEEEECTTSCCEEEE
T ss_pred CC--CEEEEEEccCccCCcccceEECCCCCEEEE--eccccccCCCc-eEEEEeCCCCEEEEe
Confidence 21 111211110111112344556677888887 411 13 599999988776654
No 93
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=85.43 E-value=17 Score=31.42 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=66.7
Q ss_pred eEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEe
Q 016751 215 VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVM 293 (383)
Q Consensus 215 v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l 293 (383)
...++.+|.+.... ..+.+||..+.+- ..++.+ .. ...|+.-+++|++..+ . . .|+++
T Consensus 102 t~~g~~Ly~ltw~~--------~~v~V~D~~Tl~~~~ti~~~-~e-----GwGLt~Dg~~L~vSdG-s----~--~l~~i 160 (268)
T 3nok_A 102 ASDGERLYQLTWTE--------GLLFTWSGMPPQRERTTRYS-GE-----GWGLCYWNGKLVRSDG-G----T--MLTFH 160 (268)
T ss_dssp EECSSCEEEEESSS--------CEEEEEETTTTEEEEEEECS-SC-----CCCEEEETTEEEEECS-S----S--EEEEE
T ss_pred EEeCCEEEEEEccC--------CEEEEEECCcCcEEEEEeCC-Cc-----eeEEecCCCEEEEECC-C----C--EEEEE
Confidence 34567888887665 6899999987655 445555 22 2345666778887753 2 2 46666
Q ss_pred ccCCCCCCeEEEEEecCCCc-----eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE-EEEEe
Q 016751 294 KEYGLTESWTKLYTIEKPQR-----IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK-CIGVH 355 (383)
Q Consensus 294 ~~~~~~~~W~~~~~i~~~~~-----~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~-~v~~~ 355 (383)
+-. .. ..+.+|..... ...-+.. .+|.||.. . .....+...|++|++.. .++..
T Consensus 161 Dp~--T~--~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyan--v-w~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 161 EPD--GF--ALVGAVQVKLRGQPVELINELEC-ANGVIYAN--I-WHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp CTT--TC--CEEEEEECEETTEECCCEEEEEE-ETTEEEEE--E-TTCSEEEEECTTTCBEEEEEECH
T ss_pred cCC--CC--eEEEEEEeCCCCcccccccccEE-eCCEEEEE--E-CCCCeEEEEeCCCCcEEEEEECC
Confidence 642 12 33344443210 1122222 37788876 5 44446999999999865 55654
No 94
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.28 E-value=21 Score=32.14 Aligned_cols=204 Identities=10% Similarity=0.092 Sum_probs=95.1
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
+.+|-+++... .++.+.|||..+++....-..... ....+.+.|. + .+ ++.......+.+|+..+..-+...
T Consensus 75 sp~~~~l~s~s--~D~~v~iWd~~~~~~~~~~~~h~~-~v~~~~~s~~---g-~~-las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 75 TPEKNWIVSAS--QDGRLIVWNALTSQKTHAIKLHCP-WVMECAFAPN---G-QS-VACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp CTTSSCEEEEE--TTSEEEEEETTTTEEEEEEECCCT-TCCCCEECTT---S-SE-EEECCSSSCCEEEECCCCSSCCCS
T ss_pred cCCCCEEEEEe--CCCeEEEEECCCCccceEEecCCC-CEEEEEECCC---C-CE-EEEeeCCCcEEEEECCCCccccCC
Confidence 44554444432 677899999988765432111111 1133445543 2 22 333223567788887654322111
Q ss_pred cCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe---CCCCCCCCCCCceEEEE--e
Q 016751 198 YGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNV--F 270 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i---~lP~~~~~~~~~~~l~~--~ 270 (383)
.........+........+. ++.....+.. ...|..+|+.+..-... ..| ..... ....+.. .
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~--------D~~i~~wd~~~~~~~~~~~~~~~-~~h~~-~v~~~~~~~~ 216 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSG--------DQTCVLWDVTTGQRISIFGSEFP-SGHTA-DVLSLSINSL 216 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECT--------TSCEEEECTTTCCEEEEECCCSS-SSCCS-CEEEEEECSS
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECC--------CCcEEEEEcCCCcEEEEeecccC-CCCcc-CeEEEEeecC
Confidence 00000000011000001111 1221122222 24788899987754332 222 11111 1122322 2
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
++.+.+.+..+ ..+.+|-+..... .+..+.-.......+.+..+|..++. ...++ .+..+|+++++..
T Consensus 217 ~~~~l~sgs~D----~~v~~wd~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~-~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 217 NANMFISGSCD----TTVRLWDLRITSR-----AVRTYHGHEGDINSVKFFPDGQRFGT--GSDDG-TCRLFDMRTGHQL 284 (380)
T ss_dssp SCCEEEEEETT----SCEEEEETTTTCC-----CCEEECCCSSCCCEEEECTTSSEEEE--ECSSS-CEEEEETTTTEEE
T ss_pred CCCEEEEEECC----CeEEEEECCCCCc-----ceEEECCcCCCeEEEEEecCCCeEEE--EcCCC-eEEEEECCCCcEE
Confidence 56676666655 4899998864211 11122211112444666777877776 43455 4999999998654
Q ss_pred E
Q 016751 351 C 351 (383)
Q Consensus 351 ~ 351 (383)
.
T Consensus 285 ~ 285 (380)
T 3iz6_a 285 Q 285 (380)
T ss_dssp E
T ss_pred E
Confidence 3
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=85.23 E-value=21 Score=32.10 Aligned_cols=196 Identities=12% Similarity=0.077 Sum_probs=96.2
Q ss_pred ceEEEeecCCCCceEEEEccCccc------eeecC-CCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKK------YMTLP-RPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~------~~~LP-~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
|-+++... .++.+.+||..+++ ..... ...... ....+.+.+. .. ..++.......+.+|+.+++.
T Consensus 126 ~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~-~~l~~~~~dg~v~iwd~~~~~ 199 (416)
T 2pm9_A 126 DNVLASGG--NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS---LA-HVFASAGSSNFASIWDLKAKK 199 (416)
T ss_dssp TTBEEEEC--SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS---CT-TEEEEESSSSCEEEEETTTTE
T ss_pred CCEEEEEc--CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC---CC-cEEEEEcCCCCEEEEECCCCC
Confidence 44444432 57789999998876 22111 111111 1255666654 33 334433336679999998875
Q ss_pred eeeeccCCCceee--eccCcccceeEE--Cc-eEEEEEeeccCCCCCCCcEEEEEECCCCe--eeEeCCCCCCCCCCCce
Q 016751 193 WKNIAYGFPRSIE--INRSHINSSVFL--NG-SVHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTVMMPYDLSTDDADK 265 (383)
Q Consensus 193 W~~~~~~~p~~~~--~~~~~~~~~v~~--~G-~lYw~~~~~~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~~~~~~~~ 265 (383)
-...- ..+.... ...-. ++.+ +| .+...+... .....|..||+.+.. ...+... .. ....
T Consensus 200 ~~~~~-~~~~~~~~~~~~v~---~~~~~~~~~~~l~~~~~d-----~~~~~i~~~d~~~~~~~~~~~~~~-~~---~~v~ 266 (416)
T 2pm9_A 200 EVIHL-SYTSPNSGIKQQLS---VVEWHPKNSTRVATATGS-----DNDPSILIWDLRNANTPLQTLNQG-HQ---KGIL 266 (416)
T ss_dssp EEEEE-CCCCCSSCCCCCEE---EEEECSSCTTEEEEEECC-----SSSCCCCEEETTSTTSCSBCCCSC-CS---SCEE
T ss_pred cceEE-eccccccccCCceE---EEEECCCCCCEEEEEECC-----CCCceEEEEeCCCCCCCcEEeecC-cc---Ccee
Confidence 43222 1111000 00000 2222 33 344444332 011268889988742 1111101 11 1122
Q ss_pred EEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEE
Q 016751 266 YLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVY 342 (383)
Q Consensus 266 ~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~y 342 (383)
.+.-. +|.+.+....+ ..+.+|.++.. ..+..+.........+.+..++ .+++. ...++ .+..|
T Consensus 267 ~~~~s~~~~~~l~s~~~d----g~v~~wd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~~l~s--~~~d~-~i~iw 333 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRD----NTVLLWNPESA------EQLSQFPARGNWCFKTKFAPEAPDLFAC--ASFDN-KIEVQ 333 (416)
T ss_dssp EEEECSSCSSCEEEEESS----SEEEEECSSSC------CEEEEEECSSSCCCCEEECTTCTTEEEE--CCSSS-EEEEE
T ss_pred EEEeCCCCCCeEEEEeCC----CCEEEeeCCCC------ccceeecCCCCceEEEEECCCCCCEEEE--EecCC-cEEEE
Confidence 33333 46666666555 48999987651 2334443221124445666666 67776 43455 49999
Q ss_pred eCCCCe
Q 016751 343 NPHSDT 348 (383)
Q Consensus 343 d~~t~~ 348 (383)
|+++.+
T Consensus 334 ~~~~~~ 339 (416)
T 2pm9_A 334 TLQNLT 339 (416)
T ss_dssp ESCCCC
T ss_pred EccCCC
Confidence 998765
No 96
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.12 E-value=28 Score=33.46 Aligned_cols=189 Identities=8% Similarity=-0.012 Sum_probs=98.5
Q ss_pred CceEEEEccCccceee-cCCCCC---------CCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee---eecc
Q 016751 132 RSLIYLWNPLIKKYMT-LPRPSL---------NPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK---NIAY 198 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~-LP~~~~---------~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~---~~~~ 198 (383)
...+.|+|..|.+.+. ++.... .....++.+.+. +.+.++.......+.+++..+..-- .++.
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~----~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE----HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS----SSEEEEEETTTTEEEEEECTTSSSCEEEEEEC
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC----CCEEEEEECCCCeEEEEEecCCCcceeEEecc
Confidence 5678888888866443 332110 001134444443 3344444433567888888764311 1110
Q ss_pred -CCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCC---CCCCCCCCCceEEEEeC-C
Q 016751 199 -GFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMM---PYDLSTDDADKYLNVFD-G 272 (383)
Q Consensus 199 -~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~l---P~~~~~~~~~~~l~~~~-g 272 (383)
..|... ++.-+|...+.+... ...|.++|+.+.+... ++. | ... ....+..-+ |
T Consensus 323 ~~~~~~~---------~~spdg~~l~va~~~-------~~~v~v~D~~tg~l~~~i~~g~~p-h~g---~g~~~~~p~~g 382 (543)
T 1nir_A 323 APFLHDG---------GWDSSHRYFMTAANN-------SNKVAVIDSKDRRLSALVDVGKTP-HPG---RGANFVHPKYG 382 (543)
T ss_dssp CSSCCCE---------EECTTSCEEEEEEGG-------GTEEEEEETTTTEEEEEEECSSSB-CCT---TCEEEEETTTE
T ss_pred CcCccCc---------eECCCCCEEEEEecC-------CCeEEEEECCCCeEEEeeccCCCC-CCC---CCcccCCCCCc
Confidence 111111 223356643333321 2588899999887643 232 3 211 112232223 6
Q ss_pred eEEEEEecCCCCccEEEEEEeccCC-CCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEee---CC---ceEEEEEeCC
Q 016751 273 YLCVFATIPNNTFRSYELWVMKEYG-LTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECR---HG---GYGLLVYNPH 345 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~~~-~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~---~~---~~~~~~yd~~ 345 (383)
.+++...... .++.+|-.+..+ .+..|..+.+++...-....+.+..+|+.+.+ .. .+ .+.+.+||.+
T Consensus 383 ~~~~s~~~~d---~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v--~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 383 PVWSTSHLGD---GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV--DTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp EEEEEEBSSS---SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEE--CCTTCSSHHHHTCEEEEETT
T ss_pred cEEEeccCCC---ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEE--ecCCCCCcccCceEEEEECC
Confidence 6655544333 589999987532 23459988888864322334566777766665 31 01 1259999999
Q ss_pred CCeE
Q 016751 346 SDTF 349 (383)
Q Consensus 346 t~~~ 349 (383)
|.+.
T Consensus 458 ~~~~ 461 (543)
T 1nir_A 458 NLDA 461 (543)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 8764
No 97
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=85.08 E-value=18 Score=31.35 Aligned_cols=198 Identities=13% Similarity=0.141 Sum_probs=101.1
Q ss_pred eEEEccCce-EEEeecCCCCceEEEEccCccce-e-ecCCCCCCCCcee-EEEeccCCCCCCeEEEEEEec--C--eEEE
Q 016751 114 DVVGSCNGV-LCFCSNGSDRSLIYLWNPLIKKY-M-TLPRPSLNPRYLG-FGVNSVSGHLDDFKVVTISVN--A--DAEV 185 (383)
Q Consensus 114 ~~~~s~~Gl-l~~~~~~~~~~~~~v~NP~t~~~-~-~LP~~~~~~~~~~-~g~d~~~~~~~~ykVv~~~~~--~--~~~v 185 (383)
.+..+-+|- +..... ....++++|+.+++. . .++.... ... +.+++. +.+ ++ +... . .+.+
T Consensus 44 ~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~d----g~~-l~-~~~~~~~~~~i~v 112 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSD--FCQTLVQIETQLEPPKVVAIQEGQS---SMADVDITPD----DQF-AV-TVTGLNHPFNMQS 112 (331)
T ss_dssp EEEECSSSCEEEEEES--TTCEEEEEECSSSSCEEEEEEECSS---CCCCEEECTT----SSE-EE-ECCCSSSSCEEEE
T ss_pred eEEEcCCCCEEEEEeC--CCCeEEEEECCCCceeEEecccCCC---CccceEECCC----CCE-EE-EecCCCCcccEEE
Confidence 444555664 555542 466899999998874 2 2222111 123 566654 223 33 3322 2 8999
Q ss_pred EEcCCCceeeeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcE-EEEEECCCCe-e-eE--eCCCCCCC
Q 016751 186 YSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWL-IVSFDFAKEI-F-QT--VMMPYDLS 259 (383)
Q Consensus 186 yss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~-il~fD~~~~~-~-~~--i~lP~~~~ 259 (383)
|+..++.-...- ....... . . .+.-+|. +|...... .. +..||+.... . .. ..++ ...
T Consensus 113 ~d~~~~~~~~~~-~~~~~~~--~-~---~~spdg~~l~~~~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~-~~~ 176 (331)
T 3u4y_A 113 YSFLKNKFISTI-PIPYDAV--G-I---AISPNGNGLILIDRSS--------ANTVRRFKIDADGVLFDTGQEFIS-GGT 176 (331)
T ss_dssp EETTTTEEEEEE-ECCTTEE--E-E---EECTTSSCEEEEEETT--------TTEEEEEEECTTCCEEEEEEEEEC-SSS
T ss_pred EECCCCCeEEEE-ECCCCcc--c-e---EECCCCCEEEEEecCC--------CceEEEEEECCCCcEeecCCcccc-CCC
Confidence 999887653322 1111111 0 0 2333665 66554432 24 7777765321 1 11 1112 211
Q ss_pred CCCCceEEEEe-CCe-EEEEEecCCCCccEEEEEEeccCCCCCCe-EEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCC
Q 016751 260 TDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKEYGLTESW-TKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHG 335 (383)
Q Consensus 260 ~~~~~~~l~~~-~g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~ 335 (383)
....++.. +|+ |++..... ..+.+|.++.. +. ..+..++... ....+.+..+|+ +++. . .+
T Consensus 177 ---~~~~~~~spdg~~l~v~~~~~----~~v~v~d~~~~----~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~--~-~~ 241 (331)
T 3u4y_A 177 ---RPFNITFTPDGNFAFVANLIG----NSIGILETQNP----ENITLLNAVGTNN-LPGTIVVSRDGSTVYVL--T-ES 241 (331)
T ss_dssp ---SEEEEEECTTSSEEEEEETTT----TEEEEEECSST----TSCEEEEEEECSS-CCCCEEECTTSSEEEEE--C-SS
T ss_pred ---CccceEECCCCCEEEEEeCCC----CeEEEEECCCC----cccceeeeccCCC-CCceEEECCCCCEEEEE--E-cC
Confidence 11233333 355 55555433 58899987642 22 2244454332 233466777887 5555 3 33
Q ss_pred ceEEEEEeCCCCeEEEEE
Q 016751 336 GYGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 336 ~~~~~~yd~~t~~~~~v~ 353 (383)
...+.++|+++++.+.+.
T Consensus 242 ~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp EEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCceeeec
Confidence 336999999999986663
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=84.67 E-value=23 Score=32.14 Aligned_cols=197 Identities=13% Similarity=0.016 Sum_probs=98.1
Q ss_pred cCceEEEeecCCCCceEEEEccCccceeecCCCCC---CCCc-eeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSL---NPRY-LGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~---~~~~-~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
.+|.+++... ....+.++|+.+++.....+... .... ..+.+.+. ...++.......+.+|+.++++-.
T Consensus 132 ~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 132 DNTRLAIPLL--EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-----NELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp SSSEEEEEBT--TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-----TEEEEEEGGGTEEEEEETTTCCEE
T ss_pred CCCeEEEEeC--CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-----CEEEEEECCCCEEEEEECCCceEE
Confidence 3677766653 45679999999988776544321 1111 34455433 222333222578999999876432
Q ss_pred eeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CC
Q 016751 195 NIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 272 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g 272 (383)
..-.......... .+.-+|. +|..+... ..|..+|+.+.+.... ++ ... ....+... +|
T Consensus 205 ~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~~~~~-~~-~~~---~~~~~~~~~~g 265 (433)
T 3bws_A 205 ATVDLTGKWSKIL------LYDPIRDLVYCSNWIS--------EDISVIDRKTKLEIRK-TD-KIG---LPRGLLLSKDG 265 (433)
T ss_dssp EEEECSSSSEEEE------EEETTTTEEEEEETTT--------TEEEEEETTTTEEEEE-CC-CCS---EEEEEEECTTS
T ss_pred EEEcCCCCCeeEE------EEcCCCCEEEEEecCC--------CcEEEEECCCCcEEEE-ec-CCC---CceEEEEcCCC
Confidence 2110111111000 1222444 44444232 4899999988765332 22 111 11223333 35
Q ss_pred -eEEEEEecCCC---CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCCC
Q 016751 273 -YLCVFATIPNN---TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 273 -~L~~v~~~~~~---~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
.|++....... ....+.+|.++.. .....+.... ....+.+..+|+ +++. ...++ .+..||++++
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~------~~~~~~~~~~-~~~~~~~~~~g~~l~~~--~~~~~-~v~v~d~~~~ 335 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKE------KLIDTIGPPG-NKRHIVSGNTENKIYVS--DMCCS-KIEVYDLKEK 335 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTT------EEEEEEEEEE-CEEEEEECSSTTEEEEE--ETTTT-EEEEEETTTT
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCC------cEEeeccCCC-CcceEEECCCCCEEEEE--ecCCC-EEEEEECCCC
Confidence 44444432210 1257888887641 1222222111 133355566674 5565 42344 5999999988
Q ss_pred eEEE
Q 016751 348 TFKC 351 (383)
Q Consensus 348 ~~~~ 351 (383)
+...
T Consensus 336 ~~~~ 339 (433)
T 3bws_A 336 KVQK 339 (433)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 7543
No 99
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.55 E-value=17 Score=30.51 Aligned_cols=188 Identities=11% Similarity=0.009 Sum_probs=96.2
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC-CceeeeccCCCceeeeccC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS-NSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t-~~W~~~~~~~p~~~~~~~~ 209 (383)
....++++|+.+++...+..... ....+.+.|. + .+-++ . ....+.+++..+ +..+.+. ..+..... ..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spd---g-~~l~~-~-~~~~i~~~d~~~~~~~~~~~-~~~~~~~~-~~ 89 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPD---G-KYLLL-N-SEGLLYRLSLAGDPSPEKVD-TGFATICN-ND 89 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTT---S-SEEEE-E-ETTEEEEEESSSCCSCEECC-CTTCCCBC-SC
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCC---C-CEEEE-E-cCCeEEEEeCCCCCCceEec-cccccccc-cc
Confidence 56789999999988776644221 1245566654 3 33222 2 266899999988 7766554 22211110 10
Q ss_pred cccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCe-EEEEEecCCCCccE
Q 016751 210 HINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRS 287 (383)
Q Consensus 210 ~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~~~ 287 (383)
. ...-+|......... ......|..+|..+.....+... .. ...+.-. +|+ |++....+ ..
T Consensus 90 ~---~~spdg~~l~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~-~~-----~~~~~~spdg~~l~~~~~~~----~~ 152 (297)
T 2ojh_A 90 H---GISPDGALYAISDKV----EFGKSAIYLLPSTGGTPRLMTKN-LP-----SYWHGWSPDGKSFTYCGIRD----QV 152 (297)
T ss_dssp C---EECTTSSEEEEEECT----TTSSCEEEEEETTCCCCEECCSS-SS-----EEEEEECTTSSEEEEEEEET----TE
T ss_pred e---EECCCCCEEEEEEeC----CCCcceEEEEECCCCceEEeecC-CC-----ccceEECCCCCEEEEEECCC----Cc
Confidence 0 233356544444321 12346888899887765554333 21 1222322 354 44444444 47
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCc-eEEEEEeCCCCeEEEE
Q 016751 288 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGG-YGLLVYNPHSDTFKCI 352 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~-~~~~~yd~~t~~~~~v 352 (383)
+.||.++... .... .+.........+.+..+|. +++. ...++ ..++.++..++..+.+
T Consensus 153 ~~l~~~~~~~--~~~~---~~~~~~~~~~~~~~s~dg~~l~~~--~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 153 FDIYSMDIDS--GVET---RLTHGEGRNDGPDYSPDGRWIYFN--SSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEEEETTT--CCEE---ECCCSSSCEEEEEECTTSSEEEEE--ECTTSSCEEEEEETTSSCEEEC
T ss_pred eEEEEEECCC--Ccce---EcccCCCccccceECCCCCEEEEE--ecCCCCccEEEECCCCCCcEEE
Confidence 8999987532 2222 2221111234455556675 4444 21122 2577777777666554
No 100
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=83.76 E-value=21 Score=30.90 Aligned_cols=194 Identities=12% Similarity=0.086 Sum_probs=96.7
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
.+.+|-+++... .++.+.+||..+++... +..- ......+.+.|. . . .++.......+.+|+.+++ |..
T Consensus 63 ~~~~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~---~-~-~l~sgs~D~~v~lWd~~~~-~~~ 132 (304)
T 2ynn_A 63 FIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAH--PDYIRSIAVHPT---K-P-YVLSGSDDLTVKLWNWENN-WAL 132 (304)
T ss_dssp EEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECC--SSCEEEEEECSS---S-S-EEEEEETTSCEEEEEGGGT-TEE
T ss_pred EeCCCCEEEEEC--CCCEEEEEECCCCcEEEEEeCC--CCcEEEEEEcCC---C-C-EEEEECCCCeEEEEECCCC-cch
Confidence 344555444443 67889999998876543 2211 111245666654 2 2 2333333668888888764 211
Q ss_pred eccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-
Q 016751 196 IAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~- 270 (383)
.. ......... . ++.+ +|.+...+..+ ..|..+|+.+..-.. +... ... ....+...
T Consensus 133 ~~-~~~~h~~~v--~---~v~~~p~~~~~l~sgs~D--------~~v~iwd~~~~~~~~~~~~~-~~~---~v~~~~~~~ 194 (304)
T 2ynn_A 133 EQ-TFEGHEHFV--M---CVAFNPKDPSTFASGCLD--------RTVKVWSLGQSTPNFTLTTG-QER---GVNYVDYYP 194 (304)
T ss_dssp EE-EECCCCSCE--E---EEEECTTCTTEEEEEETT--------SEEEEEETTCSSCSEEEECC-CTT---CEEEEEECC
T ss_pred hh-hhcccCCcE--E---EEEECCCCCCEEEEEeCC--------CeEEEEECCCCCccceeccC-CcC---cEEEEEEEE
Confidence 11 010000000 0 2222 34444433333 588899986543221 1111 111 11122221
Q ss_pred --CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 --DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 --~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
++.+.+....+ ..+.+|-++. ...+..+.........+.+..++.+++. ...++ .+..+|.++.+
T Consensus 195 ~~~~~~l~s~s~D----~~i~iWd~~~------~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~s~Dg-~i~iWd~~~~~ 261 (304)
T 2ynn_A 195 LPDKPYMITASDD----LTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIIS--GSEDG-TLKIWNSSTYK 261 (304)
T ss_dssp STTCCEEEEEETT----SEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEE--EETTS-CEEEEETTTCC
T ss_pred cCCCCEEEEEcCC----CeEEEEeCCC------CccceeeCCCCCCEEEEEECCCCCEEEE--EcCCC-eEEEEECCCCc
Confidence 34444444444 5999998864 1334444432213455666777777776 43455 49999999987
Q ss_pred EEE
Q 016751 349 FKC 351 (383)
Q Consensus 349 ~~~ 351 (383)
...
T Consensus 262 ~~~ 264 (304)
T 2ynn_A 262 VEK 264 (304)
T ss_dssp EEE
T ss_pred eee
Confidence 654
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=83.76 E-value=23 Score=31.49 Aligned_cols=192 Identities=8% Similarity=0.007 Sum_probs=88.2
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc--eeeecc-------CCC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS--WKNIAY-------GFP 201 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~--W~~~~~-------~~p 201 (383)
.++.+.++|..+++....-... ......+.+.|. +.+.++.......+.+|+.+++. ...... ...
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~----~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGH-RQEILAVSWSPR----YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVE 238 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCC-CSCEEEEEECSS----CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTT
T ss_pred CCCeEEEEeCCCcceeeeecCC-CCcEEEEEECCC----CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeec
Confidence 3556777777665433211111 011245666654 33434444436688999997653 222110 000
Q ss_pred ceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCC--CCCCCCCceEEEEeCCeEEEE
Q 016751 202 RSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPY--DLSTDDADKYLNVFDGYLCVF 277 (383)
Q Consensus 202 ~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~--~~~~~~~~~~l~~~~g~L~~v 277 (383)
.....+... -.++.+ +|.....+... ..|..||+.+..-....... ...............+...++
T Consensus 239 ~~~~~~~~~-v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T 4a11_B 239 SANTAHNGK-VNGLCFTSDGLHLLTVGTD--------NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF 309 (408)
T ss_dssp TSSCSCSSC-EEEEEECTTSSEEEEEETT--------SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE
T ss_pred cccccccCc-eeEEEEcCCCCEEEEecCC--------CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE
Confidence 000000000 002222 55544444433 47999999876543321110 000111112222222333333
Q ss_pred EecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 278 ATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 278 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
...+ ..+.+|.+.. ...+..+.........+++..+|.+++. ...++ .+..||+++.+.
T Consensus 310 ~~~~----~~i~v~d~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg-~i~iw~~~~~~~ 368 (408)
T 4a11_B 310 VPYG----STIAVYTVYS------GEQITMLKGHYKTVDCCVFQSNFQELYS--GSRDC-NILAWVPSLYEP 368 (408)
T ss_dssp EEET----TEEEEEETTT------CCEEEEECCCSSCEEEEEEETTTTEEEE--EETTS-CEEEEEECC---
T ss_pred EecC----CEEEEEECcC------CcceeeeccCCCeEEEEEEcCCCCEEEE--ECCCC-eEEEEeCCCCCc
Confidence 3333 4888998865 1233444322213555677778877776 43455 499999998764
No 102
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=83.31 E-value=23 Score=31.16 Aligned_cols=194 Identities=10% Similarity=0.080 Sum_probs=97.3
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc--ee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS--WK 194 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~--W~ 194 (383)
-+.+|-+++... .++.+.|||..+++....-+... .....+.+.|. + . .++.......+.+|+..++. .+
T Consensus 63 ~s~d~~~l~s~s--~Dg~v~iWd~~~~~~~~~~~~~~-~~v~~~~~s~~---~-~-~l~s~~~d~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 63 WGTDSRLLLSAS--QDGKLIIWDSYTTNKVHAIPLRS-SWVMTCAYAPS---G-N-YVACGGLDNICSIYNLKTREGNVR 134 (340)
T ss_dssp ECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECSS-SCEEEEEECTT---S-S-EEEEEETTCEEEEEETTTCSBSCE
T ss_pred ECCCCCEEEEEe--CCCcEEEEECCCCCcceEeecCC-ccEEEEEECCC---C-C-EEEEEeCCCeEEEEECccCCCcce
Confidence 345565555543 67889999988766443211111 11244555554 2 2 23333336688999987643 22
Q ss_pred eeccCCCceeeeccCcccce-eEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CC
Q 016751 195 NIAYGFPRSIEINRSHINSS-VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG 272 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~-v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g 272 (383)
... ... .+.....+. ..-+|.+.- +.. ...|..+|+.+..-... +. .+.. ....+... +|
T Consensus 135 ~~~-~~~----~h~~~v~~~~~~~~~~l~s-~s~--------d~~i~~wd~~~~~~~~~-~~-~h~~--~v~~~~~~~~~ 196 (340)
T 1got_B 135 VSR-ELA----GHTGYLSCCRFLDDNQIVT-SSG--------DTTCALWDIETGQQTTT-FT-GHTG--DVMSLSLAPDT 196 (340)
T ss_dssp EEE-EEE----CCSSCEEEEEEEETTEEEE-EET--------TSCEEEEETTTTEEEEE-EC-CCSS--CEEEEEECTTS
T ss_pred eEE-Eec----CCCccEEEEEECCCCcEEE-EEC--------CCcEEEEECCCCcEEEE-Ec-CCCC--ceEEEEECCCC
Confidence 111 110 000000001 122444332 222 24788999987764332 11 1110 12233333 35
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 273 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
++.+.+..+ ..+.+|.+... .....+.........+++..+|..++. ...++ .+..||+++++.
T Consensus 197 ~~l~sg~~d----~~v~~wd~~~~------~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~d~-~v~iwd~~~~~~ 260 (340)
T 1got_B 197 RLFVSGACD----ASAKLWDVREG------MCRQTFTGHESDINAICFFPNGNAFAT--GSDDA-TCRLFDLRADQE 260 (340)
T ss_dssp SEEEEEETT----SCEEEEETTTC------SEEEEECCCSSCEEEEEECTTSSEEEE--EETTS-CEEEEETTTTEE
T ss_pred CEEEEEeCC----CcEEEEECCCC------eeEEEEcCCcCCEEEEEEcCCCCEEEE--EcCCC-cEEEEECCCCcE
Confidence 665555555 48999988652 222333322113555667777777776 43455 489999988754
No 103
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.85 E-value=28 Score=31.71 Aligned_cols=190 Identities=9% Similarity=-0.019 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeecc
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAY 198 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~ 198 (383)
.+.|++.. ...+...++..++...+-+.. ....++.+|+. .+ +++.... ...+..++..+...+.+.
T Consensus 87 ~~~l~~~~----~~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~---~~--~ly~~D~~~~~I~r~~~~g~~~~~~~- 154 (386)
T 3v65_B 87 EPVLLFAN----RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR---RE--LVFWSDVTLDRILRANLNGSNVEEVV- 154 (386)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCCEEEECSC--SCEEEEEEETT---TT--EEEEEETTTTEEEEEETTSCCEEEEE-
T ss_pred cceeEeec----CccceeeccCCCcEEEEecCC--CccEEEEEecC---CC--eEEEEeCCCCcEEEEecCCCCcEEEE-
Confidence 34455443 345667777665544432211 12367778865 33 3333332 456777887776555443
Q ss_pred CCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCe
Q 016751 199 GFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGY 273 (383)
Q Consensus 199 ~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~ 273 (383)
..... ... ++.+ +|.|||..... ..|..+|+....-..+. . .... ....+++. +|.
T Consensus 155 ~~~~~----~p~---glavd~~~g~lY~~d~~~--------~~I~~~~~dg~~~~~l~-~-~~l~--~P~giavdp~~g~ 215 (386)
T 3v65_B 155 STGLE----SPG---GLAVDWVHDKLYWTDSGT--------SRIEVANLDGAHRKVLL-W-QSLE--KPRAIALHPMEGT 215 (386)
T ss_dssp CSSCS----CCC---CEEEETTTTEEEEEETTT--------TEEEECBTTSCSCEEEE-C-SSCS--CEEEEEEETTTTE
T ss_pred eCCCC----Ccc---EEEEEeCCCeEEEEcCCC--------CeEEEEeCCCCceEEee-c-CCCC--CCcEEEEEcCCCe
Confidence 11110 111 3333 68999987654 58999998765433331 1 1111 12334554 578
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
||+..... .-.|++.+..+. .. ..+..-.+. ...-+++. .++.||+. ..... .+..+|+.....+.+
T Consensus 216 ly~td~~~-----~~~I~r~~~dG~-~~-~~~~~~~~~--~PnGlavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 216 IYWTDWGN-----TPRIEASSMDGS-GR-RIIADTHLF--WPNGLTIDYAGRRMYWV--DAKHH-VIERANLDGSHRKAV 283 (386)
T ss_dssp EEEEECSS-----SCEEEEEETTSC-SC-EEEECSSCS--CEEEEEEEGGGTEEEEE--ETTTT-EEEEECTTSCSCEEE
T ss_pred EEEeccCC-----CCEEEEEeCCCC-Cc-EEEEECCCC--CeeeEEEeCCCCEEEEE--ECCCC-EEEEEeCCCCeeEEE
Confidence 88876433 235666654332 11 111111111 12234444 45678887 42233 588898876544433
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.35 E-value=30 Score=31.80 Aligned_cols=99 Identities=3% Similarity=-0.071 Sum_probs=51.5
Q ss_pred cEEEEEECCCCeeeE--eCCCCCCCCCCCceEEEEe-C---CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC
Q 016751 237 WLIVSFDFAKEIFQT--VMMPYDLSTDDADKYLNVF-D---GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK 310 (383)
Q Consensus 237 ~~il~fD~~~~~~~~--i~lP~~~~~~~~~~~l~~~-~---g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 310 (383)
..+..+|+.+..... +... ..... ....+.-. + |++.+....+ ..+.+|.+... .-........
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~-~~h~~-~v~~~~~sp~~~~~~~l~s~~~d----~~i~vwd~~~~----~~~~~~~~~h 240 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPI-LGHVS-MLTDVHLIKDSDGHQFIITSDRD----EHIKISHYPQC----FIVDKWLFGH 240 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCS-EECSS-CEEEEEEEECTTSCEEEEEEETT----SCEEEEEESCT----TCEEEECCCC
T ss_pred CcEEEEecCCcccccccceee-ecccC-ceEEEEEcCCCCCCcEEEEEcCC----CcEEEEECCCC----ceeeeeecCC
Confidence 478888887654331 1010 10010 11223322 3 5555555544 58999998752 1121111112
Q ss_pred CCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 311 PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 311 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
.. ....+++. +|..++. ...++ .+.+||+++++..
T Consensus 241 ~~-~v~~~~~s-d~~~l~s--~~~d~-~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 241 KH-FVSSICCG-KDYLLLS--AGGDD-KIFAWDWKTGKNL 275 (450)
T ss_dssp SS-CEEEEEEC-STTEEEE--EESSS-EEEEEETTTCCEE
T ss_pred CC-ceEEEEEC-CCCEEEE--EeCCC-eEEEEECCCCcEe
Confidence 11 34556666 7777766 43455 4999999998743
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.97 E-value=24 Score=30.26 Aligned_cols=202 Identities=12% Similarity=0.107 Sum_probs=103.6
Q ss_pred EEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeeccCCC
Q 016751 123 LCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAYGFP 201 (383)
Q Consensus 123 l~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~~~p 201 (383)
|+..+. ....++++||.++ ...+..+.. ...++.+++. +. ++.... ...+.+|+..+++.+.+. ...
T Consensus 42 l~~~~~--~~~~i~~~~~~~~-~~~~~~~~~--~~~~l~~~~d---g~---l~v~~~~~~~i~~~d~~~g~~~~~~-~~~ 109 (296)
T 3e5z_A 42 VIFSDV--RQNRTWAWSDDGQ-LSPEMHPSH--HQNGHCLNKQ---GH---LIACSHGLRRLERQREPGGEWESIA-DSF 109 (296)
T ss_dssp EEEEEG--GGTEEEEEETTSC-EEEEESSCS--SEEEEEECTT---CC---EEEEETTTTEEEEECSTTCCEEEEE-CEE
T ss_pred EEEEeC--CCCEEEEEECCCC-eEEEECCCC--CcceeeECCC---Cc---EEEEecCCCeEEEEcCCCCcEEEEe-ecc
Confidence 444442 4678999999988 555543221 1256677764 32 222222 467899999888877654 211
Q ss_pred ceeeeccCcccceeEECceEEEEEeeccC---------CCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-C
Q 016751 202 RSIEINRSHINSSVFLNGSVHWCARFSCY---------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-D 271 (383)
Q Consensus 202 ~~~~~~~~~~~~~v~~~G~lYw~~~~~~~---------~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~ 271 (383)
......... ...+.-+|.+|+....... ........|..+|.. .+...+.-. .. ....++.. +
T Consensus 110 ~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~--~~~gi~~s~d 182 (296)
T 3e5z_A 110 EGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RV--KPNGLAFLPS 182 (296)
T ss_dssp TTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CS--SEEEEEECTT
T ss_pred CCCCCCCCC-CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CC--CCccEEECCC
Confidence 111111111 0023346888775321000 000112489999987 555544211 10 11234433 4
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCe-EEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESW-TKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
|++. +..... ..+.+|.++.. ... .....+........-+++..+|.+++. . +. .+..||++.+.+.
T Consensus 183 g~~l-v~~~~~---~~i~~~~~~~~---g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~--~~-~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 183 GNLL-VSDTGD---NATHRYCLNAR---GETEYQGVHFTVEPGKTDGLRVDAGGLIWAS--A--GD-GVHVLTPDGDELG 250 (296)
T ss_dssp SCEE-EEETTT---TEEEEEEECSS---SCEEEEEEEECCSSSCCCSEEEBTTSCEEEE--E--TT-EEEEECTTSCEEE
T ss_pred CCEE-EEeCCC---CeEEEEEECCC---CcCcCCCeEeeCCCCCCCeEEECCCCCEEEE--c--CC-eEEEECCCCCEEE
Confidence 6665 444333 47777777632 334 222222111101233566778899888 4 44 3999999977777
Q ss_pred EEEEe
Q 016751 351 CIGVH 355 (383)
Q Consensus 351 ~v~~~ 355 (383)
.+...
T Consensus 251 ~~~~~ 255 (296)
T 3e5z_A 251 RVLTP 255 (296)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 66543
No 106
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.90 E-value=47 Score=33.69 Aligned_cols=157 Identities=13% Similarity=0.069 Sum_probs=84.2
Q ss_pred eeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCC
Q 016751 158 LGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDN 233 (383)
Q Consensus 158 ~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~ 233 (383)
.++.+|.. ++ +|++... ...++++++....-+.+. ..... ... ++.+ +|.|||.....
T Consensus 474 ~GLAvD~~---~~--~LY~tD~~~~~I~v~~ldG~~~~~l~-~~~l~----~P~---gIaVDp~~g~LYwtD~g~----- 535 (791)
T 3m0c_C 474 DGLAVDWI---HS--NIYWTDSVLGTVSVADTKGVKRKTLF-RENGS----KPR---AIVVDPVHGFMYWTDWGT----- 535 (791)
T ss_dssp CEEEEETT---TT--EEEEEETTTTEEEEEETTSSSEEEEE-ECTTC----CEE---EEEEETTTTEEEEEECSS-----
T ss_pred ceeeeeec---CC--cEEEEecCCCeEEEEeCCCCeEEEEE-eCCCC----Ccc---eEEEecCCCCEEEecCCC-----
Confidence 56777765 43 3443333 557888888765554443 11110 111 4555 58999987532
Q ss_pred CCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 016751 234 SCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 311 (383)
Q Consensus 234 ~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 311 (383)
...|..+++....-..+.- .... .-..|+.. +|+||++..... .||+.+-.+. .....+ .-..
T Consensus 536 --~~~I~~~~~dG~~~~~lv~--~~l~--~P~GLavD~~~~~LYwaD~~~~------~I~~~d~dG~-~~~~v~-~~~~- 600 (791)
T 3m0c_C 536 --PAKIKKGGLNGVDIYSLVT--ENIQ--WPNGITLDLLSGRLYWVDSKLH------SISSIDVNGG-NRKTIL-EDEK- 600 (791)
T ss_dssp --SCEEEEEETTSCCEEEEEC--SSCS--CEEEEEEETTTTEEEEEETTTT------EEEEEETTSC-SCEEEE-ECTT-
T ss_pred --CCeEEEEecCCCceEEEEe--CCCC--CceEEEEecCCCeEEEEeCCCC------cEEEEecCCC-ceEEEe-cCCC-
Confidence 2489999997655444311 1110 12335544 689999875432 5666654332 222222 1111
Q ss_pred CceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 312 QRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 312 ~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
. ...|++++ .++.||+. . .....|..+|..+++-..
T Consensus 601 ~-l~~P~glav~~~~lYwt--D-~~~~~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 601 R-LAHPFSLAVFEDKVFWT--D-IINEAIFSANRLTGSDVN 637 (791)
T ss_dssp T-TSSEEEEEEETTEEEEE--E-TTTTEEEEEETTTCCCCE
T ss_pred c-cCCCCEEEEeCCEEEEE--E-CCCCEEEEEeCCCCcceE
Confidence 1 23455554 35578887 5 332359999988775433
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=81.71 E-value=29 Score=31.20 Aligned_cols=207 Identities=8% Similarity=-0.029 Sum_probs=103.1
Q ss_pred EccCc-eEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 117 GSCNG-VLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 117 ~s~~G-ll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
-+.+| .+++... .++.+.|||..+++... +...........+.+.+. +. .++.......+.+|+.+++.-.
T Consensus 139 ~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~--~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 139 WHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD---GA--LICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp ECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT---SS--CEEEEETTSEEEEEETTTTEEE
T ss_pred ECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC---CC--EEEEEecCCcEEEEeCCCCcee
Confidence 34444 3443332 57789999998876553 321111122255666654 22 2333333668999999886432
Q ss_pred eeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee--eEeCCCCCCCCCCCceEEEEe-C
Q 016751 195 NIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF--QTVMMPYDLSTDDADKYLNVF-D 271 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~--~~i~lP~~~~~~~~~~~l~~~-~ 271 (383)
..-......... ... ...-+|.+...+.. ......|..||+.+..- ....++ ... ....+.-. +
T Consensus 212 ~~~~~~~~~~~~-~~~---~~~~~~~~l~~g~~-----~~~d~~i~iwd~~~~~~~~~~~~~~-~~~---~v~~~~~s~~ 278 (402)
T 2aq5_A 212 AEKDRPHEGTRP-VHA---VFVSEGKILTTGFS-----RMSERQVALWDTKHLEEPLSLQELD-TSS---GVLLPFFDPD 278 (402)
T ss_dssp EEEECSSCSSSC-CEE---EECSTTEEEEEEEC-----TTCCEEEEEEETTBCSSCSEEEECC-CCS---SCEEEEEETT
T ss_pred eeeccCCCCCcc-eEE---EEcCCCcEEEEecc-----CCCCceEEEEcCccccCCceEEecc-CCC---ceeEEEEcCC
Confidence 111000000000 000 12235665554411 01235899999986432 222333 211 12233333 3
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCe-EEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESW-TKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
|+..++.+..+ ..+.+|.++.. ..+ .......... ....+++..++.+++. .++ .+..|++.+++.+
T Consensus 279 ~~~l~~~g~~d---g~i~i~d~~~~---~~~~~~l~~~~~~~-~v~~~~~sp~~~~~~s----~~~-~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 279 TNIVYLCGKGD---SSIRYFEITSE---APFLHYLSMFSSKE-SQRGMGYMPKRGLEVN----KCE-IARFYKLHERKCE 346 (402)
T ss_dssp TTEEEEEETTC---SCEEEEEECSS---TTCEEEEEEECCSS-CCSEEEECCGGGSCGG----GTE-EEEEEEEETTEEE
T ss_pred CCEEEEEEcCC---CeEEEEEecCC---CcceEeecccccCC-cccceEEeccccccee----cce-eEEEEEcCCCcEE
Confidence 55544444333 58999999863 222 2233333211 2444566666665544 344 4889999999888
Q ss_pred EEEEe
Q 016751 351 CIGVH 355 (383)
Q Consensus 351 ~v~~~ 355 (383)
.+.+.
T Consensus 347 ~i~~~ 351 (402)
T 2aq5_A 347 PIAMT 351 (402)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77543
No 108
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.62 E-value=26 Score=30.51 Aligned_cols=198 Identities=10% Similarity=0.033 Sum_probs=96.6
Q ss_pred CceEEEeecCCCCceEEEEccCccc--eeecCCCCCCC--CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKK--YMTLPRPSLNP--RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~--~~~LP~~~~~~--~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
+|-.++... .++.+.+||..+++ ...+....... ....+.+.+.-. .+.-.++.......+.+|+.+++.=..
T Consensus 128 ~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~ 204 (357)
T 3i2n_A 128 GAPEIVTGS--RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN-QEERVVCAGYDNGDIKLFDLRNMALRW 204 (357)
T ss_dssp CCCEEEEEE--TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEE
T ss_pred CccEEEEEe--CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC-CCCCEEEEEccCCeEEEEECccCceee
Confidence 444444432 57789999988865 33343322211 223344322100 112233333335689999998875322
Q ss_pred eccCCCceeeeccCcccceeEE-----CceEEEEEeeccCCCCCCCcEEEEEECCCCeee----EeCCCCCCCCCCCceE
Q 016751 196 IAYGFPRSIEINRSHINSSVFL-----NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ----TVMMPYDLSTDDADKY 266 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~-----~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~----~i~lP~~~~~~~~~~~ 266 (383)
.. ....... ++.+ +|.....+... ..|..||+.+..-. ...+. ... .....
T Consensus 205 ~~-~~~~~v~--------~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~-~~~--~~v~~ 264 (357)
T 3i2n_A 205 ET-NIKNGVC--------SLEFDRKDISMNKLVATSLE--------GKFHVFDMRTQHPTKGFASVSEK-AHK--STVWQ 264 (357)
T ss_dssp EE-ECSSCEE--------EEEESCSSSSCCEEEEEEST--------TEEEEEEEEEEETTTEEEEEEEE-CCS--SCEEE
T ss_pred ec-CCCCceE--------EEEcCCCCCCCCEEEEECCC--------CeEEEEeCcCCCcccceeeeccC-CCc--CCEEE
Confidence 22 1111111 2222 45555555443 47888888754321 11111 111 11223
Q ss_pred EEEeC-Ce-EEEEEecCCCCccEEEEEEeccCCC-------------CCCeEEEEEecCCCceeEEEEEeeCCcEEE-EE
Q 016751 267 LNVFD-GY-LCVFATIPNNTFRSYELWVMKEYGL-------------TESWTKLYTIEKPQRIWWPLGFTERGKIFI-RG 330 (383)
Q Consensus 267 l~~~~-g~-L~~v~~~~~~~~~~l~iW~l~~~~~-------------~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~ 330 (383)
+.-.. |. +.+....+ ..+.+|.++.... ...+..+..+.........+.+..+|..++ .
T Consensus 265 ~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s- 339 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGA----GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC- 339 (357)
T ss_dssp EEEETTEEEEEEEEETT----SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE-
T ss_pred EEECCCCCcEEEEEeCC----CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE-
Confidence 44443 55 44444444 5999999975321 123455555553322345566667775554 4
Q ss_pred EeeCCceEEEEEeCCCC
Q 016751 331 ECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 331 ~~~~~~~~~~~yd~~t~ 347 (383)
...++ .+.+||+.+.
T Consensus 340 -~~~d~-~i~iw~~~~~ 354 (357)
T 3i2n_A 340 -SSFDQ-TVRVLIVTKL 354 (357)
T ss_dssp -EETTS-EEEEEEECC-
T ss_pred -ecCCC-cEEEEECCCc
Confidence 32455 4999998764
No 109
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=81.27 E-value=28 Score=30.63 Aligned_cols=205 Identities=9% Similarity=-0.028 Sum_probs=100.5
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
...+|.+++.+. ....++++||.+++...++.+. ...++.+++. + .+ ++. . ...+.+|+..+++.+.+
T Consensus 57 ~~~~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~~~---~v~~i~~~~d---g-~l-~v~-~-~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 57 DPASGTAWWFNI--LERELHELHLASGRKTVHALPF---MGSALAKISD---S-KQ-LIA-S-DDGLFLRDTATGVLTLH 124 (326)
T ss_dssp ETTTTEEEEEEG--GGTEEEEEETTTTEEEEEECSS---CEEEEEEEET---T-EE-EEE-E-TTEEEEEETTTCCEEEE
T ss_pred eCCCCEEEEEEC--CCCEEEEEECCCCcEEEEECCC---cceEEEEeCC---C-eE-EEE-E-CCCEEEEECCCCcEEEE
Confidence 344566655553 4568999999988766553321 2245566654 2 22 222 2 45688999988888766
Q ss_pred ccCCCcee--eeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CC-
Q 016751 197 AYGFPRSI--EINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG- 272 (383)
Q Consensus 197 ~~~~p~~~--~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g- 272 (383)
. ..+... .....- .+.-+|.+|+..... ........|..+| +.+...+.-. .. ....++.. +|
T Consensus 125 ~-~~~~~~~~~~~~~i---~~d~~G~l~v~~~~~--~~~~~~~~l~~~~--~g~~~~~~~~--~~---~~~~i~~s~dg~ 191 (326)
T 2ghs_A 125 A-ELESDLPGNRSNDG---RMHPSGALWIGTMGR--KAETGAGSIYHVA--KGKVTKLFAD--IS---IPNSICFSPDGT 191 (326)
T ss_dssp E-CSSTTCTTEEEEEE---EECTTSCEEEEEEET--TCCTTCEEEEEEE--TTEEEEEEEE--ES---SEEEEEECTTSC
T ss_pred e-eCCCCCCCCCCCCE---EECCCCCEEEEeCCC--cCCCCceEEEEEe--CCcEEEeeCC--Cc---ccCCeEEcCCCC
Confidence 4 322110 000100 233368876543321 0011235799999 4665543111 00 11223333 35
Q ss_pred eEEEEEecCCCCccEEEEEEec-cCC-C-CCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 273 YLCVFATIPNNTFRSYELWVMK-EYG-L-TESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~-~~~-~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
.|++..... ..+.+|.++ +.+ . ... .....+........-+.+..+|.+++. ...++ .+..||++.+..
T Consensus 192 ~lyv~~~~~----~~I~~~d~~~~~Gl~~~~~-~~~~~~~~~~~~p~gi~~d~~G~lwva--~~~~~-~v~~~d~~g~~~ 263 (326)
T 2ghs_A 192 TGYFVDTKV----NRLMRVPLDARTGLPTGKA-EVFIDSTGIKGGMDGSVCDAEGHIWNA--RWGEG-AVDRYDTDGNHI 263 (326)
T ss_dssp EEEEEETTT----CEEEEEEBCTTTCCBSSCC-EEEEECTTSSSEEEEEEECTTSCEEEE--EETTT-EEEEECTTCCEE
T ss_pred EEEEEECCC----CEEEEEEcccccCCcccCc-eEEEECCCCCCCCCeeEECCCCCEEEE--EeCCC-EEEEECCCCCEE
Confidence 466654332 355555543 111 0 000 111222211112233445567888887 42234 499999976666
Q ss_pred EEEEE
Q 016751 350 KCIGV 354 (383)
Q Consensus 350 ~~v~~ 354 (383)
+.+..
T Consensus 264 ~~i~~ 268 (326)
T 2ghs_A 264 ARYEV 268 (326)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66644
No 110
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.98 E-value=29 Score=30.64 Aligned_cols=145 Identities=12% Similarity=0.196 Sum_probs=76.5
Q ss_pred cCeEEEEEcCCCceeeecc---CCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCC
Q 016751 180 NADAEVYSLRSNSWKNIAY---GFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMP 255 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~---~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP 255 (383)
...+.+|+..++.|..... ......... ...-+|.....+..+ ..+..+|..++.+..+ .+.
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~------~~sp~g~~l~s~s~D--------~~v~iw~~~~~~~~~~~~~~ 102 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQRTVRKV------AWSPCGNYLASASFD--------ATTCIWKKNQDDFECVTTLE 102 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCSSCEEEE------EECTTSSEEEEEETT--------SCEEEEEECCC-EEEEEEEC
T ss_pred CCeEEEEEcCCCcceeeeeeccccCCcEEEE------EECCCCCEEEEEECC--------CcEEEEEccCCCeEEEEEcc
Confidence 5678999998888753320 011111100 111245544443332 4677888887766544 333
Q ss_pred CCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeC
Q 016751 256 YDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH 334 (383)
Q Consensus 256 ~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~ 334 (383)
.+.. ....+.-. +|++.+....+ ..+.+|.++.. ..+..+..+.........+.+..++.+++. ...
T Consensus 103 -~h~~--~v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~s~ 170 (345)
T 3fm0_A 103 -GHEN--EVKSVAWAPSGNLLATCSRD----KSVWVWEVDEE---DEYECVSVLNSHTQDVKHVVWHPSQELLAS--ASY 170 (345)
T ss_dssp -CCSS--CEEEEEECTTSSEEEEEETT----SCEEEEEECTT---SCEEEEEEECCCCSCEEEEEECSSSSCEEE--EET
T ss_pred -CCCC--CceEEEEeCCCCEEEEEECC----CeEEEEECCCC---CCeEEEEEecCcCCCeEEEEECCCCCEEEE--EeC
Confidence 2211 12233333 36665555555 48999999752 334544444432212445566667766665 324
Q ss_pred CceEEEEEeCCCCeEEE
Q 016751 335 GGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 335 ~~~~~~~yd~~t~~~~~ 351 (383)
++ .+..||.+++++..
T Consensus 171 d~-~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 171 DD-TVKLYREEEDDWVC 186 (345)
T ss_dssp TS-CEEEEEEETTEEEE
T ss_pred CC-cEEEEEecCCCEEE
Confidence 55 38888888877654
No 111
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=80.89 E-value=31 Score=30.85 Aligned_cols=195 Identities=9% Similarity=0.043 Sum_probs=96.2
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
.-+.+|-+++... .++.+.++|...+....+.... .....+.+.+. . . .++.......+.+|+..++.-..
