Query 016752
Match_columns 383
No_of_seqs 150 out of 1577
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 03:12:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016752.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016752hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.1 1.2E-08 4.1E-13 92.7 23.4 223 120-366 68-302 (315)
2 2woz_A Kelch repeat and BTB do 99.1 2.3E-08 7.9E-13 90.9 24.0 203 121-345 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.1 6.3E-08 2.2E-12 87.4 26.1 202 119-346 70-279 (306)
4 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 1.5E-11 5.2E-16 80.2 0.6 42 1-42 9-50 (53)
5 3ii7_A Kelch-like protein 7; p 99.1 3.7E-08 1.3E-12 88.9 22.9 224 118-370 23-256 (306)
6 2vpj_A Kelch-like protein 12; 99.1 7.5E-08 2.6E-12 86.6 24.4 200 119-346 78-285 (301)
7 2xn4_A Kelch-like protein 2; s 99.1 6.5E-08 2.2E-12 87.1 23.9 201 119-346 77-283 (302)
8 2e31_A FBS1, F-box only protei 99.1 3.5E-11 1.2E-15 106.5 2.0 48 1-48 51-99 (297)
9 1zgk_A Kelch-like ECH-associat 99.0 8.9E-08 3E-12 86.6 23.6 200 119-346 90-294 (308)
10 3v7d_B Cell division control p 99.0 5.6E-07 1.9E-11 85.7 28.8 45 2-46 16-61 (464)
11 2vpj_A Kelch-like protein 12; 98.9 5E-07 1.7E-11 81.2 25.2 224 119-370 31-262 (301)
12 2ovr_B FBW7, F-BOX/WD repeat p 98.9 2E-06 6.9E-11 81.5 30.8 286 1-342 19-312 (445)
13 2uvk_A YJHT; unknown function, 98.9 9.1E-08 3.1E-12 88.3 20.4 245 109-371 19-326 (357)
14 1zgk_A Kelch-like ECH-associat 98.9 1.5E-07 5E-12 85.2 21.0 225 119-370 39-271 (308)
15 2xn4_A Kelch-like protein 2; s 98.9 3.7E-07 1.3E-11 82.1 23.3 224 119-370 30-260 (302)
16 4asc_A Kelch repeat and BTB do 98.8 7.3E-07 2.5E-11 80.7 22.0 203 119-346 13-228 (315)
17 1p22_A F-BOX/WD-repeat protein 98.8 1.4E-06 4.9E-11 82.4 23.9 290 2-342 12-329 (435)
18 2uvk_A YJHT; unknown function, 98.8 6.5E-07 2.2E-11 82.5 20.5 202 119-342 86-346 (357)
19 2zwa_A Leucine carboxyl methyl 98.7 9.6E-07 3.3E-11 88.9 19.6 207 119-348 412-644 (695)
20 2woz_A Kelch repeat and BTB do 98.5 2.4E-06 8.4E-11 77.3 15.9 153 119-289 127-293 (318)
21 3l2o_B F-box only protein 4; s 98.0 6.2E-07 2.1E-11 78.4 -0.6 47 2-48 6-52 (312)
22 1k3i_A Galactose oxidase precu 98.0 0.00013 4.4E-09 73.0 15.4 224 107-346 251-504 (656)
23 2zwa_A Leucine carboxyl methyl 97.9 0.00038 1.3E-08 70.0 17.8 185 175-371 410-617 (695)
24 1k3i_A Galactose oxidase precu 97.9 5E-05 1.7E-09 75.9 11.1 206 120-346 220-448 (656)
25 2ast_B S-phase kinase-associat 97.4 3.1E-05 1.1E-09 70.5 0.3 39 1-39 9-47 (336)
26 2p1m_B Transport inhibitor res 96.8 0.0002 6.7E-09 70.5 -0.4 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.1 0.00081 2.8E-08 66.0 -0.3 33 2-34 14-47 (592)
28 3jrp_A Fusion protein of prote 95.9 0.84 2.9E-05 40.8 18.9 192 111-339 25-241 (379)
29 3mbr_X Glutamine cyclotransfer 95.2 1.2 4.2E-05 37.9 16.2 114 208-348 28-143 (243)
30 3ei3_B DNA damage-binding prot 95.1 1.9 6.4E-05 38.9 22.7 191 111-342 88-286 (383)
31 3hfq_A Uncharacterized protein 94.7 1.9 6.5E-05 38.2 17.2 114 210-342 50-176 (347)
32 4e54_B DNA damage-binding prot 94.6 0.7 2.4E-05 42.9 14.5 195 109-342 131-331 (435)
33 3jro_A Fusion protein of prote 94.0 1.6 5.4E-05 44.0 16.3 192 111-339 23-239 (753)
34 3nol_A Glutamine cyclotransfer 94.0 2 6.9E-05 37.0 14.6 114 208-348 50-165 (262)
35 3jrp_A Fusion protein of prote 93.6 3.6 0.00012 36.4 16.8 198 110-342 70-292 (379)
36 2iwa_A Glutamine cyclotransfer 93.1 2.1 7.1E-05 37.1 13.3 112 211-348 32-145 (266)
37 1ri6_A Putative isomerase YBHE 92.7 4.7 0.00016 35.1 17.7 140 177-342 60-215 (343)
38 3nok_A Glutaminyl cyclase; bet 92.4 2.6 8.7E-05 36.4 12.8 109 210-348 64-174 (268)
39 4gqb_B Methylosome protein 50; 92.3 5.8 0.0002 35.4 17.9 210 107-360 91-307 (344)
40 4aez_A CDC20, WD repeat-contai 92.3 6.3 0.00021 35.7 19.6 191 109-342 103-297 (401)
41 4gga_A P55CDC, cell division c 91.6 8 0.00027 35.3 22.6 200 102-342 108-314 (420)
42 3u4y_A Uncharacterized protein 91.6 6.5 0.00022 34.2 19.4 179 117-341 18-210 (331)
43 3dsm_A Uncharacterized protein 91.5 7 0.00024 34.5 22.2 205 109-347 2-221 (328)
44 3dwl_C Actin-related protein 2 91.0 2.6 9E-05 37.6 12.3 186 117-341 31-239 (377)
45 3sjl_D Methylamine dehydrogena 90.5 3.9 0.00014 37.4 12.8 123 210-352 237-377 (386)
46 3m0c_C LDL receptor, low-densi 90.3 17 0.00056 36.8 24.6 178 150-366 474-658 (791)
47 4g56_B MGC81050 protein; prote 90.1 10 0.00034 33.9 16.6 195 108-342 104-305 (357)
48 1ri6_A Putative isomerase YBHE 89.8 9.4 0.00032 33.1 19.2 99 228-342 152-268 (343)
49 3dsm_A Uncharacterized protein 89.5 10 0.00036 33.3 20.2 192 109-342 53-257 (328)
50 3bws_A Protein LP49; two-domai 89.1 13 0.00044 33.8 15.6 112 210-342 133-247 (433)
51 3scy_A Hypothetical bacterial 88.0 13 0.00046 32.7 16.2 102 228-345 234-345 (361)
52 3q7m_A Lipoprotein YFGL, BAMB; 87.9 14 0.00049 32.9 17.6 189 105-342 99-300 (376)
53 1l0q_A Surface layer protein; 87.6 15 0.00051 32.7 23.5 178 117-342 10-193 (391)
54 3v9f_A Two-component system se 87.6 25 0.00085 35.2 21.3 194 109-346 417-618 (781)
55 3vgz_A Uncharacterized protein 87.5 14 0.00047 32.2 25.5 206 105-345 96-310 (353)
56 1k8k_C P40, ARP2/3 complex 41 87.2 15 0.00051 32.3 22.8 192 111-342 22-237 (372)
57 2z2n_A Virginiamycin B lyase; 86.8 13 0.00046 31.4 20.4 189 107-342 107-299 (299)
58 1gxr_A ESG1, transducin-like e 86.1 16 0.00053 31.5 22.6 194 107-342 60-259 (337)
59 2pm9_A Protein WEB1, protein t 86.1 18 0.0006 32.4 14.4 198 110-342 127-341 (416)
60 3v65_B Low-density lipoprotein 85.1 22 0.00075 32.2 22.1 213 106-366 124-344 (386)
61 3fm0_A Protein CIAO1; WDR39,SG 84.7 20 0.00069 31.5 19.1 188 111-336 30-223 (345)
62 2hqs_A Protein TOLB; TOLB, PAL 84.7 23 0.0008 32.2 21.6 185 119-345 203-393 (415)
63 2aq5_A Coronin-1A; WD40 repeat 84.4 23 0.00078 31.8 23.8 202 110-346 95-308 (402)
64 3zwl_B Eukaryotic translation 84.3 20 0.00069 31.2 21.1 68 262-342 186-253 (369)
65 3hfq_A Uncharacterized protein 84.3 20 0.0007 31.3 27.4 168 149-347 143-327 (347)
66 1l0q_A Surface layer protein; 83.1 25 0.00084 31.2 22.5 191 109-345 85-282 (391)
67 2mad_H Methylamine dehydrogena 82.6 27 0.00093 31.4 15.4 55 277-342 298-354 (373)
68 2ojh_A Uncharacterized protein 82.4 20 0.0007 29.8 19.9 210 107-345 50-264 (297)
69 1npe_A Nidogen, entactin; glyc 82.3 21 0.00073 30.0 23.7 198 105-346 43-246 (267)
70 1n7d_A LDL receptor, low-densi 82.3 6.4 0.00022 39.2 10.1 113 205-342 499-618 (699)
71 3p5b_L Low density lipoprotein 82.2 30 0.001 31.6 22.7 179 149-366 161-346 (400)
72 4a11_B DNA excision repair pro 82.2 26 0.0009 31.0 18.3 199 111-342 58-280 (408)
73 1r5m_A SIR4-interacting protei 82.0 27 0.00094 31.0 17.7 186 108-338 216-425 (425)
74 1k8k_C P40, ARP2/3 complex 41 81.4 14 0.00047 32.5 11.3 68 262-342 19-87 (372)
75 1yfq_A Cell cycle arrest prote 80.0 28 0.00097 29.9 21.3 190 111-342 71-286 (342)
76 3g4e_A Regucalcin; six bladed 79.5 29 0.00099 29.7 21.5 202 106-347 21-238 (297)
77 1npe_A Nidogen, entactin; glyc 78.7 28 0.00097 29.2 12.3 160 149-342 38-202 (267)
78 1q7f_A NHL, brain tumor CG1071 78.6 29 0.00099 29.2 23.1 203 107-347 38-246 (286)
79 2z3z_A Dipeptidyl aminopeptida 78.6 52 0.0018 32.1 21.5 195 119-342 235-439 (706)
80 3bg1_A Protein SEC13 homolog; 78.3 33 0.0011 29.7 14.8 52 276-338 190-247 (316)
81 2bkl_A Prolyl endopeptidase; m 77.8 56 0.0019 32.1 22.4 195 120-346 203-404 (695)
82 1p22_A F-BOX/WD-repeat protein 77.5 42 0.0014 30.5 19.8 188 104-340 178-367 (435)
83 3q7m_A Lipoprotein YFGL, BAMB; 77.0 39 0.0013 29.9 22.1 136 177-347 198-346 (376)
84 1nir_A Nitrite reductase; hemo 76.5 54 0.0018 31.2 19.4 198 108-346 147-363 (543)
85 3v64_C Agrin; beta propeller, 76.0 42 0.0014 29.8 22.9 214 106-365 81-300 (349)
86 3dwl_C Actin-related protein 2 75.7 6.4 0.00022 35.0 7.2 139 177-339 33-178 (377)
87 3i2n_A WD repeat-containing pr 75.6 39 0.0013 29.2 15.8 185 118-340 43-245 (357)
88 4aow_A Guanine nucleotide-bind 75.5 38 0.0013 29.0 21.2 92 228-340 238-339 (340)
89 3mmy_A MRNA export factor; mRN 75.2 40 0.0014 29.1 23.0 193 109-342 97-308 (368)
90 3e5z_A Putative gluconolactona 74.9 38 0.0013 28.7 23.0 204 104-348 34-255 (296)
91 3iz6_a 40S ribosomal protein R 74.9 46 0.0016 29.6 19.2 101 228-342 181-284 (380)
92 3hrp_A Uncharacterized protein 74.3 52 0.0018 30.0 20.7 197 108-345 140-360 (409)
93 3bws_A Protein LP49; two-domai 73.9 50 0.0017 29.6 22.0 202 107-342 178-394 (433)
94 3scy_A Hypothetical bacterial 73.7 46 0.0016 29.1 16.3 112 210-339 60-187 (361)
95 3hrp_A Uncharacterized protein 73.0 24 0.00081 32.3 10.5 108 210-345 141-255 (409)
96 1rwi_B Serine/threonine-protei 72.5 40 0.0014 27.9 16.2 189 107-342 32-226 (270)
97 3e5z_A Putative gluconolactona 71.4 46 0.0016 28.2 17.7 195 106-342 76-290 (296)
98 1ijq_A LDL receptor, low-densi 71.1 52 0.0018 28.6 24.1 217 105-366 37-264 (316)
99 1gxr_A ESG1, transducin-like e 70.0 51 0.0017 28.0 24.4 187 109-342 108-300 (337)
100 3sfz_A APAF-1, apoptotic pepti 69.6 1.2E+02 0.004 32.0 23.5 190 107-342 624-832 (1249)
101 2vdu_B TRNA (guanine-N(7)-)-me 69.5 67 0.0023 29.2 22.8 69 263-346 210-279 (450)
102 4a0p_A LRP6, LRP-6, low-densit 69.2 88 0.003 30.5 28.6 213 105-365 44-262 (628)
103 1rwi_B Serine/threonine-protei 68.6 49 0.0017 27.3 17.8 188 108-341 76-267 (270)
104 4a11_B DNA excision repair pro 68.5 62 0.0021 28.4 18.9 54 276-342 315-369 (408)
105 2z3z_A Dipeptidyl aminopeptida 67.4 95 0.0032 30.2 20.7 157 176-345 234-397 (706)
106 3jro_A Fusion protein of prote 67.2 1E+02 0.0035 30.5 15.5 96 228-340 32-134 (753)
107 3mkq_A Coatomer beta'-subunit; 67.0 1E+02 0.0035 30.4 25.7 188 109-342 67-263 (814)
108 3mmy_A MRNA export factor; mRN 66.4 61 0.0021 27.9 11.5 69 263-345 54-123 (368)
109 2xyi_A Probable histone-bindin 66.0 77 0.0026 28.7 12.7 93 228-338 255-353 (430)
110 1got_B GT-beta; complex (GTP-b 65.2 69 0.0024 27.8 23.3 188 109-342 66-261 (340)
111 1pby_B Quinohemoprotein amine 65.1 42 0.0014 28.6 10.1 99 228-348 220-320 (337)
112 3c75_H MADH, methylamine dehyd 65.0 86 0.003 28.9 12.7 72 262-344 330-408 (426)
113 4aez_A CDC20, WD repeat-contai 65.0 76 0.0026 28.2 24.5 195 111-351 148-349 (401)
114 3fvz_A Peptidyl-glycine alpha- 64.9 69 0.0024 27.7 18.2 201 108-338 100-322 (329)
115 3nol_A Glutamine cyclotransfer 64.8 66 0.0023 27.4 14.1 142 176-349 64-212 (262)
116 3azo_A Aminopeptidase; POP fam 64.8 1E+02 0.0035 29.6 20.2 195 119-345 161-375 (662)
117 4g56_B MGC81050 protein; prote 63.4 78 0.0027 27.8 16.8 188 107-339 148-344 (357)
118 1q7f_A NHL, brain tumor CG1071 63.3 66 0.0022 26.9 21.7 190 107-338 86-280 (286)
119 2ynn_A Coatomer subunit beta'; 62.8 71 0.0024 27.2 19.4 199 105-344 63-264 (304)
120 3mkq_A Coatomer beta'-subunit; 61.6 1.3E+02 0.0044 29.7 23.0 186 111-342 27-221 (814)
121 3f3f_A Nucleoporin SEH1; struc 61.1 75 0.0026 26.9 13.6 66 262-340 70-145 (351)
122 4a2l_A BT_4663, two-component 61.0 1.4E+02 0.0046 29.8 23.3 201 108-345 272-486 (795)
123 3fm0_A Protein CIAO1; WDR39,SG 61.0 84 0.0029 27.4 20.5 143 176-342 37-185 (345)
124 3no2_A Uncharacterized protein 60.9 77 0.0026 26.9 18.5 191 109-345 5-202 (276)
125 1yr2_A Prolyl oligopeptidase; 60.8 1.3E+02 0.0045 29.6 22.3 168 151-345 272-447 (741)
126 4ery_A WD repeat-containing pr 60.6 77 0.0026 26.8 23.4 185 111-342 37-227 (312)
127 2pm7_B Protein transport prote 59.6 80 0.0027 26.7 17.8 66 264-342 220-290 (297)
128 3no2_A Uncharacterized protein 59.2 82 0.0028 26.7 14.8 140 176-347 14-163 (276)
129 3u4y_A Uncharacterized protein 58.8 85 0.0029 26.7 20.9 185 120-345 109-310 (331)
130 4a2l_A BT_4663, two-component 58.7 1.5E+02 0.0051 29.5 23.0 203 108-345 224-442 (795)
131 3tc9_A Hypothetical hydrolase; 57.7 1.1E+02 0.0039 27.9 14.0 114 205-342 140-261 (430)
132 2hes_X YDR267CP; beta-propelle 57.2 95 0.0032 26.8 13.3 50 229-283 273-327 (330)
133 4gga_A P55CDC, cell division c 57.1 1.1E+02 0.0037 27.4 12.8 87 239-342 94-182 (420)
134 2pm7_B Protein transport prote 57.0 89 0.003 26.4 18.5 65 263-339 170-239 (297)
135 3dr2_A Exported gluconolactona 56.5 93 0.0032 26.5 19.5 199 111-348 59-276 (305)
136 4aow_A Guanine nucleotide-bind 56.1 94 0.0032 26.4 17.7 97 229-342 152-250 (340)
137 2dg1_A DRP35, lactonase; beta 55.6 98 0.0034 26.5 13.9 119 210-345 55-177 (333)
138 2ovr_B FBW7, F-BOX/WD repeat p 55.4 1.2E+02 0.004 27.4 25.4 116 206-339 324-443 (445)
139 1ijq_A LDL receptor, low-densi 55.3 1E+02 0.0035 26.6 20.4 179 119-342 10-199 (316)
140 1jmx_B Amine dehydrogenase; ox 54.6 1E+02 0.0034 26.3 11.0 99 229-349 235-336 (349)
141 1jmx_B Amine dehydrogenase; ox 54.6 81 0.0028 26.9 10.1 72 262-346 10-82 (349)
142 3sov_A LRP-6, low-density lipo 54.6 1.1E+02 0.0037 26.7 23.9 178 150-366 82-264 (318)
143 3nok_A Glutaminyl cyclase; bet 54.4 1E+02 0.0035 26.3 14.7 113 208-349 103-221 (268)
144 2ecf_A Dipeptidyl peptidase IV 54.4 1.6E+02 0.0056 28.6 19.5 193 120-342 264-463 (741)
145 2oiz_A Aromatic amine dehydrog 54.0 1.2E+02 0.004 26.8 12.7 67 262-342 265-338 (361)
146 1ddw_A GLGF-domain protein hom 53.4 28 0.00095 25.8 5.5 40 119-167 11-51 (120)
147 3mbr_X Glutamine cyclotransfer 53.2 1E+02 0.0035 25.9 18.2 146 175-349 41-190 (243)
148 3bg1_A Protein SEC13 homolog; 53.2 1.1E+02 0.0037 26.2 16.8 68 264-346 229-301 (316)
149 3dm0_A Maltose-binding peripla 53.1 1.7E+02 0.0058 28.4 21.6 181 117-337 492-692 (694)
150 3v65_B Low-density lipoprotein 52.8 1.3E+02 0.0044 27.0 23.5 186 109-342 87-281 (386)
151 4e54_B DNA damage-binding prot 52.4 1.3E+02 0.0045 27.0 11.5 97 229-342 144-244 (435)
152 1kb0_A Quinohemoprotein alcoho 52.0 1.8E+02 0.0062 28.5 16.8 122 109-242 77-207 (677)
153 3lrv_A PRE-mRNA-splicing facto 51.8 1.2E+02 0.004 26.2 18.7 197 103-342 88-298 (343)
154 2dg1_A DRP35, lactonase; beta 51.3 1.2E+02 0.0039 26.0 22.1 207 108-347 54-271 (333)
155 4hw6_A Hypothetical protein, I 50.7 1.5E+02 0.0051 27.1 13.6 113 205-341 142-262 (433)
156 3vgz_A Uncharacterized protein 50.7 1.2E+02 0.004 25.9 24.6 190 118-346 68-270 (353)
157 2hqs_A Protein TOLB; TOLB, PAL 50.3 1.4E+02 0.0049 26.8 22.9 186 119-345 159-350 (415)
158 3iuj_A Prolyl endopeptidase; h 49.3 2E+02 0.0067 28.1 21.9 169 151-346 238-412 (693)
159 3o4h_A Acylamino-acid-releasin 49.3 1.7E+02 0.006 27.5 16.6 194 109-342 122-318 (582)
160 2ojh_A Uncharacterized protein 49.3 1.1E+02 0.0037 25.1 20.8 188 118-345 21-212 (297)
161 4gqb_B Methylosome protein 50; 49.2 1.4E+02 0.0046 26.2 13.1 57 276-342 104-162 (344)
162 3vl1_A 26S proteasome regulato 49.1 1.4E+02 0.0048 26.3 28.7 188 109-340 109-324 (420)
163 3ei3_B DNA damage-binding prot 49.0 1.4E+02 0.0046 26.1 15.1 98 229-345 98-200 (383)
164 3k26_A Polycomb protein EED; W 49.0 1.3E+02 0.0043 25.8 21.7 64 263-338 299-366 (366)
165 3p5b_L Low density lipoprotein 48.9 1.5E+02 0.0052 26.7 19.9 189 110-345 84-283 (400)
166 1evh_A WH1 domain, protein (ME 48.6 29 0.001 25.3 4.9 42 119-167 11-52 (112)
167 3iz6_a 40S ribosomal protein R 48.6 1.4E+02 0.0048 26.2 20.5 194 111-340 172-377 (380)
168 1kb0_A Quinohemoprotein alcoho 48.3 1.3E+02 0.0045 29.4 11.3 30 205-241 72-103 (677)
169 3ow8_A WD repeat-containing pr 46.7 1.4E+02 0.0048 25.6 22.8 184 111-342 94-283 (321)
170 3g4e_A Regucalcin; six bladed 46.6 1.3E+02 0.0045 25.4 20.5 157 148-341 14-185 (297)
171 3dr2_A Exported gluconolactona 46.3 1.2E+02 0.0042 25.7 9.7 119 210-345 55-184 (305)
172 3vl1_A 26S proteasome regulato 46.3 1.6E+02 0.0053 26.0 19.9 94 228-338 314-419 (420)
173 1nir_A Nitrite reductase; hemo 45.7 2E+02 0.0068 27.2 14.7 112 210-347 148-266 (543)
174 2pm9_A Protein WEB1, protein t 45.4 1.6E+02 0.0054 25.9 16.4 65 263-339 178-250 (416)
175 4ggc_A P55CDC, cell division c 44.6 1.4E+02 0.0047 25.0 23.8 67 107-188 34-100 (318)
176 2ad6_A Methanol dehydrogenase 44.6 2E+02 0.0069 27.4 11.7 31 204-241 56-90 (571)
177 3s94_A LRP-6, low-density lipo 43.3 2.4E+02 0.0081 27.3 22.8 214 105-363 356-573 (619)
178 4ery_A WD repeat-containing pr 43.3 1.5E+02 0.0051 24.9 24.0 186 111-342 79-272 (312)
179 1sq9_A Antiviral protein SKI8; 43.1 1.7E+02 0.0057 25.5 19.7 98 228-340 259-397 (397)
180 2ecf_A Dipeptidyl peptidase IV 42.8 2.4E+02 0.0084 27.3 22.2 68 107-193 117-188 (741)
181 1w6s_A Methanol dehydrogenase 42.3 2E+02 0.007 27.7 11.3 107 205-342 57-195 (599)
182 2aq5_A Coronin-1A; WD40 repeat 42.2 1.8E+02 0.0061 25.6 21.7 201 106-340 42-256 (402)
183 2qe8_A Uncharacterized protein 41.3 1.8E+02 0.006 25.3 13.7 76 206-283 71-153 (343)
184 2kwv_A RAD30 homolog B, DNA po 41.0 14 0.00047 22.0 1.6 16 2-17 22-37 (48)
185 2iwa_A Glutamine cyclotransfer 40.2 1.7E+02 0.0059 24.8 21.2 191 109-340 31-239 (266)
186 1r5m_A SIR4-interacting protei 39.8 1.9E+02 0.0065 25.2 24.9 93 228-342 228-323 (425)
187 1kv9_A Type II quinohemoprotei 39.7 1.6E+02 0.0054 28.8 10.3 30 205-241 61-92 (668)
188 3lrv_A PRE-mRNA-splicing facto 39.2 1.8E+02 0.0063 24.9 14.8 67 262-342 138-205 (343)
189 1qks_A Cytochrome CD1 nitrite 39.0 2.6E+02 0.009 26.6 14.9 101 228-348 178-285 (567)
190 1mda_H Methylamine dehydrogena 38.8 1E+02 0.0036 27.6 8.1 56 281-347 298-355 (368)
191 4h5i_A Guanine nucleotide-exch 38.6 2E+02 0.0069 25.2 18.7 62 210-283 280-342 (365)
192 3v64_C Agrin; beta propeller, 38.0 2.1E+02 0.0071 25.1 24.3 188 109-342 44-238 (349)
193 2ghs_A AGR_C_1268P; regucalcin 37.6 2E+02 0.0067 24.7 14.4 110 210-342 60-172 (326)
194 2qc5_A Streptogramin B lactona 36.6 1.8E+02 0.0061 24.0 21.7 188 107-342 28-221 (300)
195 3fvz_A Peptidyl-glycine alpha- 36.5 2E+02 0.007 24.6 17.4 119 210-345 101-234 (329)
196 3sov_A LRP-6, low-density lipo 36.3 2.1E+02 0.0072 24.7 14.2 106 210-342 90-201 (318)
197 1egx_A VAsp, vasodilator-stimu 35.5 60 0.002 23.7 4.9 42 120-167 12-53 (115)
198 1sq9_A Antiviral protein SKI8; 35.5 2.2E+02 0.0075 24.7 21.6 68 262-342 197-271 (397)
199 2xyi_A Probable histone-bindin 35.5 2.4E+02 0.0083 25.2 16.6 192 111-342 196-414 (430)
200 3odt_A Protein DOA1; ubiquitin 35.1 1.9E+02 0.0065 23.9 21.1 92 228-342 206-300 (313)
201 3k26_A Polycomb protein EED; W 34.7 2.1E+02 0.0072 24.3 21.4 63 111-188 87-149 (366)
202 1yfq_A Cell cycle arrest prote 33.9 2.1E+02 0.0073 24.1 17.6 183 111-339 25-226 (342)
203 2qc5_A Streptogramin B lactona 33.8 2E+02 0.0068 23.7 21.0 194 107-347 70-267 (300)
204 3odt_A Protein DOA1; ubiquitin 33.8 2E+02 0.0069 23.7 24.2 190 108-342 28-218 (313)
205 2oaj_A Protein SNI1; WD40 repe 33.6 3.9E+02 0.013 27.1 20.6 189 111-342 31-246 (902)
206 1yiq_A Quinohemoprotein alcoho 32.3 2.5E+02 0.0086 27.5 10.4 30 205-241 65-96 (689)
207 3v7d_B Cell division control p 32.3 2.8E+02 0.0094 24.9 27.8 193 107-342 171-385 (464)
208 2fp8_A Strictosidine synthase; 32.0 2.4E+02 0.0081 24.0 14.0 51 228-283 261-312 (322)
209 2qe8_A Uncharacterized protein 31.2 2.6E+02 0.0088 24.2 9.6 120 210-345 27-160 (343)
210 3gre_A Serine/threonine-protei 31.1 2.2E+02 0.0075 25.3 9.3 68 262-342 181-249 (437)
211 2xzh_A Clathrin heavy chain 1; 31.1 2.9E+02 0.0098 24.7 10.6 43 298-350 260-302 (365)
212 4hvt_A Ritya.17583.B, post-pro 30.0 4.1E+02 0.014 26.2 11.9 126 208-345 297-435 (711)
213 3v9f_A Two-component system se 30.0 4.1E+02 0.014 26.1 20.9 200 108-345 322-530 (781)
214 2z2n_A Virginiamycin B lyase; 29.9 2.3E+02 0.0079 23.2 22.8 194 107-347 65-262 (299)
215 2hes_X YDR267CP; beta-propelle 29.3 2.7E+02 0.0091 23.7 19.9 69 259-339 257-329 (330)
216 1i2h_A PSD-ZIP45(homer-1C/VESL 28.7 1.2E+02 0.004 23.9 5.7 39 120-167 17-56 (168)
217 3i2n_A WD repeat-containing pr 28.4 2.7E+02 0.0092 23.5 22.0 106 210-339 179-292 (357)
218 2p4o_A Hypothetical protein; p 28.4 2.7E+02 0.0092 23.5 12.7 104 210-340 42-149 (306)
219 1pgu_A Actin interacting prote 27.7 3.7E+02 0.013 24.9 20.3 187 107-339 415-615 (615)
220 1n7d_A LDL receptor, low-densi 27.0 3E+02 0.01 27.0 9.9 57 176-239 561-617 (699)
221 2jp2_A Spred-2, sprouty-relate 26.5 1.1E+02 0.0039 22.6 5.1 42 120-167 21-65 (126)
222 4h5i_A Guanine nucleotide-exch 25.9 3.3E+02 0.011 23.7 17.7 140 177-342 157-304 (365)
223 1pby_B Quinohemoprotein amine 25.5 2.9E+02 0.01 23.0 9.3 61 276-347 12-74 (337)
224 1xod_A Spred1; sprouty, EVH1, 25.5 98 0.0033 22.7 4.5 42 120-167 12-56 (118)
225 1qks_A Cytochrome CD1 nitrite 25.5 4.4E+02 0.015 25.0 22.5 199 109-347 166-382 (567)
226 2vdu_B TRNA (guanine-N(7)-)-me 25.3 3.7E+02 0.013 24.0 23.1 93 229-336 222-337 (450)
227 3ju4_A Endo-N-acetylneuraminid 25.1 3.7E+02 0.013 24.7 8.8 61 208-271 346-406 (670)
228 2pbi_B Guanine nucleotide-bind 25.1 3.3E+02 0.011 23.5 23.7 182 111-335 168-354 (354)
229 2be1_A Serine/threonine-protei 24.2 1.5E+02 0.0052 26.2 6.4 111 109-239 10-133 (339)
230 3f3f_A Nucleoporin SEH1; struc 23.9 3.1E+02 0.011 22.7 21.9 31 300-340 309-339 (351)
231 1erj_A Transcriptional repress 23.6 3.7E+02 0.013 23.5 26.8 195 107-342 132-345 (393)
232 1mda_H Methylamine dehydrogena 23.6 1.9E+02 0.0067 25.8 7.2 67 278-348 47-115 (368)
233 2ece_A 462AA long hypothetical 23.5 4.1E+02 0.014 24.6 9.3 100 227-337 228-351 (462)
234 3m0c_C LDL receptor, low-densi 22.5 5.9E+02 0.02 25.4 23.4 115 205-345 474-595 (791)
235 3sjl_D Methylamine dehydrogena 22.5 2.7E+02 0.0093 25.1 7.9 65 278-347 60-127 (386)
236 1pjx_A Dfpase, DIISOPROPYLFLUO 22.5 3.3E+02 0.011 22.5 23.9 192 117-341 44-259 (314)
237 2ad6_A Methanol dehydrogenase 22.3 2.5E+02 0.0085 26.8 8.1 121 109-241 62-192 (571)
238 4eqa_C PA1845 protein, putativ 22.3 1.5E+02 0.0052 20.9 4.7 39 305-350 75-113 (153)
239 1bpo_A Protein (clathrin); cla 22.2 4.8E+02 0.017 24.3 11.4 43 298-350 259-301 (494)
240 1kv9_A Type II quinohemoprotei 21.2 5.7E+02 0.019 24.7 18.5 65 177-242 127-195 (668)
241 4gq1_A NUP37; propeller, trans 21.1 4.2E+02 0.014 23.2 11.5 68 262-342 155-222 (393)
242 2oit_A Nucleoporin 214KDA; NH2 20.9 4.2E+02 0.014 23.9 9.1 65 263-342 162-227 (434)
243 2dk7_A Transcription elongatio 20.8 75 0.0026 21.1 2.7 27 111-137 22-48 (73)
244 1yiq_A Quinohemoprotein alcoho 20.4 6E+02 0.021 24.7 19.2 122 109-242 70-200 (689)
245 2ymu_A WD-40 repeat protein; u 20.3 5.1E+02 0.017 23.8 26.8 179 117-345 323-504 (577)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.15 E-value=1.2e-08 Score=92.68 Aligned_cols=223 Identities=11% Similarity=0.058 Sum_probs=132.9
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEee--cCCcccEEEEEEcCCCceEEeccCCC
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVR--ENVEYTEVSVYSLRSNSWRRIRVDFP 197 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~--~~~~~~~~~vyss~~~~Wr~~~~~~p 197 (383)
.++++||.|++|..+|+.+..+.. + .. ..++ + +++.++.... .......+++|+..+++|+.+. .+|
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p 136 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCL--F-GL--GEAL----N-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLP 136 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEES--C-EE--EEET----T-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCS
T ss_pred ceEEecCCCCeEEECCCCCcchhc--e-eE--EEEC----C-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCC
Confidence 388999999999999987754311 1 11 1111 2 5666654321 2334567899999999999987 665
Q ss_pred eeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCC-
Q 016752 198 YYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ- 275 (383)
Q Consensus 198 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~- 275 (383)
.. ......+.++|.+|.+++..........+..||+.+++|+.++ +|.... ....+..+|+|+++.......
T Consensus 137 ~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~ 210 (315)
T 4asc_A 137 YV-VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS-----LFGATVHDGRIIVAAGVTDTGL 210 (315)
T ss_dssp SC-CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEEEEECSSSE
T ss_pred Cc-ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh-----ceEEEEECCEEEEEeccCCCCc
Confidence 43 1223567899999999876332223345999999999999885 443322 224677899999998764432
Q ss_pred cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEe-cc-CC--Cccc-cCCCcEEEEEeCCCCeEEEEEEE
Q 016752 276 PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDK-FK-YG--EEDD-DINRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 276 ~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~-~~-~~--~~~~-~~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
.-.+|+++ ..|.++..++. +.....+.+. + +.|++.- .. .. +.+. ...-..+..||+++++|+ .+ .
T Consensus 211 ~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~-~ 284 (315)
T 4asc_A 211 TSSAEVYSITDNKWAPFEAFPQ--ERSSLSLVSL-V-GTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE-GV-L 284 (315)
T ss_dssp EEEEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE-EE-E
T ss_pred cceEEEEECCCCeEEECCCCCC--cccceeEEEE-C-CEEEEECCccccCcCCccccccccCcEEEecCCCChhh-hh-c
Confidence 33678777 89998765443 1111122222 3 3555541 00 00 0000 001135899999999999 77 2
Q ss_pred eccCCCeeeEEEEEccccc
Q 016752 348 HGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 348 ~~~~~~~~~~~~y~~sl~~ 366 (383)
...... ..+..+...|.-
T Consensus 285 ~~~r~~-~~~~~~~~~l~v 302 (315)
T 4asc_A 285 REIAYA-AGATFLPVRLNV 302 (315)
T ss_dssp SCSSCC-SSCEEEEEEECG
T ss_pred cCCcCc-cceEEeCCEEEE
Confidence 222222 344444444443
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.12 E-value=2.3e-08 Score=90.89 Aligned_cols=203 Identities=12% Similarity=0.164 Sum_probs=125.0
Q ss_pred EEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEee-cCCcccEEEEEEcCCCceEEeccCCCee
Q 016752 121 IAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVR-ENVEYTEVSVYSLRSNSWRRIRVDFPYY 199 (383)
Q Consensus 121 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~-~~~~~~~~~vyss~~~~Wr~~~~~~p~~ 199 (383)
++++||.|++|..+|+.+..+.. + .. ..++ + +++.++.... .......+++|+..+++|+.+. .+|..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~ 148 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCL--F-GL--GEVD----D-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIK 148 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCS--C-EE--EEET----T-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSC
T ss_pred EEEEeCCCCcEEECCCCCccccc--c-ce--EEEC----C-EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCc
Confidence 88999999999999887765321 1 11 1111 2 5666654321 2234567999999999999987 66643
Q ss_pred eecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCC-cE
Q 016752 200 ILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ-PV 277 (383)
Q Consensus 200 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~-~l 277 (383)
. .....+.++|.+|.+++..........+..||+.+++|+.++ +|.... ....+..+|+|+++....... .-
T Consensus 149 r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~~~ 222 (318)
T 2woz_A 149 V-YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS-----MFGVAIHKGKIVIAGGVTEDGLSA 222 (318)
T ss_dssp E-ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEEEEEETTEEEE
T ss_pred c-cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc-----cceEEEECCEEEEEcCcCCCCccc
Confidence 2 223567799999999865322122334999999999999985 443322 124577899999998654321 24
Q ss_pred EEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEe-ccC-CCc--c-ccCCCcEEEEEeCCCCeEEEEE
Q 016752 278 DIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDK-FKY-GEE--D-DDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 278 ~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~-~~~-~~~--~-~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+|+++ .+|.++..++.. .....+.+. + +.|++.- ... ..+ + .......+..||+++++|+ ++
T Consensus 223 ~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~ 293 (318)
T 2woz_A 223 SVEAFDLKTNKWEVMTEFPQE--RSSISLVSL-A-GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA-GM 293 (318)
T ss_dssp EEEEEETTTCCEEECCCCSSC--CBSCEEEEE-T-TEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE-EE
T ss_pred eEEEEECCCCeEEECCCCCCc--ccceEEEEE-C-CEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh-hh
Confidence 577776 899987655431 111222222 3 4566541 000 000 0 0011346899999999999 77
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.11 E-value=6.3e-08 Score=87.37 Aligned_cols=202 Identities=9% Similarity=-0.046 Sum_probs=125.0
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..+.++||.|++|..+|+.+..... ... ..++ + +++.+............+++|+..++.|+.+. .+|.
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~---~~~--~~~~---~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~ 138 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDS---LAA--CAAE---G--KIYTSGGSEVGNSALYLFECYDTRTESWHTKP-SMLT 138 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBS---CEE--EEET---T--EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-CCSS
T ss_pred ceEEEEeCCCCeEEECCCCCccccc---eeE--EEEC---C--EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-CCcC
Confidence 5789999999999999887654321 111 1222 1 56665543212234567899999999999987 6654
Q ss_pred eeecCCcceeeCceEEEEEecCCCCCC---ccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC
Q 016752 199 YILHGWDGTFADGHVHWLVTNNPKDDI---ENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP 274 (383)
Q Consensus 199 ~~~~~~~~v~~~G~lywl~~~~~~~~~---~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~ 274 (383)
.. .....+.++|.+|.+.+....... ...+..||+.+++|+.++ +|.... ...++..+|+|+++......
T Consensus 139 ~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 139 QR-CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-----NHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp CC-BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCEETT
T ss_pred Cc-ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh-----cceEEEECCEEEEEeCCCCC
Confidence 21 223567889999999865332110 345899999999999985 443322 22467779999999754321
Q ss_pred -CcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 275 -QPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 275 -~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
..-.+|.++ .+|.++..++. +.......+. + +.|++.- ..+-......+..||+++++|+ .+.
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~~~~yd~~~~~W~-~~~ 279 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVSPMPW--KGVTVKCAAV-G-SIVYVLA----GFQGVGRLGHILEYNTETDKWV-ANS 279 (306)
T ss_dssp EEBCCEEEEETTTTEEEECCCCSC--CBSCCEEEEE-T-TEEEEEE----CBCSSSBCCEEEEEETTTTEEE-EEE
T ss_pred CCCceEEEeeCCCCcEEECCCCCC--CccceeEEEE-C-CEEEEEe----CcCCCeeeeeEEEEcCCCCeEE-eCC
Confidence 123466665 88998765443 1111122222 3 4556551 0000012347999999999999 774
No 4
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.08 E-value=1.5e-11 Score=80.16 Aligned_cols=42 Identities=21% Similarity=0.384 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhcCChHHHH
Q 016752 1 MAGLPTDINIDILSRLSIKCLLRFKCASKSFCSLIDSQEFIK 42 (383)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~ 42 (383)
++.||+|++.+||++||++++.++++|||+|+.++.++.|.+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 578999999999999999999999999999999999998754
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.07 E-value=3.7e-08 Score=88.91 Aligned_cols=224 Identities=13% Similarity=0.102 Sum_probs=133.7
Q ss_pred CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCC
Q 016752 118 ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFP 197 (383)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p 197 (383)
...+.++||.|++|..+++.+..+.. + .. ..++ + +++.++... ......+++|+..++.|+.+. .+|
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~-~~p 89 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRD--A-AC--VFWD----N-VVYILGGSQ--LFPIKRMDCYNVVKDSWYSKL-GPP 89 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBS--C-EE--EEET----T-EEEEECCBS--SSBCCEEEEEETTTTEEEEEE-CCS
T ss_pred CceEEEecCCCCCEecCCCCCcccce--e-EE--EEEC----C-EEEEEeCCC--CCCcceEEEEeCCCCeEEECC-CCC
Confidence 35799999999999999887664321 1 11 1122 2 455554322 234567899999999999987 665
Q ss_pred eeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCC-
Q 016752 198 YYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ- 275 (383)
Q Consensus 198 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~- 275 (383)
.. ......+.++|.+|.+++..........+..||+.+++|+.++ +|.... ....+..+|+|+++.......
T Consensus 90 ~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 90 TP-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC-----SHGMVEANGLIYVCGGSLGNNV 163 (306)
T ss_dssp SC-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCEESCTT
T ss_pred cc-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc-----eeEEEEECCEEEEECCCCCCCC
Confidence 32 1222567889999999875422223345999999999999984 443322 224577899999997642211
Q ss_pred ----cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 276 ----PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 276 ----~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
.-.+|.++ ..|.++..++. +.....+.+. + +.|++.- ..+.......+..||+++++|+ .+.-.
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~~~~yd~~~~~W~-~~~~~ 234 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIE--ARKNHGLVFV-K-DKIFAVG----GQNGLGGLDNVEYYDIKLNEWK-MVSPM 234 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEC----CEETTEEBCCEEEEETTTTEEE-ECCCC
T ss_pred cccccceEEEeCCCCCeEEECCCccc--hhhcceEEEE-C-CEEEEEe----CCCCCCCCceEEEeeCCCCcEE-ECCCC
Confidence 23456665 89998764443 1112222222 3 4566651 0000001246899999999999 76321
Q ss_pred c-cCCCeeeEEEEEccccccccC
Q 016752 349 G-VPQGCRDTLVCVDSLVSLAAY 370 (383)
Q Consensus 349 ~-~~~~~~~~~~y~~sl~~~~~~ 370 (383)
. .... +.+..+.+.|+-+.+.
T Consensus 235 p~~r~~-~~~~~~~~~i~v~GG~ 256 (306)
T 3ii7_A 235 PWKGVT-VKCAAVGSIVYVLAGF 256 (306)
T ss_dssp SCCBSC-CEEEEETTEEEEEECB
T ss_pred CCCccc-eeEEEECCEEEEEeCc
Confidence 1 1122 3455555555555443
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.06 E-value=7.5e-08 Score=86.63 Aligned_cols=200 Identities=13% Similarity=0.087 Sum_probs=124.2
Q ss_pred CcEEEEcCCccc---eeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccC
Q 016752 119 NGIAFWNPSTKE---HLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVD 195 (383)
Q Consensus 119 ~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~ 195 (383)
..++++||.|++ |..+|+.+..... ... ..++ + +++.+.... .......+++|+..+++|+.+. .
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~---~~~--~~~~----~-~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~ 145 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGL---AGA--TTLG----D-MIYVSGGFD-GSRRHTSMERYDPNIDQWSMLG-D 145 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBS---CEE--EEET----T-EEEEECCBC-SSCBCCEEEEEETTTTEEEEEE-E
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccc---eeE--EEEC----C-EEEEEcccC-CCcccceEEEEcCCCCeEEECC-C
Confidence 479999999999 9999887655321 111 1122 2 556555332 1223467999999999999987 6
Q ss_pred CCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC
Q 016752 196 FPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP 274 (383)
Q Consensus 196 ~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~ 274 (383)
+|.. ......+.++|.+|.+++.... .....+..||+.+++|+.++ +|.... ...++..+|+|+++......
T Consensus 146 ~p~~-r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 146 MQTA-REGAGLVVASGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVTPMATKRS-----GAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp CSSC-CBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBCSS
T ss_pred CCCC-cccceEEEECCEEEEECCCCCC-cccceEEEEeCCCCcEEeCCCCCcccc-----cceEEEECCEEEEEeCCCCC
Confidence 5532 1223567789999999865431 12345999999999999984 443322 22467789999999765432
Q ss_pred C-cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 275 Q-PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 275 ~-~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
. .-.+|.++ .+|.++..++. +.......+. + +.|++.- ..+.......+..||+++++|+ .+.
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~-~~~ 285 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTT--PRCYVGATVL-R-GRLYAIA----GYDGNSLLSSIECYDPIIDSWE-VVT 285 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEC----CBCSSSBEEEEEEEETTTTEEE-EEE
T ss_pred cccceEEEEeCCCCcEEECCCCCC--cccceeEEEE-C-CEEEEEc----CcCCCcccccEEEEcCCCCeEE-EcC
Confidence 1 23455555 89998765443 1111222222 3 4566651 1000011246899999999999 763
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.06 E-value=6.5e-08 Score=87.12 Aligned_cols=201 Identities=12% Similarity=0.162 Sum_probs=124.6
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..+.++||.|++|..+|+.+..+.. + .. ..++ + +++.+.... .......+++|+..++.|+.+. .+|.
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~iyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~~p~ 144 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRST--L-GA--AVLN----G-LLYAVGGFD-GSTGLSSVEAYNIKSNEWFHVA-PMNT 144 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS--C-EE--EEET----T-EEEEEEEEC-SSCEEEEEEEEETTTTEEEEEC-CCSS
T ss_pred cceEEECCCCCceeeCCCCCccccc--e-EE--EEEC----C-EEEEEcCCC-CCccCceEEEEeCCCCeEeecC-CCCC
Confidence 4689999999999999987655321 1 11 1122 2 555555432 2223467899999999999987 6653
Q ss_pred eeecCCcceeeCceEEEEEecCCCC-CCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCC-
Q 016752 199 YILHGWDGTFADGHVHWLVTNNPKD-DIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ- 275 (383)
Q Consensus 199 ~~~~~~~~v~~~G~lywl~~~~~~~-~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~- 275 (383)
. ......+.++|.+|.+++..... .....+..||+.+++|+.++ +|.... ...++..+|+|+++.......
T Consensus 145 ~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 145 R-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-----GAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp C-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBSSSSB
T ss_pred c-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-----cccEEEECCEEEEECCCCCCcc
Confidence 2 12225678899999997653211 01234899999999999984 443322 224677899999997654321
Q ss_pred cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 276 PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 276 ~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
.-.+|.++ ..|.++..++. +.....+.+. + +.|++.- ..+-......+..||+++++|+ .+.
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~-~~~ 283 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADMNM--CRRNAGVCAV-N-GLLYVVG----GDDGSCNLASVEYYNPTTDKWT-VVS 283 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEC----CBCSSSBCCCEEEEETTTTEEE-ECS
T ss_pred cceEEEEeCCCCCEeeCCCCCC--ccccCeEEEE-C-CEEEEEC----CcCCCcccccEEEEcCCCCeEE-ECC
Confidence 23466666 89998765443 1111122222 3 4566651 1110012246999999999999 763
No 8
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.05 E-value=3.5e-11 Score=106.45 Aligned_cols=48 Identities=17% Similarity=0.321 Sum_probs=45.7
Q ss_pred CCCCcHHHHHHHHccCCcccce-eeeecchhhhhhcCChHHHHHHHhhc
Q 016752 1 MAGLPTDINIDILSRLSIKCLL-RFKCASKSFCSLIDSQEFIKIHLKRS 48 (383)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~sl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 48 (383)
|+.||+|||.+||+|||+++|+ ||++|||+|+++++++.|.+.++.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5789999999999999999999 99999999999999999999998876
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.03 E-value=8.9e-08 Score=86.57 Aligned_cols=200 Identities=13% Similarity=0.097 Sum_probs=124.3
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..++++||.|++|..+|+++..+.. ... ..++ + +++.+..... ......+++|+..+++|+.+. .+|.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~---~~~--~~~~---~--~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~-~~p~ 157 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNR---IGV--GVID---G--HIYAVGGSHG-CIHHNSVERYEPERDEWHLVA-PMLT 157 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBT---CEE--EEET---T--EEEEECCEET-TEECCCEEEEETTTTEEEECC-CCSS
T ss_pred ceEEEECCCCCeEeECCCCCcCccc---cEE--EEEC---C--EEEEEcCCCC-CcccccEEEECCCCCeEeECC-CCCc
Confidence 4689999999999999987664321 111 1122 1 5666554321 223456899999999999987 6553
Q ss_pred eeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC-Cc
Q 016752 199 YILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP-QP 276 (383)
Q Consensus 199 ~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~-~~ 276 (383)
. ......+.++|.+|.+++.... .....+..||+.+++|+.++ +|.... ....+..+|+|+++...... ..
T Consensus 158 ~-r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 158 R-RIGVGVAVLNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTIRS-----GAGVCVLHNCIYAAGGYDGQDQL 230 (308)
T ss_dssp C-CBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEECCBCSSSBC
T ss_pred c-ccceEEEEECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCccc-----cceEEEECCEEEEEeCCCCCCcc
Confidence 2 1223567789999999865432 11345999999999999885 343321 22456779999999865331 12
Q ss_pred EEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 277 VDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 277 l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
-.+|+++ .+|.++..++. +.....+.+. + +.|++.- ..+-......+..||+++++|+ ++.
T Consensus 231 ~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~-~~~ 294 (308)
T 1zgk_A 231 NSVERYDVETETWTFVAPMKH--RRSALGITVH-Q-GRIYVLG----GYDGHTFLDSVECYDPDTDTWS-EVT 294 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS--CCBSCEEEEE-T-TEEEEEC----CBCSSCBCCEEEEEETTTTEEE-EEE
T ss_pred ceEEEEeCCCCcEEECCCCCC--CccceEEEEE-C-CEEEEEc----CcCCCcccceEEEEcCCCCEEe-ecC
Confidence 3466665 89998765443 1111122222 3 4566651 1110112357999999999999 764
No 10
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.99 E-value=5.6e-07 Score=85.73 Aligned_cols=45 Identities=20% Similarity=0.322 Sum_probs=40.4
Q ss_pred CCCcHHHHHHHHccCCcccceeeeecchhhhhhcCC-hHHHHHHHh
Q 016752 2 AGLPTDINIDILSRLSIKCLLRFKCASKSFCSLIDS-QEFIKIHLK 46 (383)
Q Consensus 2 ~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~-~~F~~~~~~ 46 (383)
+.||+|++.+||+.||+++|++++.|||+|+.++.+ +...+.+..
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~ 61 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLI 61 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 469999999999999999999999999999999998 777666553
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.95 E-value=5e-07 Score=81.18 Aligned_cols=224 Identities=12% Similarity=0.113 Sum_probs=133.7
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc---eEEeccC
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS---WRRIRVD 195 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~---Wr~~~~~ 195 (383)
..++++||.|++|..+|..+..... . .. ...+ + +++.+.... .......+++|+..++. |+.+. .
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~l~v~GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~-~ 98 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRY--V-AS--VSLH----D-RIYVIGGYD-GRSRLSSVECLDYTADEDGVWYSVA-P 98 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS--C-EE--EEET----T-EEEEECCBC-SSCBCCCEEEEETTCCTTCCCEEEC-C
T ss_pred eEEEEEcCCCCeEEeCCCCChhhcc--c-cE--EEEC----C-EEEEEcCCC-CCccCceEEEEECCCCCCCeeEECC-C
Confidence 4689999999999999976654211 1 11 1122 1 555555322 22234578999999999 99997 6
Q ss_pred CCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC
Q 016752 196 FPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP 274 (383)
Q Consensus 196 ~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~ 274 (383)
+|.. ......+.++|.+|.+.+.... .....+..||+.+++|+.++ +|.... ....+..+|+|+++......
T Consensus 99 ~p~~-r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 99 MNVR-RGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTARE-----GAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp CSSC-CBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCB-----SCEEEEETTEEEEECCBCSS
T ss_pred CCCC-ccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcc-----cceEEEECCEEEEECCCCCC
Confidence 6542 1222567789999999875432 22345999999999999884 443322 12456779999999765331
Q ss_pred -CcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEecc
Q 016752 275 -QPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGV 350 (383)
Q Consensus 275 -~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~ 350 (383)
..-.+|.++ ..|.++..++. +.......+. + +.|++.- ..+.......+..||+++++|+ .+.....
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~ 242 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMAT--KRSGAGVALL-N-DHIYVVG----GFDGTAHLSSVEAYNIRTDSWT-TVTSMTT 242 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEC----CBCSSSBCCCEEEEETTTTEEE-EECCCSS
T ss_pred cccceEEEEeCCCCcEEeCCCCCc--ccccceEEEE-C-CEEEEEe----CCCCCcccceEEEEeCCCCcEE-ECCCCCC
Confidence 123456665 89998754433 1111122222 3 4566651 1100011346999999999999 7742211
Q ss_pred CCCeeeEEEEEccccccccC
Q 016752 351 PQGCRDTLVCVDSLVSLAAY 370 (383)
Q Consensus 351 ~~~~~~~~~y~~sl~~~~~~ 370 (383)
....+.+..+.+.|.-+.+.
T Consensus 243 ~r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 243 PRCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp CCBSCEEEEETTEEEEECCB
T ss_pred cccceeEEEECCEEEEEcCc
Confidence 11114455555555555443
No 12
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.95 E-value=2e-06 Score=81.52 Aligned_cols=286 Identities=11% Similarity=0.093 Sum_probs=144.5
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhcCChHHHHHHHhhccCCCCCeEEEecCCCCCCCCCcccccceeEee
Q 016752 1 MAGLPTDINIDILSRLSIKCLLRFKCASKSFCSLIDSQEFIKIHLKRSIETNTNLSLILSGTPAPILDSSRYWNGKIFSA 80 (383)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (383)
++.||+|++.+||+.|++++|.++++|||+|+.++.++.+.+....+.....+.. ........+.. ....+. ..+..
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~wk-~~~~~ 95 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH-IKRRKVIKPGF-IHSPWK-SAYIR 95 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCC-CCC--CCSSCC-CCCHHH-HHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccc-cccceecCCCc-cCCcHH-HHHhh
Confidence 4689999999999999999999999999999999999998887665432211100 00000000000 000000 00000
Q ss_pred cCCCCCCccccCC--C---CCCCCCC-eeeeeCcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEee
Q 016752 81 SLDSLNLGVELDH--P---FKNCKGR-TPIIDSCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGY 154 (383)
Q Consensus 81 ~~~~~~~~~~l~~--p---~~~~~~~-~~~~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~ 154 (383)
.. .....+.... + +...... ...+...+.+|+....+..+.|||..|++...--... ......+.+
T Consensus 96 ~~-~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~ 167 (445)
T 2ovr_B 96 QH-RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH-------TGGVWSSQM 167 (445)
T ss_dssp HH-HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCC-------SSCEEEEEE
T ss_pred hh-hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC-------CCCEEEEEe
Confidence 00 0000000000 0 0111111 1234444566666666778999999988765322211 112233444
Q ss_pred ecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEEC
Q 016752 155 DAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNL 234 (383)
Q Consensus 155 d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~ 234 (383)
++ + .++... ....+.+|+..++.-...-.... ..-.++.++|.....+..+. .|..+|+
T Consensus 168 ~~---~-~l~s~~-------~dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~s~s~dg------~i~~wd~ 226 (445)
T 2ovr_B 168 RD---N-IIISGS-------TDRTLKVWNAETGECIHTLYGHT----STVRCMHLHEKRVVSGSRDA------TLRVWDI 226 (445)
T ss_dssp ET---T-EEEEEE-------TTSCEEEEETTTTEEEEEECCCS----SCEEEEEEETTEEEEEETTS------EEEEEES
T ss_pred cC---C-EEEEEe-------CCCeEEEEECCcCcEEEEECCCC----CcEEEEEecCCEEEEEeCCC------EEEEEEC
Confidence 42 2 222222 24567888888763211110000 00133444555544443332 4888998
Q ss_pred CCceee-EecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEE
Q 016752 235 ESEEFQ-EVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKV 312 (383)
Q Consensus 235 ~~e~~~-~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v 312 (383)
.+.+.. .+..... .+.-...+|...++..... .+.+|-++ ++ ...++... .....-+.+ ++..+
T Consensus 227 ~~~~~~~~~~~~~~-------~v~~~~~~~~~l~~~~~dg--~i~iwd~~~~~--~~~~~~~~-~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 227 ETGQCLHVLMGHVA-------AVRCVQYDGRRVVSGAYDF--MVKVWDPETET--CLHTLQGH-TNRVYSLQF--DGIHV 292 (445)
T ss_dssp SSCCEEEEEECCSS-------CEEEEEECSSCEEEEETTS--CEEEEEGGGTE--EEEEECCC-SSCEEEEEE--CSSEE
T ss_pred CCCcEEEEEcCCcc-------cEEEEEECCCEEEEEcCCC--EEEEEECCCCc--EeEEecCC-CCceEEEEE--CCCEE
Confidence 876533 2332211 1122233777666666555 79999887 42 22333320 111222333 66776
Q ss_pred EEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 313 LVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 313 ~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.. ..++.+..||+++++..
T Consensus 293 ~~~----------~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 293 VSG----------SLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EEE----------ETTSCEEEEETTTCCEE
T ss_pred EEE----------eCCCeEEEEECCCCCEE
Confidence 666 36778999999888765
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.94 E-value=9.1e-08 Score=88.32 Aligned_cols=245 Identities=11% Similarity=0.065 Sum_probs=132.0
Q ss_pred CeeEEEec--CCCcEEEEcCC--ccceeecCCCC-CCCcCccceeEEEEeeecCCCCEEEEEEEEEee----cCCcccEE
Q 016752 109 NGLIALKN--DENGIAFWNPS--TKEHLILPKFW-GDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVR----ENVEYTEV 179 (383)
Q Consensus 109 ~GLll~~~--~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~----~~~~~~~~ 179 (383)
+|.|.+.. ....++++||. +++|..+|+.+ ..+.. ... ..++ + +|+.++.... .......+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~---~~~--~~~~---~--~lyv~GG~~~~~~~~~~~~~~v 88 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ---ATS--AFID---G--NLYVFGGIGKNSEGLTQVFNDV 88 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS---CEE--EEET---T--EEEEECCEEECTTSCEEECCCE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc---ceE--EEEC---C--EEEEEcCCCCCCCccceeeccE
Confidence 56555443 23579999998 59999999876 33211 111 1122 2 5555554311 11134568
Q ss_pred EEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCC---------------------------------CCc
Q 016752 180 SVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKD---------------------------------DIE 226 (383)
Q Consensus 180 ~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~---------------------------------~~~ 226 (383)
++|+..+++|+.+. .++.........+.++|.+|.+.+..... ...
T Consensus 89 ~~yd~~~~~W~~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (357)
T 2uvk_A 89 HKYNPKTNSWVKLM-SHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFN 167 (357)
T ss_dssp EEEETTTTEEEECS-CCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCC
T ss_pred EEEeCCCCcEEECC-CCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCc
Confidence 99999999999987 55411111224567999999998753210 012
Q ss_pred cEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC--CcEEEEEe----C-CceeeeEEEcCCCCc
Q 016752 227 NLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP--QPVDIWVL----K-GCWTKAFSFHRSVGD 298 (383)
Q Consensus 227 ~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~--~~l~iW~l----~-~~W~~~~~i~~~~~~ 298 (383)
..+..||+.+++|+.+. +|..... ...++..+|+|+++...... ..-++|.+ + ..|.++..++...+.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~----~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTA----GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCB----SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcc----cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 46999999999999884 4533221 12567789999999653211 12345554 3 899987655432111
Q ss_pred eeEEEEEEeCCCEEEEEe-ccCCCc-------c---c--cCCCcEEEEEeCCCCeEEEEEEEeccCCCeeeEEEEEcccc
Q 016752 299 YVKALAYSKSEDKVLVDK-FKYGEE-------D---D--DINRWELYWYDPQSQKAADQVTIHGVPQGCRDTLVCVDSLV 365 (383)
Q Consensus 299 ~~~~~~~~~~g~~v~l~~-~~~~~~-------~---~--~~~~~~~~~ydl~~~~~~~~v~~~~~~~~~~~~~~y~~sl~ 365 (383)
....+.+ .+ +.|++.- ....+. + . ...-..+..||+++++|+ ++.-...+.....+..+...|+
T Consensus 244 ~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~~~~i~ 320 (357)
T 2uvk_A 244 AGGFAGI-SN-DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD-KSGELSQGRAYGVSLPWNNSLL 320 (357)
T ss_dssp BSCEEEE-ET-TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE-EEEECSSCCBSSEEEEETTEEE
T ss_pred ccceEEE-EC-CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee-eCCCCCCCcccceeEEeCCEEE
Confidence 1222222 23 4566651 000000 0 0 000025789999999999 7743222211134445555555
Q ss_pred ccccCC
Q 016752 366 SLAAYA 371 (383)
Q Consensus 366 ~~~~~~ 371 (383)
-+.+..
T Consensus 321 v~GG~~ 326 (357)
T 2uvk_A 321 IIGGET 326 (357)
T ss_dssp EEEEEC
T ss_pred EEeeeC
Confidence 555543
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.93 E-value=1.5e-07 Score=85.16 Aligned_cols=225 Identities=12% Similarity=0.046 Sum_probs=131.8
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEe---ecCCcccEEEEEEcCCCceEEeccC
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFV---RENVEYTEVSVYSLRSNSWRRIRVD 195 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~---~~~~~~~~~~vyss~~~~Wr~~~~~ 195 (383)
..+.++||.|++|..+++.+..+.. . ..+ ..+ + +|+.+.... ........+++|+..++.|+.+. .
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~--~-~~~--~~~----~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~ 107 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSG--L-AGC--VVG----G-LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA-P 107 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS--C-EEE--EET----T-EEEEECCEEEETTEEEECCCEEEEETTTTEEEECC-C
T ss_pred ceEEEEcCCCCeEeECCCCCccccc--c-eEE--EEC----C-EEEEECCCcCCCCCCeecceEEEECCCCCeEeECC-C
Confidence 4689999999999999877654321 1 111 111 2 455554331 11113356899999999999987 6
Q ss_pred CCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCC
Q 016752 196 FPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP 274 (383)
Q Consensus 196 ~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~ 274 (383)
+|.. ......+.++|.+|.+.+.... .....+..||+.+++|+.++ +|.... ....+..+|+|+++......
T Consensus 108 ~p~~-r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 108 MSVP-RNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRRI-----GVGVAVLNRLLYAVGGFDGT 180 (308)
T ss_dssp CSSC-CBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEECCBCSS
T ss_pred CCcC-ccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCcccc-----ceEEEEECCEEEEEeCCCCC
Confidence 6542 1222567789999999764321 11234899999999999884 444332 12456779999999765432
Q ss_pred C-cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEecc
Q 016752 275 Q-PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGV 350 (383)
Q Consensus 275 ~-~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~ 350 (383)
. .-.+|.++ .+|.++..++. +.......+. + +.||+.- ..+-......+..||+++++|+ .+.-...
T Consensus 181 ~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~iyv~G----G~~~~~~~~~v~~yd~~~~~W~-~~~~~p~ 251 (308)
T 1zgk_A 181 NRLNSAECYYPERNEWRMITAMNT--IRSGAGVCVL-H-NCIYAAG----GYDGQDQLNSVERYDVETETWT-FVAPMKH 251 (308)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEE-T-TEEEEEC----CBCSSSBCCCEEEEETTTTEEE-ECCCCSS
T ss_pred CcCceEEEEeCCCCeEeeCCCCCC--ccccceEEEE-C-CEEEEEe----CCCCCCccceEEEEeCCCCcEE-ECCCCCC
Confidence 1 23456655 89998765443 1111222222 3 5666651 1000011356999999999999 7642111
Q ss_pred CCCeeeEEEEEccccccccC
Q 016752 351 PQGCRDTLVCVDSLVSLAAY 370 (383)
Q Consensus 351 ~~~~~~~~~y~~sl~~~~~~ 370 (383)
....+.+..+.+.|.-+.+.
T Consensus 252 ~r~~~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 252 RRSALGITVHQGRIYVLGGY 271 (308)
T ss_dssp CCBSCEEEEETTEEEEECCB
T ss_pred CccceEEEEECCEEEEEcCc
Confidence 11113455555555555443
No 15
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.92 E-value=3.7e-07 Score=82.12 Aligned_cols=224 Identities=12% Similarity=0.098 Sum_probs=132.6
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..+.++||.+++|..+++.+..... . .. ..++ + +|+.++... .......+++|+..++.|+.++ .+|.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~--~-~~--~~~~----~-~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~~p~ 97 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCR--A-GM--VYMA----G-LVFAVGGFN-GSLRVRTVDSYDPVKDQWTSVA-NMRD 97 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS--C-EE--EEET----T-EEEEESCBC-SSSBCCCEEEEETTTTEEEEEC-CCSS
T ss_pred CcEEEEcCcCCcEeEcccCCccccc--c-eE--EEEC----C-EEEEEeCcC-CCccccceEEECCCCCceeeCC-CCCc
Confidence 4688999999999999877654321 1 11 1111 2 455554322 1223456899999999999998 6654
Q ss_pred eeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCC--
Q 016752 199 YILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ-- 275 (383)
Q Consensus 199 ~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~-- 275 (383)
.. .....+.++|.+|.+++.... .....+..||+.+++|+.++ +|.... ....+..+|+|+++.......
T Consensus 98 ~r-~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 98 RR-STLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRS-----SVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CC-BSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCEETTTTE
T ss_pred cc-cceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCccc-----CceEEEECCEEEEEeCCCCCCCc
Confidence 21 222567789999999876532 22345889999999999985 343321 224577899999997643211
Q ss_pred -cEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEeccC
Q 016752 276 -PVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGVP 351 (383)
Q Consensus 276 -~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~~ 351 (383)
.-.+|.++ ..|.++..++. +.....+.+. + +.|++.- ..+-......+..||+++++|+ .+.-....
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~iyv~G----G~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~ 241 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMST--RRSGAGVGVL-N-NLLYAVG----GHDGPLVRKSVEVYDPTTNAWR-QVADMNMC 241 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE-T-TEEEEEC----CBSSSSBCCCEEEEETTTTEEE-EECCCSSC
T ss_pred cccEEEEEeCCCCcEEECCCCcc--ccccccEEEE-C-CEEEEEC----CCCCCcccceEEEEeCCCCCEe-eCCCCCCc
Confidence 22456665 89998755443 1111222222 3 4566651 1000011346999999999999 76422211
Q ss_pred CCeeeEEEEEccccccccC
Q 016752 352 QGCRDTLVCVDSLVSLAAY 370 (383)
Q Consensus 352 ~~~~~~~~y~~sl~~~~~~ 370 (383)
.....+..+.+.|.-+.+.
T Consensus 242 r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 242 RRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp CBSCEEEEETTEEEEECCB
T ss_pred cccCeEEEECCEEEEECCc
Confidence 1113445555555555443
No 16
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.83 E-value=7.3e-07 Score=80.74 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=119.0
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEee---c--CCcccEEEEEEcCCCceEEec
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVR---E--NVEYTEVSVYSLRSNSWRRIR 193 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~---~--~~~~~~~~vyss~~~~Wr~~~ 193 (383)
..+.++||.|++|.. ++.+....+ ....... ..+ +|+.++.... . ......+++|+..+++|+.++
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r----~~~~~~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPK----NHVSLVT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCS----SEEEEEC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEec-CCCCCCCCc----cceEEEE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 579999999999986 333222111 1111111 122 4444444311 1 112234889999999999887
Q ss_pred cCCCeeeecCCcceeeCceEEEEEecC--CCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEe
Q 016752 194 VDFPYYILHGWDGTFADGHVHWLVTNN--PKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCL 270 (383)
Q Consensus 194 ~~~p~~~~~~~~~v~~~G~lywl~~~~--~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~ 270 (383)
.+|..- .....+.++|.+|.+++.. .+......+..||+.+++|+.++ +|.... ....+..+|+|+++..
T Consensus 84 -~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 84 -PLPSPR-CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY-----GHTVLSHMDLVYVIGG 156 (315)
T ss_dssp -CBSSCE-ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEECC
T ss_pred -CCCcch-hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc-----ceeEEEECCEEEEEeC
Confidence 665321 2235678899999998743 11123345899999999999884 444332 2246778999999987
Q ss_pred c-CC-CCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 271 C-NY-PQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 271 ~-~~-~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
. .. ...-.+|.++ .+|.++..++. +......++. + +.|++.- ..+.......+..||+++++|+ .+
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~-~-~~iyv~G----G~~~~~~~~~~~~yd~~~~~W~-~~ 227 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQT--ARSLFGATVH-D-GRIIVAA----GVTDTGLTSSAEVYSITDNKWA-PF 227 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEE-T-TEEEEEE----EECSSSEEEEEEEEETTTTEEE-EE
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCC--chhceEEEEE-C-CEEEEEe----ccCCCCccceEEEEECCCCeEE-EC
Confidence 5 22 1123566666 89998765543 2111222222 3 4556541 0000001236899999999999 76
Q ss_pred E
Q 016752 346 T 346 (383)
Q Consensus 346 ~ 346 (383)
.
T Consensus 228 ~ 228 (315)
T 4asc_A 228 E 228 (315)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.80 E-value=1.4e-06 Score=82.41 Aligned_cols=290 Identities=12% Similarity=0.128 Sum_probs=140.8
Q ss_pred CCCcHH----HHHHHHccCCcccceeeeecchhhhhhcCChHHHHHHHhhccCCC---------CCe-EEEecCCC-CCC
Q 016752 2 AGLPTD----INIDILSRLSIKCLLRFKCASKSFCSLIDSQEFIKIHLKRSIETN---------TNL-SLILSGTP-API 66 (383)
Q Consensus 2 ~~LP~D----ll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~~~~~---------~~~-~~~~~~~~-~~~ 66 (383)
+.||+| |+..||+.|++++|.++.+|||+|+.++.++.+.+....+..... ..+ ..++.... ...
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 469999 999999999999999999999999999999887776555431100 000 00000000 000
Q ss_pred CCCcccccceeEee---cCCCCCCccccC----CCCC---CCCCCeeeeeCcCeeEEEecCCCcEEEEcCCccceeecCC
Q 016752 67 LDSSRYWNGKIFSA---SLDSLNLGVELD----HPFK---NCKGRTPIIDSCNGLIALKNDENGIAFWNPSTKEHLILPK 136 (383)
Q Consensus 67 ~~~~~~~~~~~~~~---~~~~~~~~~~l~----~p~~---~~~~~~~~~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~ 136 (383)
.+...+.. .++.- ........+... ..+. .....+..+...+..++....+..+.|||..|++....-.
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 92 APPNSFYR-ALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp -CCSHHHH-HHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred CCchhhHH-hhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 00000000 00000 000000000000 0000 0111233344445555555566789999999887654322
Q ss_pred CCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEE
Q 016752 137 FWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWL 216 (383)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl 216 (383)
... .....+.+| +++ ++... ....+.+|+..++.-...- .... ..-..+.+++.....
T Consensus 171 ~h~-------~~v~~l~~~---~~~-l~sg~-------~dg~i~vwd~~~~~~~~~~-~~h~---~~v~~l~~~~~~l~s 228 (435)
T 1p22_A 171 GHT-------GSVLCLQYD---ERV-IITGS-------SDSTVRVWDVNTGEMLNTL-IHHC---EAVLHLRFNNGMMVT 228 (435)
T ss_dssp CCS-------SCEEEEECC---SSE-EEEEE-------TTSCEEEEESSSCCEEEEE-CCCC---SCEEEEECCTTEEEE
T ss_pred CCC-------CcEEEEEEC---CCE-EEEEc-------CCCeEEEEECCCCcEEEEE-cCCC---CcEEEEEEcCCEEEE
Confidence 111 122334443 222 22222 2356788888876432111 0000 001334445554444
Q ss_pred EecCCCCCCccEEEEEECCCceeeEe--cCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEc
Q 016752 217 VTNNPKDDIENLIVAFNLESEEFQEV--PLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFH 293 (383)
Q Consensus 217 ~~~~~~~~~~~~il~fD~~~e~~~~i--~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~ 293 (383)
+..+. .|..+|+.+..-... .+..+. . .+.-...+|...++..... .+.+|-++ ++ ...++.
T Consensus 229 ~s~dg------~i~vwd~~~~~~~~~~~~~~~~~---~--~v~~~~~~~~~l~s~~~dg--~i~vwd~~~~~--~~~~~~ 293 (435)
T 1p22_A 229 CSKDR------SIAVWDMASPTDITLRRVLVGHR---A--AVNVVDFDDKYIVSASGDR--TIKVWNTSTCE--FVRTLN 293 (435)
T ss_dssp EETTS------CEEEEECSSSSCCEEEEEECCCS---S--CEEEEEEETTEEEEEETTS--EEEEEETTTCC--EEEEEE
T ss_pred eeCCC------cEEEEeCCCCCCceeeeEecCCC---C--cEEEEEeCCCEEEEEeCCC--eEEEEECCcCc--EEEEEc
Confidence 43332 388899876543211 111111 1 1122233666666665555 89999988 42 233333
Q ss_pred CCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 294 RSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 294 ~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.-. ... .++.-+++.++.. ..++.+..||+++++..
T Consensus 294 ~~~-~~v--~~~~~~~~~l~~g----------~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 294 GHK-RGI--ACLQYRDRLVVSG----------SSDNTIRLWDIECGACL 329 (435)
T ss_dssp CCS-SCE--EEEEEETTEEEEE----------ETTSCEEEEETTTCCEE
T ss_pred CCC-CcE--EEEEeCCCEEEEE----------eCCCeEEEEECCCCCEE
Confidence 211 112 2222256666666 36778999999987755
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.79 E-value=6.5e-07 Score=82.52 Aligned_cols=202 Identities=11% Similarity=0.108 Sum_probs=113.5
Q ss_pred CcEEEEcCCccceeecCCCC-CCCcCccceeEEEEeeecCCCCEEEEEEEEEeecC------------------------
Q 016752 119 NGIAFWNPSTKEHLILPKFW-GDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVREN------------------------ 173 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~------------------------ 173 (383)
..+.++||.|.+|..+++.+ ... .... ...++ + +++.+.......
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r----~~~~-~~~~~---~--~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGM----AGHV-TFVHN---G--KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAH 155 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCC----SSEE-EEEET---T--EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCCccc----ccce-EEEEC---C--EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhh
Confidence 46999999999999998866 221 1111 11122 1 566665432110
Q ss_pred ---------CcccEEEEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEEC--CCceeeEe
Q 016752 174 ---------VEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNL--ESEEFQEV 242 (383)
Q Consensus 174 ---------~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~--~~e~~~~i 242 (383)
.....+++|+..++.|+.+. .+|.........+.++|.+|.+.+..........+..||+ .+++|+.+
T Consensus 156 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 156 YFDKKAEDYFFNKFLLSFDPSTQQWSYAG-ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp HHSSCGGGGCCCCEEEEEETTTTEEEEEE-ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred hccccccccCCcccEEEEeCCCCcEEECC-CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 01358999999999999987 6664322223567889999999764221111223777876 89999987
Q ss_pred c-CCCcCCcCCeeeeEEEEECCeEEEEEecCC------------------CCcEEEEEeC---CceeeeEEEcCCCCcee
Q 016752 243 P-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNY------------------PQPVDIWVLK---GCWTKAFSFHRSVGDYV 300 (383)
Q Consensus 243 ~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~------------------~~~l~iW~l~---~~W~~~~~i~~~~~~~~ 300 (383)
. +|...... ...++..+|+|+++..... ...-.+|+++ .+|.++..++... ..
T Consensus 235 ~~~~~~~~~~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~ 309 (357)
T 2uvk_A 235 APVSSPDGVA---GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR--AY 309 (357)
T ss_dssp CCSSTTTCCB---SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC--BS
T ss_pred CCCCCCcccc---cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc--cc
Confidence 4 33322111 2246788999999976321 0113455655 8999887665421 11
Q ss_pred EEEEEEeCCCEEEEEeccCCCccccCC-CcEEEEEeCCCCeEE
Q 016752 301 KALAYSKSEDKVLVDKFKYGEEDDDIN-RWELYWYDPQSQKAA 342 (383)
Q Consensus 301 ~~~~~~~~g~~v~l~~~~~~~~~~~~~-~~~~~~ydl~~~~~~ 342 (383)
... +.-+ +.|++.= ..+.... -..++.++++++++.
T Consensus 310 ~~~-~~~~-~~i~v~G----G~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 310 GVS-LPWN-NSLLIIG----GETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp SEE-EEET-TEEEEEE----EECGGGCEEEEEEEEEC-CCSCE
T ss_pred cee-EEeC-CEEEEEe----eeCCCCCEeeeEEEEEEcCcEeE
Confidence 112 2224 4455541 1000001 246888999999998
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.69 E-value=9.6e-07 Score=88.92 Aligned_cols=207 Identities=11% Similarity=0.041 Sum_probs=119.6
Q ss_pred CcEEEEcCCccceeecC-CC-----CCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEe
Q 016752 119 NGIAFWNPSTKEHLILP-KF-----WGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRI 192 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP-~~-----~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~ 192 (383)
..++++||.|++|..++ +. +..+. .... ..+ .. +. +++.++...........+++|+..++.|+.+
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~---~hs~--~~~-~~-~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~ 483 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARM---CHTF--TTI-SR-NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMI 483 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCB---SCEE--EEE-TT-TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEEC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCcccc---ceEE--EEE-cc-CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEEC
Confidence 46999999999999998 52 22211 1111 111 00 22 4666654322222345689999999999998
Q ss_pred ccCCCeeeecCCcceee-CceEEEEEecCCCCCCccEEEEEECCCceeeEec----CCCcCCcCCeeeeEEEEEC---Ce
Q 016752 193 RVDFPYYILHGWDGTFA-DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP----LPHLEDKKNVLVMFVGNFS---GC 264 (383)
Q Consensus 193 ~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~~~~~~~~~L~~~~---G~ 264 (383)
. .+|..- ....++.+ +|.+|.+++..... .+..||+.+++|+.++ +|...... ..++.+ |+
T Consensus 484 ~-~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~-----~a~v~~~~~~~ 552 (695)
T 2zwa_A 484 K-SLSHTR-FRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVS-----AGLEFDPVSKQ 552 (695)
T ss_dssp C-CCSBCC-BSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBS-----CEEEEETTTTE
T ss_pred C-CCCCCc-ccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccce-----eEEEEeCCCCE
Confidence 7 666421 22245554 99999998765321 5999999999999886 34333222 223434 88
Q ss_pred EEEEEecCCC---CcEEEEEeC---Cc------eeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEE
Q 016752 265 LYFSCLCNYP---QPVDIWVLK---GC------WTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELY 332 (383)
Q Consensus 265 L~~~~~~~~~---~~l~iW~l~---~~------W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~ 332 (383)
|+++...... ..-.+|.++ .. |.++..+++ .+.......+..+ +.|++.- .............+.
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~~R~~~~~~~~~~-~~iyv~G-G~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-FQRYGSQIKYITP-RKLLIVG-GTSPSGLFDRTNSII 629 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-GCCBSCEEEEEET-TEEEEEC-CBCSSCCCCTTTSEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-CCcccceEEEeCC-CEEEEEC-CccCCCCCCCCCeEE
Confidence 9999865221 123455555 66 887766532 2222222333332 4566651 000000001234699
Q ss_pred EEeCCCCeEEEEEEEe
Q 016752 333 WYDPQSQKAADQVTIH 348 (383)
Q Consensus 333 ~ydl~~~~~~~~v~~~ 348 (383)
.||+++++|+ .+.+.
T Consensus 630 ~yd~~t~~W~-~~~~p 644 (695)
T 2zwa_A 630 SLDPLSETLT-SIPIS 644 (695)
T ss_dssp EEETTTTEEE-ECCCC
T ss_pred EEECCCCeEE-Eeecc
Confidence 9999999999 76543
No 20
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.53 E-value=2.4e-06 Score=77.35 Aligned_cols=153 Identities=12% Similarity=0.228 Sum_probs=101.3
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..+.++||.|.+|..+++.+..... + . ...++ + +++.++...........+++|+..+++|+.+. .+|.
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~--~-~--~~~~~---~--~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~ 195 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYG--H-N--VISHN---G--MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA-PMKT 195 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEES--C-E--EEEET---T--EEEEECCEESSSCBCCCEEEEETTTTEEEEEC-CCSS
T ss_pred ceEEEEeCCCCCEeECCCCCCcccc--c-E--EEEEC---C--EEEEEcCCCCCCCccceEEEEcCCCCEEEECC-CCCC
Confidence 3689999999999999876654211 1 1 11122 1 56666544333334567899999999999987 6553
Q ss_pred eeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCC----
Q 016752 199 YILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNY---- 273 (383)
Q Consensus 199 ~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~---- 273 (383)
.. .....+.++|.+|.+++.... .....+..||+++++|+.++ +|.... ...++..+|+|+++.....
T Consensus 196 ~r-~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~~~ 268 (318)
T 2woz_A 196 PR-SMFGVAIHKGKIVIAGGVTED-GLSASVEAFDLKTNKWEVMTEFPQERS-----SISLVSLAGSLYAIGGFAMIQLE 268 (318)
T ss_dssp CC-BSCEEEEETTEEEEEEEEETT-EEEEEEEEEETTTCCEEECCCCSSCCB-----SCEEEEETTEEEEECCBCCBC--
T ss_pred Cc-ccceEEEECCEEEEEcCcCCC-CccceEEEEECCCCeEEECCCCCCccc-----ceEEEEECCEEEEECCeeccCCC
Confidence 21 122567889999999875431 11235889999999999985 444322 2246788999999976432
Q ss_pred ------CCcEEEEEeC---Cceeee
Q 016752 274 ------PQPVDIWVLK---GCWTKA 289 (383)
Q Consensus 274 ------~~~l~iW~l~---~~W~~~ 289 (383)
...-.+|+++ .+|.++
T Consensus 269 ~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 269 SKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp --CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CceeccceeeeEEEEeCCCCEehhh
Confidence 1134678777 899987
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.00 E-value=6.2e-07 Score=78.42 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=44.4
Q ss_pred CCCcHHHHHHHHccCCcccceeeeecchhhhhhcCChHHHHHHHhhc
Q 016752 2 AGLPTDINIDILSRLSIKCLLRFKCASKSFCSLIDSQEFIKIHLKRS 48 (383)
Q Consensus 2 ~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~F~~~~~~~~ 48 (383)
+.||+|++..||+.|++++|+++.+|||+|+.+.+++...+.++.+.
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 46999999999999999999999999999999999999999888775
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.97 E-value=0.00013 Score=72.96 Aligned_cols=224 Identities=11% Similarity=0.006 Sum_probs=120.3
Q ss_pred CcCeeEEEecC--CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 107 SCNGLIALKND--ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 107 s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
..+|.|++..+ ...+.++||.|++|..+|+++..+.. .. ...+ + .+ ||+.+............+++|+.
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~----~s-~~~~-~-dg--~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY----QS-SATM-S-DG--RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS----CE-EEEC-T-TS--CEEEECCCCCSSSCCCCEEEEET
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccc----cc-eEEe-c-CC--eEEEEeCcccCCcccccceEeCC
Confidence 45776666553 34799999999999999877654311 11 1111 1 11 56666542222223467899999
Q ss_pred CCCceEEeccCC---CeeeecCCcceeeCceEEEEEecCCC---CCCccEEEEEECCCceeeEecCCCcC-------CcC
Q 016752 185 RSNSWRRIRVDF---PYYILHGWDGTFADGHVHWLVTNNPK---DDIENLIVAFNLESEEFQEVPLPHLE-------DKK 251 (383)
Q Consensus 185 ~~~~Wr~~~~~~---p~~~~~~~~~v~~~G~lywl~~~~~~---~~~~~~il~fD~~~e~~~~i~~P~~~-------~~~ 251 (383)
.++.|+.++ .. |.........+..+|.+|.+...... ......+..||+.++.|.....+... ...
T Consensus 322 ~t~~W~~~~-~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 322 SSKTWTSLP-NAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTEEEEET-TSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCcceeCC-CccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 999999875 21 11111111334578888888754321 01234589999999998753211110 001
Q ss_pred CeeeeEEE--EECCeEEEEEecCC-------CCcEEEEEeC---CceeeeE--EEcCCCCceeEEEEEEeCCCEEEEEec
Q 016752 252 NVLVMFVG--NFSGCLYFSCLCNY-------PQPVDIWVLK---GCWTKAF--SFHRSVGDYVKALAYSKSEDKVLVDKF 317 (383)
Q Consensus 252 ~~~~~~L~--~~~G~L~~~~~~~~-------~~~l~iW~l~---~~W~~~~--~i~~~~~~~~~~~~~~~~g~~v~l~~~ 317 (383)
+. .++ ..+|+|+++..... .....|++.+ ..|.+.. .++. +....-..+..+|.++++.=.
T Consensus 401 ~~---av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~--~R~~~~~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 401 GN---AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF--ARTFHTSVVLPDGSTFITGGQ 475 (656)
T ss_dssp CE---EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS--CCBSCEEEECTTSCEEEECCB
T ss_pred Cc---eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC--CcccCCeEECCCCCEEEECCc
Confidence 11 111 24899998876321 1122566666 7898764 3332 222333344446554443310
Q ss_pred cCCC-ccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 318 KYGE-EDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 318 ~~~~-~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
..+. .+-...-..+..||+++++|+ .+.
T Consensus 476 ~~~~~~~~~~~~~~v~~ydp~t~~W~-~~~ 504 (656)
T 1k3i_A 476 RRGIPFEDSTPVFTPEIYVPEQDTFY-KQN 504 (656)
T ss_dssp SBCCTTCCCSBCCCCEEEEGGGTEEE-ECC
T ss_pred ccCcCcCCCCcccceEEEcCCCCcee-ecC
Confidence 0000 000011246899999999999 653
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.91 E-value=0.00038 Score=69.99 Aligned_cols=185 Identities=8% Similarity=0.024 Sum_probs=110.1
Q ss_pred cccEEEEEEcCCCceEEeccC-----CCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCC
Q 016752 175 EYTEVSVYSLRSNSWRRIRVD-----FPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPH 246 (383)
Q Consensus 175 ~~~~~~vyss~~~~Wr~~~~~-----~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~ 246 (383)
....+.+|+..++.|+.+... +|.. ......+.+ +|.+|.+++.........-+..||+.+++|+.+. +|.
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~ 488 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVA-RMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH 488 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCC-CBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCcc-ccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC
Confidence 345689999999999988622 2211 112256778 9999999876542112234899999999999884 443
Q ss_pred cCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcC-CCCcee-EEEEEEeCCCEEEEEeccCC
Q 016752 247 LEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHR-SVGDYV-KALAYSKSEDKVLVDKFKYG 320 (383)
Q Consensus 247 ~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~-~~~~~~-~~~~~~~~g~~v~l~~~~~~ 320 (383)
.... ...+.. +|+|+++....... .+|+++ ..|.++...+. ..+... ..+.+..+++.||+.- ...
T Consensus 489 ~R~~-----h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G-G~~ 560 (695)
T 2zwa_A 489 TRFR-----HSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG-GGF 560 (695)
T ss_dssp CCBS-----CEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC-CBC
T ss_pred Cccc-----ceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC-CcC
Confidence 3221 234564 99999998765543 677776 89998765221 111112 2233333335667661 000
Q ss_pred CccccCCCcEEEEEeCCCCe------EEEEEEEe--ccCCCeeeEEEEE-ccccccccCC
Q 016752 321 EEDDDINRWELYWYDPQSQK------AADQVTIH--GVPQGCRDTLVCV-DSLVSLAAYA 371 (383)
Q Consensus 321 ~~~~~~~~~~~~~ydl~~~~------~~~~v~~~--~~~~~~~~~~~y~-~sl~~~~~~~ 371 (383)
+ +-......+..||+++++ |+ .+.-. ..... ..+..+. ..|+-+.+..
T Consensus 561 ~-~~~~~~~~v~~yd~~~~~w~~~~~W~-~~~~~p~~~R~~-~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 561 M-DQTTVSDKAIIFKYDAENATEPITVI-KKLQHPLFQRYG-SQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp T-TSSCBCCEEEEEEECTTCSSCCEEEE-EEEECGGGCCBS-CEEEEEETTEEEEECCBC
T ss_pred C-CCCeeeCcEEEEEccCCccccceEEE-EcCCCCCCCccc-ceEEEeCCCEEEEECCcc
Confidence 0 000113469999999999 88 76442 11222 4566666 6666666543
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=5e-05 Score=75.95 Aligned_cols=206 Identities=13% Similarity=0.043 Sum_probs=109.4
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCee
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYY 199 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~ 199 (383)
.+.++||.|++|..++..+..... ......+..| + +++.+... ....+++|+..++.|..+. .+|..
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~--~~~~~~~~~~---g--~lyv~GG~-----~~~~v~~yd~~t~~W~~~~-~~~~~ 286 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDM--FCPGISMDGN---G--QIVVTGGN-----DAKKTSLYDSSSDSWIPGP-DMQVA 286 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCC--SSCEEEECTT---S--CEEEECSS-----STTCEEEEEGGGTEEEECC-CCSSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCC--ccccccCCCC---C--CEEEeCCC-----CCCceEEecCcCCceeECC-CCCcc
Confidence 578999999999998876543211 1111112111 1 45555421 1236899999999999887 66542
Q ss_pred eecCCcceee-CceEEEEEecCCCCCCccEEEEEECCCceeeEec------CCCcCCcCCeeeeEEEEECCeEEEEEecC
Q 016752 200 ILHGWDGTFA-DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP------LPHLEDKKNVLVMFVGNFSGCLYFSCLCN 272 (383)
Q Consensus 200 ~~~~~~~v~~-~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~------~P~~~~~~~~~~~~L~~~~G~L~~~~~~~ 272 (383)
- .....+.+ +|++|.+.+...+......+..||+.+++|..++ +|.... . .+...+++++++....
T Consensus 287 R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~--~----~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 287 R-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK--Q----GLYRSDNHAWLFGWKK 359 (656)
T ss_dssp C-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT--T----GGGTTTCSCCEEECGG
T ss_pred c-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc--c----ceeecCCceEEEECCC
Confidence 1 11245666 9999999874322122334899999999999874 222110 0 1122344554444321
Q ss_pred -------CCCcEEEEEeC-CceeeeEEEcCC------CCceeEEEEEEeCCCEEEEEecc--CCCccccCCCcEEEEEeC
Q 016752 273 -------YPQPVDIWVLK-GCWTKAFSFHRS------VGDYVKALAYSKSEDKVLVDKFK--YGEEDDDINRWELYWYDP 336 (383)
Q Consensus 273 -------~~~~l~iW~l~-~~W~~~~~i~~~------~~~~~~~~~~~~~g~~v~l~~~~--~~~~~~~~~~~~~~~ydl 336 (383)
....+..|-.+ ..|......... -......+.+...++.|++.--. ..+.........+..||+
T Consensus 360 g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~ 439 (656)
T 1k3i_A 360 GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP 439 (656)
T ss_dssp GCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST
T ss_pred CcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC
Confidence 12256666666 777653322211 00011122222224566665100 000000000116889999
Q ss_pred CCCeEEEEEE
Q 016752 337 QSQKAADQVT 346 (383)
Q Consensus 337 ~~~~~~~~v~ 346 (383)
++++|. .+.
T Consensus 440 ~~~~W~-~~~ 448 (656)
T 1k3i_A 440 GTSPNT-VFA 448 (656)
T ss_dssp TSCCEE-EEC
T ss_pred CCCCee-EEc
Confidence 999999 663
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.35 E-value=3.1e-05 Score=70.49 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=36.3
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhcCChH
Q 016752 1 MAGLPTDINIDILSRLSIKCLLRFKCASKSFCSLIDSQE 39 (383)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~sl~r~r~VcK~W~~li~~~~ 39 (383)
+++||+|++.+||.+|+.+++.+++.|||+|+.+..+|.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 478999999999999999999999999999999987765
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.75 E-value=0.0002 Score=70.50 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=29.4
Q ss_pred CCCCcHHHHHHHHccCC-cccceeeeecchhhhhh
Q 016752 1 MAGLPTDINIDILSRLS-IKCLLRFKCASKSFCSL 34 (383)
Q Consensus 1 ~~~LP~Dll~eIL~rLP-~~sl~r~r~VcK~W~~l 34 (383)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.13 E-value=0.00081 Score=66.03 Aligned_cols=33 Identities=6% Similarity=0.056 Sum_probs=31.1
Q ss_pred CCCcHHHHHHHHccC-Ccccceeeeecchhhhhh
Q 016752 2 AGLPTDINIDILSRL-SIKCLLRFKCASKSFCSL 34 (383)
Q Consensus 2 ~~LP~Dll~eIL~rL-P~~sl~r~r~VcK~W~~l 34 (383)
+.||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 469999999999999 899999999999999887
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.84 Score=40.76 Aligned_cols=192 Identities=9% Similarity=0.104 Sum_probs=94.4
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..+.+...+-..... ......+.+.+..+.-.++... ....+.+|+..++.|.