T Consensus 115 ~~s~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~---~-~-~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 115 AWSHDGNSIVTGV--ENGELRLWNKTGALLNVLNFHR--APIVSVKWNKD---G-T-HIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEETTSCEEEEECCCC--SCEEEEEECTT---S-S-EEEEEETTCCEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEe--CCCeEEEEeCCCCeeeeccCCC--ccEEEEEECCC---C-C-EEEEEecCCeEEEEECCCCcEEE
Confidence 3445565444432 5678999994444444444221 11245566553 2 2 33333336688999998775432
Q ss_pred eccCCCceeee-------------ccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCC
Q 016751 196 IAYGFPRSIEI-------------NRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTD 261 (383)
Q Consensus 196 ~~~~~p~~~~~-------------~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~ 261 (383)
.- ..+..... .... ...-+|.+ ..+... ..|..||+.+..... +... . .
T Consensus 186 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~--------g~i~~~d~~~~~~~~~~~~~-~-~-- 248 (425)
T 1r5m_A 186 HF-ELKETGGSSINAENHSGDGSLGVDV---EWVDDDKF-VIPGPK--------GAIFVYQITEKTPTGKLIGH-H-G-- 248 (425)
T ss_dssp EE-CCC---------------CCCBSCC---EEEETTEE-EEECGG--------GCEEEEETTCSSCSEEECCC-S-S--
T ss_pred Ee-eccccCccceeeccccCCcceeeEE---EEcCCCEE-EEEcCC--------CeEEEEEcCCCceeeeeccC-C-C--
Confidence 22 11111000 1110 22334443 333333 479999998764422 2211 1 1
Q ss_pred CCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEE
Q 016751 262 DADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLL 340 (383)
Q Consensus 262 ~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 340 (383)
....+... +|++.++...+ ..+.+|.+.... ....+.........+.+..++ .++. ...++ .+.
T Consensus 249 -~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~------~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~d~-~i~ 313 (425)
T 1r5m_A 249 -PISVLEFNDTNKLLLSASDD----GTLRIWHGGNGN------SQNCFYGHSQSIVSASWVGDD-KVIS--CSMDG-SVR 313 (425)
T ss_dssp -CEEEEEEETTTTEEEEEETT----SCEEEECSSSBS------CSEEECCCSSCEEEEEEETTT-EEEE--EETTS-EEE
T ss_pred -ceEEEEECCCCCEEEEEcCC----CEEEEEECCCCc------cceEecCCCccEEEEEECCCC-EEEE--EeCCC-cEE
Confidence 12233433 45555555544 489999887521 112222111124455666667 4444 32455 499
Q ss_pred EEeCCCCeEEE
Q 016751 341 VYNPHSDTFKC 351 (383)
Q Consensus 341 ~yd~~t~~~~~ 351 (383)
.||+++++...
T Consensus 314 i~d~~~~~~~~ 324 (425)
T 1r5m_A 314 LWSLKQNTLLA 324 (425)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCcEeE
Confidence 99999887543
No 112
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=80.89 E-value=33 Score=31.22 Aligned_cols=196 Identities=11% Similarity=0.107 Sum_probs=96.1
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee-e
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK-N 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~-~ 195 (383)
-+.+|-+++... .++.+.|||..+.+....-... ......+.+.|. + + .++.......+.+|+.+++.-. .
T Consensus 158 ~~~~~~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h-~~~V~~v~~~p~---~-~-~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 158 FDHSGKLLASCS--ADMTIKLWDFQGFECIRTMHGH-DHNVSSVSIMPN---G-D-HIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp ECTTSSEEEEEE--TTSCCCEEETTSSCEEECCCCC-SSCEEEEEECSS---S-S-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEe--CCCeEEEEeCCCCceeEEEcCC-CCCEEEEEEeCC---C-C-EEEEEeCCCeEEEEECCCCcEEEE
Confidence 345565555443 5778889998876654321111 111255666654 2 2 3343333678899999886432 1
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCC-------C------
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLST-------D------ 261 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~-------~------ 261 (383)
.. ......... ...-+|.+...+..+ ..|..+|+.+...... ... .... +
T Consensus 230 ~~-~h~~~v~~~------~~~~~g~~l~s~s~D--------~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 230 FT-GHREWVRMV------RPNQDGTLIASCSND--------QTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSI 293 (410)
T ss_dssp EE-CCSSCEEEE------EECTTSSEEEEEETT--------SCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGG
T ss_pred Ee-CCCccEEEE------EECCCCCEEEEEcCC--------CeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccch
Confidence 11 111000000 112245555544433 4688888876644322 111 0000 0
Q ss_pred ----CCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCce
Q 016751 262 ----DADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGY 337 (383)
Q Consensus 262 ----~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 337 (383)
..........|.+.+.+..+ ..+.+|-+... .....+.........+.+..+|..++. ...++
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D----~~i~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s--~s~D~- 360 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRD----KTIKMWDVSTG------MCLMTLVGHDNWVRGVLFHSGGKFILS--CADDK- 360 (410)
T ss_dssp GGCCSCC-------CCEEEEEETT----SEEEEEETTTT------EEEEEEECCSSCEEEEEECSSSSCEEE--EETTT-
T ss_pred hhhccccccccCCCCCEEEEEeCC----CeEEEEECCCC------ceEEEEECCCCcEEEEEEcCCCCEEEE--EeCCC-
Confidence 00000001124555555544 48999988641 233333322113455666677766666 43566
Q ss_pred EEEEEeCCCCeE
Q 016751 338 GLLVYNPHSDTF 349 (383)
Q Consensus 338 ~~~~yd~~t~~~ 349 (383)
.+.++|.++++.
T Consensus 361 ~i~vwd~~~~~~ 372 (410)
T 1vyh_C 361 TLRVWDYKNKRC 372 (410)
T ss_dssp EEEEECCTTSCC
T ss_pred eEEEEECCCCce
Confidence 499999988753
No 113
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=80.78 E-value=27 Score=30.17 Aligned_cols=193 Identities=13% Similarity=0.046 Sum_probs=101.2
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKN 195 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~ 195 (383)
+.+|.|....+....+.+.+.|+.|++-.. +|... ...+.|+... .+ ++..... ...+.+|+..+. +.
T Consensus 29 ~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---~~fgeGi~~~---g~--~lyv~t~~~~~v~viD~~t~--~v 98 (266)
T 2iwa_A 29 AENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD---SYFGEGLTLL---NE--KLYQVVWLKNIGFIYDRRTL--SN 98 (266)
T ss_dssp CSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT---TCCEEEEEEE---TT--EEEEEETTCSEEEEEETTTT--EE
T ss_pred eCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC---CcceEEEEEe---CC--EEEEEEecCCEEEEEECCCC--cE
Confidence 344787777642346789999999988554 33221 1233444443 32 3433332 668899998865 33
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCC-CCCCCceEEEEeCCe
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDL-STDDADKYLNVFDGY 273 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~-~~~~~~~~l~~~~g~ 273 (383)
+. .++.+ . .... ++..+|.-.|++.. ...+..+|+.+.+- ..++.. .. .....-..+...+|+
T Consensus 99 ~~-~i~~g-~-~~g~---glt~Dg~~l~vs~g--------s~~l~viD~~t~~v~~~I~Vg-~~~~p~~~~nele~~dg~ 163 (266)
T 2iwa_A 99 IK-NFTHQ-M-KDGW---GLATDGKILYGSDG--------TSILYEIDPHTFKLIKKHNVK-YNGHRVIRLNELEYINGE 163 (266)
T ss_dssp EE-EEECC-S-SSCC---EEEECSSSEEEECS--------SSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEETTE
T ss_pred EE-EEECC-C-CCeE---EEEECCCEEEEECC--------CCeEEEEECCCCcEEEEEEEC-CCCcccccceeEEEECCE
Confidence 33 33332 1 1111 56667653334432 25899999987543 444432 11 000011233334788
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-------------eeEEEEEeeCC-cEEEEEEeeCCceEE
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-------------IWWPLGFTERG-KIFIRGECRHGGYGL 339 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-------------~~~~~~~~~~g-~i~~~~~~~~~~~~~ 339 (383)
|++..... -+|.+++- ..+..+..|+...+ ...-+++..++ .+|+. . ..+.++
T Consensus 164 lyvn~~~~------~~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT--g-k~~~~v 230 (266)
T 2iwa_A 164 VWANIWQT------DCIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT--G-KLWPKL 230 (266)
T ss_dssp EEEEETTS------SEEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE--E-TTCSEE
T ss_pred EEEecCCC------CeEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE--C-CCCCeE
Confidence 87554322 25777764 23455566654310 12224445454 56666 5 555568
Q ss_pred EEEeCCCCe
Q 016751 340 LVYNPHSDT 348 (383)
Q Consensus 340 ~~yd~~t~~ 348 (383)
+..++.+..
T Consensus 231 ~~i~l~~~~ 239 (266)
T 2iwa_A 231 FEIKLHLVR 239 (266)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeccc
Confidence 888776653
No 114
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.30 E-value=30 Score=30.34 Aligned_cols=206 Identities=10% Similarity=0.055 Sum_probs=97.4
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccce-----eecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcC
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKY-----MTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLR 189 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~-----~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~ 189 (383)
.-+.+|-++.... .++.+.|||...... ..+....... ....+.+.|. + . .++.......+.+|+..
T Consensus 65 ~~sp~~~~las~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---g-~-~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 65 AWRPHTSLLAAGS--FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND---G-Y-YLATCSRDKSVWIWETD 137 (330)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT---S-C-EEEEEETTSCEEEEECC
T ss_pred EECCCCCEEEEEe--CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC---C-C-EEEEEeCCCEEEEEecc
Confidence 3345565554443 577888888743211 1111111111 1245556553 2 2 33333336688999984
Q ss_pred C--CceeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCc
Q 016751 190 S--NSWKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDAD 264 (383)
Q Consensus 190 t--~~W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~ 264 (383)
+ ..++.+. .+........ ++.+ +|.+...+..+ ..|..+|..+..+..+ .+. .+.. ..
T Consensus 138 ~~~~~~~~~~-~~~~h~~~v~-----~v~~~p~~~~l~s~s~D--------~~i~iW~~~~~~~~~~~~~~-~h~~--~v 200 (330)
T 2hes_X 138 ESGEEYECIS-VLQEHSQDVK-----HVIWHPSEALLASSSYD--------DTVRIWKDYDDDWECVAVLN-GHEG--TV 200 (330)
T ss_dssp TTCCCCEEEE-EECCCSSCEE-----EEEECSSSSEEEEEETT--------SCEEEEEEETTEEEEEEEEC-CCSS--CE
T ss_pred CCCCCeEEEE-EeccCCCceE-----EEEECCCCCEEEEEcCC--------CeEEEEECCCCCeeEEEEcc-CCCC--cE
Confidence 3 3454433 1110000000 1221 45544433332 4678888877766544 232 2111 11
Q ss_pred eEEEEeCC--eEEEEEecCCCCccEEEEEEeccCC--CCCCeEEEEEecC-CCceeEEEEEeeCCcEEEEEEeeCCceEE
Q 016751 265 KYLNVFDG--YLCVFATIPNNTFRSYELWVMKEYG--LTESWTKLYTIEK-PQRIWWPLGFTERGKIFIRGECRHGGYGL 339 (383)
Q Consensus 265 ~~l~~~~g--~L~~v~~~~~~~~~~l~iW~l~~~~--~~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 339 (383)
..+.-..+ ...++.+..+ ..+.+|.+.... ....|.....++. .......+++..++.|+.. . .++ .+
T Consensus 201 ~~~~~~~~~~~~~l~s~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~--~-~dg-~v 273 (330)
T 2hes_X 201 WSSDFDKTEGVFRLCSGSDD---STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASV--G-ADG-VL 273 (330)
T ss_dssp EEEEECCSSSSCEEEEEETT---SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEE--E-TTS-CE
T ss_pred EEEEecCCCCeeEEEEEeCC---CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEE--e-CCC-EE
Confidence 22222222 3334444443 589999986431 2345766666543 1112444555555544444 3 555 49
Q ss_pred EEEeCCCCeEEEE
Q 016751 340 LVYNPHSDTFKCI 352 (383)
Q Consensus 340 ~~yd~~t~~~~~v 352 (383)
..||..+++++.+
T Consensus 274 ~iw~~~~~~~~~~ 286 (330)
T 2hes_X 274 AVYEEVDGEWKVF 286 (330)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEcCCCceEEE
Confidence 9999998877655
No 115
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=79.88 E-value=29 Score=29.97 Aligned_cols=195 Identities=7% Similarity=-0.016 Sum_probs=89.8
Q ss_pred CceEEEeecCCCCceEEEEccCccceee-cC--CCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMT-LP--RPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP--~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
+|-+++... .++.+.|||..+.+... .| ...... ....+.+.+. +.+ ++.......+.+++........
T Consensus 50 ~~~~l~S~s--~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d----g~~-l~s~~~d~~i~~~~~~~~~~~~ 122 (340)
T 4aow_A 50 FPDMILSAS--RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD----GQF-ALSGSWDGTLRLWDLTTGTTTR 122 (340)
T ss_dssp CTTEEEEEE--TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT----SSE-EEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEc--CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC----CCE-EEEEcccccceEEeecccceee
Confidence 354444443 57788899876644221 11 111111 1144555543 223 3322325567777777664433
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEE--eCCe
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV--FDGY 273 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~g~ 273 (383)
.. .......... ...-+|.....+..+ ..+..+|+....-...... .... ....+.. ....
T Consensus 123 ~~-~~~~~~~~~~-----~~~~~~~~l~s~s~d--------~~~~~~d~~~~~~~~~~~~-~~~~--~v~~~~~~~~~~~ 185 (340)
T 4aow_A 123 RF-VGHTKDVLSV-----AFSSDNRQIVSGSRD--------KTIKLWNTLGVCKYTVQDE-SHSE--WVSCVRFSPNSSN 185 (340)
T ss_dssp EE-ECCSSCEEEE-----EECTTSSCEEEEETT--------SCEEEECTTSCEEEEECSS-SCSS--CEEEEEECSCSSS
T ss_pred ee-cCCCCceeEE-----EEeecCccceeecCC--------CeEEEEEeCCCceEEEEec-cccC--cccceEEccCCCC
Confidence 33 1111110000 111122222222222 3677788776554444333 2211 1112222 2223
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
..++..... ..+.+|.++. ...+..+.........+++..+|.+++. ...++ .+..||+++.+..
T Consensus 186 ~~~~s~~~d---~~i~i~d~~~------~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~Dg-~i~iwd~~~~~~~ 250 (340)
T 4aow_A 186 PIIVSCGWD---KLVKVWNLAN------CKLKTNHIGHTGYLNTVTVSPDGSLCAS--GGKDG-QAMLWDLNEGKHL 250 (340)
T ss_dssp CEEEEEETT---SCEEEEETTT------TEEEEEECCCSSCEEEEEECTTSSEEEE--EETTC-EEEEEETTTTEEE
T ss_pred cEEEEEcCC---CEEEEEECCC------CceeeEecCCCCcEEEEEECCCCCEEEE--EeCCC-eEEEEEeccCcee
Confidence 333333333 5889998764 2233333322113455666777877776 43455 4999999987643
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=79.46 E-value=49 Score=33.09 Aligned_cols=98 Identities=9% Similarity=0.146 Sum_probs=59.1
Q ss_pred cEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-C--CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 016751 237 WLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-D--GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 312 (383)
Q Consensus 237 ~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~--g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 312 (383)
..|..+|+.++++..+ .+. .+.. ....+.-. + |.+.+.+..+ ..+.+|.++. ..|.....+....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~-~h~~--~V~~l~~s~~~~~~~l~s~s~D----g~I~vwd~~~----~~~~~~~~~~~h~ 99 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLT-GHEG--PVWRVDWAHPKFGTILASCSYD----GKVLIWKEEN----GRWSQIAVHAVHS 99 (753)
T ss_dssp TEEEEEEEETTEEEEEEEEC-CCSS--CEEEEEECCTTSCSEEEEEETT----SCEEEEEEET----TEEEEEEEECCCS
T ss_pred CcEEEEecCCCCCccceecc-CCcC--ceEEEEecCCCCCCEEEEEeCC----CeEEEEECCC----CcccccccccCCC
Confidence 5888999887766655 333 2211 12233332 2 5666665555 4899999886 4466666665332
Q ss_pred ceeEEEEEeeC--CcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 313 RIWWPLGFTER--GKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 313 ~~~~~~~~~~~--g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
.....+.+..+ |.+++. ...++ .+.+||++++.
T Consensus 100 ~~V~~v~~sp~~~~~~l~s--gs~dg-~I~vwdl~~~~ 134 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLV--ASSDG-KVSVVEFKENG 134 (753)
T ss_dssp SCEEEEEECCGGGCSEEEE--EETTS-EEEEEECCSSS
T ss_pred CCeEEEEECCCCCCCEEEE--EeCCC-cEEEEEeecCC
Confidence 23555666665 666666 43455 49999998873
No 117
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=79.36 E-value=55 Score=32.89 Aligned_cols=205 Identities=15% Similarity=0.196 Sum_probs=104.6
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCC-----CC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEc
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLN-----PR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSL 188 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~-----~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss 188 (383)
+....+|.|.+.. ....++++||.++++......+.. .. ...+..|+. +. +.+.....+.+|+.
T Consensus 220 i~~d~~g~lwigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~---g~----lWigt~~Gl~~~~~ 289 (795)
T 4a2l_A 220 ILQQSPTRIWVAT---EGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQ---NR----LWIGTFNDLNIYHE 289 (795)
T ss_dssp EEEEETTEEEEEE---BSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTT---SC----EEEEESSCEEEEET
T ss_pred EEEcCCCCEEEEE---CCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCC---CC----EEEEeCChhheEcC
Confidence 3334566665554 234689999999888776543211 11 134444433 21 23332337889999
Q ss_pred CCCceeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCC-CC-CCCCCCCc
Q 016751 189 RSNSWKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMM-PY-DLSTDDAD 264 (383)
Q Consensus 189 ~t~~W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~l-P~-~~~~~~~~ 264 (383)
.++.++... ..+..........-.+++. +|.+ |++... ..|..||..+..|..+.. +. ........
T Consensus 290 ~~~~~~~~~-~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~~--------~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V 359 (795)
T 4a2l_A 290 GTDSFASYS-SNPVENGSLSQRSVRSIFMDSQGGM-WLGTYF--------GGLNYYHPIRNRFKNIRNIPYKNSLSDNVV 359 (795)
T ss_dssp TTTEEEEEC-CCTTSTTSCSSSCEEEEEECTTSCE-EEEESS--------SCEEEECGGGGSSEEECCCTTSSSCSCSSE
T ss_pred CCCeEEEEe-cCCCCCCCCCCCcEEEEEEeCCcCE-EEEECC--------CCeEEeCCCcccceEEcCCCCCCCCCCCee
Confidence 999888765 2221100000000003333 3554 666543 379999999888877632 20 11112122
Q ss_pred eEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe------cCCCceeEEEEEeeCCc-EEEEEEeeCCc
Q 016751 265 KYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI------EKPQRIWWPLGFTERGK-IFIRGECRHGG 336 (383)
Q Consensus 265 ~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i------~~~~~~~~~~~~~~~g~-i~~~~~~~~~~ 336 (383)
..+.+. +|.|.+..... .+..+..+ ...+.....- .+.......+....+|. |++. . .++
T Consensus 360 ~~i~~d~~g~lWiGt~~~-----Gl~~~~~~----~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig--t-~~~ 427 (795)
T 4a2l_A 360 SCIVEDKDKNLWIGTNDG-----GLNLYNPI----TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG--T-HAG 427 (795)
T ss_dssp EEEEECTTSCEEEEESSS-----CEEEECTT----TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE--E-TTT
T ss_pred EEEEECCCCCEEEEECCC-----CeEEEcCC----CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE--e-CcC
Confidence 344444 36776644322 23333222 1334432110 01111244455556788 7776 5 545
Q ss_pred eEEEEEeCCCCeEEEE
Q 016751 337 YGLLVYNPHSDTFKCI 352 (383)
Q Consensus 337 ~~~~~yd~~t~~~~~v 352 (383)
. ++.||+++++++.+
T Consensus 428 G-l~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 428 G-LSILHRNSGQVENF 442 (795)
T ss_dssp E-EEEEETTTCCEEEE
T ss_pred c-eeEEeCCCCcEEEe
Confidence 4 99999999888765
No 118
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=79.25 E-value=34 Score=30.43 Aligned_cols=192 Identities=8% Similarity=-0.033 Sum_probs=95.5
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
..+.+|-.++... .++.+.+||..+++....-.... .....+.+.+. ... .++.......+.+|+.++++-..
T Consensus 146 ~~spdg~~l~sgs--~dg~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~---~~~-~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 146 SVFSDGTQAVSGG--KDFSVKVWDLSQKAVLKSYNAHS-SEVNCVAACPG---KDT-IFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EECSSSSEEEEEE--TTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTT---CSS-CEEEEETTSCEEECCTTSSSCBC
T ss_pred EECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEccC---CCc-eeeeeccCCceEEEECCCCceee
Confidence 3455666555543 67789999998877554322111 11244555554 332 33333335678889888764322
Q ss_pred eccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCCCCCCceEEEEe-
Q 016751 196 IAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~- 270 (383)
.. ...... .... ++.+ ++.+...+... ..|..+|+.+.+-. .+... .. ....++-.
T Consensus 219 ~~-~~~~~~--~~v~---~v~~sp~~~~~la~g~~d--------~~i~~wd~~~~~~~~~~~~~-~~----~v~~l~~sp 279 (357)
T 4g56_B 219 RI-DFCASD--TIPT---SVTWHPEKDDTFACGDET--------GNVSLVNIKNPDSAQTSAVH-SQ----NITGLAYSY 279 (357)
T ss_dssp BC-CCTTCC--SCEE---EEEECTTSTTEEEEEESS--------SCEEEEESSCGGGCEEECCC-SS----CEEEEEECS
T ss_pred ee-eecccc--cccc---chhhhhcccceEEEeecc--------cceeEEECCCCcEeEEEecc-ce----eEEEEEEcC
Confidence 21 111000 0000 2322 24444444333 47888998876432 22222 11 12234433
Q ss_pred CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ~g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+| ++.+.+..+ ..+.||-++. . .....+.... ....+++.. ++.+++. ...++. +..+|+.++
T Consensus 280 ~~~~~lasgs~D----~~i~iwd~~~----~--~~~~~~~H~~-~V~~vafsP~d~~~l~s--~s~Dg~-v~iW~~~~~ 344 (357)
T 4g56_B 280 HSSPFLASISED----CTVAVLDADF----S--EVFRDLSHRD-FVTGVAWSPLDHSKFTT--VGWDHK-VLHHHLPSE 344 (357)
T ss_dssp SSSCCEEEEETT----SCEEEECTTS----C--EEEEECCCSS-CEEEEEECSSSTTEEEE--EETTSC-EEEEECC--
T ss_pred CCCCEEEEEeCC----CEEEEEECCC----C--cEeEECCCCC-CEEEEEEeCCCCCEEEE--EcCCCe-EEEEECCCC
Confidence 34 444444433 5899997653 1 2333443332 345566653 6667666 435664 999998764
No 119
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=79.02 E-value=27 Score=29.16 Aligned_cols=202 Identities=10% Similarity=0.026 Sum_probs=99.6
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCc-cceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe----cCeEEEEEcC
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLI-KKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV----NADAEVYSLR 189 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t-~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~----~~~~~vyss~ 189 (383)
+.-+-+|-.++.. ....++++|..+ ++...+...........+.+.|. +.+ ++.... ...+.+++..
T Consensus 47 ~~~spdg~~l~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~-l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 47 PNWSPDGKYLLLN---SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD----GAL-YAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp EEECTTSSEEEEE---ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT----SSE-EEEEECTTTSSCEEEEEETT
T ss_pred eEECCCCCEEEEE---cCCeEEEEeCCCCCCceEeccccccccccceEECCC----CCE-EEEEEeCCCCcceEEEEECC
Confidence 4445566654444 356899999999 87777654432222233444443 222 332221 3566777777
Q ss_pred CCceeeeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEE
Q 016751 190 SNSWKNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLN 268 (383)
Q Consensus 190 t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~ 268 (383)
++.-+.+. ........ ...-+|. +++..... ....|..+|..+.....+... .. ....+.
T Consensus 119 ~~~~~~~~-~~~~~~~~-------~~spdg~~l~~~~~~~------~~~~l~~~~~~~~~~~~~~~~-~~----~~~~~~ 179 (297)
T 2ojh_A 119 GGTPRLMT-KNLPSYWH-------GWSPDGKSFTYCGIRD------QVFDIYSMDIDSGVETRLTHG-EG----RNDGPD 179 (297)
T ss_dssp CCCCEECC-SSSSEEEE-------EECTTSSEEEEEEEET------TEEEEEEEETTTCCEEECCCS-SS----CEEEEE
T ss_pred CCceEEee-cCCCccce-------EECCCCCEEEEEECCC------CceEEEEEECCCCcceEcccC-CC----ccccce
Confidence 76655444 22111100 1222454 44344332 123566677776665544222 11 112233
Q ss_pred Ee-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCC--------c-eE
Q 016751 269 VF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG--------G-YG 338 (383)
Q Consensus 269 ~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~--------~-~~ 338 (383)
-. +|+..++..... ....||.++... ... ..+.........+.+..+|+.++.. ...+ . ..
T Consensus 180 ~s~dg~~l~~~~~~~---~~~~i~~~~~~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRT---GQMQIWRVRVDG--SSV---ERITDSAYGDWFPHPSPSGDKVVFV-SYDADVFDHPRDLDVR 250 (297)
T ss_dssp ECTTSSEEEEEECTT---SSCEEEEEETTS--SCE---EECCCCSEEEEEEEECTTSSEEEEE-EEETTCCSCCSSEEEE
T ss_pred ECCCCCEEEEEecCC---CCccEEEECCCC--CCc---EEEecCCcccCCeEECCCCCEEEEE-EcCCCCCcccccCceE
Confidence 32 455444444323 478999987422 222 2232222123345566677544431 2121 1 25
Q ss_pred EEEEeCCCCeEEEE
Q 016751 339 LLVYNPHSDTFKCI 352 (383)
Q Consensus 339 ~~~yd~~t~~~~~v 352 (383)
++.+|+++++.+.+
T Consensus 251 l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 251 VQLMDMDGGNVETL 264 (297)
T ss_dssp EEEEETTSCSCEEE
T ss_pred EEEEecCCCCceee
Confidence 99999999887665
No 120
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=78.70 E-value=32 Score=29.72 Aligned_cols=209 Identities=10% Similarity=0.035 Sum_probs=102.3
Q ss_pred EEEccCce-EEEeecCCCCceEEEEcc---Cccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcC
Q 016751 115 VVGSCNGV-LCFCSNGSDRSLIYLWNP---LIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLR 189 (383)
Q Consensus 115 ~~~s~~Gl-l~~~~~~~~~~~~~v~NP---~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~ 189 (383)
+.-+.+|- |++... ....+.+++. .+.+... ++... ....+.+++. +.+-++.-.....+.+|+..
T Consensus 89 ~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~d----g~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDVVEGLD---GCHSANISPD----NRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp EEECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEEECCCT---TBCCCEECTT----SSEEEEEEGGGTEEEEEEEC
T ss_pred EEEcCCCCEEEEEec--CCCeEEEEECCCCccccccccccCCC---CceEEEECCC----CCEEEEecCCCCEEEEEEec
Confidence 44455554 444442 3567888887 4333332 22211 1234555554 23333322136789999998
Q ss_pred C-Cceeeec---cCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECC--CCeee---Ee-CCCCCC
Q 016751 190 S-NSWKNIA---YGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFA--KEIFQ---TV-MMPYDL 258 (383)
Q Consensus 190 t-~~W~~~~---~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~--~~~~~---~i-~lP~~~ 258 (383)
+ ++.+... ...+..... ... .+.-+|. +|...... ..|..||+. +..+. .+ .+| ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~---~~~pdg~~l~~~~~~~--------~~i~~~~~~~~~g~~~~~~~~~~~~-~~ 226 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGP-RHM---VFHPNEQYAYCVNELN--------SSVDVWELKDPHGNIECVQTLDMMP-EN 226 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCE-EEE---EECTTSSEEEEEETTT--------TEEEEEESSCTTSCCEEEEEEECSC-TT
T ss_pred CCCceeeecccccccCCCCCc-ceE---EECCCCCEEEEEeCCC--------CEEEEEEecCCCCcEEEEeeccccC-cc
Confidence 7 6665321 011111000 000 2223565 55544332 578899984 34443 22 345 32
Q ss_pred CCCC-CceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc
Q 016751 259 STDD-ADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG 336 (383)
Q Consensus 259 ~~~~-~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~ 336 (383)
.... ....+... +|+..++..... ..+.+|.++.. ...+..+..++... ....+++..+|+.++.. ...++
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~---~~i~v~d~~~~--~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-~~~~~ 299 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTA---SLITVFSVSED--GSVLSKEGFQPTET-QPRGFNVDHSGKYLIAA-GQKSH 299 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTT---TEEEEEEECTT--SCCEEEEEEEECSS-SCCCEEECTTSSEEEEE-CTTTC
T ss_pred ccccCCccceEECCCCCEEEEEecCC---CEEEEEEEcCC--CCceEEeeeecCCC-ccceEEECCCCCEEEEe-cCCCC
Confidence 1111 11124433 354333333333 58999999753 24467766666543 13345666777644441 31233
Q ss_pred eEEEEE--eCCCCeEEEEE
Q 016751 337 YGLLVY--NPHSDTFKCIG 353 (383)
Q Consensus 337 ~~~~~y--d~~t~~~~~v~ 353 (383)
.+.+| |.++++++.+.
T Consensus 300 -~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 300 -HISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp -EEEEEEEETTTTEEEEEE
T ss_pred -eEEEEEEcCCCceeeEcc
Confidence 35555 88898887763
No 121
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=78.70 E-value=46 Score=31.62 Aligned_cols=196 Identities=8% Similarity=-0.045 Sum_probs=92.7
Q ss_pred EccCceEEEeecCCCCceEEEEccCcc----c-eeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIK----K-YMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS 190 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~----~-~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t 190 (383)
-+.+|-++... ..+.+.|+|..++ + ...+..-. .. ...+.+.|. .+.-.++.......+.+|+..+
T Consensus 26 ~spdg~~l~~~---~~~~v~v~~~~~~~~~~~~~~~~~~h~--~~~v~~~~~sp~---~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 26 YDPTTNAIAYP---CGKSAFVRCLDDGDSKVPPVVQFTGHG--SSVVTTVKFSPI---KGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp EETTTTEEEEE---ETTEEEEEECCSSCCSSCSEEEECTTT--TSCEEEEEECSS---TTCCEEEEEETTSEEEEEEEEE
T ss_pred ECCCCCEEEEe---cCCeEEEEECCCCCCccccceEEecCC--CceEEEEEECcC---CCCCEEEEecCCCEEEEEeCCC
Confidence 34455433333 2457889998876 3 33343221 12 345666661 1222333333356788888865
Q ss_pred C------ceeeeccCC---CceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCC
Q 016751 191 N------SWKNIAYGF---PRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTD 261 (383)
Q Consensus 191 ~------~W~~~~~~~---p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~ 261 (383)
+ ..+... .. ....... ...-+|.....+... ......|..+|... ....+... ..
T Consensus 98 ~~~~~~~~~~~~~-~~~~~~~~v~~~------~~s~~~~~l~~~~~~----~~~~~~v~~~d~~~-~~~~~~~~---~~- 161 (615)
T 1pgu_A 98 DKESNSVEVNVKS-EFQVLAGPISDI------SWDFEGRRLCVVGEG----RDNFGVFISWDSGN-SLGEVSGH---SQ- 161 (615)
T ss_dssp EGGGTEEEEEEEE-EEECCSSCEEEE------EECTTSSEEEEEECC----SSCSEEEEETTTCC-EEEECCSC---SS-
T ss_pred Ccccccccccccc-hhhcccccEEEE------EEeCCCCEEEEeccC----CCCccEEEEEECCC-cceeeecC---Cc-
Confidence 4 333222 11 1111100 122244443333322 12224677777332 22222211 11
Q ss_pred CCceEEEEeC-Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc---eeEEEEEeeC-CcEEEEEEeeCC
Q 016751 262 DADKYLNVFD-GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTER-GKIFIRGECRHG 335 (383)
Q Consensus 262 ~~~~~l~~~~-g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~-g~i~~~~~~~~~ 335 (383)
....+.-.. |. +.+....+ ..+.+|.++. ......+..... ....+.+..+ |..++. ...+
T Consensus 162 -~v~~~~~~~~~~~~l~~~~~d----~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d 228 (615)
T 1pgu_A 162 -RINACHLKQSRPMRSMTVGDD----GSVVFYQGPP------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT--VGSD 228 (615)
T ss_dssp -CEEEEEECSSSSCEEEEEETT----TEEEEEETTT------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEE--EETT
T ss_pred -cEEEEEECCCCCcEEEEEeCC----CcEEEEeCCC------cceeeeecccCCCCceEEEEEECCCCCCEEEE--EeCC
Confidence 112233332 44 44444444 5899998654 344455543321 2455666667 776666 4245
Q ss_pred ceEEEEEeCCCCeEE
Q 016751 336 GYGLLVYNPHSDTFK 350 (383)
Q Consensus 336 ~~~~~~yd~~t~~~~ 350 (383)
+ .+.+||+++++..
T Consensus 229 g-~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 229 R-KISCFDGKSGEFL 242 (615)
T ss_dssp C-CEEEEETTTCCEE
T ss_pred C-eEEEEECCCCCEe
Confidence 5 4999999887654
No 122
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.07 E-value=29 Score=31.93 Aligned_cols=112 Identities=11% Similarity=-0.032 Sum_probs=61.7
Q ss_pred ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CC-eEEEEEecCCCCccEEEEEEec
Q 016751 217 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DG-YLCVFATIPNNTFRSYELWVMK 294 (383)
Q Consensus 217 ~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g-~L~~v~~~~~~~~~~l~iW~l~ 294 (383)
-+|.|||..... ..|..+|+.+.....+... ... .. ++.. +| .|++...... . .||.++
T Consensus 140 ~~g~lyv~d~~~--------~~I~~id~~~g~~~~~~~~-~~~---~~--ia~~~~g~~l~~~d~~~~---~--~I~~~d 200 (409)
T 3hrp_A 140 GNNTVLAYQRDD--------PRVRLISVDDNKVTTVHPG-FKG---GK--PAVTKDKQRVYSIGWEGT---H--TVYVYM 200 (409)
T ss_dssp STTEEEEEETTT--------TEEEEEETTTTEEEEEEET-CCB---CB--CEECTTSSEEEEEBSSTT---C--EEEEEE
T ss_pred CCCCEEEEecCC--------CcEEEEECCCCEEEEeecc-CCC---Cc--eeEecCCCcEEEEecCCC---c--eEEEEE
Confidence 468999987654 5899999998877666322 111 11 3332 23 4555543322 2 566666
Q ss_pred cCCCCCCeEEEEEecCCCc-eeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 295 EYGLTESWTKLYTIEKPQR-IWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 295 ~~~~~~~W~~~~~i~~~~~-~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
.... ........+..... ...-+++.. +|.||+. . ..+ .++.||++++....+
T Consensus 201 ~~~~-~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~--d-~~~-~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 201 KASG-WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV--D-SNK-NFGRFNVKTQEVTLI 255 (409)
T ss_dssp GGGT-TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE--C-TTC-EEEEEETTTCCEEEE
T ss_pred cCCC-ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE--E-CCC-cEEEEECCCCCEEEE
Confidence 4321 11222222222111 233456665 6788887 5 444 499999998876555
No 123
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.91 E-value=61 Score=32.58 Aligned_cols=187 Identities=12% Similarity=0.129 Sum_probs=93.4
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeeccCC--CceeeeccC
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAYGF--PRSIEINRS 209 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~~~--p~~~~~~~~ 209 (383)
..++.+|+.++++..++..+.......+..|.. + . +.+.. ...+..|+..+++++...... +.......-
T Consensus 193 ~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~---g--~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i 265 (795)
T 4a2l_A 193 DGLYTYSITQKTFEKVIPILGTKQIQAILQQSP---T--R--IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYI 265 (795)
T ss_dssp SCEEEEETTTCCEEECC----CCCEEEEEEEET---T--E--EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBE
T ss_pred CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCC---C--C--EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeE
Confidence 457788888888776643221111233333432 1 1 22222 447888999888887665111 111100000
Q ss_pred cccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCC-C--CCCCCCCceEEEEe-CCeEEEEEecCCC
Q 016751 210 HINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMP-Y--DLSTDDADKYLNVF-DGYLCVFATIPNN 283 (383)
Q Consensus 210 ~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP-~--~~~~~~~~~~l~~~-~g~L~~v~~~~~~ 283 (383)
. +++. +|. .|++... .+..||..+..|..+... . ..........+.+. +|.|.+.....
T Consensus 266 ~---~i~~d~~g~-lWigt~~---------Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~-- 330 (795)
T 4a2l_A 266 R---SLAMDSQNR-LWIGTFN---------DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFG-- 330 (795)
T ss_dssp E---EEEECTTSC-EEEEESS---------CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSS--
T ss_pred E---EEEEcCCCC-EEEEeCC---------hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCC--
Confidence 0 3333 454 5666543 689999999999887322 0 11111122334443 36666654322
Q ss_pred CccEEEEEEeccCCCCCCeEEEEEecC----CCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 284 TFRSYELWVMKEYGLTESWTKLYTIEK----PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 284 ~~~~l~iW~l~~~~~~~~W~~~~~i~~----~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
.+..+..+. ..+......+. .......+....+|.|++. . .++. +..||+++++++.+
T Consensus 331 ---Gl~~~~~~~----~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiG--t-~~~G-l~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 331 ---GLNYYHPIR----NRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIG--T-NDGG-LNLYNPITQRFTSY 392 (795)
T ss_dssp ---CEEEECGGG----GSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEE--E-SSSC-EEEECTTTCCEEEE
T ss_pred ---CeEEeCCCc----ccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEE--E-CCCC-eEEEcCCCCcEEEE
Confidence 233332221 22333221111 1102444555567788887 5 4443 99999999888765
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=77.08 E-value=55 Score=31.65 Aligned_cols=201 Identities=10% Similarity=-0.000 Sum_probs=104.2
Q ss_pred CceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeecc
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAY 198 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~ 198 (383)
++++.+... ....+.|.|+.|++... +|.... ..++.+.+. +.|-.+ ......+.+|+..+.+-+.+.
T Consensus 166 ~~~~~V~~~--~~~~V~viD~~t~~v~~~i~~g~~---p~~v~~SpD----Gr~lyv-~~~dg~V~viD~~~~t~~~v~- 234 (567)
T 1qks_A 166 ENLFSVTLR--DAGQIALIDGSTYEIKTVLDTGYA---VHISRLSAS----GRYLFV-IGRDGKVNMIDLWMKEPTTVA- 234 (567)
T ss_dssp GGEEEEEET--TTTEEEEEETTTCCEEEEEECSSC---EEEEEECTT----SCEEEE-EETTSEEEEEETTSSSCCEEE-
T ss_pred CceEEEEeC--CCCeEEEEECCCCeEEEEEeCCCC---ccceEECCC----CCEEEE-EcCCCeEEEEECCCCCCcEeE-
Confidence 456666653 67899999999987653 443221 134556554 334333 233557899998522223333
Q ss_pred CCCceeeeccCcccceeE----ECce-EEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCC-CC------CCCce
Q 016751 199 GFPRSIEINRSHINSSVF----LNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDL-ST------DDADK 265 (383)
Q Consensus 199 ~~p~~~~~~~~~~~~~v~----~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~-~~------~~~~~ 265 (383)
.++.+..... - .+. -+|+ +|...... ..+.++|..+.+- ..++.. .. .. .....
T Consensus 235 ~i~~G~~P~~-i---a~s~~~~pDGk~l~v~n~~~--------~~v~ViD~~t~~~~~~i~~~-~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 235 EIKIGSEARS-I---ETSKMEGWEDKYAIAGAYWP--------PQYVIMDGETLEPKKIQSTR-GMTYDEQEYHPEPRVA 301 (567)
T ss_dssp EEECCSEEEE-E---EECCSTTCTTTEEEEEEEET--------TEEEEEETTTCCEEEEEECC-EECTTTCCEESCCCEE
T ss_pred EEecCCCCce-e---EEccccCCCCCEEEEEEccC--------CeEEEEECCCCcEEEEEecc-ccccccccccCCCceE
Confidence 3322211110 0 222 1574 55554443 5889999876544 233332 11 00 00111
Q ss_pred EEEEeC-CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 016751 266 YLNVFD-GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 266 ~l~~~~-g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~ 344 (383)
.+.... +..+++...+. . .||+++-.. ....++..|+... .....++..+|+.+++. . ....++.++|.
T Consensus 302 ~i~~s~~~~~~vv~~~~~---g--~v~~vd~~~--~~~~~v~~i~~~~-~~~d~~~~pdgr~~~va-~-~~sn~V~ViD~ 371 (567)
T 1qks_A 302 AILASHYRPEFIVNVKET---G--KILLVDYTD--LNNLKTTEISAER-FLHDGGLDGSHRYFITA-A-NARNKLVVIDT 371 (567)
T ss_dssp EEEECSSSSEEEEEETTT---T--EEEEEETTC--SSEEEEEEEECCS-SEEEEEECTTSCEEEEE-E-GGGTEEEEEET
T ss_pred EEEEcCCCCEEEEEecCC---C--eEEEEecCC--Cccceeeeeeccc-cccCceECCCCCEEEEE-e-CCCCeEEEEEC
Confidence 233332 45555555443 2 455555321 2355666676554 35556777778655551 3 22225999999
Q ss_pred CCCeEEE-EEE
Q 016751 345 HSDTFKC-IGV 354 (383)
Q Consensus 345 ~t~~~~~-v~~ 354 (383)
+|+++.. +..
T Consensus 372 ~t~kl~~~i~v 382 (567)
T 1qks_A 372 KEGKLVAIEDT 382 (567)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEEec
Confidence 9998754 444
No 125
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=76.78 E-value=37 Score=29.45 Aligned_cols=201 Identities=11% Similarity=0.030 Sum_probs=99.3
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe--cCeEEEEEcCCCc
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV--NADAEVYSLRSNS 192 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~--~~~~~vyss~t~~ 192 (383)
+.-..+|-|.+.+. ...+++.+||.++....++... ...++.+++. . .. +|+-.. ...+..|+..+++
T Consensus 37 ia~~~~g~lyv~d~--~~~~I~~~d~~g~~~~~~~~~~---~p~gia~~~d---G-~l-~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 37 LASAPDGTIFVTNH--EVGEIVSITPDGNQQIHATVEG---KVSGLAFTSN---G-DL-VATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTTCCEEEEEECSS---EEEEEEECTT---S-CE-EEEEECTTSCEEEEEECTTSC
T ss_pred EEECCCCCEEEEeC--CCCeEEEECCCCceEEEEeCCC---CceeEEEcCC---C-cE-EEEeccCCcceEEEEcCCCCe
Confidence 33344677766663 4678899999876544333221 1256677764 3 22 222211 2247778878887
Q ss_pred eeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe---C-----CCCCCCCCCCc
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---M-----MPYDLSTDDAD 264 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i---~-----lP~~~~~~~~~ 264 (383)
.+.+. ..+..... ... .+..+|.+|...... ..|..+|..+...+.. . .+.... ...
T Consensus 107 ~~~~~-~~~~~~~~-~g~---~~~~~~~~~v~d~~~--------g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~--~~p 171 (306)
T 2p4o_A 107 VETLL-TLPDAIFL-NGI---TPLSDTQYLTADSYR--------GAIWLIDVVQPSGSIWLEHPMLARSNSESVF--PAA 171 (306)
T ss_dssp EEEEE-ECTTCSCE-EEE---EESSSSEEEEEETTT--------TEEEEEETTTTEEEEEEECGGGSCSSTTCCS--CSE
T ss_pred EEEEE-eCCCcccc-Ccc---cccCCCcEEEEECCC--------CeEEEEeCCCCcEeEEEECCccccccccCCC--CcC
Confidence 76554 33321111 000 223355666644322 4899999886532221 0 110111 011
Q ss_pred eEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeC
Q 016751 265 KYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 265 ~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~ 344 (383)
..+...++.||+...... .+..+.++..+.-........... ..-+++..+|.+|+. ..... .+..||+
T Consensus 172 ngis~dg~~lyv~d~~~~----~I~~~~~~~~g~~~~~~~~~~~~~----P~gi~vd~dG~l~va--~~~~~-~V~~~~~ 240 (306)
T 2p4o_A 172 NGLKRFGNFLYVSNTEKM----LLLRIPVDSTDKPGEPEIFVEQTN----IDDFAFDVEGNLYGA--THIYN-SVVRIAP 240 (306)
T ss_dssp EEEEEETTEEEEEETTTT----EEEEEEBCTTSCBCCCEEEEESCC----CSSEEEBTTCCEEEE--CBTTC-CEEEECT
T ss_pred CCcCcCCCEEEEEeCCCC----EEEEEEeCCCCCCCccEEEeccCC----CCCeEECCCCCEEEE--eCCCC-eEEEECC
Confidence 224334457888776543 554444442111111122222211 222566778899888 52234 4999999
Q ss_pred CCCeEEEE
Q 016751 345 HSDTFKCI 352 (383)
Q Consensus 345 ~t~~~~~v 352 (383)
+ ++...+
T Consensus 241 ~-G~~~~~ 247 (306)
T 2p4o_A 241 D-RSTTII 247 (306)
T ss_dssp T-CCEEEE
T ss_pred C-CCEEEE
Confidence 7 444443
No 126
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=76.76 E-value=35 Score=29.19 Aligned_cols=197 Identities=11% Similarity=0.019 Sum_probs=95.2
Q ss_pred CCceEEEEccCccceeecCCCC---CCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee-ccCCCceeee
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPS---LNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI-AYGFPRSIEI 206 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~---~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~-~~~~p~~~~~ 206 (383)
....++++||.+++...+..+. ......++.+++. .+ ++........+.+|+.. ++.+.+ . ........
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~g--~l~v~~~~~~l~~~d~~-g~~~~~~~-~~~~~~~~ 116 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD---AN--QLFVADMRLGLLVVQTD-GTFEEIAK-KDSEGRRM 116 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS---SS--EEEEEETTTEEEEEETT-SCEEECCS-BCTTSCBC
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC---CC--cEEEEECCCCEEEEeCC-CCEEEEEe-ccCCCccc
Confidence 3567999999998877654311 0011255666643 23 22222223478889988 766654 3 21111111
Q ss_pred ccCcccceeEE--CceEEEEEeeccC-------CCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-----CC
Q 016751 207 NRSHINSSVFL--NGSVHWCARFSCY-------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-----DG 272 (383)
Q Consensus 207 ~~~~~~~~v~~--~G~lYw~~~~~~~-------~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-----~g 272 (383)
.... .+.+ +|.+|+....... ........|..+|.. .++..+.-. .. ....++.. +|
T Consensus 117 ~~~~---~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~---~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 117 QGCN---DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ---FPNGIAVRHMNDGRP 187 (314)
T ss_dssp BCCC---EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES---SEEEEEEEECTTSCE
T ss_pred cCCc---CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CC---CcceEEEecccCCCC
Confidence 1111 3333 6888765532100 000112479999987 555443111 00 11123333 34
Q ss_pred -eEEEEEecCCCCccEEEEEEeccCCCCCCeEEE---EEecCCC-ceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 273 -YLCVFATIPNNTFRSYELWVMKEYGLTESWTKL---YTIEKPQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 273 -~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~---~~i~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
.|++..... ..+.+|.++.. ...... ..++... ....-+++..+|.+++. ...++ .+..||++++
T Consensus 188 ~~l~v~~~~~----~~i~~~~~~~~---g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~~~~~-~i~~~d~~~g 257 (314)
T 1pjx_A 188 YQLIVAETPT----KKLWSYDIKGP---AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSS-HIEVFGPDGG 257 (314)
T ss_dssp EEEEEEETTT----TEEEEEEEEET---TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTT-EEEEECTTCB
T ss_pred CEEEEEECCC----CeEEEEECCCC---CccccceEEEECCCCCCCCCCceEECCCCCEEEE--EcCCC-EEEEEcCCCC
Confidence 456655433 46777766531 223221 2222111 12333555667888887 52344 4999999965
Q ss_pred eE-EEEE
Q 016751 348 TF-KCIG 353 (383)
Q Consensus 348 ~~-~~v~ 353 (383)
+. ..+.
T Consensus 258 ~~~~~~~ 264 (314)
T 1pjx_A 258 QPKMRIR 264 (314)
T ss_dssp SCSEEEE
T ss_pred cEeEEEe
Confidence 43 3443
No 127
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=76.61 E-value=44 Score=30.32 Aligned_cols=195 Identities=11% Similarity=-0.003 Sum_probs=99.7
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~ 195 (383)
...+|.|.+.+. ...+++.+++..+....+-.... ....++.+|+. .+ +++.... ...+++++.....-+.
T Consensus 124 d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~---~g--~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 124 HHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWV---HD--KLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTSCCEEEEECSSC-SCCCCEEEETT---TT--EEEEEETTTTEEEECBTTSCSCEE
T ss_pred ecCCCeEEEEeC--CCCcEEEEecCCCCcEEEEeCCC-CCccEEEEEeC---CC--eEEEEcCCCCeEEEEeCCCCceEE
Confidence 346777877764 56688888888765444322111 01146777765 33 2222222 4466777765443222
Q ss_pred eccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--
Q 016751 196 IAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-- 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-- 270 (383)
+. .... .... ++.+ +|.|||..... ...|..+|+....-..+.-. ... ....|+..
T Consensus 196 l~-~~~l----~~P~---giavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~--~~~--~PnGlavd~~ 256 (386)
T 3v65_B 196 LL-WQSL----EKPR---AIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADT--HLF--WPNGLTIDYA 256 (386)
T ss_dssp EE-CSSC----SCEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECS--SCS--CEEEEEEEGG
T ss_pred ee-cCCC----CCCc---EEEEEcCCCeEEEeccCC-------CCEEEEEeCCCCCcEEEEEC--CCC--CeeeEEEeCC
Confidence 22 1110 0111 3433 58999976432 35899999976544333111 110 12235553
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCe-
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDT- 348 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~- 348 (383)
+|+||++..... .|+..+-.+. .. ..+..... ..|.++. .++.||+. . .+...+..+|..+++
T Consensus 257 ~~~lY~aD~~~~------~I~~~d~dG~-~~-~~~~~~~~----~~P~giav~~~~ly~t--d-~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 257 GRRMYWVDAKHH------VIERANLDGS-HR-KAVISQGL----PHPFAITVFEDSLYWT--D-WHTKSINSANKFTGKN 321 (386)
T ss_dssp GTEEEEEETTTT------EEEEECTTSC-SC-EEEECSSC----SSEEEEEEETTEEEEE--E-TTTTEEEEEETTTCCS
T ss_pred CCEEEEEECCCC------EEEEEeCCCC-ee-EEEEECCC----CCceEEEEECCEEEEe--e-CCCCeEEEEECCCCcc
Confidence 689999876543 4555553321 21 11111111 3344433 45678887 5 333359999966654
Q ss_pred EEEEE
Q 016751 349 FKCIG 353 (383)
Q Consensus 349 ~~~v~ 353 (383)
.+.+.
T Consensus 322 ~~~i~ 326 (386)
T 3v65_B 322 QEIIR 326 (386)
T ss_dssp CEEEE
T ss_pred eEEEc
Confidence 34443
No 128
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=76.60 E-value=45 Score=30.42 Aligned_cols=189 Identities=13% Similarity=0.175 Sum_probs=97.5
Q ss_pred eeEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 113 LDVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 113 ~~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
+..++-.+++++... .++.+.++|..+++...--.... .....+.+++. + ++.......+.+|+..++.
T Consensus 162 v~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~------~-l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 162 VWSSQMRDNIIISGS---TDRTLKVWNAETGECIHTLYGHT-STVRCMHLHEK------R-VVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp EEEEEEETTEEEEEE---TTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETT------E-EEEEETTSEEEEEESSSCC
T ss_pred EEEEEecCCEEEEEe---CCCeEEEEECCcCcEEEEECCCC-CcEEEEEecCC------E-EEEEeCCCEEEEEECCCCc
Confidence 333444455555554 67889999998876543211111 11133444322 2 3333336788999988764
Q ss_pred eeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEeC
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFD 271 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~~ 271 (383)
-...-....... . ++..+|.....+... ..|..+|+.+.+-.. +... . ....-...+
T Consensus 231 ~~~~~~~~~~~v-----~---~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~---~---~~v~~~~~~ 288 (445)
T 2ovr_B 231 CLHVLMGHVAAV-----R---CVQYDGRRVVSGAYD--------FMVKVWDPETETCLHTLQGH---T---NRVYSLQFD 288 (445)
T ss_dssp EEEEEECCSSCE-----E---EEEECSSCEEEEETT--------SCEEEEEGGGTEEEEEECCC---S---SCEEEEEEC
T ss_pred EEEEEcCCcccE-----E---EEEECCCEEEEEcCC--------CEEEEEECCCCcEeEEecCC---C---CceEEEEEC
Confidence 321110111111 1 455577666655544 578899987765422 2211 1 112222336
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
|...++...+ ..+.+|.+... ..+..+.... ..+.++..++..++. ...++ .+..||+++++.
T Consensus 289 ~~~l~~~~~d----~~i~i~d~~~~------~~~~~~~~~~--~~v~~~~~~~~~l~~--~~~dg-~i~vwd~~~~~~ 351 (445)
T 2ovr_B 289 GIHVVSGSLD----TSIRVWDVETG------NCIHTLTGHQ--SLTSGMELKDNILVS--GNADS-TVKIWDIKTGQC 351 (445)
T ss_dssp SSEEEEEETT----SCEEEEETTTC------CEEEEECCCC--SCEEEEEEETTEEEE--EETTS-CEEEEETTTCCE
T ss_pred CCEEEEEeCC----CeEEEEECCCC------CEEEEEcCCc--ccEEEEEEeCCEEEE--EeCCC-eEEEEECCCCcE
Confidence 6666666555 48999988752 2233333222 112222223555555 32455 499999988764
No 129
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=75.73 E-value=69 Score=32.09 Aligned_cols=194 Identities=10% Similarity=0.092 Sum_probs=99.9
Q ss_pred cCceEEEeecCCCCceEEEEccCccceeecCCCC-----CC-C--CceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcC
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPS-----LN-P--RYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLR 189 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~-----~~-~--~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~ 189 (383)
.+|.|-+.. ....++.++|.++.+..+...+ .. . ...++..|+. +. +.+.. ...+..|+..