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~l~s~~-------~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAHPKFGTILASCS-------YDGKVLIWKEENGRWS 92 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCGGGCSEEEEEE-------TTSCEEEEEEETTEEE
T ss_pred EEEEEECCCcEEEEecCCCcceeeeEecCC-----CCcEEEEEeCCCCCCCEEEEec-------cCCEEEEEEcCCCcee
Confidence 444444456688888764333322221111 1233345555432122333322 2346788999988876
Q ss_pred EeccCCCeeeecCCcceee--C--ceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE----
Q 016752 191 RIRVDFPYYILHGWDGTFA--D--GHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF---- 261 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~---- 261 (383)
... ..... ...-..+.+ + |.+...+..+. .|..+|+.+..- ..+.+.... .. -..+...
T Consensus 93 ~~~-~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~~~~~~~~~~~~~--~~--v~~~~~~~~~~ 160 (379)
T 3jrp_A 93 QIA-VHAVH-SASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA--IG--VNSASWAPATI 160 (379)
T ss_dssp EEE-EECCC-SSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCTTSCCCEEEEECCT--TC--EEEEEECCCC-
T ss_pred Eee-eecCC-CcceEEEEeCCCCCCCEEEEecCCC------cEEEEecCCCCceeeEEecCCC--Cc--eEEEEEcCccc
Confidence 654 21110 000022222 2 44444443332 488888876521 111111111 01 1112222
Q ss_pred ----------CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeC---CCEEEEEeccCCCcccc
Q 016752 262 ----------SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKS---EDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 262 ----------~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~---g~~v~l~~~~~~~~~~~ 325 (383)
+|.+.++..... .+.+|-+. ..|.....+..- .....-+.+.++ ++.++..
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~---------- 227 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASV---------- 227 (379)
T ss_dssp ---------CTTCEEEEEETTS--CEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEE----------
T ss_pred cccccccCCCCCCEEEEEeCCC--eEEEEEecCCCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEE----------
Confidence 467666666555 89999997 456666555431 123455666676 5544444
Q ss_pred CCCcEEEEEeCCCC
Q 016752 326 INRWELYWYDPQSQ 339 (383)
Q Consensus 326 ~~~~~~~~ydl~~~ 339 (383)
..++.+..||+.+.
T Consensus 228 ~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 228 SQDRTCIIWTQDNE 241 (379)
T ss_dssp ETTSCEEEEEESST
T ss_pred eCCCEEEEEeCCCC
Confidence 35667888888776
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.24 E-value=1.2 Score=37.91 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=77.2
Q ss_pred eeCceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-Cc
Q 016752 208 FADGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GC 285 (383)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~ 285 (383)
+.+|.||.-++.. ....|..+|+.+.+. ..+++|... + -.-+...+++|+.+.-.+. .+|+.+ ..
T Consensus 28 ~~~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~----f-geGi~~~~~~ly~ltw~~~----~v~v~D~~t 94 (243)
T 3mbr_X 28 YLRGHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPY----F-GAGIVAWRDRLIQLTWRNH----EGFVYDLAT 94 (243)
T ss_dssp EETTEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTC----C-EEEEEEETTEEEEEESSSS----EEEEEETTT
T ss_pred EECCEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCc----c-eeEEEEeCCEEEEEEeeCC----EEEEEECCc
Confidence 3456777655443 234699999988765 557787653 2 2235667899999865433 567777 55
Q ss_pred eeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 286 WTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
-.++.+++..- ...|+..+|+.+++. .....+..+|++|.+....+.+.
T Consensus 95 l~~~~ti~~~~----~Gwglt~dg~~L~vS----------dgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 95 LTPRARFRYPG----EGWALTSDDSHLYMS----------DGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp TEEEEEEECSS----CCCEEEECSSCEEEE----------CSSSEEEEECTTTCCEEEEEECE
T ss_pred CcEEEEEeCCC----CceEEeeCCCEEEEE----------CCCCeEEEEeCCCCeEEEEEEEc
Confidence 66677777521 245666778889998 35778999999998877566553
No 30
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.06 E-value=1.9 Score=38.87 Aligned_cols=191 Identities=12% Similarity=0.102 Sum_probs=103.6
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..+++....-..... ......+.+.|..+.+ ++... ....+.+|+..++..+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~-l~s~~-------~d~~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGP-----GDAITGMKFNQFNTNQ-LFVSS-------IRGATTLRDFSGSVIQ 154 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCST-----TCBEEEEEEETTEEEE-EEEEE-------TTTEEEEEETTSCEEE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCc-----CCceeEEEeCCCCCCE-EEEEe-------CCCEEEEEECCCCceE
Confidence 555554556799999988876654332111 2234456666533222 22222 2456788998876665
Q ss_pred EeccCCCeeeecCCcce--eeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EE
Q 016752 191 RIRVDFPYYILHGWDGT--FADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LY 266 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v--~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~ 266 (383)
... .... ....-..+ .-+|.....+..+ ..|..+|+..+....+..... . -..+... +|. +.
T Consensus 155 ~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~----~--v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 155 VFA-KTDS-WDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA----K--VTHAEFNPRCDWLM 220 (383)
T ss_dssp EEE-CCCC-SSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS----C--EEEEEECSSCTTEE
T ss_pred EEe-ccCC-CCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC----c--EEEEEECCCCCCEE
Confidence 554 1110 00000111 1245544433333 248889997666555543221 1 1123332 455 66
Q ss_pred EEEecCCCCcEEEEEeC-C--ceeeeEEEcCCCCceeEEEEEEe-CCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 267 FSCLCNYPQPVDIWVLK-G--CWTKAFSFHRSVGDYVKALAYSK-SEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 267 ~~~~~~~~~~l~iW~l~-~--~W~~~~~i~~~~~~~~~~~~~~~-~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+...... .+.||-+. . .-.....+.. .....-+.+.+ +|..|+.. ..++.+..||+++.+..
T Consensus 221 ~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~----------~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 221 ATSSVDA--TVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTT----------DQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEETTS--EEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEE----------ESSSEEEEEETTBTTSC
T ss_pred EEEeCCC--EEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEE----------cCCCcEEEEECCCCccc
Confidence 6665544 89999988 2 2333334443 23455677777 88777666 36789999999886653
No 31
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.71 E-value=1.9 Score=38.23 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=66.3
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecC-CCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC--Cc
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPL-PHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK--GC 285 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~--~~ 285 (383)
+|.+|....... ...|..||+.+++.+.+.. +.... .. ..++.. +|+..++..... ..+.+|.++ +.
T Consensus 50 dg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~-~p---~~~a~spdg~~l~~~~~~~-~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 50 KDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGT-PP---AYVAVDEARQLVYSANYHK-GTAEVMKIAADGA 120 (347)
T ss_dssp TCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESC-CC---SEEEEETTTTEEEEEETTT-TEEEEEEECTTSC
T ss_pred CCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCC-CC---EEEEECCCCCEEEEEeCCC-CEEEEEEeCCCCC
Confidence 788887765311 2349999998877765532 21111 11 134444 566444443222 289999996 55
Q ss_pred eeeeEEEcCC-CC-------ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC-CCeEE
Q 016752 286 WTKAFSFHRS-VG-------DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ-SQKAA 342 (383)
Q Consensus 286 W~~~~~i~~~-~~-------~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~-~~~~~ 342 (383)
......+... .+ ....-++++++|+ +++.. ..+..+..||+. ++++.
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~---------~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID---------LGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE---------TTTTEEEEEEECTTSCEE
T ss_pred eeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe---------CCCCEEEEEEECCCCcEE
Confidence 5555555431 00 1244577778888 66663 356689999988 66665
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.65 E-value=0.7 Score=42.91 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=96.1
Q ss_pred Ce-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
++ +|.....+..+.|||..+++...+-..... ......+.|.|..+.+ ++... ....+.+++.+++
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH-----~~~V~~l~f~p~~~~~-l~s~s-------~D~~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA-----GGSITGLKFNPLNTNQ-FYASS-------MEGTTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSS-----SCCCCEEEECSSCTTE-EEEEC-------SSSCEEEEETTSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCC-----CCCEEEEEEeCCCCCE-EEEEe-------CCCEEEEeeccCC
Confidence 44 555555667899999988875433222111 2234456777655543 22221 1345778888776
Q ss_pred ceEEeccCCCeeeecCCccee--eCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe
Q 016752 188 SWRRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC 264 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~ 264 (383)
.-+.....-.... ...++. -+|.+...+.... .|..+|+..+....+.... ... ..+... +|.
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~~~~~~h~----~~v--~~v~~~p~~~ 263 (435)
T 4e54_B 198 ILRVFASSDTINI--WFCSLDVSASSRMVVTGDNVG------NVILLNMDGKELWNLRMHK----KKV--THVALNPCCD 263 (435)
T ss_dssp EEEEEECCSSCSC--CCCCEEEETTTTEEEEECSSS------BEEEEESSSCBCCCSBCCS----SCE--EEEEECTTCS
T ss_pred ceeEEeccCCCCc--cEEEEEECCCCCEEEEEeCCC------cEeeeccCcceeEEEeccc----ceE--EeeeecCCCc
Confidence 5544431110000 001221 2454444433322 3888888765443322111 111 122322 343
Q ss_pred -EEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 265 -LYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 265 -L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.+...... .+.||-+. ..-.........-...+.-++++++|..|+.. ..++.+..||+.+....
T Consensus 264 ~~~~s~s~d~--~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~----------~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 264 WFLATASVDQ--TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT----------DQKSEIRVYSASQWDCP 331 (435)
T ss_dssp SEEEEEETTS--BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE----------ESSSCEEEEESSSSSSE
T ss_pred eEEEEecCcc--eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE----------cCCCEEEEEECCCCccc
Confidence 554554444 79999887 22111110000001223445566777776666 36778999999876544
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.97 E-value=1.6 Score=43.95 Aligned_cols=192 Identities=9% Similarity=0.101 Sum_probs=92.9
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..+++...+...... ......+.+.+..+.-.++... ....+.+|+..++.|.
T Consensus 23 ~latg~~dg~I~vwd~~~~~~~~~~~l~~h-----~~~V~~l~~s~~~~~~~l~s~s-------~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAHPKFGTILASCS-------YDGKVLIWKEENGRWS 90 (753)
T ss_dssp CEEEEETTTEEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCTTSCSEEEEEE-------TTSCEEEEEEETTEEE
T ss_pred eEEEEECCCcEEEEecCCCCCccceeccCC-----cCceEEEEecCCCCCCEEEEEe-------CCCeEEEEECCCCccc
Confidence 344333455677888764443333222111 1234456666543222333332 2356788998888876
Q ss_pred EeccCCCeeeecCCcceee--C--ceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE----
Q 016752 191 RIRVDFPYYILHGWDGTFA--D--GHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF---- 261 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~---- 261 (383)
... ..... ...-..+.+ + |.+...+..+. .|..+|+.+..- ..+.+.... .. -..+...
T Consensus 91 ~~~-~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~~~~~~~~~~~~~--~~--v~~l~~~p~~~ 158 (753)
T 3jro_A 91 QIA-VHAVH-SASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA--IG--VNSASWAPATI 158 (753)
T ss_dssp EEE-EECCC-SSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSSSCCCCEEEECCS--SC--EEEEEECCCC-
T ss_pred ccc-cccCC-CCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecCCCcceeEeecCC--Cc--eEEEEecCccc
Confidence 654 11100 000022222 2 44444444332 488888876521 111111111 00 0112211
Q ss_pred ----------CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeC---CCEEEEEeccCCCcccc
Q 016752 262 ----------SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKS---EDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 262 ----------~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~---g~~v~l~~~~~~~~~~~ 325 (383)
+|.+.++..... .+.+|-+. ..+.....+.. -.....-+.++++ |+.++..
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~l~s~---------- 225 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASV---------- 225 (753)
T ss_dssp --------CGGGCCEEEEETTS--CEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEE----------
T ss_pred ccccccccCCCCCEEEEEECCC--eEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCEEEEE----------
Confidence 356666665555 79999987 45555555543 1123445666666 5544444
Q ss_pred CCCcEEEEEeCCCC
Q 016752 326 INRWELYWYDPQSQ 339 (383)
Q Consensus 326 ~~~~~~~~ydl~~~ 339 (383)
..++.+..||+.++
T Consensus 226 s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 226 SQDRTCIIWTQDNE 239 (753)
T ss_dssp ESSSCEEEEEESSS
T ss_pred ecCCEEEEecCCCC
Confidence 35667888888775
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.96 E-value=2 Score=36.98 Aligned_cols=114 Identities=14% Similarity=0.097 Sum_probs=76.1
Q ss_pred eeCceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-Cc
Q 016752 208 FADGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GC 285 (383)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~ 285 (383)
+.+|.||.-++... ...|..+|+.+.+. ..+++|... + -.-+...+++|+.+.-.+. .+|+.+ ..
T Consensus 50 ~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~----F-geGit~~g~~ly~ltw~~~----~v~v~D~~t 116 (262)
T 3nol_A 50 YRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRY----F-GEGISDWKDKIVGLTWKNG----LGFVWNIRN 116 (262)
T ss_dssp EETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTC----C-EEEEEEETTEEEEEESSSS----EEEEEETTT
T ss_pred EECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCcc----c-eeEEEEeCCEEEEEEeeCC----EEEEEECcc
Confidence 34778887665542 34599999998764 557776543 2 2235667889988865433 567777 55
Q ss_pred eeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 286 WTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
-.++.+++..- ...++..+|+.+++. .....+..+|++|.++...+.+.
T Consensus 117 ~~~~~ti~~~~----eG~glt~dg~~L~~S----------dGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 117 LRQVRSFNYDG----EGWGLTHNDQYLIMS----------DGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp CCEEEEEECSS----CCCCEEECSSCEEEC----------CSSSEEEEECTTTCSEEEEEECE
T ss_pred CcEEEEEECCC----CceEEecCCCEEEEE----------CCCCeEEEEcCCCCeEEEEEEec
Confidence 56666777521 234666678888888 25678999999997777566553
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.63 E-value=3.6 Score=36.44 Aligned_cols=198 Identities=10% Similarity=0.035 Sum_probs=97.3
Q ss_pred eeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCC-CCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 110 GLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVN-DDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 110 GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~-~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
.+|+....+..+.|||..++++..+-..... ......+.+.+.. +.+ ++... ....+.+|+..++.
T Consensus 70 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~-l~~~~-------~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 70 TILASCSYDGKVLIWKEENGRWSQIAVHAVH-----SASVNSVQWAPHEYGPL-LLVAS-------SDGKVSVVEFKENG 136 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCGGGCSE-EEEEE-------TTSEEEEEECCTTS
T ss_pred CEEEEeccCCEEEEEEcCCCceeEeeeecCC-----CcceEEEEeCCCCCCCE-EEEec-------CCCcEEEEecCCCC
Confidence 3444444566899999988864433222211 1234456666653 333 33322 24567888887752
Q ss_pred -eEEecc-CC--C-eeeecCCcce--------eeCceEEEEEecCCCCCCccEEEEEECCCce--eeEe-cCCCcCCcCC
Q 016752 189 -WRRIRV-DF--P-YYILHGWDGT--------FADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEV-PLPHLEDKKN 252 (383)
Q Consensus 189 -Wr~~~~-~~--p-~~~~~~~~~v--------~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i-~~P~~~~~~~ 252 (383)
...... .. + .......... .-+|.+...+..+. .|..+|+.+.. +..+ .+..+. .
T Consensus 137 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~---~ 207 (379)
T 3jrp_A 137 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHS---D 207 (379)
T ss_dssp CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCS---S
T ss_pred ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEeccc---C
Confidence 211110 00 0 0000000000 00355444444332 37788875543 3322 122211 1
Q ss_pred eeeeEEEEE-C---CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC--CCceeEEEEEEeCCCEEEEEeccCCCcccc
Q 016752 253 VLVMFVGNF-S---GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS--VGDYVKALAYSKSEDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 253 ~~~~~L~~~-~---G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~--~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~ 325 (383)
. -..+... + |.+.+...... .+.||.++ +.......+... ......-+.++++|..|+..
T Consensus 208 ~-v~~~~~sp~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~---------- 274 (379)
T 3jrp_A 208 W-VRDVAWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS---------- 274 (379)
T ss_dssp C-EEEEEECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE----------
T ss_pred c-EeEEEECCCCCCCCeEEEEeCCC--EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe----------
Confidence 1 1123332 3 56666666555 79999998 332222222211 22345566777888877776
Q ss_pred CCCcEEEEEeCC-CCeEE
Q 016752 326 INRWELYWYDPQ-SQKAA 342 (383)
Q Consensus 326 ~~~~~~~~ydl~-~~~~~ 342 (383)
..++.+..||+. .++++
T Consensus 275 ~~dg~i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 275 GGDNKVTLWKENLEGKWE 292 (379)
T ss_dssp ESSSSEEEEEEEETTEEE
T ss_pred cCCCcEEEEeCCCCCccc
Confidence 367789999987 44555
No 36
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.05 E-value=2.1 Score=37.07 Aligned_cols=112 Identities=8% Similarity=-0.003 Sum_probs=72.6
Q ss_pred ceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-Cceee
Q 016752 211 GHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTK 288 (383)
Q Consensus 211 G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~ 288 (383)
|.+|.-.+... ...|..+|+.+.+- ..+++|... + -.-++..+++|+++...+. .+++.+ ..-..
T Consensus 32 g~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~----f-geGi~~~g~~lyv~t~~~~----~v~viD~~t~~v 98 (266)
T 2iwa_A 32 DTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSY----F-GEGLTLLNEKLYQVVWLKN----IGFIYDRRTLSN 98 (266)
T ss_dssp TEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTC----C-EEEEEEETTEEEEEETTCS----EEEEEETTTTEE
T ss_pred CeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCc----c-eEEEEEeCCEEEEEEecCC----EEEEEECCCCcE
Confidence 67777654321 23599999987664 556776532 1 1234556788888875433 466677 55566
Q ss_pred eEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 289 AFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 289 ~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
+.+|+... ....++..+|+.+|+. .....+..+|++|.+....+.+.
T Consensus 99 ~~~i~~g~---~~g~glt~Dg~~l~vs----------~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 99 IKNFTHQM---KDGWGLATDGKILYGS----------DGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp EEEEECCS---SSCCEEEECSSSEEEE----------CSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEECCC---CCeEEEEECCCEEEEE----------CCCCeEEEEECCCCcEEEEEEEC
Confidence 66776421 1235677788889988 35679999999998876566543
No 37
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.70 E-value=4.7 Score=35.12 Aligned_cols=140 Identities=7% Similarity=-0.027 Sum_probs=71.3
Q ss_pred cEEEEEEcC--CCceEEeccCCCeeeecCCccee--eCceEEEEEecCCCCCCccEEEEEECCCc-eee---EecCCCcC
Q 016752 177 TEVSVYSLR--SNSWRRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPKDDIENLIVAFNLESE-EFQ---EVPLPHLE 248 (383)
Q Consensus 177 ~~~~vyss~--~~~Wr~~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~il~fD~~~e-~~~---~i~~P~~~ 248 (383)
..+.+|+.. ++.++.+. ..+... ....+. -+|...+...... ..|..+|+.++ ... .++.....
T Consensus 60 ~~v~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~ 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAA-ESALPG--SLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGC 131 (343)
T ss_dssp TEEEEEEECTTTCCEEEEE-EEECSS--CCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTB
T ss_pred CeEEEEEecCCCCceeecc-ccccCC--CCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCc
Confidence 577888887 67777654 221111 112222 2565333333321 23777887322 222 22221111
Q ss_pred CcCCeeeeEEEEE-CCeEEEEEe-cCCCCcEEEEEeC--CceeeeE--EEcCCCCceeEEEEEEeCCCEEEEEeccCCCc
Q 016752 249 DKKNVLVMFVGNF-SGCLYFSCL-CNYPQPVDIWVLK--GCWTKAF--SFHRSVGDYVKALAYSKSEDKVLVDKFKYGEE 322 (383)
Q Consensus 249 ~~~~~~~~~L~~~-~G~L~~~~~-~~~~~~l~iW~l~--~~W~~~~--~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~ 322 (383)
. .+... +|+..++.. ... .+.+|.++ +...... .+....+....-+.++++|+.+++..
T Consensus 132 --~-----~~~~s~dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~------ 196 (343)
T 1ri6_A 132 --H-----SANISPDNRTLWVPALKQD--RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN------ 196 (343)
T ss_dssp --C-----CCEECTTSSEEEEEEGGGT--EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE------
T ss_pred --e-----EEEECCCCCEEEEecCCCC--EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe------
Confidence 1 12222 455334443 333 78999987 5555444 33322223345567778888777773
Q ss_pred cccCCCcEEEEEeCC--CCeEE
Q 016752 323 DDDINRWELYWYDPQ--SQKAA 342 (383)
Q Consensus 323 ~~~~~~~~~~~ydl~--~~~~~ 342 (383)
..+..+..||+. +++++
T Consensus 197 ---~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 197 ---ELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp ---TTTTEEEEEESSCTTSCCE
T ss_pred ---CCCCEEEEEEecCCCCcEE
Confidence 356789999984 45544
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.41 E-value=2.6 Score=36.43 Aligned_cols=109 Identities=11% Similarity=-0.038 Sum_probs=72.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-Ccee
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWT 287 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~ 287 (383)
+|.||.-++... .|..+|+++.+. ..+ +|... + -.-+...+++|+.+...+. .+|+.+ .+-.
T Consensus 64 ~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~----F-geGit~~g~~Ly~ltw~~~----~v~V~D~~Tl~ 127 (268)
T 3nok_A 64 QGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNI----F-AEGLASDGERLYQLTWTEG----LLFTWSGMPPQ 127 (268)
T ss_dssp TTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTC----C-EEEEEECSSCEEEEESSSC----EEEEEETTTTE
T ss_pred CCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCc----c-eeEEEEeCCEEEEEEccCC----EEEEEECCcCc
Confidence 567776655443 299999988765 445 66532 2 2235667889988865433 667777 5566
Q ss_pred eeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 288 KAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 288 ~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
++.+|+.. ....|+..+|+.+++. .....+..+|++|.++...+.+.
T Consensus 128 ~~~ti~~~----~eGwGLt~Dg~~L~vS----------dGs~~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 128 RERTTRYS----GEGWGLCYWNGKLVRS----------DGGTMLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp EEEEEECS----SCCCCEEEETTEEEEE----------CSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEEeCC----CceeEEecCCCEEEEE----------CCCCEEEEEcCCCCeEEEEEEeC
Confidence 66777752 1135666678889988 35779999999998877566653
No 39
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.35 E-value=5.8 Score=35.38 Aligned_cols=210 Identities=12% Similarity=0.044 Sum_probs=102.0
Q ss_pred CcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 107 SCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
+.++.|+....+..+.|||..|++.......... . +......+.+.+.. .+ ++... ....+.+++..+
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~--~-H~~~V~~v~~spdg-~~-l~sgs-------~d~~i~iwd~~~ 158 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKY--E-HDDIVSTVSVLSSG-TQ-AVSGS-------KDICIKVWDLAQ 158 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEE--C-CSSCEEEEEECTTS-SE-EEEEE-------TTSCEEEEETTT
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeecccc--C-CCCCEEEEEECCCC-CE-EEEEe-------CCCeEEEEECCC
Confidence 3456666666667899999998875433321110 0 01233456666633 33 22222 234577888877
Q ss_pred CceE-EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-
Q 016752 187 NSWR-RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 187 ~~Wr-~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~- 261 (383)
+.=. ... ..... -..+.+ +|.-+.+....+ ..|..+|+.+.+.. .+..+... .. ...+...
T Consensus 159 ~~~~~~~~-~h~~~----V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~--~~--~~~~~~~p 224 (344)
T 4gqb_B 159 QVVLSSYR-AHAAQ----VTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPG--YL--PTSLAWHP 224 (344)
T ss_dssp TEEEEEEC-CCSSC----EEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----C--CC--EEEEEECS
T ss_pred CcEEEEEc-CcCCc----eEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceee--cc--ceeeeecC
Confidence 6321 111 00000 012222 343222332221 13888999876543 33322211 11 1123332
Q ss_pred -CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 262 -SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 262 -~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
++.+.+...... .+.||-++ ++ .+.++.. -.....-++++++|+.++... ..++.+.+||.+++
T Consensus 225 ~~~~~l~sg~~dg--~v~~wd~~~~~--~~~~~~~-h~~~v~~v~fsp~g~~~lasg---------s~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 225 QQSEVFVFGDENG--TVSLVDTKSTS--CVLSSAV-HSQCVTGLVFSPHSVPFLASL---------SEDCSLAVLDSSLS 290 (344)
T ss_dssp SCTTEEEEEETTS--EEEEEESCC----CCEEEEC-CSSCEEEEEECSSSSCCEEEE---------ETTSCEEEECTTCC
T ss_pred CCCcceEEeccCC--cEEEEECCCCc--EEEEEcC-CCCCEEEEEEccCCCeEEEEE---------eCCCeEEEEECCCC
Confidence 456666555444 89999887 32 2233332 113345667777775444431 35678999999999
Q ss_pred eEEEEEEEeccCCCeeeEEEE
Q 016752 340 KAADQVTIHGVPQGCRDTLVC 360 (383)
Q Consensus 340 ~~~~~v~~~~~~~~~~~~~~y 360 (383)
++. + ..|.... ...+.|
T Consensus 291 ~~~-~--~~~H~~~-V~~v~~ 307 (344)
T 4gqb_B 291 ELF-R--SQAHRDF-VRDATW 307 (344)
T ss_dssp EEE-E--ECCCSSC-EEEEEE
T ss_pred cEE-E--EcCCCCC-EEEEEE
Confidence 876 4 3444433 334444
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.35 E-value=6.3 Score=35.73 Aligned_cols=191 Identities=14% Similarity=0.087 Sum_probs=98.8
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
++.++....+..+.|||..+++...+-.... ......+.+.+. +.+-+++ . ....+.+|+..++.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~------~~~v~~v~~s~~-~~~l~~~-~-------~dg~i~iwd~~~~~ 167 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE------STYVASVKWSHD-GSFLSVG-L-------GNGLVDIYDVESQT 167 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT------TCCEEEEEECTT-SSEEEEE-E-------TTSCEEEEETTTCC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC------CCCEEEEEECCC-CCEEEEE-C-------CCCeEEEEECcCCe
Confidence 3434444455689999999998776544321 123445667663 3333222 1 23467888888764
Q ss_pred eEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEecCCCcCCcCCeeeeEEEEE-CCeE
Q 016752 189 WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEVPLPHLEDKKNVLVMFVGNF-SGCL 265 (383)
Q Consensus 189 Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~~~-~G~L 265 (383)
-...-.... ..-..+.++|.+...+..+. .|..+|+.... ...+..... . -..+... +|.+
T Consensus 168 ~~~~~~~~~----~~v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~----~--v~~~~~~~~~~~ 231 (401)
T 4aez_A 168 KLRTMAGHQ----ARVGCLSWNRHVLSSGSRSG------AIHHHDVRIANHQIGTLQGHSS----E--VCGLAWRSDGLQ 231 (401)
T ss_dssp EEEEECCCS----SCEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECCSS----C--EEEEEECTTSSE
T ss_pred EEEEecCCC----CceEEEEECCCEEEEEcCCC------CEEEEecccCcceeeEEcCCCC----C--eeEEEEcCCCCE
Confidence 322110100 00134455666555444432 48899987432 222221111 1 1123332 5666
Q ss_pred EEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 266 YFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+...... .+.+|-++ +. ....+.. -......+.+.++++.++...- + ..++.+..||+.+++..
T Consensus 232 l~s~~~d~--~v~iwd~~~~~--~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~--g-----s~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 232 LASGGNDN--VVQIWDARSSI--PKFTKTN-HNAAVKAVAWCPWQSNLLATGG--G-----TMDKQIHFWNAATGARV 297 (401)
T ss_dssp EEEEETTS--CEEEEETTCSS--EEEEECC-CSSCCCEEEECTTSTTEEEEEC--C-----TTTCEEEEEETTTCCEE
T ss_pred EEEEeCCC--eEEEccCCCCC--ccEEecC-CcceEEEEEECCCCCCEEEEec--C-----CCCCEEEEEECCCCCEE
Confidence 66665544 79999987 32 2222321 1123445666666655555410 0 14678999998887765
No 41
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.58 E-value=8 Score=35.31 Aligned_cols=200 Identities=14% Similarity=0.158 Sum_probs=100.3
Q ss_pred eeeee-CcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEE
Q 016752 102 TPIID-SCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVS 180 (383)
Q Consensus 102 ~~~~~-s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 180 (383)
..+++ |.+++|.+.. +..++|||..|++...+-..... ......+.|.+. +.|-+++- ....+.
T Consensus 108 ~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~-----~~~V~sv~fspd-g~~lasgs--------~Dg~v~ 172 (420)
T 4gga_A 108 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP-----GEYISSVAWIKE-GNYLAVGT--------SSAEVQ 172 (420)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST-----TCCEEEEEECTT-SSEEEEEE--------TTSCEE
T ss_pred ceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC-----CCcEEEEEECCC-CCEEEEEE--------CCCeEE
Confidence 34444 4567776654 56899999999988765433222 223445677763 33433321 245678
Q ss_pred EEEcCCCceE-EeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEE
Q 016752 181 VYSLRSNSWR-RIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVG 259 (383)
Q Consensus 181 vyss~~~~Wr-~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~ 259 (383)
+|+..++.-- ... ... .....+..+|.+-..+... ..+..+|..........+..+.. . ...+.
T Consensus 173 iWd~~~~~~~~~~~-~h~----~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~~--~--~~~~~ 237 (420)
T 4gga_A 173 LWDVQQQKRLRNMT-SHS----ARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQ--E--VCGLR 237 (420)
T ss_dssp EEETTTTEEEEEEC-CCS----SCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS--C--EEEEE
T ss_pred EEEcCCCcEEEEEe-CCC----CceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccccc--c--eeeee
Confidence 8888876421 111 100 0012344555544433332 24777777654433222221111 1 11222
Q ss_pred E-ECCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCC-CEEEEEeccCCCccccCCCcEEEEE
Q 016752 260 N-FSGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSE-DKVLVDKFKYGEEDDDINRWELYWY 334 (383)
Q Consensus 260 ~-~~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g-~~v~l~~~~~~~~~~~~~~~~~~~y 334 (383)
. -+|...+...... .+.||... ..+........ .......+++.+++ ..+..... ..++.+..|
T Consensus 238 ~~~~g~~l~s~~~D~--~v~i~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~p~~~~~la~~~g--------s~D~~I~iw 306 (420)
T 4gga_A 238 WAPDGRHLASGGNDN--LVNVWPSAPGEGGWVPLQTFTQ-HQGAVKAVAWCPWQSNVLATGGG--------TSDRHIRIW 306 (420)
T ss_dssp ECTTSSEEEEEETTS--CEEEEESSCCSSCSCCSEEECC-CSSCEEEEEECTTCTTEEEEEEC--------TTTCEEEEE
T ss_pred ecCCCCeeeeeeccc--cceEEeeccccccceeeeeecc-cCCceeeeeeCCCcccEEEEEee--------cCCCEEEEE
Confidence 2 2466555555444 78999887 23333333322 11234445555543 33333310 245678888
Q ss_pred eCCCCeEE
Q 016752 335 DPQSQKAA 342 (383)
Q Consensus 335 dl~~~~~~ 342 (383)
|+.+++..
T Consensus 307 d~~t~~~~ 314 (420)
T 4gga_A 307 NVCSGACL 314 (420)
T ss_dssp ETTTTEEE
T ss_pred eCCccccc
Confidence 88888766
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.55 E-value=6.5 Score=34.22 Aligned_cols=179 Identities=12% Similarity=0.048 Sum_probs=97.0
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCce--EEecc
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSW--RRIRV 194 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~W--r~~~~ 194 (383)
....+.++|+.|++....-..+. . .. ++.+++..+ + ++.... ....+.+++..++.- +....
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~------~-~~-~~~~s~dg~-~-l~~~~~------~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGY------D-FV-DTAITSDCS-N-VVVTSD------FCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCC------C-EE-EEEECSSSC-E-EEEEES------TTCEEEEEECSSSSCEEEEEEE
T ss_pred CCCeEEEEeCcccceeeeEEccC------C-cc-eEEEcCCCC-E-EEEEeC------CCCeEEEEECCCCceeEEeccc
Confidence 45679999999988754432221 1 12 577776543 3 333221 234778888887763 22210
Q ss_pred -CCCeeeecCCccee--eCce-EEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CCe-EEE
Q 016752 195 -DFPYYILHGWDGTF--ADGH-VHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SGC-LYF 267 (383)
Q Consensus 195 -~~p~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~-L~~ 267 (383)
..|. .++. -+|. +| ...... ....|..+|+.+.+... ++.+.. ...+... +|+ |++
T Consensus 82 ~~~~~------~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~~-------~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 82 GQSSM------ADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPIPYD-------AVGIAISPNGNGLIL 144 (331)
T ss_dssp CSSCC------CCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEECCTT-------EEEEEECTTSSCEEE
T ss_pred CCCCc------cceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEECCCC-------ccceEECCCCCEEEE
Confidence 1111 1122 2454 44 322221 11259999998776533 333221 1123333 565 665
Q ss_pred EEecCCCCc-EEEEEeC--Cceeee--EEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 268 SCLCNYPQP-VDIWVLK--GCWTKA--FSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 268 ~~~~~~~~~-l~iW~l~--~~W~~~--~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
...... . +.+|.++ +.-... ..+. .+....-+.++++|+.+++.. ..+..+..||+++++.
T Consensus 145 ~~~~~~--~~i~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~---------~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 145 IDRSSA--NTVRRFKIDADGVLFDTGQEFIS--GGTRPFNITFTPDGNFAFVAN---------LIGNSIGILETQNPEN 210 (331)
T ss_dssp EEETTT--TEEEEEEECTTCCEEEEEEEEEC--SSSSEEEEEECTTSSEEEEEE---------TTTTEEEEEECSSTTS
T ss_pred EecCCC--ceEEEEEECCCCcEeecCCcccc--CCCCccceEECCCCCEEEEEe---------CCCCeEEEEECCCCcc
Confidence 555434 5 9999998 322222 2222 223355667788888788873 3567899999998885
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.51 E-value=7 Score=34.51 Aligned_cols=205 Identities=13% Similarity=0.072 Sum_probs=103.9
Q ss_pred CeeEEEecC-----CCcEEEEcCCccceee-cCCC--CCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEE
Q 016752 109 NGLIALKND-----ENGIAFWNPSTKEHLI-LPKF--WGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVS 180 (383)
Q Consensus 109 ~GLll~~~~-----~~~~~V~NP~T~~~~~-LP~~--~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 180 (383)
+|++.+... ...+.++||.|++... ++.. .... ......+.++. + ++..... ....+.
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~l----g~~~~~i~~~~---~-~lyv~~~------~~~~v~ 67 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKL----GDVAQSMVIRD---G-IGWIVVN------NSHVIF 67 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCC----BSCEEEEEEET---T-EEEEEEG------GGTEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCccc----CccceEEEEEC---C-EEEEEEc------CCCEEE
Confidence 566666654 5689999999998753 2110 0000 11112233442 2 2333321 245788
Q ss_pred EEEcCCCce-EEecc-CCCeeeecCCccee--eCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeee
Q 016752 181 VYSLRSNSW-RRIRV-DFPYYILHGWDGTF--ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLV 255 (383)
Q Consensus 181 vyss~~~~W-r~~~~-~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~ 255 (383)
+++..++.- +.++. ..| ..+. -+|.+|...... ..|.++|+.+.+.. .++.+........ .
T Consensus 68 viD~~t~~~~~~i~~~~~p-------~~i~~~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~~~~~-p 133 (328)
T 3dsm_A 68 AIDINTFKEVGRITGFTSP-------RYIHFLSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDMESGS-T 133 (328)
T ss_dssp EEETTTCCEEEEEECCSSE-------EEEEEEETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCTTTCB-C
T ss_pred EEECcccEEEEEcCCCCCC-------cEEEEeCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccccCCC-c
Confidence 899888754 22220 112 2222 478888766332 24999999988764 5665541100000 1
Q ss_pred eEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccC-CCccccCCCcEEEE
Q 016752 256 MFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKY-GEEDDDINRWELYW 333 (383)
Q Consensus 256 ~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~-~~~~~~~~~~~~~~ 333 (383)
..++..+|+|++...... ..+.++-++ ++..+ ++.. +....-+.+.++| .+++..... .+..+......++.
T Consensus 134 ~~i~~~~~~lyv~~~~~~-~~v~viD~~t~~~~~--~i~~--g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 134 EQMVQYGKYVYVNCWSYQ-NRILKIDTETDKVVD--ELTI--GIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp CCEEEETTEEEEEECTTC-CEEEEEETTTTEEEE--EEEC--SSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred ceEEEECCEEEEEcCCCC-CEEEEEECCCCeEEE--EEEc--CCCccceEEcCCC-CEEEEECCCccCCccccCCceEEE
Confidence 124447888888764212 256665555 44333 4443 1112234455665 466663110 00000000268999
Q ss_pred EeCCCCeEEEEEEE
Q 016752 334 YDPQSQKAADQVTI 347 (383)
Q Consensus 334 ydl~~~~~~~~v~~ 347 (383)
+|++++++...+.+
T Consensus 208 id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 208 IDAETFTVEKQFKF 221 (328)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCeEEEEEec
Confidence 99999988744443
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.99 E-value=2.6 Score=37.64 Aligned_cols=186 Identities=10% Similarity=0.127 Sum_probs=84.4
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc-eEEeccC
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS-WRRIRVD 195 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~-Wr~~~~~ 195 (383)
.+..+.|||..++.+..+-..... ......+.+.+.. ++ ++... ....+.+|+..++. |......
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~s~~~-~~-l~s~s-------~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDH-----DKIVTCVDWAPKS-NR-IVTCS-------QDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCC-----SSCEEEEEECTTT-CC-EEEEE-------TTSSEEEC------CCCCEEEC
T ss_pred CCCEEEEEEccCCceEEEEEEecC-----CceEEEEEEeCCC-CE-EEEEe-------CCCeEEEEEcCCCCceeeeeEe
Confidence 456788999988754444333222 2234456666643 22 22222 13457788887765 5433211
Q ss_pred CCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCce----eeEecCCCcCCcCCeeeeEEEEE-CCeEEEE
Q 016752 196 FPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEE----FQEVPLPHLEDKKNVLVMFVGNF-SGCLYFS 268 (383)
Q Consensus 196 ~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~ 268 (383)
.... ..-..+.+ +|.....+..+. .|..+|+.+.. ...+..|.. .. -..+... +|.+.+.
T Consensus 97 ~~~~--~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~----~~-v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 97 LRLN--RAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLR----ST-ILSLDWHPNNVLLAA 163 (377)
T ss_dssp CCCS--SCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCC----SC-EEEEEECTTSSEEEE
T ss_pred cccC--CceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccC----CC-eEEEEEcCCCCEEEE
Confidence 0000 00011222 444333333322 27888887764 333333211 11 1123332 5666666
Q ss_pred EecCCCCcEEEEEeC----------Cceeee---EEEcCCCC--ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEE
Q 016752 269 CLCNYPQPVDIWVLK----------GCWTKA---FSFHRSVG--DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYW 333 (383)
Q Consensus 269 ~~~~~~~~l~iW~l~----------~~W~~~---~~i~~~~~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ 333 (383)
..... .+.+|-++ ..|... ..+-..++ ....-+.+.++|..|+.. ..++.+..
T Consensus 164 ~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~----------~~d~~i~i 231 (377)
T 3dwl_C 164 GCADR--KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA----------GHDSSVTI 231 (377)
T ss_dssp EESSS--CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE----------ETTTEEC-
T ss_pred EeCCC--EEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE----------eCCCcEEE
Confidence 55544 79999985 122211 11110011 235556777787766666 36778999
Q ss_pred EeCCCCeE
Q 016752 334 YDPQSQKA 341 (383)
Q Consensus 334 ydl~~~~~ 341 (383)
||+++++.
T Consensus 232 wd~~~~~~ 239 (377)
T 3dwl_C 232 AYPSAPEQ 239 (377)
T ss_dssp CEECSTTS
T ss_pred EECCCCCC
Confidence 99888764
No 45
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=90.49 E-value=3.9 Score=37.43 Aligned_cols=123 Identities=16% Similarity=0.122 Sum_probs=75.3
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEe---c-CC-----CcCCcCCeeeeEEEEE--CCeEEEEEecC-----C
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEV---P-LP-----HLEDKKNVLVMFVGNF--SGCLYFSCLCN-----Y 273 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i---~-~P-----~~~~~~~~~~~~L~~~--~G~L~~~~~~~-----~ 273 (383)
+|.++|....+ .+.++|+.++.-..+ . +. ....-.+. ..++.. +++|++..... .
T Consensus 237 dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~--q~~a~~~~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 237 AGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW--QQVAYHRALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp TTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS--SCEEEETTTTEEEEEEEECCTTCTT
T ss_pred CCcEEEEeCCC-------EEEEEECCCCcceeecceeccccccccccccCCCc--ceeeECCCCCeEEEEeccccccccC
Confidence 78888976643 399999987753322 1 10 01000011 113333 46777765321 1
Q ss_pred CCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCC-EEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEeccC
Q 016752 274 PQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSED-KVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGVP 351 (383)
Q Consensus 274 ~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~~ 351 (383)
...=+||+++ ..+..+.+|+. +....-+++++||+ .+|... ..++.+..||..+++....+...+.+
T Consensus 308 ~~~~~V~viD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn---------~~~~~VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 308 TASRFVVVLDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALS---------TGDKTLYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp SCEEEEEEEETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEE---------TTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred CCCCEEEEEECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEc---------CCCCeEEEEECCCCcEEEEecCCCCC
Confidence 1146899999 88888888875 23344577788886 666652 35678999999999988566555554
Q ss_pred C
Q 016752 352 Q 352 (383)
Q Consensus 352 ~ 352 (383)
.
T Consensus 377 ~ 377 (386)
T 3sjl_D 377 P 377 (386)
T ss_dssp C
T ss_pred c
Confidence 3
No 46
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.35 E-value=17 Score=36.82 Aligned_cols=178 Identities=13% Similarity=0.064 Sum_probs=98.5
Q ss_pred EEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCc
Q 016752 150 DGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIE 226 (383)
Q Consensus 150 ~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~ 226 (383)
.++++|...+ +|+.... ....++++++....-+.+. ... .....++.+ +|.|||..... .
T Consensus 474 ~GLAvD~~~~--~LY~tD~------~~~~I~v~~ldG~~~~~l~-~~~---l~~P~gIaVDp~~g~LYwtD~g~-----~ 536 (791)
T 3m0c_C 474 DGLAVDWIHS--NIYWTDS------VLGTVSVADTKGVKRKTLF-REN---GSKPRAIVVDPVHGFMYWTDWGT-----P 536 (791)
T ss_dssp CEEEEETTTT--EEEEEET------TTTEEEEEETTSSSEEEEE-ECT---TCCEEEEEEETTTTEEEEEECSS-----S
T ss_pred ceeeeeecCC--cEEEEec------CCCeEEEEeCCCCeEEEEE-eCC---CCCcceEEEecCCCCEEEecCCC-----C
Confidence 4677776554 3444331 2457788887765544442 100 011135555 58999987432 1
Q ss_pred cEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEE
Q 016752 227 NLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKA 302 (383)
Q Consensus 227 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~ 302 (383)
..|..+++....-..+-. .... . -..|++. +|+||++..... .||..+ +.-.+.. +.. -.....|
T Consensus 537 ~~I~~~~~dG~~~~~lv~-~~l~-~---P~GLavD~~~~~LYwaD~~~~----~I~~~d~dG~~~~~v-~~~-~~~l~~P 605 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVT-ENIQ-W---PNGITLDLLSGRLYWVDSKLH----SISSIDVNGGNRKTI-LED-EKRLAHP 605 (791)
T ss_dssp CEEEEEETTSCCEEEEEC-SSCS-C---EEEEEEETTTTEEEEEETTTT----EEEEEETTSCSCEEE-EEC-TTTTSSE
T ss_pred CeEEEEecCCCceEEEEe-CCCC-C---ceEEEEecCCCeEEEEeCCCC----cEEEEecCCCceEEE-ecC-CCccCCC
Confidence 359999997665544321 1111 1 1234544 788998865332 455554 4333222 111 0123457
Q ss_pred EEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEeccCCCeeeEEEEEccccc
Q 016752 303 LAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 303 ~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~~~~~~~~~~y~~sl~~ 366 (383)
+++...++.||+.. .....|..+|..+++-. .+-..+...- +.+.+|.+...+
T Consensus 606 ~glav~~~~lYwtD---------~~~~~I~~~dk~tG~~~-~~l~~~l~~P-~~i~v~h~~~Qp 658 (791)
T 3m0c_C 606 FSLAVFEDKVFWTD---------IINEAIFSANRLTGSDV-NLLAENLLSP-EDMVLFHNLTQP 658 (791)
T ss_dssp EEEEEETTEEEEEE---------TTTTEEEEEETTTCCCC-EEEECSCSCC-CCEEEESGGGSC
T ss_pred CEEEEeCCEEEEEE---------CCCCEEEEEeCCCCcce-EEeecCCCCc-eeEeeeccccCC
Confidence 77776677899885 46678999998777555 3323444333 577788776654
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.06 E-value=10 Score=33.87 Aligned_cols=195 Identities=12% Similarity=0.049 Sum_probs=89.0
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+|.++.......+.|||..+++........... .......+.+.|.. .+ ++... ....+.+|+..++
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~---h~~~V~~v~~spdg-~~-l~sgs-------~dg~v~iwd~~~~ 171 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKYE---HDDIVKTLSVFSDG-TQ-AVSGG-------KDFSVKVWDLSQK 171 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEECC---CSSCEEEEEECSSS-SE-EEEEE-------TTSCEEEEETTTT
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccCC---CCCCEEEEEECCCC-CE-EEEEe-------CCCeEEEEECCCC
Confidence 3555555555678999999988765443321110 01233456666533 23 22222 2345778888776
Q ss_pred ceEEeccCCCeeeecCCcceee--Cce-EEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE--
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-- 261 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-- 261 (383)
.-...- .... ..-..+.+ +|. +...+..+. .|..+|+.+.+... +..... ... ...+...
T Consensus 172 ~~~~~~-~~h~---~~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~~~~~~~~~~~---~~~-v~~v~~sp~ 237 (357)
T 4g56_B 172 AVLKSY-NAHS---SEVNCVAACPGKDTIFLSCGEDG------RILLWDTRKPKPATRIDFCAS---DTI-PTSVTWHPE 237 (357)
T ss_dssp EEEEEE-CCCS---SCEEEEEECTTCSSCEEEEETTS------CEEECCTTSSSCBCBCCCTTC---CSC-EEEEEECTT
T ss_pred cEEEEE-cCCC---CCEEEEEEccCCCceeeeeccCC------ceEEEECCCCceeeeeeeccc---ccc-ccchhhhhc
Confidence 432111 0000 00012222 332 222232222 27888887654322 222111 111 1123332
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
++.+.+...... .+.||-++ +. ...++.. -.....-+++.++|+.++... ..++.+.+||+++++
T Consensus 238 ~~~~la~g~~d~--~i~~wd~~~~~--~~~~~~~-~~~~v~~l~~sp~~~~~lasg---------s~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 238 KDDTFACGDETG--NVSLVNIKNPD--SAQTSAV-HSQNITGLAYSYHSSPFLASI---------SEDCTVAVLDADFSE 303 (357)
T ss_dssp STTEEEEEESSS--CEEEEESSCGG--GCEEECC-CSSCEEEEEECSSSSCCEEEE---------ETTSCEEEECTTSCE
T ss_pred ccceEEEeeccc--ceeEEECCCCc--EeEEEec-cceeEEEEEEcCCCCCEEEEE---------eCCCEEEEEECCCCc
Confidence 355655555444 79999887 32 2233332 113345567777765444431 356789999999988
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
+.
T Consensus 304 ~~ 305 (357)
T 4g56_B 304 VF 305 (357)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.77 E-value=9.4 Score=33.11 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=56.7
Q ss_pred EEEEEECCC-ceeeE-----ecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCCCcEEEEEeC---CceeeeEEEcC-C
Q 016752 228 LIVAFNLES-EEFQE-----VPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLK---GCWTKAFSFHR-S 295 (383)
Q Consensus 228 ~il~fD~~~-e~~~~-----i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~-~ 295 (383)
.|..+|+.+ .+... +..+... . ...+... +|+ |++...... .+.+|.++ +.+.....+.. .
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~pdg~~l~~~~~~~~--~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGA---G--PRHMVFHPNEQYAYCVNELNS--SVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTC---C--EEEEEECTTSSEEEEEETTTT--EEEEEESSCTTSCCEEEEEEECSC
T ss_pred EEEEEEecCCCceeeecccccccCCCC---C--cceEEECCCCCEEEEEeCCCC--EEEEEEecCCCCcEEEEeeccccC
Confidence 488999887 65542 2333221 1 1123332 565 444443333 89999996 55654444442 1
Q ss_pred C--C--ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC--CCeEE
Q 016752 296 V--G--DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ--SQKAA 342 (383)
Q Consensus 296 ~--~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~--~~~~~ 342 (383)
. . ....-+.+.++|+.+++.. ..+..+..||++ +++.+
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~---------~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACD---------RTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEE---------TTTTEEEEEEECTTSCCEE
T ss_pred ccccccCCccceEECCCCCEEEEEe---------cCCCEEEEEEEcCCCCceE
Confidence 1 1 2233467778888888763 356789999998 55555
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=89.51 E-value=10 Score=33.31 Aligned_cols=192 Identities=10% Similarity=0.020 Sum_probs=99.0
Q ss_pred CeeEE-EecCCCcEEEEcCCccce-eecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 109 NGLIA-LKNDENGIAFWNPSTKEH-LILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 109 ~GLll-~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
++.+. .......+.|+|+.|++. ..+|... ...++.+++. . ++..... ....+.+++..+
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---------~p~~i~~~~~--g-~lyv~~~------~~~~v~~iD~~t 114 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---------SPRYIHFLSD--E-KAYVTQI------WDYRIFIINPKT 114 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---------SEEEEEEEET--T-EEEEEEB------SCSEEEEEETTT
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---------CCcEEEEeCC--C-eEEEEEC------CCCeEEEEECCC
Confidence 34443 333456799999999887 4564321 1123445432 3 4444331 235678889888
Q ss_pred CceE-EeccCCCe-eeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEE-EC
Q 016752 187 NSWR-RIRVDFPY-YILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGN-FS 262 (383)
Q Consensus 187 ~~Wr-~~~~~~p~-~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~-~~ 262 (383)
+.-. .++..... .......-+.-+|.+|...... ...|.++|+.+.+.. .++..... . .+.. -+
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~-----~~~v~viD~~t~~~~~~i~~g~~p--~-----~i~~~~d 182 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSY-----QNRILKIDTETDKVVDELTIGIQP--T-----SLVMDKY 182 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTT-----CCEEEEEETTTTEEEEEEECSSCB--C-----CCEECTT
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCC-----CCEEEEEECCCCeEEEEEEcCCCc--c-----ceEEcCC
Confidence 7532 22211100 0001111223566777664311 125999999987653 45443221 1 1222 36
Q ss_pred CeEEEEEecCCCC------cEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEe
Q 016752 263 GCLYFSCLCNYPQ------PVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYD 335 (383)
Q Consensus 263 G~L~~~~~~~~~~------~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~yd 335 (383)
|+++++....... .-.|++++ ..-....++....+....-+++.++++.+|+. .. .++.+|
T Consensus 183 G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~-----------~~-~v~~~d 250 (328)
T 3dsm_A 183 NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI-----------NN-DIWRMP 250 (328)
T ss_dssp SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE-----------SS-SEEEEE
T ss_pred CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE-----------cc-EEEEEE
Confidence 8887776532100 12444444 22222333432112335567777778888888 33 789999
Q ss_pred CCCCeEE
Q 016752 336 PQSQKAA 342 (383)
Q Consensus 336 l~~~~~~ 342 (383)
++++++.
T Consensus 251 ~~t~~~~ 257 (328)
T 3dsm_A 251 VEADRVP 257 (328)
T ss_dssp TTCSSCC
T ss_pred CCCCcee
Confidence 9988864
No 50
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=89.13 E-value=13 Score=33.76 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=64.8
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcC-CcCCeeeeEEEE-ECCeEEEEEecCCCCcEEEEEeC-Cce
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLE-DKKNVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLK-GCW 286 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~-~~~~~~~~~L~~-~~G~L~~~~~~~~~~~l~iW~l~-~~W 286 (383)
+|.++.....+. .|..+|+.+.+......+... ..... -..+.. -+|.+++...... .+.+|.++ ++-
T Consensus 133 ~~~~~~~~~~~~------~i~~~d~~~g~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~s~~~d~--~v~~~d~~~~~~ 203 (433)
T 3bws_A 133 NTRLAIPLLEDE------GMDVLDINSGQTVRLSPPEKYKKKLGF-VETISIPEHNELWVSQMQAN--AVHVFDLKTLAY 203 (433)
T ss_dssp SSEEEEEBTTSS------SEEEEETTTCCEEEECCCHHHHTTCCE-EEEEEEGGGTEEEEEEGGGT--EEEEEETTTCCE
T ss_pred CCeEEEEeCCCC------eEEEEECCCCeEeeecCcccccccCCc-eeEEEEcCCCEEEEEECCCC--EEEEEECCCceE
Confidence 556655443322 399999988766543222111 11111 112232 2677777766544 89999987 433
Q ss_pred eeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 287 TKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 287 ~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.. ++.. -.....-+++.++|+.+++.. ..++.+..||+++++..
T Consensus 204 ~~--~~~~-~~~~~~~~~~~~~~~~l~~~~---------~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 204 KA--TVDL-TGKWSKILLYDPIRDLVYCSN---------WISEDISVIDRKTKLEI 247 (433)
T ss_dssp EE--EEEC-SSSSEEEEEEETTTTEEEEEE---------TTTTEEEEEETTTTEEE
T ss_pred EE--EEcC-CCCCeeEEEEcCCCCEEEEEe---------cCCCcEEEEECCCCcEE
Confidence 32 3322 112345567778888887773 35678999999988766
No 51
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.05 E-value=13 Score=32.74 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=61.2
Q ss_pred EEEEEECCCceeeEec----CCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCce
Q 016752 228 LIVAFNLESEEFQEVP----LPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDY 299 (383)
Q Consensus 228 ~il~fD~~~e~~~~i~----~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~ 299 (383)
.|..||+.+.++..+. .|... .. ...+... +|+..++........+.||.++ +.+.....+.. +..
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~--~~--~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~ 307 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNA--QG--SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIH 307 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCC--CC--EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSC
T ss_pred eEEEEEecCCceEEeEEEecCCCCC--CC--cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCC
Confidence 4888888877765442 22211 11 1133333 6765444443312389999996 67766666654 333
Q ss_pred eEEEEEEeCCCEEEEEeccCCCccccCCCcEEEE--EeCCCCeEEEEE
Q 016752 300 VKALAYSKSEDKVLVDKFKYGEEDDDINRWELYW--YDPQSQKAADQV 345 (383)
Q Consensus 300 ~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~--ydl~~~~~~~~v 345 (383)
..-++++++|+.|++.. .....+.. +|+++++++ .+
T Consensus 308 ~~~~~~spdg~~l~~~~---------~~~~~v~v~~~d~~~g~~~-~~ 345 (361)
T 3scy_A 308 PRNFIITPNGKYLLVAC---------RDTNVIQIFERDQATGLLT-DI 345 (361)
T ss_dssp CCEEEECTTSCEEEEEE---------TTTTEEEEEEECTTTCCEE-EC
T ss_pred CceEEECCCCCEEEEEE---------CCCCCEEEEEEECCCCcEe-ec
Confidence 45677888998888873 23444444 788899988 55
No 52
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.90 E-value=14 Score=32.89 Aligned_cols=189 Identities=13% Similarity=0.097 Sum_probs=91.4
Q ss_pred eeCcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 105 IDSCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 105 ~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
....+|.|.+......++.+|+.|++.+.--....... .... .+ +. +|+... ....+..|+.
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~---~~p~----~~---~~-~v~v~~-------~~g~l~~~d~ 160 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL---SRPV----VS---DG-LVLIHT-------SNGQLQALNE 160 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC---SCCE----EE---TT-EEEEEC-------TTSEEEEEET
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE---cCCE----EE---CC-EEEEEc-------CCCeEEEEEC
Confidence 33457777777666679999999987652111111100 0011 11 12 233221 1346777887
Q ss_pred CCC--ceEEeccCCCee-eecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEe-cCCCcCCc-C---Cee
Q 016752 185 RSN--SWRRIRVDFPYY-ILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEV-PLPHLEDK-K---NVL 254 (383)
Q Consensus 185 ~~~--~Wr~~~~~~p~~-~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i-~~P~~~~~-~---~~~ 254 (383)
.++ .|+... ..+.. ......++..+|.+|.-... ..+.++|..+.+ |+.- ..|..... . ..
T Consensus 161 ~tG~~~W~~~~-~~~~~~~~~~~~~~~~~~~v~~g~~~-------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~- 231 (376)
T 3q7m_A 161 ADGAVKWTVNL-DMPSLSLRGESAPTTAFGAAVVGGDN-------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDV- 231 (376)
T ss_dssp TTCCEEEEEEC-CC-----CCCCCCEEETTEEEECCTT-------TEEEEEETTTCCEEEEEECCC-----------CC-
T ss_pred CCCcEEEEEeC-CCCceeecCCCCcEEECCEEEEEcCC-------CEEEEEECCCCcEEEEEecccCCCCccccccccc-
Confidence 776 487654 22211 11123566778887764322 249999997664 4432 22221100 0 00
Q ss_pred eeEEEEECCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEE
Q 016752 255 VMFVGNFSGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 255 ~~~L~~~~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
.......+|.+++... .. .+..+-.+ ..|... . +....+ . .+++.|++.. .++.+
T Consensus 232 ~~~p~~~~~~v~~~~~-~g--~l~~~d~~tG~~~w~~~----~--~~~~~~-~--~~~~~l~~~~----------~~g~l 289 (376)
T 3q7m_A 232 DTTPVVVNGVVFALAY-NG--NLTALDLRSGQIMWKRE----L--GSVNDF-I--VDGNRIYLVD----------QNDRV 289 (376)
T ss_dssp CCCCEEETTEEEEECT-TS--CEEEEETTTCCEEEEEC----C--CCEEEE-E--EETTEEEEEE----------TTCCE
T ss_pred CCCcEEECCEEEEEec-Cc--EEEEEECCCCcEEeecc----C--CCCCCc-e--EECCEEEEEc----------CCCeE
Confidence 0112334566655432 11 33333333 234422 1 111112 2 2357888883 56689
Q ss_pred EEEeCCCCeEE
Q 016752 332 YWYDPQSQKAA 342 (383)
Q Consensus 332 ~~ydl~~~~~~ 342 (383)
+.+|.++++..
T Consensus 290 ~~~d~~tG~~~ 300 (376)
T 3q7m_A 290 MALTIDGGVTL 300 (376)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcEE
Confidence 99999988865
No 53
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.61 E-value=15 Score=32.73 Aligned_cols=178 Identities=11% Similarity=0.027 Sum_probs=95.7
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCC
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDF 196 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~ 196 (383)
.+..+.|||..+++....-.... ....+.+++.. .+-++... ....+.+++..++.-...- ..
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~dg-~~l~~~~~-------~d~~i~v~d~~~~~~~~~~-~~ 72 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGS--------NPMGAVISPDG-TKVYVANA-------HSNDVSIIDTATNNVIATV-PA 72 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTS-SEEEEEEG-------GGTEEEEEETTTTEEEEEE-EC
T ss_pred CCCEEEEEECCCCeEEEEeecCC--------CcceEEECCCC-CEEEEECC-------CCCeEEEEECCCCeEEEEE-EC
Confidence 45678999999887664322211 12345666533 23222211 2457889998887543221 11
Q ss_pred CeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CCeEE-EEEec
Q 016752 197 PYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SGCLY-FSCLC 271 (383)
Q Consensus 197 p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~L~-~~~~~ 271 (383)
+. .-..+.+ +|..-+++.... ..|..+|+.+.+... +..+. . ...+... +|+.. +....
T Consensus 73 ~~----~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~~-----~--~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 73 GS----SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTGK-----S--PLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp SS----SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS-----S--EEEEEECTTSSEEEEEETT
T ss_pred CC----CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCCC-----C--cceEEECCCCCEEEEEeCC
Confidence 11 0012222 455333333221 249999998876543 33221 1 1123333 46544 44433
Q ss_pred CCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 272 NYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 272 ~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.. .+.+|-++ ++........ .....+.+.++|+.+++.. ..++.+..||+++++..
T Consensus 137 ~~--~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~---------~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 137 DK--TVSVINTVTKAVINTVSVG----RSPKGIAVTPDGTKVYVAN---------FDSMSISVIDTVTNSVI 193 (391)
T ss_dssp TT--EEEEEETTTTEEEEEEECC----SSEEEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEEE
T ss_pred CC--EEEEEECCCCcEEEEEecC----CCcceEEECCCCCEEEEEe---------CCCCEEEEEECCCCeEE
Confidence 33 89999887 5443332222 2245667778888887663 35678999999998876
No 54
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.56 E-value=25 Score=35.23 Aligned_cols=194 Identities=12% Similarity=0.065 Sum_probs=96.3
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
+|-|.+......++.+||.|+++..++..... ......+..|+.. + +.+.. ...+..|+..++.
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-----~~~v~~i~~d~~g---~-lwigt-------~~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKFQIIELEKNE-----LLDVRVFYEDKNK---K-IWIGT-------HAGVFVIDLASKK 480 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEEEECCSTTTC-----CCCEEEEEECTTS---E-EEEEE-------TTEEEEEESSSSS
T ss_pred CCCEEEEeccCCEEEEcCCCCcEEEeccCCCC-----CCeEEEEEECCCC---C-EEEEE-------CCceEEEeCCCCe
Confidence 33333333334577777777777666532110 1122234344321 1 22221 2457788888888
Q ss_pred eEEeccCCC-eeeecCC-cceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE-ECC
Q 016752 189 WRRIRVDFP-YYILHGW-DGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN-FSG 263 (383)
Q Consensus 189 Wr~~~~~~p-~~~~~~~-~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G 263 (383)
|+... ..+ ....... ..++. +|.+ |++.... .+..||..++++..+..+....... -..+.+ .+|
T Consensus 481 ~~~~~-~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~------Gl~~~~~~~~~~~~~~~~~~l~~~~--i~~i~~d~~g 550 (781)
T 3v9f_A 481 VIHHY-DTSNSQLLENFVRSIAQDSEGRF-WIGTFGG------GVGIYTPDMQLVRKFNQYEGFCSNT--INQIYRSSKG 550 (781)
T ss_dssp CCEEE-CTTTSSCSCSCEEEEEECTTCCE-EEEESSS------CEEEECTTCCEEEEECTTTTCSCSC--EEEEEECTTS
T ss_pred EEecc-cCcccccccceeEEEEEcCCCCE-EEEEcCC------CEEEEeCCCCeEEEccCCCCCCCCe--eEEEEECCCC
Confidence 87654 221 0000011 22333 4554 6665533 2999999999998876544332222 123444 357
Q ss_pred eEEEEEecCCCCcE-EEEEeC-CceeeeEEEcCCCC-ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 264 CLYFSCLCNYPQPV-DIWVLK-GCWTKAFSFHRSVG-DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 264 ~L~~~~~~~~~~~l-~iW~l~-~~W~~~~~i~~~~~-~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
.|.+... . .+ ..+..+ +.+.. +.....++ ..+.-+....+ +.|.+. ....+..||+++++
T Consensus 551 ~lWi~T~--~--Glv~~~d~~~~~~~~-~~~~~gl~~~~i~~i~~d~~-g~lW~~-----------t~~Gl~~~~~~~~~ 613 (781)
T 3v9f_A 551 QMWLATG--E--GLVCFPSARNFDYQV-FQRKEGLPNTHIRAISEDKN-GNIWAS-----------TNTGISCYITSKKC 613 (781)
T ss_dssp CEEEEET--T--EEEEESCTTTCCCEE-ECGGGTCSCCCCCEEEECSS-SCEEEE-----------CSSCEEEEETTTTE
T ss_pred CEEEEEC--C--CceEEECCCCCcEEE-ccccCCCCCceEEEEEECCC-CCEEEE-----------cCCceEEEECCCCc
Confidence 7776653 2 22 333222 33321 11111122 22333333334 457888 45579999999999
Q ss_pred EEEEEE
Q 016752 341 AADQVT 346 (383)
Q Consensus 341 ~~~~v~ 346 (383)
++ ...
T Consensus 614 ~~-~~~ 618 (781)
T 3v9f_A 614 FY-TYD 618 (781)
T ss_dssp EE-EEC
T ss_pred eE-Eec
Confidence 88 653
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.48 E-value=14 Score=32.23 Aligned_cols=206 Identities=8% Similarity=-0.018 Sum_probs=103.5
Q ss_pred eeCcCeeEEEec-CCCcEEEEcCCcccee-ecCCCCCCCcC-ccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEE
Q 016752 105 IDSCNGLIALKN-DENGIAFWNPSTKEHL-ILPKFWGDLKD-KVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSV 181 (383)
Q Consensus 105 ~~s~~GLll~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~-~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~v 181 (383)
+...++.+.+.. ....+.++|+.|++.. .++........ .......++.+++..+ +-++.-. .....+.+
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~------~~~~~i~~ 168 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGI------GKESVIWV 168 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEE------SSSCEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEec------CCCceEEE
Confidence 334444444443 4568999999998864 34332211000 0011234577777544 3222221 02356788
Q ss_pred EEcCCCceEEeccCCCeeeecCCccee--eCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEE
Q 016752 182 YSLRSNSWRRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFV 258 (383)
Q Consensus 182 yss~~~~Wr~~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L 258 (383)
|+..++.=... .+... ....++. -+|...++.... ..|..+|+.+.+.. .++.+....... ...+
T Consensus 169 ~d~~~~~~~~~---~~~~~-~~~~~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~ 236 (353)
T 3vgz_A 169 VDGGNIKLKTA---IQNTG-KMSTGLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGKEHF--FINI 236 (353)
T ss_dssp EETTTTEEEEE---ECCCC-TTCCCCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSSCCC--EEEE
T ss_pred EcCCCCceEEE---ecCCC-CccceEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCCCcc--cceE
Confidence 88877632211 11000 0012222 256544444332 24889999887654 344432211111 1123
Q ss_pred EEE-CCe-EEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEe
Q 016752 259 GNF-SGC-LYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYD 335 (383)
Q Consensus 259 ~~~-~G~-L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~yd 335 (383)
... +|+ |++...... .+.+|-++ ++-.. .+.. +. ..-+.++++|+.+++.. ..+..+..||
T Consensus 237 ~~s~dg~~l~~~~~~~~--~v~~~d~~~~~~~~--~~~~--~~-~~~~~~s~dg~~l~v~~---------~~~~~v~~~d 300 (353)
T 3vgz_A 237 SLDTARQRAFITDSKAA--EVLVVDTRNGNILA--KVAA--PE-SLAVLFNPARNEAYVTH---------RQAGKVSVID 300 (353)
T ss_dssp EEETTTTEEEEEESSSS--EEEEEETTTCCEEE--EEEC--SS-CCCEEEETTTTEEEEEE---------TTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCC--EEEEEECCCCcEEE--EEEc--CC-CceEEECCCCCEEEEEE---------CCCCeEEEEE
Confidence 333 454 554443223 67777766 44333 3332 11 12367778888888873 3567899999
Q ss_pred CCCCeEEEEE
Q 016752 336 PQSQKAADQV 345 (383)
Q Consensus 336 l~~~~~~~~v 345 (383)
+++++....+
T Consensus 301 ~~~~~~~~~~ 310 (353)
T 3vgz_A 301 AKSYKVVKTF 310 (353)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 9998877333
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.19 E-value=15 Score=32.28 Aligned_cols=192 Identities=13% Similarity=0.186 Sum_probs=94.6
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..++++..+-..... ......+.+.+. +++-+. .. ....+.+|+..++.+.
T Consensus 22 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~-~~~l~~-~~-------~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 22 QIAICPNNHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAPD-SNRIVT-CG-------TDRNAYVWTLKGRTWK 87 (372)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEETT-TTEEEE-EE-------TTSCEEEEEEETTEEE
T ss_pred EEEEEeCCCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeCC-CCEEEE-Ec-------CCCeEEEEECCCCeee
Confidence 344443456788999988853222221111 123445667763 333322 22 2345788888888765
Q ss_pred EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCce-e---eEecCCCcCCcCCeeeeEEEEE-CC
Q 016752 191 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEE-F---QEVPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~-~---~~i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
......... ..-..+.+ +|.....+..+. .|..+|+.+.. + ..+..+.. .. -..+... +|
T Consensus 88 ~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~---~~--i~~~~~~~~~ 154 (372)
T 1k8k_C 88 PTLVILRIN--RAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIR---ST--VLSLDWHPNS 154 (372)
T ss_dssp EEEECCCCS--SCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCC---SC--EEEEEECTTS
T ss_pred eeEEeecCC--CceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccC---CC--eeEEEEcCCC
Confidence 443111100 00012222 454444443332 26677766543 2 22222211 11 1123333 56
Q ss_pred eEEEEEecCCCCcEEEEEeC----------Ccee-------eeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccC
Q 016752 264 CLYFSCLCNYPQPVDIWVLK----------GCWT-------KAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDI 326 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~----------~~W~-------~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~ 326 (383)
.+.+...... .+.+|-+. ..|. ....+.. -.....-+.+.++|+.|+.. .
T Consensus 155 ~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~----------~ 221 (372)
T 1k8k_C 155 VLLAAGSCDF--KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWV----------S 221 (372)
T ss_dssp SEEEEEETTS--CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEE----------E
T ss_pred CEEEEEcCCC--CEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEE----------e
Confidence 6666655444 79999864 1222 1222221 11335556677787777666 3
Q ss_pred CCcEEEEEeCCCCeEE
Q 016752 327 NRWELYWYDPQSQKAA 342 (383)
Q Consensus 327 ~~~~~~~ydl~~~~~~ 342 (383)
.++.+..||+++++..
T Consensus 222 ~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 222 HDSTVCLADADKKMAV 237 (372)
T ss_dssp TTTEEEEEEGGGTTEE
T ss_pred CCCEEEEEECCCCcee
Confidence 6778999999877655
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=86.78 E-value=13 Score=31.37 Aligned_cols=189 Identities=10% Similarity=0.021 Sum_probs=94.2
Q ss_pred CcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
..+|.|.+.. ....++++|| +++...+..+.. .....++.+|+.. ++..... ....+.+|+.
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~------~~~~~~i~~~~~g---~l~v~~~------~~~~i~~~~~- 169 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK------GSYPSFITLGSDN---ALWFTEN------QNNAIGRITE- 169 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST------TCCEEEEEECTTS---CEEEEET------TTTEEEEECT-
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC------CCCCceEEEcCCC---CEEEEeC------CCCEEEEEcC-
Confidence 3466665554 4567899999 777665433211 1123356667543 2222220 2345677777
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-C
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-S 262 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~ 262 (383)
++...... .+... ....++.+ +|.+|+..... ..|..||+ +.++..+.+|.... . ...+... +
T Consensus 170 ~g~~~~~~--~~~~~-~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~--~--~~~i~~~~~ 235 (299)
T 2z2n_A 170 SGDITEFK--IPTPA-SGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPNA--R--PHAITAGAG 235 (299)
T ss_dssp TCCEEEEE--CSSTT-CCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC--C--EEEEEECST
T ss_pred CCcEEEee--CCCCC-CcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCCC--C--ceeEEECCC
Confidence 66665442 11100 00123333 57876554322 24999999 77777766653221 1 1234443 5
Q ss_pred CeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
|.|++...... .+..|..++.. ....++... ....-+.+ .+ +.+++.. ....+..||+++++++
T Consensus 236 g~l~v~~~~~~--~i~~~d~~g~~-~~~~~~~~~-~~~~~i~~-~~-g~l~v~~----------~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 236 IDLWFTEWGAN--KIGRLTSNNII-EEYPIQIKS-AEPHGICF-DG-ETIWFAM----------ECDKIGKLTLIKDNME 299 (299)
T ss_dssp TCEEEEETTTT--EEEEEETTTEE-EEEECSSSS-CCEEEEEE-CS-SCEEEEE----------TTTEEEEEEEC-----
T ss_pred CCEEEeccCCc--eEEEECCCCce-EEEeCCCCC-CccceEEe-cC-CCEEEEe----------cCCcEEEEEcCcccCC
Confidence 78777664333 55555544321 112222111 22344455 55 4577772 4678999999988764
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=86.14 E-value=16 Score=31.48 Aligned_cols=194 Identities=10% Similarity=0.039 Sum_probs=98.0
Q ss_pred CcCeeEEEecCCCcEEEEcCCccceeec-CCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKNDENGIAFWNPSTKEHLIL-PKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
+.+|-+++...+..+.|||..+++.... ...... ........+.+.+.. .+-+ ... ....+.+|+..
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~-~~l~-~~~-------~d~~i~~~d~~ 127 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL---NRDNYIRSCKLLPDG-CTLI-VGG-------EASTLSIWDLA 127 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECS---CTTSBEEEEEECTTS-SEEE-EEE-------SSSEEEEEECC
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeeccccc---CCCCcEEEEEEcCCC-CEEE-EEc-------CCCcEEEEECC
Confidence 3355444333366789999877653211 110000 002234456666633 3322 222 24578899998
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~- 261 (383)
++...... ..... ...-..+.+ +|.....+.... .|..+|+.+.+... +..... . -..+...
T Consensus 128 ~~~~~~~~-~~~~~-~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~~~~~~~~~~~----~--i~~~~~~~ 193 (337)
T 1gxr_A 128 APTPRIKA-ELTSS-APACYALAISPDSKVCFSCCSDG------NIAVWDLHNQTLVRQFQGHTD----G--ASCIDISN 193 (337)
T ss_dssp CC--EEEE-EEECS-SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSS----C--EEEEEECT
T ss_pred CCCcceee-ecccC-CCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCceeeeeecccC----c--eEEEEECC
Confidence 87654332 11000 000011222 455444444332 38899998765432 332211 1 1123333
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|...++..... .+.+|-++ +.- ...+.. .....-+.+.++|+.++.. ..++.+..||+++++
T Consensus 194 ~~~~l~~~~~dg--~i~~~d~~~~~~--~~~~~~--~~~v~~~~~s~~~~~l~~~----------~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 194 DGTKLWTGGLDN--TVRSWDLREGRQ--LQQHDF--TSQIFSLGYCPTGEWLAVG----------MESSNVEVLHVNKPD 257 (337)
T ss_dssp TSSEEEEEETTS--EEEEEETTTTEE--EEEEEC--SSCEEEEEECTTSSEEEEE----------ETTSCEEEEETTSSC
T ss_pred CCCEEEEEecCC--cEEEEECCCCce--EeeecC--CCceEEEEECCCCCEEEEE----------cCCCcEEEEECCCCC
Confidence 566666655444 89999887 432 222332 2234556677788877777 366789999999887
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 258 ~~ 259 (337)
T 1gxr_A 258 KY 259 (337)
T ss_dssp EE
T ss_pred eE
Confidence 66
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=86.08 E-value=18 Score=32.44 Aligned_cols=198 Identities=10% Similarity=0.032 Sum_probs=95.0
Q ss_pred eeEEEecCCCcEEEEcCCccc------eeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 110 GLIALKNDENGIAFWNPSTKE------HLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 110 GLll~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
.+|+....+..+.|||..+++ ........... ......+.+.+..+.+ ++... ....+.+|+
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~-l~~~~-------~dg~v~iwd 194 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS----VDEVISLAWNQSLAHV-FASAG-------SSNFASIWD 194 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS----SCCCCEEEECSSCTTE-EEEES-------SSSCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccccCC----CCCeeEEEeCCCCCcE-EEEEc-------CCCCEEEEE
Confidence 355555456679999998876 22211110110 2233456666643333 22221 234578888
Q ss_pred cCCCceEEeccCCCeee---ecCCcceee--Cc-eEEEEEecCCCCCCccEEEEEECCCceeeEecCC-CcCCcCCeeee
Q 016752 184 LRSNSWRRIRVDFPYYI---LHGWDGTFA--DG-HVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLP-HLEDKKNVLVM 256 (383)
Q Consensus 184 s~~~~Wr~~~~~~p~~~---~~~~~~v~~--~G-~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P-~~~~~~~~~~~ 256 (383)
..++.-...- ..+... ...-..+.+ +| .+...+..+. ....|..+|+.+..-....+. .+. .. -.
T Consensus 195 ~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~~~i~~~d~~~~~~~~~~~~~~~~--~~--v~ 266 (416)
T 2pm9_A 195 LKAKKEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD---NDPSILIWDLRNANTPLQTLNQGHQ--KG--IL 266 (416)
T ss_dssp TTTTEEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS---SSCCCCEEETTSTTSCSBCCCSCCS--SC--EE
T ss_pred CCCCCcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCC---CCceEEEEeCCCCCCCcEEeecCcc--Cc--ee
Confidence 8876533221 111000 000022222 33 3333333321 011388888877431111111 111 11 12
Q ss_pred EEEEE--CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCC-CEEEEEeccCCCccccCCCcEEE
Q 016752 257 FVGNF--SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSE-DKVLVDKFKYGEEDDDINRWELY 332 (383)
Q Consensus 257 ~L~~~--~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g-~~v~l~~~~~~~~~~~~~~~~~~ 332 (383)
.+... +|.+.+...... .+.+|-++ ++ .+..+.. -.....-+.+.+++ ..++.. ..++.+.
T Consensus 267 ~~~~s~~~~~~l~s~~~dg--~v~~wd~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~~l~s~----------~~d~~i~ 331 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRDN--TVLLWNPESAE--QLSQFPA-RGNWCFKTKFAPEAPDLFACA----------SFDNKIE 331 (416)
T ss_dssp EEEECSSCSSCEEEEESSS--EEEEECSSSCC--EEEEEEC-SSSCCCCEEECTTCTTEEEEC----------CSSSEEE
T ss_pred EEEeCCCCCCeEEEEeCCC--CEEEeeCCCCc--cceeecC-CCCceEEEEECCCCCCEEEEE----------ecCCcEE
Confidence 33332 566666666544 89999887 42 3333332 11223446677777 554444 4677899
Q ss_pred EEeCCCCeEE
Q 016752 333 WYDPQSQKAA 342 (383)
Q Consensus 333 ~ydl~~~~~~ 342 (383)
.||+.+.+..
T Consensus 332 iw~~~~~~~~ 341 (416)
T 2pm9_A 332 VQTLQNLTNT 341 (416)
T ss_dssp EEESCCCCCS
T ss_pred EEEccCCCCC
Confidence 9999887643
No 60
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=85.08 E-value=22 Score=32.23 Aligned_cols=213 Identities=12% Similarity=-0.001 Sum_probs=107.0
Q ss_pred eCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 106 DSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 106 ~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+..+|.|...+ ....++.+++.++....+...... .-.++++|+..+ +++.... ....+++++.
T Consensus 124 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-------~p~glavd~~~g--~lY~~d~------~~~~I~~~~~ 188 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-------SPGGLAVDWVHD--KLYWTDS------GTSRIEVANL 188 (386)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-------CCCCEEEETTTT--EEEEEET------TTTEEEECBT
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-------CccEEEEEeCCC--eEEEEcC------CCCeEEEEeC
Confidence 34566665554 345677777776654443222111 123466776544 3333321 2345666666
Q ss_pred CCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE-
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN- 260 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~- 260 (383)
....-+.+. ... + ....++.+ +|.|||..... ...|..+|+....-..+-. .... . ..-|+.
T Consensus 189 dg~~~~~l~-~~~--l-~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~-~~~~-~---PnGlavd 254 (386)
T 3v65_B 189 DGAHRKVLL-WQS--L-EKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIAD-THLF-W---PNGLTID 254 (386)
T ss_dssp TSCSCEEEE-CSS--C-SCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEEC-SSCS-C---EEEEEEE
T ss_pred CCCceEEee-cCC--C-CCCcEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEE-CCCC-C---eeeEEEe
Confidence 543322221 100 0 01134444 58999986543 1359999997654443321 1111 1 113455
Q ss_pred -ECCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC
Q 016752 261 -FSGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ 337 (383)
Q Consensus 261 -~~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~ 337 (383)
.+|+|+++..... .|+..+ ++-.+. .+.. ....|.++.-+++.||+.. .....+..+|..
T Consensus 255 ~~~~~lY~aD~~~~----~I~~~d~dG~~~~~-~~~~---~~~~P~giav~~~~ly~td---------~~~~~V~~~~~~ 317 (386)
T 3v65_B 255 YAGRRMYWVDAKHH----VIERANLDGSHRKA-VISQ---GLPHPFAITVFEDSLYWTD---------WHTKSINSANKF 317 (386)
T ss_dssp GGGTEEEEEETTTT----EEEEECTTSCSCEE-EECS---SCSSEEEEEEETTEEEEEE---------TTTTEEEEEETT
T ss_pred CCCCEEEEEECCCC----EEEEEeCCCCeeEE-EEEC---CCCCceEEEEECCEEEEee---------CCCCeEEEEECC
Confidence 3788888875433 455555 421111 1211 1234666655567888884 467789999955
Q ss_pred CCeEEEEEEEeccCCCeeeEEEEEccccc
Q 016752 338 SQKAADQVTIHGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 338 ~~~~~~~v~~~~~~~~~~~~~~y~~sl~~ 366 (383)
+++..+.+. .+...- ..+.+|.++..+
T Consensus 318 ~G~~~~~i~-~~~~~p-~gi~v~~~~~q~ 344 (386)
T 3v65_B 318 TGKNQEIIR-NKLHFP-MDIHTLHPQRQP 344 (386)
T ss_dssp TCCSCEEEE-CSCSCC-CCEEEESGGGSC
T ss_pred CCcceEEEc-cCCCCC-ceEEEEchhcCc
Confidence 544431443 333332 466677665543
No 61
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.73 E-value=20 Score=31.53 Aligned_cols=188 Identities=12% Similarity=0.157 Sum_probs=90.0
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|.....+..+.|||..++++.......... ......+.+.|.. .+- +... ....+.+++..++.++
T Consensus 30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h----~~~v~~~~~sp~g-~~l-~s~s-------~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGH----QRTVRKVAWSPCG-NYL-ASAS-------FDATTCIWKKNQDDFE 96 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECSSC----SSCEEEEEECTTS-SEE-EEEE-------TTSCEEEEEECCC-EE
T ss_pred EEEEEcCCCeEEEEEcCCCcceeeeeecccc----CCcEEEEEECCCC-CEE-EEEE-------CCCcEEEEEccCCCeE
Confidence 3433445567889998877653221111111 2234456676633 332 2222 1345677877776655
Q ss_pred EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCce-eeEec-CCCcCCcCCeeeeEEEEE-CCeE
Q 016752 191 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVP-LPHLEDKKNVLVMFVGNF-SGCL 265 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~-~P~~~~~~~~~~~~L~~~-~G~L 265 (383)
.+. .+... ...-..+.+ +|.+-..+..+. .|..+|+.++. ...+. +..+. ... ..+... +|.+
T Consensus 97 ~~~-~~~~h-~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~--~~v--~~~~~~p~~~~ 164 (345)
T 3fm0_A 97 CVT-TLEGH-ENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHT--QDV--KHVVWHPSQEL 164 (345)
T ss_dssp EEE-EECCC-SSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCC--SCE--EEEEECSSSSC
T ss_pred EEE-EccCC-CCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcC--CCe--EEEEECCCCCE
Confidence 433 11100 000012222 454444333332 27788876542 22221 11111 111 122222 4665
Q ss_pred EEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeC
Q 016752 266 YFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDP 336 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl 336 (383)
.+...... .+.+|.++ +.|....++..- .....-+.+.++|..|+-. ..++.+..||.
T Consensus 165 l~s~s~d~--~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~----------s~D~~v~iW~~ 223 (345)
T 3fm0_A 165 LASASYDD--TVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQRLASC----------SDDRTVRIWRQ 223 (345)
T ss_dssp EEEEETTS--CEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSEEEEE----------ETTSCEEEEEE
T ss_pred EEEEeCCC--cEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCEEEEE----------eCCCeEEEecc
Confidence 55555444 79999998 788776666531 1234456666776655555 25556666664
No 62
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.68 E-value=23 Score=32.25 Aligned_cols=185 Identities=10% Similarity=-0.010 Sum_probs=98.2
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..++++|..|++...+...+. ....+.+.|.. ++-++... .+....+.+++..++..+.+. ..+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--------~~~~~~~spdg-~~la~~~~-----~~g~~~i~~~d~~~~~~~~l~-~~~~ 267 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--------HNGAPAFSPDG-SKLAFALS-----KTGSLNLYVMDLASGQIRQVT-DGRS 267 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--------CEEEEEECTTS-SEEEEEEC-----TTSSCEEEEEETTTCCEEECC-CCSS
T ss_pred cEEEEEECCCCcEEEeecCCC--------cccCEEEcCCC-CEEEEEEe-----cCCCceEEEEECCCCCEEeCc-CCCC
Confidence 479999999998876654321 23346666643 33222221 123456888898888766554 2211
Q ss_pred eeecCCcceee--Cce-EEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCC
Q 016752 199 YILHGWDGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNY 273 (383)
Q Consensus 199 ~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~ 273 (383)
.. ..+.+ +|. +++..... ....|..+|+.+.....+.... .. ...+... +|+ |++......
T Consensus 268 ~~----~~~~~spdg~~l~~~s~~~----g~~~i~~~d~~~~~~~~l~~~~-----~~-~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 268 NN----TEPTWFPDSQNLAFTSDQA----GRPQVYKVNINGGAPQRITWEG-----SQ-NQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp CE----EEEEECTTSSEEEEEECTT----SSCEEEEEETTSSCCEECCCSS-----SE-EEEEEECTTSSEEEEEEECSS
T ss_pred cc----cceEECCCCCEEEEEECCC----CCcEEEEEECCCCCEEEEecCC-----Cc-ccCeEECCCCCEEEEEECcCC
Confidence 00 11222 565 44444322 1235888999887655443221 11 1123332 565 444444333
Q ss_pred CCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 274 PQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 274 ~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
...+.+|-++ +... .+... .....+.++++|..|++.... .....++.+|+.++..+ .+
T Consensus 334 ~~~i~~~d~~~~~~~---~l~~~--~~~~~~~~spdg~~l~~~s~~-------~~~~~l~~~d~~g~~~~-~l 393 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQ---VLSST--FLDETPSLAPNGTMVIYSSSQ-------GMGSVLNLVSTDGRFKA-RL 393 (415)
T ss_dssp CEEEEEEETTTCCEE---ECCCS--SSCEEEEECTTSSEEEEEEEE-------TTEEEEEEEETTSCCEE-EC
T ss_pred ceEEEEEECCCCCEE---EecCC--CCcCCeEEcCCCCEEEEEEcC-------CCccEEEEEECCCCcEE-Ee
Confidence 2256666665 4432 22211 134456777888877776310 11237999999998887 65
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.35 E-value=23 Score=31.82 Aligned_cols=202 Identities=8% Similarity=0.005 Sum_probs=101.5
Q ss_pred eeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCce
Q 016752 110 GLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSW 189 (383)
Q Consensus 110 GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~W 189 (383)
.+|+....+..+.|||..+++...-...+.............+.+.|....+ ++... ....+.+|+..++..
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-l~s~~-------~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-LLSAG-------CDNVILVWDVGTGAA 166 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-EEEEE-------TTSCEEEEETTTTEE
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-EEEEc-------CCCEEEEEECCCCCc
Confidence 3555555567899999888743210000000000002234456666654332 22222 234578899888754
Q ss_pred EEec--cCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-e-cCCCcCCcCCeeeeEEEE-EC
Q 016752 190 RRIR--VDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-V-PLPHLEDKKNVLVMFVGN-FS 262 (383)
Q Consensus 190 r~~~--~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~~~~~~L~~-~~ 262 (383)
...- ....... ..+.+ +|.....+..+. .|..+|+.+.+... + ...... .. ..+.. -+
T Consensus 167 ~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~--~~---~~~~~~~~ 231 (402)
T 2aq5_A 167 VLTLGPDVHPDTI----YSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEGT--RP---VHAVFVSE 231 (402)
T ss_dssp EEEECTTTCCSCE----EEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCSS--SC---CEEEECST
T ss_pred cEEEecCCCCCce----EEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCCC--cc---eEEEEcCC
Confidence 3221 0111000 12222 555444444332 48999998766433 3 222211 11 12233 25
Q ss_pred CeEEEEEec-CCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 263 GCLYFSCLC-NYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 263 G~L~~~~~~-~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
|.+.++... .....+.+|-++ ..=.....++. .....-+.+.++|+.+++.. ..++.+.+||+.++
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~g---------~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT--SSGVLLPFFDPDTNIVYLCG---------KGDSSIRYFEITSE 300 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC--CSSCEEEEEETTTTEEEEEE---------TTCSCEEEEEECSS
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccC--CCceeEEEEcCCCCEEEEEE---------cCCCeEEEEEecCC
Confidence 776666531 122389999988 22122233332 12344567778888887762 34778999999998
Q ss_pred e--EEEEEE
Q 016752 340 K--AADQVT 346 (383)
Q Consensus 340 ~--~~~~v~ 346 (383)
+ +. .+.
T Consensus 301 ~~~~~-~l~ 308 (402)
T 2aq5_A 301 APFLH-YLS 308 (402)
T ss_dssp TTCEE-EEE
T ss_pred CcceE-eec
Confidence 8 55 543
No 64
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=84.32 E-value=20 Score=31.19 Aligned_cols=68 Identities=6% Similarity=0.029 Sum_probs=44.6
Q ss_pred CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+|.+.++..... .+.+|-++........+.. -.....-+.+.+++..++.. ..++.+..||+++.+.
T Consensus 186 ~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~----------~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 186 KGKYIIAGHKDG--KISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITS----------SRDTNSFLVDVSTLQV 252 (369)
T ss_dssp GGCEEEEEETTS--EEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEE----------ETTSEEEEEETTTCCE
T ss_pred CCCEEEEEcCCC--EEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEe----------cCCceEEEEECCCCce
Confidence 456555555444 8999998843444444443 11335556777788877766 3677899999998877
Q ss_pred E
Q 016752 342 A 342 (383)
Q Consensus 342 ~ 342 (383)
.
T Consensus 253 ~ 253 (369)
T 3zwl_B 253 L 253 (369)
T ss_dssp E
T ss_pred e
Confidence 6
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.30 E-value=20 Score=31.26 Aligned_cols=168 Identities=17% Similarity=0.168 Sum_probs=87.5
Q ss_pred EEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC-CCceEEecc-CCCeeeecCCccee--eCce-EEEEEecCCCC
Q 016752 149 VDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR-SNSWRRIRV-DFPYYILHGWDGTF--ADGH-VHWLVTNNPKD 223 (383)
Q Consensus 149 ~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~-~~~Wr~~~~-~~p~~~~~~~~~v~--~~G~-lywl~~~~~~~ 223 (383)
...+.++|..+ ++.... ....+.+|+.. ++....... ..+.. .....+. -+|. +|.......