T Consensus 322 ~~g~lWigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~---g~----lWigt~~~Gl~~~~~~ 391 (781)
T 3v9f_A 322 SFNNIWIGT---WGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ---GK----LWIGTDGGGINVFENG 391 (781)
T ss_dssp SSCCEEEEE---BSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT---SC----EEEEEBSSCEEEEETT
T ss_pred CCCCEEEEe---cCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC---CC----EEEEeCCCcEEEEECC
Confidence 345444433 2456788888887777664321 11 1 1144444543 21 22222 4567888887
Q ss_pred CCceeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEE
Q 016751 190 SNSWKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYL 267 (383)
Q Consensus 190 t~~W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l 267 (383)
++.++... . +.......-. +++. +|.+ |++... ..+..||..++++..+..+ . ........+
T Consensus 392 ~~~~~~~~-~-~~~~~~~~v~---~i~~d~~g~l-Wigt~~--------~Gl~~~~~~~~~~~~~~~~-~-~~~~~v~~i 455 (781)
T 3v9f_A 392 KRVAIYNK-E-NRELLSNSVL---CSLKDSEGNL-WFGTYL--------GNISYYNTRLKKFQIIELE-K-NELLDVRVF 455 (781)
T ss_dssp EEEEECC-------CCCSBEE---EEEECTTSCE-EEEETT--------EEEEEECSSSCEEEECCST-T-TCCCCEEEE
T ss_pred CCeEEEcc-C-CCCCCCcceE---EEEECCCCCE-EEEecc--------CCEEEEcCCCCcEEEeccC-C-CCCCeEEEE
Confidence 77666442 1 1110000000 3333 4655 555542 3799999999999877532 1 111123345
Q ss_pred EEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC---CceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 268 NVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP---QRIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 268 ~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
.+. +|.|.+... . . ++.++.. +..|......... ......+....+|.|++. . .+.. ++.||
T Consensus 456 ~~d~~g~lwigt~--~----G--l~~~~~~--~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig--t-~~~G-l~~~~ 521 (781)
T 3v9f_A 456 YEDKNKKIWIGTH--A----G--VFVIDLA--SKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG--T-FGGG-VGIYT 521 (781)
T ss_dssp EECTTSEEEEEET--T----E--EEEEESS--SSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE--E-SSSC-EEEEC
T ss_pred EECCCCCEEEEEC--C----c--eEEEeCC--CCeEEecccCcccccccceeEEEEEcCCCCEEEE--E-cCCC-EEEEe
Confidence 554 477777653 2 2 3333321 2346554432210 112444555667889887 6 4343 99999
Q ss_pred CCCCeEEEE
Q 016751 344 PHSDTFKCI 352 (383)
Q Consensus 344 ~~t~~~~~v 352 (383)
+++++++.+
T Consensus 522 ~~~~~~~~~ 530 (781)
T 3v9f_A 522 PDMQLVRKF 530 (781)
T ss_dssp TTCCEEEEE
T ss_pred CCCCeEEEc
Confidence 999988776
No 130
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=75.65 E-value=43 Score=29.68 Aligned_cols=177 Identities=11% Similarity=0.073 Sum_probs=89.8
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.+||..+++....-.... .....+.+.+. ...-.++.......+.+|+.+++.....-........
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h~-~~v~~~~~~~~---~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~----- 244 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGHG-ADVLCLDLAPS---ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN----- 244 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECCS-SCEEEEEECCC---SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-----
T ss_pred CCCcEEEEeCCCCeEEEEEcCCC-CCeEEEEEEeC---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE-----
Confidence 57789999998876543211110 11134555554 3333444444467899999988764322101111111
Q ss_pred ccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCcc
Q 016751 211 INSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFR 286 (383)
Q Consensus 211 ~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~ 286 (383)
++.+ +|.....+..+ ..|..+|+.+..-..+ ... .... ....+.-. +|++.+++..+ .
T Consensus 245 ---~v~~~p~~~~l~s~s~D--------~~v~lwd~~~~~~~~~~~~~-~~~~--~~~~~~~s~~g~~l~~g~~d----~ 306 (354)
T 2pbi_B 245 ---SVRYYPSGDAFASGSDD--------ATCRLYDLRADREVAIYSKE-SIIF--GASSVDFSLSGRLLFAGYND----Y 306 (354)
T ss_dssp ---EEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCT-TCCS--CEEEEEECTTSSEEEEEETT----S
T ss_pred ---EEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEEEEEcCC-Cccc--ceeEEEEeCCCCEEEEEECC----C
Confidence 2222 45554444433 5788899987653322 222 1110 11123322 46766666555 4
Q ss_pred EEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 287 SYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 287 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
.+.+|.+... ..+..+.-.......+++..+|..++. ...++ .+.++|
T Consensus 307 ~i~vwd~~~~------~~~~~l~~h~~~v~~l~~spdg~~l~s--gs~D~-~v~vW~ 354 (354)
T 2pbi_B 307 TINVWDVLKG------SRVSILFGHENRVSTLRVSPDGTAFCS--GSWDH-TLRVWA 354 (354)
T ss_dssp CEEEEETTTC------SEEEEECCCSSCEEEEEECTTSSCEEE--EETTS-EEEEEC
T ss_pred cEEEEECCCC------ceEEEEECCCCcEEEEEECCCCCEEEE--EcCCC-CEEecC
Confidence 8999987641 223333221113555677777876666 42455 366654
No 131
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=75.59 E-value=41 Score=29.37 Aligned_cols=190 Identities=10% Similarity=0.051 Sum_probs=91.9
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee-eecc
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK-NIAY 198 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~-~~~~ 198 (383)
|-+++... .++.+.|||..+++....-.+.... ....+.+.+. . . .++.......+.+++..++.-. .+.
T Consensus 48 ~~~l~tgs--~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~---~-~-~l~s~s~D~~i~lWd~~~~~~~~~~~- 119 (321)
T 3ow8_A 48 SETVVTGS--LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT---L-P-IAASSSLDAHIRLWDLENGKQIKSID- 119 (321)
T ss_dssp -CEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS---S-S-EEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred CCEEEEEc--CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC---C-C-EEEEEeCCCcEEEEECCCCCEEEEEe-
Confidence 43444432 5667778876655432211111111 1133444432 1 1 2222222668899998876432 222
Q ss_pred CCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-CCeEEE
Q 016751 199 GFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF-DGYLCV 276 (383)
Q Consensus 199 ~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~-~g~L~~ 276 (383)
.-+.... .. ...-+|.....+... ..|..||+.+..-... ... . . ....+.-. +|++.+
T Consensus 120 ~~~~~~~---~~---~~spdg~~l~~g~~d--------g~v~i~~~~~~~~~~~~~~~-~-~---~v~~~~~spdg~~la 180 (321)
T 3ow8_A 120 AGPVDAW---TL---AFSPDSQYLATGTHV--------GKVNIFGVESGKKEYSLDTR-G-K---FILSIAYSPDGKYLA 180 (321)
T ss_dssp CCTTCCC---CE---EECTTSSEEEEECTT--------SEEEEEETTTCSEEEEEECS-S-S---CEEEEEECTTSSEEE
T ss_pred CCCccEE---EE---EECCCCCEEEEEcCC--------CcEEEEEcCCCceeEEecCC-C-c---eEEEEEECCCCCEEE
Confidence 1111110 00 122245444433332 5788888876644322 211 1 1 11233333 366655
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 277 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 277 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
.+..+ ..+.+|-++.. ..+..+.........+.+..+|.+++. ...++ .+..||+++.+..
T Consensus 181 sg~~d----g~i~iwd~~~~------~~~~~~~~h~~~v~~l~~spd~~~l~s--~s~dg-~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 181 SGAID----GIINIFDIATG------KLLHTLEGHAMPIRSLTFSPDSQLLVT--ASDDG-YIKIYDVQHANLA 241 (321)
T ss_dssp EEETT----SCEEEEETTTT------EEEEEECCCSSCCCEEEECTTSCEEEE--ECTTS-CEEEEETTTCCEE
T ss_pred EEcCC----CeEEEEECCCC------cEEEEEcccCCceeEEEEcCCCCEEEE--EcCCC-eEEEEECCCccee
Confidence 55554 48999987641 334444422212445667777777776 42455 4999999887654
No 132
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=75.05 E-value=44 Score=30.20 Aligned_cols=75 Identities=8% Similarity=-0.031 Sum_probs=45.2
Q ss_pred CCeEEEEEecCCC---CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCC
Q 016751 271 DGYLCVFATIPNN---TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 271 ~g~L~~v~~~~~~---~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t 346 (383)
+++||+....... ....-.||+++- .....+.+|+... ....+.+..+|+ +++. ...+...+.+||.+|
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v--~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGH-DVDAISVAQDGGPDLYA--LSAGTEVLHIYDAGA 350 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCC-CcCeEEECCCCCeEEEE--EcCCCCeEEEEECCC
Confidence 3677776542110 001246888875 3467777887654 244466777787 6666 422223699999999
Q ss_pred CeEEEE
Q 016751 347 DTFKCI 352 (383)
Q Consensus 347 ~~~~~v 352 (383)
.+....
T Consensus 351 ~~vv~~ 356 (373)
T 2mad_H 351 GDQDQS 356 (373)
T ss_pred CCEEee
Confidence 886543
No 133
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=74.96 E-value=38 Score=28.71 Aligned_cols=189 Identities=13% Similarity=0.124 Sum_probs=91.0
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
.-.+++++... .++.+.++|.. +....+.... .....+.+.+. ..++ ++.......+.+|+.+... +..
T Consensus 111 ~~~~~~l~~~~---~d~~i~~~d~~-~~~~~~~~~~--~~v~~~~~~~~---~~~~-l~~~~~d~~i~i~d~~~~~-~~~ 179 (313)
T 3odt_A 111 SFQDGVVISGS---WDKTAKVWKEG-SLVYNLQAHN--ASVWDAKVVSF---SENK-FLTASADKTIKLWQNDKVI-KTF 179 (313)
T ss_dssp EEETTEEEEEE---TTSEEEEEETT-EEEEEEECCS--SCEEEEEEEET---TTTE-EEEEETTSCEEEEETTEEE-EEE
T ss_pred EecCCEEEEEe---CCCCEEEEcCC-cEEEecccCC--CceeEEEEccC---CCCE-EEEEECCCCEEEEecCceE-EEE
Confidence 33445555444 57788999822 1122222111 11234555553 3333 3333335678888833221 111
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCCCCCCceEEEEeC-CeE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLSTDDADKYLNVFD-GYL 274 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~~-g~L 274 (383)
.......... - ...-+|. ...+... ..|..||+.+.+-. .+... .. ....+.-.. |+
T Consensus 180 ~~~~~~~i~~---~---~~~~~~~-~~~~~~d--------g~i~i~d~~~~~~~~~~~~~-~~----~i~~~~~~~~~~- 238 (313)
T 3odt_A 180 SGIHNDVVRH---L---AVVDDGH-FISCSND--------GLIKLVDMHTGDVLRTYEGH-ES----FVYCIKLLPNGD- 238 (313)
T ss_dssp CSSCSSCEEE---E---EEEETTE-EEEEETT--------SEEEEEETTTCCEEEEEECC-SS----CEEEEEECTTSC-
T ss_pred eccCcccEEE---E---EEcCCCe-EEEccCC--------CeEEEEECCchhhhhhhhcC-Cc----eEEEEEEecCCC-
Confidence 1001111110 0 2344566 3333332 58999999866432 22222 11 122344443 44
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 275 CVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 275 ~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
.++...+ ..+.+|.++.. +-......... ....+.+..+|.++.. . .++. +..||++++++..
T Consensus 239 l~~~~~d----g~v~iwd~~~~----~~~~~~~~~~~--~i~~~~~~~~~~~~~~--~-~dg~-i~iw~~~~~~~~~ 301 (313)
T 3odt_A 239 IVSCGED----RTVRIWSKENG----SLKQVITLPAI--SIWSVDCMSNGDIIVG--S-SDNL-VRIFSQEKSRWAS 301 (313)
T ss_dssp EEEEETT----SEEEEECTTTC----CEEEEEECSSS--CEEEEEECTTSCEEEE--E-TTSC-EEEEESCGGGCCC
T ss_pred EEEEecC----CEEEEEECCCC----ceeEEEeccCc--eEEEEEEccCCCEEEE--e-CCCc-EEEEeCCCCceee
Confidence 3333333 58999988752 22222222222 2555666777776655 4 5664 9999999987643
No 134
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=74.30 E-value=49 Score=29.67 Aligned_cols=194 Identities=7% Similarity=0.027 Sum_probs=99.1
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce-ee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW-KN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W-~~ 195 (383)
.+.+|-+++... .++.+.+||..+++....-.... .....+.+.|. .. .++.......+.+|+.++++= +.
T Consensus 105 ~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~---~~--~l~s~s~d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 105 AKLQMRRFILGT--TEGDIKVLDSNFNLQREIDQAHV-SEITKLKFFPS---GE--ALISSSQDMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp ECSSSCEEEEEE--TTSCEEEECTTSCEEEEETTSSS-SCEEEEEECTT---SS--EEEEEETTSEEEEEETTTCCCCEE
T ss_pred EecCCCEEEEEE--CCCCEEEEeCCCcceeeeccccc-CccEEEEECCC---CC--EEEEEeCCCeEEEEeCCCCcCceE
Confidence 344555444432 57889999998887766532221 12255666664 32 333333366899999987532 11
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEE-----
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNV----- 269 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~----- 269 (383)
+. ......... ...-+|.....+..+ ..|..+|+.+.+-.. +..+ ..... ....+..
T Consensus 177 ~~-~h~~~v~~~------~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~-~~~~~-~v~~~~~~~~~~ 239 (420)
T 3vl1_A 177 LI-GHRATVTDI------AIIDRGRNVLSASLD--------GTIRLWECGTGTTIHTFNRK-ENPHD-GVNSIALFVGTD 239 (420)
T ss_dssp EE-CCSSCEEEE------EEETTTTEEEEEETT--------SCEEEEETTTTEEEEEECBT-TBTTC-CEEEEEEEECCC
T ss_pred Ec-CCCCcEEEE------EEcCCCCEEEEEcCC--------CcEEEeECCCCceeEEeecC-CCCCC-CccEEEEecCCc
Confidence 11 111111100 112245544444433 478889988765433 3332 11110 0111111
Q ss_pred -----------------eCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC-ceeEEEEEeeCCc-EEEEE
Q 016751 270 -----------------FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ-RIWWPLGFTERGK-IFIRG 330 (383)
Q Consensus 270 -----------------~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~g~-i~~~~ 330 (383)
-+|++.+++..+ ..+.+|.+... .....+.... .....+.+..+|. +++.
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~- 308 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVS----GVITVHNVFSK------EQTIQLPSKFTCSCNSLTVDGNNANYIYA- 308 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETT----SCEEEEETTTC------CEEEEECCTTSSCEEEEEECSSCTTEEEE-
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCC----CeEEEEECCCC------ceeEEcccccCCCceeEEEeCCCCCEEEE-
Confidence 245666655555 48999988652 1223332211 1355566666776 6666
Q ss_pred EeeCCceEEEEEeCCCCe
Q 016751 331 ECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 331 ~~~~~~~~~~~yd~~t~~ 348 (383)
...++ .+.+||+++++
T Consensus 309 -g~~dg-~i~vwd~~~~~ 324 (420)
T 3vl1_A 309 -GYENG-MLAQWDLRSPE 324 (420)
T ss_dssp -EETTS-EEEEEETTCTT
T ss_pred -EeCCC-eEEEEEcCCCc
Confidence 42455 49999999864
No 135
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=74.19 E-value=48 Score=29.57 Aligned_cols=188 Identities=11% Similarity=0.079 Sum_probs=94.3
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeecc
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAY 198 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~ 198 (383)
.+.|++.. ...+...++...+...+-+.. ....++.+|+. .+ +++.... ...+..++..+..-+.+.
T Consensus 44 ~~~ll~~~----~~~I~~i~~~g~~~~~~~~~~--~~~~~l~~d~~---~~--~ly~~D~~~~~I~r~~~~g~~~~~~~- 111 (349)
T 3v64_C 44 EPVLLFAN----RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR---RE--LVFWSDVTLDRILRANLNGSNVEEVV- 111 (349)
T ss_dssp CCEEEEEC----BSCEEEECTTSCCEEEEECSC--SCEEEEEEETT---TT--EEEEEETTTTEEEEEETTSCSCEEEE-
T ss_pred CceeEeec----ccceEEEeCCCCeeEEeecCC--CceEEEEEecc---cc--EEEEEeccCCceEEEecCCCCceEEE-
Confidence 34454443 345666676665544432211 12367777765 33 3333332 456777777765544432
Q ss_pred CCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCe
Q 016751 199 GFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGY 273 (383)
Q Consensus 199 ~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~ 273 (383)
..... ... ++.+ +|.|||..... ..|.++|+....-..+. . .... ....+++. +|.
T Consensus 112 ~~~~~----~p~---glavd~~~g~ly~~d~~~--------~~I~~~~~dG~~~~~l~-~-~~l~--~P~~iavdp~~g~ 172 (349)
T 3v64_C 112 STGLE----SPG---GLAVDWVHDKLYWTDSGT--------SRIEVANLDGAHRKVLL-W-QSLE--KPRAIALHPMEGT 172 (349)
T ss_dssp CSSCS----CCC---EEEEETTTTEEEEEETTT--------TEEEEEETTSCSCEEEE-C-TTCS--CEEEEEEETTTTE
T ss_pred eCCCC----Ccc---EEEEecCCCeEEEEcCCC--------CeEEEEcCCCCceEEEE-e-CCCC--CcceEEEecCcCe
Confidence 11100 111 3433 68999987654 58999999765443332 1 1111 12335554 578
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEE--EEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWP--LGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~--~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
||+..... .-.|++.+-.+. . .+ .+-... ...| +++. .++.||+. ..... .+..+|+.....+
T Consensus 173 ly~td~~~-----~~~I~r~~~dG~-~--~~--~~~~~~-~~~PnGla~d~~~~~lY~a--D~~~~-~I~~~~~dG~~~~ 238 (349)
T 3v64_C 173 IYWTDWGN-----TPRIEASSMDGS-G--RR--IIADTH-LFWPNGLTIDYAGRRMYWV--DAKHH-VIERANLDGSHRK 238 (349)
T ss_dssp EEEEECSS-----SCEEEEEETTSC-S--CE--ESCCSS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCE
T ss_pred EEEeccCC-----CCEEEEEeCCCC-C--cE--EEEECC-CCCcceEEEeCCCCEEEEE--ECCCC-EEEEEeCCCCceE
Confidence 88876543 134556554321 1 11 111111 1334 4444 35678887 41233 5888888765444
Q ss_pred EE
Q 016751 351 CI 352 (383)
Q Consensus 351 ~v 352 (383)
.+
T Consensus 239 ~~ 240 (349)
T 3v64_C 239 AV 240 (349)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 136
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=74.19 E-value=44 Score=29.10 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=73.7
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC---CceeeeccCCCceeeecc
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS---NSWKNIAYGFPRSIEINR 208 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t---~~W~~~~~~~p~~~~~~~ 208 (383)
...++++||.+++...+..... ...++.+++. . .+-.|.-.....+.+|+..+ +..+... ..+. +
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~--~p~gia~~~d---g-~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P---- 231 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELH--VPGGAEVSAD---S-SFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-P---- 231 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEES--CCCEEEECTT---S-SEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-E----
T ss_pred CceEEEEeCCCCEEEEeccCCc--cCcceEECCC---C-CEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-C----
Confidence 3678999998877554422111 1135566553 2 22222211256888998875 3444443 2222 1
Q ss_pred CcccceeE--ECceEEEEEeeccCC--CCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCC
Q 016751 209 SHINSSVF--LNGSVHWCARFSCYH--DNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNT 284 (383)
Q Consensus 209 ~~~~~~v~--~~G~lYw~~~~~~~~--~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~ 284 (383)
. ++. -+|.+|......... .......|..||...+....+..| ..........++..+|+|++.....
T Consensus 232 -~---gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~-~g~~~~~~~~~~~~~g~L~v~~~~~--- 303 (322)
T 2fp8_A 232 -G---NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP-PPFAGEHFEQIQEHDGLLYIGTLFH--- 303 (322)
T ss_dssp -E---EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC-TTTTTSCCCEEEEETTEEEEECSSC---
T ss_pred -C---CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC-CCCccccceEEEEeCCEEEEeecCC---
Confidence 1 333 358866554330000 000024799999987777777777 5431112233455678998876544
Q ss_pred ccEEEEEEecc
Q 016751 285 FRSYELWVMKE 295 (383)
Q Consensus 285 ~~~l~iW~l~~ 295 (383)
..+.+..++.
T Consensus 304 -~~i~~~~~~~ 313 (322)
T 2fp8_A 304 -GSVGILVYDK 313 (322)
T ss_dssp -SEEEEEEC--
T ss_pred -CceEEEeccc
Confidence 3565555543
No 137
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=73.61 E-value=72 Score=31.30 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=88.2
Q ss_pred CCceEEEEccCccceeecCCCCCCC-C-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeecc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNP-R-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINR 208 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~-~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~ 208 (383)
.++.+.|||...+....+......+ . ...+.+.+. ...-.++.......+.+|+.+++.-...-..........
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v- 567 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN---TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTV- 567 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC---SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-
T ss_pred CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC---CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE-
Confidence 4567788887655444443322221 1 245566654 433344444446789999998764332210111111100
Q ss_pred CcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEE
Q 016751 209 SHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSY 288 (383)
Q Consensus 209 ~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l 288 (383)
...-+|.+...+..+ ..|..+|+.+.+-.. .+. ... ....+.-..+...++...+ ..+
T Consensus 568 -----~~spdg~~l~sg~~D--------g~i~iwd~~~~~~~~-~~~-~~~---~v~~~~~sp~~~~l~~~~~----~~i 625 (694)
T 3dm0_A 568 -----AVSPDGSLCASGGKD--------GVVLLWDLAEGKKLY-SLE-ANS---VIHALCFSPNRYWLCAATE----HGI 625 (694)
T ss_dssp -----EECTTSSEEEEEETT--------SBCEEEETTTTEEEE-CCB-CSS---CEEEEEECSSSSEEEEEET----TEE
T ss_pred -----EEeCCCCEEEEEeCC--------CeEEEEECCCCceEE-Eec-CCC---cEEEEEEcCCCcEEEEEcC----CCE
Confidence 222256655544433 578899998775322 222 111 1223444444434444444 368
Q ss_pred EEEEeccCCCCCCeEEEEEecCC------------------C-ceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 016751 289 ELWVMKEYGLTESWTKLYTIEKP------------------Q-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 289 ~iW~l~~~~~~~~W~~~~~i~~~------------------~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~ 345 (383)
.||.++.. ..+..+... . ..+..+.+..+|..++. ...++ .+.++|+.
T Consensus 626 ~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s--gs~Dg-~i~iW~i~ 692 (694)
T 3dm0_A 626 KIWDLESK------SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS--GYTDG-VIRVWGIG 692 (694)
T ss_dssp EEEETTTT------EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE--EETTS-EEEEEEC-
T ss_pred EEEECCCC------CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE--EcCCC-eEEEEecc
Confidence 89987641 111111110 0 02344566678877777 43455 48888875
No 138
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=73.02 E-value=18 Score=36.21 Aligned_cols=194 Identities=10% Similarity=0.058 Sum_probs=88.9
Q ss_pred EccCceEEEeecCCCCceEEEEccCc----cc-eeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCC
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLI----KK-YMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRS 190 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t----~~-~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t 190 (383)
...+|.|.+.+. ....+++.++.+ .. ...++... ....++.+|.. .+. |++... ...+.+++...
T Consensus 414 d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~--~~P~glavD~~---~g~--LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 414 EVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWI---HSN--IYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp ETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC----CCCEECCCS---SSB--CEECCTTTSCEEEEBSSS
T ss_pred ccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCC--CCcceEEEEee---CCc--EEEEeccCCeEEEEecCC
Confidence 444666666653 445677777654 11 11111100 01145566644 322 221111 34677777765
Q ss_pred CceeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEE
Q 016751 191 NSWKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYL 267 (383)
Q Consensus 191 ~~W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l 267 (383)
..=+.+. .... .... ++.+ +|.|||..... ...|..+++.......+... . .. ....|
T Consensus 485 ~~~~~l~-~~~~----~~P~---giavDp~~g~ly~td~~~-------~~~I~~~~~dG~~~~~l~~~-~-l~--~PnGl 545 (699)
T 1n7d_A 485 VKRKTLF-REQG----SKPR---AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTE-N-IQ--WPNGI 545 (699)
T ss_dssp CCEEEEC-CCSS----CCCC---CEECCSSSSCCEECCCSS-------SCCEEBCCSSSCCCCEESCS-S-CS--SCCCE
T ss_pred CceEEEE-eCCC----CCcc---eEEEccCCCcEEEcccCC-------CCeEEEEeCCCCCeeEEEeC-C-CC--CccEE
Confidence 4333332 1110 0111 4444 68999965321 24788888765443333111 0 10 11224
Q ss_pred EEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeC
Q 016751 268 NVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 268 ~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~ 344 (383)
+.. +++||++..... . |++++-.+. .. ..+..... . ...|.++. ..+.||+. . .....|..+|+
T Consensus 546 avd~~~~~LY~aD~~~~----~--I~~~d~dG~-~~-~~~~~~~~-~-~~~P~glavd~~~lywt--d-~~~~~V~~~d~ 612 (699)
T 1n7d_A 546 TLDLLSGRLYWVDSKLH----S--ISSIDVNGG-NR-KTILEDEK-R-LAHPFSLAVFEDKVFWT--D-IINEAIFSANR 612 (699)
T ss_dssp EECTTTCCEEEEETTTT----E--EEEECSSSS-CC-EEECCCSS-S-CSSCCCCEEETTEEEEE--C-STTTCEEEEET
T ss_pred EEeccCCEEEEEecCCC----e--EEEEccCCC-ce-EEEEecCC-c-CCCceEeEEECCEEEEE--e-CCCCeEEEEEc
Confidence 443 588998875443 3 444443221 11 11111111 1 12333332 34467777 4 33225999999
Q ss_pred CCCeEEE
Q 016751 345 HSDTFKC 351 (383)
Q Consensus 345 ~t~~~~~ 351 (383)
.+++...
T Consensus 613 ~~G~~~~ 619 (699)
T 1n7d_A 613 LTGSDVN 619 (699)
T ss_dssp TTEEEEE
T ss_pred cCCCceE
Confidence 8877554
No 139
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.87 E-value=56 Score=29.77 Aligned_cols=187 Identities=7% Similarity=0.056 Sum_probs=89.8
Q ss_pred CCceEEEEccCccce--eecCCC---CCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc-eeeecc--CCC
Q 016751 131 DRSLIYLWNPLIKKY--MTLPRP---SLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-WKNIAY--GFP 201 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~--~~LP~~---~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-W~~~~~--~~p 201 (383)
.++.+.++|..++.. ..+.+. .... ....+.+.+. . ...++.......+.+|+.+++. .+.+.. ...
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---~-~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL---H-ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS---C-TTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC---C-CCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 577888998876221 111111 1111 1255666664 3 3334443346789999998752 211110 011
Q ss_pred ceeeeccCcccceeEE--Cce-EEEEEeeccCCCCCCCcEEEEEECCCCe--eeEeCCCCCCCCCCCceEEEEeC-C-eE
Q 016751 202 RSIEINRSHINSSVFL--NGS-VHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLNVFD-G-YL 274 (383)
Q Consensus 202 ~~~~~~~~~~~~~v~~--~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~~~~~~~~~l~~~~-g-~L 274 (383)
.... ++.+ +|. ++..+... ..|..||+.+.. ...+... .. ....+.-.. | .+
T Consensus 278 ~~v~--------~i~~~p~~~~~l~tg~~d--------g~v~vwd~~~~~~~~~~~~~h-~~----~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 278 AEVN--------CLSFNPYSEFILATGSAD--------KTVALWDLRNLKLKLHSFESH-KD----EIFQVQWSPHNETI 336 (430)
T ss_dssp SCEE--------EEEECSSCTTEEEEEETT--------SEEEEEETTCTTSCSEEEECC-SS----CEEEEEECSSCTTE
T ss_pred CCeE--------EEEeCCCCCCEEEEEeCC--------CeEEEEeCCCCCCCeEEeecC-CC----CEEEEEECCCCCCE
Confidence 1110 2222 243 55555443 589999998632 2222211 10 112233332 4 45
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCC--------CeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCC
Q 016751 275 CVFATIPNNTFRSYELWVMKEYGLTE--------SWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 275 ~~v~~~~~~~~~~l~iW~l~~~~~~~--------~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~ 345 (383)
++....+ ..+.||.+...+... .-..+............+.+..++. +++. ...++ .+.+|++.
T Consensus 337 l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s--~s~dg-~i~iw~~~ 409 (430)
T 2xyi_A 337 LASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICS--VSEDN-IMQVWQMA 409 (430)
T ss_dssp EEEEETT----SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEE--EETTS-EEEEEEEC
T ss_pred EEEEeCC----CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEE--EECCC-CEEEeEcc
Confidence 5555555 489999997632110 0122223222111245566666676 6665 42455 48888887
Q ss_pred CCeE
Q 016751 346 SDTF 349 (383)
Q Consensus 346 t~~~ 349 (383)
++.+
T Consensus 410 ~~~~ 413 (430)
T 2xyi_A 410 ENVY 413 (430)
T ss_dssp HHHH
T ss_pred cccc
Confidence 6544
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=72.26 E-value=50 Score=28.91 Aligned_cols=177 Identities=13% Similarity=0.113 Sum_probs=88.2
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.+||..+++....-.... .....+.+.|. + . .++.......+.+|+.+++.-...-..........
T Consensus 162 ~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~---~-~-~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v--- 232 (340)
T 1got_B 162 GDTTCALWDIETGQQTTTFTGHT-GDVMSLSLAPD---T-R-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAI--- 232 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTT---S-S-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE---
T ss_pred CCCcEEEEECCCCcEEEEEcCCC-CceEEEEECCC---C-C-EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEE---
Confidence 57788999988876543211111 11245556554 2 2 33333336688999988764322110111111100
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSY 288 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l 288 (383)
...-+|.....+..+ ..|..+|+.+..-.. +..+ .... ....+.-. +|++.+++..+ ..+
T Consensus 233 ---~~~p~~~~l~s~s~d--------~~v~iwd~~~~~~~~~~~~~-~~~~--~v~~~~~s~~g~~l~~g~~d----~~i 294 (340)
T 1got_B 233 ---CFFPNGNAFATGSDD--------ATCRLFDLRADQELMTYSHD-NIIC--GITSVSFSKSGRLLLAGYDD----FNC 294 (340)
T ss_dssp ---EECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCT-TCCS--CEEEEEECTTSSEEEEEETT----SEE
T ss_pred ---EEcCCCCEEEEEcCC--------CcEEEEECCCCcEEEEEccC-Cccc--ceEEEEECCCCCEEEEECCC----CeE
Confidence 112246555444433 578899998765322 2322 2111 11223333 46666666655 489
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 289 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 289 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
.+|.+... .....+.-.......+++..+|..++. ...++. +..+|
T Consensus 295 ~vwd~~~~------~~~~~~~~h~~~v~~~~~s~dg~~l~s--~s~D~~-i~iWd 340 (340)
T 1got_B 295 NVWDALKA------DRAGVLAGHDNRVSCLGVTDDGMAVAT--GSWDSF-LKIWN 340 (340)
T ss_dssp EEEETTTC------CEEEEEECCSSCEEEEEECTTSSCEEE--EETTSC-EEEEC
T ss_pred EEEEcccC------cEeeEeecCCCcEEEEEEcCCCCEEEE--EcCCcc-EEecC
Confidence 99987642 233334322113555666777766665 324443 66554
No 141
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=72.11 E-value=53 Score=29.10 Aligned_cols=194 Identities=11% Similarity=0.112 Sum_probs=94.0
Q ss_pred ceEEEeecCCCCceEEEEccCccc-------eeecCCCCCCCCceeEEEeccCCCCCC---eEEEEEEecCeEEEEEcCC
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKK-------YMTLPRPSLNPRYLGFGVNSVSGHLDD---FKVVTISVNADAEVYSLRS 190 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~-------~~~LP~~~~~~~~~~~g~d~~~~~~~~---ykVv~~~~~~~~~vyss~t 190 (383)
.+|+... .++.+.|||..+++ ...+..-. .....+.+.+... .+. -.++.......+.+|+..+
T Consensus 27 ~~l~s~~---~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~-~~g~~~~~l~s~~~dg~i~iw~~~~ 100 (397)
T 1sq9_A 27 SFTVSCS---GDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIE-RDAFELCLVATTSFSGDLLFYRITR 100 (397)
T ss_dssp SEEEEEE---TTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEE-TTTEEEEEEEEEETTSCEEEEEEEE
T ss_pred CeEEEEc---CCCEEEEEECCCcccccCCCcceEEecCC--CcEEEEEEecccc-cCCccccEEEEEcCCCCEEEEEccC
Confidence 4444444 57788888888776 33332111 1113333332100 112 3344434366889999887
Q ss_pred Cc------eeeeccCCC-----ceeeeccCcccceeE----ECceE-EEEEeeccCCCCCCCcEEEEEECCC------C-
Q 016751 191 NS------WKNIAYGFP-----RSIEINRSHINSSVF----LNGSV-HWCARFSCYHDNSCPWLIVSFDFAK------E- 247 (383)
Q Consensus 191 ~~------W~~~~~~~p-----~~~~~~~~~~~~~v~----~~G~l-Yw~~~~~~~~~~~~~~~il~fD~~~------~- 247 (383)
+. ++... ..+ ...... ... -+|.. ...+... ..|..+|+.+ .
T Consensus 101 ~~~~~~~~~~~~~-~~~~~~~~~~v~~~------~~~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 101 EDETKKVIFEKLD-LLDSDMKKHSFWAL------KWGASNDRLLSHRLVATDVK--------GTTYIWKFHPFADESNSL 165 (397)
T ss_dssp CTTTCCEEEEEEC-CSCTTGGGSCEEEE------EEECCC----CEEEEEEETT--------SCEEEEEEESSSSHHHHT
T ss_pred Ccccccccceeec-ccccccCCCcEEEE------EEeeccCCCCceEEEEEeCC--------CcEEEEeCCccccccccc
Confidence 65 66665 322 111100 122 24655 4444333 4688888776 2
Q ss_pred eee-----EeC----CCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC---C---C
Q 016751 248 IFQ-----TVM----MPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK---P---Q 312 (383)
Q Consensus 248 ~~~-----~i~----lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~---~---~ 312 (383)
... .+. .+ . ........+....+. .++.+... ..+.+|.+... ..+..+.. . .
T Consensus 166 ~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~~------~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESP-M-TPSQFATSVDISERG-LIATGFNN---GTVQISELSTL------RPLYNFESQHSMINNS 233 (397)
T ss_dssp TTCCCCEEEEEEEECCS-S-SSCCCCCEEEECTTS-EEEEECTT---SEEEEEETTTT------EEEEEEECCC---CCC
T ss_pred eeeccCcceeeeeeccc-c-CCCCCceEEEECCCc-eEEEEeCC---CcEEEEECCCC------ceeEEEeccccccccC
Confidence 212 221 11 0 011122334444433 44444443 58999988751 23333332 1 1
Q ss_pred ceeEEEEEeeCCcEEEEEEeeCC---ceEEEEEeCCCCeEE
Q 016751 313 RIWWPLGFTERGKIFIRGECRHG---GYGLLVYNPHSDTFK 350 (383)
Q Consensus 313 ~~~~~~~~~~~g~i~~~~~~~~~---~~~~~~yd~~t~~~~ 350 (383)
.....+.+..++.+++. ...+ + .+..||+++++..
T Consensus 234 ~~i~~i~~~~~~~~l~~--~~~d~~~g-~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAI--AHDSNSFG-CITLYETEFGERI 271 (397)
T ss_dssp CCEEEEEECSSTTEEEE--EEEETTEE-EEEEEETTTCCEE
T ss_pred CccceEEECCCCCEEEE--EecCCCCc-eEEEEECCCCccc
Confidence 13555666677777776 3233 4 5999999987643
No 142
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.10 E-value=59 Score=29.64 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=74.8
Q ss_pred eeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC---ceeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCC
Q 016751 158 LGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN---SWKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYH 231 (383)
Q Consensus 158 ~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~---~W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~ 231 (383)
.++.+.+. ... .++.......+.+|+..++ .+.... ......+... -.++.+ ++.+...+...
T Consensus 185 ~~l~~~~~---~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~h~~~-v~~v~~~p~~~~~l~s~~~d--- 253 (430)
T 2xyi_A 185 YGLSWNPN---LNG-YLLSASDDHTICLWDINATPKEHRVIDA---KNIFTGHTAV-VEDVAWHLLHESLFGSVADD--- 253 (430)
T ss_dssp CCEEECTT---STT-EEEEECTTSCEEEEETTSCCBGGGEEEC---SEEECCCSSC-EEEEEECSSCTTEEEEEETT---
T ss_pred EEEEeCCC---CCC-eEEEEeCCCeEEEEeCCCCCCCCceecc---ceeecCCCCC-EeeeEEeCCCCCEEEEEeCC---
Confidence 56667665 332 3444333668999999873 222111 0000000000 002222 34555544433
Q ss_pred CCCCCcEEEEEECCCCe----eeEeCCCCCCCCCCCceEEEEeC-Ce-EEEEEecCCCCccEEEEEEeccCCCCCCeEEE
Q 016751 232 DNSCPWLIVSFDFAKEI----FQTVMMPYDLSTDDADKYLNVFD-GY-LCVFATIPNNTFRSYELWVMKEYGLTESWTKL 305 (383)
Q Consensus 232 ~~~~~~~il~fD~~~~~----~~~i~lP~~~~~~~~~~~l~~~~-g~-L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 305 (383)
..|..||+.+.. ...+... .. ....+.-.. |. +++++..+ ..+.+|-+..... .+
T Consensus 254 -----g~i~i~d~~~~~~~~~~~~~~~~--~~---~v~~i~~~p~~~~~l~tg~~d----g~v~vwd~~~~~~-----~~ 314 (430)
T 2xyi_A 254 -----QKLMIWDTRNNNTSKPSHTVDAH--TA---EVNCLSFNPYSEFILATGSAD----KTVALWDLRNLKL-----KL 314 (430)
T ss_dssp -----SEEEEEETTCSCSSSCSEEEECC--SS---CEEEEEECSSCTTEEEEEETT----SEEEEEETTCTTS-----CS
T ss_pred -----CeEEEEECCCCCCCcceeEeecC--CC---CeEEEEeCCCCCCEEEEEeCC----CeEEEEeCCCCCC-----Ce
Confidence 589999998752 1222111 11 112233332 43 56666555 4899999875321 11
Q ss_pred EEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCC
Q 016751 306 YTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 306 ~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t 346 (383)
..+.........+.+..++ .+++. ...++ .+.+||+.+
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~~~l~s--~~~d~-~i~iwd~~~ 353 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNETILAS--SGTDR-RLHVWDLSK 353 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEE--EETTS-CCEEEEGGG
T ss_pred EEeecCCCCEEEEEECCCCCCEEEE--EeCCC-cEEEEeCCC
Confidence 2222111124445555656 45655 42455 388888876
No 143
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.06 E-value=26 Score=33.95 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=59.4
Q ss_pred eeEECceEEEEEe-eccCCCCCCCcEEEEEEC-CC--CeeeEeCCCCCC-------CCCCCceEEEEeCCeEEEEEecCC
Q 016751 214 SVFLNGSVHWCAR-FSCYHDNSCPWLIVSFDF-AK--EIFQTVMMPYDL-------STDDADKYLNVFDGYLCVFATIPN 282 (383)
Q Consensus 214 ~v~~~G~lYw~~~-~~~~~~~~~~~~il~fD~-~~--~~~~~i~lP~~~-------~~~~~~~~l~~~~g~L~~v~~~~~ 282 (383)
++..+|.+|.... .. .+.++|. .+ ..|+.- ++ .. +.+.....++..+|+|++....
T Consensus 58 P~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~~W~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 58 PLVIGDMMYVHSAFPN---------NTYALNLNDPGKIVWQHK-PK-QDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp CEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEEC-CC-CCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred cEEECCEEEEEeCCCC---------EEEEEeCCCCccEEEEEc-CC-CCccccccccccccccccEEECCEEEEEeCC--
Confidence 7889999998765 33 7999998 54 466542 22 11 1000112244567777665422
Q ss_pred CCccEEEEEEeccCCCCCCeEEEEEec-CC-CceeEEEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEE
Q 016751 283 NTFRSYELWVMKEYGLTESWTKLYTIE-KP-QRIWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 283 ~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~-~~~~~~~~~~~~g~i~~~~~~~~-----~~~~~~~yd~~t~~~~~ 351 (383)
.. +..++....+..|.....-. .. .....|+- .+|.||+. ... ++ .++.||.+|++...
T Consensus 125 ---g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 ---GH--LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMG--CSGAELGVRG-AVNAFDLKTGELKW 190 (571)
T ss_dssp ---SE--EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEE--CBCGGGTCCC-EEEEEETTTCCEEE
T ss_pred ---CE--EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEE--ecCCccCCCC-EEEEEECCCCcEEE
Confidence 13 33343222234576532110 00 00122222 35667766 411 34 59999999987553
No 144
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=72.00 E-value=45 Score=28.31 Aligned_cols=66 Identities=12% Similarity=0.224 Sum_probs=40.7
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCC-ceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPR-YLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~-~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
|.+|+|.... ++.+.|||..|++...+-....... ...+.+.+. +.+- +.......+.+++.++++
T Consensus 34 S~~~~lAvg~----D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~----~~~l-~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 34 SSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE----GNYL-AVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT----SSEE-EEEETTSEEEEEETTTTE
T ss_pred CCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC----CCEE-EEEECCCcEEEeecCCce
Confidence 6677665443 5789999999998766433332222 255666654 2333 332336688999998874
No 145
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=71.95 E-value=78 Score=31.02 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=98.5
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc-e
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-W 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-W 193 (383)
+.-+.+|-+++... .++.+.|||..+++....-.. +......+.+.+. + . .++.......+.+++..... .
T Consensus 436 v~~s~~g~~l~sgs--~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~---~-~-~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 436 VVLSSDGQFALSGS--WDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLD---N-R-QIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTT---S-S-CEEEEETTSCEEEECTTSCEEE
T ss_pred EEECCCCCEEEEEe--CCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCC---C-C-EEEEEeCCCEEEEEECCCCcce
Confidence 34455666655553 678899999988765432111 1111245555554 2 2 23333335677888765432 2
Q ss_pred eeeccCCCceeeeccCcccceeEE--Cc--eEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEE
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL--NG--SVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV 269 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~--~G--~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~ 269 (383)
.... .......... ++.+ +| .....+.. ...|..+|+.+.+....- . .+.. ....+..
T Consensus 508 ~~~~-~~~~h~~~v~-----~~~~~~~~~~~~l~s~s~--------d~~v~vwd~~~~~~~~~~-~-~h~~--~v~~v~~ 569 (694)
T 3dm0_A 508 TISE-GGEGHRDWVS-----CVRFSPNTLQPTIVSASW--------DKTVKVWNLSNCKLRSTL-A-GHTG--YVSTVAV 569 (694)
T ss_dssp EECS-STTSCSSCEE-----EEEECSCSSSCEEEEEET--------TSCEEEEETTTCCEEEEE-C-CCSS--CEEEEEE
T ss_pred eecc-CCCCCCCcEE-----EEEEeCCCCcceEEEEeC--------CCeEEEEECCCCcEEEEE-c-CCCC--CEEEEEE
Confidence 2111 1000000000 1221 22 12222222 247888999876553321 1 1110 1223444
Q ss_pred e-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 270 F-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 270 ~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
. +|++.+.+..+ ..+.+|.+... ..+..+.... ....+++..++.++.. . .+.. +.++|+++++
T Consensus 570 spdg~~l~sg~~D----g~i~iwd~~~~------~~~~~~~~~~-~v~~~~~sp~~~~l~~--~-~~~~-i~iwd~~~~~ 634 (694)
T 3dm0_A 570 SPDGSLCASGGKD----GVVLLWDLAEG------KKLYSLEANS-VIHALCFSPNRYWLCA--A-TEHG-IKIWDLESKS 634 (694)
T ss_dssp CTTSSEEEEEETT----SBCEEEETTTT------EEEECCBCSS-CEEEEEECSSSSEEEE--E-ETTE-EEEEETTTTE
T ss_pred eCCCCEEEEEeCC----CeEEEEECCCC------ceEEEecCCC-cEEEEEEcCCCcEEEE--E-cCCC-EEEEECCCCC
Confidence 4 46666655555 48999988752 2333443332 3555677777777776 5 4553 9999999987
Q ss_pred EE
Q 016751 349 FK 350 (383)
Q Consensus 349 ~~ 350 (383)
..
T Consensus 635 ~~ 636 (694)
T 3dm0_A 635 IV 636 (694)
T ss_dssp EE
T ss_pred Ch
Confidence 54
No 146
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=71.84 E-value=47 Score=28.42 Aligned_cols=194 Identities=14% Similarity=0.112 Sum_probs=96.3
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
+.+|-+++... .++.+.+||..+++....-.... .....+.+.+. + . .++.......+.+|+.+++.-...-
T Consensus 32 s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~---~-~-~l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 32 SPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSD---S-N-LLVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp CTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTT---S-S-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEee--CCCeEEEEeCCCcccchhhccCC-CceEEEEEcCC---C-C-EEEEECCCCEEEEEECCCCcEEEEE
Confidence 34454444432 56778888887776554322111 11245566554 2 2 2333333668899998876432111
Q ss_pred cCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEE
Q 016751 198 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCV 276 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~ 276 (383)
.......... ...-+|.+...+..+ ..|..+|+.+.+-... ++ .... ....+.-. +|.+.+
T Consensus 104 ~~~~~~v~~~------~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~-~~-~~~~--~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 104 KGHSNYVFCC------NFNPQSNLIVSGSFD--------ESVRIWDVKTGKCLKT-LP-AHSD--PVSAVHFNRDGSLIV 165 (312)
T ss_dssp ECCSSCEEEE------EECSSSSEEEEEETT--------SCEEEEETTTCCEEEE-EC-CCSS--CEEEEEECTTSSEEE
T ss_pred cCCCCCEEEE------EEcCCCCEEEEEeCC--------CcEEEEECCCCEEEEE-ec-CCCC--cEEEEEEcCCCCEEE
Confidence 0111000000 111234444333332 4788999987654222 22 1111 11223332 466666
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC-ceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 277 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ-RIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 277 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
....+ ..+.+|.+... .....+.... .....+.+..+|..++. ...++ .+..||+++++..
T Consensus 166 ~~~~d----~~i~~wd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~d~-~i~iwd~~~~~~~ 227 (312)
T 4ery_A 166 SSSYD----GLCRIWDTASG------QCLKTLIDDDNPPVSFVKFSPNGKYILA--ATLDN-TLKLWDYSKGKCL 227 (312)
T ss_dssp EEETT----SCEEEEETTTC------CEEEEECCSSCCCEEEEEECTTSSEEEE--EETTT-EEEEEETTTTEEE
T ss_pred EEeCC----CcEEEEECCCC------ceeeEEeccCCCceEEEEECCCCCEEEE--EcCCC-eEEEEECCCCcEE
Confidence 55555 48999988652 1222222111 12444666677776666 43455 4999999988754
No 147
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=71.61 E-value=50 Score=28.68 Aligned_cols=195 Identities=9% Similarity=0.080 Sum_probs=97.6
Q ss_pred CCceEEEEccCccceeecCCCCCC------------------CCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLN------------------PRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~------------------~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
....++.+||.+++...+...... ....++.+++. .+ +++.......+.+|+..++.
T Consensus 38 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~---~g--~l~v~d~~~~i~~~d~~~g~ 112 (322)
T 2fp8_A 38 QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ---NN--QLYIVDCYYHLSVVGSEGGH 112 (322)
T ss_dssp TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT---TT--EEEEEETTTEEEEECTTCEE
T ss_pred CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC---CC--cEEEEECCCCEEEEeCCCCE
Confidence 456788888887765544321100 01256777753 22 23332223457778877766
Q ss_pred eeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCC---------CCCCCcEEEEEECCCCeeeEe----CCCC
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYH---------DNSCPWLIVSFDFAKEIFQTV----MMPY 256 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~---------~~~~~~~il~fD~~~~~~~~i----~lP~ 256 (383)
.+.+. ............ .+.+ +|.+|+........ .......+..||..+.+...+ ..|
T Consensus 113 ~~~~~-~~~~~~~~~~p~---~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p- 187 (322)
T 2fp8_A 113 ATQLA-TSVDGVPFKWLY---AVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP- 187 (322)
T ss_dssp CEEEE-SEETTEECSCEE---EEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC-
T ss_pred EEEec-ccCCCCcccccc---eEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC-
Confidence 65543 211111111111 3333 68888865431000 011235799999988776544 333
Q ss_pred CCCCCCCceEEEEe-CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeC
Q 016751 257 DLSTDDADKYLNVF-DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRH 334 (383)
Q Consensus 257 ~~~~~~~~~~l~~~-~g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~ 334 (383)
..++.. +| .|++...... .+.++.++.. ..........++ . ..-+++..+|.|++. . .
T Consensus 188 --------~gia~~~dg~~lyv~d~~~~----~I~~~~~~~~-~~~~~~~~~~~~--g--P~gi~~d~~G~l~va--~-~ 247 (322)
T 2fp8_A 188 --------GGAEVSADSSFVLVAEFLSH----QIVKYWLEGP-KKGTAEVLVKIP--N--PGNIKRNADGHFWVS--S-S 247 (322)
T ss_dssp --------CEEEECTTSSEEEEEEGGGT----EEEEEESSST-TTTCEEEEEECS--S--EEEEEECTTSCEEEE--E-E
T ss_pred --------cceEECCCCCEEEEEeCCCC----eEEEEECCCC-cCCccceEEeCC--C--CCCeEECCCCCEEEE--e-c
Confidence 124443 34 4777765433 4444333321 112344333321 1 222445567888888 4 2
Q ss_pred C----------ceEEEEEeCCCCeEEEEEEe
Q 016751 335 G----------GYGLLVYNPHSDTFKCIGVH 355 (383)
Q Consensus 335 ~----------~~~~~~yd~~t~~~~~v~~~ 355 (383)
. ...+..||++.+..+.+...
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 2 12599999987666666543
No 148
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=71.56 E-value=55 Score=29.13 Aligned_cols=201 Identities=10% Similarity=0.037 Sum_probs=103.7
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
+.-|-+|-++.....+.+..+.|||+.+++.+...... .....+.+.|. + .+ +.......+.+++..++.-.
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspd---g-~~--l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR--GEVKDLHFSTD---G-KV--VAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS--SCCCEEEECTT---S-SE--EEEECSSCEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC--CceEEEEEccC---C-ce--EEeccceeEEEEEeccCcce
Confidence 34466675443221124678999999998766543321 12245566554 2 22 22222456777777776543
Q ss_pred eeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe---CCCCCCCCCCCceEEEEe-
Q 016751 195 NIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV---MMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i---~lP~~~~~~~~~~~l~~~- 270 (383)
............ ..- ...-+|.....+... +.....+..+|......... .+. .... .-..++..
T Consensus 211 ~~~~~~~~~~~v-~~v---~fspdg~~l~~~s~d----~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~--~V~~~~~Sp 279 (365)
T 4h5i_A 211 ARKTDFDKNWSL-SKI---NFIADDTVLIAASLK----KGKGIVLTKISIKSGNTSVLRSKQVT-NRFK--GITSMDVDM 279 (365)
T ss_dssp EEECCCCTTEEE-EEE---EEEETTEEEEEEEES----SSCCEEEEEEEEETTEEEEEEEEEEE-SSCS--CEEEEEECT
T ss_pred eeeecCCCCCCE-EEE---EEcCCCCEEEEEecC----CcceeEEeecccccceecceeeeeec-CCCC--CeEeEEECC
Confidence 322011111111 100 234466665555433 22233566777766655433 222 1110 11234433
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-CCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+|++.+.+..+ ..+.||-++. ...+..+.. .......+++..+|+.++. ...++ ++-++|+.++
T Consensus 280 dg~~lasgs~D----~~V~iwd~~~------~~~~~~~~~gH~~~V~~v~fSpdg~~laS--~S~D~-tvrvw~ip~~ 344 (365)
T 4h5i_A 280 KGELAVLASND----NSIALVKLKD------LSMSKIFKQAHSFAITEVTISPDSTYVAS--VSAAN-TIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEETT----SCEEEEETTT------TEEEEEETTSSSSCEEEEEECTTSCEEEE--EETTS-EEEEEECCTT
T ss_pred CCCceEEEcCC----CEEEEEECCC------CcEEEEecCcccCCEEEEEECCCCCEEEE--EeCCC-eEEEEEcCCC
Confidence 46766666555 4899998764 234445432 1114666788888988777 43455 4999998654
No 149
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=71.53 E-value=49 Score=28.50 Aligned_cols=209 Identities=10% Similarity=0.017 Sum_probs=98.6
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNI 196 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~ 196 (383)
..++.|++.+. ....++.++| +++...+..+.. ...++.+|+. +. ++.... ...+.+|+.. ++.+.+
T Consensus 54 ~~g~~l~~~d~--~~~~i~~~~~-~g~~~~~~~~~~--~~~gl~~d~d---G~---l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 54 EAQRTLVWSDL--VGRRVLGWRE-DGTVDVLLDATA--FTNGNAVDAQ---QR---LVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GGGTEEEEEET--TTTEEEEEET-TSCEEEEEESCS--CEEEEEECTT---SC---EEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCCCEEEEEEC--CCCEEEEEeC-CCCEEEEeCCCC--ccceeeECCC---CC---EEEEECCCCEEEEECCC-CCEEEE
Confidence 33333555543 5678888888 555444432221 1256666664 32 332222 3578888875 666555
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccC---------CCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCY---------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYL 267 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~---------~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l 267 (383)
. ............ ...+.-+|.+|+....... ........|..+|+.+.++..+. . ... ...+
T Consensus 122 ~-~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~~----p~gl 193 (305)
T 3dr2_A 122 V-GRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LDH----PNGL 193 (305)
T ss_dssp E-CEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ESS----EEEE
T ss_pred E-eccCCCccCCCC-CEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CCC----Ccce
Confidence 4 111111110111 0023347888774210000 00012357999999877776553 2 111 1223
Q ss_pred EEe-CCe-EEEEEecCC-CCccEEEEEEeccCCCCCCeEEEEEe-cCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 268 NVF-DGY-LCVFATIPN-NTFRSYELWVMKEYGLTESWTKLYTI-EKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 268 ~~~-~g~-L~~v~~~~~-~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
+.. +|+ |+++..... .....+.++.++.. . ......+ ........-+.+..+|+|++. . ... +.+||
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~---~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~--~--~~g-v~~~~ 264 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG---A-LHDRRHFASVPDGLPDGFCVDRGGWLWSS--S--GTG-VCVFD 264 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETT---E-EEEEEEEECCSSSCCCSEEECTTSCEEEC--C--SSE-EEEEC
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCC---C-ccCCeEEEECCCCCCCeEEECCCCCEEEe--c--CCc-EEEEC
Confidence 333 344 676654320 00124444444431 1 2211111 111101222456678888876 4 333 99999
Q ss_pred CCCCeEEEEEEe
Q 016751 344 PHSDTFKCIGVH 355 (383)
Q Consensus 344 ~~t~~~~~v~~~ 355 (383)
++.+.+..+...