T Consensus 143 ~~~~~~spdg~---l~v~~~------~~~~v~~~~~~~~g~~~~~~~~~~~~g--~~p~~~~~spdg~~l~v~~~~~~-- 209 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVIDL------GSDKVYVYNVSDAGQLSEQSVLTMEAG--FGPRHLVFSPDGQYAFLAGELSS-- 209 (347)
T ss_dssp EEEEEECTTSC---EEEEET------TTTEEEEEEECTTSCEEEEEEEECCTT--CCEEEEEECTTSSEEEEEETTTT--
T ss_pred ceEEEECCCCc---EEEEeC------CCCEEEEEEECCCCcEEEeeeEEcCCC--CCCceEEECCCCCEEEEEeCCCC--
Confidence 34567777544 333221 23467888888 565544320 01100 0001122 2676 555433322
Q ss_pred CCccEEEEEECC--CceeeEe----cCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCCCcEEEEEeC--CceeeeEEEc
Q 016752 224 DIENLIVAFNLE--SEEFQEV----PLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLK--GCWTKAFSFH 293 (383)
Q Consensus 224 ~~~~~il~fD~~--~e~~~~i----~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~ 293 (383)
.|..+|+. +.++..+ ..|........ ...+... +|+ |++...... .+.+|.++ +.+.....++
T Consensus 210 ----~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~i~~spdG~~l~v~~~~~~--~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 210 ----QIASLKYDTQTGAFTQLGIVKTIPADYTAHNG-AAAIRLSHDGHFLYVSNRGYN--TLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp ----EEEEEEEETTTTEEEEEEEEESSCTTCCSCCE-EEEEEECTTSCEEEEEEETTT--EEEEEEECGGGCEEEEEEEE
T ss_pred ----EEEEEEecCCCCceEEeeeeeecCCCCCCCCc-ceeEEECCCCCEEEEEeCCCC--EEEEEEECCCCcEEEeEEEe
Confidence 35555544 5665433 23332211111 1223333 576 555444333 89999997 5666666665
Q ss_pred CCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEE--eCCCCeEEEEEEE
Q 016752 294 RSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWY--DPQSQKAADQVTI 347 (383)
Q Consensus 294 ~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~y--dl~~~~~~~~v~~ 347 (383)
.. +....-++++++|+.|++.. .....+..| |.++++++ .+.-
T Consensus 283 ~~-~~~~~~~~~spdg~~l~v~~---------~~~~~v~v~~~d~~tg~l~-~~~~ 327 (347)
T 3hfq_A 283 TE-GDFPRDFDLDPTEAFVVVVN---------QNTDNATLYARDLTSGKLS-LLQK 327 (347)
T ss_dssp CS-SSCCCEEEECTTSSEEEEEE---------TTTTEEEEEEECTTTCCEE-EEEE
T ss_pred cC-CCCcCeEEECCCCCEEEEEE---------cCCCcEEEEEEeCCCCeEE-eccc
Confidence 41 22345677888988888873 234566666 88899998 7653
No 66
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=83.09 E-value=25 Score=31.24 Aligned_cols=191 Identities=10% Similarity=0.000 Sum_probs=101.7
Q ss_pred CeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+..|++.. ....+.|+|+.+++....-.... ....+.+++.. ++-++... ....+.+|+..++
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~dg-~~l~~~~~-------~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK--------SPLGLALSPDG-KKLYVTNN-------GDKTVSVINTVTK 148 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTS-SEEEEEET-------TTTEEEEEETTTT
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCCC--------CcceEEECCCC-CEEEEEeC-------CCCEEEEEECCCC
Confidence 33444443 44689999999988764433211 22346666543 33322221 2457888998887
Q ss_pred ceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CC
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
.....- ..... ...+.+ +|..-++..... ..|..+|+.+.+... +.... . ...+... +|
T Consensus 149 ~~~~~~-~~~~~----~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~------~-~~~~~~~~~g 211 (391)
T 1l0q_A 149 AVINTV-SVGRS----PKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKVEA------A-PSGIAVNPEG 211 (391)
T ss_dssp EEEEEE-ECCSS----EEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS------E-EEEEEECTTS
T ss_pred cEEEEE-ecCCC----cceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEecCC------C-ccceEECCCC
Confidence 543322 11100 012222 454433443322 248999998876543 22211 1 1123332 45
Q ss_pred eEEEEEec-CCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 264 CLYFSCLC-NYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 264 ~L~~~~~~-~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+..++... .....+.+|-++ +. ....+.. +....-+.+.++|+.|++.. ..++.+..||++++++
T Consensus 212 ~~l~~~~~~~~~~~v~~~d~~~~~--~~~~~~~--~~~~~~~~~s~dg~~l~~s~---------~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 212 TKAYVTNVDKYFNTVSMIDTGTNK--ITARIPV--GPDPAGIAVTPDGKKVYVAL---------SFXNTVSVIDTATNTI 278 (391)
T ss_dssp SEEEEEEECSSCCEEEEEETTTTE--EEEEEEC--CSSEEEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEE
T ss_pred CEEEEEecCcCCCcEEEEECCCCe--EEEEEec--CCCccEEEEccCCCEEEEEc---------CCCCEEEEEECCCCcE
Confidence 54444432 122378888887 42 3334443 12234566778888887763 3567899999999988
Q ss_pred EEEE
Q 016752 342 ADQV 345 (383)
Q Consensus 342 ~~~v 345 (383)
...+
T Consensus 279 ~~~~ 282 (391)
T 1l0q_A 279 TATM 282 (391)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7343
No 67
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=82.62 E-value=27 Score=31.44 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=40.9
Q ss_pred EEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCC-EEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 277 VDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSED-KVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 277 l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
=.||+.+ .....+.+|+. +....-+.+++||+ .+|... ..+..+..||+++.+..
T Consensus 298 ~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~---------~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALS---------AGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEc---------CCCCeEEEEECCCCCEE
Confidence 3799999 77888888864 33455677788888 566551 24678999999999887
No 68
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.38 E-value=20 Score=29.83 Aligned_cols=210 Identities=11% Similarity=-0.017 Sum_probs=99.3
Q ss_pred CcCeeEEEecCCCcEEEEcCCc-cceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKNDENGIAFWNPST-KEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
+-+|-.++......++++|..+ ++...+...... .....+.+.|.. ++- +.... .......+.+++..
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~spdg-~~l-~~~~~---~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT------ICNNDHGISPDG-ALY-AISDK---VEFGKSAIYLLPST 118 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC------CBCSCCEECTTS-SEE-EEEEC---TTTSSCEEEEEETT
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc------ccccceEECCCC-CEE-EEEEe---CCCCcceEEEEECC
Confidence 3455433333356799999999 877766543211 111224445432 222 22221 11134566667766
Q ss_pred CCceEEeccCCCeeeecCCcceeeCce-EEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CC
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFADGH-VHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
++.-+.+....+... ....-+|. +++...... ...|..+|+.+.....+..... . ...+... +|
T Consensus 119 ~~~~~~~~~~~~~~~----~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~----~--~~~~~~s~dg 184 (297)
T 2ojh_A 119 GGTPRLMTKNLPSYW----HGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEG----R--NDGPDYSPDG 184 (297)
T ss_dssp CCCCEECCSSSSEEE----EEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSS----C--EEEEEECTTS
T ss_pred CCceEEeecCCCccc----eEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCC----c--cccceECCCC
Confidence 665544431111100 01111453 443443322 2347777777766654432211 1 1122332 56
Q ss_pred eEEEEEe-cCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCc-cccCCCcEEEEEeCCCCeE
Q 016752 264 CLYFSCL-CNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEE-DDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 264 ~L~~~~~-~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~-~~~~~~~~~~~ydl~~~~~ 341 (383)
+..++.. ... .+.||.++..-.+...+.. -......+.++++|+.|++.....++. ........++.||+++++.
T Consensus 185 ~~l~~~~~~~~--~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 185 RWIYFNSSRTG--QMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SEEEEEECTTS--SCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CEEEEEecCCC--CccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 6444443 233 7899998711122223322 112344566778888777763110000 0000125799999999887
Q ss_pred EEEE
Q 016752 342 ADQV 345 (383)
Q Consensus 342 ~~~v 345 (383)
+ .+
T Consensus 262 ~-~~ 264 (297)
T 2ojh_A 262 E-TL 264 (297)
T ss_dssp E-EE
T ss_pred e-ee
Confidence 7 54
No 69
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=82.32 E-value=21 Score=29.98 Aligned_cols=198 Identities=11% Similarity=0.023 Sum_probs=101.5
Q ss_pred eeCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 105 IDSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 105 ~~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
++..+|.|.... ....++++++.++....+-... ...-.++.+|+..+ +++.... ....+.+++
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-------~~~p~~ia~d~~~~--~lyv~d~------~~~~I~~~~ 107 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-------LGSPEGIALDHLGR--TIFWTDS------QLDRIEVAK 107 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT-------CCCEEEEEEETTTT--EEEEEET------TTTEEEEEE
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC-------CCCccEEEEEecCC--eEEEEEC------CCCEEEEEE
Confidence 344566666555 3457888888776543332111 11234577776544 2333221 234677777
Q ss_pred cCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE
Q 016752 184 LRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN 260 (383)
Q Consensus 184 s~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~ 260 (383)
.....-+.+. ... . ....++.+ +|.+||...... ...|..+++.......+... ... . ...++.
T Consensus 108 ~~g~~~~~~~-~~~--~-~~P~~i~vd~~~g~lyv~~~~~~----~~~I~~~~~dg~~~~~~~~~-~~~-~---P~gia~ 174 (267)
T 1npe_A 108 MDGTQRRVLF-DTG--L-VNPRGIVTDPVRGNLYWTDWNRD----NPKIETSHMDGTNRRILAQD-NLG-L---PNGLTF 174 (267)
T ss_dssp TTSCSCEEEE-CSS--C-SSEEEEEEETTTTEEEEEECCSS----SCEEEEEETTSCCCEEEECT-TCS-C---EEEEEE
T ss_pred cCCCCEEEEE-ECC--C-CCccEEEEeeCCCEEEEEECCCC----CcEEEEEecCCCCcEEEEEC-CCC-C---CcEEEE
Confidence 7644322221 111 0 11134444 589999874321 13588899876554433211 111 1 123444
Q ss_pred E--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 261 F--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 261 ~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
. ++.|++...... .+.+..+++.-. ...+.. ...|.++..+++.+|+.. .....+..+|+++
T Consensus 175 d~~~~~lyv~d~~~~--~I~~~~~~g~~~-~~~~~~----~~~P~gi~~d~~~lyva~---------~~~~~v~~~d~~~ 238 (267)
T 1npe_A 175 DAFSSQLCWVDAGTH--RAECLNPAQPGR-RKVLEG----LQYPFAVTSYGKNLYYTD---------WKTNSVIAMDLAI 238 (267)
T ss_dssp ETTTTEEEEEETTTT--EEEEEETTEEEE-EEEEEC----CCSEEEEEEETTEEEEEE---------TTTTEEEEEETTT
T ss_pred cCCCCEEEEEECCCC--EEEEEecCCCce-EEEecC----CCCceEEEEeCCEEEEEE---------CCCCeEEEEeCCC
Confidence 3 467887775433 444444333211 111221 133566666678889884 4567899999998
Q ss_pred CeEEEEEE
Q 016752 339 QKAADQVT 346 (383)
Q Consensus 339 ~~~~~~v~ 346 (383)
++....+.
T Consensus 239 g~~~~~i~ 246 (267)
T 1npe_A 239 SKEMDTFH 246 (267)
T ss_dssp TEEEEEEC
T ss_pred CCceEEEc
Confidence 87663543
No 70
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.31 E-value=6.4 Score=39.22 Aligned_cols=113 Identities=13% Similarity=0.036 Sum_probs=60.1
Q ss_pred cceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEE
Q 016752 205 DGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDI 279 (383)
Q Consensus 205 ~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~i 279 (383)
.++.+ +|.|||..... ...|.++|+.......+... ... .. ..|+.. +++|+++..... .|
T Consensus 499 ~giavDp~~g~ly~td~~~-----~~~I~~~~~dG~~~~~l~~~-~l~-~P---nGlavd~~~~~LY~aD~~~~----~I 564 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE-NIQ-WP---NGITLDLLSGRLYWVDSKLH----SI 564 (699)
T ss_dssp CCEECCSSSSCCEECCCSS-----SCCEEBCCSSSCCCCEESCS-SCS-SC---CCEEECTTTCCEEEEETTTT----EE
T ss_pred ceEEEccCCCcEEEcccCC-----CCeEEEEeCCCCCeeEEEeC-CCC-Cc---cEEEEeccCCEEEEEecCCC----eE
Confidence 34544 68999975322 12488888865443333111 110 11 124443 578888775433 34
Q ss_pred EEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 280 WVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 280 W~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++.+ +.-. ..+.........|.++.-+++.||+.. .....|..+|..+++..
T Consensus 565 ~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~~lywtd---------~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 565 SSIDVNGGNR--KTILEDEKRLAHPFSLAVFEDKVFWTD---------IINEAIFSANRLTGSDV 618 (699)
T ss_dssp EEECSSSSCC--EEECCCSSSCSSCCCCEEETTEEEEEC---------STTTCEEEEETTTEEEE
T ss_pred EEEccCCCce--EEEEecCCcCCCceEeEEECCEEEEEe---------CCCCeEEEEEccCCCce
Confidence 4554 3211 222110112234555555667888884 45678999999887766
No 71
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.21 E-value=30 Score=31.56 Aligned_cols=179 Identities=13% Similarity=0.068 Sum_probs=94.0
Q ss_pred EEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCC
Q 016752 149 VDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDI 225 (383)
Q Consensus 149 ~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~ 225 (383)
..++++|...+ +|+.... ....+++++.....-+.+. ... .....++.+ +|.|||......
T Consensus 161 p~glavD~~~~--~lY~~d~------~~~~I~~~~~~g~~~~~l~-~~~---~~~P~~iavdp~~g~ly~td~~~~---- 224 (400)
T 3p5b_L 161 PDGLAVDWIHS--NIYWTDS------VLGTVSVADTKGVKRKTLF-REN---GSKPRAIVVDPVHGFMYWTDWGTP---- 224 (400)
T ss_dssp EEEEEEETTTT--EEEEEET------TTTEEEEECTTTCSEEEEE-ECS---SCCEEEEEEETTTTEEEEEECSSS----
T ss_pred cccEEEEecCC--ceEEEEC------CCCeEEEEeCCCCceEEEE-eCC---CCCcceEEEecccCeEEEEeCCCC----
Confidence 34677886544 3444331 2346777777665544332 100 001134444 689999874321
Q ss_pred ccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeE
Q 016752 226 ENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVK 301 (383)
Q Consensus 226 ~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~ 301 (383)
..|..+|+....-..+-. .... . ..-|+.. +++|+++..... .||..+ +.-.+...-.. .....
T Consensus 225 -~~I~~~~~dG~~~~~~~~-~~l~-~---P~glavd~~~~~lY~aD~~~~----~I~~~d~dG~~~~~~~~~~--~~l~~ 292 (400)
T 3p5b_L 225 -AKIKKGGLNGVDIYSLVT-ENIQ-W---PNGITLDLLSGRLYWVDSKLH----SISSIDVNGGNRKTILEDE--KRLAH 292 (400)
T ss_dssp -CCEEEEETTSCSCEEEEC-SSCS-C---EEEEEEETTTTEEEEEETTTT----EEEEEETTSCCCEEEEECS--STTSS
T ss_pred -CEEEEEeCCCCccEEEEE-CCCC-c---eEEEEEEeCCCEEEEEECCCC----EEEEEeCCCCccEEEEeCC--CCCCC
Confidence 249999987654433321 1111 1 1234554 678888865433 455554 43222211111 12345
Q ss_pred EEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEeccCCCeeeEEEEEccccc
Q 016752 302 ALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 302 ~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~~~~~~~~~~y~~sl~~ 366 (383)
|.++.-+++.||+.. .....+..+|..+++....+ ..+...- ..+.+|.+...+
T Consensus 293 P~gl~v~~~~lywtd---------~~~~~V~~~~~~~G~~~~~i-~~~~~~p-~~i~v~~~~~qp 346 (400)
T 3p5b_L 293 PFSLAVFEDKVFWTD---------IINEAIFSANRLTGSDVNLL-AENLLSP-EDMVLFHNLTQP 346 (400)
T ss_dssp EEEEEEETTEEEEEE---------SSSCSEEEEESSSCCCCEEE-ECSCSCE-EEEEEESGGGSC
T ss_pred CEEEEEeCCEEEEec---------CCCCeEEEEEcCCCCceEEE-ecCCCCC-ceEEEEeeccCC
Confidence 777766677888884 45668999996666544144 2333332 567777766544
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=82.17 E-value=26 Score=30.97 Aligned_cols=199 Identities=8% Similarity=0.047 Sum_probs=94.0
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCC------CCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFW------GDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~------~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+|+....+..+.|||..+++........ .............+.+.+..+.+-+ ... ....+.+|+.
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~-------~d~~i~iwd~ 129 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT-SSS-------FDKTLKVWDT 129 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE-EEE-------TTSEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE-EEe-------CCCeEEEeeC
Confidence 3443444566888888776543222100 0000001234445666664443322 222 2456788888
Q ss_pred CCCceEEeccCCCeeeec-CCcceeeCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-
Q 016752 185 RSNSWRRIRVDFPYYILH-GWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~-~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~- 261 (383)
.++.-...- ..+..... ...+..-+|.+...+..+. .|..+|+.+.... .+..... . -..+...
T Consensus 130 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~~~~~~~~~~~~~----~--v~~~~~~~ 196 (408)
T 4a11_B 130 NTLQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKSGSCSHILQGHRQ----E--ILAVSWSP 196 (408)
T ss_dssp TTTEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSS------SEEEEESSSSCCCEEECCCCS----C--EEEEEECS
T ss_pred CCCccceec-cCCCceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCCcceeeeecCCCC----c--EEEEEECC
Confidence 876533222 11110000 0011111333444333332 3888998766432 2221111 1 1123333
Q ss_pred CCe-EEEEEecCCCCcEEEEEeCCceeeeEEEcC-----------C---CCceeEEEEEEeCCCEEEEEeccCCCccccC
Q 016752 262 SGC-LYFSCLCNYPQPVDIWVLKGCWTKAFSFHR-----------S---VGDYVKALAYSKSEDKVLVDKFKYGEEDDDI 326 (383)
Q Consensus 262 ~G~-L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~-----------~---~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~ 326 (383)
+|. +.+...... .+.+|-++..=.....+.. . -.....-+.+.++|..++.. .
T Consensus 197 ~~~~ll~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----------~ 264 (408)
T 4a11_B 197 RYDYILATASADS--RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV----------G 264 (408)
T ss_dssp SCTTEEEEEETTS--CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE----------E
T ss_pred CCCcEEEEEcCCC--cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe----------c
Confidence 344 555555444 7999998711111122211 0 01345566777788777766 3
Q ss_pred CCcEEEEEeCCCCeEE
Q 016752 327 NRWELYWYDPQSQKAA 342 (383)
Q Consensus 327 ~~~~~~~ydl~~~~~~ 342 (383)
.++.+..||+.+++..
T Consensus 265 ~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 265 TDNRMRLWNSSNGENT 280 (408)
T ss_dssp TTSCEEEEETTTCCBC
T ss_pred CCCeEEEEECCCCccc
Confidence 6778999999887643
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.97 E-value=27 Score=31.03 Aligned_cols=186 Identities=10% Similarity=0.044 Sum_probs=93.3
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+|.++.......+.+++..+++....-... ......+.+.+... +- +... ....+.+|+..++
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~-~l-~~~~-------~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGH-------HGPISVLEFNDTNK-LL-LSAS-------DDGTLRIWHGGNG 279 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCC-------SSCEEEEEEETTTT-EE-EEEE-------TTSCEEEECSSSB
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccC-------CCceEEEEECCCCC-EE-EEEc-------CCCEEEEEECCCC
Confidence 3566666655667999998886543221111 12334566666433 22 2222 2345778887765
Q ss_pred ceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CC
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
.-...-....... ..+.+ +| ....+..+ ..|..+|+.+.+... +..+.. . -..+... +|
T Consensus 280 ~~~~~~~~~~~~i----~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~----~--i~~~~~s~~~ 342 (425)
T 1r5m_A 280 NSQNCFYGHSQSI----VSASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIVDGV----P--IFAGRISQDG 342 (425)
T ss_dssp SCSEEECCCSSCE----EEEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEECTTC----C--EEEEEECTTS
T ss_pred ccceEecCCCccE----EEEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEecccCCc----c--EEEEEEcCCC
Confidence 3211110000000 11222 55 33333332 248999998765433 222111 1 1122332 46
Q ss_pred eEEEEEecCCCCcEEEEEeC-Cc------------------eeeeEEEcCCCCc-eeEEEEEEeCCCEEEEEeccCCCcc
Q 016752 264 CLYFSCLCNYPQPVDIWVLK-GC------------------WTKAFSFHRSVGD-YVKALAYSKSEDKVLVDKFKYGEED 323 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~-~~------------------W~~~~~i~~~~~~-~~~~~~~~~~g~~v~l~~~~~~~~~ 323 (383)
.+.++..... .+.||.++ .. +.....+...... ...-+.+.++|..|+..
T Consensus 343 ~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-------- 412 (425)
T 1r5m_A 343 QKYAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA-------- 412 (425)
T ss_dssp SEEEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEE--------
T ss_pred CEEEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEE--------
Confidence 6666655444 79999987 22 1123333321111 56667777888776666
Q ss_pred ccCCCcEEEEEeCCC
Q 016752 324 DDINRWELYWYDPQS 338 (383)
Q Consensus 324 ~~~~~~~~~~ydl~~ 338 (383)
..++.+..||++.
T Consensus 413 --~~dg~i~iw~~~g 425 (425)
T 1r5m_A 413 --YSLQEGSVVAIPG 425 (425)
T ss_dssp --ESSSCCEEEECCC
T ss_pred --ecCceEEEEeecC
Confidence 3677889998863
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=81.43 E-value=14 Score=32.51 Aligned_cols=68 Identities=10% Similarity=0.198 Sum_probs=47.9
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|.+.++..... .+.||.++ ++|.....+.. -.....-+.+.++|+.++.. ..++.+..||+++++
T Consensus 19 ~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~----------~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 19 DRTQIAICPNNH--EVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTC----------GTDRNAYVWTLKGRT 85 (372)
T ss_dssp TSSEEEEECSSS--EEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEE----------ETTSCEEEEEEETTE
T ss_pred CCCEEEEEeCCC--EEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEE----------cCCCeEEEEECCCCe
Confidence 466555554444 89999998 77777777753 11345567777888877776 367789999999887
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 86 ~~ 87 (372)
T 1k8k_C 86 WK 87 (372)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=79.98 E-value=28 Score=29.95 Aligned_cols=190 Identities=12% Similarity=-0.034 Sum_probs=99.9
Q ss_pred eEEEecCCCcEEEEcC-CccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc-
Q 016752 111 LIALKNDENGIAFWNP-STKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS- 188 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~- 188 (383)
+|+....+..+.+||. .+++...+..... ......+.+.+ +.+- +... ....+.+|+..+..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~------~~~v~~l~~~~--~~~l-~s~~-------~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEA------NLGICRICKYG--DDKL-IAAS-------WDGLIEVIDPRNYGD 134 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCC------CSCEEEEEEET--TTEE-EEEE-------TTSEEEEECHHHHTT
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCC------CCceEEEEeCC--CCEE-EEEc-------CCCeEEEEccccccc
Confidence 4555555678999999 8888766654101 12334566776 4333 2222 23456777765400
Q ss_pred ------eEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCC-ce--eeEecCCCcCCcCCeeeeEEE
Q 016752 189 ------WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLES-EE--FQEVPLPHLEDKKNVLVMFVG 259 (383)
Q Consensus 189 ------Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~-e~--~~~i~~P~~~~~~~~~~~~L~ 259 (383)
.+.+. ... ....-.++.+++.....+... ..|..+|+.+ .. ......+... . -..+.
T Consensus 135 ~~~~~~~~~~~-~~~--~~~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~---~--i~~i~ 200 (342)
T 1yfq_A 135 GVIAVKNLNSN-NTK--VKNKIFTMDTNSSRLIVGMNN------SQVQWFRLPLCEDDNGTIEESGLKY---Q--IRDVA 200 (342)
T ss_dssp BCEEEEESCSS-SSS--SCCCEEEEEECSSEEEEEEST------TEEEEEESSCCTTCCCEEEECSCSS---C--EEEEE
T ss_pred ccccccCCeee-EEe--eCCceEEEEecCCcEEEEeCC------CeEEEEECCccccccceeeecCCCC---c--eeEEE
Confidence 11111 111 000012333333222222222 2488899887 32 3333322211 1 12334
Q ss_pred EE--CCeEEEEEecCCCCcEEEEEeCCc-----eeeeEEEcCC-C-------CceeEEEEEEeCCCEEEEEeccCCCccc
Q 016752 260 NF--SGCLYFSCLCNYPQPVDIWVLKGC-----WTKAFSFHRS-V-------GDYVKALAYSKSEDKVLVDKFKYGEEDD 324 (383)
Q Consensus 260 ~~--~G~L~~~~~~~~~~~l~iW~l~~~-----W~~~~~i~~~-~-------~~~~~~~~~~~~g~~v~l~~~~~~~~~~ 324 (383)
.. +|.+.++..... .+.||.++.. ......+... . ......+.++++|+.|+..
T Consensus 201 ~~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--------- 269 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA--------- 269 (342)
T ss_dssp ECSGGGCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE---------
T ss_pred ECCCCCCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe---------
Confidence 43 567666666544 8999999822 3444444431 0 0145566777888776666
Q ss_pred cCCCcEEEEEeCCCCeEE
Q 016752 325 DINRWELYWYDPQSQKAA 342 (383)
Q Consensus 325 ~~~~~~~~~ydl~~~~~~ 342 (383)
..++.+..||+++++..
T Consensus 270 -~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 270 -GSDGIISCWNLQTRKKI 286 (342)
T ss_dssp -ETTSCEEEEETTTTEEE
T ss_pred -cCCceEEEEcCccHhHh
Confidence 36778999999988866
No 76
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=79.52 E-value=29 Score=29.75 Aligned_cols=202 Identities=11% Similarity=0.075 Sum_probs=99.2
Q ss_pred eCcCe-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 106 DSCNG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 106 ~s~~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+..+| |+........++.++|.|++...+.... ...++++++..+ -+++ . ...+.+|+.
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~---------~~~~i~~~~dG~--l~v~-~--------~~~l~~~d~ 80 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA---------PVSSVALRQSGG--YVAT-I--------GTKFCALNW 80 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS---------CEEEEEEBTTSS--EEEE-E--------TTEEEEEET
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC---------ceEEEEECCCCC--EEEE-E--------CCeEEEEEC
Confidence 34344 4444445568999999998876554321 123466676443 2222 1 246788999
Q ss_pred CCCceEEeccCCCeeee-cCCcceee--CceEEEEEecCCC-----CCCccEEEEEECCCceeeEecCCCcCCcCCeeee
Q 016752 185 RSNSWRRIRVDFPYYIL-HGWDGTFA--DGHVHWLVTNNPK-----DDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVM 256 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~-~~~~~v~~--~G~lywl~~~~~~-----~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 256 (383)
.++.++.+. ..+.... .....+.+ +|.+|+-...... ......|..+|.... ...+. ... .. ..
T Consensus 81 ~~g~~~~~~-~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~---~~-pn 152 (297)
T 3g4e_A 81 KEQSAVVLA-TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQV---DI-SN 152 (297)
T ss_dssp TTTEEEEEE-ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEE---SB-EE
T ss_pred CCCcEEEEE-ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--ecc---cc-cc
Confidence 888887664 2211000 00022323 6886654432210 012345888887643 22221 000 00 11
Q ss_pred EEEEE-CCe-EEEEEecCCCCcEEEEEeC---CceeeeEEE-cCC-CCceeEEEEEEeCCCEEEEEeccCCCccccCCCc
Q 016752 257 FVGNF-SGC-LYFSCLCNYPQPVDIWVLK---GCWTKAFSF-HRS-VGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRW 329 (383)
Q Consensus 257 ~L~~~-~G~-L~~~~~~~~~~~l~iW~l~---~~W~~~~~i-~~~-~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~ 329 (383)
.++.. +|+ |+++..... .+.+|.++ +.......+ ... ......-+++..+| .|++.. ....
T Consensus 153 gi~~spdg~~lyv~~~~~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~---------~~~~ 220 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSY--SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVAC---------YNGG 220 (297)
T ss_dssp EEEECTTSCEEEEEEGGGT--EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEE---------ETTT
T ss_pred ceEEcCCCCEEEEecCCCC--cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEE---------cCCC
Confidence 23333 454 665554433 56666664 443322222 110 01223334455565 577774 3466
Q ss_pred EEEEEeCCCCeEEEEEEE
Q 016752 330 ELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 330 ~~~~ydl~~~~~~~~v~~ 347 (383)
.+..||++++++...+..
T Consensus 221 ~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp EEEEECTTTCCEEEEEEC
T ss_pred EEEEEcCCCceEEEEEEC
Confidence 899999997665525544
No 77
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=78.66 E-value=28 Score=29.16 Aligned_cols=160 Identities=10% Similarity=0.077 Sum_probs=82.5
Q ss_pred EEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCC
Q 016752 149 VDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDI 225 (383)
Q Consensus 149 ~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~ 225 (383)
..++.+|+..+ +++.... ....+.+|+..++.-+... .... ....++.+ +|.+||......
T Consensus 38 ~~gi~~d~~~~--~ly~~d~------~~~~I~~~~~~g~~~~~~~-~~~~---~~p~~ia~d~~~~~lyv~d~~~~---- 101 (267)
T 1npe_A 38 IIGLAFDCVDK--VVYWTDI------SEPSIGRASLHGGEPTTII-RQDL---GSPEGIALDHLGRTIFWTDSQLD---- 101 (267)
T ss_dssp EEEEEEETTTT--EEEEEET------TTTEEEEEESSSCCCEEEE-CTTC---CCEEEEEEETTTTEEEEEETTTT----
T ss_pred EEEEEEecCCC--EEEEEEC------CCCEEEEEecCCCCcEEEE-ECCC---CCccEEEEEecCCeEEEEECCCC----
Confidence 34677786544 2333321 2346777777654322221 1100 01134444 579999875432
Q ss_pred ccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEE
Q 016752 226 ENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKAL 303 (383)
Q Consensus 226 ~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~ 303 (383)
.|..+|+....-..+. +.... . ...++.. +|.|++.........+....+++.-.+.. ....+ ....-+
T Consensus 102 --~I~~~~~~g~~~~~~~-~~~~~-~---P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~-~~~~~-~~P~gi 172 (267)
T 1npe_A 102 --RIEVAKMDGTQRRVLF-DTGLV-N---PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL-AQDNL-GLPNGL 172 (267)
T ss_dssp --EEEEEETTSCSCEEEE-CSSCS-S---EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE-ECTTC-SCEEEE
T ss_pred --EEEEEEcCCCCEEEEE-ECCCC-C---ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE-EECCC-CCCcEE
Confidence 5999998765433331 21111 1 1234444 57888876542222454444554332221 11111 223345
Q ss_pred EEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 304 AYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 304 ~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++.++++.||+.. .....+..+|+.+...+
T Consensus 173 a~d~~~~~lyv~d---------~~~~~I~~~~~~g~~~~ 202 (267)
T 1npe_A 173 TFDAFSSQLCWVD---------AGTHRAECLNPAQPGRR 202 (267)
T ss_dssp EEETTTTEEEEEE---------TTTTEEEEEETTEEEEE
T ss_pred EEcCCCCEEEEEE---------CCCCEEEEEecCCCceE
Confidence 5556678899984 45678999999877655
No 78
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=78.63 E-value=29 Score=29.25 Aligned_cols=203 Identities=7% Similarity=0.051 Sum_probs=102.1
Q ss_pred CcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
+.+|-+.+.. ....+.++||..+....++....... ......++.++...+ +++.... .....+.+|+..
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~--~~~~p~~i~~~~~~g--~l~v~~~-----~~~~~i~~~d~~ 108 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDS--QLLYPNRVAVVRNSG--DIIVTER-----SPTHQIQIYNQY 108 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTT--CBSSEEEEEEETTTT--EEEEEEC-----GGGCEEEEECTT
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcc--cccCceEEEEEcCCC--eEEEEcC-----CCCCEEEEECCC
Confidence 3355555443 44578899988666666654321110 012234566653333 2322221 013567778743
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-C
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-S 262 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~ 262 (383)
...-+... ..... ...++.+ +|.+|...... ..|..||...+....+..+.... . ...++.. +
T Consensus 109 g~~~~~~~-~~~~~---~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~-~---p~~i~~~~~ 174 (286)
T 1q7f_A 109 GQFVRKFG-ATILQ---HPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLE-F---PNGVVVNDK 174 (286)
T ss_dssp SCEEEEEC-TTTCS---CEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCS-S---EEEEEECSS
T ss_pred CcEEEEec-CccCC---CceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccC-C---cEEEEECCC
Confidence 33322232 11000 0023333 67776654332 24999998877666665432221 1 1234443 5
Q ss_pred CeEEEEEecCCCCcEEEEEeCCceeeeEEEcCC-CCceeEEEEEEeCCCEEEEEeccCCCccccCCCc-EEEEEeCCCCe
Q 016752 263 GCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRS-VGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRW-ELYWYDPQSQK 340 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~-~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~-~~~~ydl~~~~ 340 (383)
|.|++...... .+.+|..++... ..+... ......-+++.++|. +++.. .... .+..||.+.+.
T Consensus 175 g~l~v~~~~~~--~i~~~~~~g~~~--~~~~~~g~~~~p~~i~~d~~G~-l~v~~---------~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 175 QEIFISDNRAH--CVKVFNYEGQYL--RQIGGEGITNYPIGVGINSNGE-ILIAD---------NHNNFNLTIFTQDGQL 240 (286)
T ss_dssp SEEEEEEGGGT--EEEEEETTCCEE--EEESCTTTSCSEEEEEECTTCC-EEEEE---------CSSSCEEEEECTTSCE
T ss_pred CCEEEEECCCC--EEEEEcCCCCEE--EEEccCCccCCCcEEEECCCCC-EEEEe---------CCCCEEEEEECCCCCE
Confidence 88777665444 677777664332 233221 002233455556664 67663 2444 89999998877
Q ss_pred EEEEEEE
Q 016752 341 AADQVTI 347 (383)
Q Consensus 341 ~~~~v~~ 347 (383)
+. .+..
T Consensus 241 ~~-~~~~ 246 (286)
T 1q7f_A 241 IS-ALES 246 (286)
T ss_dssp EE-EEEE
T ss_pred EE-EEcc
Confidence 77 6644
No 79
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=78.61 E-value=52 Score=32.13 Aligned_cols=195 Identities=10% Similarity=0.076 Sum_probs=99.3
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC-ceEEeccCCC
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN-SWRRIRVDFP 197 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~-~Wr~~~~~~p 197 (383)
..++++|..|++...+...... ......+.+.|.. ++-++... +.......+.+++..++ ..+.+.....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~spdg-~~l~~~~~---~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-----EKFLTNLSWSPDE-NILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-----TCEEEEEEECTTS-SEEEEEEE---CTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred eEEEEEECCCCceEeeccCCCC-----ceeEeeEEEECCC-CEEEEEEe---CCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 4699999999987766532211 1233346666543 33322221 11223457788888887 6665531100
Q ss_pred eeeecCCcceee----CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CC-eEEEEEec
Q 016752 198 YYILHGWDGTFA----DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SG-CLYFSCLC 271 (383)
Q Consensus 198 ~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G-~L~~~~~~ 271 (383)
.........+.+ +|.+.+..... ....|..+|...+....+.... ... ...+... +| .|++....
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~----g~~~l~~~~~~~~~~~~l~~~~----~~v-~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRD----GWNHLYLYDTTGRLIRQVTKGE----WEV-TNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTT----SSCEEEEEETTSCEEEECCCSS----SCE-EEEEEECTTSSEEEEEESS
T ss_pred CCeECccCCceeecCCCCEEEEEEccC----CccEEEEEECCCCEEEecCCCC----eEE-EeeeEEcCCCCEEEEEecC
Confidence 000000112222 78866655433 2345888887777666553211 111 1012332 45 45555544
Q ss_pred CCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 272 NYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 272 ~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.......||.++ +. ...+.. ......+.++++|+.+++..... .....++.+|+++++.+
T Consensus 377 ~~~~~~~l~~~d~~~~~---~~~l~~--~~~~~~~~~spdg~~l~~~~~~~------~~p~~i~l~d~~~~~~~ 439 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGGK---TKDLTP--ESGMHRTQLSPDGSAIIDIFQSP------TVPRKVTVTNIGKGSHT 439 (706)
T ss_dssp SCTTCBEEEEEETTCCC---CEESCC--SSSEEEEEECTTSSEEEEEEECS------SCSCEEEEEESSSCEEE
T ss_pred CCCceEEEEEEEcCCCC---ceeccC--CCceEEEEECCCCCEEEEEecCC------CCCcEEEEEECCCCeEe
Confidence 332246788776 33 223332 12244567778888776652100 12356999999888733
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=78.30 E-value=33 Score=29.66 Aligned_cols=52 Identities=13% Similarity=0.361 Sum_probs=30.5
Q ss_pred cEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCC----CEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 276 PVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSE----DKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 276 ~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g----~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
.+.||.++ +.|.....+.. -.....-+++++++ ..|.-. ..++.+..||+++
T Consensus 190 ~v~lWd~~~~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~~~~las~----------s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 190 LIKLWKEEEDGQWKEEQKLEA-HSDWVRDVAWAPSIGLPTSTIASC----------SQDGRVFIWTCDD 247 (316)
T ss_dssp BCCEEEECTTSCEEEEECCBC-CSSCEEEEECCCCSSCSCCEEEEE----------ETTCEEEEEECSS
T ss_pred eEEEEEeCCCCccceeeeccc-CCCceEEEEecCCCCCCCceEEEE----------cCCCeEEEEEccC
Confidence 89999997 56766554432 01234445555554 334434 3566788887765
No 81
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=77.77 E-value=56 Score=32.06 Aligned_cols=195 Identities=10% Similarity=0.042 Sum_probs=99.0
Q ss_pred cEEEEcCCccce--eecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCC
Q 016752 120 GIAFWNPSTKEH--LILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFP 197 (383)
Q Consensus 120 ~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p 197 (383)
.+++++.-|++. +.+-..+.. .....+..+.+. ++|.++.... . .....+.+++..++.|+.+.....
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~-----~~~~~~~~~SpD-G~~l~~~~~~---~-~~~~~l~~~~~~~~~~~~l~~~~~ 272 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD-----PTTFLQSDLSRD-GKYLFVYILR---G-WSENDVYWKRPGEKDFRLLVKGVG 272 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC-----TTCEEEEEECTT-SCCEEEEEEE---T-TTEEEEEEECTTCSSCEEEEECSS
T ss_pred EEEEEECCCCchhceEEEecCCC-----CEEEEEEEECCC-CCEEEEEEeC---C-CCceEEEEEcCCCCceEEeecCCC
Confidence 388888887762 222221111 112334555553 3455444331 1 023445555555677877752111
Q ss_pred eeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce---eeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCC
Q 016752 198 YYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE---FQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYP 274 (383)
Q Consensus 198 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~ 274 (383)
. ...++.-+|.+|+.+... .....|+.+|+.+.. |..+-.+... .. ...+...+|.|.+......
T Consensus 273 ~----~~~~~~~~g~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~-l~~~~~~~~~lv~~~~~dg- 340 (695)
T 2bkl_A 273 A----KYEVHAWKDRFYVLTDEG---APRQRVFEVDPAKPARASWKEIVPEDSS---AS-LLSVSIVGGHLSLEYLKDA- 340 (695)
T ss_dssp C----CEEEEEETTEEEEEECTT---CTTCEEEEEBTTBCSGGGCEEEECCCSS---CE-EEEEEEETTEEEEEEEETT-
T ss_pred c----eEEEEecCCcEEEEECCC---CCCCEEEEEeCCCCCccCCeEEecCCCC---Ce-EEEEEEECCEEEEEEEECC-
Confidence 0 112334566666654422 123469999997654 6655333211 11 1123445888887776655
Q ss_pred CcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 275 QPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 275 ~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
...||.++ +. ....+...-......+++.++++.+++..... .....++.||+.+++.+ .+.
T Consensus 341 -~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~------~~P~~v~~~d~~~g~~~-~l~ 404 (695)
T 2bkl_A 341 -TSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSF------TTPRQIYKTSVSTGKSE-LWA 404 (695)
T ss_dssp -EEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEET------TEEEEEEEEETTTCCEE-EEE
T ss_pred -EEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCC------CCCCEEEEEECCCCcEE-EEe
Confidence 67888887 32 33344321011222233345677777662100 12357999999998876 553
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=77.53 E-value=42 Score=30.48 Aligned_cols=188 Identities=11% Similarity=0.095 Sum_probs=94.0
Q ss_pred eeeCcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 104 IIDSCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 104 ~~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
-+...+.+|+....+..+.|||..|++...--... ......+.+++ + .++... ....+.+|+
T Consensus 178 ~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~---~-~l~s~s-------~dg~i~vwd 239 (435)
T 1p22_A 178 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHH-------CEAVLHLRFNN---G-MMVTCS-------KDRSIAVWD 239 (435)
T ss_dssp EEECCSSEEEEEETTSCEEEEESSSCCEEEEECCC-------CSCEEEEECCT---T-EEEEEE-------TTSCEEEEE
T ss_pred EEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-------CCcEEEEEEcC---C-EEEEee-------CCCcEEEEe
Confidence 33444455555556678999999988764322111 11233344442 2 222222 234677888
Q ss_pred cCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEEC
Q 016752 184 LRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNFS 262 (383)
Q Consensus 184 s~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~~ 262 (383)
..++.-........ .....-..+.++|.....+..+. .|..+|+.+.+.. .+..... .+.-...+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~~-------~v~~~~~~ 305 (435)
T 1p22_A 240 MASPTDITLRRVLV-GHRAAVNVVDFDDKYIVSASGDR------TIKVWNTSTCEFVRTLNGHKR-------GIACLQYR 305 (435)
T ss_dssp CSSSSCCEEEEEEC-CCSSCEEEEEEETTEEEEEETTS------EEEEEETTTCCEEEEEECCSS-------CEEEEEEE
T ss_pred CCCCCCceeeeEec-CCCCcEEEEEeCCCEEEEEeCCC------eEEEEECCcCcEEEEEcCCCC-------cEEEEEeC
Confidence 87653211000000 00000134455666555554432 4889999876543 2332111 11222336
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
|.+.++...+. .+.+|-++ +. ...++..- ..... ++.-+++.++.. ..++.+..||+++.+
T Consensus 306 ~~~l~~g~~dg--~i~iwd~~~~~--~~~~~~~h-~~~v~--~~~~~~~~l~sg----------~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 306 DRLVVSGSSDN--TIRLWDIECGA--CLRVLEGH-EELVR--CIRFDNKRIVSG----------AYDGKIKVWDLVAAL 367 (435)
T ss_dssp TTEEEEEETTS--CEEEEETTTCC--EEEEECCC-SSCEE--EEECCSSEEEEE----------ETTSCEEEEEHHHHT
T ss_pred CCEEEEEeCCC--eEEEEECCCCC--EEEEEeCC-cCcEE--EEEecCCEEEEE----------eCCCcEEEEECCCCC
Confidence 66666665555 79999988 42 23333320 11122 222266666666 367788899986654
No 83
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=76.98 E-value=39 Score=29.91 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=71.7
Q ss_pred cEEEEEEcCCC--ceEEeccCCCeee-------ecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCC
Q 016752 177 TEVSVYSLRSN--SWRRIRVDFPYYI-------LHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPH 246 (383)
Q Consensus 177 ~~~~vyss~~~--~Wr~~~~~~p~~~-------~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~ 246 (383)
..+..|+..++ .|+... ..|... .....++..+|.+|.....+ .+.++|..+.+... .+.+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-------~l~~~d~~tG~~~w~~~~~~ 269 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-------NLTALDLRSGQIMWKRELGS 269 (376)
T ss_dssp TEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEEETTEEEEECTTS-------CEEEEETTTCCEEEEECCCC
T ss_pred CEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEEECCEEEEEecCc-------EEEEEECCCCcEEeeccCCC
Confidence 45667777665 577553 222110 01235677788888865443 39999997764332 22221
Q ss_pred cCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCcc
Q 016752 247 LEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEED 323 (383)
Q Consensus 247 ~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~ 323 (383)
...+...+|.|++.... . .+..+-.+ ..|.... ... .....|+. .++.|++.
T Consensus 270 --------~~~~~~~~~~l~~~~~~-g--~l~~~d~~tG~~~w~~~~-~~~--~~~~~~~~---~~~~l~v~-------- 324 (376)
T 3q7m_A 270 --------VNDFIVDGNRIYLVDQN-D--RVMALTIDGGVTLWTQSD-LLH--RLLTSPVL---YNGNLVVG-------- 324 (376)
T ss_dssp --------EEEEEEETTEEEEEETT-C--CEEEEETTTCCEEEEECT-TTT--SCCCCCEE---ETTEEEEE--------
T ss_pred --------CCCceEECCEEEEEcCC-C--eEEEEECCCCcEEEeecc-cCC--CcccCCEE---ECCEEEEE--------
Confidence 11344556777666532 1 33333333 3354220 010 01112222 24678888
Q ss_pred ccCCCcEEEEEeCCCCeEEEEEEE
Q 016752 324 DDINRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 324 ~~~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
..++.++.+|++++++..+..+
T Consensus 325 --~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 325 --DSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp --CTTSEEEEEETTTCCEEEEEEC
T ss_pred --eCCCeEEEEECCCCcEEEEEec
Confidence 3677899999999987634333
No 84
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.46 E-value=54 Score=31.22 Aligned_cols=198 Identities=12% Similarity=0.055 Sum_probs=101.9
Q ss_pred cCeeEEEec-CCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc-
Q 016752 108 CNGLIALKN-DENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL- 184 (383)
Q Consensus 108 ~~GLll~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss- 184 (383)
-+|.+++.. ....+.|+|+.|++.. .++... . ..++.++|.. +|-.+. . ....+.+|+.
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-------~--~~~v~~spdg-~~l~v~-~-------~d~~V~v~D~~ 208 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-------A--VHISRMSASG-RYLLVI-G-------RDARIDMIDLW 208 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-------T--EEEEEECTTS-CEEEEE-E-------TTSEEEEEETT
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-------c--cceEEECCCC-CEEEEE-C-------CCCeEEEEECc
Confidence 366666554 4567999999998765 333211 1 2346666643 333332 2 1266888988
Q ss_pred -CCCceEEeccCCCeeeecCCcceee------CceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcC-Cc-----
Q 016752 185 -RSNSWRRIRVDFPYYILHGWDGTFA------DGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLE-DK----- 250 (383)
Q Consensus 185 -~~~~Wr~~~~~~p~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~-~~----- 250 (383)
.++. .+. .++... ...++.+ +|..-+...... ..|..+|..+.+. ..++.+... ..
T Consensus 209 ~~t~~--~~~-~i~~g~--~p~~va~sp~~~~dg~~l~v~~~~~-----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~ 278 (543)
T 1nir_A 209 AKEPT--KVA-EIKIGI--EARSVESSKFKGYEDRYTIAGAYWP-----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHP 278 (543)
T ss_dssp SSSCE--EEE-EEECCS--EEEEEEECCSTTCTTTEEEEEEEES-----SEEEEEETTTCCEEEEEECCEECSSSCCEES
T ss_pred CCCCc--EEE-EEecCC--CcceEEeCCCcCCCCCEEEEEEccC-----CeEEEEeccccccceeecccCcccCcccccc
Confidence 5543 222 111100 0022222 565434443211 2488999877554 445543211 10
Q ss_pred CCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCC
Q 016752 251 KNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINR 328 (383)
Q Consensus 251 ~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~ 328 (383)
... -..+... +|...++..... ..+.+|-+. ..-.++.+++. +...+-++++++|..++... ..+
T Consensus 279 ~~~-v~~i~~s~~~~~~~vs~~~~-g~i~vvd~~~~~~l~~~~i~~--~~~~~~~~~spdg~~l~va~---------~~~ 345 (543)
T 1nir_A 279 EPR-VAAIIASHEHPEFIVNVKET-GKVLLVNYKDIDNLTVTSIGA--APFLHDGGWDSSHRYFMTAA---------NNS 345 (543)
T ss_dssp CCC-EEEEEECSSSSEEEEEETTT-TEEEEEECTTSSSCEEEEEEC--CSSCCCEEECTTSCEEEEEE---------GGG
T ss_pred CCc-eEEEEECCCCCEEEEEECCC-CeEEEEEecCCCcceeEEecc--CcCccCceECCCCCEEEEEe---------cCC
Confidence 001 1123333 344444444333 267677665 32233335543 23345577888888777763 246
Q ss_pred cEEEEEeCCCCeEEEEEE
Q 016752 329 WELYWYDPQSQKAADQVT 346 (383)
Q Consensus 329 ~~~~~ydl~~~~~~~~v~ 346 (383)
..+.++|++++++...+.