T Consensus 265 ~~g~~~~~~~~~ 276 (305)
T 3dr2_A 265 SDGQLLGHIPTP 276 (305)
T ss_dssp TTSCEEEEEECS
T ss_pred CCCCEEEEEECC
Confidence 988877777654
No 150
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.09 E-value=48 Score=28.21 Aligned_cols=189 Identities=6% Similarity=-0.067 Sum_probs=93.1
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCC---CceeEEEeccCCCCCCeEEEEE--Ee----------
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNP---RYLGFGVNSVSGHLDDFKVVTI--SV---------- 179 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~---~~~~~g~d~~~~~~~~ykVv~~--~~---------- 179 (383)
+..+.+|.+++... ....++++||.+++...+....... ....+.+|+. + .+-+... ..
T Consensus 74 l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~---G-~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 74 HCLNKQGHLIACSH--GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD---G-SLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp EEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT---S-CEEEEECSHHHHCGGGSSCCC
T ss_pred eeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC---C-CEEEECCcccccccccccccc
Confidence 44456777766652 4578999999888877664321111 1134566654 3 2212100 00
Q ss_pred ----cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECC-CCee-e-
Q 016751 180 ----NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFA-KEIF-Q- 250 (383)
Q Consensus 180 ----~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~-~~~~-~- 250 (383)
...+..|+.. ++-+.+......+ . ++. -+|.+++..... ..|..||+. +.++ .
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~~~~~------~---gi~~s~dg~~lv~~~~~--------~~i~~~~~~~~g~~~~~ 209 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRDRVKP------N---GLAFLPSGNLLVSDTGD--------NATHRYCLNARGETEYQ 209 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECCCSSE------E---EEEECTTSCEEEEETTT--------TEEEEEEECSSSCEEEE
T ss_pred ccCCCcEEEEECCC-CCEEEeecCCCCC------c---cEEECCCCCEEEEeCCC--------CeEEEEEECCCCcCcCC
Confidence 1244555544 4443332111111 1 333 367776443332 589999986 4444 1
Q ss_pred --EeCCCCCCCCCCCceEEEE-eCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCC-c
Q 016751 251 --TVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERG-K 325 (383)
Q Consensus 251 --~i~lP~~~~~~~~~~~l~~-~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g-~ 325 (383)
.+... ... ...++. .+|+|++.. . ..+.+|..+ .+-......+.. ...+++. .++ .
T Consensus 210 ~~~~~~~-~~~----p~~i~~d~~G~l~v~~--~----~~v~~~~~~-----g~~~~~~~~~~~---~~~~~f~~~d~~~ 270 (296)
T 3e5z_A 210 GVHFTVE-PGK----TDGLRVDAGGLIWASA--G----DGVHVLTPD-----GDELGRVLTPQT---TSNLCFGGPEGRT 270 (296)
T ss_dssp EEEECCS-SSC----CCSEEEBTTSCEEEEE--T----TEEEEECTT-----SCEEEEEECSSC---CCEEEEESTTSCE
T ss_pred CeEeeCC-CCC----CCeEEECCCCCEEEEc--C----CeEEEECCC-----CCEEEEEECCCC---ceeEEEECCCCCE
Confidence 12111 111 112444 358888777 3 366665443 222332333322 2223443 455 4
Q ss_pred EEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 326 IFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 326 i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
|++. . . .. ++.++++++++++
T Consensus 271 L~v~--t-~-~~-l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 271 LYMT--V-S-TE-FWSIETNVRGLEH 291 (296)
T ss_dssp EEEE--E-T-TE-EEEEECSCCBCCC
T ss_pred EEEE--c-C-Ce-EEEEEcccccccc
Confidence 6665 4 3 33 9999999998764
No 151
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=70.92 E-value=52 Score=29.83 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=51.6
Q ss_pred eEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEE
Q 016751 250 QTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFI 328 (383)
Q Consensus 250 ~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~ 328 (383)
..+..| ....+ ++..+... .+.+..++. + ..+.||-.+. ++-.+...+......+..+++..+|..++
T Consensus 95 ~~l~ap-~~~~d-~y~~~l~wS~~n~lAvgl-d----~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 95 RILDAP-EIRND-YYLNLVDWSSGNVLAVAL-D----NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp EEEECT-TCCCC-TTCBCEEECTTSEEEEEE-T----TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred eEEECC-CCccc-ccceeEEECCCCEEEEEe-C----CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEE
Confidence 344666 55544 33334433 355544544 3 4899998764 33444444433222366677778888777
Q ss_pred EEEeeCCceEEEEEeCCCCeEEE
Q 016751 329 RGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 329 ~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
. ...++ .+.++|.++++...
T Consensus 164 s--gs~Dg-~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 164 V--GTSSA-EVQLWDVQQQKRLR 183 (420)
T ss_dssp E--EETTS-CEEEEETTTTEEEE
T ss_pred E--EECCC-eEEEEEcCCCcEEE
Confidence 7 43455 49999999987543
No 152
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=70.91 E-value=54 Score=28.69 Aligned_cols=180 Identities=10% Similarity=0.017 Sum_probs=87.6
Q ss_pred CceEEEEccCccceeec-CCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCC---ce-eeeccCCCceee
Q 016751 132 RSLIYLWNPLIKKYMTL-PRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSN---SW-KNIAYGFPRSIE 205 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~L-P~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~---~W-~~~~~~~p~~~~ 205 (383)
...+.+.++.+++...+ |... ...++.+|+. .+ +++.... ...+..++..+. +- +.+- .. ..
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~---~p~g~~~d~~---~~--~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~~--~~- 76 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLR---NVVALDTEVA---SN--RIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SR--DI- 76 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCS---SEEEEEEETT---TT--EEEEEETTTTEEEEEEC--------CEEEE-CS--SC-
T ss_pred CCeEEEEECCCcceEehhcCCC---ceEEEEEEeC---CC--EEEEEECCCCcEEEEECCCCCCCcccEEEE-eC--CC-
Confidence 34567777777655443 3221 2267777765 33 3333332 457777777651 22 2211 10 00
Q ss_pred eccCcccceeE---ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEec
Q 016751 206 INRSHINSSVF---LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATI 280 (383)
Q Consensus 206 ~~~~~~~~~v~---~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~ 280 (383)
.... ++. .+|.+||..... ..|..+|+....-..+--. ... ....+++. +|.|++....
T Consensus 77 -~~p~---glavd~~~~~ly~~d~~~--------~~I~~~~~~g~~~~~~~~~-~~~---~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 77 -QAPD---GLAVDWIHSNIYWTDSVL--------GTVSVADTKGVKRKTLFRE-NGS---KPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp -SCCC---EEEEETTTTEEEEEETTT--------TEEEEEETTSSSEEEEEEC-TTC---CEEEEEEETTTTEEEEEECS
T ss_pred -CCcC---EEEEeecCCeEEEEECCC--------CEEEEEeCCCCceEEEEEC-CCC---CcceEEeCCCCCEEEEEccC
Confidence 0111 444 368999986554 5899999986544433111 111 12345553 6788887643
Q ss_pred CCCCccEEEEEEeccCCCCCCeEEE-EEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 281 PNNTFRSYELWVMKEYGLTESWTKL-YTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 281 ~~~~~~~l~iW~l~~~~~~~~W~~~-~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
. .-.|++.+-.+. -.++ ..-.+. ...-+++. .++.||+. ..... .+..+|++....+.+
T Consensus 141 ~-----~~~I~~~~~dG~---~~~~~~~~~~~--~P~gla~d~~~~~lY~~--D~~~~-~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 141 T-----PAKIKKGGLNGV---DIYSLVTENIQ--WPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTI 201 (316)
T ss_dssp S-----SCEEEEEETTSC---CEEEEECSSCS--CEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred C-----CCeEEEEcCCCC---CeEEEEECCCC--CceEEEEeccCCEEEEE--ECCCC-eEEEEecCCCceEEE
Confidence 2 124555554321 1221 111111 12234444 35578877 42233 588888876555444
No 153
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=69.55 E-value=67 Score=29.30 Aligned_cols=198 Identities=12% Similarity=0.100 Sum_probs=98.5
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
+.+|+++... .++.+.+||..+++....-.... .....+.+.+. .+.-.++.......+.+|+..++.-....
T Consensus 171 ~~~~~l~s~s---~dg~i~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~---~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 171 AHGGILVSGS---TDRTVRVWDIKKGCCTHVFEGHN-STVRCLDIVEY---KNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp CSTTEEEEEE---TTSCEEEEETTTTEEEEEECCCS-SCEEEEEEEES---SSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred cCCCEEEEEe---CCCCEEEEECCCCcEEEEECCCC-CccEEEEEecC---CCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 4566555444 67889999998877554322111 11244555543 33344444444678889998775422110
Q ss_pred c-C--C----------C--ceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCC
Q 016751 198 Y-G--F----------P--RSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTD 261 (383)
Q Consensus 198 ~-~--~----------p--~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~ 261 (383)
. . . + .............+..+|.....+..+ ..|..+|+.+.+-... ... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~-~~--- 311 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD--------NTLIVWDVAQMKCLYILSGH-TD--- 311 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT--------SCEEEEETTTTEEEEEECCC-SS---
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC--------CeEEEEECCCCcEEEEecCC-CC---
Confidence 0 0 0 0 000000000001334455544444433 5799999987654332 221 11
Q ss_pred CCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEE
Q 016751 262 DADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLL 340 (383)
Q Consensus 262 ~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 340 (383)
....+.-. +|...+.+..+ ..+.+|.++. ...+..+.........+.+ ++..++. ...++ .+.
T Consensus 312 -~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~------~~~~~~~~~h~~~v~~~~~--~~~~l~s--~s~dg-~v~ 375 (464)
T 3v7d_B 312 -RIYSTIYDHERKRCISASMD----TTIRIWDLEN------GELMYTLQGHTALVGLLRL--SDKFLVS--AAADG-SIR 375 (464)
T ss_dssp -CEEEEEEETTTTEEEEEETT----SCEEEEETTT------TEEEEEECCCSSCEEEEEE--CSSEEEE--EETTS-EEE
T ss_pred -CEEEEEEcCCCCEEEEEeCC----CcEEEEECCC------CcEEEEEeCCCCcEEEEEE--cCCEEEE--EeCCC-cEE
Confidence 12233333 45665555555 4899998864 1344444332212333333 3455555 32555 499
Q ss_pred EEeCCCCeEE
Q 016751 341 VYNPHSDTFK 350 (383)
Q Consensus 341 ~yd~~t~~~~ 350 (383)
+||+++.+..
T Consensus 376 vwd~~~~~~~ 385 (464)
T 3v7d_B 376 GWDANDYSRK 385 (464)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcee
Confidence 9999987643
No 154
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.04 E-value=54 Score=27.97 Aligned_cols=200 Identities=8% Similarity=0.027 Sum_probs=92.1
Q ss_pred ccCceEEEeecCCCCceEEEEccCccce--eecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC---
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKY--MTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN--- 191 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~--~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~--- 191 (383)
+.+|-+++... .++.+.|||..+++. ..+....... ....+.+.+. .+.-.++.......+.+|+.+++
T Consensus 20 ~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~d~~~l~s~~~dg~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 20 DFYGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP---EYGRIIASASYDKTVKLWEEDPDQEE 94 (351)
T ss_dssp CSSSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG---GGCSEEEEEETTSCEEEEEECTTSCT
T ss_pred cCCCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC---CCCCEEEEEcCCCeEEEEecCCCccc
Confidence 44554444332 566788888765421 1111111111 1255566553 22333444443667899998764
Q ss_pred ----ceeeeccCCCceeeeccCcccceeEEC----ceEEEEEeeccCCCCCCCcEEEEEECCCCee----eE------eC
Q 016751 192 ----SWKNIAYGFPRSIEINRSHINSSVFLN----GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF----QT------VM 253 (383)
Q Consensus 192 ----~W~~~~~~~p~~~~~~~~~~~~~v~~~----G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~----~~------i~ 253 (383)
.|+.+. .......... ++.+. |.+...+..+ ..|..+|+.+..- .. +.
T Consensus 95 ~~~~~~~~~~-~~~~~~~~v~-----~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 95 CSGRRWNKLC-TLNDSKGSLY-----SVKFAPAHLGLKLACLGND--------GILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp TSSCSEEEEE-EECCCSSCEE-----EEEECCGGGCSEEEEEETT--------CEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred ccccCcceee-eecccCCcee-----EEEEcCCCCCcEEEEecCC--------CcEEEecCCChHHhccccccccccccc
Confidence 344333 1110000000 22222 4444444433 5889999876531 11 11
Q ss_pred CCCCCCCCCCceEEEEe----CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC----c
Q 016751 254 MPYDLSTDDADKYLNVF----DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG----K 325 (383)
Q Consensus 254 lP~~~~~~~~~~~l~~~----~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g----~ 325 (383)
.+ ..........+.-. ++.+.++...++ .+.+|.... .....+..+.........+.+..++ .
T Consensus 161 ~~-~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~----~~~~~~~~~----~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 161 IP-PANHLQSDFCLSWCPSRFSPEKLAVSALEQ----AIIYQRGKD----GKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp CC-CSSCSCCCEEEEECCCSSSCCEEEEEETTE----EEEEEECTT----SCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred cc-cCCcccceeEEEeccCCCCCcEEEEecCCC----cEEEEccCC----CceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 11 10111111222222 255656555543 554444433 3454455554322135556666665 5
Q ss_pred EEEEEEeeCCceEEEEEeCCCCe
Q 016751 326 IFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 326 i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+++. ...++ .+..||++++.
T Consensus 232 ~l~s--~~~dg-~i~iwd~~~~~ 251 (351)
T 3f3f_A 232 LIAT--GCKDG-RIRIFKITEKL 251 (351)
T ss_dssp EEEE--EETTS-CEEEEEEEECC
T ss_pred EEEE--EcCCC-eEEEEeCCCCc
Confidence 6666 43455 48999988753
No 155
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=68.96 E-value=69 Score=29.17 Aligned_cols=186 Identities=11% Similarity=0.074 Sum_probs=93.0
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe---cCeEEEEEcCCCceeeeccCCCceeeeccC
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV---NADAEVYSLRSNSWKNIAYGFPRSIEINRS 209 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~---~~~~~vyss~t~~W~~~~~~~p~~~~~~~~ 209 (383)
..++++|...++...+..... ....+.+.|. + . +++.... ...+.+++..+++.+.+. ..+......
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~--~v~~~~~Spd---g-~-~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~~~~~~~-- 228 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ--PLMSPAWSPD---G-S-KLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAP-- 228 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS--CEEEEEECTT---S-S-EEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEE--
T ss_pred ceEEEEcCCCCCCEEEeCCCC--cceeeEEcCC---C-C-EEEEEEecCCCcEEEEEECCCCcEEEee-cCCCcccCE--
Confidence 689999987765555532211 1234455553 2 2 3333332 258999999998877655 332211100
Q ss_pred cccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccE
Q 016751 210 HINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRS 287 (383)
Q Consensus 210 ~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~ 287 (383)
...-+|. +++..... ....|..+|+.+.....+.-. .. ....+.-. +|+..++..... ..
T Consensus 229 ----~~spdg~~la~~~~~~------g~~~i~~~d~~~~~~~~l~~~-~~----~~~~~~~spdg~~l~~~s~~~---g~ 290 (415)
T 2hqs_A 229 ----AFSPDGSKLAFALSKT------GSLNLYVMDLASGQIRQVTDG-RS----NNTEPTWFPDSQNLAFTSDQA---GR 290 (415)
T ss_dssp ----EECTTSSEEEEEECTT------SSCEEEEEETTTCCEEECCCC-SS----CEEEEEECTTSSEEEEEECTT---SS
T ss_pred ----EEcCCCCEEEEEEecC------CCceEEEEECCCCCEEeCcCC-CC----cccceEECCCCCEEEEEECCC---CC
Confidence 1222565 44444322 235799999988776544221 11 11223322 455433333322 34
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCC-ceEEEEEeCCCCeEEEE
Q 016751 288 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHG-GYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~-~~~~~~yd~~t~~~~~v 352 (383)
..||.++-.. .+ ...+.........+.+..+|+.++.. ...+ ...++.+|+++++.+.+
T Consensus 291 ~~i~~~d~~~--~~---~~~l~~~~~~~~~~~~spdG~~l~~~-~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 291 PQVYKVNING--GA---PQRITWEGSQNQDADVSSDGKFMVMV-SSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp CEEEEEETTS--SC---CEECCCSSSEEEEEEECTTSSEEEEE-EECSSCEEEEEEETTTCCEEEC
T ss_pred cEEEEEECCC--CC---EEEEecCCCcccCeEECCCCCEEEEE-ECcCCceEEEEEECCCCCEEEe
Confidence 5666665422 11 11222211123345556677544441 2121 22599999999887654
No 156
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=68.83 E-value=59 Score=28.38 Aligned_cols=205 Identities=9% Similarity=0.029 Sum_probs=99.6
Q ss_pred eEEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 114 DVVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 114 ~~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
.+.++.+|.+.+-. ....+.++|..+++...--..........+.+.|. ...-.++.......+.+|+.+++.-
T Consensus 88 ~~s~s~D~~i~~w~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 88 IISRGPCNRLLLLY---PGNQITILDSKTNKVLREIEVDSANEIIYMYGHNE---VNTEYFIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp EEEECSTTEEEEEE---TTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC------CCEEEEEETTCCEEEEESSSSCE
T ss_pred eEEecCCCeEEEEE---ccCceEEeecCCcceeEEeecCCCCCEEEEEcCCC---CCCCEEEEEeCCCcEEEEECCCCcE
Confidence 45667778877766 46677888888877332211111112245566652 1222333333366889999988755
Q ss_pred eeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCC-CCCCCCceEEEEeC-
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYD-LSTDDADKYLNVFD- 271 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~-~~~~~~~~~l~~~~- 271 (383)
.... ....... ..+- ...-+|.+...+..+ ..|..||+.+..-....+. . +. .....+.-..
T Consensus 162 ~~~~-~~~~~~~-i~~~---~~~pdg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~-~~h~--~~v~~l~fs~~ 225 (343)
T 3lrv_A 162 YIVH-SAKSDVE-YSSG---VLHKDSLLLALYSPD--------GILDVYNLSSPDQASSRFP-VDEE--AKIKEVKFADN 225 (343)
T ss_dssp EEEE-CCCSSCC-CCEE---EECTTSCEEEEECTT--------SCEEEEESSCTTSCCEECC-CCTT--SCEEEEEECTT
T ss_pred EEEE-ecCCCCc-eEEE---EECCCCCEEEEEcCC--------CEEEEEECCCCCCCccEEe-ccCC--CCEEEEEEeCC
Confidence 3222 1111100 0100 223356665554443 5899999987754312222 1 11 1222334333
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEE--EEEecCCCceeEEEEEeeCCcEEEEEEeeC-CceEEEEEeC--CC
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTK--LYTIEKPQRIWWPLGFTERGKIFIRGECRH-GGYGLLVYNP--HS 346 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~--~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~yd~--~t 346 (383)
|...+... + ..+.+|-+........... .+..+.. ...+++..+|..++. ... ++ .+.+||. .+
T Consensus 226 g~~l~s~~-~----~~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~--~s~~d~-~i~v~~~~~~~ 294 (343)
T 3lrv_A 226 GYWMVVEC-D----QTVVCFDLRKDVGTLAYPTYTIPEFKTG---TVTYDIDDSGKNMIA--YSNESN-SLTIYKFDKKT 294 (343)
T ss_dssp SSEEEEEE-S----SBEEEEETTSSTTCBSSCCCBC-----C---CEEEEECTTSSEEEE--EETTTT-EEEEEEECTTT
T ss_pred CCEEEEEe-C----CeEEEEEcCCCCcceeeccccccccccc---ceEEEECCCCCEEEE--ecCCCC-cEEEEEEcccc
Confidence 44444444 3 3899999875321111110 0111111 123566677776666 323 44 3666666 45
Q ss_pred CeEEE
Q 016751 347 DTFKC 351 (383)
Q Consensus 347 ~~~~~ 351 (383)
+.|+.
T Consensus 295 ~~~~~ 299 (343)
T 3lrv_A 295 KNWTK 299 (343)
T ss_dssp CSEEE
T ss_pred cceEe
Confidence 56765
No 157
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=68.77 E-value=64 Score=28.72 Aligned_cols=185 Identities=12% Similarity=0.127 Sum_probs=87.5
Q ss_pred CCceEEEEccCcccee-ecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC--ceeeeccCCCceeeec
Q 016751 131 DRSLIYLWNPLIKKYM-TLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN--SWKNIAYGFPRSIEIN 207 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~-~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~--~W~~~~~~~p~~~~~~ 207 (383)
.++.+.|||..+++.. .+...........+.+.+. . .+ ++.......+.+|+..+. ..+... .......
T Consensus 43 ~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~-~~-l~~~~~dg~v~vw~~~~~~~~~~~~~-~~~~h~~-- 114 (416)
T 2pm9_A 43 TDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHN---N-KI-IAGALDNGSLELYSTNEANNAINSMA-RFSNHSS-- 114 (416)
T ss_dssp CCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSS---S-SC-EEEEESSSCEEEECCSSTTSCCCEEE-ECCCSSS--
T ss_pred CCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCC---C-Ce-EEEEccCCeEEEeecccccccccchh-hccCCcc--
Confidence 5668899998887643 2222222222355666554 2 22 233233568899998772 222222 1110000
Q ss_pred cCcccceeEEC---ceEEEEEeeccCCCCCCCcEEEEEECCCCee-----eEeCCCCCC-CCCCCceEEEEeC--CeEEE
Q 016751 208 RSHINSSVFLN---GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-----QTVMMPYDL-STDDADKYLNVFD--GYLCV 276 (383)
Q Consensus 208 ~~~~~~~v~~~---G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-----~~i~lP~~~-~~~~~~~~l~~~~--g~L~~ 276 (383)
.-. ++.+. |.+...+... ..|..+|+.+..- ....+. .. ........+.-.. +.+.+
T Consensus 115 ~v~---~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~ 182 (416)
T 2pm9_A 115 SVK---TVKFNAKQDNVLASGGNN--------GEIFIWDMNKCTESPSNYTPLTPG-QSMSSVDEVISLAWNQSLAHVFA 182 (416)
T ss_dssp CCC---EEEECSSSTTBEEEECSS--------SCEEBCBTTTTSSCTTTCCCBCCC-CSCCSSCCCCEEEECSSCTTEEE
T ss_pred ceE---EEEEcCCCCCEEEEEcCC--------CeEEEEECCCCccccccccccccc-cccCCCCCeeEEEeCCCCCcEEE
Confidence 000 22221 4444444333 4788899987651 111110 00 0111122333332 45555
Q ss_pred EEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC------CceeEEEEEeeCC-cEEEEEEeeCCc--eEEEEEeCCCC
Q 016751 277 FATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP------QRIWWPLGFTERG-KIFIRGECRHGG--YGLLVYNPHSD 347 (383)
Q Consensus 277 v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~------~~~~~~~~~~~~g-~i~~~~~~~~~~--~~~~~yd~~t~ 347 (383)
....+ ..+.+|.++.. ..+..+... ......+.+..++ .+++. ...++ ..+..||+++.
T Consensus 183 ~~~~d----g~v~iwd~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 183 SAGSS----NFASIWDLKAK------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT--ATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EESSS----SCEEEEETTTT------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE--EECCSSSCCCCEEETTST
T ss_pred EEcCC----CCEEEEECCCC------CcceEEeccccccccCCceEEEEECCCCCCEEEE--EECCCCCceEEEEeCCCC
Confidence 55444 48999988751 233333332 1134555666665 45555 32333 03888998874
No 158
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=68.72 E-value=70 Score=29.14 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=17.5
Q ss_pred EEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 318 LGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 318 ~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
.++..+|.++.. . .++ .+.++|+++++.++
T Consensus 406 ~~fspdg~~las--g-~d~-~i~iW~~~~gk~rK 435 (435)
T 4e54_B 406 NEFNPMGDTLAS--A-MGY-HILIWSQQEARTRK 435 (435)
T ss_dssp EEECTTSSCEEE--E-CSS-EEEECCCC------
T ss_pred EEECCCCCEEEE--E-cCC-cEEEEECCcCeeeC
Confidence 356677887776 5 555 49999999887653
No 159
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=68.58 E-value=1e+02 Score=31.14 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=58.1
Q ss_pred eeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCccEE
Q 016751 214 SVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSY 288 (383)
Q Consensus 214 ~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~l 288 (383)
++.+ +|.|||..... ..|.++|+.......+... ... .-..|++. +|.||+...... -
T Consensus 475 GLAvD~~~~~LY~tD~~~--------~~I~v~~ldG~~~~~l~~~--~l~--~P~gIaVDp~~g~LYwtD~g~~-----~ 537 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVL--------GTVSVADTKGVKRKTLFRE--NGS--KPRAIVVDPVHGFMYWTDWGTP-----A 537 (791)
T ss_dssp EEEEETTTTEEEEEETTT--------TEEEEEETTSSSEEEEEEC--TTC--CEEEEEEETTTTEEEEEECSSS-----C
T ss_pred eeeeeecCCcEEEEecCC--------CeEEEEeCCCCeEEEEEeC--CCC--CcceEEEecCCCCEEEecCCCC-----C
Confidence 4544 46999987654 6899999986655444211 110 12345553 588888774331 2
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEEEEE--e-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 289 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGF--T-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 289 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~--~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
.|++..-.+.. .+ .+-... ...|.++ . .++.||+. ..... .|..+|+.....+.+
T Consensus 538 ~I~~~~~dG~~---~~--~lv~~~-l~~P~GLavD~~~~~LYwa--D~~~~-~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 538 KIKKGGLNGVD---IY--SLVTEN-IQWPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEEEETTSCC---EE--EEECSS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred eEEEEecCCCc---eE--EEEeCC-CCCceEEEEecCCCeEEEE--eCCCC-cEEEEecCCCceEEE
Confidence 45555543321 11 111111 1334443 3 34567776 41222 477777766554444
No 160
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=68.27 E-value=54 Score=27.68 Aligned_cols=189 Identities=10% Similarity=0.048 Sum_probs=91.1
Q ss_pred cCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC-ceeeec
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN-SWKNIA 197 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~-~W~~~~ 197 (383)
.+++|+... .++.+.|||..+++....-.... .....+.+.+. + . .++.......+.+|+..+. ..+...
T Consensus 28 ~~~~l~s~~---~dg~v~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~---~-~-~l~~~~~dg~i~~~~~~~~~~~~~~~ 98 (313)
T 3odt_A 28 DDSKVASVS---RDGTVRLWSKDDQWLGTVVYTGQ-GFLNSVCYDSE---K-E-LLLFGGKDTMINGVPLFATSGEDPLY 98 (313)
T ss_dssp ETTEEEEEE---TTSEEEEEEESSSEEEEEEEECS-SCEEEEEEETT---T-T-EEEEEETTSCEEEEETTCCTTSCC-C
T ss_pred CCCEEEEEE---cCCcEEEEECCCCEEEEEeecCC-ccEEEEEECCC---C-C-EEEEecCCCeEEEEEeeecCCCCccc
Confidence 344544444 57789999987766444322211 11245556654 2 2 2333333556777777553 222111
Q ss_pred cCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeCCeEEEE
Q 016751 198 YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVF 277 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v 277 (383)
...... ..-. ++..+|.....+... ..|..+|... ....+... .... ........++.+.++
T Consensus 99 -~~~~~~--~~i~---~~~~~~~~l~~~~~d--------~~i~~~d~~~-~~~~~~~~-~~~v--~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 99 -TLIGHQ--GNVC---SLSFQDGVVISGSWD--------KTAKVWKEGS-LVYNLQAH-NASV--WDAKVVSFSENKFLT 160 (313)
T ss_dssp -EECCCS--SCEE---EEEEETTEEEEEETT--------SEEEEEETTE-EEEEEECC-SSCE--EEEEEEETTTTEEEE
T ss_pred -chhhcc--cCEE---EEEecCCEEEEEeCC--------CCEEEEcCCc-EEEecccC-CCce--eEEEEccCCCCEEEE
Confidence 111000 0001 445566655555443 5888899322 22222221 1110 111222225666666
Q ss_pred EecCCCCccEEEEEEeccCCCCCCeEEEEEecC-CCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 278 ATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-PQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 278 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
...+ ..+.+|... .....+.. .......+.+..++.++.. . .++ .+..||+++++..
T Consensus 161 ~~~d----~~i~i~d~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~-~dg-~i~i~d~~~~~~~ 218 (313)
T 3odt_A 161 ASAD----KTIKLWQND--------KVIKTFSGIHNDVVRHLAVVDDGHFISC--S-NDG-LIKLVDMHTGDVL 218 (313)
T ss_dssp EETT----SCEEEEETT--------EEEEEECSSCSSCEEEEEEEETTEEEEE--E-TTS-EEEEEETTTCCEE
T ss_pred EECC----CCEEEEecC--------ceEEEEeccCcccEEEEEEcCCCeEEEc--c-CCC-eEEEEECCchhhh
Confidence 6555 489999622 12222222 1113555666677774444 3 555 4999999987643
No 161
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=68.19 E-value=69 Score=29.72 Aligned_cols=74 Identities=11% Similarity=0.102 Sum_probs=45.3
Q ss_pred CCeEEEEEecCCCC---ccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCC
Q 016751 271 DGYLCVFATIPNNT---FRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 271 ~g~L~~v~~~~~~~---~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t 346 (383)
+++||+.......+ ...-.||+++- ..+..+.+|+... ...-+.+..+|+ .++. .......+.++|+.|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~-~P~gia~spDg~~~lyv--~n~~s~~VsVID~~t 402 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH-EIDSINVSQDAEPLLYA--LSAGTQTLHIYDAAT 402 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECCSSSCEEEE--EETTTTEEEEEETTT
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC-CcCeEEEccCCCEEEEE--EcCCCCeEEEEECCC
Confidence 46888876532100 12467888885 3467777887643 233355667776 5555 323222599999999
Q ss_pred CeEEE
Q 016751 347 DTFKC 351 (383)
Q Consensus 347 ~~~~~ 351 (383)
.+...
T Consensus 403 ~kvv~ 407 (426)
T 3c75_H 403 GEELR 407 (426)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 88653
No 162
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=67.68 E-value=66 Score=28.45 Aligned_cols=202 Identities=8% Similarity=0.089 Sum_probs=97.3
Q ss_pred eEEEeecCCCCceEEEEccCccc------eeecCCCCCC---CCceeEEEe----ccCCCCCCeEEEEEEecCeEEEEEc
Q 016751 122 VLCFCSNGSDRSLIYLWNPLIKK------YMTLPRPSLN---PRYLGFGVN----SVSGHLDDFKVVTISVNADAEVYSL 188 (383)
Q Consensus 122 ll~~~~~~~~~~~~~v~NP~t~~------~~~LP~~~~~---~~~~~~g~d----~~~~~~~~ykVv~~~~~~~~~vyss 188 (383)
-+++... .++.+.+||..+++ ...+...+.. .....+.+. +. +.+.++.......+.+|+.
T Consensus 82 ~~l~s~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 82 CLVATTS--FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL----LSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp EEEEEEE--TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--------CEEEEEEETTSCEEEEEE
T ss_pred cEEEEEc--CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC----CceEEEEEeCCCcEEEEeC
Confidence 4444432 57889999988877 5555443211 122556666 43 3443444444667888888
Q ss_pred CC------Cc---eeeeccCCCc-----eeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeC
Q 016751 189 RS------NS---WKNIAYGFPR-----SIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVM 253 (383)
Q Consensus 189 ~t------~~---W~~~~~~~p~-----~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~ 253 (383)
.+ +. |.... .+.. ......-. .....-+| +...+.. ...|..||+.+.+.. .+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~-~~~~~~~~-~l~~~~~--------dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTL-ELQGTVESPMTPSQFAT-SVDISERG-LIATGFN--------NGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp ESSSSHHHHTTTCCCCEE-EEEEEECCSSSSCCCCC-EEEECTTS-EEEEECT--------TSEEEEEETTTTEEEEEEE
T ss_pred CccccccccceeeccCcc-eeeeeeccccCCCCCce-EEEECCCc-eEEEEeC--------CCcEEEEECCCCceeEEEe
Confidence 76 32 21110 0000 00000000 00122246 3333333 358999999876543 233
Q ss_pred CCCCCCC-CCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-------------CCceeEEE
Q 016751 254 MPYDLST-DDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-------------PQRIWWPL 318 (383)
Q Consensus 254 lP~~~~~-~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-------------~~~~~~~~ 318 (383)
.+..... ......+.-. +|.+.++...++ ....+.+|.+... ..+..+.. .......+
T Consensus 225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (397)
T 1sq9_A 225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFG------ERIGSLSVPTHSSQASLGEFAHSSWVMSL 297 (397)
T ss_dssp CCC---CCCCCEEEEEECSSTTEEEEEEEET-TEEEEEEEETTTC------CEEEEECBC--------CCBSBSSCEEEE
T ss_pred ccccccccCCccceEEECCCCCEEEEEecCC-CCceEEEEECCCC------cccceeccCcccccccccccccCCcEEEE
Confidence 2000100 0111223332 466555555440 0137889988752 22333332 11134456
Q ss_pred EEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 319 GFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 319 ~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
.+..+|..++. ...++ .+.+||+++++..
T Consensus 298 ~~~~~~~~l~~--~~~dg-~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 298 SFNDSGETLCS--AGWDG-KLRFWDVKTKERI 326 (397)
T ss_dssp EECSSSSEEEE--EETTS-EEEEEETTTTEEE
T ss_pred EECCCCCEEEE--EeCCC-eEEEEEcCCCcee
Confidence 66667777666 43455 4999999998654
No 163
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=67.46 E-value=61 Score=28.04 Aligned_cols=201 Identities=12% Similarity=0.098 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecC-CCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee-e
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLP-RPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN-I 196 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP-~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~-~ 196 (383)
+|-+++... .++.+.+||..+++....- ...... ....+.+.+. . . .++.......+.+|+.+++.-.. +
T Consensus 127 ~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~-~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 127 DPNLLLSVS--KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL---G-E-KIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp CTTEEEEEE--TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT---S-S-EEEEEETTSCEEEEESCSHHHHHHH
T ss_pred CCCEEEEEe--CCCeEEEEEeecCeEEEEecccccccCceeEEEECCC---C-C-EEEEecCCCCEEEEECCCCcccccc
Confidence 455444432 5778999999887655432 111111 2255666654 2 2 33333336689999988753210 0
Q ss_pred c---------cCC---------Cc-eee-eccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-------
Q 016751 197 A---------YGF---------PR-SIE-INRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF------- 249 (383)
Q Consensus 197 ~---------~~~---------p~-~~~-~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~------- 249 (383)
. ... +. ... .+... -.++.++|.+...+... ..|..+|+.+..-
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY-VDCVRWLGDLILSKSCE--------NAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-CCEEEEETTEEEEECSS--------SEEEEEEESSTTCCGGGCCT
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcce-EEEEEEcCCEEEEEecC--------CEEEEEeCCCcccccccccc
Confidence 0 000 00 000 01100 01344446544444333 5889999876432
Q ss_pred -----eEe-CCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC--CceeEEEEE
Q 016751 250 -----QTV-MMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP--QRIWWPLGF 320 (383)
Q Consensus 250 -----~~i-~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~~~~~ 320 (383)
..+ .++ .....-....+... +|++.+++..+ ..+.+|.++... ........+... ......+++
T Consensus 271 ~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~~~~~d----g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 271 SESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLALGNQV----GKLYVWDLEVED--PHKAKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp TCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEEEECTT----SCEEEEECCSSS--GGGCEEEEECCTTCCSCEEEEEE
T ss_pred CCcchheecccc-ccCCcEEEEEEcCCCCCcEEEEEecC----CcEEEEECCCCC--CccccceEEcccccCCceEEEEe
Confidence 111 111 00000011111211 15665555444 489999998632 112233444432 113555667
Q ss_pred eeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 321 TERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 321 ~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
..+|..++. ...++ .+..||+.|
T Consensus 344 s~~~~~l~s--~~~dg-~i~iwd~~~ 366 (366)
T 3k26_A 344 SRDSSILIA--VCDDA-SIWRWDRLR 366 (366)
T ss_dssp CTTSSEEEE--EETTS-EEEEEEC--
T ss_pred CCCCCeEEE--EeCCC-EEEEEEecC
Confidence 777877776 43555 499999864
No 164
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=67.29 E-value=34 Score=33.82 Aligned_cols=116 Identities=14% Similarity=0.187 Sum_probs=59.1
Q ss_pred eeEECceEEEEEeeccCCCCCCCcEEEEEECCC--CeeeEe-CCCCCC-----CCCCCceEEEEeCCeEEEEEecCCCCc
Q 016751 214 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAK--EIFQTV-MMPYDL-----STDDADKYLNVFDGYLCVFATIPNNTF 285 (383)
Q Consensus 214 ~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~--~~~~~i-~lP~~~-----~~~~~~~~l~~~~g~L~~v~~~~~~~~ 285 (383)
++..+|.+|...... .+.++|..+ +.|+.- ..+ .. +.+.....++..+|+|++... +
T Consensus 62 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d---- 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMSWS---------RVIAVDAASGKELWRYDPEVA-KVKARTSCCDAVNRGVALWGDKVYVGTL-D---- 126 (668)
T ss_dssp CEEETTEEEEEEGGG---------EEEEEETTTCCEEEEECCCCC-GGGGGGCTTCSCCCCCEEEBTEEEEECT-T----
T ss_pred CEEECCEEEEECCCC---------eEEEEECCCChhceEECCCCC-ccccccccccCCccceEEECCEEEEEcC-C----
Confidence 788999999987655 899999764 467652 222 11 000011223455677766532 2
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCc--eeEEEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEE
Q 016751 286 RSYELWVMKEYGLTESWTKLYTIEKPQR--IWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 286 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~g~i~~~~~~~~-----~~~~~~~yd~~t~~~~~ 351 (383)
..+. .++....+..|.....-+.... ...|+. .++.||+. ... ++ .++.||.+|++...
T Consensus 127 g~l~--alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 127 GRLI--ALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIG--NGGAEYGVRG-FVSAYDADTGKLAW 192 (668)
T ss_dssp SEEE--EEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEEE
T ss_pred CEEE--EEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEe--CCCCCcCCCC-EEEEEECCCCcEEE
Confidence 2333 3332212355665321110000 112222 35666665 311 23 59999999988543
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=66.30 E-value=74 Score=28.52 Aligned_cols=204 Identities=15% Similarity=0.146 Sum_probs=100.3
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKN 195 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~ 195 (383)
.-+.+|-+++... .++.+.|||..+++....-.... .....+.+.+. + . .++.......+.+|+.+++....
T Consensus 130 ~~s~dg~~l~s~~--~d~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~---~-~-~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 130 CFSPDGKFLATGA--EDRLIRIWDIENRKIVMILQGHE-QDIYSLDYFPS---G-D-KLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTT---S-S-EEEEEETTSEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEccCC-CCEEEEEEcCC---C-C-EEEEecCCCcEEEEECCCCeeEE
Confidence 3455666555543 67889999998877554322111 11255666654 2 2 33433336789999998876533
Q ss_pred eccCCCceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCCCC-CCC--CceEEEEe
Q 016751 196 IAYGFPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYDLS-TDD--ADKYLNVF 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~-~~~--~~~~l~~~ 270 (383)
.- ......... .+.- +|.+...+..+ ..|..||+.+.... .+..+ ... ..+ ....+.-.
T Consensus 202 ~~-~~~~~v~~~------~~~~~~~~~l~~~s~d--------~~v~iwd~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 202 TL-SIEDGVTTV------AVSPGDGKYIAAGSLD--------RAVRVWDSETGFLVERLDSE-NESGTGHKDSVYSVVFT 265 (393)
T ss_dssp EE-ECSSCEEEE------EECSTTCCEEEEEETT--------SCEEEEETTTCCEEEEEC-------CCCSSCEEEEEEC
T ss_pred EE-EcCCCcEEE------EEECCCCCEEEEEcCC--------CcEEEEECCCCcEEEeeccc-ccCCCCCCCCEEEEEEC
Confidence 22 111111100 1111 56555544433 47889999876542 23222 111 111 12233333
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCC------CeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEe
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTE------SWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYN 343 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~------~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd 343 (383)
+|++.+.+..+ ..+.+|.++...... .......+.........+++..++..++. ...++ .+..+|
T Consensus 266 ~~g~~l~s~s~d----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--gs~D~-~v~iwd 338 (393)
T 1erj_A 266 RDGQSVVSGSLD----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS--GSKDR-GVLFWD 338 (393)
T ss_dssp TTSSEEEEEETT----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEE--EETTS-EEEEEE
T ss_pred CCCCEEEEEeCC----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEE--EeCCC-eEEEEE
Confidence 35555555444 599999987532100 01111111111112444556666666666 43455 499999
Q ss_pred CCCCeEE
Q 016751 344 PHSDTFK 350 (383)
Q Consensus 344 ~~t~~~~ 350 (383)
.++++..
T Consensus 339 ~~~~~~~ 345 (393)
T 1erj_A 339 KKSGNPL 345 (393)
T ss_dssp TTTCCEE
T ss_pred CCCCeEE
Confidence 9988643
No 166
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=66.03 E-value=79 Score=28.79 Aligned_cols=191 Identities=11% Similarity=0.052 Sum_probs=94.2
Q ss_pred ccCceEEEeecCCCCceEEEEccCccc----eeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCc
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKK----YMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNS 192 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~----~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~ 192 (383)
..+|.|...+. ....++..++.... ...+-... .....++.+|.. .+ +++.... ...+++++.....
T Consensus 121 ~~~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~---~~--~lY~~d~~~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 121 VASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWI---HS--NIYWTDSVLGTVSVADTKGVK 192 (400)
T ss_dssp TTTTEEEEEET--TTTEEEEEEC------CCCEEEECSS-CSCEEEEEEETT---TT--EEEEEETTTTEEEEECTTTCS
T ss_pred eccCceEEEec--CCCeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEec---CC--ceEEEECCCCeEEEEeCCCCc
Confidence 34666666653 44566666665421 11111100 011257777765 33 2333332 4577777777655
Q ss_pred eeeecc-CCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEE
Q 016751 193 WKNIAY-GFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLN 268 (383)
Q Consensus 193 W~~~~~-~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~ 268 (383)
-+.+.. .+.. .. ++.+ +|.|||..... ...|..+|+....-..+.- .... ....|+
T Consensus 193 ~~~l~~~~~~~------P~---~iavdp~~g~ly~td~~~-------~~~I~~~~~dG~~~~~~~~--~~l~--~P~gla 252 (400)
T 3p5b_L 193 RKTLFRENGSK------PR---AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVT--ENIQ--WPNGIT 252 (400)
T ss_dssp EEEEEECSSCC------EE---EEEEETTTTEEEEEECSS-------SCCEEEEETTSCSCEEEEC--SSCS--CEEEEE
T ss_pred eEEEEeCCCCC------cc---eEEEecccCeEEEEeCCC-------CCEEEEEeCCCCccEEEEE--CCCC--ceEEEE
Confidence 443331 1111 11 4444 68999976432 2479999987544333311 1110 123355
Q ss_pred Ee--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCC
Q 016751 269 VF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 269 ~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~ 345 (383)
.. +++||++..... .|+..+-.+ ...... ...+. . ...|.+++ .++.||+. . .+...+..+|..
T Consensus 253 vd~~~~~lY~aD~~~~------~I~~~d~dG-~~~~~~-~~~~~-~-l~~P~gl~v~~~~lywt--d-~~~~~V~~~~~~ 319 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLH------SISSIDVNG-GNRKTI-LEDEK-R-LAHPFSLAVFEDKVFWT--D-IINEAIFSANRL 319 (400)
T ss_dssp EETTTTEEEEEETTTT------EEEEEETTS-CCCEEE-EECSS-T-TSSEEEEEEETTEEEEE--E-SSSCSEEEEESS
T ss_pred EEeCCCEEEEEECCCC------EEEEEeCCC-CccEEE-EeCCC-C-CCCCEEEEEeCCEEEEe--c-CCCCeEEEEEcC
Confidence 54 689999875443 466665433 222222 22111 1 23455544 45578887 4 333359999977
Q ss_pred CCeE
Q 016751 346 SDTF 349 (383)
Q Consensus 346 t~~~ 349 (383)
+++.
T Consensus 320 ~G~~ 323 (400)
T 3p5b_L 320 TGSD 323 (400)
T ss_dssp SCCC
T ss_pred CCCc
Confidence 7654
No 167
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=65.93 E-value=70 Score=28.12 Aligned_cols=191 Identities=11% Similarity=0.002 Sum_probs=94.9
Q ss_pred ccCceEEEeecCCCCceEEEEccCccce--eecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCcee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKY--MTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWK 194 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~--~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~ 194 (383)
..+|.|...+. ....+..+++..+.. ..+...- ....++.+|+. .+ +++.... ...+++++.....=+
T Consensus 44 ~~~~~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~---~g--~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 44 FSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWL---GE--KLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp GGGTEEEEEET--TTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETT---TT--EEEEEETTTTEEEEEETTSCSCE
T ss_pred eCCCEEEEEEC--CCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcC---CC--eEEEEECCCCEEEEEECCCCcEE
Confidence 34566666653 456677777765421 1111100 01146777765 33 2222222 457788887654323
Q ss_pred eec-cCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe
Q 016751 195 NIA-YGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 195 ~~~-~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~ 270 (383)
.+. .....+ . ++.+ +|.+||..... ...|..+|+....-..+- . .... ....|+..
T Consensus 115 ~l~~~~~~~P------~---giavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~-~~l~--~Pnglavd 174 (318)
T 3sov_A 115 VLFWQELDQP------R---AIALDPSSGFMYWTDWGE-------VPKIERAGMDGSSRFIII-N-SEIY--WPNGLTLD 174 (318)
T ss_dssp EEECSSCSSE------E---EEEEEGGGTEEEEEECSS-------SCEEEEEETTSCSCEEEE-C-SSCS--CEEEEEEE
T ss_pred EEEeCCCCCc------c---EEEEeCCCCEEEEEecCC-------CCEEEEEEcCCCCeEEEE-E-CCCC--CccEEEEe
Confidence 222 011111 1 4444 58999986431 258999998754333321 1 1110 12345554
Q ss_pred --CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 --DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 --~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+|+||++..... .|+..+-.+. .. ..+. . .. ...|.+++ .++.+|+. . .+...+..+|+.++
T Consensus 175 ~~~~~lY~aD~~~~------~I~~~d~dG~-~~-~~~~--~-~~-~~~P~glav~~~~lywt--d-~~~~~V~~~~~~~G 239 (318)
T 3sov_A 175 YEEQKLYWADAKLN------FIHKSNLDGT-NR-QAVV--K-GS-LPHPFALTLFEDILYWT--D-WSTHSILACNKYTG 239 (318)
T ss_dssp TTTTEEEEEETTTT------EEEEEETTSC-SC-EEEE--C-SC-CSCEEEEEEETTEEEEE--E-TTTTEEEEEETTTC
T ss_pred ccCCEEEEEECCCC------EEEEEcCCCC-ce-EEEe--c-CC-CCCceEEEEeCCEEEEE--e-cCCCeEEEEECCCC
Confidence 688999876443 4555543321 11 1111 1 11 23455543 35577777 4 33335999999877
Q ss_pred eE-EEE
Q 016751 348 TF-KCI 352 (383)
Q Consensus 348 ~~-~~v 352 (383)
+. +.+
T Consensus 240 ~~~~~i 245 (318)
T 3sov_A 240 EGLREI 245 (318)
T ss_dssp CSCEEE
T ss_pred CceEEE
Confidence 64 444
No 168
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=65.39 E-value=69 Score=27.86 Aligned_cols=196 Identities=8% Similarity=0.017 Sum_probs=88.5
Q ss_pred EccCceEEEeecCCCCceEEEEccCc-c-ceeecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLI-K-KYMTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t-~-~~~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
-+.+|-.+.... .++.+.+||... + +...+....... ....+.+.|. . . .++.......+.+++..++.|
T Consensus 115 ~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---~-~-~l~s~s~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 115 WSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS---E-A-LLASSSYDDTVRIWKDYDDDW 187 (330)
T ss_dssp ECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS---S-S-EEEEEETTSCEEEEEEETTEE
T ss_pred ECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC---C-C-EEEEEcCCCeEEEEECCCCCe
Confidence 345666555543 577888998732 2 111111111111 1245566654 2 2 333333366788898888777
Q ss_pred eeeccCCCceeeeccCcccceeEE--C--ceEEEEEeeccCCCCCCCcEEEEEECCCC------eeeEe-CCCCCCCCCC
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL--N--GSVHWCARFSCYHDNSCPWLIVSFDFAKE------IFQTV-MMPYDLSTDD 262 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~--~--G~lYw~~~~~~~~~~~~~~~il~fD~~~~------~~~~i-~lP~~~~~~~ 262 (383)
+.+. .+........ ++.+ + |.....+.. ...|..+|+.+. .|... .++ .....
T Consensus 188 ~~~~-~~~~h~~~v~-----~~~~~~~~~~~~l~s~s~--------D~~v~iw~~~~~~~~~~~~~~~~~~~~-~~h~~- 251 (330)
T 2hes_X 188 ECVA-VLNGHEGTVW-----SSDFDKTEGVFRLCSGSD--------DSTVRVWKYMGDDEDDQQEWVCEAILP-DVHKR- 251 (330)
T ss_dssp EEEE-EECCCSSCEE-----EEEECCSSSSCEEEEEET--------TSCEEEEEEEEECTTSCEEEEEEEECC-SCCSS-
T ss_pred eEEE-EccCCCCcEE-----EEEecCCCCeeEEEEEeC--------CCeEEEEEecCCCccccceeEEeeecc-ccccc-
Confidence 6554 2211000000 1111 1 222222222 135666666432 34333 333 21111
Q ss_pred CceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-CCc-eeEEEEEee--CCcEEEEEEeeCCceE
Q 016751 263 ADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-PQR-IWWPLGFTE--RGKIFIRGECRHGGYG 338 (383)
Q Consensus 263 ~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~-~~~~~~~~~--~g~i~~~~~~~~~~~~ 338 (383)
....+.-..+.+.+....+ ..+.||.... ..|........ ... ....+.+.. ++.+++. ...++ .
T Consensus 252 ~v~~v~~s~~~~l~s~~~d----g~v~iw~~~~----~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las--~s~Dg-~ 320 (330)
T 2hes_X 252 QVYNVAWGFNGLIASVGAD----GVLAVYEEVD----GEWKVFAKRALCHGVYEINVVKWLELNGKTILAT--GGDDG-I 320 (330)
T ss_dssp CEEEEEECTTSCEEEEETT----SCEEEEEEET----TEEEEEEEESCTTTTSCEEEEEEC-----CCEEE--EETTS-E
T ss_pred ceEEEEEcCCCEEEEEeCC----CEEEEEEcCC----CceEEEeccccccccceEEEEEEecCCCceEEEE--ecCCC-c
Confidence 1223333344444444444 5899999874 45766544422 111 234445544 4566655 43566 4
Q ss_pred EEEEeCCC
Q 016751 339 LLVYNPHS 346 (383)
Q Consensus 339 ~~~yd~~t 346 (383)
+..+|+++
T Consensus 321 v~~W~~~~ 328 (330)
T 2hes_X 321 VNFWSLEK 328 (330)
T ss_dssp EEEEEC--
T ss_pred EEEEEecc
Confidence 88898865
No 169
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=64.88 E-value=76 Score=28.21 Aligned_cols=193 Identities=11% Similarity=0.025 Sum_probs=100.9
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~ 195 (383)
...+|.|...+. ....++.+++..+....+..... ....++.+|+. .+ +++.... ...+++++.....-+.
T Consensus 81 d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~---~g--~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 81 HHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWV---HD--KLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETT---TT--EEEEEETTTTEEEEEETTSCSCEE
T ss_pred eccccEEEEEec--cCCceEEEecCCCCceEEEeCCC-CCccEEEEecC---CC--eEEEEcCCCCeEEEEcCCCCceEE
Confidence 446788877774 56688888888765444322111 11156777765 33 2333322 4578888876544333
Q ss_pred ecc-CCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 196 IAY-GFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 196 ~~~-~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
+.. .+..+ . ++.+ +|.+||..... ...|..+|+....-..+- . .... ....|+..
T Consensus 153 l~~~~l~~P------~---~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~-~-~~~~--~PnGla~d~ 212 (349)
T 3v64_C 153 LLWQSLEKP------R---AIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIA-D-THLF--WPNGLTIDY 212 (349)
T ss_dssp EECTTCSCE------E---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESC-C-SSCS--CEEEEEEET
T ss_pred EEeCCCCCc------c---eEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEE-E-CCCC--CcceEEEeC
Confidence 220 11111 1 3333 68999976532 358999998765443331 1 1110 12345554
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+|+||++..... .|+..+-.+. .. ..+..... ..|.++. .++.||+. . .+...+..+|..+++
T Consensus 213 ~~~~lY~aD~~~~------~I~~~~~dG~-~~-~~~~~~~~----~~P~giav~~~~ly~t--d-~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 213 AGRRMYWVDAKHH------VIERANLDGS-HR-KAVISQGL----PHPFAITVFEDSLYWT--D-WHTKSINSANKFTGK 277 (349)
T ss_dssp TTTEEEEEETTTT------EEEEEETTSC-SC-EEEECSSC----SSEEEEEEETTEEEEE--E-TTTTEEEEEETTTCC
T ss_pred CCCEEEEEECCCC------EEEEEeCCCC-ce-EEEEeCCC----CCceEEEEECCEEEEe--c-CCCCeEEEEEccCCC
Confidence 689999876443 4445543221 11 11111111 2343432 46688888 5 333359999966655
Q ss_pred E-EEE
Q 016751 349 F-KCI 352 (383)
Q Consensus 349 ~-~~v 352 (383)
. +.+
T Consensus 278 ~~~~i 282 (349)
T 3v64_C 278 NQEII 282 (349)
T ss_dssp SCEEE
T ss_pred ccEEe
Confidence 3 444
No 170
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.60 E-value=99 Score=29.40 Aligned_cols=187 Identities=13% Similarity=0.025 Sum_probs=97.3
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe---cCeEEEEEcCCCceeee
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV---NADAEVYSLRSNSWKNI 196 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~---~~~~~vyss~t~~W~~~ 196 (383)
+++++... ......++|..+++...+...+. ..+.++|. +.+-+..-.. ...+.+++..++.++.+
T Consensus 122 ~~~~~~s~---~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spD----G~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 122 EAVVFTGA---TEDRVALYALDGGGLRELARLPG----FGFVSDIR----GDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp SCEEEEEE---CSSCEEEEEEETTEEEEEEEESS----CEEEEEEE----TTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred CeEEEEec---CCCCceEEEccCCcEEEeecCCC----ceEEECCC----CCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 34555554 34556689999988777754332 33445553 2333322221 25688889889988877
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceE------E-EE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKY------L-NV 269 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~------l-~~ 269 (383)
. ......... ...-||...+..... ....|..+|+.+.....+.-. .... .... . ..
T Consensus 191 ~-~~~~~~~~~------~~SpDG~~l~~~~~~------~~~~i~~~d~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 191 D-SGEGSFSSA------SISPGMKVTAGLETA------REARLVTVDPRDGSVEDLELP-SKDF--SSYRPTAITWLGYL 254 (582)
T ss_dssp C-CSSCEEEEE------EECTTSCEEEEEECS------SCEEEEEECTTTCCEEECCCS-CSHH--HHHCCSEEEEEEEC
T ss_pred e-cCCCccccc------eECCCCCEEEEccCC------CeeEEEEEcCCCCcEEEccCC-CcCh--hhhhhccccceeEc
Confidence 6 333222110 233367655533222 234899999998877622211 1100 0001 0 12
Q ss_pred eCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCe
Q 016751 270 FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDT 348 (383)
Q Consensus 270 ~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~yd~~t~~ 348 (383)
-+|++++....+ ....+|.+ +. ..+ .+. . ....+.+. +|.+++.... ... ..++.+|.++ +
T Consensus 255 pdg~~~~~~~~~----g~~~l~~~---g~---~~~---~~~-~-~v~~~~~s-dg~~l~~~s~-~~~p~~l~~~d~~~-~ 316 (582)
T 3o4h_A 255 PDGRLAVVARRE----GRSAVFID---GE---RVE---APQ-G-NHGRVVLW-RGKLVTSHTS-LSTPPRIVSLPSGE-P 316 (582)
T ss_dssp TTSCEEEEEEET----TEEEEEET---TE---EEC---CCS-S-EEEEEEEE-TTEEEEEEEE-TTEEEEEEEETTCC-E
T ss_pred CCCcEEEEEEcC----CcEEEEEE---CC---eec---cCC-C-ceEEEEec-CCEEEEEEcC-CCCCCeEEEEcCCC-c
Confidence 246666666555 48999988 21 111 111 1 23445556 7776665222 222 2588888875 4
Q ss_pred EEE
Q 016751 349 FKC 351 (383)
Q Consensus 349 ~~~ 351 (383)
.+.
T Consensus 317 ~~~ 319 (582)
T 3o4h_A 317 LLE 319 (582)
T ss_dssp EEC
T ss_pred eEE
Confidence 433
No 171
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.50 E-value=73 Score=27.81 Aligned_cols=106 Identities=12% Similarity=0.111 Sum_probs=58.5
Q ss_pred CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEE-eCCeEEEEEecCCCCccEEEEEEeccC
Q 016751 218 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKEY 296 (383)
Q Consensus 218 ~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~g~L~~v~~~~~~~~~~l~iW~l~~~ 296 (383)
+|.+||..... ..|..+|+.++....+..| ... ..++. -+|++.+.. . .. |+.++..
T Consensus 60 ~~~l~~~d~~~--------~~i~~~d~~~~~~~~~~~~-~~v-----~~i~~~~dg~l~v~~--~----~g--l~~~d~~ 117 (326)
T 2ghs_A 60 SGTAWWFNILE--------RELHELHLASGRKTVHALP-FMG-----SALAKISDSKQLIAS--D----DG--LFLRDTA 117 (326)
T ss_dssp TTEEEEEEGGG--------TEEEEEETTTTEEEEEECS-SCE-----EEEEEEETTEEEEEE--T----TE--EEEEETT
T ss_pred CCEEEEEECCC--------CEEEEEECCCCcEEEEECC-Ccc-----eEEEEeCCCeEEEEE--C----CC--EEEEECC
Confidence 37899987655 5899999999887766655 322 23333 457776654 2 23 4444421
Q ss_pred CCCCCeEEEEEecCC--CceeEEEEEeeCCcEEEEEEeeC------CceEEEEEeCCCCeEEEE
Q 016751 297 GLTESWTKLYTIEKP--QRIWWPLGFTERGKIFIRGECRH------GGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 297 ~~~~~W~~~~~i~~~--~~~~~~~~~~~~g~i~~~~~~~~------~~~~~~~yd~~t~~~~~v 352 (383)
..+.......... ......+.+..+|.+++. ... .. .++.|| +++++.+
T Consensus 118 --~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~~~~~~~-~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 118 --TGVLTLHAELESDLPGNRSNDGRMHPSGALWIG--TMGRKAETGAG-SIYHVA--KGKVTKL 174 (326)
T ss_dssp --TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEE--EEETTCCTTCE-EEEEEE--TTEEEEE
T ss_pred --CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEE--eCCCcCCCCce-EEEEEe--CCcEEEe
Confidence 1334433322211 102334555667787776 311 12 488888 5666544
No 172
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=63.70 E-value=30 Score=34.34 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=59.0
Q ss_pred eeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe-CCCCCC-----CCCCCceEEEEeCCeEEEEEecCCCCc
Q 016751 214 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV-MMPYDL-----STDDADKYLNVFDGYLCVFATIPNNTF 285 (383)
Q Consensus 214 ~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i-~lP~~~-----~~~~~~~~l~~~~g~L~~v~~~~~~~~ 285 (383)
++..+|.+|.....+ .+.++|..+. .|+.- ..+ .. +.+.....++..+|+|++....
T Consensus 73 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----- 137 (677)
T 1kb0_A 73 PVVVDGIMYVSASWS---------VVHAIDTRTGNRIWTYDPQID-RSTGFKGCCDVVNRGVALWKGKVYVGAWD----- 137 (677)
T ss_dssp CEEETTEEEEECGGG---------CEEEEETTTTEEEEEECCCCC-GGGGGGSSSCSCCCCCEEETTEEEEECTT-----
T ss_pred CEEECCEEEEECCCC---------eEEEEECCCCcEEEEEcCCCC-ccccccccccCCCCCceEECCEEEEEcCC-----
Confidence 788999999877654 7999998654 56543 211 10 1011112344566777665322
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCC---CceeEEEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEEE
Q 016751 286 RSYELWVMKEYGLTESWTKLYTIEKP---QRIWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 286 ~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~~~~~~~~g~i~~~~~~~~-----~~~~~~~yd~~t~~~~~ 351 (383)
..+..+-.+. .+..|......... .....|+. .++.||+. ... ++ .++.||.+|++...
T Consensus 138 g~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~--~~~~~~~~~g-~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 138 GRLIALDAAT--GKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIG--NGGAEYGVRG-YITAYDAETGERKW 204 (677)
T ss_dssp SEEEEEETTT--CCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEEE
T ss_pred CEEEEEECCC--CCEEeeecCCcCcCcCcccccCcEE--ECCEEEEE--ecccccCCCC-EEEEEECCCCcEEE
Confidence 2333333222 23456653110000 00112222 35666665 311 23 59999999988553
No 173
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=63.47 E-value=73 Score=27.51 Aligned_cols=194 Identities=10% Similarity=0.158 Sum_probs=97.2
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
..+.+|-.++... .++.+.|||..+++... +..-. .....+.+.+. . -.++.......+.+|+.+...-.
T Consensus 72 ~~s~dg~~l~s~s--~D~~v~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~---~--~~l~s~s~D~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 72 TLTADGAYALSAS--WDKTLRLWDVATGETYQRFVGHK--SDVMSVDIDKK---A--SMIISGSRDKTIKVWTIKGQCLA 142 (319)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCS--SCEEEEEECTT---S--CEEEEEETTSCEEEEETTSCEEE
T ss_pred EECCCCCEEEEEe--CCCEEEEEECCCCCeeEEEccCC--CcEEEEEEcCC---C--CEEEEEeCCCeEEEEECCCCeEE
Confidence 4455666655553 67889999998877543 22111 11244555543 2 23333333567888888654333
Q ss_pred eeccCCCcee---eeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-
Q 016751 195 NIAYGFPRSI---EINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 195 ~~~~~~p~~~---~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~- 270 (383)
.+. ...... .+.... ...-++.....+... ..|..+|+.+.+....-.. +.. ....+...
T Consensus 143 ~~~-~h~~~v~~~~~~~~~---~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~~~~~~~--h~~--~v~~~~~sp 206 (319)
T 3frx_A 143 TLL-GHNDWVSQVRVVPNE---KADDDSVTIISAGND--------KMVKAWNLNQFQIEADFIG--HNS--NINTLTASP 206 (319)
T ss_dssp EEC-CCSSCEEEEEECCC---------CCEEEEEETT--------SCEEEEETTTTEEEEEECC--CCS--CEEEEEECT
T ss_pred EEe-ccCCcEEEEEEccCC---CCCCCccEEEEEeCC--------CEEEEEECCcchhheeecC--CCC--cEEEEEEcC
Confidence 222 111100 010000 111133333333332 5788899987654332111 110 12234444
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
+|++.+....+ ..+.+|.+... ..+..+.... ....+++..+|..+.. . .+.. +.+|+.+++..
T Consensus 207 ~g~~l~s~~~d----g~i~iwd~~~~------~~~~~~~~~~-~v~~~~~sp~~~~la~--~-~~~~-i~v~~~~~~~~ 270 (319)
T 3frx_A 207 DGTLIASAGKD----GEIMLWNLAAK------KAMYTLSAQD-EVFSLAFSPNRYWLAA--A-TATG-IKVFSLDPQYL 270 (319)
T ss_dssp TSSEEEEEETT----CEEEEEETTTT------EEEEEEECCS-CEEEEEECSSSSEEEE--E-ETTE-EEEEEETTEEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCC------cEEEEecCCC-cEEEEEEcCCCCEEEE--E-cCCC-cEEEEeCcCee
Confidence 36665555554 49999988751 2334444332 2555677777877766 4 3333 77777776553
No 174
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=63.45 E-value=1.5e+02 Score=31.21 Aligned_cols=194 Identities=10% Similarity=0.137 Sum_probs=98.5
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
+.-+.+|-++...+ .++.+.|||..+++... +.. .......+.+.|. +.+ ++.......+.||+..+++-
T Consensus 621 ~~~s~~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~----~~~-l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 621 ACFSQDGQRIASCG--ADKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSD----DSY-IATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTT----SSE-EEEEETTSEEEEEETTTCCE
T ss_pred EEECCCCCEEEEEe--CCCeEEEEECCCCCEEEEecc--CCCCEEEEEEecC----CCE-EEEEeCCCeEEEEECCCCce
Confidence 34455665555443 67789999999877543 331 1112255666654 233 33333366899999988754
Q ss_pred eeeccCCCceeeeccCcccceeEE----CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEE
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL----NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNV 269 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~----~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~ 269 (383)
...-........ ++.+ ++.+...+..+ ..|..+|+.+......-.. ... ....+..
T Consensus 692 ~~~~~~~~~~v~--------~~~~~~~~~~~~l~sg~~d--------~~v~vwd~~~~~~~~~~~~-h~~---~v~~~~~ 751 (1249)
T 3sfz_A 692 VHTYDEHSEQVN--------CCHFTNKSNHLLLATGSND--------FFLKLWDLNQKECRNTMFG-HTN---SVNHCRF 751 (1249)
T ss_dssp EEEEECCSSCEE--------EEEECSSSSCCEEEEEETT--------SCEEEEETTSSSEEEEECC-CSS---CEEEEEE
T ss_pred EEEEcCCCCcEE--------EEEEecCCCceEEEEEeCC--------CeEEEEECCCcchhheecC-CCC---CEEEEEE
Confidence 322101111111 1221 23333333322 4788999987764332111 111 1122333
Q ss_pred e-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-------------eeEEEEEeeCCcEEEEEEeeCC
Q 016751 270 F-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-------------IWWPLGFTERGKIFIRGECRHG 335 (383)
Q Consensus 270 ~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-------------~~~~~~~~~~g~i~~~~~~~~~ 335 (383)
. +|.+.+....+ ..+.+|.+.... ....+..... ....+.+..+|..++. . .+
T Consensus 752 sp~~~~l~s~s~d----g~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~--~-~~ 818 (1249)
T 3sfz_A 752 SPDDELLASCSAD----GTLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIV--A-AK 818 (1249)
T ss_dssp CSSTTEEEEEESS----SEEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEE--E-ET
T ss_pred ecCCCEEEEEECC----CeEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEECCCCCEEEE--E-cC
Confidence 3 45655555544 489999987521 1111211100 1223445567776666 4 34
Q ss_pred ceEEEEEeCCCCeEEE
Q 016751 336 GYGLLVYNPHSDTFKC 351 (383)
Q Consensus 336 ~~~~~~yd~~t~~~~~ 351 (383)
+ .+..||..++....
T Consensus 819 ~-~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 819 N-KVLLFDIHTSGLLA 833 (1249)
T ss_dssp T-EEEEEETTTCCEEE
T ss_pred C-cEEEEEecCCCcee
Confidence 4 38999999877544
No 175
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=63.03 E-value=74 Score=27.41 Aligned_cols=107 Identities=10% Similarity=-0.001 Sum_probs=59.0
Q ss_pred CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccC
Q 016751 218 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEY 296 (383)
Q Consensus 218 ~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~ 296 (383)
+|.+||..... ..|..||+..+.-..+..+ . .-..++.. +|+|+++..... ...|+.++..
T Consensus 42 ~g~lyv~d~~~--------~~I~~~d~~g~~~~~~~~~-~-----~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~ 103 (306)
T 2p4o_A 42 DGTIFVTNHEV--------GEIVSITPDGNQQIHATVE-G-----KVSGLAFTSNGDLVATGWNAD----SIPVVSLVKS 103 (306)
T ss_dssp TSCEEEEETTT--------TEEEEECTTCCEEEEEECS-S-----EEEEEEECTTSCEEEEEECTT----SCEEEEEECT
T ss_pred CCCEEEEeCCC--------CeEEEECCCCceEEEEeCC-C-----CceeEEEcCCCcEEEEeccCC----cceEEEEcCC
Confidence 78999987543 5899999987644444444 2 11234444 578887765432 3345555422
Q ss_pred CCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 297 GLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 297 ~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
..+......++... ...-.+...++.+|+. ....+ .++.+|+.+++
T Consensus 104 --~g~~~~~~~~~~~~-~~~g~~~~~~~~~~v~--d~~~g-~i~~~d~~~~~ 149 (306)
T 2p4o_A 104 --DGTVETLLTLPDAI-FLNGITPLSDTQYLTA--DSYRG-AIWLIDVVQPS 149 (306)
T ss_dssp --TSCEEEEEECTTCS-CEEEEEESSSSEEEEE--ETTTT-EEEEEETTTTE
T ss_pred --CCeEEEEEeCCCcc-ccCcccccCCCcEEEE--ECCCC-eEEEEeCCCCc
Confidence 23455544443222 1222233445566666 41234 49999988753
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=62.94 E-value=81 Score=27.82 Aligned_cols=136 Identities=8% Similarity=0.023 Sum_probs=73.1
Q ss_pred cCeEEEEEcCCCceeeeccCC-CceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGF-PRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMP 255 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~-p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP 255 (383)
...+.+|+..++.....- .. ...... . ++.+ +|.....+..+ ..|..+|+.++....+...
T Consensus 95 dg~i~iwd~~~~~~~~~~-~~~~h~~~v-~-----~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFI-QGMGPGDAI-T-----GMKFNQFNTNQLFVSSIR--------GATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp TSCEEEEETTSTTCEEEE-CCCSTTCBE-E-----EEEEETTEEEEEEEEETT--------TEEEEEETTSCEEEEEECC
T ss_pred CCeEEEEeCCCcccceee-ecCCcCCce-e-----EEEeCCCCCCEEEEEeCC--------CEEEEEECCCCceEEEecc
Confidence 568899999887765443 21 111000 0 2222 33444433332 5899999998777766443
Q ss_pred CCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEEee
Q 016751 256 YDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGECR 333 (383)
Q Consensus 256 ~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~ 333 (383)
..... ....+... +|.+.+....+ ..+.+|.++. . .+..+.........+.+..++. +++. ..
T Consensus 160 -~~~~~-~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~----~---~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~ 224 (383)
T 3ei3_B 160 -DSWDY-WYCCVDVSVSRQMLATGDST----GRLLLLGLDG----H---EIFKEKLHKAKVTHAEFNPRCDWLMAT--SS 224 (383)
T ss_dssp -CCSSC-CEEEEEEETTTTEEEEEETT----SEEEEEETTS----C---EEEEEECSSSCEEEEEECSSCTTEEEE--EE
T ss_pred -CCCCC-CeEEEEECCCCCEEEEECCC----CCEEEEECCC----C---EEEEeccCCCcEEEEEECCCCCCEEEE--Ee
Confidence 22111 12233333 35655555544 5999999842 1 2223322111355566666676 6666 42
Q ss_pred CCceEEEEEeCCC
Q 016751 334 HGGYGLLVYNPHS 346 (383)
Q Consensus 334 ~~~~~~~~yd~~t 346 (383)
.++ .+..||+++
T Consensus 225 ~d~-~i~iwd~~~ 236 (383)
T 3ei3_B 225 VDA-TVKLWDLRN 236 (383)
T ss_dssp TTS-EEEEEEGGG
T ss_pred CCC-EEEEEeCCC
Confidence 455 489999987
No 177
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=62.81 E-value=49 Score=29.74 Aligned_cols=179 Identities=9% Similarity=-0.002 Sum_probs=72.4
Q ss_pred cCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEE-ecCeEEEEEcCCC--cee
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS-VNADAEVYSLRSN--SWK 194 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~-~~~~~~vyss~t~--~W~ 194 (383)
.+|.|.+.. .++.++.+|+.|++.+. ++..+.. . ..+. .++ +++... ....+..++.+++ .|+
T Consensus 8 ~~~~v~~gs---~dg~v~a~d~~tG~~~W~~~~~~~~-s-~p~~-------~~g-~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVST---LDGSLHAVSKRTGSIKWTLKEDPVL-Q-VPTH-------VEE-PAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEE---TTSEEEEEETTTCCEEEEEECCCSC-C-CC-------------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEc---CCCEEEEEECCCCCEEEEecCCCce-e-cceE-------cCC-CEEEEeCCCCEEEEEECCCCceeee
Confidence 466666665 46678888888876442 2221100 0 0000 001 111111 1346677777554 565
Q ss_pred eeccCCCceeeeccCcccceeE-ECceEEEEEeeccCCCCCCCcEEEEEECCCCe--eeEeCCCCCCCCCCCceEEEEeC
Q 016751 195 NIAYGFPRSIEINRSHINSSVF-LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLNVFD 271 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~-~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~~~~~~~~~l~~~~ 271 (383)
.-. ..+.. . ... ++. .+|.+|.-...+ .+.++|..+.+ |+. ..+ ... .....+
T Consensus 75 ~~~-~~~~~--~-~~s---p~~~~~~~v~~g~~dg---------~v~a~D~~tG~~~w~~-~~~-~~~------~~~p~~ 130 (369)
T 2hz6_A 75 LPF-TIPEL--V-QAS---PCRSSDGILYMGKKQD---------IWYVIDLLTGEKQQTL-SSA-FAD------SLSPST 130 (369)
T ss_dssp CSC-CHHHH--H-TTC---SCC-----CCCCEEEE---------EEEEECCC----------------------------
T ss_pred eec-cCccc--c-ccC---ceEecCCEEEEEeCCC---------EEEEEECCCCcEEEEe-cCC-Ccc------cccccC
Confidence 322 11110 1 111 333 677777644443 79999987653 432 222 111 111134
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee----CCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE----RGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~----~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+.|++... + ..+..|-.+. .+..|.....-... ..+.. ++.+++. . .++ .++++|.+|+
T Consensus 131 ~~v~~~~~-d----g~v~a~d~~t--G~~~W~~~~~~~~~------~~~~~~~~~~~~v~~~--~-~dg-~v~a~d~~tG 193 (369)
T 2hz6_A 131 SLLYLGRT-E----YTITMYDTKT--RELRWNATYFDYAA------SLPEDDVDYKMSHFVS--N-GDG-LVVTVDSESG 193 (369)
T ss_dssp --EEEEEE-E----EEEECCCSSS--SSCCCEEEEEEECC------BCCCCCTTCCCCEEEE--E-TSC-EEEEECTTTC
T ss_pred CEEEEEec-C----CEEEEEECCC--CCEEEeEecccccC------ccccCCccccceEEEE--C-CCC-EEEEEECCCC
Confidence 55555432 2 2455554443 23568764321110 11111 2567776 5 555 4999999998
Q ss_pred eEEE
Q 016751 348 TFKC 351 (383)
Q Consensus 348 ~~~~ 351 (383)
+...
T Consensus 194 ~~~W 197 (369)
T 2hz6_A 194 DVLW 197 (369)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 7543
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=61.76 E-value=71 Score=26.81 Aligned_cols=191 Identities=8% Similarity=0.118 Sum_probs=99.9
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNI 196 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~ 196 (383)
..+|.+.+... .....+.++|+..+....+..... ....++.+++. . . ++.... ...+.+|+.....-+..
T Consensus 86 ~~~g~l~v~~~-~~~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~---g-~--l~v~~~~~~~i~~~~~~g~~~~~~ 157 (286)
T 1q7f_A 86 RNSGDIIVTER-SPTHQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNK---G-R--IIVVECKVMRVIIFDQNGNVLHKF 157 (286)
T ss_dssp TTTTEEEEEEC-GGGCEEEEECTTSCEEEEECTTTC-SCEEEEEECTT---S-C--EEEEETTTTEEEEECTTSCEEEEE
T ss_pred cCCCeEEEEcC-CCCCEEEEECCCCcEEEEecCccC-CCceEEEEeCC---C-C--EEEEECCCCEEEEEcCCCCEEEEe
Confidence 46777766652 015678999965554444533211 12256667764 3 2 332222 45788888655433333
Q ss_pred ccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCe
Q 016751 197 AYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY 273 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~ 273 (383)
....... ... ++.+ +|.+|+..... ..|..||...+....+..+ ... .....++.. +|+
T Consensus 158 ~~~~~~~----~p~---~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~~~~~~~~-g~~--~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 158 GCSKHLE----FPN---GVVVNDKQEIFISDNRA--------HCVKVFNYEGQYLRQIGGE-GIT--NYPIGVGINSNGE 219 (286)
T ss_dssp ECTTTCS----SEE---EEEECSSSEEEEEEGGG--------TEEEEEETTCCEEEEESCT-TTS--CSEEEEEECTTCC
T ss_pred CCCCccC----CcE---EEEECCCCCEEEEECCC--------CEEEEEcCCCCEEEEEccC-Ccc--CCCcEEEECCCCC
Confidence 2010000 001 3333 58887765443 5899999977766655433 211 122334543 578
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
|++...... ..+.+|..+ .................-+++..+|.+|+. . .+. .+.+|+...
T Consensus 220 l~v~~~~~~---~~i~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs--~-~~~-~v~v~~~~~ 280 (286)
T 1q7f_A 220 ILIADNHNN---FNLTIFTQD-----GQLISALESKVKHAQCFDVALMDDGSVVLA--S-KDY-RLYIYRYVQ 280 (286)
T ss_dssp EEEEECSSS---CEEEEECTT-----SCEEEEEEESSCCSCEEEEEEETTTEEEEE--E-TTT-EEEEEECSC
T ss_pred EEEEeCCCC---EEEEEECCC-----CCEEEEEcccCCCCcceeEEECCCCcEEEE--C-CCC-eEEEEEccc
Confidence 888775442 267777532 222222222221102334566678888888 6 455 488887654
No 179
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=60.31 E-value=1.4e+02 Score=29.61 Aligned_cols=183 Identities=7% Similarity=0.021 Sum_probs=90.3
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.|||..+++...--.... .....+.+.|. + .+ ++.......+.||+..++.....-..........
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~---~-~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~--- 103 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTE-TPVRAGKFIAR---K-NW-IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI--- 103 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS-SCEEEEEEEGG---G-TE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE---
T ss_pred CCCEEEEEECCCCceEEEEecCC-CcEEEEEEeCC---C-CE-EEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEE---
Confidence 46778899988766543211111 11245666664 2 22 3333336789999998876533220111111100
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC-eeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCccE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE-IFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRS 287 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~-~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~ 287 (383)
...-+|.....+..+ ..|..+|+.++ ........ ... ....+.-. +|.+.++...+ ..
T Consensus 104 ---~~s~~~~~l~~~~~d--------g~i~vw~~~~~~~~~~~~~~-~~~---~v~~~~~~p~~~~~l~~~~~d----g~ 164 (814)
T 3mkq_A 104 ---AVHPTKPYVLSGSDD--------LTVKLWNWENNWALEQTFEG-HEH---FVMCVAFNPKDPSTFASGCLD----RT 164 (814)
T ss_dssp ---EECSSSSEEEEEETT--------SEEEEEEGGGTSEEEEEEEC-CSS---CEEEEEEETTEEEEEEEEETT----SE
T ss_pred ---EEeCCCCEEEEEcCC--------CEEEEEECCCCceEEEEEcC-CCC---cEEEEEEEcCCCCEEEEEeCC----Ce
Confidence 122245433333332 58999998775 33222111 111 12233333 35555555544 48
Q ss_pred EEEEEeccCCCCCCeEEEEEecCCCceeEEEEEee--CCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 288 YELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTE--RGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~--~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
+.+|.+.... ..+... ..... ....+.+.. ++..++. ...++ .+..||+++++.
T Consensus 165 v~vwd~~~~~--~~~~~~--~~~~~-~v~~~~~~~~~~~~~l~~--~~~dg-~i~~~d~~~~~~ 220 (814)
T 3mkq_A 165 VKVWSLGQST--PNFTLT--TGQER-GVNYVDYYPLPDKPYMIT--ASDDL-TIKIWDYQTKSC 220 (814)
T ss_dssp EEEEETTCSS--CSEEEE--CCCTT-CCCEEEECCSTTCCEEEE--ECTTS-EEEEEETTTTEE
T ss_pred EEEEECCCCc--ceeEEe--cCCCC-CEEEEEEEECCCCCEEEE--EeCCC-EEEEEECCCCcE
Confidence 9999886521 222221 11111 133344444 5666665 42455 499999988764
No 180
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=60.03 E-value=1.1e+02 Score=28.30 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=60.8
Q ss_pred eeEEC-----ceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccE
Q 016751 214 SVFLN-----GSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRS 287 (383)
Q Consensus 214 ~v~~~-----G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~ 287 (383)
++.++ |.|||.... ..|..+|+.+.+...+..+ .. ....++.. +|+|++...... ....
T Consensus 143 gvavd~~s~~g~Lyv~D~~---------~~I~~id~~~g~v~~~~~~-~~----~P~giavd~dG~lyVad~~~~-~~~~ 207 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR---------DAFRHVDFVNQYVDIKTTN-IG----QCADVNFTLNGDMVVVDDQSS-DTNT 207 (433)
T ss_dssp EEEECTTTTTCEEEEECBT---------SCEEEEETTTTEEEEECCC-CS----CEEEEEECTTCCEEEEECCSC-TTSE
T ss_pred eEEEccccCCCEEEEEeCC---------CCEEEEECCCCEEEEeecC-CC----CccEEEECCCCCEEEEcCCCC-cccc
Confidence 66766 899996542 3799999988888776333 11 12234443 467888775321 1122
Q ss_pred EEEEEeccCCCCCCeEE-EEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 288 YELWVMKEYGLTESWTK-LYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 288 l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
-.++...+.. ..+.. ...+.. ..-+++.. +|.||+. ....+ .++.||+++++.
T Consensus 208 gv~~~~~~~~--~~~~~~~~~~~~----P~giavd~~~G~lyv~--d~~~~-~V~~~d~~~g~~ 262 (433)
T 4hw6_A 208 GIYLFTRASG--FTERLSLCNARG----AKTCAVHPQNGKIYYT--RYHHA-MISSYDPATGTL 262 (433)
T ss_dssp EEEEECGGGT--TCCEEEEEECSS----BCCCEECTTTCCEEEC--BTTCS-EEEEECTTTCCE
T ss_pred eEEEEECCCC--eeccccccccCC----CCEEEEeCCCCeEEEE--ECCCC-EEEEEECCCCeE
Confidence 2333333211 11211 121111 22245555 6788887 52233 489999987776
No 181
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=59.03 E-value=1.1e+02 Score=27.96 Aligned_cols=207 Identities=9% Similarity=-0.072 Sum_probs=101.2
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceee--cCCCCCCC-CceeEEEeccCCCCC-CeEEEEEEecCeEEEEEcCCCc
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMT--LPRPSLNP-RYLGFGVNSVSGHLD-DFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~--LP~~~~~~-~~~~~g~d~~~~~~~-~ykVv~~~~~~~~~vyss~t~~ 192 (383)
-+.+|-.++... ..+.+++++..+.+... +....... ....+.+.|. .. .-.++.......+.+|+..++.
T Consensus 157 ~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 157 IAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD---SDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC---TTSCEEEEEEETTSCEEEEEESCTT
T ss_pred EcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCC---CCCCcEEEEEcCCCcEEEEECCCCc
Confidence 344554433332 56778888876655432 10111111 1144555542 11 2223333336688999988765
Q ss_pred eeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCC-------------
Q 016751 193 WKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDL------------- 258 (383)
Q Consensus 193 W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~------------- 258 (383)
-...-..-..... ... ... +|.+...+... ..|..+|+.+.+. ..+..+ ..
T Consensus 232 ~~~~~~~~h~~~v--~~~---~~s-d~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 232 IVDKWLFGHKHFV--SSI---CCG-KDYLLLSAGGD--------DKIFAWDWKTGKNLSTFDYN-SLIKPYLNDQHLAPP 296 (450)
T ss_dssp CEEEECCCCSSCE--EEE---EEC-STTEEEEEESS--------SEEEEEETTTCCEEEEEECH-HHHGGGCCTTSBC--
T ss_pred eeeeeecCCCCce--EEE---EEC-CCCEEEEEeCC--------CeEEEEECCCCcEeeeecch-hhhhhhhhhcccccc
Confidence 4322100010000 000 223 67666555543 5899999987653 323321 00
Q ss_pred --------CCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEE
Q 016751 259 --------STDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIR 329 (383)
Q Consensus 259 --------~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~ 329 (383)
........+... +|+..++..... ..+.||.+.+. ....+..+..+.... ....+++.. +.+++.
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~~~~-~~~~l~~~~~~~~~~-~v~~~~~~~-~~~~v~ 370 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEMSEK-QKGDLALKQIITFPY-NVISLSAHN-DEFQVT 370 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEECSS-STTCEEEEEEEECSS-CEEEEEEET-TEEEEE
T ss_pred cccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEeccC-CCCceeeccEeccCC-ceEEEEecC-CcEEEE
Confidence 000011223333 356655555333 59999999221 124567777776543 344556655 445555
Q ss_pred EEeeCC------ce--EEEEEeCCCCeEEE
Q 016751 330 GECRHG------GY--GLLVYNPHSDTFKC 351 (383)
Q Consensus 330 ~~~~~~------~~--~~~~yd~~t~~~~~ 351 (383)
.... .. .++.++.++++++.
T Consensus 371 --~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 371 --LDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp --ECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred --EecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 3111 11 58888999998863
No 182
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=57.84 E-value=97 Score=27.07 Aligned_cols=192 Identities=11% Similarity=0.078 Sum_probs=90.7
Q ss_pred eEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe----cCeEEEEEcCC--CceeeeccCCCceeeec
Q 016751 134 LIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV----NADAEVYSLRS--NSWKNIAYGFPRSIEIN 207 (383)
Q Consensus 134 ~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~----~~~~~vyss~t--~~W~~~~~~~p~~~~~~ 207 (383)
.++.+|+.+++...+... .......+.++|. + . .++.... ...+.+|+... +..+.+. ..+....
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spd---g-~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~-~~~~~~~-- 100 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPSYLIPSAD---G-K-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN-TQKTMGA-- 100 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCCSEEECTT---S-S-EEEEEECCSSTTCEEEEEEEETTTTEEEEEE-EEECSSS--
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCceEEECCC---C-C-EEEEEEccCCCCCcEEEEEEeCCCCcEEEee-EeccCCC--
Confidence 345558888877665443 1111134555554 2 2 2333322 14777776644 6666555 2221100
Q ss_pred cCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC-eeeEe----CCCC---CC-CCCCCc-eEEEEe-CCe-EE
Q 016751 208 RSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE-IFQTV----MMPY---DL-STDDAD-KYLNVF-DGY-LC 275 (383)
Q Consensus 208 ~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~-~~~~i----~lP~---~~-~~~~~~-~~l~~~-~g~-L~ 275 (383)
... .+..+|...+.+... ...+..||+.+. ....+ ...- .. ...... ..++.. +|+ |+
T Consensus 101 ~p~---~~~~dg~~l~~~~~~-------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 101 DPC---YLTTNGKNIVTANYS-------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp CEE---EEEECSSEEEEEETT-------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred CcE---EEEECCCEEEEEECC-------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 000 233377644444322 257889998643 22111 1110 00 000011 224443 465 55
Q ss_pred EEEecCCCCccEEEEEEeccCCCCC--C-eEEE-----EEecCCCceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCC
Q 016751 276 VFATIPNNTFRSYELWVMKEYGLTE--S-WTKL-----YTIEKPQRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 276 ~v~~~~~~~~~~l~iW~l~~~~~~~--~-W~~~-----~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t 346 (383)
+..... ..+.+|.++...... + .... ..+.... ....+.+..+|+ +|+. ...+. .+.+||+++
T Consensus 171 ~~~~~~----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~--~~~~~-~v~v~~~~~ 242 (361)
T 3scy_A 171 ADDLGT----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS-GPRHLIFNSDGKFAYLI--NEIGG-TVIAFRYAD 242 (361)
T ss_dssp EEETTT----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC-CEEEEEECTTSSEEEEE--ETTTC-EEEEEEEET
T ss_pred EEeCCC----CEEEEEEEcCCCCcccccceeecccccceecCCCC-CCeEEEEcCCCCEEEEE--cCCCC-eEEEEEecC
Confidence 544333 589999987532100 1 2221 1222221 244466777886 5555 31234 599999998
Q ss_pred CeEEEE
Q 016751 347 DTFKCI 352 (383)
Q Consensus 347 ~~~~~v 352 (383)
++++.+
T Consensus 243 g~~~~~ 248 (361)
T 3scy_A 243 GMLDEI 248 (361)
T ss_dssp TEEEEE
T ss_pred CceEEe
Confidence 887665
No 183
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=57.11 E-value=1.6e+02 Score=29.28 Aligned_cols=190 Identities=14% Similarity=0.156 Sum_probs=99.6
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
+....+|.|.+.. ...++.+|+.+.++.. |..........+ .+. .+ -+.+.....+..|+..+++.+
T Consensus 68 i~~d~~g~lWigT----~~Gl~~yd~~~~~f~~-~~~~~~~~i~~i-~~~----~g---~lWigt~~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 68 GVIIDNTYLYMGT----DNGILVYNYRADRYEQ-PETDFPTDVRTM-ALQ----GD---TLWLGALNGLYTYQLQSRKLT 134 (758)
T ss_dssp EEEETTTEEEEEE----TTEEEEEETTTTEECC-CSCCCCSCEEEE-EEE----TT---EEEEEETTEEEEEETTTCCEE
T ss_pred EEEcCCCcEEEEe----CCCeEEEeCCCCEEEC-cccCCCceEEEE-Eec----CC---cEEEEcCCcceeEeCCCCeEE
Confidence 3455677776665 3458899999987765 221111111112 121 11 133333347888998888877
Q ss_pred eecc---CCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCC--CCCceEE
Q 016751 195 NIAY---GFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLST--DDADKYL 267 (383)
Q Consensus 195 ~~~~---~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~--~~~~~~l 267 (383)
.... ..+.... . +++. +|.+ |++... .+..||..++++..+..| .... ......+
T Consensus 135 ~~~~~~~~l~~~~i----~---~i~~d~~g~l-Wigt~~---------Gl~~~~~~~~~~~~~~~~-~~~~~~~~~i~~i 196 (758)
T 3ott_A 135 SFDTRRNGLPNNTI----Y---SIIRTKDNQI-YVGTYN---------GLCRYIPSNGKFEGIPLP-VHSSQSNLFVNSL 196 (758)
T ss_dssp EECHHHHCCSCSCE----E---EEEECTTCCE-EEEETT---------EEEEEETTTTEEEEECCC-CCTTCSSCCEEEE
T ss_pred EeccCCCCcCCCeE----E---EEEEcCCCCE-EEEeCC---------CHhhCccCCCceEEecCC-CccccccceeEEE
Confidence 6520 1111100 0 3333 4655 555443 799999999999887666 3221 1112234
Q ss_pred EEeC-C-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCC
Q 016751 268 NVFD-G-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 268 ~~~~-g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~ 345 (383)
.+.. | .|.+... . -+..++.. ...+.....++.. ....+....+|.|++. . .++ ++.||.+
T Consensus 197 ~~d~~~~~lWigt~-~-------Gl~~~~~~--~~~~~~~~~l~~~--~i~~i~~d~~g~lWig--T-~~G--l~~~~~~ 259 (758)
T 3ott_A 197 LEDTTRQCVWIGTE-G-------YLFQYFPS--TGQIKQTEAFHNN--SIKSLALDGNGDLLAG--T-DNG--LYVYHND 259 (758)
T ss_dssp EEETTTTEEEEEEE-E-------EEEEEETT--TTEEEEEEEEEEE--EEEEEEECTTCCEEEE--E-TTE--EEEECCT
T ss_pred EEECCCCEEEEEEC-C-------CCeEEcCC--CCeEEeccCCCCC--eEEEEEEcCCCCEEEE--e-CCc--eeEEecC
Confidence 4443 3 4665442 1 13334321 2334443333211 2333444557788887 5 443 8999998
Q ss_pred CCeEEEE
Q 016751 346 SDTFKCI 352 (383)
Q Consensus 346 t~~~~~v 352 (383)
+++++.+
T Consensus 260 ~~~~~~~ 266 (758)
T 3ott_A 260 TTPLQHI 266 (758)
T ss_dssp TSCCEEE
T ss_pred CCcEEEE
Confidence 8877654
No 184
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=56.66 E-value=96 Score=26.70 Aligned_cols=205 Identities=11% Similarity=0.061 Sum_probs=96.9
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
-+.+|-+++... .++.+.|||..+++....-.... .....+.+.+. + . .++.......+.+|+..+++-...
T Consensus 40 ~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~---~-~-~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 40 YNKEGDLLFSCS--KDSSASVWYSLNGERLGTLDGHT-GTIWSIDVDCF---T-K-YCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp ECTTSCEEEEEE--SSSCEEEEETTTCCEEEEECCCS-SCEEEEEECTT---S-S-EEEEEETTTEEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEe--CCCEEEEEeCCCchhhhhhhhcC-CcEEEEEEcCC---C-C-EEEEEeCCCeEEEEECCCCcEEEE
Confidence 344555444432 56788999988876544221111 11245566553 2 2 333333366899999988754332
Q ss_pred ccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCee----eEeC-CCC----CCCCCCCceEE
Q 016751 197 AYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF----QTVM-MPY----DLSTDDADKYL 267 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~----~~i~-lP~----~~~~~~~~~~l 267 (383)
- ..+...... ...-+|.....+... .......|..||+.+..- .... -+. ..........+
T Consensus 112 ~-~~~~~v~~~------~~~~~~~~l~~~~~~---~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 112 W-KSPVPVKRV------EFSPCGNYFLAILDN---VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp E-ECSSCEEEE------EECTTSSEEEEEECC---BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred e-ecCCCeEEE------EEccCCCEEEEecCC---ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 2 111111100 122234443333221 001124677777654321 1110 000 00000011122
Q ss_pred EEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 268 NVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 268 ~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
... +|++.++...+ ..+.+|.+... ...+..+.........+.+..++..++. ...++ .+.+||+++
T Consensus 182 ~~~~~~~~l~~~~~d----g~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~-~i~v~d~~~ 249 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKD----GKISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTYFIT--SSRDT-NSFLVDVST 249 (369)
T ss_dssp EECGGGCEEEEEETT----SEEEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSEEEE--EETTS-EEEEEETTT
T ss_pred EEcCCCCEEEEEcCC----CEEEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCEEEE--ecCCc-eEEEEECCC
Confidence 222 35555555444 48999988651 2333444332212455666667776666 42455 499999998
Q ss_pred CeEEE
Q 016751 347 DTFKC 351 (383)
Q Consensus 347 ~~~~~ 351 (383)
++...
T Consensus 250 ~~~~~ 254 (369)
T 3zwl_B 250 LQVLK 254 (369)
T ss_dssp CCEEE
T ss_pred Cceee
Confidence 76543
No 185
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=56.60 E-value=96 Score=26.68 Aligned_cols=186 Identities=11% Similarity=0.068 Sum_probs=89.1
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce-eeeccCCCceee---ec
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW-KNIAYGFPRSIE---IN 207 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W-~~~~~~~p~~~~---~~ 207 (383)
...++++|+.+++....-+.... ..++.+++. + .+-++.-.....+.+|+..+++- +.+......... ..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~d---g-~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK--PFGATINNT---T-QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC--CCSEEEETT---T-TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC--cceEEECCC---C-CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 56899999998765442211111 134566654 3 33222222256889999988753 222211110000 00
Q ss_pred cCcccceeEE--Cce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEeCCe-EEEEEecCC
Q 016751 208 RSHINSSVFL--NGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVFDGY-LCVFATIPN 282 (383)
Q Consensus 208 ~~~~~~~v~~--~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~~g~-L~~v~~~~~ 282 (383)
... ++.+ +|. +|...... ...|..+|+.+.+... ++.+ .... ....+. -+|+ |++.. ..
T Consensus 142 ~~~---~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~-~~~~--~~~~~s-~dg~~l~~~~-~~- 205 (353)
T 3vgz_A 142 QPR---ELVADDATNTVYISGIGK-------ESVIWVVDGGNIKLKTAIQNT-GKMS--TGLALD-SEGKRLYTTN-AD- 205 (353)
T ss_dssp EEE---EEEEETTTTEEEEEEESS-------SCEEEEEETTTTEEEEEECCC-CTTC--CCCEEE-TTTTEEEEEC-TT-
T ss_pred CCc---eEEECCCCCEEEEEecCC-------CceEEEEcCCCCceEEEecCC-CCcc--ceEEEC-CCCCEEEEEc-CC-
Confidence 000 2223 555 55544221 2479999998776543 3422 1110 111222 2344 44443 22
Q ss_pred CCccEEEEEEeccCCCCCCeEEEEEecCC----CceeEEEEEeeCCc-EEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 283 NTFRSYELWVMKEYGLTESWTKLYTIEKP----QRIWWPLGFTERGK-IFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 283 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~----~~~~~~~~~~~~g~-i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
..+.+|-++. ......+... .....-+.+..+|+ +|+. ...+. .+..||+++++...
T Consensus 206 ---~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~~~-~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 206 ---GELITIDTAD------NKILSRKKLLDDGKEHFFINISLDTARQRAFIT--DSKAA-EVLVVDTRNGNILA 267 (353)
T ss_dssp ---SEEEEEETTT------TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE--ESSSS-EEEEEETTTCCEEE
T ss_pred ---CeEEEEECCC------CeEEEEEEcCCCCCCcccceEEECCCCCEEEEE--eCCCC-EEEEEECCCCcEEE
Confidence 4666665543 2333333321 10233356666675 5555 41234 59999999987643
No 186
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=55.47 E-value=1.3e+02 Score=27.72 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=61.7
Q ss_pred CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCe-EEEEEecCCCCccEEEEEEecc
Q 016751 218 NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY-LCVFATIPNNTFRSYELWVMKE 295 (383)
Q Consensus 218 ~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~~~l~iW~l~~ 295 (383)
+|.||+.... ..|..||+.++....+.-+ . . ....++.. +|+ |++...... ......+|...+
T Consensus 149 ~g~Lyv~d~~---------~~I~~id~~~~~v~~~~~~-~-~---~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ---------HPTRLIDFEKEYVSTVYSG-L-S---KVRTICWTHEADSMIITNDQNN-NDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT---------EEEEEEETTTTEEEEEECC-C-S---CEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGG
T ss_pred CCeEEEEeCC---------CcEEEEECCCCEEEEEecC-C-C---CcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCC
Confidence 3889987653 3899999999887766322 1 1 12234443 355 777775432 112334454443
Q ss_pred CCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 296 YGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 296 ~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
..|.....+.... ...-+++.. +|.||+. ....+ .++.||+++++...+
T Consensus 214 ----g~~~~~~~l~~~~-~p~giavdp~~g~lyv~--d~~~~-~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 214 ----SGFKVITELTKGQ-NCNGAETHPINGELYFN--SWNAG-QVFRYDFTTQETTPL 263 (430)
T ss_dssp ----GTSCSEEEEEECS-SCCCEEECTTTCCEEEE--ETTTT-EEEEEETTTTEEEEE
T ss_pred ----CceeeeeeeccCC-CceEEEEeCCCCEEEEE--ECCCC-EEEEEECCCCcEEEE
Confidence 2233111221110 122345565 7789888 52334 599999998876433
No 187
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=55.40 E-value=1.2e+02 Score=27.49 Aligned_cols=180 Identities=9% Similarity=0.076 Sum_probs=85.5
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCC----ceeeeccCCCceeee
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSN----SWKNIAYGFPRSIEI 206 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~----~W~~~~~~~p~~~~~ 206 (383)
...+...++.+++...+-+. .....++.+|+. .+ +|++... ...+..++.... ....+...-..
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~---~~--~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~---- 159 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVA---SN--RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ---- 159 (400)
T ss_dssp TTEEEEECTTSCSCEEEECS--CSCEEEEEEETT---TT--EEEEEETTTTEEEEEEC------CCCEEEECSSCS----
T ss_pred cceeEEEccCCcceeEeccc--cCcceEEeeeec---cC--ceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC----
Confidence 35666666666554443211 112267788865 33 3333332 445666666542 12222201111
Q ss_pred ccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecC
Q 016751 207 NRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIP 281 (383)
Q Consensus 207 ~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~ 281 (383)
... ++.+ +|.|||..... ..|.++|+.......+.- .... .-..+++. +|.||+.....
T Consensus 160 -~p~---glavD~~~~~lY~~d~~~--------~~I~~~~~~g~~~~~l~~--~~~~--~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 160 -APD---GLAVDWIHSNIYWTDSVL--------GTVSVADTKGVKRKTLFR--ENGS--KPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp -CEE---EEEEETTTTEEEEEETTT--------TEEEEECTTTCSEEEEEE--CSSC--CEEEEEEETTTTEEEEEECSS
T ss_pred -Ccc---cEEEEecCCceEEEECCC--------CeEEEEeCCCCceEEEEe--CCCC--CcceEEEecccCeEEEEeCCC
Confidence 111 3333 68999987654 589999998765544311 1110 12234543 57888876432
Q ss_pred CCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEE--EEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 282 NNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWP--LGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 282 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~--~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
. -.|++.+-.+. .. + .+-... ...| +++. .++.||+. ..... .+..+|++....+.+
T Consensus 224 ~-----~~I~~~~~dG~-~~--~--~~~~~~-l~~P~glavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 224 P-----AKIKKGGLNGV-DI--Y--SLVTEN-IQWPNGITLDLLSGRLYWV--DSKLH-SISSIDVNGGNRKTI 283 (400)
T ss_dssp S-----CCEEEEETTSC-SC--E--EEECSS-CSCEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCCCEEE
T ss_pred C-----CEEEEEeCCCC-cc--E--EEEECC-CCceEEEEEEeCCCEEEEE--ECCCC-EEEEEeCCCCccEEE
Confidence 2 24555554332 11 1 111111 1233 3444 34567776 41223 477788776554444
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=55.36 E-value=1.6e+02 Score=28.84 Aligned_cols=191 Identities=10% Similarity=-0.020 Sum_probs=98.1
Q ss_pred ceEEEEccCccce--eecCCCCCCC-CceeEEEeccCCCCCCeEEEEEEec-C--eEEEEEcCCCceeeeccCCCceeee
Q 016751 133 SLIYLWNPLIKKY--MTLPRPSLNP-RYLGFGVNSVSGHLDDFKVVTISVN-A--DAEVYSLRSNSWKNIAYGFPRSIEI 206 (383)
Q Consensus 133 ~~~~v~NP~t~~~--~~LP~~~~~~-~~~~~g~d~~~~~~~~ykVv~~~~~-~--~~~vyss~t~~W~~~~~~~p~~~~~ 206 (383)
.++++++..|++. +.+-..+... ...+..+.+. +.+-++..... . .+.+.+..++.|+.+. .-.....
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD----G~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~- 275 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD----GKYLFVYILRGWSENDVYWKRPGEKDFRLLV-KGVGAKY- 275 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT----SCCEEEEEEETTTEEEEEEECTTCSSCEEEE-ECSSCCE-
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC----CCEEEEEEeCCCCceEEEEEcCCCCceEEee-cCCCceE-
Confidence 3589999888762 2332222221 2244555553 35555544433 3 4455555566787766 2111110
Q ss_pred ccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCe---eeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCC
Q 016751 207 NRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI---FQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNN 283 (383)
Q Consensus 207 ~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~---~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~ 283 (383)
. .+.-+|.+|+.... ......|..+|+.+.. |..+-.+ ... .....+...+|+|++....++
T Consensus 276 ---~---~~~~~g~l~~~s~~-----~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~--~~l~~~~~~~~~lv~~~~~dg- 340 (695)
T 2bkl_A 276 ---E---VHAWKDRFYVLTDE-----GAPRQRVFEVDPAKPARASWKEIVPE-DSS--ASLLSVSIVGGHLSLEYLKDA- 340 (695)
T ss_dssp ---E---EEEETTEEEEEECT-----TCTTCEEEEEBTTBCSGGGCEEEECC-CSS--CEEEEEEEETTEEEEEEEETT-
T ss_pred ---E---EEecCCcEEEEECC-----CCCCCEEEEEeCCCCCccCCeEEecC-CCC--CeEEEEEEECCEEEEEEEECC-
Confidence 1 34456776665432 1234689999997654 6665333 211 111224445888877776654
Q ss_pred CccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEEEEEeeCC-cEEEEEEeeCCc-eEEEEEeCCCCeEEEEE
Q 016751 284 TFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPLGFTERG-KIFIRGECRHGG-YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 284 ~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~~~~~~g-~i~~~~~~~~~~-~~~~~yd~~t~~~~~v~ 353 (383)
..+||.++-.+ . ....+..... ....+....++ .+++.... ... ..++.||+++++.+.+.
T Consensus 341 ---~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss-~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 341 ---TSEVRVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTS-FTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp ---EEEEEEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEE-TTEEEEEEEEETTTCCEEEEE
T ss_pred ---EEEEEEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcC-CCCCCEEEEEECCCCcEEEEe
Confidence 78889887422 1 2344543311 12222223344 45554111 111 26999999998876553
No 189
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.28 E-value=1.1e+02 Score=26.72 Aligned_cols=195 Identities=11% Similarity=0.053 Sum_probs=97.9
Q ss_pred EEccCceEEEeecCCCCceEEEEccCc----cc-eeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcC
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLI----KK-YMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLR 189 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t----~~-~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~ 189 (383)
....+|.|...+. ....++..++.+ .. ...++..-. ...++.+|+. .+ +++.... ...+++++..
T Consensus 37 ~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~--~p~glavd~~---~~--~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 37 TEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQ--APDGLAVDWI---HS--NIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp EETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCS--CCCEEEEETT---TT--EEEEEETTTTEEEEEETT
T ss_pred EEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCCC--CcCEEEEeec---CC--eEEEEECCCCEEEEEeCC
Confidence 3445777877774 567888888876 22 222332111 1146777764 33 2333222 5578888876
Q ss_pred CCceeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCce
Q 016751 190 SNSWKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADK 265 (383)
Q Consensus 190 t~~W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~ 265 (383)
...=+.+. ..... ... ++.+ +|.+||..... ...|..+|+....-..+ .-. .. ...
T Consensus 108 g~~~~~~~-~~~~~----~P~---~iavdp~~g~ly~~d~~~-------~~~I~~~~~dG~~~~~~~~~~---~~--~P~ 167 (316)
T 1ijq_A 108 GVKRKTLF-RENGS----KPR---AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSLVTEN---IQ--WPN 167 (316)
T ss_dssp SSSEEEEE-ECTTC----CEE---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEEECSS---CS--CEE
T ss_pred CCceEEEE-ECCCC----Ccc---eEEeCCCCCEEEEEccCC-------CCeEEEEcCCCCCeEEEEECC---CC--Cce
Confidence 54333222 11100 111 3333 68999976431 24899999875544433 211 10 123
Q ss_pred EEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEE
Q 016751 266 YLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVY 342 (383)
Q Consensus 266 ~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~y 342 (383)
.++.. +++||++..... . |++.+-.+. .. ..+..... . ...|.++. .++.+|+. . .+...+..+
T Consensus 168 gla~d~~~~~lY~~D~~~~----~--I~~~d~dg~-~~-~~~~~~~~-~-~~~P~giav~~~~ly~~--d-~~~~~V~~~ 234 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLH----S--ISSIDVNGG-NR-KTILEDEK-R-LAHPFSLAVFEDKVFWT--D-IINEAIFSA 234 (316)
T ss_dssp EEEEETTTTEEEEEETTTT----E--EEEEETTSC-SC-EEEEECTT-T-TSSEEEEEEETTEEEEE--E-TTTTEEEEE
T ss_pred EEEEeccCCEEEEEECCCC----e--EEEEecCCC-ce-EEEeecCC-c-cCCcEEEEEECCEEEEE--E-CCCCeEEEE
Confidence 45554 688998876543 3 444443221 11 22222211 1 12344433 35678887 5 333359999
Q ss_pred eCCCCeE-EEE
Q 016751 343 NPHSDTF-KCI 352 (383)
Q Consensus 343 d~~t~~~-~~v 352 (383)
|+.+++. +.+
T Consensus 235 ~~~~g~~~~~i 245 (316)
T 1ijq_A 235 NRLTGSDVNLL 245 (316)
T ss_dssp ETTTCCCCEEE
T ss_pred eCCCCcceEEE
Confidence 9987663 444
No 190
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=55.11 E-value=92 Score=25.98 Aligned_cols=195 Identities=9% Similarity=0.010 Sum_probs=100.5
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKN 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~ 195 (383)
+..+|.|.+.+. ....+.++++.++....+-+... ....++.+|+. ++ +++.... ...+.+++.....-+.