T Consensus 346 ~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCeEEEeec
Confidence 689999999999883443
No 85
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=75.96 E-value=42 Score=29.77 Aligned_cols=214 Identities=12% Similarity=0.009 Sum_probs=110.4
Q ss_pred eCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 106 DSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 106 ~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+..+|.|...+ ....++.+++.++....+...... ...++++|+..+ +++.... ....+++++.
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-------~p~glavd~~~g--~ly~~d~------~~~~I~~~~~ 145 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-------SPGGLAVDWVHD--KLYWTDS------GTSRIEVANL 145 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-------CCCEEEEETTTT--EEEEEET------TTTEEEEEET
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCCC-------CccEEEEecCCC--eEEEEcC------CCCeEEEEcC
Confidence 44567666665 345688888877664444322111 223577786554 3333321 2346777777
Q ss_pred CCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF 261 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 261 (383)
....-+.+. ... + ....++.+ +|.+||..... ...|..+|+....-..+- ..... . ..-|+..
T Consensus 146 dG~~~~~l~-~~~--l-~~P~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~-~~~~~-~---PnGla~d 211 (349)
T 3v64_C 146 DGAHRKVLL-WQS--L-EKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIA-DTHLF-W---PNGLTID 211 (349)
T ss_dssp TSCSCEEEE-CTT--C-SCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESC-CSSCS-C---EEEEEEE
T ss_pred CCCceEEEE-eCC--C-CCcceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEE-ECCCC-C---cceEEEe
Confidence 654322222 100 0 01133433 68999987543 135999998765444331 11111 1 1234554
Q ss_pred --CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 262 --SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 262 --~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
+|+|+++..... .+...-++++-.+. .+.. ....|.++.-+++.||+.. .....+..+|..++
T Consensus 212 ~~~~~lY~aD~~~~--~I~~~~~dG~~~~~-~~~~---~~~~P~giav~~~~ly~td---------~~~~~V~~~~~~~G 276 (349)
T 3v64_C 212 YAGRRMYWVDAKHH--VIERANLDGSHRKA-VISQ---GLPHPFAITVFEDSLYWTD---------WHTKSINSANKFTG 276 (349)
T ss_dssp TTTTEEEEEETTTT--EEEEEETTSCSCEE-EECS---SCSSEEEEEEETTEEEEEE---------TTTTEEEEEETTTC
T ss_pred CCCCEEEEEECCCC--EEEEEeCCCCceEE-EEeC---CCCCceEEEEECCEEEEec---------CCCCeEEEEEccCC
Confidence 688888875433 44444444422211 1221 1234666554567888885 46778999995555
Q ss_pred eEEEEEEEeccCCCeeeEEEEEcccc
Q 016752 340 KAADQVTIHGVPQGCRDTLVCVDSLV 365 (383)
Q Consensus 340 ~~~~~v~~~~~~~~~~~~~~y~~sl~ 365 (383)
+..+.+. .+...- ..+.+|.++..
T Consensus 277 ~~~~~i~-~~~~~p-~gi~v~~~~~q 300 (349)
T 3v64_C 277 KNQEIIR-NKLHFP-MDIHTLHPQRQ 300 (349)
T ss_dssp CSCEEEE-CSCSCC-CCEEEECGGGS
T ss_pred CccEEec-cCCCCC-ceEEEEccccC
Confidence 4431443 233232 45666766543
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.71 E-value=6.4 Score=35.04 Aligned_cols=139 Identities=10% Similarity=0.126 Sum_probs=67.6
Q ss_pred cEEEEEEcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCce-eeEe-cCCCcCCcCC
Q 016752 177 TEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEV-PLPHLEDKKN 252 (383)
Q Consensus 177 ~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i-~~P~~~~~~~ 252 (383)
..+.+|+..++.|+... .+.... ..-..+.+ +|.+-..+..+. .|..+|+.++. +..+ .+.... ..
T Consensus 33 ~~i~iw~~~~~~~~~~~-~~~~h~-~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~~--~~ 102 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHAR-TFSDHD-KIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRLN--RA 102 (377)
T ss_dssp SCBCEEEEETTEEEECC-CBCCCS-SCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCCS--SC
T ss_pred CEEEEEEccCCceEEEE-EEecCC-ceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEecccC--Cc
Confidence 45678888888777655 222100 00012222 344333333322 28888888766 3222 111111 11
Q ss_pred eeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCc
Q 016752 253 VLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRW 329 (383)
Q Consensus 253 ~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~ 329 (383)
-..+... +|.+.+...... .+.+|.++ ..|.....+...-.....-+.+.++|..++.. ..++
T Consensus 103 --v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----------~~d~ 168 (377)
T 3dwl_C 103 --ATFVRWSPNEDKFAVGSGAR--VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG----------CADR 168 (377)
T ss_dssp --EEEEECCTTSSCCEEEESSS--CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE----------ESSS
T ss_pred --eEEEEECCCCCEEEEEecCC--eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE----------eCCC
Confidence 1122222 566555555444 79999998 55776666653112345566777777766666 3567
Q ss_pred EEEEEeCCCC
Q 016752 330 ELYWYDPQSQ 339 (383)
Q Consensus 330 ~~~~ydl~~~ 339 (383)
.+..||++++
T Consensus 169 ~i~iwd~~~~ 178 (377)
T 3dwl_C 169 KAYVLSAYVR 178 (377)
T ss_dssp CEEEEEECCS
T ss_pred EEEEEEEEec
Confidence 8899998643
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=75.61 E-value=39 Score=29.17 Aligned_cols=185 Identities=10% Similarity=0.050 Sum_probs=89.2
Q ss_pred CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCC--CCEEEEEEEEEeecCCcccEEEEEEcCCCc--eEEec
Q 016752 118 ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVN--DDYKVFRLVQFVRENVEYTEVSVYSLRSNS--WRRIR 193 (383)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~--~~ykVv~~~~~~~~~~~~~~~~vyss~~~~--Wr~~~ 193 (383)
+..+.|||..+++...+..... ......+.+.+.. +.+-+.+ . ....+.+|+..++. -....
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~-~-------~dg~i~iwd~~~~~~~~~~~~ 108 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEK------AKPIKCGTFGATSLQQRYLATG-D-------FGGNLHIWNLEAPEMPVYSVK 108 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEE------SSCEEEEECTTCCTTTCCEEEE-E-------TTSCEEEECTTSCSSCSEEEC
T ss_pred CcEEEEEeCCCCcccceeeecc------cCcEEEEEEcCCCCCCceEEEe-c-------CCCeEEEEeCCCCCccEEEEE
Confidence 4568888888877654322111 1133446666653 3333322 2 23457788887654 22221
Q ss_pred cC-CC-eeeecCC-cceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEecCCCcCCcCCeeeeEEE-----EECC
Q 016752 194 VD-FP-YYILHGW-DGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEVPLPHLEDKKNVLVMFVG-----NFSG 263 (383)
Q Consensus 194 ~~-~p-~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~-----~~~G 263 (383)
.. -+ ....... -...-+|..-..+..+. .|..+|+.+.. ...+..+........ ..+. ..+|
T Consensus 109 ~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 109 GHKEIINAIDGIGGLGIGEGAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDC--WTVAFGNAYNQEE 180 (357)
T ss_dssp CCSSCEEEEEEESGGGCC-CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCE--EEEEEECCCC-CC
T ss_pred ecccceEEEeeccccccCCCccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCce--EEEEEEeccCCCC
Confidence 00 00 0000000 01122444433333332 38899998764 444443332211111 1222 1366
Q ss_pred eEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEe---CCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 264 CLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSK---SEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~---~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
.+.++..... .+.+|-++ +.= ...... .....-+.+.+ +++.++.. ..++.+..||++++
T Consensus 181 ~~l~~~~~d~--~i~i~d~~~~~~--~~~~~~--~~~v~~~~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 181 RVVCAGYDNG--DIKLFDLRNMAL--RWETNI--KNGVCSLEFDRKDISMNKLVAT----------SLEGKFHVFDMRTQ 244 (357)
T ss_dssp CEEEEEETTS--EEEEEETTTTEE--EEEEEC--SSCEEEEEESCSSSSCCEEEEE----------ESTTEEEEEEEEEE
T ss_pred CEEEEEccCC--eEEEEECccCce--eeecCC--CCceEEEEcCCCCCCCCEEEEE----------CCCCeEEEEeCcCC
Confidence 7666665544 89999988 321 111221 12344556666 66766666 35667888887665
Q ss_pred e
Q 016752 340 K 340 (383)
Q Consensus 340 ~ 340 (383)
+
T Consensus 245 ~ 245 (357)
T 3i2n_A 245 H 245 (357)
T ss_dssp E
T ss_pred C
Confidence 4
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=75.51 E-value=38 Score=29.02 Aligned_cols=92 Identities=9% Similarity=0.066 Sum_probs=47.6
Q ss_pred EEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcC-----CC---C
Q 016752 228 LIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHR-----SV---G 297 (383)
Q Consensus 228 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~-----~~---~ 297 (383)
.|..+|+.+..... +.... . -..+....+...++..... .+.||-++ ..-. ..+.. .. .
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~-----~--v~~~~~~~~~~~~~~~~d~--~i~iwd~~~~~~~--~~~~~~~~~~~~~~h~ 306 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGD-----I--INALCFSPNRYWLCAATGP--SIKIWDLEGKIIV--DELKQEVISTSSKAEP 306 (340)
T ss_dssp EEEEEETTTTEEEEEEECSS-----C--EEEEEECSSSSEEEEEETT--EEEEEETTTTEEE--EEECCC-------CCC
T ss_pred eEEEEEeccCceeeeecCCc-----e--EEeeecCCCCceeeccCCC--EEEEEECCCCeEE--EeccccceeeeccCCC
Confidence 48888887765332 22211 1 1122333333333333333 78999887 3211 11111 00 1
Q ss_pred ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 298 DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 298 ~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
..+.-++++++|..|+-. ..++.+..||++|++
T Consensus 307 ~~v~~l~~s~dg~~l~sg----------s~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 307 PQCTSLAWSADGQTLFAG----------YTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCEEEEEECTTSSEEEEE----------ETTSCEEEEEEEC--
T ss_pred CCEEEEEECCCCCEEEEE----------eCCCEEEEEeCCCcC
Confidence 334556777888876665 367789999998875
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.19 E-value=40 Score=29.14 Aligned_cols=193 Identities=10% Similarity=0.063 Sum_probs=92.7
Q ss_pred Ce-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+| +|+....+..+.|||..+++...+.... .....+.+.+..+.-.++... ....+.+|+.+++
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHD--------APVKTIHWIKAPNYSCVMTGS-------WDKTLKFWDTRSS 161 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECS--------SCEEEEEEEECSSCEEEEEEE-------TTSEEEEECSSCS
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeecccc--------CceEEEEEEeCCCCCEEEEcc-------CCCcEEEEECCCC
Confidence 44 4444445667999999998877654321 123345553322222333322 2456788888765
Q ss_pred ceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCcee--eEecCCCcCCcCCeeeeEEEEEC---
Q 016752 188 SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEF--QEVPLPHLEDKKNVLVMFVGNFS--- 262 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~--~~i~~P~~~~~~~~~~~~L~~~~--- 262 (383)
.-...- ..+. ....+...+.......... .+..+|+.+..- ..+..+... ... ...+....
T Consensus 162 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 227 (368)
T 3mmy_A 162 NPMMVL-QLPE----RCYCADVIYPMAVVATAER------GLIVYQLENQPSEFRRIESPLKH--QHR-CVAIFKDKQNK 227 (368)
T ss_dssp SCSEEE-ECSS----CEEEEEEETTEEEEEEGGG------CEEEEECSSSCEEEEECCCSCSS--CEE-EEEEEECTTSC
T ss_pred cEEEEE-ecCC----CceEEEecCCeeEEEeCCC------cEEEEEeccccchhhhccccccC--CCc-eEEEcccCCCC
Confidence 311110 0110 0011222222333333322 288888876543 333322221 111 11111111
Q ss_pred CeEEEEEecCCCCcEEEEEeC-C-ceeeeEEEcCC--------CC---ceeEEEEEEeCCCEEEEEeccCCCccccCCCc
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-G-CWTKAFSFHRS--------VG---DYVKALAYSKSEDKVLVDKFKYGEEDDDINRW 329 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~-~W~~~~~i~~~--------~~---~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~ 329 (383)
....++..... .+.||.++ . .-.....+... .. ....-+.++++|..++.. ..++
T Consensus 228 ~~~~~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~----------~~dg 295 (368)
T 3mmy_A 228 PTGFALGSIEG--RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV----------GSDG 295 (368)
T ss_dssp EEEEEEEETTS--EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE----------ETTS
T ss_pred CCeEEEecCCC--cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE----------ccCC
Confidence 11233333333 89999998 2 11222222220 00 135556777787766666 3677
Q ss_pred EEEEEeCCCCeEE
Q 016752 330 ELYWYDPQSQKAA 342 (383)
Q Consensus 330 ~~~~ydl~~~~~~ 342 (383)
.+..||+++++..
T Consensus 296 ~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 296 RFSFWDKDARTKL 308 (368)
T ss_dssp CEEEEETTTTEEE
T ss_pred eEEEEECCCCcEE
Confidence 8999999988765
No 90
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=74.91 E-value=38 Score=28.72 Aligned_cols=204 Identities=9% Similarity=0.033 Sum_probs=104.1
Q ss_pred eeeCcCe-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEE
Q 016752 104 IIDSCNG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVY 182 (383)
Q Consensus 104 ~~~s~~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vy 182 (383)
..+..+. |+........++++||.++ ...+.... ....++.+++... ++.... ....+.+|
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~--------~~~~~l~~~~dg~---l~v~~~------~~~~i~~~ 95 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPS--------HHQNGHCLNKQGH---LIACSH------GLRRLERQ 95 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSC--------SSEEEEEECTTCC---EEEEET------TTTEEEEE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCC--------CCcceeeECCCCc---EEEEec------CCCeEEEE
Confidence 3344444 5555555567999999998 55554321 1233567776432 333221 23567888
Q ss_pred EcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecC-----------CCCCCccEEEEEECCCceeeEecCCCcCC
Q 016752 183 SLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNN-----------PKDDIENLIVAFNLESEEFQEVPLPHLED 249 (383)
Q Consensus 183 ss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~-----------~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 249 (383)
+..++..+................+.+ +|.+|+..... ........|..+|.. .+...+.-...
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-- 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV-- 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS--
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC--
Confidence 888887765531111000001122333 68876643110 000012358899987 55554421111
Q ss_pred cCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC--Cce-eeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCcccc
Q 016752 250 KKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK--GCW-TKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 250 ~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~--~~W-~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~ 325 (383)
. ...++.. +|++. +..... ..+.+|.++ +.. .....+.. ......-+++.++|. |++.
T Consensus 173 ---~-~~gi~~s~dg~~l-v~~~~~-~~i~~~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~-l~v~---------- 234 (296)
T 3e5z_A 173 ---K-PNGLAFLPSGNLL-VSDTGD-NATHRYCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGL-IWAS---------- 234 (296)
T ss_dssp ---S-EEEEEECTTSCEE-EEETTT-TEEEEEEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSC-EEEE----------
T ss_pred ---C-CccEEECCCCCEE-EEeCCC-CeEEEEEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCC-EEEE----------
Confidence 0 1123333 56665 443332 267777775 555 33333321 111222355666664 7777
Q ss_pred CCCcEEEEEeCCCCeEEEEEEEe
Q 016752 326 INRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 326 ~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
. ...+..||++.+.+. .+...
T Consensus 235 ~-~~~v~~~~~~g~~~~-~~~~~ 255 (296)
T 3e5z_A 235 A-GDGVHVLTPDGDELG-RVLTP 255 (296)
T ss_dssp E-TTEEEEECTTSCEEE-EEECS
T ss_pred c-CCeEEEECCCCCEEE-EEECC
Confidence 3 668999999987777 66543
No 91
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=74.88 E-value=46 Score=29.62 Aligned_cols=101 Identities=9% Similarity=0.151 Sum_probs=56.1
Q ss_pred EEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEE--ECCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEE
Q 016752 228 LIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGN--FSGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 228 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~ 304 (383)
.|..+|+.++.... +........... -..+.. .++.+.+...... .+.||-++..-.....+.- -...+.-+.
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~sgs~D~--~v~~wd~~~~~~~~~~~~~-h~~~v~~v~ 256 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTAD-VLSLSINSLNANMFISGSCDT--TVRLWDLRITSRAVRTYHG-HEGDINSVK 256 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSC-EEEEEECSSSCCEEEEEETTS--CEEEEETTTTCCCCEEECC-CSSCCCEEE
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccC-eEEEEeecCCCCEEEEEECCC--eEEEEECCCCCcceEEECC-cCCCeEEEE
Confidence 38889998765433 221111111111 112332 2667777766555 8999998721122223321 012344567
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.++|..++-. ..++.+..||+++++..
T Consensus 257 ~~p~~~~l~s~----------s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 257 FFPDGQRFGTG----------SDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp ECTTSSEEEEE----------CSSSCEEEEETTTTEEE
T ss_pred EecCCCeEEEE----------cCCCeEEEEECCCCcEE
Confidence 77787766555 46778999999887655
No 92
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=74.27 E-value=52 Score=29.96 Aligned_cols=197 Identities=12% Similarity=0.045 Sum_probs=97.8
Q ss_pred cCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 108 CNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 108 ~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
.+|-|.+.. ....+.+++|.+++...+...... .. +.+++..+ .++... ......+.+++..+
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~------~~---ia~~~~g~--~l~~~d-----~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG------GK---PAVTKDKQ--RVYSIG-----WEGTHTVYVYMKAS 203 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCCB------CB---CEECTTSS--EEEEEB-----SSTTCEEEEEEGGG
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC------Cc---eeEecCCC--cEEEEe-----cCCCceEEEEEcCC
Confidence 456555554 456899999999887766443111 11 45565433 222221 11112566666654
Q ss_pred Cc-eEEeccCCCe-eeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeee-e-EEE
Q 016752 187 NS-WRRIRVDFPY-YILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLV-M-FVG 259 (383)
Q Consensus 187 ~~-Wr~~~~~~p~-~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~-~-~L~ 259 (383)
+. .+... ..+. .. ....++.+ +|.||+ +... ..|..+|+.+.....+........... . . .++
T Consensus 204 ~~~~~~~g-~~~~~~~-~~p~~iav~p~~g~lyv-~d~~------~~I~~~d~~~~~~~~~~~~~~~g~~~~-~P~~~ia 273 (409)
T 3hrp_A 204 GWAPTRIG-QLGSTFS-GKIGAVALDETEEWLYF-VDSN------KNFGRFNVKTQEVTLIKQLELSGSLGT-NPGPYLI 273 (409)
T ss_dssp TTCEEEEE-ECCTTSC-SCCCBCEECTTSSEEEE-ECTT------CEEEEEETTTCCEEEEEECCCCSCCCC-SSCCEEE
T ss_pred CceeEEee-eccchhc-CCcEEEEEeCCCCeEEE-EECC------CcEEEEECCCCCEEEEecccccCCCCC-CccccEE
Confidence 32 23331 1111 11 11123333 689999 3222 249999998876655511110001111 1 1 355
Q ss_pred EE--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCC----CC-------ceeEEE--EEEeCCCEEEEEeccCCCccc
Q 016752 260 NF--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRS----VG-------DYVKAL--AYSKSEDKVLVDKFKYGEEDD 324 (383)
Q Consensus 260 ~~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~----~~-------~~~~~~--~~~~~g~~v~l~~~~~~~~~~ 324 (383)
.. +|.|++...... .+..|..++.-.. ..... .. ....|. ++.++|. ||+..
T Consensus 274 ~~p~~g~lyv~d~~~~--~I~~~~~~g~~~~--~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad-------- 340 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLS--SVYKITPDGECEW--FCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD-------- 340 (409)
T ss_dssp EETTTTEEEEEETTTT--EEEEECTTCCEEE--EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE--------
T ss_pred EeCCCCEEEEEeCCCC--EEEEEecCCCEEE--EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe--------
Confidence 54 578887765433 4444433343111 11110 00 122354 4456666 78874
Q ss_pred cC-CCcEEEEEeCCCCeEEEEE
Q 016752 325 DI-NRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 325 ~~-~~~~~~~ydl~~~~~~~~v 345 (383)
. ....+..+|+.++++. .+
T Consensus 341 -~~~~~~I~~~~~~~G~v~-~~ 360 (409)
T 3hrp_A 341 -GFKGYCLRKLDILDGYVS-TV 360 (409)
T ss_dssp -TTTTCEEEEEETTTTEEE-EE
T ss_pred -CCCCCEEEEEECCCCEEE-EE
Confidence 4 5678999998888877 44
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=73.94 E-value=50 Score=29.64 Aligned_cols=202 Identities=14% Similarity=0.117 Sum_probs=100.6
Q ss_pred CcCeeEEEec-CCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+.+|-+++.. ....+.++|+.+++.. .++.. ......+.+++..+ +- +.... ....+.+|+.
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~l-~~~~~------~~~~i~~~d~ 241 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLT--------GKWSKILLYDPIRD-LV-YCSNW------ISEDISVIDR 241 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS--------SSSEEEEEEETTTT-EE-EEEET------TTTEEEEEET
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCC--------CCCeeEEEEcCCCC-EE-EEEec------CCCcEEEEEC
Confidence 3455444443 4467899999886654 33311 11233466676433 32 22221 2346888998
Q ss_pred CCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCC-CC-CccEEEEEECCCceeeEe-cCCCcCCcCCeeeeEEE
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPK-DD-IENLIVAFNLESEEFQEV-PLPHLEDKKNVLVMFVG 259 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~-~~-~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~ 259 (383)
.++.....- ..... ...+.+ +|...+.+....+ .. ....|..+|+.+.+.... ..+. . ...+.
T Consensus 242 ~~~~~~~~~-~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-----~--~~~~~ 309 (433)
T 3bws_A 242 KTKLEIRKT-DKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG-----N--KRHIV 309 (433)
T ss_dssp TTTEEEEEC-CCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-----C--EEEEE
T ss_pred CCCcEEEEe-cCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC-----C--cceEE
Confidence 877543221 11111 012222 5644444442110 00 123588999987755432 1111 1 11223
Q ss_pred EE-CC-eEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCC--cc---ccCCCcEE
Q 016752 260 NF-SG-CLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGE--ED---DDINRWEL 331 (383)
Q Consensus 260 ~~-~G-~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~--~~---~~~~~~~~ 331 (383)
.. +| .|++...... .+.+|.++ ++ ....++. .....-++++++|+.+++.....+. .. ....++.+
T Consensus 310 ~~~~g~~l~~~~~~~~--~v~v~d~~~~~--~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v 383 (433)
T 3bws_A 310 SGNTENKIYVSDMCCS--KIEVYDLKEKK--VQKSIPV--FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKV 383 (433)
T ss_dssp ECSSTTEEEEEETTTT--EEEEEETTTTE--EEEEEEC--SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEE
T ss_pred ECCCCCEEEEEecCCC--EEEEEECCCCc--EEEEecC--CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEE
Confidence 22 45 4555544433 89999887 33 3334443 2234567777888888877310000 00 00013589
Q ss_pred EEEeCCCCeEE
Q 016752 332 YWYDPQSQKAA 342 (383)
Q Consensus 332 ~~ydl~~~~~~ 342 (383)
+.||+++++..
T Consensus 384 ~~~d~~~~~~~ 394 (433)
T 3bws_A 384 YVIDTTTDTVK 394 (433)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCcEE
Confidence 99999998877
No 94
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=73.68 E-value=46 Score=29.12 Aligned_cols=112 Identities=10% Similarity=0.098 Sum_probs=56.2
Q ss_pred Cce-EEEEEecCCCCCCccEEEEEE--CCCceeeEec-CCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC--
Q 016752 210 DGH-VHWLVTNNPKDDIENLIVAFN--LESEEFQEVP-LPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-- 283 (383)
Q Consensus 210 ~G~-lywl~~~~~~~~~~~~il~fD--~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-- 283 (383)
+|. +|....... ....|.+|+ ..+.....+. .+.... . ...+.. +|+..++..... ..+.+|.++
T Consensus 60 dg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~~~~-~---p~~~~~-dg~~l~~~~~~~-~~v~~~~~~~~ 130 (361)
T 3scy_A 60 DGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKTMGA-D---PCYLTT-NGKNIVTANYSG-GSITVFPIGQD 130 (361)
T ss_dssp TSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEECSSS-C---EEEEEE-CSSEEEEEETTT-TEEEEEEBCTT
T ss_pred CCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEeccCCC-C---cEEEEE-CCCEEEEEECCC-CEEEEEEeCCC
Confidence 464 666554311 112355554 4446666553 222211 1 223444 776544444333 389999997
Q ss_pred Cceeee-EEEcC-C---C-----CceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 284 GCWTKA-FSFHR-S---V-----GDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 284 ~~W~~~-~~i~~-~---~-----~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
+.-... ..+.. . . .....-+.++++|+.+++.. .....+..|++...
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~---------~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD---------LGTDQIHKFNINPN 187 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE---------TTTTEEEEEEECTT
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe---------CCCCEEEEEEEcCC
Confidence 322211 11111 0 0 12345577888888888873 34567778866543
No 95
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.05 E-value=24 Score=32.28 Aligned_cols=108 Identities=9% Similarity=0.120 Sum_probs=60.6
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCCCcEEEEEeC--Cc
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLK--GC 285 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~l~iW~l~--~~ 285 (383)
+|.|||...... .|..+|+.+.....+...... . . ++.. +|. |+.... .. .-.||.++ +.
T Consensus 141 ~g~lyv~d~~~~------~I~~id~~~g~~~~~~~~~~~---~--~--ia~~~~g~~l~~~d~-~~--~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRDDP------RVRLISVDDNKVTTVHPGFKG---G--K--PAVTKDKQRVYSIGW-EG--THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETTTT------EEEEEETTTTEEEEEEETCCB---C--B--CEECTTSSEEEEEBS-ST--TCEEEEEEGGGT
T ss_pred CCCEEEEecCCC------cEEEEECCCCEEEEeeccCCC---C--c--eeEecCCCcEEEEec-CC--CceEEEEEcCCC
Confidence 789999875432 499999998877765432111 1 1 2322 344 444433 22 12677776 55
Q ss_pred eeeeEEE---cCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 286 WTKAFSF---HRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 286 W~~~~~i---~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
|.. ..+ .........-+++.++++.||+. .....++.||++++... .+
T Consensus 205 ~~~-~~~g~~~~~~~~~p~~iav~p~~g~lyv~----------d~~~~I~~~d~~~~~~~-~~ 255 (409)
T 3hrp_A 205 WAP-TRIGQLGSTFSGKIGAVALDETEEWLYFV----------DSNKNFGRFNVKTQEVT-LI 255 (409)
T ss_dssp TCE-EEEEECCTTSCSCCCBCEECTTSSEEEEE----------CTTCEEEEEETTTCCEE-EE
T ss_pred cee-EEeeeccchhcCCcEEEEEeCCCCeEEEE----------ECCCcEEEEECCCCCEE-EE
Confidence 542 222 11011223345666645677886 34568999999888766 44
No 96
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=72.55 E-value=40 Score=27.90 Aligned_cols=189 Identities=14% Similarity=0.011 Sum_probs=89.6
Q ss_pred CcCeeEEE-e-cCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 107 SCNGLIAL-K-NDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 107 s~~GLll~-~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+.+|-|.+ . .....++++|+-++....++..... ...++.+|+.. . +.... ....+.+|+.
T Consensus 32 ~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~p~~i~~~~~g-~--l~v~~-------~~~~i~~~d~ 94 (270)
T 1rwi_B 32 DSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY-------QPQGLAVDGAG-T--VYVTD-------FNNRVVTLAA 94 (270)
T ss_dssp CTTCCEEEEECSSSCEEEEECC-----EECCCCSCC-------SCCCEEECTTC-C--EEEEE-------TTTEEEEECT
T ss_pred CCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC-------CcceeEECCCC-C--EEEEc-------CCCEEEEEeC
Confidence 34555555 4 3445788899988776655532211 12246666532 2 32222 1235677777
Q ss_pred CCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 261 (383)
.++.-+... .... ....++.+ +|.+|+...... .|..+|..+......... ... ... .++..
T Consensus 95 ~~~~~~~~~-~~~~---~~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~-~~~-~p~---~i~~~~ 159 (270)
T 1rwi_B 95 GSNNQTVLP-FDGL---NYPEGLAVDTQGAVYVADRGNN------RVVKLAAGSKTQTVLPFT-GLN-DPD---GVAVDN 159 (270)
T ss_dssp TCSCCEECC-CCSC---SSEEEEEECTTCCEEEEEGGGT------EEEEECTTCCSCEECCCC-SCC-SCC---CEEECT
T ss_pred CCceEeeee-cCCc---CCCcceEECCCCCEEEEECCCC------EEEEEECCCceeEeeccc-cCC-Cce---eEEEeC
Confidence 665443332 1000 00123333 678777654322 488888766544332211 111 111 23443
Q ss_pred CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcC-CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHR-SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~-~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|+|++...... .+.+|..++.-.. .... .+ ....-+++.++| .+++.. .....+..||+.++.
T Consensus 160 ~g~l~v~~~~~~--~i~~~~~~~~~~~--~~~~~~~-~~p~~i~~d~~g-~l~v~~---------~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 160 SGNVYVTDTDNN--RVVKLEAESNNQV--VLPFTDI-TAPWGIAVDEAG-TVYVTE---------HNTNQVVKLLAGSTT 224 (270)
T ss_dssp TCCEEEEEGGGT--EEEEECTTTCCEE--ECCCSSC-CSEEEEEECTTC-CEEEEE---------TTTSCEEEECTTCSC
T ss_pred CCCEEEEECCCC--EEEEEecCCCceE--eecccCC-CCceEEEECCCC-CEEEEE---------CCCCcEEEEcCCCCc
Confidence 578777665433 5655555421111 1111 11 223334455555 677773 346689999998877
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 225 ~~ 226 (270)
T 1rwi_B 225 ST 226 (270)
T ss_dssp CE
T ss_pred ce
Confidence 66
No 97
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.37 E-value=46 Score=28.16 Aligned_cols=195 Identities=9% Similarity=-0.049 Sum_probs=95.1
Q ss_pred eCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeec-----------C
Q 016752 106 DSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRE-----------N 173 (383)
Q Consensus 106 ~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~-----------~ 173 (383)
-+.+|.+.+.. ....++++||.|++...+........ ......+.+|+.. . +......... .
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~---~~~~~~i~~d~~G-~--l~vtd~~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKK---LNSPNDVCLAPDG-S--LWFSDPTYGIDKPEEGYGGEME 149 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEE---CCCCCCEEECTTS-C--EEEEECSHHHHCGGGSSCCCCC
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCC---CCCCCCEEECCCC-C--EEEECCcccccccccccccccc
Confidence 34466555554 34679999999998876643211100 1112235566533 2 2221100000 0
Q ss_pred CcccEEEEEEcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECC-Ccee-e--EecCCCc
Q 016752 174 VEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLE-SEEF-Q--EVPLPHL 247 (383)
Q Consensus 174 ~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~-~e~~-~--~i~~P~~ 247 (383)
.....+..|+.. +.-+....... ...++.+ +|.++ ++.... ..|..||+. +.++ . .+- ...
T Consensus 150 ~~~~~l~~~~~~-g~~~~~~~~~~-----~~~gi~~s~dg~~l-v~~~~~-----~~i~~~~~~~~g~~~~~~~~~-~~~ 216 (296)
T 3e5z_A 150 LPGRWVFRLAPD-GTLSAPIRDRV-----KPNGLAFLPSGNLL-VSDTGD-----NATHRYCLNARGETEYQGVHF-TVE 216 (296)
T ss_dssp SSSCEEEEECTT-SCEEEEECCCS-----SEEEEEECTTSCEE-EEETTT-----TEEEEEEECSSSCEEEEEEEE-CCS
T ss_pred CCCcEEEEECCC-CCEEEeecCCC-----CCccEEECCCCCEE-EEeCCC-----CeEEEEEECCCCcCcCCCeEe-eCC
Confidence 011244444444 44333321110 0123333 57766 443322 258899986 4554 1 111 111
Q ss_pred CCcCCeeeeEEEE-ECCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEE-EeCCCEEEEEeccCCCcccc
Q 016752 248 EDKKNVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAY-SKSEDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 248 ~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~-~~~g~~v~l~~~~~~~~~~~ 325 (383)
. ... ..+.+ .+|.|++.. .. .+.+|..++.-......+. . ..-+++ .++++.|++.
T Consensus 217 ~-~~p---~~i~~d~~G~l~v~~--~~--~v~~~~~~g~~~~~~~~~~---~-~~~~~f~~~d~~~L~v~---------- 274 (296)
T 3e5z_A 217 P-GKT---DGLRVDAGGLIWASA--GD--GVHVLTPDGDELGRVLTPQ---T-TSNLCFGGPEGRTLYMT---------- 274 (296)
T ss_dssp S-SCC---CSEEEBTTSCEEEEE--TT--EEEEECTTSCEEEEEECSS---C-CCEEEEESTTSCEEEEE----------
T ss_pred C-CCC---CeEEECCCCCEEEEc--CC--eEEEECCCCCEEEEEECCC---C-ceeEEEECCCCCEEEEE----------
Confidence 1 011 12344 368887776 22 5666655544333332221 1 233445 3577788888
Q ss_pred CCCcEEEEEeCCCCeEE
Q 016752 326 INRWELYWYDPQSQKAA 342 (383)
Q Consensus 326 ~~~~~~~~ydl~~~~~~ 342 (383)
....++.+++++++++
T Consensus 275 -t~~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 275 -VSTEFWSIETNVRGLE 290 (296)
T ss_dssp -ETTEEEEEECSCCBCC
T ss_pred -cCCeEEEEEccccccc
Confidence 4568999999999998
No 98
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=71.10 E-value=52 Score=28.61 Aligned_cols=217 Identities=11% Similarity=0.048 Sum_probs=108.5
Q ss_pred eeCcCeeEEEec-CCCcEEEEcCCc----cc-eeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccE
Q 016752 105 IDSCNGLIALKN-DENGIAFWNPST----KE-HLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTE 178 (383)
Q Consensus 105 ~~s~~GLll~~~-~~~~~~V~NP~T----~~-~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~ 178 (383)
++..+|.|...+ ....++..++.+ .. ...++.. . ....++++|+..+ +++.... ....
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-~-------~~p~glavd~~~~--~ly~~d~------~~~~ 100 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-I-------QAPDGLAVDWIHS--NIYWTDS------VLGT 100 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-C-------SCCCEEEEETTTT--EEEEEET------TTTE
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-C-------CCcCEEEEeecCC--eEEEEEC------CCCE
Confidence 444566666555 345788888876 22 2223211 1 1123577776544 3333321 2456
Q ss_pred EEEEEcCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeee
Q 016752 179 VSVYSLRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLV 255 (383)
Q Consensus 179 ~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 255 (383)
+++++.....=+.+. ... . ....++.+ +|.+||..... ...|..+|+....-..+-.. .. .. .
T Consensus 101 I~~~~~~g~~~~~~~-~~~--~-~~P~~iavdp~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~-~~---~~-P 166 (316)
T 1ijq_A 101 VSVADTKGVKRKTLF-REN--G-SKPRAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTE-NI---QW-P 166 (316)
T ss_dssp EEEEETTSSSEEEEE-ECT--T-CCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECS-SC---SC-E
T ss_pred EEEEeCCCCceEEEE-ECC--C-CCcceEEeCCCCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEEC-CC---CC-c
Confidence 677777654322221 100 0 01133443 68999986432 13599999876554433211 11 11 1
Q ss_pred eEEEEE--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEE
Q 016752 256 MFVGNF--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYW 333 (383)
Q Consensus 256 ~~L~~~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ 333 (383)
..|+.. +++|+++..... .+...-++++-.+.. +.. -.....|.++.-+++.||+.. .....+..
T Consensus 167 ~gla~d~~~~~lY~~D~~~~--~I~~~d~dg~~~~~~-~~~-~~~~~~P~giav~~~~ly~~d---------~~~~~V~~ 233 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLH--SISSIDVNGGNRKTI-LED-EKRLAHPFSLAVFEDKVFWTD---------IINEAIFS 233 (316)
T ss_dssp EEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEE-EEC-TTTTSSEEEEEEETTEEEEEE---------TTTTEEEE
T ss_pred eEEEEeccCCEEEEEECCCC--eEEEEecCCCceEEE-eec-CCccCCcEEEEEECCEEEEEE---------CCCCeEEE
Confidence 234554 678888775433 454444444322221 111 011234666655567888884 46779999
Q ss_pred EeCCCCeEEEEEEEeccCCCeeeEEEEEccccc
Q 016752 334 YDPQSQKAADQVTIHGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 334 ydl~~~~~~~~v~~~~~~~~~~~~~~y~~sl~~ 366 (383)
+|..+++....+ ..+...- +.+.+|.++..+
T Consensus 234 ~~~~~g~~~~~i-~~~~~~p-~~i~v~~~~~qp 264 (316)
T 1ijq_A 234 ANRLTGSDVNLL-AENLLSP-EDMVLFHNLTQP 264 (316)
T ss_dssp EETTTCCCCEEE-ECSCSCC-CCEEEESGGGSC
T ss_pred EeCCCCcceEEE-ecCCCCc-eEEEEeccccCC
Confidence 999766544143 2333333 467777766543
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=69.97 E-value=51 Score=28.05 Aligned_cols=187 Identities=10% Similarity=0.109 Sum_probs=97.0
Q ss_pred Ce-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+| +|+....+..+.++|..+++.......... ......+.+.+. +.+- +... ....+.+|+..++
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~i~~~~~~~~-~~~l-~~~~-------~dg~v~~~d~~~~ 173 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS-----APACYALAISPD-SKVC-FSCC-------SDGNIAVWDLHNQ 173 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECS-----SSCEEEEEECTT-SSEE-EEEE-------TTSCEEEEETTTT
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccC-----CCceEEEEECCC-CCEE-EEEe-------CCCcEEEEeCCCC
Confidence 44 444444556799999988764322221111 112334666653 2232 2222 2345788888876
Q ss_pred ceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CC
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
.-...-...... -..+.+ +|.....+..+. .|..+|+.+.+-.. +..+.. ...+... +|
T Consensus 174 ~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~-------v~~~~~s~~~ 236 (337)
T 1gxr_A 174 TLVRQFQGHTDG----ASCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQHDFTSQ-------IFSLGYCPTG 236 (337)
T ss_dssp EEEEEECCCSSC----EEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEEECSSC-------EEEEEECTTS
T ss_pred ceeeeeecccCc----eEEEEECCCCCEEEEEecCC------cEEEEECCCCceEeeecCCCc-------eEEEEECCCC
Confidence 432211010000 012222 555444444332 48899998765432 332211 1123332 56
Q ss_pred eEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 264 CLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+.++..... .+.+|.++ .. ...+.. -.....-+.+.++|+.++.. ..++.+..||+++++..
T Consensus 237 ~~l~~~~~~~--~i~~~~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~----------~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 237 EWLAVGMESS--NVEVLHVNKPD---KYQLHL-HESCVLSLKFAYCGKWFVST----------GKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SEEEEEETTS--CEEEEETTSSC---EEEECC-CSSCEEEEEECTTSSEEEEE----------ETTSEEEEEETTTCCEE
T ss_pred CEEEEEcCCC--cEEEEECCCCC---eEEEcC-CccceeEEEECCCCCEEEEe----------cCCCcEEEEECCCCeEE
Confidence 6666655444 79999988 32 112221 11345566777788877666 36788999999998866
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.59 E-value=1.2e+02 Score=32.02 Aligned_cols=190 Identities=15% Similarity=0.168 Sum_probs=96.4
Q ss_pred CcCe-eEEEecCCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 107 SCNG-LIALKNDENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 107 s~~G-Lll~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+.+| +|.....+..+.|||..|++.. .+... ......+.+.|.. .+-+.+ . ....+.|++.
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--------~~~v~~~~~s~~~-~~l~s~-~-------~d~~v~vwd~ 686 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--------EDEVLCCAFSSDD-SYIATC-S-------ADKKVKIWDS 686 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--------SSCEEEEEECTTS-SEEEEE-E-------TTSEEEEEET
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--------CCCEEEEEEecCC-CEEEEE-e-------CCCeEEEEEC
Confidence 3345 4444445668999999998764 33311 1234456666643 333222 2 2356889998
Q ss_pred CCCceEEeccCCCeeeecCCcceee----CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEE
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA----DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVG 259 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~ 259 (383)
.++.-...-....... ..+.+ ++.+...+..+. .|..+|+.+..... +..... .. ..+.
T Consensus 687 ~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~l~sg~~d~------~v~vwd~~~~~~~~~~~~h~~----~v--~~~~ 750 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQV----NCCHFTNKSNHLLLATGSNDF------FLKLWDLNQKECRNTMFGHTN----SV--NHCR 750 (1249)
T ss_dssp TTCCEEEEEECCSSCE----EEEEECSSSSCCEEEEEETTS------CEEEEETTSSSEEEEECCCSS----CE--EEEE
T ss_pred CCCceEEEEcCCCCcE----EEEEEecCCCceEEEEEeCCC------eEEEEECCCcchhheecCCCC----CE--EEEE
Confidence 8874322110100000 11222 222222222221 38889998776443 221111 11 1223
Q ss_pred EE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC----------CCceeEEEEEEeCCCEEEEEeccCCCccccCC
Q 016752 260 NF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS----------VGDYVKALAYSKSEDKVLVDKFKYGEEDDDIN 327 (383)
Q Consensus 260 ~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~----------~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~ 327 (383)
.. +|.+.+...... .+.+|.++ +.-......... .......+.+.++|+.++.. .
T Consensus 751 ~sp~~~~l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~-----------~ 817 (1249)
T 3sfz_A 751 FSPDDELLASCSADG--TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA-----------A 817 (1249)
T ss_dssp ECSSTTEEEEEESSS--EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE-----------E
T ss_pred EecCCCEEEEEECCC--eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE-----------c
Confidence 22 566665555444 89999987 432222222110 00123344556788877776 4
Q ss_pred CcEEEEEeCCCCeEE
Q 016752 328 RWELYWYDPQSQKAA 342 (383)
Q Consensus 328 ~~~~~~ydl~~~~~~ 342 (383)
++.+..||+.++...
T Consensus 818 ~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 818 KNKVLLFDIHTSGLL 832 (1249)
T ss_dssp TTEEEEEETTTCCEE
T ss_pred CCcEEEEEecCCCce
Confidence 668999999888876
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=69.50 E-value=67 Score=29.24 Aligned_cols=69 Identities=9% Similarity=0.079 Sum_probs=44.0
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
|++.+...... .+.||-++ +.-........ .....-++++ +|+.++.. ..++.+..||+++++.
T Consensus 210 ~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~s-d~~~l~s~----------~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRDE--HIKISHYPQCFIVDKWLFGH--KHFVSSICCG-KDYLLLSA----------GGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETTS--CEEEEEESCTTCEEEECCCC--SSCEEEEEEC-STTEEEEE----------ESSSEEEEEETTTCCE
T ss_pred CcEEEEEcCCC--cEEEEECCCCceeeeeecCC--CCceEEEEEC-CCCEEEEE----------eCCCeEEEEECCCCcE
Confidence 66666665544 89999998 43322211121 1335566777 88877766 3678999999999886
Q ss_pred EEEEE
Q 016752 342 ADQVT 346 (383)
Q Consensus 342 ~~~v~ 346 (383)
...+.
T Consensus 275 ~~~~~ 279 (450)
T 2vdu_B 275 LSTFD 279 (450)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 53443
No 102
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=69.18 E-value=88 Score=30.48 Aligned_cols=213 Identities=12% Similarity=0.047 Sum_probs=111.6
Q ss_pred eeCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 105 IDSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 105 ~~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
++..+|.|...+ ....++.+++.......+-.... ..-.++++|..++ +++.... ....+++++
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~-------~~P~GlAvD~~~~--~LY~tD~------~~~~I~v~~ 108 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL-------DYPEGMAVDWLGK--NLYWADT------GTNRIEVSK 108 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-------SCCCEEEEETTTT--EEEEEET------TTTEEEEEE
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC-------CCcceEEEEeCCC--EEEEEEC------CCCEEEEEe
Confidence 344567666655 34567777776544333322211 1233678886655 3444331 245778888
Q ss_pred cCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE
Q 016752 184 LRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN 260 (383)
Q Consensus 184 s~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~ 260 (383)
.....=+.+. .- .+ ....++.+ +|.|||..... ...|..+|+.......+- . ... . ..-|+.
T Consensus 109 ~dG~~~~~l~-~~--~l-~~P~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG~~~~~l~-~-~~~-~---P~Glal 173 (628)
T 4a0p_A 109 LDGQHRQVLV-WK--DL-DSPRALALDPAEGFMYWTEWGG-----KPKIDRAAMDGSERTTLV-P-NVG-R---ANGLTI 173 (628)
T ss_dssp TTSTTCEEEE-CS--SC-CCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEE-C-SCS-S---EEEEEE
T ss_pred cCCCcEEEEE-eC--CC-CCcccEEEccCCCeEEEeCCCC-----CCEEEEEeCCCCceEEEE-C-CCC-C---cceEEE
Confidence 7654322221 10 00 11134444 68999986431 235999999766544432 1 111 1 113444
Q ss_pred E--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 261 F--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 261 ~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
. +++|+++..... .+...-+++.-.++ +.- ....|.++.-+++.||+.+ .....+..+|..+
T Consensus 174 D~~~~~LY~aD~~~~--~I~~~d~dG~~~~v--~~~---~l~~P~glav~~~~ly~tD---------~~~~~I~~~dk~t 237 (628)
T 4a0p_A 174 DYAKRRLYWTDLDTN--LIESSNMLGLNREV--IAD---DLPHPFGLTQYQDYIYWTD---------WSRRSIERANKTS 237 (628)
T ss_dssp ETTTTEEEEEETTTT--EEEEEETTSCSCEE--EEE---CCSCEEEEEEETTEEEEEE---------TTTTEEEEEETTT
T ss_pred ccccCEEEEEECCCC--EEEEEcCCCCceEE--eec---cCCCceEEEEECCEEEEec---------CCCCEEEEEECCC
Confidence 3 688988876433 44443344433322 211 1235667766667899884 4577899999877
Q ss_pred CeEEEEEEEeccCCCeeeEEEEEcccc
Q 016752 339 QKAADQVTIHGVPQGCRDTLVCVDSLV 365 (383)
Q Consensus 339 ~~~~~~v~~~~~~~~~~~~~~y~~sl~ 365 (383)
++-. .+-..+...- ..+.+|.++..