T Consensus 44 d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~---~~--~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 44 DCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHL---GR--TIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp ETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETT---TT--EEEEEETTTTEEEEEETTSCSCEE
T ss_pred ecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECCC-CCccEEEEEec---CC--eEEEEECCCCEEEEEEcCCCCEEE
Confidence 445777877764 56788999988765433321110 11256777764 33 2222222 5578888876543333
Q ss_pred eccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEe-
Q 016751 196 IAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~- 270 (383)
+. .... .... ++.+ +|.+||..... ....|..+++.......+ ..+ .. ....++..
T Consensus 116 ~~-~~~~----~~P~---~i~vd~~~g~lyv~~~~~------~~~~I~~~~~dg~~~~~~~~~~--~~---~P~gia~d~ 176 (267)
T 1npe_A 116 LF-DTGL----VNPR---GIVTDPVRGNLYWTDWNR------DNPKIETSHMDGTNRRILAQDN--LG---LPNGLTFDA 176 (267)
T ss_dssp EE-CSSC----SSEE---EEEEETTTTEEEEEECCS------SSCEEEEEETTSCCCEEEECTT--CS---CEEEEEEET
T ss_pred EE-ECCC----CCcc---EEEEeeCCCEEEEEECCC------CCcEEEEEecCCCCcEEEEECC--CC---CCcEEEEcC
Confidence 22 1110 0111 3433 68999987541 124788999876544433 222 11 12234443
Q ss_pred -CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 271 -DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 271 -~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+++||++..... . |++++-.+ . .....+... ..|.++. +++.+|+. . .+...+..+|+++++
T Consensus 177 ~~~~lyv~d~~~~----~--I~~~~~~g--~--~~~~~~~~~---~~P~gi~~d~~~lyva--~-~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 177 FSSQLCWVDAGTH----R--AECLNPAQ--P--GRRKVLEGL---QYPFAVTSYGKNLYYT--D-WKTNSVIAMDLAISK 240 (267)
T ss_dssp TTTEEEEEETTTT----E--EEEEETTE--E--EEEEEEECC---CSEEEEEEETTEEEEE--E-TTTTEEEEEETTTTE
T ss_pred CCCEEEEEECCCC----E--EEEEecCC--C--ceEEEecCC---CCceEEEEeCCEEEEE--E-CCCCeEEEEeCCCCC
Confidence 468888876543 3 44444321 1 111112211 2333433 35678887 5 332259999999887
Q ss_pred EE-EEEE
Q 016751 349 FK-CIGV 354 (383)
Q Consensus 349 ~~-~v~~ 354 (383)
.. .+..
T Consensus 241 ~~~~i~~ 247 (267)
T 1npe_A 241 EMDTFHP 247 (267)
T ss_dssp EEEEECC
T ss_pred ceEEEcc
Confidence 54 4443
No 191
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=55.02 E-value=71 Score=31.69 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=59.3
Q ss_pred eeEECceEEEEEeeccCCCCCCCcEEEEEECC--CCeeeEe-CCCCCC-----CCCCCceEEEEeCCeEEEEEecCCCCc
Q 016751 214 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFA--KEIFQTV-MMPYDL-----STDDADKYLNVFDGYLCVFATIPNNTF 285 (383)
Q Consensus 214 ~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~--~~~~~~i-~lP~~~-----~~~~~~~~l~~~~g~L~~v~~~~~~~~ 285 (383)
++..+|.+|...... .+.++|.. ++.|+.- ..+ .. +.+.....++..+|+|++... +
T Consensus 66 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d---- 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGPFS---------VVYALDARDGRLIWKYDPQSD-RHRAGEACCDAVNRGVAVWKGKVYVGVL-D---- 130 (689)
T ss_dssp CEEETTEEEEECGGG---------CEEEEETTTCCEEEEECCCCC-GGGGGGCTTCSCCCCCEEETTEEEEECT-T----
T ss_pred CEEECCEEEEEcCCC---------eEEEEECCCCceeEEEcCCCC-ccccccccccCCCCccEEECCEEEEEcc-C----
Confidence 788999999976654 79999986 4567642 222 10 001011223456677766542 2
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCc---eeEEEEEeeCCcEEEEEEeeC-----CceEEEEEeCCCCeEE
Q 016751 286 RSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTERGKIFIRGECRH-----GGYGLLVYNPHSDTFK 350 (383)
Q Consensus 286 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~g~i~~~~~~~~-----~~~~~~~yd~~t~~~~ 350 (383)
..+..+-.+. .+..|......+.... ...|+. .+|.||+. ... ++ .++.||.+|++..
T Consensus 131 g~l~AlDa~T--G~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg--~~~~~~~~~g-~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 131 GRLEAIDAKT--GQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIG--NGGAEFGVRG-YVTAYDAETGKEA 196 (689)
T ss_dssp SEEEEEETTT--CCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEEC--CBCTTTCCBC-EEEEEETTTCCEE
T ss_pred CEEEEEECCC--CCEeeeecCcCCCCCCccccCCcEE--ECCEEEEE--eCCCccCCCC-EEEEEECCCCcEE
Confidence 2333333322 2345665432111100 122322 35666664 311 23 5999999998854
No 192
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=54.48 E-value=1.1e+02 Score=26.85 Aligned_cols=193 Identities=7% Similarity=-0.039 Sum_probs=92.5
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
-+.+|-.++... .++.+.+||..+++....-.... .....+.+.+. .. ..++.......+.+|+.++++-...
T Consensus 135 ~spdg~~l~sgs--~d~~i~iwd~~~~~~~~~~~~h~-~~V~~~~~~~~---~~-~~l~s~s~D~~v~iwd~~~~~~~~~ 207 (344)
T 4gqb_B 135 VLSSGTQAVSGS--KDICIKVWDLAQQVVLSSYRAHA-AQVTCVAASPH---KD-SVFLSCSEDNRILLWDTRCPKPASQ 207 (344)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCS-SCEEEEEECSS---CT-TEEEEEETTSCEEEEETTSSSCEEE
T ss_pred ECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCcC-CceEEEEecCC---CC-Cceeeeccccccccccccccceeee
Confidence 355666555543 67789999998887654322111 11244555554 32 2333333356889999987654321
Q ss_pred ccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEe-C
Q 016751 197 AYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVF-D 271 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~-~ 271 (383)
- ....... ... ++.+ ++.+...+..+ ..|..+|+.+.+- ..+... .. ....++-. +
T Consensus 208 ~-~~~~~~~--~~~---~~~~~p~~~~~l~sg~~d--------g~v~~wd~~~~~~~~~~~~h-~~----~v~~v~fsp~ 268 (344)
T 4gqb_B 208 I-GCSAPGY--LPT---SLAWHPQQSEVFVFGDEN--------GTVSLVDTKSTSCVLSSAVH-SQ----CVTGLVFSPH 268 (344)
T ss_dssp C-C----CC--CEE---EEEECSSCTTEEEEEETT--------SEEEEEESCC--CCEEEECC-SS----CEEEEEECSS
T ss_pred e-ecceeec--cce---eeeecCCCCcceEEeccC--------CcEEEEECCCCcEEEEEcCC-CC----CEEEEEEccC
Confidence 1 1111000 000 2222 34444443333 4788899986543 222211 11 12233333 3
Q ss_pred C-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 272 G-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 272 g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
| ++.+.+..+ ..+.||-++. . .......... ....+++..+| .++.. ...++. +.++++.++..
T Consensus 269 g~~~lasgs~D----~~i~vwd~~~----~--~~~~~~~H~~-~V~~v~~sp~~~~llas--~s~D~~-v~~w~v~~~~~ 334 (344)
T 4gqb_B 269 SVPFLASLSED----CSLAVLDSSL----S--ELFRSQAHRD-FVRDATWSPLNHSLLTT--VGWDHQ-VVHHVVPTEPL 334 (344)
T ss_dssp SSCCEEEEETT----SCEEEECTTC----C--EEEEECCCSS-CEEEEEECSSSTTEEEE--EETTSC-EEEEECCC---
T ss_pred CCeEEEEEeCC----CeEEEEECCC----C--cEEEEcCCCC-CEEEEEEeCCCCeEEEE--EcCCCe-EEEEECCCCCC
Confidence 4 444444444 5899996543 1 2222222222 35556666555 46655 435664 99999988654
No 193
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=54.16 E-value=1.1e+02 Score=26.56 Aligned_cols=204 Identities=13% Similarity=0.088 Sum_probs=96.5
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCcc--ceeecCCCCC-----C--CCceeEEEeccCCCCCCeEEEEEEecCeEEE
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIK--KYMTLPRPSL-----N--PRYLGFGVNSVSGHLDDFKVVTISVNADAEV 185 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~--~~~~LP~~~~-----~--~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~v 185 (383)
+....+|-|.+.+. ....+.++|+..+ ....+..... . ....++.+++. .+...|.--.....+.+
T Consensus 96 ia~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~---~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 96 LSIDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS---TGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT---TCCEEEEECSSCCEEEE
T ss_pred EEECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC---CCeEEEEeCCCCCeEEE
Confidence 33445676666663 5668888998665 3333432110 0 11267888874 33322221112567888
Q ss_pred EEcCCCceeeecc--CC--CceeeeccCcccceeEE--C-ceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCC
Q 016751 186 YSLRSNSWKNIAY--GF--PRSIEINRSHINSSVFL--N-GSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYD 257 (383)
Q Consensus 186 yss~t~~W~~~~~--~~--p~~~~~~~~~~~~~v~~--~-G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~ 257 (383)
|+.....-+.+.. .- +..-...... ++.+ + |.+|+..... ..|..||+.+.++ ..+..+ .
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~---gia~d~~~g~l~v~d~~~--------~~I~~~~~~~G~~~~~~~~~-~ 238 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPH---SLALVPHLDQLCVADREN--------GRIQCFKTDTKEFVREIKHA-S 238 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEE---EEEEETTTTEEEEEETTT--------TEEEEEETTTCCEEEEECCT-T
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCc---EEEEECCCCEEEEEECCC--------CEEEEEECCCCcEEEEEecc-c
Confidence 8854332222220 00 0000111112 5555 4 8898876554 6899999986555 444444 2
Q ss_pred CCCCCCceEEEEeCCeEEEEEecCC---CCccEEEEEEeccCCCCCCeEEEEEec--CCCc-eeEEEEEeeCCcEEEEEE
Q 016751 258 LSTDDADKYLNVFDGYLCVFATIPN---NTFRSYELWVMKEYGLTESWTKLYTIE--KPQR-IWWPLGFTERGKIFIRGE 331 (383)
Q Consensus 258 ~~~~~~~~~l~~~~g~L~~v~~~~~---~~~~~l~iW~l~~~~~~~~W~~~~~i~--~~~~-~~~~~~~~~~g~i~~~~~ 331 (383)
... ....++...|.++...+... .....+.+|.++. .+.. ..+. ...+ ...-+++..+|.||+.
T Consensus 239 ~~~--~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~----g~~~--~~~~~~~~~~~~p~~ia~~~dG~lyva-- 308 (329)
T 3fvz_A 239 FGR--NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS----GEII--DVFKPVRKHFDMPHDIVASEDGTVYIG-- 308 (329)
T ss_dssp TTT--CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT----CCEE--EEECCSSSCCSSEEEEEECTTSEEEEE--
T ss_pred cCC--CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC----CeEE--EEEcCCCCccCCeeEEEECCCCCEEEE--
Confidence 211 11233333455554443211 1123566666543 2222 2332 1111 2334556667777777
Q ss_pred eeCCceEEEEEeCCC
Q 016751 332 CRHGGYGLLVYNPHS 346 (383)
Q Consensus 332 ~~~~~~~~~~yd~~t 346 (383)
..... .+..|+++.
T Consensus 309 d~~~~-~I~~~~~~~ 322 (329)
T 3fvz_A 309 DAHTN-TVWKFTLTE 322 (329)
T ss_dssp ESSSC-CEEEEEEEE
T ss_pred ECCCC-EEEEEeCCc
Confidence 42233 366666543
No 194
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=54.01 E-value=59 Score=27.90 Aligned_cols=50 Identities=4% Similarity=0.073 Sum_probs=26.7
Q ss_pred cCeEEEEEcC-CCceeeeccCCCceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCCC
Q 016751 180 NADAEVYSLR-SNSWKNIAYGFPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKE 247 (383)
Q Consensus 180 ~~~~~vyss~-t~~W~~~~~~~p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~~ 247 (383)
...+..|+.. ...|+... ..+. ... .+.. +|.+|. +... ..+.+||...+
T Consensus 116 ~~~l~~~d~~g~~~~~~~~-~~~~----~~~----~~~~~~g~l~v-gt~~--------~~l~~~d~~g~ 167 (330)
T 3hxj_A 116 DGHLYAINTDGTEKWRFKT-KKAI----YAT----PIVSEDGTIYV-GSND--------NYLYAINPDGT 167 (330)
T ss_dssp TSEEEEECTTSCEEEEEEC-SSCC----CSC----CEECTTSCEEE-ECTT--------SEEEEECTTSC
T ss_pred CCEEEEEcCCCCEEEEEcC-CCce----eee----eEEcCCCEEEE-EcCC--------CEEEEECCCCC
Confidence 3467778776 33576543 2111 111 2333 677665 3332 48999999833
No 195
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=53.85 E-value=1e+02 Score=26.16 Aligned_cols=194 Identities=12% Similarity=0.159 Sum_probs=94.1
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee-e
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK-N 195 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~-~ 195 (383)
-+.+|-+++... .++.+.+||..+++....-.... .....+.+.+. . . .++.......+.+|+.+++.-. .
T Consensus 73 ~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~---~-~-~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 73 WSSDSNLLVSAS--DDKTLKIWDVSSGKCLKTLKGHS-NYVFCCNFNPQ---S-N-LIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSS---S-S-EEEEEETTSCEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEC--CCCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCC---C-C-EEEEEeCCCcEEEEECCCCEEEEE
Confidence 344555544443 57789999988776443211110 11144555554 2 2 2333333668899999876432 1
Q ss_pred eccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-CCe
Q 016751 196 IAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DGY 273 (383)
Q Consensus 196 ~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~-~g~ 273 (383)
+. ......... ...-+|.+...+... ..|..||+.+.+... +... ... ....+.-. +|+
T Consensus 145 ~~-~~~~~v~~~------~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 205 (312)
T 4ery_A 145 LP-AHSDPVSAV------HFNRDGSLIVSSSYD--------GLCRIWDTASGQCLKTLIDD-DNP---PVSFVKFSPNGK 205 (312)
T ss_dssp EC-CCSSCEEEE------EECTTSSEEEEEETT--------SCEEEEETTTCCEEEEECCS-SCC---CEEEEEECTTSS
T ss_pred ec-CCCCcEEEE------EEcCCCCEEEEEeCC--------CcEEEEECCCCceeeEEecc-CCC---ceEEEEECCCCC
Confidence 11 111111100 112245554444433 478899998765432 2221 111 11223333 355
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc---eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR---IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
..++...+ ..+.+|.+... .....+..... .........++..++. ...++ .+.+||+++++..
T Consensus 206 ~l~~~~~d----~~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg-~i~vwd~~~~~~~ 272 (312)
T 4ery_A 206 YILAATLD----NTLKLWDYSKG------KCLKTYTGHKNEKYCIFANFSVTGGKWIVS--GSEDN-LVYIWNLQTKEIV 272 (312)
T ss_dssp EEEEEETT----TEEEEEETTTT------EEEEEECSSCCSSSCCCEEEECSSSCEEEE--CCTTS-CEEEEETTTCCEE
T ss_pred EEEEEcCC----CeEEEEECCCC------cEEEEEEecCCceEEEEEEEEeCCCcEEEE--ECCCC-EEEEEECCCchhh
Confidence 55555544 48999988652 22222221110 1111122245566666 42455 4999999998754
No 196
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=53.27 E-value=1.2e+02 Score=26.88 Aligned_cols=97 Identities=8% Similarity=0.083 Sum_probs=49.0
Q ss_pred cEEEEEECCCCe--eeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeE----EEEEecC
Q 016751 237 WLIVSFDFAKEI--FQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWT----KLYTIEK 310 (383)
Q Consensus 237 ~~il~fD~~~~~--~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~----~~~~i~~ 310 (383)
..|..+|+.+.. ...+... ... ....+...+|++.+....+ ..+.+|.+........-. .......
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~-~~~---~v~~~~~~~~~~l~s~~~d----~~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 384 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLIN-EGT---PINNVYFAAGALFVSSGFD----TSIKLDIISDPESERPAIEFETPTFLVSN 384 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEES-TTS---CEEEEEEETTEEEEEETTT----EEEEEEEECCTTCCSCEECTTSCEEECCS
T ss_pred CeEEEEEcCCCcCchhhhhcc-CCC---CceEEEeCCCCEEEEecCC----ccEEEEeccCCCCCccceeccCccEEccC
Confidence 589999998753 2333221 111 1223344467765555444 599999998632111000 0001111
Q ss_pred CCceeEEEEEeeCCc----EEEEEEeeCCceEEEEEeCCC
Q 016751 311 PQRIWWPLGFTERGK----IFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 311 ~~~~~~~~~~~~~g~----i~~~~~~~~~~~~~~~yd~~t 346 (383)
.. ....+++..++. ++.. . ..+ .+..|+++.
T Consensus 385 ~~-~v~~~~~s~~~~~~g~l~a~--g-~~g-~~~~~~~~~ 419 (420)
T 3vl1_A 385 DD-AVSQFCYVSDDESNGEVLEV--G-KNN-FCALYNLSN 419 (420)
T ss_dssp SC-CCCEEEEECCSSSSCEEEEE--E-TTT-EEEEEESCC
T ss_pred Cc-ceEEEEEccCCCCcceEEEE--c-CCc-eEEEEeccC
Confidence 11 233355555555 6666 4 555 488888764
No 197
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=52.73 E-value=1.3e+02 Score=27.16 Aligned_cols=187 Identities=9% Similarity=-0.011 Sum_probs=94.8
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe--cCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV--NADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~--~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
..++++|..+++...+...+. ....+.+.|. +.+-++.... ...+.+++..++..+.+. .........
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spd----g~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~--- 272 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPD----GSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEP--- 272 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTT----SSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEE---
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCC----CCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCcccce---
Confidence 589999999988877654332 1244556553 2232222221 456888999888776554 222111100
Q ss_pred ccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEE
Q 016751 211 INSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSY 288 (383)
Q Consensus 211 ~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l 288 (383)
...-+|. +++..... ....|..+|+.+.....+... . . ....+.-. +|+..++..... +...+
T Consensus 273 ---~~spdg~~l~~~s~~~------g~~~i~~~d~~~~~~~~l~~~-~-~---~~~~~~~spdG~~l~~~~~~~-g~~~i 337 (415)
T 2hqs_A 273 ---TWFPDSQNLAFTSDQA------GRPQVYKVNINGGAPQRITWE-G-S---QNQDADVSSDGKFMVMVSSNG-GQQHI 337 (415)
T ss_dssp ---EECTTSSEEEEEECTT------SSCEEEEEETTSSCCEECCCS-S-S---EEEEEEECTTSSEEEEEEECS-SCEEE
T ss_pred ---EECCCCCEEEEEECCC------CCcEEEEEECCCCCEEEEecC-C-C---cccCeEECCCCCEEEEEECcC-CceEE
Confidence 1222565 44443221 234788899988765443222 1 1 11223322 455433333322 11356
Q ss_pred EEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc-eEEEEEeCCCCeEEEEE
Q 016751 289 ELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG-YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 289 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~-~~~~~yd~~t~~~~~v~ 353 (383)
.+|.++. .+.. .+.... ......+..+|..++.... +++ ..++.+|++++..+.+.
T Consensus 338 ~~~d~~~----~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~-~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 338 AKQDLAT----GGVQ---VLSSTF-LDETPSLAPNGTMVIYSSS-QGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEETTT----CCEE---ECCCSS-SCEEEEECTTSSEEEEEEE-ETTEEEEEEEETTSCCEEECC
T ss_pred EEEECCC----CCEE---EecCCC-CcCCeEEcCCCCEEEEEEc-CCCccEEEEEECCCCcEEEee
Confidence 6666553 2222 222111 2444566677765444222 222 25999999988877763
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=52.64 E-value=1.1e+02 Score=26.15 Aligned_cols=102 Identities=12% Similarity=0.178 Sum_probs=53.9
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEec------CeEEEEEcCCCceeeec--cCCCcee
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVN------ADAEVYSLRSNSWKNIA--YGFPRSI 204 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~------~~~~vyss~t~~W~~~~--~~~p~~~ 204 (383)
..++.+||.+++...+. .. ....++.+++. .. .++..... ..+.+|+..++...... ...+..
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~-~~p~gl~~spd---g~--~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~- 239 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL-DHPNGLAFSPD---EQ--TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG- 239 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE-SSEEEEEECTT---SS--EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-
T ss_pred CeEEEEcCCCCcEEEEe--cC-CCCcceEEcCC---CC--EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-
Confidence 56888898887766653 11 11145566554 22 22222222 46788887655421111 011110
Q ss_pred eeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCC
Q 016751 205 EINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDL 258 (383)
Q Consensus 205 ~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~ 258 (383)
... .-.+--+|.+ |++... .|..||+..+....+.+| ..
T Consensus 240 ---~pd-gi~~d~~G~l-wv~~~~---------gv~~~~~~g~~~~~~~~~-~~ 278 (305)
T 3dr2_A 240 ---LPD-GFCVDRGGWL-WSSSGT---------GVCVFDSDGQLLGHIPTP-GT 278 (305)
T ss_dssp ---CCC-SEEECTTSCE-EECCSS---------EEEEECTTSCEEEEEECS-SC
T ss_pred ---CCC-eEEECCCCCE-EEecCC---------cEEEECCCCCEEEEEECC-Cc
Confidence 001 0023345885 444433 799999988888888888 53
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=52.37 E-value=1.1e+02 Score=26.03 Aligned_cols=146 Identities=7% Similarity=0.006 Sum_probs=73.6
Q ss_pred cCeEEEEEcCCC--ceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCC
Q 016751 180 NADAEVYSLRSN--SWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYD 257 (383)
Q Consensus 180 ~~~~~vyss~t~--~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~ 257 (383)
...+.+++.+++ .|+.-. .-..... .. .+.-+|.++. ... ..|..||+..+.-..+..| .
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~-~~~~~~~---~~---~~~pdG~ilv-s~~---------~~V~~~d~~G~~~W~~~~~-~ 75 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPL-EKGWECN---SV---AATKAGEILF-SYS---------KGAKMITRDGRELWNIAAP-A 75 (276)
T ss_dssp CSEEEEEETTTTEEEEEEEC-CTTCCCC---EE---EECTTSCEEE-ECB---------SEEEEECTTSCEEEEEECC-T
T ss_pred CCEEEEEECCCCeEEEEeCC-CccCCCc---Ce---EECCCCCEEE-eCC---------CCEEEECCCCCEEEEEcCC-C
Confidence 668888998776 587654 2110111 00 3444788777 433 3799999954433444444 2
Q ss_pred CCCCCCceEEEE-eCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC--ceeEEEEEeeCCcEEEEEEeeC
Q 016751 258 LSTDDADKYLNV-FDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ--RIWWPLGFTERGKIFIRGECRH 334 (383)
Q Consensus 258 ~~~~~~~~~l~~-~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~~~~~~~~~~~g~i~~~~~~~~ 334 (383)
... ...... .+|+++++.... .-.++.++..+ +..|.....-.... .....+....+|++++. ...
T Consensus 76 ~~~---~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~--~~~ 144 (276)
T 3no2_A 76 GCE---MQTARILPDGNALVAWCGH-----PSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVP--LFA 144 (276)
T ss_dssp TCE---EEEEEECTTSCEEEEEEST-----TEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE--ETT
T ss_pred Ccc---ccccEECCCCCEEEEecCC-----CCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEE--ecC
Confidence 221 112222 356776665542 23455565422 23344322111100 01222345567888777 523
Q ss_pred CceEEEEEeCCCCeEEEEEEe
Q 016751 335 GGYGLLVYNPHSDTFKCIGVH 355 (383)
Q Consensus 335 ~~~~~~~yd~~t~~~~~v~~~ 355 (383)
++ .+.+||++.+.+.++...
T Consensus 145 ~~-~v~~~d~~G~~~w~~~~~ 164 (276)
T 3no2_A 145 TS-EVREIAPNGQLLNSVKLS 164 (276)
T ss_dssp TT-EEEEECTTSCEEEEEECS
T ss_pred CC-EEEEECCCCCEEEEEECC
Confidence 45 599999995444455443
No 200
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=51.54 E-value=1.1e+02 Score=25.92 Aligned_cols=59 Identities=7% Similarity=-0.085 Sum_probs=32.1
Q ss_pred CCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 131 DRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
....+.++|+.+++... ++..........+.+++. + .+-++.......+.+|+..+++-
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d---g-~~l~v~~~~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG---G-RIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTT---S-SEEEEEETTTTEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCC---C-CEEEEEeCCCCeEEEEECCCCCe
Confidence 56788999998876543 322211000134555554 2 23333222255889999888754
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=51.53 E-value=1.7e+02 Score=28.09 Aligned_cols=31 Identities=6% Similarity=0.126 Sum_probs=21.4
Q ss_pred eeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc
Q 016751 158 LGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS 192 (383)
Q Consensus 158 ~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~ 192 (383)
..+++++. +.|-++.-.....+.|++..+++
T Consensus 345 ~d~~~~pd----gr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 345 HDGGLDGS----HRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEECTT----SCEEEEEEGGGTEEEEEETTTTE
T ss_pred cCceECCC----CCEEEEEeCCCCeEEEEECCCCc
Confidence 46778774 45555554447789999999874
No 202
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=51.48 E-value=1.2e+02 Score=26.13 Aligned_cols=196 Identities=13% Similarity=0.154 Sum_probs=96.1
Q ss_pred ceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeecc--
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAY-- 198 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~-- 198 (383)
|-+++... .++.+.++|..+++....-.. .......+.+.|. ... .++.......+.+|+.+++.-...-.
T Consensus 85 ~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~---~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 85 HPLLAVAG--SRGIIRIINPITMQCIKHYVG-HGNAINELKFHPR---DPN-LLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp CEEEEEEE--TTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSS---CTT-EEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred CCEEEEec--CCCEEEEEEchhceEeeeecC-CCCcEEEEEECCC---CCC-EEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 44444442 677899999988765442211 1112256667663 233 33333336689999998875432210
Q ss_pred -CCCceeeeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eC--------------------C
Q 016751 199 -GFPRSIEINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VM--------------------M 254 (383)
Q Consensus 199 -~~p~~~~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~--------------------l 254 (383)
....... ++. -+|.....+..+ ..|..||+.+.+... +. .
T Consensus 158 ~~~~~~v~--------~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 158 EGHRDEVL--------SADYDLLGEKIMSCGMD--------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp TSCSSCEE--------EEEECTTSSEEEEEETT--------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred ccccCcee--------EEEECCCCCEEEEecCC--------CCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 1111111 122 235444434332 478889988654311 00 0
Q ss_pred CCCC----CCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCC--------CCCeEEEEEecCCCceeEEEEEee
Q 016751 255 PYDL----STDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGL--------TESWTKLYTIEKPQRIWWPLGFTE 322 (383)
Q Consensus 255 P~~~----~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~~~~~~~ 322 (383)
| .. ........+.-. |.+.+....+ ..+.+|.+..... ......+..+.........+.+..
T Consensus 222 ~-~~~~~~~~~~~v~~~~~~-~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (366)
T 3k26_A 222 P-DFSTRDIHRNYVDCVRWL-GDLILSKSCE----NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM 295 (366)
T ss_dssp C-SEEECSSCSSCCCEEEEE-TTEEEEECSS----SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE
T ss_pred C-ccccccCCcceEEEEEEc-CCEEEEEecC----CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC
Confidence 0 00 000011223333 5555555444 5899999865311 112233333332211122344455
Q ss_pred C--CcEEEEEEeeCCceEEEEEeCCCCe
Q 016751 323 R--GKIFIRGECRHGGYGLLVYNPHSDT 348 (383)
Q Consensus 323 ~--g~i~~~~~~~~~~~~~~~yd~~t~~ 348 (383)
+ |.+++. ...++ .+.+||+++++
T Consensus 296 ~~~~~~l~~--~~~dg-~i~vwd~~~~~ 320 (366)
T 3k26_A 296 DFWQKMLAL--GNQVG-KLYVWDLEVED 320 (366)
T ss_dssp CTTSSEEEE--ECTTS-CEEEEECCSSS
T ss_pred CCCCcEEEE--EecCC-cEEEEECCCCC
Confidence 5 777776 42455 49999999874
No 203
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=51.00 E-value=1.5e+02 Score=27.26 Aligned_cols=131 Identities=10% Similarity=0.076 Sum_probs=67.0
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-----cCeEEEEEcCCCcee
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-----NADAEVYSLRSNSWK 194 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-----~~~~~vyss~t~~W~ 194 (383)
+|.|.+.+. . ..+.+++|.+++...+..... ...++.+++. .. ++.... ...+..++. .+.|.
T Consensus 152 ~g~Lyv~D~--~-~~I~~id~~~g~v~~~~~~~~--~P~giavd~d---G~---lyVad~~~~~~~~gv~~~~~-~~~~~ 219 (433)
T 4hw6_A 152 YDDLYWVGQ--R-DAFRHVDFVNQYVDIKTTNIG--QCADVNFTLN---GD---MVVVDDQSSDTNTGIYLFTR-ASGFT 219 (433)
T ss_dssp TCEEEEECB--T-SCEEEEETTTTEEEEECCCCS--CEEEEEECTT---CC---EEEEECCSCTTSEEEEEECG-GGTTC
T ss_pred CCEEEEEeC--C-CCEEEEECCCCEEEEeecCCC--CccEEEECCC---CC---EEEEcCCCCcccceEEEEEC-CCCee
Confidence 588877763 2 788899998888777654211 2266777775 43 222221 112222322 22232
Q ss_pred eeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEe-CCCCCCCCCCCceEEEE
Q 016751 195 NIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTV-MMPYDLSTDDADKYLNV 269 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i-~lP~~~~~~~~~~~l~~ 269 (383)
... ..+ ...... ++.+ +|.||+..... ..|..||+.+... ..+ ... ... ....++.
T Consensus 220 ~~~-~~~---~~~~P~---giavd~~~G~lyv~d~~~--------~~V~~~d~~~g~~~~~~~~~~-~~~---~~~~ia~ 280 (433)
T 4hw6_A 220 ERL-SLC---NARGAK---TCAVHPQNGKIYYTRYHH--------AMISSYDPATGTLTEEEVMMD-TKG---SNFHIVW 280 (433)
T ss_dssp CEE-EEE---ECSSBC---CCEECTTTCCEEECBTTC--------SEEEEECTTTCCEEEEEEECS-CCS---SCEEEEE
T ss_pred ccc-ccc---ccCCCC---EEEEeCCCCeEEEEECCC--------CEEEEEECCCCeEEEEEeccC-CCC---CcccEEE
Confidence 111 111 111111 3444 68999865443 5899999986665 332 222 111 1223554
Q ss_pred e-CC-eEEEEEecC
Q 016751 270 F-DG-YLCVFATIP 281 (383)
Q Consensus 270 ~-~g-~L~~v~~~~ 281 (383)
. +| .||++....
T Consensus 281 dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 281 HPTGDWAYIIYNGK 294 (433)
T ss_dssp CTTSSEEEEEETTT
T ss_pred eCCCCEEEEEeCCC
Confidence 4 34 488877543
No 204
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=50.44 E-value=1.2e+02 Score=26.01 Aligned_cols=138 Identities=15% Similarity=0.120 Sum_probs=70.5
Q ss_pred ceEEEeecCCCCceEEEEccCc-ccee--ecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 121 GVLCFCSNGSDRSLIYLWNPLI-KKYM--TLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 121 Gll~~~~~~~~~~~~~v~NP~t-~~~~--~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
|-+++... .++.+.|||..+ ++.. .+.. .......+.+.+. +++ ++.......+.+|+.+++.-....
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~~~~----~~~-l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQM--HTGPVLDVCWSDD----GSK-VFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEE--CSSCEEEEEECTT----SSE-EEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEecc--ccCCEEEEEECcC----CCE-EEEEcCCCcEEEEEcCCCCceeec
Confidence 45544443 577899999877 3332 1211 1111245556553 223 333333668999999987654433
Q ss_pred cCCCceeeeccCcccceeE----ECceEEEEEeeccCCCCCCCcEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEeCC
Q 016751 198 YGFPRSIEINRSHINSSVF----LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVFDG 272 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~v~----~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~g 272 (383)
....... ++. -+|.+...+..+ ..|..+|+.+.+- ..+..+ .. ...+.....
T Consensus 125 -~~~~~v~--------~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~-~~-----~~~~~~~~~ 181 (368)
T 3mmy_A 125 -QHDAPVK--------TIHWIKAPNYSCVMTGSWD--------KTLKFWDTRSSNPMMVLQLP-ER-----CYCADVIYP 181 (368)
T ss_dssp -ECSSCEE--------EEEEEECSSCEEEEEEETT--------SEEEEECSSCSSCSEEEECS-SC-----EEEEEEETT
T ss_pred -cccCceE--------EEEEEeCCCCCEEEEccCC--------CcEEEEECCCCcEEEEEecC-CC-----ceEEEecCC
Confidence 2111111 222 245544444433 5899999876643 333444 21 223333344
Q ss_pred eEEEEEecCCCCccEEEEEEecc
Q 016751 273 YLCVFATIPNNTFRSYELWVMKE 295 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~ 295 (383)
.+ ++...+ ..+.+|.++.
T Consensus 182 ~~-~~~~~~----~~i~~~~~~~ 199 (368)
T 3mmy_A 182 MA-VVATAE----RGLIVYQLEN 199 (368)
T ss_dssp EE-EEEEGG----GCEEEEECSS
T ss_pred ee-EEEeCC----CcEEEEEecc
Confidence 44 333333 4788998875
No 205
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=49.82 E-value=1.4e+02 Score=29.52 Aligned_cols=135 Identities=15% Similarity=0.036 Sum_probs=66.6
Q ss_pred cCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe--cCeEEEEEcCCCceeee
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV--NADAEVYSLRSNSWKNI 196 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~--~~~~~vyss~t~~W~~~ 196 (383)
.+|.|.+.+. ....+.+.++..+....+-.... ....++.+|+. .+. +++... ...+++++.....-+.+
T Consensus 463 ~~g~LY~tD~--~~~~I~v~d~dg~~~~~l~~~~~-~~P~giavDp~---~g~--ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 463 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFREQG-SKPRAIVVDPV---HGF--MYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp SSSBCEECCT--TTSCEEEEBSSSCCEEEECCCSS-CCCCCEECCSS---SSC--CEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred eCCcEEEEec--cCCeEEEEecCCCceEEEEeCCC-CCcceEEEccC---CCc--EEEcccCCCCeEEEEeCCCCCeeEE
Confidence 4566666553 45678888887765544422111 01135666664 321 111111 13455555433222222
Q ss_pred ccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCCCCCceEEEEeCC
Q 016751 197 AYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLSTDDADKYLNVFDG 272 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~g 272 (383)
. ... ..... ++.+ +|.|||..... ..|.+||+.......+ ..+ .... ....|+..++
T Consensus 535 ~-~~~----l~~Pn---Glavd~~~~~LY~aD~~~--------~~I~~~d~dG~~~~~~~~~~-~~~~--~P~glavd~~ 595 (699)
T 1n7d_A 535 V-TEN----IQWPN---GITLDLLSGRLYWVDSKL--------HSISSIDVNGGNRKTILEDE-KRLA--HPFSLAVFED 595 (699)
T ss_dssp S-CSS----CSSCC---CEEECTTTCCEEEEETTT--------TEEEEECSSSSCCEEECCCS-SSCS--SCCCCEEETT
T ss_pred E-eCC----CCCcc---EEEEeccCCEEEEEecCC--------CeEEEEccCCCceEEEEecC-CcCC--CceEeEEECC
Confidence 1 110 11122 5555 48999987554 6899999976544443 222 1111 1233556678
Q ss_pred eEEEEEec
Q 016751 273 YLCVFATI 280 (383)
Q Consensus 273 ~L~~v~~~ 280 (383)
+||++...
T Consensus 596 ~lywtd~~ 603 (699)
T 1n7d_A 596 KVFWTDII 603 (699)
T ss_dssp EEEEECST
T ss_pred EEEEEeCC
Confidence 88887743
No 206
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=49.69 E-value=1.4e+02 Score=26.68 Aligned_cols=99 Identities=9% Similarity=0.025 Sum_probs=53.2
Q ss_pred cEEEEEECCCCee-eEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-
Q 016751 237 WLIVSFDFAKEIF-QTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR- 313 (383)
Q Consensus 237 ~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~- 313 (383)
..|..+|+.+.+- ..+..| .... ....+... +|.+.+.+..+ ..+.+|-+.. ...+..+.....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~-~h~~--~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~------~~~~~~~~~~~~~ 258 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS-PRHG--AVSSICIDEECCVLILGTTR----GIIDIWDIRF------NVLIRSWSFGDHA 258 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC-GGGC--CEEEEEECTTSCEEEEEETT----SCEEEEETTT------TEEEEEEBCTTCE
T ss_pred CeEEEEeCCCCeeeEEEccC-CCCC--ceEEEEECCCCCEEEEEcCC----CeEEEEEcCC------ccEEEEEecCCCC
Confidence 5899999987654 333332 1111 12233333 46666655555 4899998875 133334432221
Q ss_pred eeEEEEEe----eCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 314 IWWPLGFT----ERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 314 ~~~~~~~~----~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
....+.+. .++.+++. ...++ .+.+||+++++...
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s--~~~dg-~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVG--GSSKT-FLTIWNFVKGHCQY 297 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEE--ESTTE-EEEEEETTTTEEEE
T ss_pred ceEEEEeccccCCCccEEEE--EcCCC-cEEEEEcCCCcEEE
Confidence 12222222 34556665 42445 59999999887544
No 207
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=49.67 E-value=1.2e+02 Score=25.65 Aligned_cols=36 Identities=19% Similarity=0.565 Sum_probs=23.3
Q ss_pred eEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC-eEEEEE
Q 016751 315 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD-TFKCIG 353 (383)
Q Consensus 315 ~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~-~~~~v~ 353 (383)
...+.+..+|.+++. ...++ .+..||+.++ +++.+.
T Consensus 309 v~~~~~s~~~~~l~s--~~~dg-~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSS--AGDDG-KVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEE--EETTS-CEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEE--ecCCC-cEEEEecCcCcchhhee
Confidence 444566667766665 43455 4999999985 466553
No 208
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=49.29 E-value=1.5e+02 Score=26.67 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=71.7
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNI 196 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~ 196 (383)
.+.+|-+++... .++.+.|||..+++....-.... .....+.+.+. + . .++.......+.+|+..+..- +
T Consensus 116 ~~p~~~~l~s~s--~Dg~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~---~-~-~l~sgs~D~~i~iwd~~~~~~--~ 185 (410)
T 1vyh_C 116 FHPVFSVMVSAS--EDATIKVWDYETGDFERTLKGHT-DSVQDISFDHS---G-K-LLASCSADMTIKLWDFQGFEC--I 185 (410)
T ss_dssp ECSSSSEEEEEE--SSSCEEEEETTTCCCCEEECCCS-SCEEEEEECTT---S-S-EEEEEETTSCCCEEETTSSCE--E
T ss_pred EcCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeccC-CcEEEEEEcCC---C-C-EEEEEeCCCeEEEEeCCCCce--e
Confidence 344455544443 67789999998876543211111 11245566654 2 2 333333356788888876532 2
Q ss_pred ccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEEe-CC
Q 016751 197 AYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNVF-DG 272 (383)
Q Consensus 197 ~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~-~g 272 (383)
. .+........ ++.+ +|.....+..+ ..|..+|+.+..-.. +.-. .. ....+... +|
T Consensus 186 ~-~~~~h~~~V~-----~v~~~p~~~~l~s~s~D--------~~i~~wd~~~~~~~~~~~~h-~~----~v~~~~~~~~g 246 (410)
T 1vyh_C 186 R-TMHGHDHNVS-----SVSIMPNGDHIVSASRD--------KTIKMWEVQTGYCVKTFTGH-RE----WVRMVRPNQDG 246 (410)
T ss_dssp E-CCCCCSSCEE-----EEEECSSSSEEEEEETT--------SEEEEEETTTCCEEEEEECC-SS----CEEEEEECTTS
T ss_pred E-EEcCCCCCEE-----EEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEEEEEeCC-Cc----cEEEEEECCCC
Confidence 1 1110000000 2222 45544433333 589999998765322 2211 10 11223322 35
Q ss_pred eEEEEEecCCCCccEEEEEEecc
Q 016751 273 YLCVFATIPNNTFRSYELWVMKE 295 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~ 295 (383)
.+.+.+..+ ..+.+|.+..
T Consensus 247 ~~l~s~s~D----~~v~vwd~~~ 265 (410)
T 1vyh_C 247 TLIASCSND----QTVRVWVVAT 265 (410)
T ss_dssp SEEEEEETT----SCEEEEETTT
T ss_pred CEEEEEcCC----CeEEEEECCC
Confidence 665555555 4899998764
No 209
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=48.92 E-value=1.3e+02 Score=25.86 Aligned_cols=143 Identities=9% Similarity=0.115 Sum_probs=70.9
Q ss_pred EEEEEecCeEEEEEcCCCce-eeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe
Q 016751 174 VVTISVNADAEVYSLRSNSW-KNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV 252 (383)
Q Consensus 174 Vv~~~~~~~~~vyss~t~~W-~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i 252 (383)
++.......+.+|+.+++.- +.+. ......... .+.-+|.+...+..+ ..|..+|+..+....+
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~------~~~~~~~~l~s~s~D--------~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSV------DIDKKASMIISGSRD--------KTIKVWTIKGQCLATL 144 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEE------EECTTSCEEEEEETT--------SCEEEEETTSCEEEEE
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEc-cCCCcEEEE------EEcCCCCEEEEEeCC--------CeEEEEECCCCeEEEE
Confidence 33333367899999988742 2222 111111100 111234444333332 4788889876655444
Q ss_pred CCCCCCCCCCCceEEEEe-------CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc
Q 016751 253 MMPYDLSTDDADKYLNVF-------DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK 325 (383)
Q Consensus 253 ~lP~~~~~~~~~~~l~~~-------~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~ 325 (383)
.-. .. ....+... ++.+.+... .+ ..+.+|.++.. .....+.-.......+.+..+|.
T Consensus 145 ~~h-~~----~v~~~~~~~~~~~~~~~~~l~s~~-~d---~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 145 LGH-ND----WVSQVRVVPNEKADDDSVTIISAG-ND---KMVKAWNLNQF------QIEADFIGHNSNINTLTASPDGT 209 (319)
T ss_dssp CCC-SS----CEEEEEECCC------CCEEEEEE-TT---SCEEEEETTTT------EEEEEECCCCSCEEEEEECTTSS
T ss_pred ecc-CC----cEEEEEEccCCCCCCCccEEEEEe-CC---CEEEEEECCcc------hhheeecCCCCcEEEEEEcCCCC
Confidence 221 11 11112211 222333333 33 58999988652 23333322111355566777787
Q ss_pred EEEEEEeeCCceEEEEEeCCCCeE
Q 016751 326 IFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 326 i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
.++. ...++ .+..+|+++++.
T Consensus 210 ~l~s--~~~dg-~i~iwd~~~~~~ 230 (319)
T 3frx_A 210 LIAS--AGKDG-EIMLWNLAAKKA 230 (319)
T ss_dssp EEEE--EETTC-EEEEEETTTTEE
T ss_pred EEEE--EeCCC-eEEEEECCCCcE
Confidence 7776 43455 499999998764
No 210
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=47.95 E-value=2.1e+02 Score=27.96 Aligned_cols=189 Identities=13% Similarity=0.030 Sum_probs=101.2
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCcee
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWK 194 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~ 194 (383)
....+|.|...+. ....+..+++.......+-.... ....++.+|.. ++ +++.... ...++++++....=+
T Consensus 44 ~d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~---~~--~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 44 FDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWL---GK--NLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp EETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETT---TT--EEEEEETTTTEEEEEETTSTTCE
T ss_pred EECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeC---CC--EEEEEECCCCEEEEEecCCCcEE
Confidence 3556788888774 56778888876544333322111 11257777765 33 3333332 567888888654322
Q ss_pred eec-cCCCceeeeccCcccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe
Q 016751 195 NIA-YGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF 270 (383)
Q Consensus 195 ~~~-~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~ 270 (383)
.+. ..+..+ . ++.+ +|.|||..... ...|..+++.......+- . ... ....|+..
T Consensus 116 ~l~~~~l~~P------~---~iavdp~~G~lY~tD~g~-------~~~I~r~~~dG~~~~~l~-~-~~~---~P~GlalD 174 (628)
T 4a0p_A 116 VLVWKDLDSP------R---ALALDPAEGFMYWTEWGG-------KPKIDRAAMDGSERTTLV-P-NVG---RANGLTID 174 (628)
T ss_dssp EEECSSCCCE------E---EEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEE-C-SCS---SEEEEEEE
T ss_pred EEEeCCCCCc------c---cEEEccCCCeEEEeCCCC-------CCEEEEEeCCCCceEEEE-C-CCC---CcceEEEc
Confidence 222 011111 1 4444 59999987431 258999998765544431 1 100 11234443
Q ss_pred --CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 271 --DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 271 --~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+++||++..... .|+..+-.+. .. ..... .. ..|.+++ .++.||+. . .....+..+|..|+
T Consensus 175 ~~~~~LY~aD~~~~------~I~~~d~dG~-~~-~v~~~-~l----~~P~glav~~~~ly~t--D-~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 175 YAKRRLYWTDLDTN------LIESSNMLGL-NR-EVIAD-DL----PHPFGLTQYQDYIYWT--D-WSRRSIERANKTSG 238 (628)
T ss_dssp TTTTEEEEEETTTT------EEEEEETTSC-SC-EEEEE-CC----SCEEEEEEETTEEEEE--E-TTTTEEEEEETTTC
T ss_pred cccCEEEEEECCCC------EEEEEcCCCC-ce-EEeec-cC----CCceEEEEECCEEEEe--c-CCCCEEEEEECCCC
Confidence 589999886543 4555554332 22 22111 11 2344443 34678887 5 33235999998877
Q ss_pred eE
Q 016751 348 TF 349 (383)
Q Consensus 348 ~~ 349 (383)
+-
T Consensus 239 ~~ 240 (628)
T 4a0p_A 239 QN 240 (628)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 211
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=47.31 E-value=1.2e+02 Score=29.21 Aligned_cols=30 Identities=17% Similarity=0.324 Sum_probs=22.8
Q ss_pred eeEECceEEEEEeeccCCCCCCCcEEEEEECC--CCeeeEe
Q 016751 214 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFA--KEIFQTV 252 (383)
Q Consensus 214 ~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~--~~~~~~i 252 (383)
++..+|.+|...... .+.++|.. ++.|+.-
T Consensus 64 P~v~~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~ 95 (582)
T 1flg_A 64 AIVSDGVIYVTASYS---------RLFALDAKTGKRLWTYN 95 (582)
T ss_dssp CEEETTEEEEEETTT---------EEEEEESSSCCEEEEEE
T ss_pred cEEECCEEEEEcCCC---------CEEEEECCCCcEEEEEc
Confidence 788999999876544 59999986 4467653
No 212
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=46.87 E-value=1.5e+02 Score=25.99 Aligned_cols=197 Identities=10% Similarity=0.082 Sum_probs=92.7
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
+.+|-.++... .++.+.|||..+++....-..+.. ....+.+.|. + . .++.......+.+|+...+.=....
T Consensus 73 s~d~~~l~s~s--~Dg~v~vWd~~~~~~~~~~~~~~~-~v~~~~~sp~---g-~-~lasg~~d~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 73 CKDKRRIVSSS--QDGKVIVWDSFTTNKEHAVTMPCT-WVMACAYAPS---G-C-AIACGGLDNKCSVYPLTFDKNENMA 144 (354)
T ss_dssp CTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSS-CCCEEEECTT---S-S-EEEEESTTSEEEEEECCCCTTCCSG
T ss_pred CCCCCEEEEEe--CCCeEEEEECCCCCcceEEecCCC-CEEEEEECCC---C-C-EEEEeeCCCCEEEEEEecccccccc
Confidence 44555555543 677888999877654332111111 1244556554 2 2 2333333567788877543111000
Q ss_pred cCCCceeeeccCcccce-eEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEEEE--e-CC
Q 016751 198 YGFPRSIEINRSHINSS-VFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYLNV--F-DG 272 (383)
Q Consensus 198 ~~~p~~~~~~~~~~~~~-v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~--~-~g 272 (383)
........+....... ..-+|.....+.. ...|..+|+.+.+... +.-. .. ....+.. . +|
T Consensus 145 -~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--------D~~v~lwd~~~~~~~~~~~~h-~~----~v~~~~~~~~~~g 210 (354)
T 2pbi_B 145 -AKKKSVAMHTNYLSACSFTNSDMQILTASG--------DGTCALWDVESGQLLQSFHGH-GA----DVLCLDLAPSETG 210 (354)
T ss_dssp -GGCEEEEECSSCEEEEEECSSSSEEEEEET--------TSEEEEEETTTCCEEEEEECC-SS----CEEEEEECCCSSC
T ss_pred -ccceeeeccCCcEEEEEEeCCCCEEEEEeC--------CCcEEEEeCCCCeEEEEEcCC-CC----CeEEEEEEeCCCC
Confidence 0011111111000001 1113332222222 2588899998765432 2211 10 1112222 2 35
Q ss_pred eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeE
Q 016751 273 YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTF 349 (383)
Q Consensus 273 ~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~ 349 (383)
.+.+.+..+ ..+.+|-+.. ... +..+.........+.+..+|..++. ...++ .+..||+++++.
T Consensus 211 ~~l~sgs~D----g~v~~wd~~~----~~~--~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~-~v~lwd~~~~~~ 274 (354)
T 2pbi_B 211 NTFVSGGCD----KKAMVWDMRS----GQC--VQAFETHESDVNSVRYYPSGDAFAS--GSDDA-TCRLYDLRADRE 274 (354)
T ss_dssp CEEEEEETT----SCEEEEETTT----CCE--EEEECCCSSCEEEEEECTTSSEEEE--EETTS-CEEEEETTTTEE
T ss_pred CEEEEEeCC----CeEEEEECCC----CcE--EEEecCCCCCeEEEEEeCCCCEEEE--EeCCC-eEEEEECCCCcE
Confidence 666666555 4899998875 222 2233221113555666667776666 43455 489999988753
No 213
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=44.80 E-value=1.8e+02 Score=26.25 Aligned_cols=138 Identities=13% Similarity=0.120 Sum_probs=71.8
Q ss_pred cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLS 259 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~ 259 (383)
...+.+|+..++.-...-....... . ++..+|.+...+..+ ..|..+|+.+.+.... +. ...
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~~~v-----~---~l~~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~-~~-~h~ 213 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHTGSV-----L---CLQYDERVIITGSSD--------STVRVWDVNTGEMLNT-LI-HHC 213 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCSSCE-----E---EEECCSSEEEEEETT--------SCEEEEESSSCCEEEE-EC-CCC
T ss_pred CCeEEEEeCCCCeEEEEEcCCCCcE-----E---EEEECCCEEEEEcCC--------CeEEEEECCCCcEEEE-Ec-CCC
Confidence 6688999987764322210111111 1 455577766665544 5799999987654322 11 111
Q ss_pred CCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEE
Q 016751 260 TDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGL 339 (383)
Q Consensus 260 ~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 339 (383)
....-....+.+.+.+..+ ..+.+|.++.. ........+.........+.+ ++..++. ...++ .+
T Consensus 214 ---~~v~~l~~~~~~l~s~s~d----g~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~s--~~~dg-~i 278 (435)
T 1p22_A 214 ---EAVLHLRFNNGMMVTCSKD----RSIAVWDMASP---TDITLRRVLVGHRAAVNVVDF--DDKYIVS--ASGDR-TI 278 (435)
T ss_dssp ---SCEEEEECCTTEEEEEETT----SCEEEEECSSS---SCCEEEEEECCCSSCEEEEEE--ETTEEEE--EETTS-EE
T ss_pred ---CcEEEEEEcCCEEEEeeCC----CcEEEEeCCCC---CCceeeeEecCCCCcEEEEEe--CCCEEEE--EeCCC-eE
Confidence 1222233345555555544 48999998753 222222222221112333333 4555555 32455 49
Q ss_pred EEEeCCCCeEE
Q 016751 340 LVYNPHSDTFK 350 (383)
Q Consensus 340 ~~yd~~t~~~~ 350 (383)
.+||+++++..
T Consensus 279 ~vwd~~~~~~~ 289 (435)
T 1p22_A 279 KVWNTSTCEFV 289 (435)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCcCcEE
Confidence 99999987654
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=44.55 E-value=86 Score=30.56 Aligned_cols=29 Identities=7% Similarity=0.163 Sum_probs=22.1
Q ss_pred eeEECceEEEEEe-eccCCCCCCCcEEEEEEC-CC--CeeeE
Q 016751 214 SVFLNGSVHWCAR-FSCYHDNSCPWLIVSFDF-AK--EIFQT 251 (383)
Q Consensus 214 ~v~~~G~lYw~~~-~~~~~~~~~~~~il~fD~-~~--~~~~~ 251 (383)
++..+|.+|.... .. .+.++|. .+ ..|+.
T Consensus 58 P~v~~g~vyv~~~~~~---------~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 58 PLVVDGKMYIHTSFPN---------NTFALGLDDPGTILWQD 90 (599)
T ss_dssp CEEETTEEEEECSTTT---------CEEEEETTCTTSEEEEE
T ss_pred cEEECCEEEEEeCCCC---------EEEEEeCCCCCcEEEEE
Confidence 7889999998765 33 7999998 54 46655
No 215
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=44.10 E-value=2e+02 Score=26.80 Aligned_cols=181 Identities=13% Similarity=0.144 Sum_probs=88.8
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.+||..+++...++.... ...++.+.|. . . .++.......+.+|+.....-+.+. .........
T Consensus 323 ~d~~i~~w~~~~~~~~~~~~~~~--~v~~~~~s~~---g-~-~l~~~~~dg~v~~~~~~~~~~~~~~-~~~~~v~~~--- 391 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQTLTGHSS--SVWGVAFSPD---G-Q-TIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGV--- 391 (577)
T ss_dssp TTSCEEEEETTSCEEEEECCCSS--CEEEEEECTT---S-S-EEEEEETTSEEEEEETTCCEEEEEE-CCSSCEEEE---
T ss_pred CCCeEEEEeCCCCeeEEEeCCCC--CEEEEEECCC---C-C-EEEEEeCCCEEEEEcCCCCEEEEec-CCCCCeEEE---
Confidence 46678888877776665543221 1244555553 2 2 2333333557788885443333222 111111100
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYE 289 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~ 289 (383)
.+.-+|.....+... ..|..||...+....+.-. .. ....++.. +|++.+....+ ..+.
T Consensus 392 ---~~s~dg~~l~~~~~d--------~~v~~~~~~~~~~~~~~~~-~~----~v~~~~~s~d~~~l~~~~~d----~~v~ 451 (577)
T 2ymu_A 392 ---AFSPDGQTIASASDD--------KTVKLWNRNGQLLQTLTGH-SS----SVWGVAFSPDDQTIASASDD----KTVK 451 (577)
T ss_dssp ---EECTTSSCEEEEETT--------SEEEEECTTCCEEEEEECC-SS----CEEEEEECTTSSEEEEEETT----SEEE
T ss_pred ---EECCCCCEEEEEeCC--------CEEEEEeCCCCEEEEecCC-CC----CeEEEEECCCCCEEEEEcCC----CEEE
Confidence 122245443333332 4788888766555544322 11 11234433 35554544444 5899
Q ss_pred EEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 290 LWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 290 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
+|.++. ..+..+.........+++..+|.+++. ...++ .+..+|...+..+.+
T Consensus 452 ~w~~~~-------~~~~~~~~~~~~v~~~~~spd~~~las--~~~d~-~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 452 LWNRNG-------QLLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDK-TVKLWNRNGQLLQTL 504 (577)
T ss_dssp EEETTS-------CEEEEEECCSSCEEEEEECTTSCEEEE--EETTS-EEEEEETTSCEEEEE
T ss_pred EEECCC-------CEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCC-EEEEEcCCCCEEEEE
Confidence 997542 122223221112455667777777666 42455 488888765555544
No 216
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=43.65 E-value=3.1e+02 Score=28.79 Aligned_cols=72 Identities=8% Similarity=0.060 Sum_probs=41.1
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
-+.+|-++.... .++.+.|||..+++....-... ......+.+.+. .+...++.......+.+|+.+++.-.
T Consensus 665 ~s~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~---~~~~~l~sg~~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 665 FSSDDSYIATCS--ADKKVKIWDSATGKLVHTYDEH-SEQVNCCHFTNK---SNHLLLATGSNDFFLKLWDLNQKECR 736 (1249)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECC-SSCEEEEEECSS---SSCCEEEEEETTSCEEEEETTSSSEE
T ss_pred EecCCCEEEEEe--CCCeEEEEECCCCceEEEEcCC-CCcEEEEEEecC---CCceEEEEEeCCCeEEEEECCCcchh
Confidence 344554433332 5778999999987755422111 111245566554 44444444444668899999887543
No 217
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=43.34 E-value=1.5e+02 Score=25.11 Aligned_cols=187 Identities=12% Similarity=0.067 Sum_probs=86.4
Q ss_pred EccCceEEEeecCCCCceEEEEccCcccee--ecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce-
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYM--TLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW- 193 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~--~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W- 193 (383)
.+.+|-+++... .++.+.+||..++... .+.. .......+.+.|. .. ..++.......+.+|+.++..=
T Consensus 105 ~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~--h~~~v~~v~~~p~---~~-~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 105 VHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEG--HEHFVMCVAFNPK---DP-STFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp ECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECC--CCSCEEEEEECTT---CT-TEEEEEETTSEEEEEETTCSSCS
T ss_pred EcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcc--cCCcEEEEEECCC---CC-CEEEEEeCCCeEEEEECCCCCcc
Confidence 344554444443 6778889997765322 1211 1111255666664 22 2344333366889999876421
Q ss_pred -eeeccCCCceeeeccCcccceeEE----CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCCCceEE
Q 016751 194 -KNIAYGFPRSIEINRSHINSSVFL----NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDDADKYL 267 (383)
Q Consensus 194 -~~~~~~~p~~~~~~~~~~~~~v~~----~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l 267 (383)
.... ....... .+.+ +|.+...+.. ...|..+|+.+.+-.. +.-. .. ....+
T Consensus 177 ~~~~~-~~~~~v~--------~~~~~~~~~~~~l~s~s~--------D~~i~iWd~~~~~~~~~~~~h---~~--~v~~~ 234 (304)
T 2ynn_A 177 FTLTT-GQERGVN--------YVDYYPLPDKPYMITASD--------DLTIKIWDYQTKSCVATLEGH---MS--NVSFA 234 (304)
T ss_dssp EEEEC-CCTTCEE--------EEEECCSTTCCEEEEEET--------TSEEEEEETTTTEEEEEEECC---SS--CEEEE
T ss_pred ceecc-CCcCcEE--------EEEEEEcCCCCEEEEEcC--------CCeEEEEeCCCCccceeeCCC---CC--CEEEE
Confidence 1111 0000000 1111 3333333332 2589999998765422 2211 11 11223
Q ss_pred EEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCC-cE-EEEEEeeCCceEEEEEeC
Q 016751 268 NVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERG-KI-FIRGECRHGGYGLLVYNP 344 (383)
Q Consensus 268 ~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i-~~~~~~~~~~~~~~~yd~ 344 (383)
+-. ++.+.+.+..+ ..+.+|.++. +.....+.........+++..+| .. +.. . .+.. +..+++
T Consensus 235 ~~~p~~~~l~s~s~D----g~i~iWd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~as--g-~~~g-~~~~~~ 300 (304)
T 2ynn_A 235 VFHPTLPIIISGSED----GTLKIWNSST------YKVEKTLNVGLERSWCIATHPTGRKNYIAS--G-FDNG-FTVLSL 300 (304)
T ss_dssp EECSSSSEEEEEETT----SCEEEEETTT------CCEEEEECCSSSSEEEEEECTTCGGGCEEE--E-ETTE-EEEEEC
T ss_pred EECCCCCEEEEEcCC----CeEEEEECCC------CceeeeccCCCccEEEEEECCCCCceEEEE--e-cCCc-eEEEEe
Confidence 333 34544444444 5899998765 23444444322124445555544 33 333 2 3332 677766
Q ss_pred CCC
Q 016751 345 HSD 347 (383)
Q Consensus 345 ~t~ 347 (383)
..+
T Consensus 301 ~~~ 303 (304)
T 2ynn_A 301 GND 303 (304)
T ss_dssp C--
T ss_pred ccC
Confidence 654
No 218
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=43.12 E-value=1.8e+02 Score=25.76 Aligned_cols=72 Identities=19% Similarity=0.386 Sum_probs=41.6
Q ss_pred CCeEEEEEecCCC----CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 271 DGYLCVFATIPNN----TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 271 ~g~L~~v~~~~~~----~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
+++++++...... ......||+++- .....+.+++... ..-+++..+|+.++. . .+. .+.+||++|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~--p~~ia~spdg~~l~v--~-n~~-~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD--ALSMTIDQQRNLMLT--L-DGG-NVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT--CCEEEEETTTTEEEE--E-CSS-CEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC--eeEEEECCCCCEEEE--e-CCC-eEEEEECCC
Confidence 3678877651110 001235555553 1246677777654 444666777865555 4 334 599999999
Q ss_pred CeEEEE
Q 016751 347 DTFKCI 352 (383)
Q Consensus 347 ~~~~~v 352 (383)
++++.+
T Consensus 335 ~~l~~~ 340 (361)
T 2oiz_A 335 PEPKLL 340 (361)
T ss_dssp SSCEEE
T ss_pred Ccceee
Confidence 955555
No 219
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=43.08 E-value=1.7e+02 Score=25.57 Aligned_cols=199 Identities=9% Similarity=-0.030 Sum_probs=92.0
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcc
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHI 211 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~ 211 (383)
..+++++|+.+++...+...+.... .+..+.|. + . +++.......+.+++..++.=+.+. ..+.........
T Consensus 59 ~~~l~~~d~~~g~~~~lt~~~~~~~-~~~~~spd---g-~-~l~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~~- 130 (388)
T 3pe7_A 59 PWNYYLLDLNTQVATQLTEGRGDNT-FGGFLSPD---D-D-ALFYVKDGRNLMRVDLATLEENVVY-QVPAEWVGYGTW- 130 (388)
T ss_dssp SCEEEEEETTTCEEEECCCSSCBCS-SSCEECTT---S-S-EEEEEETTTEEEEEETTTCCEEEEE-ECCTTEEEEEEE-
T ss_pred CceEEEEeCCCCceEEeeeCCCCCc-cceEEcCC---C-C-EEEEEeCCCeEEEEECCCCcceeee-echhhcccccce-
Confidence 4479999999999888765443221 12234443 2 2 2333332457788888887655444 333221110000
Q ss_pred cceeEECceEEEEEeeccC--------------CCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCe-E
Q 016751 212 NSSVFLNGSVHWCARFSCY--------------HDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGY-L 274 (383)
Q Consensus 212 ~~~v~~~G~lYw~~~~~~~--------------~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~-L 274 (383)
.+.-+|........... ........|..+|+.+.+...+.-. .. ....+... +|+ |
T Consensus 131 --~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~----~~~~~~~sp~dg~~l 203 (388)
T 3pe7_A 131 --VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ----WLGHPIYRPYDDSTV 203 (388)
T ss_dssp --EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS----CEEEEEEETTEEEEE
T ss_pred --eECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc----cccccEECCCCCCEE
Confidence 11123433221110000 0011235899999998876665221 11 11223332 343 4
Q ss_pred EEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC--ceeEEEEEeeCCc-EEEEEEeeCCce--EEEEEeCCCCeE
Q 016751 275 CVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ--RIWWPLGFTERGK-IFIRGECRHGGY--GLLVYNPHSDTF 349 (383)
Q Consensus 275 ~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~~~~~~~~~~~g~-i~~~~~~~~~~~--~~~~yd~~t~~~ 349 (383)
.++..... ......||.++..+ ..... +.... .......+..+|+ |++.... .+.. .++.+|+++++.
T Consensus 204 ~~~~~~~~-~~~~~~l~~~d~~~--~~~~~---l~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 204 AFCHEGPH-DLVDARMWLINEDG--TNMRK---VKTHAEGESCTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECSCT-TTSSCSEEEEETTS--CCCEE---SCCCCTTEEEEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCE
T ss_pred EEEEecCC-CCCcceEEEEeCCC--CceEE---eeeCCCCcccccceECCCCCEEEEEecC-CCCCcceEEEEecCCCce
Confidence 44433211 11245677776432 11111 21111 0122234556674 6555111 2221 399999999987
Q ss_pred EEE
Q 016751 350 KCI 352 (383)
Q Consensus 350 ~~v 352 (383)
+.+
T Consensus 277 ~~l 279 (388)
T 3pe7_A 277 RQL 279 (388)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=41.95 E-value=5 Score=36.53 Aligned_cols=29 Identities=0% Similarity=-0.159 Sum_probs=18.8
Q ss_pred eeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeE
Q 016751 214 SVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQT 251 (383)
Q Consensus 214 ~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~ 251 (383)
++..+|.+|.....+ .+.++|..+. .|+.
T Consensus 5 P~v~~~~v~~gs~dg---------~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 5 VTLPETLLFVSTLDG---------SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ---CTTEEEEEETTS---------EEEEEETTTCCEEEEE
T ss_pred CeeeCCEEEEEcCCC---------EEEEEECCCCCEEEEe
Confidence 667788888765544 8999997654 5654
No 221
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=41.71 E-value=1.6e+02 Score=24.98 Aligned_cols=187 Identities=9% Similarity=-0.002 Sum_probs=91.5
Q ss_pred ccCceEEEeecCCCCceEEEEccCccc----eeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEc-CCCc
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKK----YMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSL-RSNS 192 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~----~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss-~t~~ 192 (383)
+.+|-+++... .++.+.|||..+++ ...+.. .......+.+.+. +.+.++.......+.+|+. .++.
T Consensus 20 s~~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~----~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 20 IPSKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDN----TDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp EGGGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEES----SSEEEEEEETTSCEEEECSSSSSS
T ss_pred cCCCCEEEEEc--CCCeEEEEEeCCCCccccceeeee--cCCceEEEEECCC----CCcEEEEEcCCCeEEEEEeccCCc
Confidence 44554433332 56788888877765 333221 1112245556553 3324444444668999999 8876
Q ss_pred eeeeccC--CCceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCC---------Cee-eEeCCCCCCC
Q 016751 193 WKNIAYG--FPRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAK---------EIF-QTVMMPYDLS 259 (383)
Q Consensus 193 W~~~~~~--~p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~---------~~~-~~i~lP~~~~ 259 (383)
-..+. . ...... ++.+ .|.....+... ..|..+|+.+ .+- ..+..+
T Consensus 92 ~~~~~-~~~~~~~v~--------~l~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---- 150 (342)
T 1yfq_A 92 FQALT-NNEANLGIC--------RICKYGDDKLIAASWD--------GLIEVIDPRNYGDGVIAVKNLNSNNTKVK---- 150 (342)
T ss_dssp EEECB-SCCCCSCEE--------EEEEETTTEEEEEETT--------SEEEEECHHHHTTBCEEEEESCSSSSSSC----
T ss_pred eEecc-ccCCCCceE--------EEEeCCCCEEEEEcCC--------CeEEEEcccccccccccccCCeeeEEeeC----
Confidence 65554 2 211111 1221 13333333332 4888898764 221 111111
Q ss_pred CCCCceEEEEeCCeEEEEEecCCCCccEEEEEEecc-CCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCce
Q 016751 260 TDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKE-YGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGY 337 (383)
Q Consensus 260 ~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~-~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~ 337 (383)
.....+....+. .++...+ ..+.+|.++. .. ..... ....... ....+.+.. ++..++. ...++
T Consensus 151 --~~v~~~~~~~~~-l~~~~~d----~~i~i~d~~~~~~--~~~~~-~~~~~~~-~i~~i~~~~~~~~~l~~--~~~dg- 216 (342)
T 1yfq_A 151 --NKIFTMDTNSSR-LIVGMNN----SQVQWFRLPLCED--DNGTI-EESGLKY-QIRDVALLPKEQEGYAC--SSIDG- 216 (342)
T ss_dssp --CCEEEEEECSSE-EEEEEST----TEEEEEESSCCTT--CCCEE-EECSCSS-CEEEEEECSGGGCEEEE--EETTS-
T ss_pred --CceEEEEecCCc-EEEEeCC----CeEEEEECCcccc--cccee-eecCCCC-ceeEEEECCCCCCEEEE--EecCC-
Confidence 122234444455 3333333 5899999875 22 11111 2222222 245556666 6666666 42455
Q ss_pred EEEEEeCCCC
Q 016751 338 GLLVYNPHSD 347 (383)
Q Consensus 338 ~~~~yd~~t~ 347 (383)
.+..+|.+++
T Consensus 217 ~i~i~~~~~~ 226 (342)
T 1yfq_A 217 RVAVEFFDDQ 226 (342)
T ss_dssp EEEEEECCTT
T ss_pred cEEEEEEcCC
Confidence 3777777654
No 222
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=41.55 E-value=1.6e+02 Score=24.99 Aligned_cols=154 Identities=6% Similarity=0.031 Sum_probs=73.2
Q ss_pred EEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeee-E
Q 016751 174 VVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-T 251 (383)
Q Consensus 174 Vv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~ 251 (383)
++.......+.+++..+++....- ..+..... ... .+.-+|. +|...... ..|..+|+.+.+.. .
T Consensus 14 ~v~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~-~~~---~~s~dg~~~~v~~~~~--------~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDTVYKSC-VMPDKFGP-GTA---MMAPDNRTAYVLNNHY--------GDIYGIDLDTCKNTFH 80 (349)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEE-ECSSCCSS-CEE---EECTTSSEEEEEETTT--------TEEEEEETTTTEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEE-ecCCCCCC-cee---EECCCCCEEEEEeCCC--------CcEEEEeCCCCcEEEE
Confidence 333333678999999887653221 12210000 000 2333565 45444322 58999999887654 3
Q ss_pred eCCCCCCCC--CCCceEEEEe-CCe-EEEEEec-------CCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEE
Q 016751 252 VMMPYDLST--DDADKYLNVF-DGY-LCVFATI-------PNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGF 320 (383)
Q Consensus 252 i~lP~~~~~--~~~~~~l~~~-~g~-L~~v~~~-------~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 320 (383)
+..+ .... ......++.. +|+ |++.... .......+.+|-++.... ..-......+. ....+++
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~---~~~~~~~ 155 (349)
T 1jmx_B 81 ANLS-SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-AKPVRTFPMPR---QVYLMRA 155 (349)
T ss_dssp EESC-CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-BCCSEEEECCS---SCCCEEE
T ss_pred EEcc-cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc-cceeeeccCCC---cccceeE
Confidence 4554 2100 0001123333 354 4444422 000014778887764211 11111122221 1333456
Q ss_pred eeCCcEEEEEEeeCCceEEEEEeCCCCeEEE
Q 016751 321 TERGKIFIRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 321 ~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
..+|++|+. .. . +..+|+++++...
T Consensus 156 s~dg~l~~~----~~-~-i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 156 ADDGSLYVA----GP-D-IYKMDVKTGKYTV 180 (349)
T ss_dssp CTTSCEEEE----SS-S-EEEECTTTCCEEE
T ss_pred CCCCcEEEc----cC-c-EEEEeCCCCceec
Confidence 677885554 23 2 8999999987654
No 223
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=39.26 E-value=48 Score=24.34 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=28.8
Q ss_pred ceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEE
Q 016751 133 SLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS 178 (383)
Q Consensus 133 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~ 178 (383)
-.++.+||.+++|.+.-... ....+.+..|.. .+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~-g~s~V~~~~d~~---~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST-GFSRVHIYHHTG---NNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC-SCEEEEEEEETT---TTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC-CceEEEEEEECC---CCEEEEEEEE
Confidence 36889999999886654211 111267888877 7889998764
No 224
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=39.03 E-value=3e+02 Score=27.21 Aligned_cols=96 Identities=17% Similarity=0.270 Sum_probs=50.3
Q ss_pred EEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEe--cCCCcee
Q 016751 238 LIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTI--EKPQRIW 315 (383)
Q Consensus 238 ~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i--~~~~~~~ 315 (383)
.+..||..+++|.. | ..........+...+|.|.+.... . +..++.. +......... .+.....
T Consensus 83 Gl~~yd~~~~~f~~---~-~~~~~~~i~~i~~~~g~lWigt~~------G--l~~~~~~--~~~~~~~~~~~~~l~~~~i 148 (758)
T 3ott_A 83 GILVYNYRADRYEQ---P-ETDFPTDVRTMALQGDTLWLGALN------G--LYTYQLQ--SRKLTSFDTRRNGLPNNTI 148 (758)
T ss_dssp EEEEEETTTTEECC---C-SCCCCSCEEEEEEETTEEEEEETT------E--EEEEETT--TCCEEEECHHHHCCSCSCE
T ss_pred CeEEEeCCCCEEEC---c-ccCCCceEEEEEecCCcEEEEcCC------c--ceeEeCC--CCeEEEeccCCCCcCCCeE
Confidence 78999999998875 2 111111112344456777765421 1 3333321 1333332111 0111023
Q ss_pred EEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 316 WPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 316 ~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
..+....+|.|++. . ..+ ++.||+++++++.+
T Consensus 149 ~~i~~d~~g~lWig--t-~~G--l~~~~~~~~~~~~~ 180 (758)
T 3ott_A 149 YSIIRTKDNQIYVG--T-YNG--LCRYIPSNGKFEGI 180 (758)
T ss_dssp EEEEECTTCCEEEE--E-TTE--EEEEETTTTEEEEE
T ss_pred EEEEEcCCCCEEEE--e-CCC--HhhCccCCCceEEe
Confidence 33444557788887 5 443 89999998887654
No 225
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=38.10 E-value=1.8e+02 Score=24.49 Aligned_cols=147 Identities=12% Similarity=0.044 Sum_probs=69.4
Q ss_pred cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECc-eEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeCCCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNG-SVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVMMPYD 257 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G-~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~ 257 (383)
...+.+++..+++-...- ..+......... .+.-+| .+|...... ..|..+|+.+.+.. .+..+ .
T Consensus 10 ~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~---~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~~~~~~~~~-~ 76 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVI-TIADAGPTPMVP---MVAPGGRIAYATVNKS--------ESLVKIDLVTGETLGRIDLS-T 76 (337)
T ss_dssp TTEEEEEETTTTEEEEEE-ECTTCTTCCCCE---EECTTSSEEEEEETTT--------TEEEEEETTTCCEEEEEECC-B
T ss_pred CCeEEEEECCCCcEEEEE-EcCCCCCCccce---EEcCCCCEEEEEeCCC--------CeEEEEECCCCCeEeeEEcC-C
Confidence 567888998876443211 111100000000 233366 455544332 58999999876653 34544 2
Q ss_pred CCC-CCCceEEEEe-CC-eEEEEEec-----CCC--CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEE
Q 016751 258 LST-DDADKYLNVF-DG-YLCVFATI-----PNN--TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIF 327 (383)
Q Consensus 258 ~~~-~~~~~~l~~~-~g-~L~~v~~~-----~~~--~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~ 327 (383)
... ......++.. +| .|++.... ... ....+.+|-++. . ..+..+.... ....+.+..+|+.+
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~----~--~~~~~~~~~~-~~~~~~~s~dg~~l 149 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET----L--SRRKAFEAPR-QITMLAWARDGSKL 149 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT----T--EEEEEEECCS-SCCCEEECTTSSCE
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC----C--cEEEEEeCCC-CcceeEECCCCCEE
Confidence 000 0001123333 34 55555421 000 014677776643 2 2223333321 12334566677644
Q ss_pred EEEEeeCCceEEEEEeCCCCeEEE
Q 016751 328 IRGECRHGGYGLLVYNPHSDTFKC 351 (383)
Q Consensus 328 ~~~~~~~~~~~~~~yd~~t~~~~~ 351 (383)
+. . . + .+..+|+++++...
T Consensus 150 ~~--~-~-~-~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 150 YG--L-G-R-DLHVMDPEAGTLVE 168 (337)
T ss_dssp EE--E-S-S-SEEEEETTTTEEEE
T ss_pred EE--e-C-C-eEEEEECCCCcEee
Confidence 44 3 3 3 39999999987653
No 226
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=37.89 E-value=2.9e+02 Score=26.85 Aligned_cols=179 Identities=8% Similarity=-0.030 Sum_probs=90.6
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
...+...+..+++...+-+........++.+|+. .+ +|++... ...+..++......+.+. .... ....
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~---~~--~lywtD~~~~~I~r~~~~g~~~~~v~-~~g~----~~P~ 83 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVT---DN--RIYWTDISLKTISRAFMNGSALEHVV-EFGL----DYPE 83 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT---TT--EEEEEETTTTEEEEEETTSCSCEEEE-CSSC----SCCC
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECC---CC--EEEEEECCCCeEEEEECCCCCcEEEE-eCCC----CCcc
Confidence 3455555655544333222222223378888876 43 3433332 456666776655555443 2111 1111
Q ss_pred ccceeEE---CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCc
Q 016751 211 INSSVFL---NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTF 285 (383)
Q Consensus 211 ~~~~v~~---~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~ 285 (383)
++.+ +|.|||..... ..|.++|+....-..+.-. ... ....+++. +|.||+..-..
T Consensus 84 ---GlAvD~~~~~LY~tD~~~--------~~I~v~~~dG~~~~~l~~~--~l~--~P~~iavdp~~G~lY~tD~g~---- 144 (628)
T 4a0p_A 84 ---GMAVDWLGKNLYWADTGT--------NRIEVSKLDGQHRQVLVWK--DLD--SPRALALDPAEGFMYWTEWGG---- 144 (628)
T ss_dssp ---EEEEETTTTEEEEEETTT--------TEEEEEETTSTTCEEEECS--SCC--CEEEEEEETTTTEEEEEECSS----
T ss_pred ---eEEEEeCCCEEEEEECCC--------CEEEEEecCCCcEEEEEeC--CCC--CcccEEEccCCCeEEEeCCCC----
Confidence 5555 58999976544 6899999976543333111 111 12345554 68888876432
Q ss_pred cEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEE--ee-CCcEEEEEEeeCCceEEEEEeCCCCeEE
Q 016751 286 RSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGF--TE-RGKIFIRGECRHGGYGLLVYNPHSDTFK 350 (383)
Q Consensus 286 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~--~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~ 350 (383)
.-.|++..-++. . -..+. . . ...|.++ .. ++.||+. ..... .+..+|+.....+
T Consensus 145 -~~~I~r~~~dG~-~-~~~l~--~--~-~~~P~GlalD~~~~~LY~a--D~~~~-~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 145 -KPKIDRAAMDGS-E-RTTLV--P--N-VGRANGLTIDYAKRRLYWT--DLDTN-LIESSNMLGLNRE 201 (628)
T ss_dssp -SCEEEEEETTSC-S-CEEEE--C--S-CSSEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCE
T ss_pred -CCEEEEEeCCCC-c-eEEEE--C--C-CCCcceEEEccccCEEEEE--ECCCC-EEEEEcCCCCceE
Confidence 235555554332 1 11111 1 1 2344444 33 4578877 42233 5888888765443
No 227
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=37.82 E-value=59 Score=24.21 Aligned_cols=40 Identities=8% Similarity=0.328 Sum_probs=28.4
Q ss_pred ceEEEEccCcc-ceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEE
Q 016751 133 SLIYLWNPLIK-KYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS 178 (383)
Q Consensus 133 ~~~~v~NP~t~-~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~ 178 (383)
-+++.+||.|+ +|++.-... ..+.+.+|+. .+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~---~~V~~~~d~~---~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA---VTVSYFYDST---RNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC---EEEEEEEETT---TTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc---eEEEEEEcCC---CCEEEEEEcc
Confidence 36899999996 997654322 2255777877 7789998754
No 228
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=36.64 E-value=2.3e+02 Score=25.32 Aligned_cols=199 Identities=12% Similarity=0.163 Sum_probs=98.1
Q ss_pred CceEEEeecC----------CCCceEEEEccCc--cceeecCCCC--CC-CCc--eeEEEeccCCCCCCeEEEEEEe---
Q 016751 120 NGVLCFCSNG----------SDRSLIYLWNPLI--KKYMTLPRPS--LN-PRY--LGFGVNSVSGHLDDFKVVTISV--- 179 (383)
Q Consensus 120 ~Gll~~~~~~----------~~~~~~~v~NP~t--~~~~~LP~~~--~~-~~~--~~~g~d~~~~~~~~ykVv~~~~--- 179 (383)
+|++.+..+. ...+.++++||.+ .+...|.-.. .. ..+ .|+.+.+.. .+.-+++.+..
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~--dg~~~L~Vvnh~~~ 137 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD--DNTVYLLVVNHPGS 137 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT--TCCEEEEEEECSTT
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC--CCcEEEEEEECCCC
Confidence 6777666410 1467899999983 3444443222 11 112 666665420 34556666654
Q ss_pred cCeEEEEEcCC--CceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCC----------CCCCcEEEEEECCCC
Q 016751 180 NADAEVYSLRS--NSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHD----------NSCPWLIVSFDFAKE 247 (383)
Q Consensus 180 ~~~~~vyss~t--~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~----------~~~~~~il~fD~~~~ 247 (383)
...+|+|.... +....+. +...... ...+...+.-+|.+|.-.... ..+ ......++.||..
T Consensus 138 ~s~ielf~~d~~~~~~~~~~-~~~g~~~--~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~~~~~~g~vyr~d~~-- 211 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLK-TIRHKLL--PSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMHLGLAWSFVTYYSPN-- 211 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEE-EECCTTC--SSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHHTTCCCEEEEEECTT--
T ss_pred CCeEEEEEEECCCCEEEEEe-ccccCCC--CCCceEEEeCCCCEEecCCcE-eCCcccccchhhccCCccEEEEEECC--
Confidence 56788877754 4444443 2221111 111112456678877654321 000 1234689999985
Q ss_pred eeeEe----CCCCCCCCCCCceEEEEe-CC-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe
Q 016751 248 IFQTV----MMPYDLSTDDADKYLNVF-DG-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT 321 (383)
Q Consensus 248 ~~~~i----~lP~~~~~~~~~~~l~~~-~g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~ 321 (383)
+.+.+ ..| .-++-. +| .||++..... .+..+.++.. ........+.... ...-+.+.
T Consensus 212 ~~~~~~~~l~~p---------NGia~spDg~~lYvadt~~~----~I~~~~~~~~---g~l~~~~~~~~~g-~PDGi~vD 274 (355)
T 3sre_A 212 DVRVVAEGFDFA---------NGINISPDGKYVYIAELLAH----KIHVYEKHAN---WTLTPLRVLSFDT-LVDNISVD 274 (355)
T ss_dssp CCEEEEEEESSE---------EEEEECTTSSEEEEEEGGGT----EEEEEEECTT---SCEEEEEEEECSS-EEEEEEEC
T ss_pred eEEEeecCCccc---------CcceECCCCCEEEEEeCCCC----eEEEEEECCC---CcEecCEEEeCCC-CCceEEEe
Confidence 23322 333 223443 34 6777776553 5544444432 3344444443322 23334555
Q ss_pred e-CCcEEEEEEeeCCceEEEEEeCC
Q 016751 322 E-RGKIFIRGECRHGGYGLLVYNPH 345 (383)
Q Consensus 322 ~-~g~i~~~~~~~~~~~~~~~yd~~ 345 (383)
. +|.+++. ...++..++.||++
T Consensus 275 ~e~G~lwva--~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 275 PVTGDLWVG--CHPNGMRIFFYDAE 297 (355)
T ss_dssp TTTCCEEEE--EESCHHHHHSCCTT
T ss_pred CCCCcEEEE--ecCCceEEEEECCC
Confidence 6 4899995 42232237777776
No 229
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=36.60 E-value=39 Score=24.95 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=28.1
Q ss_pred eEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEE
Q 016751 134 LIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS 178 (383)
Q Consensus 134 ~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~ 178 (383)
+++.+||.+++|.+.-........+.+..|.. .+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~---~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPT---ANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCCBSSCSCCCCEEEEEEEETT---TTEEEEEEEE
T ss_pred EEEEEcCCCCceeECCCCCCCccEEEEEEeCC---CCEEEEEEEE
Confidence 67889999999864432111111266788877 8889988754
No 230
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=35.90 E-value=2.1e+02 Score=24.46 Aligned_cols=200 Identities=10% Similarity=0.051 Sum_probs=93.3
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEec-----CeEEEEEcCCC
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVN-----ADAEVYSLRSN 191 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~-----~~~~vyss~t~ 191 (383)
-+.+|-.++... .++.+.+||..+++....-... .....+.+.+. +.+-++. ... ..+.+|+..++
T Consensus 82 ~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~----~~~l~~~-~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 82 VDCFTKYCVTGS--ADYSIKLWDVSNGQCVATWKSP--VPVKRVEFSPC----GNYFLAI-LDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECS--SCEEEEEECTT----SSEEEEE-ECCBTTBCCEEEEEEEEEC
T ss_pred EcCCCCEEEEEe--CCCeEEEEECCCCcEEEEeecC--CCeEEEEEccC----CCEEEEe-cCCccCCCCEEEEEEecCC
Confidence 344554444432 5778999998887655433211 12245556553 2233322 222 67888887654
Q ss_pred c----eeeeccCCCceee-ecc---CcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCC-Cee-eEeCCCCCCCCC
Q 016751 192 S----WKNIAYGFPRSIE-INR---SHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAK-EIF-QTVMMPYDLSTD 261 (383)
Q Consensus 192 ~----W~~~~~~~p~~~~-~~~---~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~-~~~-~~i~lP~~~~~~ 261 (383)
. +.... ..+.... ... ........-+|.....+... ..|..||+.+ ... ..+... ..
T Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~-~~--- 219 (369)
T 3zwl_B 153 SATHELTKVS-EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD--------GKISKYDVSNNYEYVDSIDLH-EK--- 219 (369)
T ss_dssp TTTCCEEEEC-SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT--------SEEEEEETTTTTEEEEEEECC-SS---
T ss_pred ccceeecccc-cceeeeccCCcCccceeEEEEcCCCCEEEEEcCC--------CEEEEEECCCCcEeEEEEecC-CC---
Confidence 2 22222 1111110 000 00000122345544444433 5899999987 332 333322 11
Q ss_pred CCceEEEEe-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc----
Q 016751 262 DADKYLNVF-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG---- 336 (383)
Q Consensus 262 ~~~~~l~~~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~---- 336 (383)
....+.-. +|.+.++...+ ..+.+|.++.. .....+.... ....+.+..++..++.+.. .+.
T Consensus 220 -~v~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~------~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~~~~~~~ 286 (369)
T 3zwl_B 220 -SISDMQFSPDLTYFITSSRD----TNSFLVDVSTL------QVLKKYETDC-PLNTAVITPLKEFIILGGG-QEAKDVT 286 (369)
T ss_dssp -CEEEEEECTTSSEEEEEETT----SEEEEEETTTC------CEEEEEECSS-CEEEEEECSSSSEEEEEEC-CC-----
T ss_pred -ceeEEEECCCCCEEEEecCC----ceEEEEECCCC------ceeeeecCCC-CceeEEecCCCceEEEeec-CCCceEE
Confidence 11223333 45555555544 48999988652 1222222222 2344455555555554211 110
Q ss_pred -------e-EEEEEeCCCCeEEE
Q 016751 337 -------Y-GLLVYNPHSDTFKC 351 (383)
Q Consensus 337 -------~-~~~~yd~~t~~~~~ 351 (383)
. .+..||.++++...
T Consensus 287 ~~~~~~~~~~i~~~d~~~~~~~~ 309 (369)
T 3zwl_B 287 TTSANEGKFEARFYHKIFEEEIG 309 (369)
T ss_dssp --------CEEEEEETTTCCEEE
T ss_pred EEecCCCcceeEEEecCCCcchh
Confidence 0 48888888876543
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=35.68 E-value=1.9e+02 Score=23.94 Aligned_cols=159 Identities=11% Similarity=-0.014 Sum_probs=77.4
Q ss_pred eeEEEeccCCCCCCeEEEEEEe-cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEE---CceEEEEEeeccCCCC
Q 016751 158 LGFGVNSVSGHLDDFKVVTISV-NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFL---NGSVHWCARFSCYHDN 233 (383)
Q Consensus 158 ~~~g~d~~~~~~~~ykVv~~~~-~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~---~G~lYw~~~~~~~~~~ 233 (383)
.++.+|+. .+ +++.... ...+.+|+..++.-+.+. .... .... ++.+ +|.+||.....
T Consensus 39 ~gi~~d~~---~~--~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~----~~p~---~ia~d~~~~~lyv~d~~~----- 100 (267)
T 1npe_A 39 IGLAFDCV---DK--VVYWTDISEPSIGRASLHGGEPTTII-RQDL----GSPE---GIALDHLGRTIFWTDSQL----- 100 (267)
T ss_dssp EEEEEETT---TT--EEEEEETTTTEEEEEESSSCCCEEEE-CTTC----CCEE---EEEEETTTTEEEEEETTT-----
T ss_pred EEEEEecC---CC--EEEEEECCCCEEEEEecCCCCcEEEE-ECCC----CCcc---EEEEEecCCeEEEEECCC-----
Confidence 45666664 32 2332222 457788887665322222 1110 0111 3443 58999977654
Q ss_pred CCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCC
Q 016751 234 SCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKP 311 (383)
Q Consensus 234 ~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 311 (383)
..|..+|+....-..+ .+ .... ....++.. +|+|++...... ... |+++.-.+... .........
T Consensus 101 ---~~I~~~~~~g~~~~~~-~~-~~~~--~P~~i~vd~~~g~lyv~~~~~~--~~~--I~~~~~dg~~~--~~~~~~~~~ 167 (267)
T 1npe_A 101 ---DRIEVAKMDGTQRRVL-FD-TGLV--NPRGIVTDPVRGNLYWTDWNRD--NPK--IETSHMDGTNR--RILAQDNLG 167 (267)
T ss_dssp ---TEEEEEETTSCSCEEE-EC-SSCS--SEEEEEEETTTTEEEEEECCSS--SCE--EEEEETTSCCC--EEEECTTCS
T ss_pred ---CEEEEEEcCCCCEEEE-EE-CCCC--CccEEEEeeCCCEEEEEECCCC--CcE--EEEEecCCCCc--EEEEECCCC
Confidence 5899999875543333 12 1111 12334444 578888875421 123 44443222111 111111111
Q ss_pred CceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 312 QRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 312 ~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
...-+++.. ++.||+. ..... .+..+|+.+...+.+
T Consensus 168 --~P~gia~d~~~~~lyv~--d~~~~-~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 168 --LPNGLTFDAFSSQLCWV--DAGTH-RAECLNPAQPGRRKV 204 (267)
T ss_dssp --CEEEEEEETTTTEEEEE--ETTTT-EEEEEETTEEEEEEE
T ss_pred --CCcEEEEcCCCCEEEEE--ECCCC-EEEEEecCCCceEEE
Confidence 233345554 3578887 52233 599999987655443
No 232
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=34.75 E-value=11 Score=28.57 Aligned_cols=21 Identities=5% Similarity=0.175 Sum_probs=11.8
Q ss_pred EEEEEeCCCCeEEEEEEecCc
Q 016751 338 GLLVYNPHSDTFKCIGVHLPY 358 (383)
Q Consensus 338 ~~~~yd~~t~~~~~v~~~~~~ 358 (383)
.++.||..+++|++.+++|..
T Consensus 34 ~vY~f~~~~~~W~K~~iEGtL 54 (127)
T 2qkl_A 34 AVYQFDVGSQKWLKTSIEGTF 54 (127)
T ss_dssp EEECC------CCEEEEEEEE
T ss_pred EEEEecCCCCceEEcCcEEEE
Confidence 477778889999999998863
No 233
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=34.60 E-value=2.5e+02 Score=25.00 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=50.9
Q ss_pred cEEEEEECCC--CeeeEeCCCCCCCCCC--CceEEEEeC-C-eEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC
Q 016751 237 WLIVSFDFAK--EIFQTVMMPYDLSTDD--ADKYLNVFD-G-YLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK 310 (383)
Q Consensus 237 ~~il~fD~~~--~~~~~i~lP~~~~~~~--~~~~l~~~~-g-~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 310 (383)
..|..+|+.+ ..+..+.+........ ....+.-.. | .+.+....+ ..+.+|.+........-.. .+..
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~--~~~~ 271 (447)
T 3dw8_B 198 LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK----GTIRLCDMRASALCDRHSK--LFEE 271 (447)
T ss_dssp SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT----SCEEEEETTTCSSSCTTCE--EECC
T ss_pred CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC----CeEEEEECcCCccccceee--Eecc
Confidence 5899999983 2334332220111111 122333333 4 566666555 4899999875321000011 2221
Q ss_pred CCc------------eeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 311 PQR------------IWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 311 ~~~------------~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
... ....+.+..+|..++. . ..+ .+.+||+++
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~-~~~-~v~iwd~~~ 315 (447)
T 3dw8_B 272 PEDPSNRSFFSEIISSISDVKFSHSGRYMMT--R-DYL-SVKVWDLNM 315 (447)
T ss_dssp C-----CCHHHHHTTCEEEEEECTTSSEEEE--E-ESS-EEEEEETTC
T ss_pred CCCccccccccccCceEEEEEECCCCCEEEE--e-eCC-eEEEEeCCC
Confidence 110 2445666677877776 5 335 599999986
No 234
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=34.42 E-value=20 Score=21.49 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=13.2
Q ss_pred CCCCCHHHHHHHHhcCC
Q 016751 23 SFRLPEDVMIDIFLRLE 39 (383)
Q Consensus 23 ~~~Lp~Dll~eIL~rLP 39 (383)
...||.|+.+|||+--.
T Consensus 21 F~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKS 37 (48)
T ss_dssp TTTSCHHHHHHHTTCCC
T ss_pred HHHCcHHHHHHHHhcch
Confidence 45799999999987544
No 235
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=34.35 E-value=3.5e+02 Score=26.63 Aligned_cols=156 Identities=12% Similarity=0.023 Sum_probs=84.2
Q ss_pred CCeEEEEEEe----cCeEEEEEcCCC--c-eeeeccCCCceeeeccCcccceeE-ECceEEEEEeeccCCCCCCCcEEEE
Q 016751 170 DDFKVVTISV----NADAEVYSLRSN--S-WKNIAYGFPRSIEINRSHINSSVF-LNGSVHWCARFSCYHDNSCPWLIVS 241 (383)
Q Consensus 170 ~~ykVv~~~~----~~~~~vyss~t~--~-W~~~~~~~p~~~~~~~~~~~~~v~-~~G~lYw~~~~~~~~~~~~~~~il~ 241 (383)
+.|-++.... ...+.+++..++ . |+.+. ........ .+. -++.+|+..... .....|..
T Consensus 279 G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~-------~~~~dg~~l~~~s~~~-----~~~~~l~~ 345 (741)
T 1yr2_A 279 GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWD-------FVDGVGDQLWFVSGDG-----APLKKIVR 345 (741)
T ss_dssp SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEE-------EEEEETTEEEEEECTT-----CTTCEEEE
T ss_pred CCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCceEE-------EEeccCCEEEEEECCC-----CCCCEEEE
Confidence 4455554432 347778888776 6 87776 22111110 222 345677765432 23468999
Q ss_pred EECCC--CeeeEeCCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCc-eeEEE
Q 016751 242 FDFAK--EIFQTVMMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQR-IWWPL 318 (383)
Q Consensus 242 fD~~~--~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~~ 318 (383)
.|+.+ +.|..+- | .... ....+...+++|++....++ ..+||+++-.+ . ....+..... ....+
T Consensus 346 ~d~~~~~~~~~~l~-~-~~~~--~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g---~--~~~~l~~~~~~~v~~~ 412 (741)
T 1yr2_A 346 VDLSGSTPRFDTVV-P-ESKD--NLESVGIAGNRLFASYIHDA----KSQVLAFDLDG---K--PAGAVSLPGIGSASGL 412 (741)
T ss_dssp EECSSSSCEEEEEE-C-CCSS--EEEEEEEEBTEEEEEEEETT----EEEEEEEETTS---C--EEEECBCSSSCEEEEE
T ss_pred EeCCCCccccEEEe-c-CCCC--eEEEEEEECCEEEEEEEECC----EEEEEEEeCCC---C--ceeeccCCCCeEEEEe
Confidence 99987 5787763 3 2211 11223445788877776654 77888887422 1 3344544211 22323
Q ss_pred EEeeCC-cEEEEEEeeCCc-eEEEEEeCCCCeEEEE
Q 016751 319 GFTERG-KIFIRGECRHGG-YGLLVYNPHSDTFKCI 352 (383)
Q Consensus 319 ~~~~~g-~i~~~~~~~~~~-~~~~~yd~~t~~~~~v 352 (383)
....++ .+++.-.. ... ..++.||+.+++.+.+
T Consensus 413 ~~s~d~~~l~~~~ss-~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 413 SGRPGDRHAYLSFSS-FTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ECCBTCSCEEEEEEE-TTEEEEEEEEETTTTEEEEC
T ss_pred ecCCCCCEEEEEEcC-CCCCCEEEEEECCCCcEEEE
Confidence 333444 46655112 111 2699999999886554
No 236
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=33.85 E-value=44 Score=25.47 Aligned_cols=21 Identities=10% Similarity=0.322 Sum_probs=17.9
Q ss_pred EEEEEeCCCCeEEEEEEecCc
Q 016751 338 GLLVYNPHSDTFKCIGVHLPY 358 (383)
Q Consensus 338 ~~~~yd~~t~~~~~v~~~~~~ 358 (383)
.++.||..+++|++.+++|..
T Consensus 39 ~vY~f~~~~~~W~K~~iEG~L 59 (134)
T 2lyd_A 39 AFYTFNSSQNEWEKTDVEGAF 59 (134)
T ss_dssp EEEEEETTTTEEEEEEEEEEE
T ss_pred EEEEecCCcCceeEcCCcceE
Confidence 488889999999999988763
No 237
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.26 E-value=2.5e+02 Score=24.68 Aligned_cols=182 Identities=13% Similarity=0.112 Sum_probs=93.1
Q ss_pred CCceEEEEccCccceeecCCCC--CCC--CceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC--ceeeeccCCCcee
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPS--LNP--RYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN--SWKNIAYGFPRSI 204 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~--~~~--~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~--~W~~~~~~~p~~~ 204 (383)
.++.+.+||..+++....-... ... ....+.+.+. ..+ .++.......+.+|+.+.. .-+... ......
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~-~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v 252 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL---NAN-MFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDI 252 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS---SCC-EEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCC
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC---CCC-EEEEEECCCeEEEEECCCCCcceEEEC-CcCCCe
Confidence 5778999999988766532211 111 1245555543 222 3333333668899998642 112221 111000
Q ss_pred eeccCcccceeE--ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeE-eCCCCCCCCCC---CceEEEEe-CCeEEEE
Q 016751 205 EINRSHINSSVF--LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQT-VMMPYDLSTDD---ADKYLNVF-DGYLCVF 277 (383)
Q Consensus 205 ~~~~~~~~~~v~--~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~---~~~~l~~~-~g~L~~v 277 (383)
. ++. -+|.....+..+ ..|..+|+.+..-.. +... ...... ....++-. +|++.++
T Consensus 253 -----~---~v~~~p~~~~l~s~s~D--------~~i~lwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 253 -----N---SVKFFPDGQRFGTGSDD--------GTCRLFDMRTGHQLQVYNRE-PDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp -----C---EEEECTTSSEEEEECSS--------SCEEEEETTTTEEEEEECCC-CSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred -----E---EEEEecCCCeEEEEcCC--------CeEEEEECCCCcEEEEeccc-ccccccccCceEEEEECCCCCEEEE
Confidence 0 222 245554444433 578999998765433 3322 111111 12233333 4676666
Q ss_pred EecCCCCccEEEEEEeccCCCCCCeEEEEEec---CC-CceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 278 ATIPNNTFRSYELWVMKEYGLTESWTKLYTIE---KP-QRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 278 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~---~~-~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
+..+ ..+.+|-+... .....+. .. ......+++..+|..++. ...++ .+..+|+.+.
T Consensus 316 g~~d----g~i~vwd~~~~------~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s--gs~D~-~i~iW~~~~~ 376 (380)
T 3iz6_a 316 GYSN----GDCYVWDTLLA------EMVLNLGTLQNSHEGRISCLGLSSDGSALCT--GSWDK-NLKIWAFSGH 376 (380)
T ss_dssp ECTT----SCEEEEETTTC------CEEEEECCSCSSCCCCCCEEEECSSSSEEEE--ECTTS-CEEEEECCSS
T ss_pred EECC----CCEEEEECCCC------ceEEEEecccCCCCCceEEEEECCCCCEEEE--eeCCC-CEEEEecCCC
Confidence 6554 48999987541 1222221 11 113455677778877777 43455 4888888765
No 238
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=32.85 E-value=2.4e+02 Score=24.30 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=19.1
Q ss_pred eEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 315 WWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 315 ~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
...+++..+|..++. ...++ .+..||.+++
T Consensus 312 v~~~~~sp~g~~l~s--g~~Dg-~v~~w~~~~g 341 (343)
T 2xzm_R 312 CTSLAWNALGKKLFA--GFTDG-VIRTFSFETS 341 (343)
T ss_dssp EEEEEECSSSCCEEE--EETTS-EEEEEEEEEE
T ss_pred eEEEEECCCCCeEEE--ecCCc-eEEEEEEEcc
Confidence 445666677766666 42455 4888887654
No 239
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=32.48 E-value=2.6e+02 Score=24.68 Aligned_cols=135 Identities=12% Similarity=0.141 Sum_probs=67.4
Q ss_pred cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDL 258 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~ 258 (383)
...+.+|+.+++.-...-.......... ...-+|.....+..+ ..|..+|+.+...... ... ..
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~------~~~p~~~~l~s~s~d--------~~v~iwd~~~~~~~~~~~~~-~~ 208 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSL------DYFPSGDKLVSGSGD--------RTVRIWDLRTGQCSLTLSIE-DG 208 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEE------EECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECS-SC
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEE------EEcCCCCEEEEecCC--------CcEEEEECCCCeeEEEEEcC-CC
Confidence 6688999988765422210111111100 111245443333332 5899999988765432 222 11
Q ss_pred CCCCCceEEEEe--CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecC-------CCceeEEEEEeeCCcEEEE
Q 016751 259 STDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEK-------PQRIWWPLGFTERGKIFIR 329 (383)
Q Consensus 259 ~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-------~~~~~~~~~~~~~g~i~~~ 329 (383)
...+... +|++.+.+..+ ..+.+|.++.. . .+..+.. .......+.+..+|..++.
T Consensus 209 -----v~~~~~~~~~~~~l~~~s~d----~~v~iwd~~~~----~--~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 209 -----VTTVAVSPGDGKYIAAGSLD----RAVRVWDSETG----F--LVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp -----EEEEEECSTTCCEEEEEETT----SCEEEEETTTC----C--EEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred -----cEEEEEECCCCCEEEEEcCC----CcEEEEECCCC----c--EEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 1233333 46666666655 48999987641 1 1122211 0003445666677777766
Q ss_pred EEeeCCceEEEEEeCCCC
Q 016751 330 GECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 330 ~~~~~~~~~~~~yd~~t~ 347 (383)
...++ .+..||+++.
T Consensus 274 --~s~d~-~v~~wd~~~~ 288 (393)
T 1erj_A 274 --GSLDR-SVKLWNLQNA 288 (393)
T ss_dssp --EETTS-EEEEEEC---
T ss_pred --EeCCC-EEEEEECCCC
Confidence 43455 4899998764
No 240
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=32.38 E-value=3.5e+02 Score=26.10 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=42.7
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC----
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS---- 190 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t---- 190 (383)
+.-|-++.+++.. ...++++|..+++...+....... ....+.|. +++ ++.. ....+.+++..+
T Consensus 87 ~~~spd~~~~~~~----~~~i~~~d~~~~~~~~l~~~~~~~--~~~~~Spd----G~~-la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 87 TLDAGRGLVVLFT----QGGLVGFDMLARKVTYLFDTNEET--ASLDFSPV----GDR-VAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp EEETTTTEEEEEE----TTEEEEEETTTTEEEEEECCTTCC--TTCEECTT----SSE-EEEE-ETTEEEEEECBCTTSC
T ss_pred EEECCCCeEEEEE----CCEEEEEECCCCceEEccCCcccc--cCCcCCCC----CCE-EEEE-ECCeEEEEecCccccc
Confidence 3345557777665 478999999998877765433221 22334443 223 2222 357889999988
Q ss_pred -Cceeeec
Q 016751 191 -NSWKNIA 197 (383)
Q Consensus 191 -~~W~~~~ 197 (383)
+.-+.+.
T Consensus 155 ~g~~~~~~ 162 (706)
T 2z3z_A 155 MSRAIAVT 162 (706)
T ss_dssp CCCCEESC
T ss_pred CCCcEEec
Confidence 7665443
No 241
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=31.83 E-value=2.3e+02 Score=24.57 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=34.8
Q ss_pred eeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCe-eeEeCCCCCCCCC--CCceEEEEe--CCeEEEEEe
Q 016751 214 SVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEI-FQTVMMPYDLSTD--DADKYLNVF--DGYLCVFAT 279 (383)
Q Consensus 214 ~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~--~~~~~l~~~--~g~L~~v~~ 279 (383)
++.+ +|.|||+.... .......|+.||+.+.+ ...+.+| ..... .....++.. +|.+++...
T Consensus 71 gv~~d~~g~L~v~D~g~---~~~~~~~i~~~d~~tg~~~~~~~~~-~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGN---QSKSVPKLVAWDTLNNQLSRVIYLP-PPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp EEEECSSSEEEEEECHH---HHTSCCEEEEEETTTTEEEEEEECC-TTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred EEEEcCCCcEEEEcCCC---CcCCCCeEEEEECCCCeEEEEEECC-hhhcccccccceEEEecCCCEEEEEcC
Confidence 4444 48999976430 00012489999999887 4556666 33211 122345554 467777654
No 242
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=31.33 E-value=2.4e+02 Score=23.88 Aligned_cols=70 Identities=7% Similarity=-0.175 Sum_probs=39.3
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceee-cCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCcee
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMT-LPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWK 194 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~ 194 (383)
+.+|.+++... ....++++|+.+++... ++.... .....+.+++. + .+-++.......+.+|+..+++-.
T Consensus 8 ~~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~d---g-~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 8 KAGHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPD---N-RTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CTTCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTT---S-SEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCC-CCCceeEECCC---C-CEEEEEeCCCCcEEEEeCCCCcEE
Confidence 34566655543 57789999999877553 332210 01134555554 3 332232222568899999887543
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=31.20 E-value=3.6e+02 Score=26.32 Aligned_cols=117 Identities=11% Similarity=0.059 Sum_probs=60.6
Q ss_pred cCceEEEeecCCCCceEEEEccCcccee--ecCCCCCCC-----C---ceeEEEeccCCCCCCeEEEEEEecCeEEEEEc
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYM--TLPRPSLNP-----R---YLGFGVNSVSGHLDDFKVVTISVNADAEVYSL 188 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~--~LP~~~~~~-----~---~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss 188 (383)
.+|.|.+.. ....++.+|+.|++.+ .-+..+... + .-+..++. =+|+.......+..++.