T Consensus 238 g~~~-~~l~~~~~~p-~~i~v~~~~~q 262 (628)
T 4a0p_A 238 GQNR-TIIQGHLDYV-MDILVFHSSRQ 262 (628)
T ss_dssp CCSC-EEEECSCCSC-CEEEEECGGGS
T ss_pred CCce-EEEecCCCCc-ceeeeeeeccc
Confidence 7644 3212232222 45667766543
No 103
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=68.55 E-value=49 Score=27.32 Aligned_cols=188 Identities=14% Similarity=0.088 Sum_probs=95.9
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+|-|.+......++++||.++....++.... ....++.+|+.. +++.... ....+.+|+.++.
T Consensus 76 ~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~-------~~p~~i~~~~~g---~l~v~~~------~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 76 GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL-------NYPEGLAVDTQG---AVYVADR------GNNRVVKLAAGSK 139 (270)
T ss_dssp TTCCEEEEETTTEEEEECTTCSCCEECCCCSC-------SSEEEEEECTTC---CEEEEEG------GGTEEEEECTTCC
T ss_pred CCCCEEEEcCCCEEEEEeCCCceEeeeecCCc-------CCCcceEECCCC---CEEEEEC------CCCEEEEEECCCc
Confidence 35555555445679999998887666553221 123356777633 2333221 2345666665554
Q ss_pred ceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC 264 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~ 264 (383)
...... .. . .....++.+ +|.+|+...... .|..||..+........... .. ...++.. +|.
T Consensus 140 ~~~~~~-~~--~-~~~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~~~--~~---p~~i~~d~~g~ 204 (270)
T 1rwi_B 140 TQTVLP-FT--G-LNDPDGVAVDNSGNVYVTDTDNN------RVVKLEAESNNQVVLPFTDI--TA---PWGIAVDEAGT 204 (270)
T ss_dssp SCEECC-CC--S-CCSCCCEEECTTCCEEEEEGGGT------EEEEECTTTCCEEECCCSSC--CS---EEEEEECTTCC
T ss_pred eeEeec-cc--c-CCCceeEEEeCCCCEEEEECCCC------EEEEEecCCCceEeecccCC--CC---ceEEEECCCCC
Confidence 433221 10 0 011133443 588777654332 49999998776544322211 11 1234443 577
Q ss_pred EEEEEecCCCCcEEEEEeCCceeeeEEEcC-CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 265 LYFSCLCNYPQPVDIWVLKGCWTKAFSFHR-SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 265 L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~-~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
|++...... .+.+|..++.-. ..+.. .+ ....-+++.++|. |++.. ..+..+..|++..++.
T Consensus 205 l~v~~~~~~--~v~~~~~~~~~~--~~~~~~~~-~~p~~i~~~~~g~-l~v~~---------~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 205 VYVTEHNTN--QVVKLLAGSTTS--TVLPFTGL-NTPLAVAVDSDRT-VYVAD---------RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEEETTTS--CEEEECTTCSCC--EECCCCSC-SCEEEEEECTTCC-EEEEE---------GGGTEEEEECCCGGGS
T ss_pred EEEEECCCC--cEEEEcCCCCcc--eeeccCCC-CCceeEEECCCCC-EEEEE---------CCCCEEEEEcCCCccc
Confidence 777765433 566665552211 11211 01 2233455556665 77774 3567899998876654
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=68.47 E-value=62 Score=28.44 Aligned_cols=54 Identities=6% Similarity=0.108 Sum_probs=33.4
Q ss_pred cEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 276 PVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 276 ~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+.+|-+. +. ....+.. -.....-+.++++|..|+.. ..++.+..||+++.+..
T Consensus 315 ~i~v~d~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~s~----------~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 315 TIAVYTVYSGE--QITMLKG-HYKTVDCCVFQSNFQELYSG----------SRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEEEEETTTCC--EEEEECC-CSSCEEEEEEETTTTEEEEE----------ETTSCEEEEEECC----
T ss_pred EEEEEECcCCc--ceeeecc-CCCeEEEEEEcCCCCEEEEE----------CCCCeEEEEeCCCCCcc
Confidence 78888887 32 3333332 11335567778888877666 36778999999988755
No 105
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=67.41 E-value=95 Score=30.19 Aligned_cols=157 Identities=8% Similarity=0.011 Sum_probs=76.2
Q ss_pred ccEEEEEEcCCCceEEeccCCCeeeecCCcceee--Cce-EEEEEecCCCCCCccEEEEEECCCc-eeeEecCCCcCCcC
Q 016752 176 YTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESE-EFQEVPLPHLEDKK 251 (383)
Q Consensus 176 ~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e-~~~~i~~P~~~~~~ 251 (383)
...+.+++..++.-+.+........ .-..+.+ ||. ++....+.. .....|..+|+.+. ....+.........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~--~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK--FLTNLSWSPDENILYVAEVNRA--QNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC--EEEEEEECTTSSEEEEEEECTT--SCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCCce--eEeeEEEECCCCEEEEEEeCCC--CCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 4567888888776544431100000 0011222 665 555443331 12335889999887 66554311111000
Q ss_pred CeeeeEEEEE---CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCC
Q 016752 252 NVLVMFVGNF---SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINR 328 (383)
Q Consensus 252 ~~~~~~L~~~---~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~ 328 (383)
.. ...+... +|++.++..... ...||.++..-.+...+...-......++++++|+.|++..... ....
T Consensus 310 ~~-~~~~~~sp~~dg~~l~~~~~~g--~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~-----~~~~ 381 (706)
T 2z3z_A 310 EP-LHPLTFLPGSNNQFIWQSRRDG--WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA-----SPLE 381 (706)
T ss_dssp CC-CSCCEECTTCSSEEEEEECTTS--SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS-----CTTC
T ss_pred Cc-cCCceeecCCCCEEEEEEccCC--ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC-----CCce
Confidence 00 0012222 677555444333 68899987111222333221112233467788888887763100 0012
Q ss_pred cEEEEEeCCCCeEEEEE
Q 016752 329 WELYWYDPQSQKAADQV 345 (383)
Q Consensus 329 ~~~~~ydl~~~~~~~~v 345 (383)
..++.+|+++++.+ .+
T Consensus 382 ~~l~~~d~~~~~~~-~l 397 (706)
T 2z3z_A 382 RHFYCIDIKGGKTK-DL 397 (706)
T ss_dssp BEEEEEETTCCCCE-ES
T ss_pred EEEEEEEcCCCCce-ec
Confidence 47899999888766 54
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=67.24 E-value=1e+02 Score=30.54 Aligned_cols=96 Identities=20% Similarity=0.236 Sum_probs=60.2
Q ss_pred EEEEEECCCceeeEec-CCCcCCcCCeeeeEEEEE-C--CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEE
Q 016752 228 LIVAFNLESEEFQEVP-LPHLEDKKNVLVMFVGNF-S--GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKA 302 (383)
Q Consensus 228 ~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~ 302 (383)
.|..+|+.+++...+. +..+. .. -..+... + |.+.+...... .+.+|-++ +.|.....+.. -.....-
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~--~~--V~~l~~s~~~~~~~l~s~s~Dg--~I~vwd~~~~~~~~~~~~~~-h~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHE--GP--VWRVDWAHPKFGTILASCSYDG--KVLIWKEENGRWSQIAVHAV-HSASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCS--SC--EEEEEECCTTSCSEEEEEETTS--CEEEEEEETTEEEEEEEECC-CSSCEEE
T ss_pred cEEEEecCCCCCccceeccCCc--Cc--eEEEEecCCCCCCEEEEEeCCC--eEEEEECCCCcccccccccC-CCCCeEE
Confidence 3888888766655442 22221 11 1123332 2 66666666555 89999999 77777766653 1134556
Q ss_pred EEEEeC--CCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 303 LAYSKS--EDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 303 ~~~~~~--g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+.++++ |+.++.. ..++.+..||++++.
T Consensus 105 v~~sp~~~~~~l~sg----------s~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 105 VQWAPHEYGPLLLVA----------SSDGKVSVVEFKENG 134 (753)
T ss_dssp EEECCGGGCSEEEEE----------ETTSEEEEEECCSSS
T ss_pred EEECCCCCCCEEEEE----------eCCCcEEEEEeecCC
Confidence 677776 7777776 467899999998873
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.04 E-value=1e+02 Score=30.43 Aligned_cols=188 Identities=10% Similarity=0.071 Sum_probs=96.7
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC-
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN- 187 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~- 187 (383)
+.+|+....+..+.|||..|++....-... ......+.+.|... + ++... ....+.+|+..++
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~-~-l~~~~-------~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-------PDYIRSIAVHPTKP-Y-VLSGS-------DDLTVKLWNWENNW 130 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSS-E-EEEEE-------TTSEEEEEEGGGTS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecC-------CCCEEEEEEeCCCC-E-EEEEc-------CCCEEEEEECCCCc
Confidence 335555555678999999888765322211 11233466665432 3 32222 2456788888765
Q ss_pred ceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE--
Q 016752 188 SWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-- 261 (383)
Q Consensus 188 ~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-- 261 (383)
.....-..... .-..+.+ +|.....+..+. .|..+|+.+..... +..+... .. ..+...
T Consensus 131 ~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~---~v--~~~~~~~~ 195 (814)
T 3mkq_A 131 ALEQTFEGHEH----FVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQER---GV--NYVDYYPL 195 (814)
T ss_dssp EEEEEEECCSS----CEEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTT---CC--CEEEECCS
T ss_pred eEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCC---CE--EEEEEEEC
Confidence 22111100000 0022222 344444443332 48889987654322 2221111 11 112222
Q ss_pred -CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 262 -SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 262 -~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
+|.+.++..... .+.+|-++ +. ...++.. -......+.++++|..++.. ..++.+..||+.+.
T Consensus 196 ~~~~~l~~~~~dg--~i~~~d~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~----------~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 196 PDKPYMITASDDL--TIKIWDYQTKS--CVATLEG-HMSNVSFAVFHPTLPIIISG----------SEDGTLKIWNSSTY 260 (814)
T ss_dssp TTCCEEEEECTTS--EEEEEETTTTE--EEEEEEC-CSSCEEEEEECSSSSEEEEE----------ETTSCEEEEETTTC
T ss_pred CCCCEEEEEeCCC--EEEEEECCCCc--EEEEEcC-CCCCEEEEEEcCCCCEEEEE----------eCCCeEEEEECCCC
Confidence 566666655444 89999887 43 2233332 11235566777888876666 35778999999987
Q ss_pred eEE
Q 016752 340 KAA 342 (383)
Q Consensus 340 ~~~ 342 (383)
+..
T Consensus 261 ~~~ 263 (814)
T 3mkq_A 261 KVE 263 (814)
T ss_dssp SEE
T ss_pred cEE
Confidence 765
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=66.36 E-value=61 Score=27.90 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=45.9
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
|.+.+....+. .+.||.++ ........+.. -.....-+.+.++++.|+.. ..++.+..||+++++.
T Consensus 54 g~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~----------~~dg~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWAN--DVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTA----------SCDKTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETTS--EEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEE----------ETTSEEEEEETTTTEE
T ss_pred ceEEEEECCCC--cEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEE----------cCCCcEEEEEcCCCCc
Confidence 46666665555 89999998 34443333332 11335566777788877766 3678899999999987
Q ss_pred EEEE
Q 016752 342 ADQV 345 (383)
Q Consensus 342 ~~~v 345 (383)
. .+
T Consensus 121 ~-~~ 123 (368)
T 3mmy_A 121 I-QI 123 (368)
T ss_dssp E-EE
T ss_pred e-ee
Confidence 7 53
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=65.98 E-value=77 Score=28.65 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=46.8
Q ss_pred EEEEEECCCce----eeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeE
Q 016752 228 LIVAFNLESEE----FQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVK 301 (383)
Q Consensus 228 ~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~ 301 (383)
.|..+|+.+.. ...+.... ... ..+... +|. +.+...... .+.||-+...=..+..+.. -.....
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~----~~v--~~i~~~p~~~~~l~tg~~dg--~v~vwd~~~~~~~~~~~~~-h~~~v~ 325 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHT----AEV--NCLSFNPYSEFILATGSADK--TVALWDLRNLKLKLHSFES-HKDEIF 325 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCS----SCE--EEEEECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEEC-CSSCEE
T ss_pred eEEEEECCCCCCCcceeEeecCC----CCe--EEEEeCCCCCCEEEEEeCCC--eEEEEeCCCCCCCeEEeec-CCCCEE
Confidence 48899998652 22222111 111 123332 344 555555444 8999998721122333332 112344
Q ss_pred EEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 302 ALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 302 ~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
-+.++++++.+++.. ..++.+..||+.+
T Consensus 326 ~i~~sp~~~~~l~s~---------~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 326 QVQWSPHNETILASS---------GTDRRLHVWDLSK 353 (430)
T ss_dssp EEEECSSCTTEEEEE---------ETTSCCEEEEGGG
T ss_pred EEEECCCCCCEEEEE---------eCCCcEEEEeCCC
Confidence 556666665444442 3456778888776
No 110
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=65.17 E-value=69 Score=27.81 Aligned_cols=188 Identities=13% Similarity=0.192 Sum_probs=93.9
Q ss_pred Ce-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+| +|+....+..+.|||..+++....-+... .....+.+.|.. .+- +... ....+.+|+..++
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~-------~~v~~~~~s~~~-~~l-~s~~-------~d~~v~iw~~~~~ 129 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS-------SWVMTCAYAPSG-NYV-ACGG-------LDNICSIYNLKTR 129 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSS-------SCEEEEEECTTS-SEE-EEEE-------TTCEEEEEETTTC
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeecCC-------ccEEEEEECCCC-CEE-EEEe-------CCCeEEEEECccC
Confidence 44 44444456689999988877543221111 123345666533 332 2222 2356788887764
Q ss_pred c--eEEeccCCCeeeecCCcce-e-eCceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-
Q 016752 188 S--WRRIRVDFPYYILHGWDGT-F-ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 188 ~--Wr~~~~~~p~~~~~~~~~v-~-~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~- 261 (383)
. .+... ..... ...-..+ + -+|.+. .+..+ ..|..+|+.+..... +..... . -..+...
T Consensus 130 ~~~~~~~~-~~~~h-~~~v~~~~~~~~~~l~-s~s~d------~~i~~wd~~~~~~~~~~~~h~~----~--v~~~~~~~ 194 (340)
T 1got_B 130 EGNVRVSR-ELAGH-TGYLSCCRFLDDNQIV-TSSGD------TTCALWDIETGQQTTTFTGHTG----D--VMSLSLAP 194 (340)
T ss_dssp SBSCEEEE-EEECC-SSCEEEEEEEETTEEE-EEETT------SCEEEEETTTTEEEEEECCCSS----C--EEEEEECT
T ss_pred CCcceeEE-EecCC-CccEEEEEECCCCcEE-EEECC------CcEEEEECCCCcEEEEEcCCCC----c--eEEEEECC
Confidence 2 22211 00000 0000111 1 134422 22222 138889998765432 222111 1 1123333
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|.+.+...... .+.+|-++ +. ...++.. -.....-++++++|+.++.. ..++.+..||+++++
T Consensus 195 ~~~~l~sg~~d~--~v~~wd~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~l~s~----------s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 195 DTRLFVSGACDA--SAKLWDVREGM--CRQTFTG-HESDINAICFFPNGNAFATG----------SDDATCRLFDLRADQ 259 (340)
T ss_dssp TSSEEEEEETTS--CEEEEETTTCS--EEEEECC-CSSCEEEEEECTTSSEEEEE----------ETTSCEEEEETTTTE
T ss_pred CCCEEEEEeCCC--cEEEEECCCCe--eEEEEcC-CcCCEEEEEEcCCCCEEEEE----------cCCCcEEEEECCCCc
Confidence 566666666555 89999887 32 2223321 11335566777888776666 367789999998876
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 260 ~~ 261 (340)
T 1got_B 260 EL 261 (340)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 111
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=65.10 E-value=42 Score=28.63 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=57.5
Q ss_pred EEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEE
Q 016752 228 LIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAY 305 (383)
Q Consensus 228 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~ 305 (383)
.|..+|+.+.+...+.++.... . ...+... +|+..++. . ..+.+|-++ ++ ....+.. +....-+.+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~~~--~--~~v~~~d~~~~~--~~~~~~~--~~~~~~~~~ 287 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV--F--YFSTAVNPAKTRAFGA--Y--NVLESFDLEKNA--SIKRVPL--PHSYYSVNV 287 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS--C--EEEEEECTTSSEEEEE--E--SEEEEEETTTTE--EEEEEEC--SSCCCEEEE
T ss_pred ceEEEeCCCCCceEeecCCCCC--c--eeeEEECCCCCEEEEe--C--CeEEEEECCCCc--CcceecC--CCceeeEEE
Confidence 4789999888765444332211 1 1123332 45544443 2 267777776 32 2333432 122345677
Q ss_pred EeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 306 SKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 306 ~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
.++|+.+++. ..+..+..||+++++....+...
T Consensus 288 s~dg~~l~~~----------~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 288 STDGSTVWLG----------GALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CTTSCEEEEE----------SBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCCCEEEEE----------cCCCcEEEEECcCCcEEEEEEcC
Confidence 7888888887 35778999999998866455443
No 112
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=65.01 E-value=86 Score=28.86 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=50.1
Q ss_pred CCeEEEEEecCCC-----CcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCC-EEEEEeccCCCccccCCCcEEEEE
Q 016752 262 SGCLYFSCLCNYP-----QPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSED-KVLVDKFKYGEEDDDINRWELYWY 334 (383)
Q Consensus 262 ~G~L~~~~~~~~~-----~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~v~l~~~~~~~~~~~~~~~~~~~y 334 (383)
+++|++....... ..=.||+++ ..+..+.+|+. +....-+.+.++|+ .+|... ..+..+..+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n---------~~s~~VsVI 398 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEIDSINVSQDAEPLLYALS---------AGTQTLHIY 398 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEE---------TTTTEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEc---------CCCCeEEEE
Confidence 4677777542110 134799999 88888888874 33344566678888 777773 357899999
Q ss_pred eCCCCeEEEE
Q 016752 335 DPQSQKAADQ 344 (383)
Q Consensus 335 dl~~~~~~~~ 344 (383)
|+.+.+....
T Consensus 399 D~~t~kvv~t 408 (426)
T 3c75_H 399 DAATGEELRS 408 (426)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCCEEEE
Confidence 9999998744
No 113
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=64.97 E-value=76 Score=28.24 Aligned_cols=195 Identities=11% Similarity=0.078 Sum_probs=96.1
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..+++....-... ......+.+++ + .++... ....+.+|+.+...-.
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~---~-~l~~~~-------~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMAGH-------QARVGCLSWNR---H-VLSSGS-------RSGAIHHHDVRIANHQ 209 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCC-------SSCEEEEEEET---T-EEEEEE-------TTSEEEEEETTSSSCE
T ss_pred EEEEECCCCeEEEEECcCCeEEEEecCC-------CCceEEEEECC---C-EEEEEc-------CCCCEEEEecccCcce
Confidence 4444444567888888777654322211 11223344443 2 222222 2456778887743211
Q ss_pred --EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCe
Q 016752 191 --RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGC 264 (383)
Q Consensus 191 --~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~ 264 (383)
... ...... .++.+ +|.....+..+. .|..+|+.+......... ... . -..+... ++.
T Consensus 210 ~~~~~-~~~~~v----~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~-~~~--~--v~~~~~~p~~~~ 273 (401)
T 4aez_A 210 IGTLQ-GHSSEV----CGLAWRSDGLQLASGGNDN------VVQIWDARSSIPKFTKTN-HNA--A--VKAVAWCPWQSN 273 (401)
T ss_dssp EEEEE-CCSSCE----EEEEECTTSSEEEEEETTS------CEEEEETTCSSEEEEECC-CSS--C--CCEEEECTTSTT
T ss_pred eeEEc-CCCCCe----eEEEEcCCCCEEEEEeCCC------eEEEccCCCCCccEEecC-Ccc--e--EEEEEECCCCCC
Confidence 111 000000 12222 555444444432 388999987654332111 110 1 1123333 334
Q ss_pred EEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEE
Q 016752 265 LYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAAD 343 (383)
Q Consensus 265 L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~ 343 (383)
|.+.........+.+|-++ +.-. ..+.. +....-+.++++|..++...- ..++.+..||+.+++...
T Consensus 274 ll~~~~gs~d~~i~i~d~~~~~~~--~~~~~--~~~v~~~~~s~~~~~l~~~~g--------~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 274 LLATGGGTMDKQIHFWNAATGARV--NTVDA--GSQVTSLIWSPHSKEIMSTHG--------FPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EEEEECCTTTCEEEEEETTTCCEE--EEEEC--SSCEEEEEECSSSSEEEEEEC--------TTTCEEEEEEEETTEEEE
T ss_pred EEEEecCCCCCEEEEEECCCCCEE--EEEeC--CCcEEEEEECCCCCeEEEEee--------cCCCcEEEEecCCcccee
Confidence 5555432122389999988 4332 33332 233556777788887777510 257799999999987772
Q ss_pred EEEEeccC
Q 016752 344 QVTIHGVP 351 (383)
Q Consensus 344 ~v~~~~~~ 351 (383)
...+.+..
T Consensus 342 ~~~~~~h~ 349 (401)
T 4aez_A 342 QVDIPAHD 349 (401)
T ss_dssp EEEEECCS
T ss_pred EEEecCCC
Confidence 33444443
No 114
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=64.94 E-value=69 Score=27.74 Aligned_cols=201 Identities=12% Similarity=0.062 Sum_probs=91.3
Q ss_pred cCeeEEEec-CCCcEEEEcCCcc--ceeecCCCCCCC-cCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 108 CNGLIALKN-DENGIAFWNPSTK--EHLILPKFWGDL-KDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 108 ~~GLll~~~-~~~~~~V~NP~T~--~~~~LP~~~~~~-~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
.+|-|.+.. ....++++||-.+ ....+....... .......-.++.+|+..+. ++.... .....+.+|+
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~--lyv~d~-----~~~~~I~~~~ 172 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA--VFVSDG-----YCNSRIVQFS 172 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC--EEEEEC-----SSCCEEEEEC
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe--EEEEeC-----CCCCeEEEEc
Confidence 345444443 4567888888665 333443211100 0001223456788874443 222220 0245677777
Q ss_pred cCCCceEEecc--CC----CeeeecCCcceee--C-ceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCe
Q 016752 184 LRSNSWRRIRV--DF----PYYILHGWDGTFA--D-GHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNV 253 (383)
Q Consensus 184 s~~~~Wr~~~~--~~----p~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~ 253 (383)
.....-+.... .- +..+ ....++.+ + |.+|+...... .|..||+.+.++ ..+..+.... ..+
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~~~------~I~~~~~~~G~~~~~~~~~~~~~-~~~ 244 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADRENG------RIQCFKTDTKEFVREIKHASFGR-NVF 244 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETTTT------EEEEEETTTCCEEEEECCTTTTT-CEE
T ss_pred CCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECCCC------EEEEEECCCCcEEEEEeccccCC-Ccc
Confidence 44332222210 00 1111 11145555 4 78888764433 599999985554 4455443221 111
Q ss_pred eeeEEEEECCeEEEEEec-----CCCCcEEEEEeC-CceeeeEEEcCCCC--ceeEEEEEEeCCCEEEEEeccCCCcccc
Q 016752 254 LVMFVGNFSGCLYFSCLC-----NYPQPVDIWVLK-GCWTKAFSFHRSVG--DYVKALAYSKSEDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 254 ~~~~L~~~~G~L~~~~~~-----~~~~~l~iW~l~-~~W~~~~~i~~~~~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~ 325 (383)
.+....|.++..... .....+.+|.++ +... ..+...-+ ....-+++.++| .||+..
T Consensus 245 ---~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG-~lyvad--------- 309 (329)
T 3fvz_A 245 ---AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII--DVFKPVRKHFDMPHDIVASEDG-TVYIGD--------- 309 (329)
T ss_dssp ---EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE--EEECCSSSCCSSEEEEEECTTS-EEEEEE---------
T ss_pred ---eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE--EEEcCCCCccCCeeEEEECCCC-CEEEEE---------
Confidence 222223433333221 112267777766 5433 33432111 223345555665 677763
Q ss_pred CCCcEEEEEeCCC
Q 016752 326 INRWELYWYDPQS 338 (383)
Q Consensus 326 ~~~~~~~~ydl~~ 338 (383)
.....+..|+++.
T Consensus 310 ~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 310 AHTNTVWKFTLTE 322 (329)
T ss_dssp SSSCCEEEEEEEE
T ss_pred CCCCEEEEEeCCc
Confidence 3455666666544
No 115
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=64.82 E-value=66 Score=27.45 Aligned_cols=142 Identities=11% Similarity=0.084 Sum_probs=81.8
Q ss_pred ccEEEEEEcCCCceEEeccCCCeeeecCCcc-eeeCceEEEEEecCCCCCCccEEEEEECCCce-eeEecCCCcCCcCCe
Q 016752 176 YTEVSVYSLRSNSWRRIRVDFPYYILHGWDG-TFADGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVPLPHLEDKKNV 253 (383)
Q Consensus 176 ~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~-v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~ 253 (383)
...+.+++..++.=.... .++.. ....+ ...++.+|.+..... .+.+||..+.+ -..|+.|.. ++
T Consensus 64 ~S~v~~vD~~Tgkv~~~~-~l~~~--~FgeGit~~g~~ly~ltw~~~------~v~v~D~~t~~~~~ti~~~~e----G~ 130 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQI-ELGKR--YFGEGISDWKDKIVGLTWKNG------LGFVWNIRNLRQVRSFNYDGE----GW 130 (262)
T ss_dssp EEEEEEECTTTCCEEEEE-ECCTT--CCEEEEEEETTEEEEEESSSS------EEEEEETTTCCEEEEEECSSC----CC
T ss_pred CceEEEEECCCCcEEEEE-ecCCc--cceeEEEEeCCEEEEEEeeCC------EEEEEECccCcEEEEEECCCC----ce
Confidence 457788888887522111 12211 11122 345678888865443 49999998754 456776642 22
Q ss_pred eeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCC-Cc---eeEEEEEEeCCCEEEEEeccCCCccccCCC
Q 016752 254 LVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSV-GD---YVKALAYSKSEDKVLVDKFKYGEEDDDINR 328 (383)
Q Consensus 254 ~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~-~~---~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~ 328 (383)
.|+..++.|++... . =.||+++ ..=....+|.... +. ...-+.+ .+ +.||... ...
T Consensus 131 ---glt~dg~~L~~SdG-s----~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~-G~lyan~---------w~~ 191 (262)
T 3nol_A 131 ---GLTHNDQYLIMSDG-T----PVLRFLDPESLTPVRTITVTAHGEELPELNELEW-VD-GEIFANV---------WQT 191 (262)
T ss_dssp ---CEEECSSCEEECCS-S----SEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ET-TEEEEEE---------TTS
T ss_pred ---EEecCCCEEEEECC-C----CeEEEEcCCCCeEEEEEEeccCCccccccceeEE-EC-CEEEEEE---------ccC
Confidence 34545566776542 1 2588888 4445556666411 11 1111222 24 4788874 356
Q ss_pred cEEEEEeCCCCeEEEEEEEec
Q 016752 329 WELYWYDPQSQKAADQVTIHG 349 (383)
Q Consensus 329 ~~~~~ydl~~~~~~~~v~~~~ 349 (383)
..+...|++|+++...+...+
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTT
T ss_pred CeEEEEECCCCcEEEEEECCc
Confidence 789999999999885665543
No 116
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=64.77 E-value=1e+02 Score=29.64 Aligned_cols=195 Identities=10% Similarity=-0.076 Sum_probs=97.3
Q ss_pred CcEEEEcCCc------cceeecC-CCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCC-cccEEEEEEcC-CCce
Q 016752 119 NGIAFWNPST------KEHLILP-KFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENV-EYTEVSVYSLR-SNSW 189 (383)
Q Consensus 119 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~-~~~~~~vyss~-~~~W 189 (383)
..++++|..+ ++...|. .... ....+.+.|. +++-++.-. ...... ....+.+++.. ++.+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~SpD-G~~la~~~~-~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR--------FVTGPRLSPD-GRQAVWLAW-DHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS--------EECCCEECTT-SSEEEEEEE-CTTCCTTTCEEEEEEEECTTSCE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC--------cccCceECCC-CCEEEEEEC-CCCCCCCCCcEEEEEEECCCCcc
Confidence 4799999998 7777665 3211 1222444443 333322221 110000 23578888888 5733
Q ss_pred ---EEeccCCCeeeecCCccee-eCceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCCee--eeEEEEE-
Q 016752 190 ---RRIRVDFPYYILHGWDGTF-ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKNVL--VMFVGNF- 261 (383)
Q Consensus 190 ---r~~~~~~p~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~--~~~L~~~- 261 (383)
+.+....... ...+.+ -||.+|+...... ...|..+|+.+.++..+. .........+. ...+...
T Consensus 231 ~~~~~l~~~~~~~---~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~ 303 (662)
T 3azo_A 231 ADTRTLLGGPEEA---IAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA 303 (662)
T ss_dssp EEEEEEEEETTBC---EEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT
T ss_pred cccEEeCCCCCce---EcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeC
Confidence 3332110000 001222 2788887765432 235999999877776542 21111100010 0123444
Q ss_pred CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
+|++.+.... . ...||.++ +. ..++.... .....+. ..+++.+++..... .....++.+|+.+
T Consensus 304 ~~~~~~~~~~-~--~~~l~~~d~~~~~---~~~l~~~~-~~~~~~~-s~~~~~~~~~~~~~------~~~~~i~~~d~~~ 369 (662)
T 3azo_A 304 NGLIAVVHGK-G--AAVLGILDPESGE---LVDAAGPW-TEWAATL-TVSGTRAVGVAASP------RTAYEVVELDTVT 369 (662)
T ss_dssp TSCEEEEEBS-S--SCEEEEEETTTTE---EEECCSSC-CEEEEEE-EEETTEEEEEEEET------TEEEEEEEEETTT
T ss_pred CCEEEEEEEc-C--ccEEEEEECCCCc---EEEecCCC-CeEEEEE-ecCCCEEEEEEcCC------CCCCEEEEEECCC
Confidence 6787776665 3 78999887 33 23443211 1222231 44566666652100 1224788999999
Q ss_pred CeEEEEE
Q 016752 339 QKAADQV 345 (383)
Q Consensus 339 ~~~~~~v 345 (383)
++.+ .+
T Consensus 370 g~~~-~l 375 (662)
T 3azo_A 370 GRAR-TI 375 (662)
T ss_dssp CCEE-EE
T ss_pred CceE-Ee
Confidence 9887 65
No 117
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=63.36 E-value=78 Score=27.81 Aligned_cols=188 Identities=12% Similarity=0.014 Sum_probs=89.0
Q ss_pred CcCeeEEE-ecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIAL-KNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
+.+|-.++ ...+..+.|||..|++....-... ......+.+.+..+.+ ++... ....+.+|+.+
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-------~~~v~~v~~s~~~~~~-~~s~~-------~dg~v~~wd~~ 212 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-------SSEVNCVAACPGKDTI-FLSCG-------EDGRILLWDTR 212 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTCSSC-EEEEE-------TTSCEEECCTT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-------CCCEEEEEEccCCCce-eeeec-------cCCceEEEECC
Confidence 44554443 335567999999988765332211 1123345555543332 22222 13456788777
Q ss_pred CCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF 261 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~ 261 (383)
++.-.... ..... ...-..+.+ ++.+...+..+. .|..+|+.+.+. ..+..+.. . -..+...
T Consensus 213 ~~~~~~~~-~~~~~-~~~v~~v~~sp~~~~~la~g~~d~------~i~~wd~~~~~~~~~~~~~~~----~--v~~l~~s 278 (357)
T 4g56_B 213 KPKPATRI-DFCAS-DTIPTSVTWHPEKDDTFACGDETG------NVSLVNIKNPDSAQTSAVHSQ----N--ITGLAYS 278 (357)
T ss_dssp SSSCBCBC-CCTTC-CSCEEEEEECTTSTTEEEEEESSS------CEEEEESSCGGGCEEECCCSS----C--EEEEEEC
T ss_pred CCceeeee-eeccc-cccccchhhhhcccceEEEeeccc------ceeEEECCCCcEeEEEeccce----e--EEEEEEc
Confidence 65421111 00000 000022332 233333333322 388889877543 22332211 1 1123332
Q ss_pred -CC-eEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEe-CCCEEEEEeccCCCccccCCCcEEEEEeCC
Q 016752 262 -SG-CLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSK-SEDKVLVDKFKYGEEDDDINRWELYWYDPQ 337 (383)
Q Consensus 262 -~G-~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~-~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~ 337 (383)
+| .+.+...... ++.||-++ ++ ....+... ..+.-+++++ ++..|.-. ..++.+..||+.
T Consensus 279 p~~~~~lasgs~D~--~i~iwd~~~~~--~~~~~~H~--~~V~~vafsP~d~~~l~s~----------s~Dg~v~iW~~~ 342 (357)
T 4g56_B 279 YHSSPFLASISEDC--TVAVLDADFSE--VFRDLSHR--DFVTGVAWSPLDHSKFTTV----------GWDHKVLHHHLP 342 (357)
T ss_dssp SSSSCCEEEEETTS--CEEEECTTSCE--EEEECCCS--SCEEEEEECSSSTTEEEEE----------ETTSCEEEEECC
T ss_pred CCCCCEEEEEeCCC--EEEEEECCCCc--EeEECCCC--CCEEEEEEeCCCCCEEEEE----------cCCCeEEEEECC
Confidence 44 4444444444 79999877 42 22233321 3355567775 66655444 367789999986
Q ss_pred CC
Q 016752 338 SQ 339 (383)
Q Consensus 338 ~~ 339 (383)
++
T Consensus 343 ~~ 344 (357)
T 4g56_B 343 SE 344 (357)
T ss_dssp --
T ss_pred CC
Confidence 54
No 118
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=63.27 E-value=66 Score=26.90 Aligned_cols=190 Identities=13% Similarity=0.115 Sum_probs=96.4
Q ss_pred CcCeeEEEecC--CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 107 SCNGLIALKND--ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 107 s~~GLll~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
..+|.|.+... ...+.++|+..+....+..... ....++.+|+.. +++.... ....+.+|+.
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~-------~~~~~i~~~~~g---~l~v~~~------~~~~i~~~~~ 149 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL-------QHPRGVTVDNKG---RIIVVEC------KVMRVIIFDQ 149 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC-------SCEEEEEECTTS---CEEEEET------TTTEEEEECT
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC-------CCceEEEEeCCC---CEEEEEC------CCCEEEEEcC
Confidence 45666665552 5678999965554444543211 123356677643 2333221 2346777776
Q ss_pred CCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 261 (383)
....-+........ ....++.+ +|.+|...... ..|..||...+....+..+.... . ...++..
T Consensus 150 ~g~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g~~~-~---p~~i~~d~ 216 (286)
T 1q7f_A 150 NGNVLHKFGCSKHL---EFPNGVVVNDKQEIFISDNRA------HCVKVFNYEGQYLRQIGGEGITN-Y---PIGVGINS 216 (286)
T ss_dssp TSCEEEEEECTTTC---SSEEEEEECSSSEEEEEEGGG------TEEEEEETTCCEEEEESCTTTSC-S---EEEEEECT
T ss_pred CCCEEEEeCCCCcc---CCcEEEEECCCCCEEEEECCC------CEEEEEcCCCCEEEEEccCCccC-C---CcEEEECC
Confidence 54433333200000 00123443 57877654332 24999999877666665432211 1 1234443
Q ss_pred CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
+|.|++...... ..+.+|..++.-.......... ....-+++.++| .+++.. .+..+..|+...
T Consensus 217 ~G~l~v~~~~~~-~~i~~~~~~g~~~~~~~~~~~~-~~~~~i~~~~~g-~l~vs~----------~~~~v~v~~~~~ 280 (286)
T 1q7f_A 217 NGEILIADNHNN-FNLTIFTQDGQLISALESKVKH-AQCFDVALMDDG-SVVLAS----------KDYRLYIYRYVQ 280 (286)
T ss_dssp TCCEEEEECSSS-CEEEEECTTSCEEEEEEESSCC-SCEEEEEEETTT-EEEEEE----------TTTEEEEEECSC
T ss_pred CCCEEEEeCCCC-EEEEEECCCCCEEEEEcccCCC-CcceeEEECCCC-cEEEEC----------CCCeEEEEEccc
Confidence 688887765432 1677776544333322222111 123345666665 577772 456788887654
No 119
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=62.78 E-value=71 Score=27.15 Aligned_cols=199 Identities=12% Similarity=0.079 Sum_probs=0.0
Q ss_pred eeCcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 105 IDSCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 105 ~~s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+...+.+|+....+..+.|||..|++...--..... ....+.+.|... .++... ....+.+++.
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~-------~v~~~~~~~~~~--~l~sgs-------~D~~v~lWd~ 126 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-------YIRSIAVHPTKP--YVLSGS-------DDLTVKLWNW 126 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-------CEEEEEECSSSS--EEEEEE-------TTSCEEEEEG
T ss_pred EeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC-------cEEEEEEcCCCC--EEEEEC-------CCCeEEEEEC
Q ss_pred CCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEEC
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNFS 262 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~ 262 (383)
+++ |.... .+......-....+. +|.+...+..+. .|..+|+.+..-.............. ......-+
T Consensus 127 ~~~-~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~ 197 (304)
T 2ynn_A 127 ENN-WALEQ-TFEGHEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPD 197 (304)
T ss_dssp GGT-TEEEE-EECCCCSCEEEEEECTTCTTEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCEEE-EEECCSTT
T ss_pred CCC-cchhh-hhcccCCcEEEEEECCCCCCEEEEEeCCC------eEEEEECCCCCccceeccCCcCcEEE-EEEEEcCC
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+.+.+...... .+.||-++ +.=.....-.. ....-+.+++++..|+-. ..++.+..||+++.+.
T Consensus 198 ~~~l~s~s~D~--~i~iWd~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~----------s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 198 KPYMITASDDL--TIKIWDYQTKSCVATLEGHM---SNVSFAVFHPTLPIIISG----------SEDGTLKIWNSSTYKV 262 (304)
T ss_dssp CCEEEEEETTS--EEEEEETTTTEEEEEEECCS---SCEEEEEECSSSSEEEEE----------ETTSCEEEEETTTCCE
T ss_pred CCEEEEEcCCC--eEEEEeCCCCccceeeCCCC---CCEEEEEECCCCCEEEEE----------cCCCeEEEEECCCCce
Q ss_pred EEE
Q 016752 342 ADQ 344 (383)
Q Consensus 342 ~~~ 344 (383)
. +
T Consensus 263 ~-~ 264 (304)
T 2ynn_A 263 E-K 264 (304)
T ss_dssp E-E
T ss_pred e-e
No 120
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=61.62 E-value=1.3e+02 Score=29.69 Aligned_cols=186 Identities=12% Similarity=0.128 Sum_probs=92.3
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|.....+..+.|||..|++...--... ......+.+.|.. .+ ++... ....+.||+..++...
T Consensus 27 ~la~~~~~g~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~~-~~-l~~~~-------~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWNYETQVEVRSIQVT-------ETPVRAGKFIARK-NW-IIVGS-------DDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECC-------SSCEEEEEEEGGG-TE-EEEEE-------TTSEEEEEETTTCCEE
T ss_pred EEEEEeCCCEEEEEECCCCceEEEEecC-------CCcEEEEEEeCCC-CE-EEEEe-------CCCeEEEEECCCCcEE
Confidence 3443444557889998887654322111 1233456666643 23 22222 2457889998887653
Q ss_pred EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCc-eeeE-ecCCCcCCcCCeeeeEEEEE--CCe
Q 016752 191 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESE-EFQE-VPLPHLEDKKNVLVMFVGNF--SGC 264 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e-~~~~-i~~P~~~~~~~~~~~~L~~~--~G~ 264 (383)
..-....... ..+.+ +|..-..+..+ ..|..+|+.++ .... +.... .. -..+... +|.
T Consensus 91 ~~~~~~~~~v----~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~-----~~-v~~~~~~p~~~~ 154 (814)
T 3mkq_A 91 VDFEAHPDYI----RSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHE-----HF-VMCVAFNPKDPS 154 (814)
T ss_dssp EEEECCSSCE----EEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECCS-----SC-EEEEEEETTEEE
T ss_pred EEEecCCCCE----EEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCCC-----Cc-EEEEEEEcCCCC
Confidence 2210111000 11111 34332223322 24888888765 3222 22111 11 1123333 455
Q ss_pred EEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEe--CCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 265 LYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSK--SEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 265 L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~--~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+.++..... .+.+|-++ +.-. ..+..........+.+.+ +|..++.. ..++.+..||+++++.
T Consensus 155 ~l~~~~~dg--~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~----------~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 155 TFASGCLDR--TVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITA----------SDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEEEEETTS--EEEEEETTCSSCS--EEEECCCTTCCCEEEECCSTTCCEEEEE----------CTTSEEEEEETTTTEE
T ss_pred EEEEEeCCC--eEEEEECCCCcce--eEEecCCCCCEEEEEEEECCCCCEEEEE----------eCCCEEEEEECCCCcE
Confidence 555555444 89999987 3222 222211112234455555 67776666 4677899999988876
Q ss_pred E
Q 016752 342 A 342 (383)
Q Consensus 342 ~ 342 (383)
.
T Consensus 221 ~ 221 (814)
T 3mkq_A 221 V 221 (814)
T ss_dssp E
T ss_pred E
Confidence 5
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=61.09 E-value=75 Score=26.86 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCCcEEEEEeC--------CceeeeEEEcCCCCceeEEEEEEeC--CCEEEEEeccCCCccccCCCcEE
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK--------GCWTKAFSFHRSVGDYVKALAYSKS--EDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~--------~~W~~~~~i~~~~~~~~~~~~~~~~--g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
+|.+.+...... .+.||.++ ..|.....+.. -.....-+.+.++ +..++.. ..++.+
T Consensus 70 d~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~----------~~dg~v 136 (351)
T 3f3f_A 70 YGRIIASASYDK--TVKLWEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACL----------GNDGIL 136 (351)
T ss_dssp GCSEEEEEETTS--CEEEEEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE----------ETTCEE
T ss_pred CCCEEEEEcCCC--eEEEEecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEe----------cCCCcE
Confidence 377766666555 89999997 24555555543 1134555667776 7776666 367889
Q ss_pred EEEeCCCCe
Q 016752 332 YWYDPQSQK 340 (383)
Q Consensus 332 ~~ydl~~~~ 340 (383)
..||+++.+
T Consensus 137 ~iwd~~~~~ 145 (351)
T 3f3f_A 137 RLYDALEPS 145 (351)
T ss_dssp EEEECSSTT
T ss_pred EEecCCChH
Confidence 999988765
No 122
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=61.05 E-value=1.4e+02 Score=29.80 Aligned_cols=201 Identities=13% Similarity=0.140 Sum_probs=97.1
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+|-|-+.... .++++||.++++..+...+.............+..|.... +.+.. ....+..|+..++
T Consensus 272 ~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~----lWigt------~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 272 SQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG----MWLGT------YFGGLNYYHPIRN 340 (795)
T ss_dssp TTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC----EEEEE------SSSCEEEECGGGG
T ss_pred CCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC----EEEEE------CCCCeEEeCCCcc
Confidence 35555555443 6888888888877665432211000012333455554322 23331 1223556666666
Q ss_pred ceEEeccCCCe--eeecCC-cceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCC-----cCCcCCeeeeE
Q 016752 188 SWRRIRVDFPY--YILHGW-DGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPH-----LEDKKNVLVMF 257 (383)
Q Consensus 188 ~Wr~~~~~~p~--~~~~~~-~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~-----~~~~~~~~~~~ 257 (383)
.++... ..+. .+.... .+++. +|. .|++.... .|..+|..+++|..+..+. ...... -..
T Consensus 341 ~~~~~~-~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~------Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~--v~~ 410 (795)
T 4a2l_A 341 RFKNIR-NIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDG------GLNLYNPITQRFTSYTLQEDESARGIGSNN--IKA 410 (795)
T ss_dssp SSEEEC-CCTTSSSCSCSSEEEEEECTTSC-EEEEESSS------CEEEECTTTCCEEEECCC------CCSCSC--EEE
T ss_pred cceEEc-CCCCCCCCCCCeeEEEEECCCCC-EEEEECCC------CeEEEcCCCCcEEEEecCCCCcccCCCCcc--EEE
Confidence 665543 1111 111111 23333 344 56666543 2999999999998876443 111111 123
Q ss_pred EEEE-CCe-EEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCC-ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEE
Q 016752 258 VGNF-SGC-LYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVG-DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYW 333 (383)
Q Consensus 258 L~~~-~G~-L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~-~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ 333 (383)
+.+. +|. |.+... .. .+..+..+ +.+.........++ ..+..+....+ +.|.+.. . ..++.
T Consensus 411 i~~d~~g~~lWigt~-~~--Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt----------~-~Gl~~ 475 (795)
T 4a2l_A 411 VYVDEKKSLVYIGTH-AG--GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGT----------L-SALVR 475 (795)
T ss_dssp EEEETTTTEEEEEET-TT--EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEE----------S-SCEEE
T ss_pred EEEcCCCCEEEEEeC-cC--ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEe----------c-CceeE
Confidence 4443 577 665442 22 35444444 33322211011111 22333333334 4577772 3 57999
Q ss_pred EeCCCCeEEEEE
Q 016752 334 YDPQSQKAADQV 345 (383)
Q Consensus 334 ydl~~~~~~~~v 345 (383)
||+++++++ .+
T Consensus 476 ~~~~~~~~~-~~ 486 (795)
T 4a2l_A 476 FNPEQRSFT-TI 486 (795)
T ss_dssp EETTTTEEE-EC
T ss_pred EeCCCCeEE-Ec
Confidence 999998887 54
No 123
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=61.02 E-value=84 Score=27.36 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=73.0
Q ss_pred ccEEEEEEcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEec-CCCcCCcCC
Q 016752 176 YTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVP-LPHLEDKKN 252 (383)
Q Consensus 176 ~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~ 252 (383)
...+.||+..++.|.... .........-..+.+ +|..-..+..+. .+..+|+.++.+..+. +..+. ..