T Consensus 65 ~~g~vyv~~---~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~v~~~dg~l~alD~ 134 (668)
T 1kv9_A 65 HDGVIYTSM---SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG-------DKVYVGTLDGRLIALDA 134 (668)
T ss_dssp ETTEEEEEE---GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB-------TEEEEECTTSEEEEEET
T ss_pred ECCEEEEEC---CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC-------CEEEEEcCCCEEEEEEC
Confidence 477777765 4667888899887633 222211100 0 01111111 12333222456788888
Q ss_pred CCC--ceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe
Q 016751 189 RSN--SWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV 252 (383)
Q Consensus 189 ~t~--~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i 252 (383)
.|+ .|+.-. .-+......... ++..+|.+|.-.... +......|.+||..+. .|+.-
T Consensus 135 ~tG~~~W~~~~-~~~~~~~~~~~~---P~v~~~~v~vg~~~~---~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 135 KTGKAIWSQQT-TDPAKPYSITGA---PRVVKGKVIIGNGGA---EYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TTCCEEEEEEC-SCTTSSCBCCSC---CEEETTEEEECCBCT---TTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEeeeecc-CCCCCcceecCC---CEEECCEEEEeCCCC---CcCCCCEEEEEECCCCcEEEEec
Confidence 776 588654 211111111222 678899998754321 0112358999998754 56653
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=30.93 E-value=3.9e+02 Score=26.16 Aligned_cols=117 Identities=9% Similarity=0.032 Sum_probs=61.2
Q ss_pred cCceEEEeecCCCCceEEEEccCccceee--cCCCCCC--------CCceeEEEeccCCCCCCeEEEEEEecCeEEEEEc
Q 016751 119 CNGVLCFCSNGSDRSLIYLWNPLIKKYMT--LPRPSLN--------PRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSL 188 (383)
Q Consensus 119 ~~Gll~~~~~~~~~~~~~v~NP~t~~~~~--LP~~~~~--------~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss 188 (383)
.+|.|.+.. ....++.+|+.|++.+. -+..... ...-+..++. =+|+.......+..++.
T Consensus 76 ~~g~vyv~~---~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~v~v~~~dg~l~alD~ 145 (677)
T 1kb0_A 76 VDGIMYVSA---SWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK-------GKVYVGAWDGRLIALDA 145 (677)
T ss_dssp ETTEEEEEC---GGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET-------TEEEEECTTSEEEEEET
T ss_pred ECCEEEEEC---CCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC-------CEEEEEcCCCEEEEEEC
Confidence 478777765 35678888998877443 2221110 0001122221 12333222456777888
Q ss_pred CCC--ceeeeccC-CCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCC--eeeEe
Q 016751 189 RSN--SWKNIAYG-FPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKE--IFQTV 252 (383)
Q Consensus 189 ~t~--~W~~~~~~-~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~--~~~~i 252 (383)
.|+ .|+.-. . -+......... ++..+|.+|...... +......|.+||..+. .|+.-
T Consensus 146 ~tG~~~W~~~~-~~~~~~~~~~~~~---p~v~~~~v~v~~~~~---~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 146 ATGKEVWHQNT-FEGQKGSLTITGA---PRVFKGKVIIGNGGA---EYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTCCEEEEEET-TTTCCSSCBCCSC---CEEETTEEEECCBCT---TTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEEeeecC-CcCcCcCcccccC---cEEECCEEEEEeccc---ccCCCCEEEEEECCCCcEEEEec
Confidence 776 587654 2 11111111222 678899998855421 0012358999998755 56554
No 245
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.40 E-value=1e+02 Score=27.63 Aligned_cols=57 Identities=5% Similarity=0.001 Sum_probs=34.0
Q ss_pred cCeEEEEEcCCCceeeeccCCCcee----eeccCcccceeE-------ECceEEEEEeeccCCCCCCCcEEEEEECCCCe
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSI----EINRSHINSSVF-------LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEI 248 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~----~~~~~~~~~~v~-------~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~ 248 (383)
.-.++.|+.+++.|+-.- .++... ...... +|. .+|.+|.-...+ .+.++|..+++
T Consensus 66 dG~l~a~~~~~G~~~~~~-~~~~lv~~SP~~~~~~---pvv~~~~~~~~~g~Vy~Gs~~g---------~l~ald~~tG~ 132 (339)
T 2be1_A 66 DGNIYYFNAHQGLQKLPL-SIRQLVSTSPLHLKTN---IVVNDSGKIVEDEKVYTGSMRT---------IMYTINMLNGE 132 (339)
T ss_dssp TTEEEEEETTTEEEEEEE-EHHHHHTTCSEEEECC-------------CCEEEEECEEEE---------EEEEEETTTCC
T ss_pred CCEEEEEECCCCcEEeee-ccccceeccccccCCC---ceeecccccccCCEEEEEecCC---------EEEEEECCCCc
Confidence 557888888888765322 222111 110111 455 799999977776 89999998764
Q ss_pred e
Q 016751 249 F 249 (383)
Q Consensus 249 ~ 249 (383)
-
T Consensus 133 ~ 133 (339)
T 2be1_A 133 I 133 (339)
T ss_dssp E
T ss_pred E
Confidence 3
No 246
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=30.18 E-value=3.7e+02 Score=25.62 Aligned_cols=71 Identities=11% Similarity=0.100 Sum_probs=41.2
Q ss_pred EccCceEEEeecCCCCceEEEEccCccceeecC-CC-----CCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCC
Q 016751 117 GSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLP-RP-----SLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRS 190 (383)
Q Consensus 117 ~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP-~~-----~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t 190 (383)
-+.+|-++.... .++.+.+||..+++....- .. ........+.+.|. + -.++.......+.+++.++
T Consensus 198 fspdg~~las~s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd---g--~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 198 YNPDGSLFASTG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD---G--TKIASASADKTIKIWNVAT 270 (611)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT---S--SEEEEEETTSEEEEEETTT
T ss_pred ECCCCCEEEEEE--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC---C--CEEEEEeCCCeEEEEeCCC
Confidence 345565555443 6778999998887655432 11 11112256666664 2 2344333366899999988
Q ss_pred Ccee
Q 016751 191 NSWK 194 (383)
Q Consensus 191 ~~W~ 194 (383)
+...
T Consensus 271 ~~~~ 274 (611)
T 1nr0_A 271 LKVE 274 (611)
T ss_dssp TEEE
T ss_pred Ccee
Confidence 7654
No 247
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.02 E-value=2.4e+02 Score=23.46 Aligned_cols=145 Identities=10% Similarity=0.027 Sum_probs=71.7
Q ss_pred EEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-
Q 016751 174 VVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV- 252 (383)
Q Consensus 174 Vv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i- 252 (383)
++++.....+.|++..+++-...- ..........+- ...-+|.....+..+ ..|..+|+.+++....
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~-~~~~~~~~V~~v---~~~~~~~~l~sgs~D--------g~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLL-QMEQPGEYISSV---AWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEE-ECCSTTCCEEEE---EECTTSSEEEEEETT--------SEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEE-EecCCCCeEEEE---EECCCCCEEEEEECC--------CcEEEeecCCceeEEEe
Confidence 455555678999999998664332 111100000000 122355554444433 5899999988765332
Q ss_pred CCCCCCCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEe
Q 016751 253 MMPYDLSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGEC 332 (383)
Q Consensus 253 ~lP~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~ 332 (383)
... . .........+.+.+..... ..+.+|..... ...+..+...........+..+|..++. .
T Consensus 106 ~~h-~-----~~~~~~~~~~~~l~s~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~ 168 (318)
T 4ggc_A 106 TSH-S-----ARVGSLSWNSYILSSGSRS----GHIHHHDVRVA-----EHHVATLSGHSQEVCGLRWAPDGRHLAS--G 168 (318)
T ss_dssp ECC-S-----SCEEEEEEETTEEEEEETT----SEEEEEETTSS-----SCEEEEEECCSSCEEEEEECTTSSEEEE--E
T ss_pred cCc-c-----ceEEEeecCCCEEEEEecC----CceEeeecCCC-----ceeEEEEcCccCceEEEEEcCCCCEEEE--E
Confidence 221 1 1122233345554444444 36777765531 1222222221112444455566666665 4
Q ss_pred eCCceEEEEEeCCCCe
Q 016751 333 RHGGYGLLVYNPHSDT 348 (383)
Q Consensus 333 ~~~~~~~~~yd~~t~~ 348 (383)
..++ .+.++|.++++
T Consensus 169 ~~d~-~i~iwd~~~~~ 183 (318)
T 4ggc_A 169 GNDN-LVNVWPSAPGE 183 (318)
T ss_dssp ETTS-CEEEEESSCBT
T ss_pred ecCc-ceeEEECCCCc
Confidence 2455 38888887754
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=29.48 E-value=2.5e+02 Score=25.17 Aligned_cols=51 Identities=12% Similarity=-0.068 Sum_probs=30.7
Q ss_pred eEEEEEecCCCceeEEEEEeeCCc-EEEEEEee-CCceEEEEEeCCCCeEE-EEEEec
Q 016751 302 WTKLYTIEKPQRIWWPLGFTERGK-IFIRGECR-HGGYGLLVYNPHSDTFK-CIGVHL 356 (383)
Q Consensus 302 W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~-~~~~~~~~yd~~t~~~~-~v~~~~ 356 (383)
...+.+|+... ...-+.+..+|+ +|+. .. ... .+.++|++|.+.. .+...+
T Consensus 304 ~~vv~~i~vg~-~p~gi~~s~Dg~~l~va--~~~~~~-~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 304 GQTSGPISNGH-DSDAIIAAQDGASDNYA--NSAGTE-VLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp CCEEECCEEEE-EECEEEECCSSSCEEEE--EETTTT-EEEEEESSSCEEEEECCCCS
T ss_pred CeEEEEEECCC-CcceEEECCCCCEEEEE--ccCCCC-eEEEEECCCCcEEEEEECCC
Confidence 45566666542 123345566775 7777 53 244 5999999998865 344333
No 249
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=29.37 E-value=2.6e+02 Score=23.59 Aligned_cols=142 Identities=6% Similarity=0.001 Sum_probs=71.9
Q ss_pred cCeEEEEEcCCCceeeeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCC
Q 016751 180 NADAEVYSLRSNSWKNIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDL 258 (383)
Q Consensus 180 ~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~ 258 (383)
...+..|+..++.-+... .+...... ...-+|.+ |++... .|..||+.+.++..+ ..+ ..
T Consensus 34 ~~~i~~~d~~~~~~~~~~--~~~~~~~i------~~~~dG~l-~v~~~~---------~l~~~d~~~g~~~~~~~~~-~~ 94 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVT--MDAPVSSV------ALRQSGGY-VATIGT---------KFCALNWKEQSAVVLATVD-ND 94 (297)
T ss_dssp TTEEEEEETTTCCEEEEE--CSSCEEEE------EEBTTSSE-EEEETT---------EEEEEETTTTEEEEEEECC-TT
T ss_pred CCEEEEEECCCCcEEEEe--CCCceEEE------EECCCCCE-EEEECC---------eEEEEECCCCcEEEEEecC-CC
Confidence 457788888776554433 12111100 23336774 555433 899999999988776 332 22
Q ss_pred CCCCCceEEEEe-CCeEEEEEecCCC-----CccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCc-EEEEEE
Q 016751 259 STDDADKYLNVF-DGYLCVFATIPNN-----TFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGK-IFIRGE 331 (383)
Q Consensus 259 ~~~~~~~~l~~~-~g~L~~v~~~~~~-----~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~ 331 (383)
........++.. +|+|++....... ....-.||.++.. ..-..+.. ... ...-+++..+|+ +|+.
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g~~~~~~~-~~~--~pngi~~spdg~~lyv~-- 166 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---HHVKKYFD-QVD--ISNGLDWSLDHKIFYYI-- 166 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---SCEEEEEE-EES--BEEEEEECTTSCEEEEE--
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---CCEEEEee-ccc--cccceEEcCCCCEEEEe--
Confidence 111112234443 5888876644320 0134578888753 22222211 111 123345556665 5565
Q ss_pred eeCCceEEEEEeC--CCCeE
Q 016751 332 CRHGGYGLLVYNP--HSDTF 349 (383)
Q Consensus 332 ~~~~~~~~~~yd~--~t~~~ 349 (383)
..... .+..||. +++++
T Consensus 167 ~~~~~-~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 167 DSLSY-SVDAFDYDLQTGQI 185 (297)
T ss_dssp EGGGT-EEEEEEECTTTCCE
T ss_pred cCCCC-cEEEEeccCCCCcc
Confidence 31233 4777765 66655
No 250
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=29.09 E-value=3.9e+02 Score=25.54 Aligned_cols=190 Identities=9% Similarity=-0.013 Sum_probs=96.0
Q ss_pred ceEEEEccCc------cceeecC-CCCCCCCceeEEEeccCCCCCCeEEEEEEec-------CeEEEEEcC-CCc---ee
Q 016751 133 SLIYLWNPLI------KKYMTLP-RPSLNPRYLGFGVNSVSGHLDDFKVVTISVN-------ADAEVYSLR-SNS---WK 194 (383)
Q Consensus 133 ~~~~v~NP~t------~~~~~LP-~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~-------~~~~vyss~-t~~---W~ 194 (383)
.+++++|..+ ++...|. .... ......+.|. +.+-++.-... ..+.+++.. ++. .+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpD----G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPD----GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTT----SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC--cccCceECCC----CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5899999998 7777775 3221 1123334442 22322222111 478888888 563 33
Q ss_pred eeccCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCCCCCCC-CCC---ceEEEE
Q 016751 195 NIAYGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMPYDLST-DDA---DKYLNV 269 (383)
Q Consensus 195 ~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~-~~~---~~~l~~ 269 (383)
.+......... .. ...-+|.+|+.+... ....|..+|+.+.++..+ ... .... ... ...+..
T Consensus 235 ~l~~~~~~~~~---~~---~~spdg~l~~~~~~~------~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~~~~ 301 (662)
T 3azo_A 235 TLLGGPEEAIA---QA---EWAPDGSLIVATDRT------GWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRWFAP 301 (662)
T ss_dssp EEEEETTBCEE---EE---EECTTSCEEEEECTT------SSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCSEEE
T ss_pred EeCCCCCceEc---ce---EECCCCeEEEEECCC------CCeEEEEEECCCCceeeccccc-ccccCccccccCceEeE
Confidence 33311111110 00 122378888766543 234899999988777655 222 1110 000 112444
Q ss_pred e-CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCce-EEEEEeCCCC
Q 016751 270 F-DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGY-GLLVYNPHSD 347 (383)
Q Consensus 270 ~-~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~yd~~t~ 347 (383)
. +|++++.... + ...||.++..+ .. ...+.........+...+.+.+++.... .+.. .++.+|++++
T Consensus 302 ~~~~~~~~~~~~-~----~~~l~~~d~~~--~~---~~~l~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 302 LANGLIAVVHGK-G----AAVLGILDPES--GE---LVDAAGPWTEWAATLTVSGTRAVGVAAS-PRTAYEVVELDTVTG 370 (662)
T ss_dssp CTTSCEEEEEBS-S----SCEEEEEETTT--TE---EEECCSSCCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEETTTC
T ss_pred eCCCEEEEEEEc-C----ccEEEEEECCC--Cc---EEEecCCCCeEEEEEecCCCEEEEEEcC-CCCCCEEEEEECCCC
Confidence 4 5777666554 4 67899887532 22 2334332212333312234455555111 2221 6889999999
Q ss_pred eEEEE
Q 016751 348 TFKCI 352 (383)
Q Consensus 348 ~~~~v 352 (383)
+.+.+
T Consensus 371 ~~~~l 375 (662)
T 3azo_A 371 RARTI 375 (662)
T ss_dssp CEEEE
T ss_pred ceEEe
Confidence 88776
No 251
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=28.68 E-value=2.9e+02 Score=23.97 Aligned_cols=109 Identities=11% Similarity=-0.014 Sum_probs=57.3
Q ss_pred CceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEe------cCeEEEEEcCCCceeeeccCCCceee
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISV------NADAEVYSLRSNSWKNIAYGFPRSIE 205 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~------~~~~~vyss~t~~W~~~~~~~p~~~~ 205 (383)
...++++|..+++...+...... .....+.|. +.-+++.... ...+.+++..++..+.+. .......
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~--~~~~~~sp~----dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQW--LGHPIYRPY----DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-THAEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC--EEEEEEETT----EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-CCCTTEE
T ss_pred cceEEEEECCCCceEEeecCCcc--ccccEECCC----CCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-eCCCCcc
Confidence 46899999999887776433221 133444441 1223333332 236777787776666554 2221100
Q ss_pred eccCcccceeEECce-EEEEEeeccCCCCCCCcEEEEEECCCCeeeEe-CCC
Q 016751 206 INRSHINSSVFLNGS-VHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV-MMP 255 (383)
Q Consensus 206 ~~~~~~~~~v~~~G~-lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP 255 (383)
... . ...-+|. |++..... +.....|..+|+.+.+...+ ..|
T Consensus 240 ~~~-~---~~spdg~~l~~~~~~~----~~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 240 CTH-E---FWVPDGSALVYVSYLK----GSPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp EEE-E---EECTTSSCEEEEEEET----TCCCEEEEEECTTTCCEEEEEEEC
T ss_pred ccc-c---eECCCCCEEEEEecCC----CCCcceEEEEecCCCceEEEEcCC
Confidence 000 0 2223665 66665543 11223599999998876655 444
No 252
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=28.63 E-value=4.1e+02 Score=25.72 Aligned_cols=195 Identities=10% Similarity=-0.073 Sum_probs=0.0
Q ss_pred eEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCc-eeeeccCC
Q 016751 122 VLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNS-WKNIAYGF 200 (383)
Q Consensus 122 ll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~-W~~~~~~~ 200 (383)
||+..+ ...+.+.|...+........+......++.+|+. .+.-.+.-+. ...+..++..... ++.+- ..
T Consensus 11 ~~~~~~----~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~---~~~ly~sD~~-~~~I~r~~~~g~~~~~~v~-~~ 81 (619)
T 3s94_A 11 LLLYAN----RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS---HGLIYWSDVS-EEAIKRTEFNKTESVQNVV-VS 81 (619)
T ss_dssp CEEEEC----SSBEEEECCC---------CBCCSCEEEEEEETT---TTEEEEEETT-TTEEEEEEC-----CEEEE-CS
T ss_pred eEEEec----cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeC---CCEEEEEECC-CCeEEEEEccCCCceEEEE-eC
Q ss_pred CceeeeccCcccceeEE-CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEeCCeEEEEEe
Q 016751 201 PRSIEINRSHINSSVFL-NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVFDGYLCVFAT 279 (383)
Q Consensus 201 p~~~~~~~~~~~~~v~~-~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~g~L~~v~~ 279 (383)
.......- ++-. +|.+||..... ..|.++|+....-..+... ..... ....+-..+|.||+...
T Consensus 82 ~~~~P~Gl-----AvD~~~~~ly~~d~~~--------~~I~v~~~dG~~~~~l~~~-~l~~P-~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 82 GLLSPDGL-----ACDWLGEKLYWTDSET--------NRIEVSNLDGSLRKVLFWQ-ELDQP-RAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCSCEEEE-----EEETTTTEEEEEETTT--------TEEEEEETTSCSCEEEECS-SCSCC-CCEEEETTTTEEEEEEC
T ss_pred CCCCcCeE-----EEEecCCEEEEEeCCC--------CEEEEEECCCCCEEEEEeC-CCCCC-ceEEEecCCCeEEEecc
Q ss_pred cCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEe-eCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 280 IPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFT-ERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 280 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
... ..+..-.++. ..-..+..-.+.. ..-+++. .++.||+. . .....+..+|++....+.+
T Consensus 147 g~~---~~I~r~~~dG----~~~~~l~~~~~~~--P~Glald~~~~~LY~a--D-~~~~~I~~~~~dG~~~~~~ 208 (619)
T 3s94_A 147 GEV---PKIERAGMDG----SSRFIIINSEIYW--PNGLTLDYEEQKLYWA--D-AKLNFIHKSNLDGTNRQAV 208 (619)
T ss_dssp SSS---CEEEEEETTS----CSCEEEECSSCSS--EEEEEEETTTTEEEEE--E-TTTCCEEEESSSCCEEC--
T ss_pred CCC---CEEEEEECCC----CceEEEEeCCCCC--CcEEEEEccCCEEEEE--e-CCCCeEEEecCCCCccEEE
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=28.10 E-value=2.7e+02 Score=23.45 Aligned_cols=15 Identities=0% Similarity=-0.219 Sum_probs=8.3
Q ss_pred EEEEEECCCCeeeEe
Q 016751 238 LIVSFDFAKEIFQTV 252 (383)
Q Consensus 238 ~il~fD~~~~~~~~i 252 (383)
.+.+||...+.....
T Consensus 236 gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 236 HLYAINPDGTEKWRF 250 (330)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred eEEEECCCCCEeEEe
Confidence 666676654444333
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=26.47 E-value=3.1e+02 Score=23.66 Aligned_cols=140 Identities=9% Similarity=0.023 Sum_probs=65.0
Q ss_pred eEEEEEcCC--CceeeeccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCC
Q 016751 182 DAEVYSLRS--NSWKNIAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYD 257 (383)
Q Consensus 182 ~~~vyss~t--~~W~~~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~ 257 (383)
...+|-+.+ .+|+.+. . +..... . +|.. ++.+|..+. . ..|+.-+=.-++|+.+..+ .
T Consensus 14 ~~~~~~s~d~g~~W~~~~-~-~~~~~~-~-----~v~~~~~~~~~~~G~-~--------g~i~~s~DgG~tW~~~~~~-~ 75 (327)
T 2xbg_A 14 PRGSAIPALDYNPWEAIQ-L-PTTATI-L-----DMSFIDRHHGWLVGV-N--------ATLMETRDGGQTWEPRTLV-L 75 (327)
T ss_dssp ----CCCBCSSCCEEEEE-C-SCSSCE-E-----EEEESSSSCEEEEET-T--------TEEEEESSTTSSCEECCCC-C
T ss_pred ccceeecCCCCCCceEee-c-CCCCcE-E-----EEEECCCCcEEEEcC-C--------CeEEEeCCCCCCCeECCCC-C
Confidence 345566644 6899887 2 211111 1 4444 345555332 2 2455443345699988655 2
Q ss_pred CCCCCCceEEEEeCCeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEec-CCCceeEEEEEeeCCcEEEEEEeeCCc
Q 016751 258 LSTDDADKYLNVFDGYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIE-KPQRIWWPLGFTERGKIFIRGECRHGG 336 (383)
Q Consensus 258 ~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~g~i~~~~~~~~~~ 336 (383)
.........+...++.+++++... .|+.-.+. ...|.++.... ++. ....+.+..++.+++. . ..+
T Consensus 76 ~~~~~~~~~i~~~~~~~~~~g~~g-------~i~~S~Dg--G~tW~~~~~~~~~~~-~~~~i~~~~~~~~~~~--~-~~g 142 (327)
T 2xbg_A 76 DHSDYRFNSVSFQGNEGWIVGEPP-------IMLHTTDG--GQSWSQIPLDPKLPG-SPRLIKALGNGSAEMI--T-NVG 142 (327)
T ss_dssp SCCCCEEEEEEEETTEEEEEEETT-------EEEEESST--TSSCEECCCCTTCSS-CEEEEEEEETTEEEEE--E-TTC
T ss_pred CCCCccEEEEEecCCeEEEEECCC-------eEEEECCC--CCCceECccccCCCC-CeEEEEEECCCCEEEE--e-CCc
Confidence 111112233444567777764321 34444432 36799865331 211 1222333455666666 4 333
Q ss_pred eEEEEEeCCCCeEEEEE
Q 016751 337 YGLLVYNPHSDTFKCIG 353 (383)
Q Consensus 337 ~~~~~yd~~t~~~~~v~ 353 (383)
. ++.-+-..++|+.+.
T Consensus 143 ~-v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 143 A-IYRTKDSGKNWQALV 158 (327)
T ss_dssp C-EEEESSTTSSEEEEE
T ss_pred c-EEEEcCCCCCCEEee
Confidence 2 444444445676663
No 255
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.05 E-value=4.1e+02 Score=24.56 Aligned_cols=181 Identities=14% Similarity=0.128 Sum_probs=87.5
Q ss_pred CCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeeccCCCceeeeccCc
Q 016751 131 DRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIAYGFPRSIEINRSH 210 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~ 210 (383)
.++.+.++|...+....+..... ...++.+.|. + . .++.......+.+++.....-+.+. .........
T Consensus 241 ~d~~i~~w~~~~~~~~~~~~~~~--~v~~v~~~~d---~-~-~l~~~~~d~~i~~w~~~~~~~~~~~-~h~~~v~~~--- 309 (577)
T 2ymu_A 241 DDKTVKLWNRNGQLLQTLTGHSS--SVNGVAFRPD---G-Q-TIASASDDKTVKLWNRNGQLLQTLT-GHSSSVWGV--- 309 (577)
T ss_dssp TTSCEEEECTTSCEEEEECCCSS--CEEEEEECTT---S-S-EEEEEETTSCEEEEETTSCEEEEEC-CCSSCEEEE---
T ss_pred CCCEEEEEeCCCCEEEEEecCCC--CEEEEEEcCC---C-C-EEEEEeCCCEEEEEeCCCcEEEEEe-cCCCCeEEE---
Confidence 45567788865554444433211 1134455443 2 2 2333333556777776544333333 111111100
Q ss_pred ccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCeEEEEEecCCCCccEEE
Q 016751 211 INSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGYLCVFATIPNNTFRSYE 289 (383)
Q Consensus 211 ~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~~~l~ 289 (383)
.+.-+|.....+... ..|..+|...+....+..+ .. ....++.. +|+..+....+ ..+.
T Consensus 310 ---~~~~~~~~l~t~~~d--------~~i~~w~~~~~~~~~~~~~-~~----~v~~~~~s~~g~~l~~~~~d----g~v~ 369 (577)
T 2ymu_A 310 ---AFSPDGQTIASASDD--------KTVKLWNRNGQHLQTLTGH-SS----SVWGVAFSPDGQTIASASDD----KTVK 369 (577)
T ss_dssp ---EECTTSSEEEEEETT--------SCEEEEETTSCEEEEECCC-SS----CEEEEEECTTSSEEEEEETT----SEEE
T ss_pred ---EECCCCCEEEEEeCC--------CeEEEEeCCCCeeEEEeCC-CC----CEEEEEECCCCCEEEEEeCC----CEEE
Confidence 122245444444332 4678889887776655432 11 11234433 35555555444 4899
Q ss_pred EEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 290 LWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 290 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
+|..+. .....+.........+++..+|+.++. ...++ .+..||...+..+.+
T Consensus 370 ~~~~~~-------~~~~~~~~~~~~v~~~~~s~dg~~l~~--~~~d~-~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 370 LWNRNG-------QLLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDK-TVKLWNRNGQLLQTL 422 (577)
T ss_dssp EEETTC-------CEEEEEECCSSCEEEEEECTTSSCEEE--EETTS-EEEEECTTCCEEEEE
T ss_pred EEcCCC-------CEEEEecCCCCCeEEEEECCCCCEEEE--EeCCC-EEEEEeCCCCEEEEe
Confidence 997432 122333322112455666677765555 32455 488888766555544
No 256
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=24.49 E-value=93 Score=24.68 Aligned_cols=39 Identities=8% Similarity=0.327 Sum_probs=27.7
Q ss_pred eEEEEccCcc-ceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEE
Q 016751 134 LIYLWNPLIK-KYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTIS 178 (383)
Q Consensus 134 ~~~v~NP~t~-~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~ 178 (383)
.++++||.|+ +|++.-... ..+.+.+|.. .+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~~---~~V~i~~d~~---rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKHA---VTVSYFYDST---RNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEESCSSC---EEEEEEEETT---TTEEEEEEEE
T ss_pred EEEEECCCCCCceeecCCCC---eEEEEEEcCC---CCEEEEEEcc
Confidence 6899999997 897643322 1255667877 7789998865
No 257
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=24.03 E-value=2.7e+02 Score=24.77 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=50.9
Q ss_pred CcEEEEEECC---CC-eeeEeCCCCCCCCC-------C--CceEEEEe-CCeEEEEEecC-CCCccEEEEEEeccCCCC-
Q 016751 236 PWLIVSFDFA---KE-IFQTVMMPYDLSTD-------D--ADKYLNVF-DGYLCVFATIP-NNTFRSYELWVMKEYGLT- 299 (383)
Q Consensus 236 ~~~il~fD~~---~~-~~~~i~lP~~~~~~-------~--~~~~l~~~-~g~L~~v~~~~-~~~~~~l~iW~l~~~~~~- 299 (383)
...+++||+. +. .-..+.|+ ..... . ....+++- +|..|+.+... . .||+++-++..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~-~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~------~I~rV~pdG~~~ 171 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFE-KVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP------AIARVSADGKTV 171 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESH-HHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC------EEEEECTTSCCE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCc-cccccccccccccccCCceeEECCCCCEEEeCCCCCC------eEEEEeCCCCEE
Confidence 4689999988 33 33334443 21110 0 11234433 48888887655 3 37777654321
Q ss_pred CCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCCC
Q 016751 300 ESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHSD 347 (383)
Q Consensus 300 ~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t~ 347 (383)
..|-....-........=+.+..+|.++++ ....+ .++.+|+++.
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv--~~~~g-~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIA--FGGPR-ALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEE--ESSSS-SEEEEECSSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEE--EcCCC-eEEEEcCCCC
Confidence 123221110011001222455567766666 42344 4999998853
No 258
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=23.61 E-value=3.6e+02 Score=23.33 Aligned_cols=112 Identities=8% Similarity=-0.049 Sum_probs=57.9
Q ss_pred ECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe--CCeEEEEEecCCCCccEEEEEEec
Q 016751 217 LNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF--DGYLCVFATIPNNTFRSYELWVMK 294 (383)
Q Consensus 217 ~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~~~l~iW~l~ 294 (383)
.+|.+||..... ..|..+|+....-..+.-. ... ....+++. +|.||+..... .-.|++++
T Consensus 89 ~~g~ly~~d~~~--------~~I~~~~~dG~~~~~l~~~--~~~--~P~giavdp~~g~ly~td~~~-----~~~I~r~~ 151 (318)
T 3sov_A 89 LGEKLYWTDSET--------NRIEVSNLDGSLRKVLFWQ--ELD--QPRAIALDPSSGFMYWTDWGE-----VPKIERAG 151 (318)
T ss_dssp TTTEEEEEETTT--------TEEEEEETTSCSCEEEECS--SCS--SEEEEEEEGGGTEEEEEECSS-----SCEEEEEE
T ss_pred CCCeEEEEECCC--------CEEEEEECCCCcEEEEEeC--CCC--CccEEEEeCCCCEEEEEecCC-----CCEEEEEE
Confidence 368999986544 5899999876543333111 111 12234443 58888876432 23466665
Q ss_pred cCCCCCCeEEEEEecCCCceeEEEEEee-CCcEEEEEEeeCCceEEEEEeCCCCeEEEE
Q 016751 295 EYGLTESWTKLYTIEKPQRIWWPLGFTE-RGKIFIRGECRHGGYGLLVYNPHSDTFKCI 352 (383)
Q Consensus 295 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~~~~~~~~~~~yd~~t~~~~~v 352 (383)
-.+. .. ..+..-.+. ...-+++.. ++.||+. ..... .+..+|+.....+.+
T Consensus 152 ~dG~-~~-~~~~~~~l~--~Pnglavd~~~~~lY~a--D~~~~-~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 152 MDGS-SR-FIIINSEIY--WPNGLTLDYEEQKLYWA--DAKLN-FIHKSNLDGTNRQAV 203 (318)
T ss_dssp TTSC-SC-EEEECSSCS--CEEEEEEETTTTEEEEE--ETTTT-EEEEEETTSCSCEEE
T ss_pred cCCC-Ce-EEEEECCCC--CccEEEEeccCCEEEEE--ECCCC-EEEEEcCCCCceEEE
Confidence 4332 11 111111111 123344443 5678887 42233 588888876544443
No 259
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.06 E-value=75 Score=21.27 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=16.9
Q ss_pred CCceEEEEccCccceeecCCC
Q 016751 131 DRSLIYLWNPLIKKYMTLPRP 151 (383)
Q Consensus 131 ~~~~~~v~NP~t~~~~~LP~~ 151 (383)
.+++.|.+||.|++.+.--|.
T Consensus 28 ~dGR~fyyN~~Tk~S~WekP~ 48 (73)
T 2dk7_A 28 GDERVFFYNPTTRLSMWDRPD 48 (73)
T ss_dssp SSSCEEEEETTTTEECSSCCT
T ss_pred CCCCEEEecCcccceeccCCh
Confidence 688999999999997764443
No 260
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.79 E-value=4.3e+02 Score=23.91 Aligned_cols=102 Identities=11% Similarity=0.005 Sum_probs=0.0
Q ss_pred ccCceEEEeecC-CCCceEEEEccCccceeecCCCCC---CCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCce
Q 016751 118 SCNGVLCFCSNG-SDRSLIYLWNPLIKKYMTLPRPSL---NPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSW 193 (383)
Q Consensus 118 s~~Gll~~~~~~-~~~~~~~v~NP~t~~~~~LP~~~~---~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W 193 (383)
.|+||+.+..-. +..++++|.| |+.--.+..+.. ....-.+++|-. +++|+++...
T Consensus 82 ~~~~lvsV~~v~iD~~~rLWVLD--tG~~~~~~~~~~~~~~~~pkLv~~DL~---t~~~~li~~y--------------- 141 (381)
T 3q6k_A 82 TGKELTSIYQPVIDDCRRLWVVD--IGSVEYRSRGAKDYPSHRPAIVAYDLK---QPNYPEVVRY--------------- 141 (381)
T ss_dssp SSCSSSCEEEEEECTTCEEEEEE--CSSCSSCSTTGGGSCCCCCEEEEEESS---STTCCEEEEE---------------
T ss_pred cccceEEeeEEEEcCCCcEEEEe--CCCcCcCCCccccCCCCCceEEEEECC---CCCceeEEEE---------------
Q ss_pred eeeccCCCceeeeccCcccceeEE---------CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEe
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFL---------NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTV 252 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~---------~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i 252 (383)
.+|.......+..+.-++- +|.+|...... ..|++||+.+++...+
T Consensus 142 -----~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~--------~gLIVydl~~~~swRv 196 (381)
T 3q6k_A 142 -----YFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLR--------GALFIYDHKKQDSWNV 196 (381)
T ss_dssp -----ECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTT--------TEEEEEETTTTEEEEE
T ss_pred -----ECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCC--------CcEEEEECCCCcEEEE
No 261
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=22.31 E-value=5.1e+02 Score=24.59 Aligned_cols=186 Identities=12% Similarity=0.133 Sum_probs=90.3
Q ss_pred ccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCCceeeec
Q 016751 118 SCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSNSWKNIA 197 (383)
Q Consensus 118 s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~~W~~~~ 197 (383)
+-+|-.++... .++.+.+||..+++.....+........++.+.+. . +++.......+.+++..++.-....
T Consensus 333 spdg~~l~s~s--~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~---~---~l~s~s~d~~v~~w~~~~~~~~~~~ 404 (611)
T 1nr0_A 333 SADGKTLFSAD--AEGHINSWDISTGISNRVFPDVHATMITGIKTTSK---G---DLFTVSWDDHLKVVPAGGSGVDSSK 404 (611)
T ss_dssp CTTSSEEEEEE--TTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT---S---CEEEEETTTEEEEECSSSSSSCTTS
T ss_pred eCCCCEEEEEe--CCCcEEEEECCCCceeeecccCCcceEEEEEECCC---C---cEEEEEcCCceEEeecCCccccccc
Confidence 44555554443 57789999999887765432222112234444322 1 3444333556777776654321100
Q ss_pred ---cCCCceeeeccCcccceeEECceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceEEEEe-CCe
Q 016751 198 ---YGFPRSIEINRSHINSSVFLNGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKYLNVF-DGY 273 (383)
Q Consensus 198 ---~~~p~~~~~~~~~~~~~v~~~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~g~ 273 (383)
......... . ++.-+|.+...... ..+..++. .....+... . ....++.. +|+
T Consensus 405 ~~~~~~~~~~~~---~---~~s~dg~~~~~~~~---------~~v~~~~~--~~~~~~~~~-~-----~v~~va~spdg~ 461 (611)
T 1nr0_A 405 AVANKLSSQPLG---L---AVSADGDIAVAACY---------KHIAIYSH--GKLTEVPIS-Y-----NSSCVALSNDKQ 461 (611)
T ss_dssp CCEEECSSCEEE---E---EECTTSSCEEEEES---------SEEEEEET--TEEEEEECS-S-----CEEEEEECTTSC
T ss_pred eeeeecCCCCcE---E---EEeCCCcEEEEEeC---------ceEEEEeC--CceeeeecC-C-----CceEEEEeCCCC
Confidence 000000000 0 12224433222222 24556662 223333222 1 11234433 466
Q ss_pred EEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCceEEEEEeCCC
Q 016751 274 LCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGGYGLLVYNPHS 346 (383)
Q Consensus 274 L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~yd~~t 346 (383)
+.+.+..+ ..+.+|.++. ............. ....+++..+|..++. ...++ .+..||..+
T Consensus 462 ~lasgs~D----~~v~lwd~~~----~~~~~~~~~~h~~-~v~~v~fspdg~~las--~s~d~-~v~~w~~~~ 522 (611)
T 1nr0_A 462 FVAVGGQD----SKVHVYKLSG----ASVSEVKTIVHPA-EITSVAFSNNGAFLVA--TDQSR-KVIPYSVAN 522 (611)
T ss_dssp EEEEEETT----SEEEEEEEET----TEEEEEEEEECSS-CEEEEEECTTSSEEEE--EETTS-CEEEEEGGG
T ss_pred EEEEeCCC----CeEEEEEccC----CceeeeeccCCCC-ceEEEEECCCCCEEEE--EcCCC-CEEEEEcCC
Confidence 66666555 4999999975 2233333333322 3566777788877776 42444 488888876
No 262
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=22.20 E-value=3.9e+02 Score=23.17 Aligned_cols=183 Identities=8% Similarity=0.026 Sum_probs=0.0
Q ss_pred EEccCceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC--ce
Q 016751 116 VGSCNGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN--SW 193 (383)
Q Consensus 116 ~~s~~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~--~W 193 (383)
....+..+.+... .+..+.|||..+++... .........++.+++. .+.+.....+.+|+..++ .-
T Consensus 66 ~~~~~~~~~~~~~--~d~~v~iWd~~~~~~~~--~~~~~~~v~~v~~~~~--------~~~~~~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 66 MLHRTNYVAFVTG--VKEVVHIWDDVKKQDVS--RIKVDAPVKDLFLSRE--------FIVVSYGDVISVFKFGNPWKRI 133 (355)
T ss_dssp ECTTSSEEEEECS--STTEEEEEETTTTEEEE--EEECSSCEEEEEECSS--------EEEEEETTEEEEEESSTTCCBS
T ss_pred EcCCCCEEEEEEC--CccEEEEEECCCCcEEE--EEECCCceEEEEEcCC--------EEEEEEcCEEEEEECCCCceee
Q ss_pred eeeccCCCceeeeccCcccceeEECceEEEE-EeeccCCCCCCCcEEEEEECCCCe-----------------eeEeCCC
Q 016751 194 KNIAYGFPRSIEINRSHINSSVFLNGSVHWC-ARFSCYHDNSCPWLIVSFDFAKEI-----------------FQTVMMP 255 (383)
Q Consensus 194 ~~~~~~~p~~~~~~~~~~~~~v~~~G~lYw~-~~~~~~~~~~~~~~il~fD~~~~~-----------------~~~i~lP 255 (383)
..+. . +.... .+.. +.+-.. +... ..|..+|+.+.. ...+.-.
T Consensus 134 ~~~~-~-~~~~~--------~~s~-~~la~~sg~~~--------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h 194 (355)
T 3vu4_A 134 TDDI-R-FGGVC--------EFSN-GLLVYSNEFNL--------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH 194 (355)
T ss_dssp SCCE-E-EEEEE--------EEET-TEEEEEESSCT--------TCEEEEECCC------------------CCEEECCC
T ss_pred EEec-c-CCceE--------EEEc-cEEEEeCCCcC--------cEEEEEECCCCCccccccccccccccCcccEEEEcc
Q ss_pred CCCCCCCCceEEEEeCCeEEEEEecCCCCccE-EEEEEeccCCCCCCeEEEEEec---CCCceeEEEEEeeCCcEEEEEE
Q 016751 256 YDLSTDDADKYLNVFDGYLCVFATIPNNTFRS-YELWVMKEYGLTESWTKLYTIE---KPQRIWWPLGFTERGKIFIRGE 331 (383)
Q Consensus 256 ~~~~~~~~~~~l~~~~g~L~~v~~~~~~~~~~-l~iW~l~~~~~~~~W~~~~~i~---~~~~~~~~~~~~~~g~i~~~~~ 331 (383)
... -..+.-..+.-+++.+..+ .. +.||-++. ...+..+. ... ....+++..+|..++.
T Consensus 195 -~~~----v~~~~~s~~g~~l~s~s~d---~~~v~iwd~~~------~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s-- 257 (355)
T 3vu4_A 195 -TNP----IKMVRLNRKSDMVATCSQD---GTIIRVFKTED------GVLVREFRRGLDRA-DVVDMKWSTDGSKLAV-- 257 (355)
T ss_dssp -SSC----EEEEEECTTSSEEEEEETT---CSEEEEEETTT------CCEEEEEECTTCCS-CEEEEEECTTSCEEEE--
T ss_pred -CCc----eEEEEECCCCCEEEEEeCC---CCEEEEEECCC------CcEEEEEEcCCCCC-cEEEEEECCCCCEEEE--
Q ss_pred eeCCceEEEEEeCCCC
Q 016751 332 CRHGGYGLLVYNPHSD 347 (383)
Q Consensus 332 ~~~~~~~~~~yd~~t~ 347 (383)
...++. +.++|++++
T Consensus 258 ~s~d~~-v~iw~~~~~ 272 (355)
T 3vu4_A 258 VSDKWT-LHVFEIFND 272 (355)
T ss_dssp EETTCE-EEEEESSCC
T ss_pred EECCCE-EEEEEccCC
No 263
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=21.33 E-value=4.3e+02 Score=23.37 Aligned_cols=101 Identities=13% Similarity=0.164 Sum_probs=49.1
Q ss_pred EEEEEEecCeEEEEEcCCCceee-eccCCCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCee
Q 016751 173 KVVTISVNADAEVYSLRSNSWKN-IAYGFPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIF 249 (383)
Q Consensus 173 kVv~~~~~~~~~vyss~t~~W~~-~~~~~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~ 249 (383)
.++.......+.+|+.++++-.. +. ..+..... . ++.+ +|.....+..+ ..|..+|+.+.+.
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~h~~~v-~-----~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~~ 248 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIE-NSPRHGAV-S-----SICIDEECCVLILGTTR--------GIIDIWDIRFNVL 248 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CCGGGCCE-E-----EEEECTTSCEEEEEETT--------SCEEEEETTTTEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEc-cCCCCCce-E-----EEEECCCCCEEEEEcCC--------CeEEEEEcCCccE
Confidence 34443436789999998864321 11 11011000 0 2222 45555544433 5799999987665
Q ss_pred eE-eCCCCCCCCCCCceEEEEe----CCeEEEEEecCCCCccEEEEEEecc
Q 016751 250 QT-VMMPYDLSTDDADKYLNVF----DGYLCVFATIPNNTFRSYELWVMKE 295 (383)
Q Consensus 250 ~~-i~lP~~~~~~~~~~~l~~~----~g~L~~v~~~~~~~~~~l~iW~l~~ 295 (383)
.. +.++ ... ....+... .+.-+++.+..+ ..+.+|.+..
T Consensus 249 ~~~~~~~-~~~---~v~~~~~~~~~s~~~~~l~s~~~d---g~i~iwd~~~ 292 (437)
T 3gre_A 249 IRSWSFG-DHA---PITHVEVCQFYGKNSVIVVGGSSK---TFLTIWNFVK 292 (437)
T ss_dssp EEEEBCT-TCE---EEEEEEECTTTCTTEEEEEEESTT---EEEEEEETTT
T ss_pred EEEEecC-CCC---ceEEEEeccccCCCccEEEEEcCC---CcEEEEEcCC
Confidence 33 3444 221 11122111 233344444443 5889998864
No 264
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=20.69 E-value=4e+02 Score=22.75 Aligned_cols=153 Identities=15% Similarity=0.114 Sum_probs=76.9
Q ss_pred CceEEEeecCCCCceEEEEccCccceeecCCCCCCCCceeEEEeccCCCCCCeEEEEE-EecCeEEEEEcCCCcee--ee
Q 016751 120 NGVLCFCSNGSDRSLIYLWNPLIKKYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTI-SVNADAEVYSLRSNSWK--NI 196 (383)
Q Consensus 120 ~Gll~~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~-~~~~~~~vyss~t~~W~--~~ 196 (383)
+|-+++... .++.+.+||..+++...+-..........+.+.|. + . ++.. .....+.+|+.+++.-. ..
T Consensus 138 ~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd---g-~--~lasg~~dg~i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 138 NTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD---S-L--LLALYSPDGILDVYNLSSPDQASSRF 209 (343)
T ss_dssp -CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT---S-C--EEEEECTTSCEEEEESSCTTSCCEEC
T ss_pred CCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC---C-C--EEEEEcCCCEEEEEECCCCCCCccEE
Confidence 454444432 57789999998887755433222222345666654 2 2 2333 23678999999887533 22
Q ss_pred ccC-CCceeeeccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeee-EeC-CCCCCCCCCCceEEEEe-
Q 016751 197 AYG-FPRSIEINRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQ-TVM-MPYDLSTDDADKYLNVF- 270 (383)
Q Consensus 197 ~~~-~p~~~~~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~-~i~-lP~~~~~~~~~~~l~~~- 270 (383)
. . ...... ++.+ +|.....+. . ..|..+|+.+..-. .+. +. ..........+.-.
T Consensus 210 ~-~~h~~~v~--------~l~fs~~g~~l~s~~-~--------~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 210 P-VDEEAKIK--------EVKFADNGYWMVVEC-D--------QTVVCFDLRKDVGTLAYPTYT-IPEFKTGTVTYDIDD 270 (343)
T ss_dssp C-CCTTSCEE--------EEEECTTSSEEEEEE-S--------SBEEEEETTSSTTCBSSCCCB-C-----CCEEEEECT
T ss_pred e-ccCCCCEE--------EEEEeCCCCEEEEEe-C--------CeEEEEEcCCCCcceeecccc-cccccccceEEEECC
Confidence 2 1 011111 2222 454444333 2 27999999875421 111 10 00000001123333
Q ss_pred CCeEEEEEecCCCCccEEEEEEeccCCCCCCeEE
Q 016751 271 DGYLCVFATIPNNTFRSYELWVMKEYGLTESWTK 304 (383)
Q Consensus 271 ~g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~ 304 (383)
+|+..++....+ ..+.||.++.. ...|..
T Consensus 271 ~g~~l~~~s~~d---~~i~v~~~~~~--~~~~~~ 299 (343)
T 3lrv_A 271 SGKNMIAYSNES---NSLTIYKFDKK--TKNWTK 299 (343)
T ss_dssp TSSEEEEEETTT---TEEEEEEECTT--TCSEEE
T ss_pred CCCEEEEecCCC---CcEEEEEEccc--ccceEe
Confidence 366655555423 58999999763 356887
No 265
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=20.54 E-value=5.7e+02 Score=24.53 Aligned_cols=190 Identities=9% Similarity=0.044 Sum_probs=93.1
Q ss_pred CceEEEEccCccceeecCCCCCCCCc-eeEEEeccCCCCCCeEEEEEEe----cCeEEEEEcCCC-ceeeeccCCCceee
Q 016751 132 RSLIYLWNPLIKKYMTLPRPSLNPRY-LGFGVNSVSGHLDDFKVVTISV----NADAEVYSLRSN-SWKNIAYGFPRSIE 205 (383)
Q Consensus 132 ~~~~~v~NP~t~~~~~LP~~~~~~~~-~~~g~d~~~~~~~~ykVv~~~~----~~~~~vyss~t~-~W~~~~~~~p~~~~ 205 (383)
...++++|..+++...+......... ..+.+.|. +.+-++.... ...+.+++..++ ..+.+.........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD----ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT----SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECC----CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 35799999999887766543222122 34555553 2333322221 247888888887 67655411110000
Q ss_pred -eccCcccceeEE--CceEEEEEeeccCCCCCCCcEEEEEECCCCeeeEeCCCCCCCCCCCceE-EEEe-CC-eEEEEEe
Q 016751 206 -INRSHINSSVFL--NGSVHWCARFSCYHDNSCPWLIVSFDFAKEIFQTVMMPYDLSTDDADKY-LNVF-DG-YLCVFAT 279 (383)
Q Consensus 206 -~~~~~~~~~v~~--~G~lYw~~~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~-l~~~-~g-~L~~v~~ 279 (383)
..... ...- +|.+.+.+... ....|..+|...+....+... .. .... ++.. +| .|++...
T Consensus 310 ~~~~~~---~~sp~~dg~~l~~~~~~------g~~~l~~~~~~~~~~~~l~~~-~~----~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 310 EPLHPL---TFLPGSNNQFIWQSRRD------GWNHLYLYDTTGRLIRQVTKG-EW----EVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp CCCSCC---EECTTCSSEEEEEECTT------SSCEEEEEETTSCEEEECCCS-SS----CEEEEEEECTTSSEEEEEES
T ss_pred CccCCc---eeecCCCCEEEEEEccC------CccEEEEEECCCCEEEecCCC-Ce----EEEeeeEEcCCCCEEEEEec
Confidence 00110 2222 78876655432 345788888777666655322 11 1111 3333 34 4555543
Q ss_pred cCCCCccEEEEEEeccCCCCCCeEEEEEecCCCceeEEEEEeeCCcEEEEEEeeCCc--eEEEEEeCCCCe
Q 016751 280 IPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQRIWWPLGFTERGKIFIRGECRHGG--YGLLVYNPHSDT 348 (383)
Q Consensus 280 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~~~yd~~t~~ 348 (383)
.+. .....||.++... .... .+.... ....+.+..+|+.++.. ..... ..++.+|.++++
T Consensus 376 ~~~--~~~~~l~~~d~~~--~~~~---~l~~~~-~~~~~~~spdg~~l~~~-~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 376 EAS--PLERHFYCIDIKG--GKTK---DLTPES-GMHRTQLSPDGSAIIDI-FQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSC--TTCBEEEEEETTC--CCCE---ESCCSS-SEEEEEECTTSSEEEEE-EECSSCSCEEEEEESSSCE
T ss_pred CCC--CceEEEEEEEcCC--CCce---eccCCC-ceEEEEECCCCCEEEEE-ecCCCCCcEEEEEECCCCe
Confidence 322 1246777776432 2222 232222 23445666677544431 21111 148999998887
No 266
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=20.06 E-value=6e+02 Score=24.55 Aligned_cols=72 Identities=14% Similarity=0.004 Sum_probs=41.3
Q ss_pred EEEccCceEEEeecCCCCceEEEEccCcc---ceeecCCCCCCCCceeEEEeccCCCCCCeEEEEEEecCeEEEEEcCCC
Q 016751 115 VVGSCNGVLCFCSNGSDRSLIYLWNPLIK---KYMTLPRPSLNPRYLGFGVNSVSGHLDDFKVVTISVNADAEVYSLRSN 191 (383)
Q Consensus 115 ~~~s~~Gll~~~~~~~~~~~~~v~NP~t~---~~~~LP~~~~~~~~~~~g~d~~~~~~~~ykVv~~~~~~~~~vyss~t~ 191 (383)
+.-|-+|-.++... ...++++|..++ +...+..... ....+.+.|. + .+ ++... ...+.+++..++
T Consensus 114 ~~~SpDg~~l~~~~---~~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SPD---G-~~-la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 114 YQWSPDAQRLLFPL---GGELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSPK---G-GF-VSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp CEECTTSSEEEEEE---TTEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECTT---S-SE-EEEEE-TTEEEEEETTTT
T ss_pred eEECCCCCEEEEEe---CCcEEEEECCCCCcceEEEcccCCc--ccccccCCCC---C-CE-EEEEe-CCcEEEEecCCC
Confidence 34455665433331 378999999988 6655544321 1234455554 2 22 33333 458899999888
Q ss_pred ceeeec
Q 016751 192 SWKNIA 197 (383)
Q Consensus 192 ~W~~~~ 197 (383)
..+.+.
T Consensus 183 ~~~~~~ 188 (741)
T 2ecf_A 183 RQMQLT 188 (741)
T ss_dssp EEEECC
T ss_pred CEEEec
Confidence 766554
No 267
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=20.05 E-value=4.1e+02 Score=23.79 Aligned_cols=34 Identities=24% Similarity=0.503 Sum_probs=27.2
Q ss_pred CeEEEEEecCCCCccEEEEEEeccCCCCCCeEEEEEecCCC
Q 016751 272 GYLCVFATIPNNTFRSYELWVMKEYGLTESWTKLYTIEKPQ 312 (383)
Q Consensus 272 g~L~~v~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 312 (383)
..+|++...+. .+.+|...+ ..+|+++++.....
T Consensus 53 ~~~~~~~~~~~----~v~lw~~~~---~~~~~~~~~~~~~~ 86 (356)
T 2w18_A 53 KEPCIITACED----VVSLWKALD---AWQWEKLYTWHFAE 86 (356)
T ss_dssp CEEEEEEEESS----EEEEEEESS---SSBEEEEEEEECCS
T ss_pred CccEEEEeccc----eEEEcccCC---CccceeeEEEeccC
Confidence 47899888774 999999987 36799999886543
No 268
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=20.05 E-value=1.1e+02 Score=20.16 Aligned_cols=15 Identities=20% Similarity=0.275 Sum_probs=13.4
Q ss_pred EEEEEeCCCCeEEEE
Q 016751 338 GLLVYNPHSDTFKCI 352 (383)
Q Consensus 338 ~~~~yd~~t~~~~~v 352 (383)
+++.||++|++++-+
T Consensus 41 KIykyde~tNeI~Lk 55 (72)
T 3kvp_A 41 KIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCeEEEE
Confidence 799999999998765
Done!