T Consensus 37 D~~i~iw~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h~--~~ 107 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKS-VLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQDDFECVTTLEGHE--NE 107 (345)
T ss_dssp TSCEEEEEEETTEEEEEE-EECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC-EEEEEEECCCS--SC
T ss_pred CCeEEEEEcCCCcceeee-eeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCCCeEEEEEccCCC--CC
Confidence 345788888888775332 110000000012222 454333333322 2777787776554332 22221 11
Q ss_pred eeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCc
Q 016752 253 VLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRW 329 (383)
Q Consensus 253 ~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~ 329 (383)
-..+... +|.+.+...... .+.||.++ ..+.....+.. -.....-+.++++++.++.. ..++
T Consensus 108 --v~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~----------s~d~ 172 (345)
T 3fm0_A 108 --VKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASA----------SYDD 172 (345)
T ss_dssp --EEEEEECTTSSEEEEEETTS--CEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEE----------ETTS
T ss_pred --ceEEEEeCCCCEEEEEECCC--eEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEE----------eCCC
Confidence 1123333 567666666555 89999998 44544444432 11234556677777766655 3566
Q ss_pred EEEEEeCCCCeEE
Q 016752 330 ELYWYDPQSQKAA 342 (383)
Q Consensus 330 ~~~~ydl~~~~~~ 342 (383)
.+..||.+++++.
T Consensus 173 ~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 173 TVKLYREEEDDWV 185 (345)
T ss_dssp CEEEEEEETTEEE
T ss_pred cEEEEEecCCCEE
Confidence 7888888877654
No 124
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=60.87 E-value=77 Score=26.87 Aligned_cols=191 Identities=13% Similarity=0.085 Sum_probs=89.1
Q ss_pred CeeEEEecCCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+.+|.....+..++++|+.|++.+ .++...... .....+.+. ++ ++. . ....+..|+. ++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~-------~~~~~~~pd-G~--ilv-s-------~~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE-------CNSVAATKA-GE--ILF-S-------YSKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCC-------CCEEEECTT-SC--EEE-E-------CBSEEEEECT-TS
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCC-------CcCeEECCC-CC--EEE-e-------CCCCEEEECC-CC
Confidence 344544445678899999898875 344322110 111223332 22 333 1 1235777887 44
Q ss_pred --ceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcC--CeeeeEEEEECC
Q 016752 188 --SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKK--NVLVMFVGNFSG 263 (383)
Q Consensus 188 --~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~--~~~~~~L~~~~G 263 (383)
.|+... ...... ....+.-||.++....... ..++.||...+....+.+....... .. ...-...+|
T Consensus 66 ~~~W~~~~-~~~~~~--~~~~~~~dG~~lv~~~~~~-----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~-~~v~~~~~G 136 (276)
T 3no2_A 66 RELWNIAA-PAGCEM--QTARILPDGNALVAWCGHP-----STILEVNMKGEVLSKTEFETGIERPHAQF-RQINKNKKG 136 (276)
T ss_dssp CEEEEEEC-CTTCEE--EEEEECTTSCEEEEEESTT-----EEEEEECTTSCEEEEEEECCSCSSGGGSC-SCCEECTTS
T ss_pred CEEEEEcC-CCCccc--cccEECCCCCEEEEecCCC-----CEEEEEeCCCCEEEEEeccCCCCcccccc-cCceECCCC
Confidence 577543 111111 0123345777766554311 2488899876654445433221100 00 000112245
Q ss_pred eEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 264 CLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
.+.++..... .+..|-.+ ..|. +..+. . .. -.....+|+.++.. .....++.+|++|+++
T Consensus 137 ~~lv~~~~~~--~v~~~d~~G~~~w~--~~~~~-~-~~--~~~~~~~g~~~v~~----------~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 137 NYLVPLFATS--EVREIAPNGQLLNS--VKLSG-T-PF--SSAFLDNGDCLVAC----------GDAHCFVQLNLESNRI 198 (276)
T ss_dssp CEEEEETTTT--EEEEECTTSCEEEE--EECSS-C-CC--EEEECTTSCEEEEC----------BTTSEEEEECTTTCCE
T ss_pred CEEEEecCCC--EEEEECCCCCEEEE--EECCC-C-cc--ceeEcCCCCEEEEe----------CCCCeEEEEeCcCCcE
Confidence 5554443222 44444444 2232 11111 0 11 12334566765555 3556899999996665
Q ss_pred EEEE
Q 016752 342 ADQV 345 (383)
Q Consensus 342 ~~~v 345 (383)
.-++
T Consensus 199 ~w~~ 202 (276)
T 3no2_A 199 VRRV 202 (276)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4244
No 125
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=60.84 E-value=1.3e+02 Score=29.60 Aligned_cols=168 Identities=14% Similarity=0.154 Sum_probs=89.7
Q ss_pred EEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC--c-eEEeccCCCeeeecCCcceee-CceEEEEEecCCCCCCc
Q 016752 151 GFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN--S-WRRIRVDFPYYILHGWDGTFA-DGHVHWLVTNNPKDDIE 226 (383)
Q Consensus 151 ~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~--~-Wr~~~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~ 226 (383)
+..+.+ .++|.++.... .......+.+++..++ . |+.+....... ...+.- ++.+|+...... ..
T Consensus 272 ~~~~Sp-DG~~l~~~~~~---~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~----~~~~~~dg~~l~~~s~~~~---~~ 340 (741)
T 1yr2_A 272 GASVSS-DGRWVVITSSE---GTDPVNTVHVARVTNGKIGPVTALIPDLKAQ----WDFVDGVGDQLWFVSGDGA---PL 340 (741)
T ss_dssp EEEECT-TSCEEEEEEEC---TTCSCCEEEEEEEETTEECCCEEEECSSSSC----EEEEEEETTEEEEEECTTC---TT
T ss_pred EEEECC-CCCEEEEEEEc---cCCCcceEEEEECCCCCCcccEEecCCCCce----EEEEeccCCEEEEEECCCC---CC
Confidence 444544 34455444331 1112456777888776 6 88775211110 012223 446777665421 23
Q ss_pred cEEEEEECCC--ceeeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEE
Q 016752 227 NLIVAFNLES--EEFQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKA 302 (383)
Q Consensus 227 ~~il~fD~~~--e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~ 302 (383)
..|+..|+.+ +.|..+- |.... . ...+...++.|.+...... ...||+++ +. +...+...-......
T Consensus 341 ~~l~~~d~~~~~~~~~~l~-~~~~~---~-l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~g~--~~~~l~~~~~~~v~~ 411 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVV-PESKD---N-LESVGIAGNRLFASYIHDA--KSQVLAFDLDGK--PAGAVSLPGIGSASG 411 (741)
T ss_dssp CEEEEEECSSSSCEEEEEE-CCCSS---E-EEEEEEEBTEEEEEEEETT--EEEEEEEETTSC--EEEECBCSSSCEEEE
T ss_pred CEEEEEeCCCCccccEEEe-cCCCC---e-EEEEEEECCEEEEEEEECC--EEEEEEEeCCCC--ceeeccCCCCeEEEE
Confidence 4699999987 5777653 32211 1 1123445888887776655 67888887 33 333444210122334
Q ss_pred EEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 303 LAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 303 ~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
+++.++++.|++..... .....++.||+.+++.+ .+
T Consensus 412 ~~~s~d~~~l~~~~ss~------~~P~~i~~~d~~tg~~~-~l 447 (741)
T 1yr2_A 412 LSGRPGDRHAYLSFSSF------TQPATVLALDPATAKTT-PW 447 (741)
T ss_dssp EECCBTCSCEEEEEEET------TEEEEEEEEETTTTEEE-EC
T ss_pred eecCCCCCEEEEEEcCC------CCCCEEEEEECCCCcEE-EE
Confidence 44456777677652000 23457999999998866 44
No 126
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=60.59 E-value=77 Score=26.83 Aligned_cols=185 Identities=11% Similarity=0.098 Sum_probs=95.1
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.||+..+++....-... ......+.+.+.. .+ ++... ....+.+|+..++.-.
T Consensus 37 ~l~s~~~dg~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~-~~-l~s~~-------~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDS-NL-LVSAS-------DDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCC-------SSCEEEEEECTTS-SE-EEEEE-------TTSEEEEEETTTCCEE
T ss_pred EEEEeeCCCeEEEEeCCCcccchhhccC-------CCceEEEEEcCCC-CE-EEEEC-------CCCEEEEEECCCCcEE
Confidence 3433344567889998887765432211 1233456666643 22 22222 2456788888776421
Q ss_pred E-eccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-CCeE
Q 016752 191 R-IRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF-SGCL 265 (383)
Q Consensus 191 ~-~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L 265 (383)
. .. ...... ..+.+ +|.+...+..+. .|..+|+.+.+.. .+..... .. ..+... +|.+
T Consensus 101 ~~~~-~~~~~v----~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~----~v--~~~~~~~~~~~ 163 (312)
T 4ery_A 101 KTLK-GHSNYV----FCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKTLPAHSD----PV--SAVHFNRDGSL 163 (312)
T ss_dssp EEEE-CCSSCE----EEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEEECCCSS----CE--EEEEECTTSSE
T ss_pred EEEc-CCCCCE----EEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEEecCCCC----cE--EEEEEcCCCCE
Confidence 1 11 000000 11111 343333333322 3888999876543 2322111 11 122332 5666
Q ss_pred EEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 266 YFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+...... .+.+|-+. +.-. ..+...-......+.+.++|..++.. ..++.+..||+++.+..
T Consensus 164 l~~~~~d~--~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 164 IVSSSYDG--LCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAA----------TLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTS--CEEEEETTTCCEE--EEECCSSCCCEEEEEECTTSSEEEEE----------ETTTEEEEEETTTTEEE
T ss_pred EEEEeCCC--cEEEEECCCCcee--eEEeccCCCceEEEEECCCCCEEEEE----------cCCCeEEEEECCCCcEE
Confidence 66665555 79999987 4322 22221111234556777888877766 36778999999988765
No 127
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=59.63 E-value=80 Score=26.71 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=39.6
Q ss_pred eEEEEEecCCCCcEEEEEeC---CceeeeEEEc-CCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC-C
Q 016752 264 CLYFSCLCNYPQPVDIWVLK---GCWTKAFSFH-RSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ-S 338 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~-~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~-~ 338 (383)
.+.+...... ++.||.++ ..|.+.. +. ........-+.++++|..|... ..++.+..|+.. .
T Consensus 220 ~~las~s~D~--~v~iWd~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~las~----------~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 220 SYMASVSQDR--TCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALS----------GGDNKVTLWKENLE 286 (297)
T ss_dssp EEEEEEETTS--CEEEEEESSTTSCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEE----------ETTSCEEEEEECTT
T ss_pred eEEEEEECCC--cEEEEEeCCCCCccceee-eecccCCCcEEEEEECCCCCEEEEE----------cCCCcEEEEEECCC
Confidence 4554444444 89999998 3465322 21 1122345556777888766666 356778888876 4
Q ss_pred CeEE
Q 016752 339 QKAA 342 (383)
Q Consensus 339 ~~~~ 342 (383)
++|+
T Consensus 287 g~w~ 290 (297)
T 2pm7_B 287 GKWE 290 (297)
T ss_dssp SCEE
T ss_pred CcEE
Confidence 4566
No 128
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=59.18 E-value=82 Score=26.68 Aligned_cols=140 Identities=10% Similarity=0.095 Sum_probs=72.2
Q ss_pred ccEEEEEEcCCC--ceEEeccC--CCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcC
Q 016752 176 YTEVSVYSLRSN--SWRRIRVD--FPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKK 251 (383)
Q Consensus 176 ~~~~~vyss~~~--~Wr~~~~~--~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 251 (383)
...+.+++.+++ .|+..... -+.. ..+.-+|.++. .... .|..||...+.-..+..|...
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~-----~~~~pdG~ilv-s~~~-------~V~~~d~~G~~~W~~~~~~~~--- 77 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNS-----VAATKAGEILF-SYSK-------GAKMITRDGRELWNIAAPAGC--- 77 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCE-----EEECTTSCEEE-ECBS-------EEEEECTTSCEEEEEECCTTC---
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcC-----eEECCCCCEEE-eCCC-------CEEEECCCCCEEEEEcCCCCc---
Confidence 456678887676 58755411 1111 12233777766 3322 499999955444445554221
Q ss_pred CeeeeEEEE-ECCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCC---ceeEEEEEEeCCCEEEEEeccCCCcccc
Q 016752 252 NVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVG---DYVKALAYSKSEDKVLVDKFKYGEEDDD 325 (383)
Q Consensus 252 ~~~~~~L~~-~~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~---~~~~~~~~~~~g~~v~l~~~~~~~~~~~ 325 (383)
.. ..... .+|.+.++.... .-.|+.++ ++......+..... ....-+....+|+.++..
T Consensus 78 ~~--~~~~~~~dG~~lv~~~~~---~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~---------- 142 (276)
T 3no2_A 78 EM--QTARILPDGNALVAWCGH---PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL---------- 142 (276)
T ss_dssp EE--EEEEECTTSCEEEEEEST---TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE----------
T ss_pred cc--cccEECCCCCEEEEecCC---CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe----------
Confidence 11 11222 367766665431 23556665 54444444432111 112223445677766555
Q ss_pred CCCcEEEEEeCCCCeEEEEEEE
Q 016752 326 INRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 326 ~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
..+..++.||++.+.+- ++..
T Consensus 143 ~~~~~v~~~d~~G~~~w-~~~~ 163 (276)
T 3no2_A 143 FATSEVREIAPNGQLLN-SVKL 163 (276)
T ss_dssp TTTTEEEEECTTSCEEE-EEEC
T ss_pred cCCCEEEEECCCCCEEE-EEEC
Confidence 46778999999966555 5543
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=58.76 E-value=85 Score=26.72 Aligned_cols=185 Identities=11% Similarity=0.001 Sum_probs=93.0
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc-eEEe-ccCCC
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS-WRRI-RVDFP 197 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~-Wr~~-~~~~p 197 (383)
.+.|+++.+++....-+... ....+.++|..+ + ++.... . ....+.+|+...+. -... ....+
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~--------~~~~~~~spdg~-~-l~~~~~---~--~~~~i~~~~~~~~g~~~~~~~~~~~ 173 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPY--------DAVGIAISPNGN-G-LILIDR---S--SANTVRRFKIDADGVLFDTGQEFIS 173 (331)
T ss_dssp EEEEEETTTTEEEEEEECCT--------TEEEEEECTTSS-C-EEEEEE---T--TTTEEEEEEECTTCCEEEEEEEEEC
T ss_pred cEEEEECCCCCeEEEEECCC--------CccceEECCCCC-E-EEEEec---C--CCceEEEEEECCCCcEeecCCcccc
Confidence 79999999888654322211 113567776543 3 222221 0 12226677765432 1111 00000
Q ss_pred eeeecCCcce--eeCce-EEEEEecCCCCCCccEEEEEECCCcee----eEecCCCcCCcCCeeeeEEEEE-CCeEEEEE
Q 016752 198 YYILHGWDGT--FADGH-VHWLVTNNPKDDIENLIVAFNLESEEF----QEVPLPHLEDKKNVLVMFVGNF-SGCLYFSC 269 (383)
Q Consensus 198 ~~~~~~~~~v--~~~G~-lywl~~~~~~~~~~~~il~fD~~~e~~----~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~ 269 (383)
.. .....+ .-+|. +|...... ..|..+|+.+.+. ..++.+... . .+... +|+..++.
T Consensus 174 ~~--~~~~~~~~spdg~~l~v~~~~~------~~v~v~d~~~~~~~~~~~~~~~~~~~----~---~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 174 GG--TRPFNITFTPDGNFAFVANLIG------NSIGILETQNPENITLLNAVGTNNLP----G---TIVVSRDGSTVYVL 238 (331)
T ss_dssp SS--SSEEEEEECTTSSEEEEEETTT------TEEEEEECSSTTSCEEEEEEECSSCC----C---CEEECTTSSEEEEE
T ss_pred CC--CCccceEECCCCCEEEEEeCCC------CeEEEEECCCCcccceeeeccCCCCC----c---eEEECCCCCEEEEE
Confidence 00 000122 22676 44443222 2489999987664 334322111 1 23332 56643333
Q ss_pred ecCCCCcEEEEEeC-CceeeeEEEcCC--CC----ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 270 LCNYPQPVDIWVLK-GCWTKAFSFHRS--VG----DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 270 ~~~~~~~l~iW~l~-~~W~~~~~i~~~--~~----~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.... ..+.+|-++ ++...+..+... .. .....++++++|+.+++.. .....+..||+.++...
T Consensus 239 ~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~---------~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 239 TEST-VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISA---------NISRELKVFTISGKVVG 308 (331)
T ss_dssp CSSE-EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE---------TTTTEEEEEETTSCEEE
T ss_pred EcCC-CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEec---------CCCCcEEEEEecCCccc
Confidence 3222 257777776 555444444431 11 1113468888999888873 34568999999998887
Q ss_pred EEE
Q 016752 343 DQV 345 (383)
Q Consensus 343 ~~v 345 (383)
.+
T Consensus 309 -~~ 310 (331)
T 3u4y_A 309 -YV 310 (331)
T ss_dssp -EC
T ss_pred -ce
Confidence 54
No 130
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=58.66 E-value=1.5e+02 Score=29.51 Aligned_cols=203 Identities=14% Similarity=0.117 Sum_probs=101.0
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+|-|.+......++++||.++++....................+..|... . +.+.. .. .+.+|+..++
T Consensus 224 ~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~---lWigt------~~-Gl~~~~~~~~ 292 (795)
T 4a2l_A 224 SPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQN-R---LWIGT------FN-DLNIYHEGTD 292 (795)
T ss_dssp ETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTS-C---EEEEE------SS-CEEEEETTTT
T ss_pred CCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCC-C---EEEEe------CC-hhheEcCCCC
Confidence 355555554344688899998887766543211000001223334445322 1 23321 12 4677888888
Q ss_pred ceEEeccCCC---eeeecCC-cceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCC---cCCcCCeeeeEE
Q 016752 188 SWRRIRVDFP---YYILHGW-DGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPH---LEDKKNVLVMFV 258 (383)
Q Consensus 188 ~Wr~~~~~~p---~~~~~~~-~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~---~~~~~~~~~~~L 258 (383)
.++... ..+ ..+.... ..++. +|. -|++.... .|..+|..+..|..+.... ...... -..+
T Consensus 293 ~~~~~~-~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~------Gl~~~~~~~~~~~~~~~~~~~~~l~~~~--V~~i 362 (795)
T 4a2l_A 293 SFASYS-SNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFG------GLNYYHPIRNRFKNIRNIPYKNSLSDNV--VSCI 362 (795)
T ss_dssp EEEEEC-CCTTSTTSCSSSCEEEEEECTTSC-EEEEESSS------CEEEECGGGGSSEEECCCTTSSSCSCSS--EEEE
T ss_pred eEEEEe-cCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCC------CeEEeCCCcccceEEcCCCCCCCCCCCe--eEEE
Confidence 887664 211 1111111 22333 455 46666543 2999999988888764322 111111 1234
Q ss_pred EEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEc--C--CCC-ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEE
Q 016752 259 GNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFH--R--SVG-DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 259 ~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~--~--~~~-~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
.+. +|.|.+.... . .+..|..+ +.+.....-. . .+. ..+..+....+|..|.+. .....+
T Consensus 363 ~~d~~g~lWiGt~~-~--Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig----------t~~~Gl 429 (795)
T 4a2l_A 363 VEDKDKNLWIGTND-G--GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG----------THAGGL 429 (795)
T ss_dssp EECTTSCEEEEESS-S--CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE----------ETTTEE
T ss_pred EECCCCCEEEEECC-C--CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE----------eCcCce
Confidence 443 5677765432 2 35555444 4443221100 0 111 223334444454437887 355789
Q ss_pred EEEeCCCCeEEEEE
Q 016752 332 YWYDPQSQKAADQV 345 (383)
Q Consensus 332 ~~ydl~~~~~~~~v 345 (383)
+.||.++++++ .+
T Consensus 430 ~~~d~~~~~~~-~~ 442 (795)
T 4a2l_A 430 SILHRNSGQVE-NF 442 (795)
T ss_dssp EEEETTTCCEE-EE
T ss_pred eEEeCCCCcEE-Ee
Confidence 99999998887 54
No 131
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=57.70 E-value=1.1e+02 Score=27.87 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=65.2
Q ss_pred cceeeC----ceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCC-CcE
Q 016752 205 DGTFAD----GHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYP-QPV 277 (383)
Q Consensus 205 ~~v~~~----G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~-~~l 277 (383)
.++.++ |.||+.... ..|..||+.++....+..+.. . ...++.. +|. |++....... ...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~~~~---~---P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQ-------HPTRLIDFEKEYVSTVYSGLS---K---VRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CEEEEETTEEEEEEEEEBT-------EEEEEEETTTTEEEEEECCCS---C---EEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CEEEECCCCCCeEEEEeCC-------CcEEEEECCCCEEEEEecCCC---C---cceEEEeCCCCEEEEEeCCCCcccce
Confidence 345554 889988754 249999999988776532111 1 1234443 465 7776654321 133
Q ss_pred EEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 278 DIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 278 ~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+|... +.|.....+.. + ....-+++.++++.||+.. ....+++.||+.++...
T Consensus 207 v~~~~~~g~~~~~~~l~~-~-~~p~giavdp~~g~lyv~d---------~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 207 NYILTRESGFKVITELTK-G-QNCNGAETHPINGELYFNS---------WNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EEEEEGGGTSCSEEEEEE-C-SSCCCEEECTTTCCEEEEE---------TTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCceeeeeeecc-C-CCceEEEEeCCCCEEEEEE---------CCCCEEEEEECCCCcEE
Confidence 455554 66664433332 1 1122345556345677774 45678999999888774
No 132
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=57.16 E-value=95 Score=26.77 Aligned_cols=50 Identities=10% Similarity=0.091 Sum_probs=23.9
Q ss_pred EEEEECCCceeeEec-C-CCcCCcCCeeeeEEEE--E-CCeEEEEEecCCCCcEEEEEeC
Q 016752 229 IVAFNLESEEFQEVP-L-PHLEDKKNVLVMFVGN--F-SGCLYFSCLCNYPQPVDIWVLK 283 (383)
Q Consensus 229 il~fD~~~e~~~~i~-~-P~~~~~~~~~~~~L~~--~-~G~L~~~~~~~~~~~l~iW~l~ 283 (383)
|..+|..+..|..+. . ..+. .... ..+.. . +|.+.+...... .+.||.++
T Consensus 273 v~iw~~~~~~~~~~~~~~~~h~-~~~v--~~v~~~~~~~~~~las~s~Dg--~v~~W~~~ 327 (330)
T 2hes_X 273 LAVYEEVDGEWKVFAKRALCHG-VYEI--NVVKWLELNGKTILATGGDDG--IVNFWSLE 327 (330)
T ss_dssp EEEEEEETTEEEEEEEESCTTT-TSCE--EEEEEC-----CCEEEEETTS--EEEEEEC-
T ss_pred EEEEEcCCCceEEEeccccccc-cceE--EEEEEecCCCceEEEEecCCC--cEEEEEec
Confidence 788888877665432 1 1111 1011 12222 2 455555555444 89999864
No 133
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=57.14 E-value=1.1e+02 Score=27.45 Aligned_cols=87 Identities=20% Similarity=0.344 Sum_probs=54.5
Q ss_pred eeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEe
Q 016752 239 FQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDK 316 (383)
Q Consensus 239 ~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~ 316 (383)
++.+..|...++ | ++.+... .+.+..+.. .. ++.||-.+ ++-.+...+.. -...+.-+++.++|..|+..
T Consensus 94 ~~~l~ap~~~~d--~-y~~~l~wS~~n~lAvgl-d~--tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~lasg- 165 (420)
T 4gga_A 94 DRILDAPEIRND--Y-YLNLVDWSSGNVLAVAL-DN--SVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVG- 165 (420)
T ss_dssp SEEEECTTCCCC--T-TCBCEEECTTSEEEEEE-TT--EEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEE-
T ss_pred ceEEECCCCccc--c-cceeEEECCCCEEEEEe-CC--EEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEEEE-
Confidence 455566665533 2 2334433 333433333 33 89999988 76555555432 11346677888888877777
Q ss_pred ccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 317 FKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
..++.+..||+++++..
T Consensus 166 ---------s~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 166 ---------TSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp ---------ETTSCEEEEETTTTEEE
T ss_pred ---------ECCCeEEEEEcCCCcEE
Confidence 47788999999998866
No 134
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=56.99 E-value=89 Score=26.40 Aligned_cols=65 Identities=11% Similarity=0.209 Sum_probs=37.3
Q ss_pred CeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCC--CEEEEEeccCCCccccCCCcEEEEEeCC
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSE--DKVLVDKFKYGEEDDDINRWELYWYDPQ 337 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g--~~v~l~~~~~~~~~~~~~~~~~~~ydl~ 337 (383)
+++.+...... .+.||-++ ..|....++.. -.....-+.+++++ +..+... ..++.+..||++
T Consensus 170 ~~~l~sgs~D~--~v~lwd~~~~~~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~---------s~D~~v~iWd~~ 237 (297)
T 2pm7_B 170 SRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASV---------SQDRTCIIWTQD 237 (297)
T ss_dssp CCEEEEEETTS--CEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEE---------ETTSCEEEEEES
T ss_pred cceEEEEcCCC--cEEEEEEcCCCceEEEEEEecC-CCCceEEEEECCCCCCceEEEEE---------ECCCcEEEEEeC
Confidence 34555554444 89999987 44666555542 01234556666654 3334431 356678888877
Q ss_pred CC
Q 016752 338 SQ 339 (383)
Q Consensus 338 ~~ 339 (383)
+.
T Consensus 238 ~~ 239 (297)
T 2pm7_B 238 NE 239 (297)
T ss_dssp ST
T ss_pred CC
Confidence 64
No 135
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=56.46 E-value=93 Score=26.47 Aligned_cols=199 Identities=9% Similarity=0.049 Sum_probs=93.6
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
|+........++.++| +++...+..+. ....++.+|+.. +++.... ....+.+|+.. ++.+
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~--------~~~~gl~~d~dG---~l~v~~~------~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDAT--------AFTNGNAVDAQQ---RLVHCEH------GRRAITRSDAD-GQAH 119 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESC--------SCEEEEEECTTS---CEEEEET------TTTEEEEECTT-SCEE
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCC--------CccceeeECCCC---CEEEEEC------CCCEEEEECCC-CCEE
Confidence 4554445567888888 66554443221 123356777643 2333221 12456667764 5555
Q ss_pred EeccCCCeeeecCCccee--eCceEEEEEe---cC--------CCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeE
Q 016752 191 RIRVDFPYYILHGWDGTF--ADGHVHWLVT---NN--------PKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMF 257 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~--~~G~lywl~~---~~--------~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~ 257 (383)
.+...........-..+. -+|.+|+... .. ........|..+|+.++++..+. . .. . ...
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~-~---p~g 192 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LD-H---PNG 192 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ES-S---EEE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CC-C---Ccc
Confidence 443111100000012222 2778776321 00 00011246999999888777653 1 11 0 112
Q ss_pred EEEE-CCe-EEEEEecCC---CCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEE
Q 016752 258 VGNF-SGC-LYFSCLCNY---PQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 258 L~~~-~G~-L~~~~~~~~---~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
++.. +|+ |+++..... ...+.+|.++ ........+.........-+.+..+|. |++. ....+
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~-----------~~~gv 260 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSS-----------SGTGV 260 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEEC-----------CSSEE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEe-----------cCCcE
Confidence 3333 455 665554320 1245555554 332222222110011122244556665 7777 34579
Q ss_pred EEEeCCCCeEEEEEEEe
Q 016752 332 YWYDPQSQKAADQVTIH 348 (383)
Q Consensus 332 ~~ydl~~~~~~~~v~~~ 348 (383)
..||++.+.+. .+...
T Consensus 261 ~~~~~~g~~~~-~~~~~ 276 (305)
T 3dr2_A 261 CVFDSDGQLLG-HIPTP 276 (305)
T ss_dssp EEECTTSCEEE-EEECS
T ss_pred EEECCCCCEEE-EEECC
Confidence 99999888887 76543
No 136
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=56.13 E-value=94 Score=26.40 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=48.9
Q ss_pred EEEEECCCceeeEecCCCcCCcCCeeeeEEEEEC-CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEE
Q 016752 229 IVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNFS-GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYS 306 (383)
Q Consensus 229 il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~-G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~ 306 (383)
+..+|+....-..+....... ......+.... +.+.+...... .+.+|-++ ..-. ..+.. -...+.-+++.
T Consensus 152 ~~~~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~s~~~d~--~i~i~d~~~~~~~--~~~~~-h~~~v~~~~~s 224 (340)
T 4aow_A 152 IKLWNTLGVCKYTVQDESHSE--WVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLK--TNHIG-HTGYLNTVTVS 224 (340)
T ss_dssp EEEECTTSCEEEEECSSSCSS--CEEEEEECSCSSSCEEEEEETTS--CEEEEETTTTEEE--EEECC-CSSCEEEEEEC
T ss_pred EEEEEeCCCceEEEEeccccC--cccceEEccCCCCcEEEEEcCCC--EEEEEECCCCcee--eEecC-CCCcEEEEEEC
Confidence 677777665544443332211 11011111112 23444444333 79999887 3222 22221 01234456667
Q ss_pred eCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 307 KSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 307 ~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++|..++.. ..++.+..||+.+.+..
T Consensus 225 ~~~~~l~s~----------s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 225 PDGSLCASG----------GKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp TTSSEEEEE----------ETTCEEEEEETTTTEEE
T ss_pred CCCCEEEEE----------eCCCeEEEEEeccCcee
Confidence 777765555 35677888888877655
No 137
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=55.60 E-value=98 Score=26.46 Aligned_cols=119 Identities=13% Similarity=0.152 Sum_probs=59.9
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCC--CCcEEEEEeCCce
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNY--PQPVDIWVLKGCW 286 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~--~~~l~iW~l~~~W 286 (383)
+|.+||...... .|..+|+.+.++..+..+.. .. -..+... +|+|++...... ...+.+|-.++..
T Consensus 55 ~g~l~~~~~~~~------~i~~~d~~~~~~~~~~~~~~---~~--~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 55 QGQLFLLDVFEG------NIFKINPETKEIKRPFVSHK---AN--PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp TSCEEEEETTTC------EEEEECTTTCCEEEEEECSS---SS--EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CCCEEEEECCCC------EEEEEeCCCCcEEEEeeCCC---CC--cceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 688888765432 49999999888776532111 11 1234443 678877765331 1134444333222
Q ss_pred eeeEEEc-CCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 287 TKAFSFH-RSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 287 ~~~~~i~-~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+ ..+. ........-+.+.++|. +++...... .......++.||+++++++ .+
T Consensus 124 ~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~---~~~~~~~l~~~~~~~~~~~-~~ 177 (333)
T 2dg1_A 124 LQ-DIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGY---STNPLGGVYYVSPDFRTVT-PI 177 (333)
T ss_dssp CE-EEECSSSSCCCEEEEEECTTSC-EEEEECCCB---TTBCCEEEEEECTTSCCEE-EE
T ss_pred EE-EEEccCccCCcccceEECCCCC-EEEEecccc---ccCCCceEEEEeCCCCEEE-Ee
Confidence 22 1122 11112334455666664 566531000 0001357999999887776 44
No 138
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=55.42 E-value=1.2e+02 Score=27.35 Aligned_cols=116 Identities=13% Similarity=0.154 Sum_probs=59.6
Q ss_pred ceeeCceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-
Q 016752 206 GTFADGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK- 283 (383)
Q Consensus 206 ~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~- 283 (383)
.+..+|.....+..+. .|..+|+.+.+. ..+..+.... . .+.-...++.+.+...... .+.||.++
T Consensus 324 ~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~--~--~v~~~~~~~~~l~s~~~dg--~v~iwd~~~ 391 (445)
T 2ovr_B 324 GMELKDNILVSGNADS------TVKIWDIKTGQCLQTLQGPNKHQ--S--AVTCLQFNKNFVITSSDDG--TVKLWDLKT 391 (445)
T ss_dssp EEEEETTEEEEEETTS------CEEEEETTTCCEEEEECSTTSCS--S--CEEEEEECSSEEEEEETTS--EEEEEETTT
T ss_pred EEEEeCCEEEEEeCCC------eEEEEECCCCcEEEEEccCCCCC--C--CEEEEEECCCEEEEEeCCC--eEEEEECCC
Confidence 3445565444444332 389999976543 4444433211 1 1222334666666665554 89999998
Q ss_pred CceeeeEEEcC--CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 284 GCWTKAFSFHR--SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 284 ~~W~~~~~i~~--~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
++......... .......-+.++++|..+.... .++ .....+..||.+.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~--~dg----~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 392 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS--RNG----TEETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC--SSS----SSCCEEEEEECCCC
T ss_pred CceeeeeeccccCCCCceEEEEEecCCEEEEEEcc--cCC----CCccEEEEEECCCC
Confidence 65443332111 1123455566666654444441 000 11335888888764
No 139
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.27 E-value=1e+02 Score=26.62 Aligned_cols=179 Identities=9% Similarity=-0.006 Sum_probs=87.8
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC---ce-EEecc
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN---SW-RRIRV 194 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~---~W-r~~~~ 194 (383)
..+.+.++.+++...+-+. .....++.+|+..+ +|+.... ....+..++..+. .- +.+-
T Consensus 10 ~~I~~i~~~~~~~~~~~~~--------~~~p~g~~~d~~~~--~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~- 72 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN--------LRNVVALDTEVASN--RIYWSDL------SQRMICSTQLDRAHGVSSYDTVI- 72 (316)
T ss_dssp SSEEEEETTSCCCEEEECS--------CSSEEEEEEETTTT--EEEEEET------TTTEEEEEEC--------CEEEE-
T ss_pred CeEEEEECCCcceEehhcC--------CCceEEEEEEeCCC--EEEEEEC------CCCcEEEEECCCCCCCcccEEEE-
Confidence 3567777777665443211 11234677886554 3433331 2345666666541 21 1111
Q ss_pred CCCeeeecCCccee---eCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEE
Q 016752 195 DFPYYILHGWDGTF---ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSC 269 (383)
Q Consensus 195 ~~p~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~ 269 (383)
. ..+ ....++. .+|.+||...... .|.++|+.......+-- .... . ...+++. +|.|++..
T Consensus 73 ~--~~~-~~p~glavd~~~~~ly~~d~~~~------~I~~~~~~g~~~~~~~~-~~~~-~---P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 73 S--RDI-QAPDGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLFR-ENGS-K---PRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp C--SSC-SCCCEEEEETTTTEEEEEETTTT------EEEEEETTSSSEEEEEE-CTTC-C---EEEEEEETTTTEEEEEE
T ss_pred e--CCC-CCcCEEEEeecCCeEEEEECCCC------EEEEEeCCCCceEEEEE-CCCC-C---cceEEeCCCCCEEEEEc
Confidence 1 000 1113444 3689999865432 49999998655443321 1111 1 1234443 67788776
Q ss_pred ecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEE--EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 270 LCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALA--YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 270 ~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~--~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.... ..+....++++-.+.. +.. ....|.+ +..+++.||+.+ .....+..+|+.+...+
T Consensus 139 ~~~~-~~I~~~~~dG~~~~~~-~~~---~~~~P~gla~d~~~~~lY~~D---------~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 139 WGTP-AKIKKGGLNGVDIYSL-VTE---NIQWPNGITLDLLSGRLYWVD---------SKLHSISSIDVNGGNRK 199 (316)
T ss_dssp CSSS-CEEEEEETTSCCEEEE-ECS---SCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCE
T ss_pred cCCC-CeEEEEcCCCCCeEEE-EEC---CCCCceEEEEeccCCEEEEEE---------CCCCeEEEEecCCCceE
Confidence 4321 1333333444433221 111 1223444 444578888884 35668999998876655
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=54.64 E-value=1e+02 Score=26.31 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=55.6
Q ss_pred EEEEECCCceeeEecCCCcCCcCCeeeeEEEE-E-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEE
Q 016752 229 IVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN-F-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAY 305 (383)
Q Consensus 229 il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~ 305 (383)
++.+|..+.+...+.+.... .. ...+.. - +|+..++. .. .+.+|-++ ++- ...+.. +....-+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~sp~dg~~l~~~--~~--~v~~~d~~~~~~--~~~~~~--~~~~~~~~~ 302 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLT--EL--YFTGLRSPKDPNQIYGV--LN--RLAKYDLKQRKL--IKAANL--DHTYYCVAF 302 (349)
T ss_dssp EEEEETTTCCEEEEEEEECS--SC--EEEEEECSSCTTEEEEE--ES--EEEEEETTTTEE--EEEEEC--SSCCCEEEE
T ss_pred EEEEeccCCcEEecccccCC--Cc--ceeeEecCCCCCEEEEE--cC--eEEEEECccCeE--EEEEcC--CCCccceEE
Confidence 45577777776665442211 11 112222 2 55544444 22 67777776 332 233332 122335677
Q ss_pred EeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEec
Q 016752 306 SKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHG 349 (383)
Q Consensus 306 ~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~ 349 (383)
+++|+.|++. ..+..+..||+++.+....+...|
T Consensus 303 s~dg~~l~~~----------~~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 303 DKKGDKLYLG----------GTFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp CSSSSCEEEE----------SBSSEEEEEETTTTEEEEEEECSS
T ss_pred CCCCCEEEEe----------cCCCeEEEEeccccceeeeeecCC
Confidence 7888888886 356789999999987664655543
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=54.61 E-value=81 Score=26.95 Aligned_cols=72 Identities=7% Similarity=-0.084 Sum_probs=43.7
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
++.+++...... .+.+|-++ +...+...++.. ....-++++++|+.+++.. ..+..+..||+++++
T Consensus 10 ~~~~~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~---------~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYPN--NLHVVDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLN---------NHYGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETTT--EEEEEETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEE---------TTTTEEEEEETTTTE
T ss_pred CCEEEEEeCCCC--eEEEEECCCCcEEEEEecCCC--CCCceeEECCCCCEEEEEe---------CCCCcEEEEeCCCCc
Confidence 455655555444 77788776 543333332210 1234566778888777773 356789999999988
Q ss_pred EEEEEE
Q 016752 341 AADQVT 346 (383)
Q Consensus 341 ~~~~v~ 346 (383)
....+.
T Consensus 77 ~~~~~~ 82 (349)
T 1jmx_B 77 NTFHAN 82 (349)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 763443
No 142
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=54.60 E-value=1.1e+02 Score=26.67 Aligned_cols=178 Identities=12% Similarity=0.018 Sum_probs=91.7
Q ss_pred EEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCc
Q 016752 150 DGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIE 226 (383)
Q Consensus 150 ~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~ 226 (383)
.++++|+..+ +++.... ....+++++.....=+.+. .- . .....++.+ +|.|||..... .
T Consensus 82 ~glavd~~~g--~ly~~d~------~~~~I~~~~~dG~~~~~l~-~~--~-~~~P~giavdp~~g~ly~td~~~-----~ 144 (318)
T 3sov_A 82 DGLACDWLGE--KLYWTDS------ETNRIEVSNLDGSLRKVLF-WQ--E-LDQPRAIALDPSSGFMYWTDWGE-----V 144 (318)
T ss_dssp CEEEEETTTT--EEEEEET------TTTEEEEEETTSCSCEEEE-CS--S-CSSEEEEEEEGGGTEEEEEECSS-----S
T ss_pred cEEEEEcCCC--eEEEEEC------CCCEEEEEECCCCcEEEEE-eC--C-CCCccEEEEeCCCCEEEEEecCC-----C
Confidence 3577776544 2333221 2356777777654322221 10 0 011134444 58999986432 1
Q ss_pred cEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEE
Q 016752 227 NLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 227 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~ 304 (383)
..|..+|+....-..+-. .... . ..-|+.. +|+|+++..... .+...-++++-.+. +.. +....|.+
T Consensus 145 ~~I~r~~~dG~~~~~~~~-~~l~-~---Pnglavd~~~~~lY~aD~~~~--~I~~~d~dG~~~~~--~~~--~~~~~P~g 213 (318)
T 3sov_A 145 PKIERAGMDGSSRFIIIN-SEIY-W---PNGLTLDYEEQKLYWADAKLN--FIHKSNLDGTNRQA--VVK--GSLPHPFA 213 (318)
T ss_dssp CEEEEEETTSCSCEEEEC-SSCS-C---EEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEE--EEC--SCCSCEEE
T ss_pred CEEEEEEcCCCCeEEEEE-CCCC-C---ccEEEEeccCCEEEEEECCCC--EEEEEcCCCCceEE--Eec--CCCCCceE
Confidence 359999987544333311 1111 1 1234554 688888875433 44444444422222 211 12345777
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEeccCCCeeeEEEEEccccc
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGVPQGCRDTLVCVDSLVS 366 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~~~~~~~~~~y~~sl~~ 366 (383)
+.-+++.+|... .....+..+|..+++....+. .+...- +.+.+|.++..+
T Consensus 214 lav~~~~lywtd---------~~~~~V~~~~~~~G~~~~~i~-~~~~~P-~~i~v~~~~~q~ 264 (318)
T 3sov_A 214 LTLFEDILYWTD---------WSTHSILACNKYTGEGLREIH-SDIFSP-MDIHAFSQQRQP 264 (318)
T ss_dssp EEEETTEEEEEE---------TTTTEEEEEETTTCCSCEEEE-CCCSSC-CCEEEECGGGSC
T ss_pred EEEeCCEEEEEe---------cCCCeEEEEECCCCCceEEEe-CCCCCC-cEEEEecccccc
Confidence 765667888884 567799999997665441442 232222 456777766543
No 143
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=54.42 E-value=1e+02 Score=26.34 Aligned_cols=113 Identities=8% Similarity=0.009 Sum_probs=68.8
Q ss_pred eeCceEEEEEecCCCCCCccEEEEEECCCce-eeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-Cc
Q 016752 208 FADGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GC 285 (383)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~ 285 (383)
..++.+|-+..... .+.+||..+.+ -..|+.+.. ++ .|+..+++|++... . =.|++++ ..
T Consensus 103 ~~g~~Ly~ltw~~~------~v~V~D~~Tl~~~~ti~~~~e----Gw---GLt~Dg~~L~vSdG-s----~~l~~iDp~T 164 (268)
T 3nok_A 103 SDGERLYQLTWTEG------LLFTWSGMPPQRERTTRYSGE----GW---GLCYWNGKLVRSDG-G----TMLTFHEPDG 164 (268)
T ss_dssp ECSSCEEEEESSSC------EEEEEETTTTEEEEEEECSSC----CC---CEEEETTEEEEECS-S----SEEEEECTTT
T ss_pred EeCCEEEEEEccCC------EEEEEECCcCcEEEEEeCCCc----ee---EEecCCCEEEEECC-C----CEEEEEcCCC
Confidence 34568888764433 59999998754 456776532 23 35555677777652 2 2688888 44
Q ss_pred eeeeEEEcCC-CC-c--eeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEec
Q 016752 286 WTKAFSFHRS-VG-D--YVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHG 349 (383)
Q Consensus 286 W~~~~~i~~~-~~-~--~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~ 349 (383)
=....+|... -+ . ...-+.+ .+ +.||... .....+...|++|+++...+...+
T Consensus 165 ~~v~~~I~V~~~g~~v~~lNeLe~-~d-G~lyanv---------w~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 165 FALVGAVQVKLRGQPVELINELEC-AN-GVIYANI---------WHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp CCEEEEEECEETTEECCCEEEEEE-ET-TEEEEEE---------TTCSEEEEECTTTCBEEEEEECHH
T ss_pred CeEEEEEEeCCCCcccccccccEE-eC-CEEEEEE---------CCCCeEEEEeCCCCcEEEEEECCC
Confidence 4555566541 11 1 1111222 24 4788874 356799999999999885666543
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=54.36 E-value=1.6e+02 Score=28.63 Aligned_cols=193 Identities=9% Similarity=0.055 Sum_probs=96.6
Q ss_pred cEEEEcCCc-cceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 120 GIAFWNPST-KEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 120 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
.++++|..| ++...+...... ......+.+ |. +++-++.... .......+.+++..++..+.+. ....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~-pD-g~~l~~~~~~---~~~~~~~i~~~d~~~g~~~~~~-~~~~ 332 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ-----DIYLARVNW-RD-PQHLSFQRQS---RDQKKLDLVEVTLASNQQRVLA-HETS 332 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS-----SEEEEEEEE-EE-TTEEEEEEEE---TTSSEEEEEEEETTTCCEEEEE-EEEC
T ss_pred EEEEEECCCCCceEEecCCCCc-----ceEEEEEEe-CC-CCEEEEEEec---ccCCeEEEEEEECCCCceEEEE-EcCC
Confidence 688999999 887666543111 223334556 53 3343333321 1223567788888888766543 1110
Q ss_pred ee---ecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEE-EEE-CCe-EEEEEecC
Q 016752 199 YI---LHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFV-GNF-SGC-LYFSCLCN 272 (383)
Q Consensus 199 ~~---~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L-~~~-~G~-L~~~~~~~ 272 (383)
.. ........-+|.+++...... ...|..+|+... ...+ .... ... ..+ ... +|+ |++.....
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l--~~~~--~~v--~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAAL--THGN--WSV--DELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEES--CCSS--SCE--EEEEEEETTTTEEEEEECSS
T ss_pred CCcCCcCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeee--eecc--eEE--EeEeEEeCCCCEEEEEEeCC
Confidence 00 000111223788777664432 345888887666 4333 2221 111 122 222 554 55555443
Q ss_pred CCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 273 YPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 273 ~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
....+.||.++..=.....+.. ......+.++++|+.+.+..... .....++.+|..++.++
T Consensus 402 ~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~~------~~p~~~~l~~~~~~~~~ 463 (741)
T 2ecf_A 402 SARESQIYAVPLQGGQPQRLSK--APGMHSASFARNASVYVDSWSNN------STPPQIELFRANGEKIA 463 (741)
T ss_dssp CTTCBEEEEEETTCCCCEECCC--SCSEEEEEECTTSSEEEEEEEET------TEEEEEEEEETTSCEEE
T ss_pred CCceEEEEEEEcCCCCeeeccc--CCCceEEEECCCCCEEEEEecCC------CCCCeEEEEEcCCCeEE
Confidence 3337889998711022233332 12234667778888777662100 11246788887766554
No 145
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=54.05 E-value=1.2e+02 Score=26.84 Aligned_cols=67 Identities=15% Similarity=0.187 Sum_probs=43.5
Q ss_pred CCeEEEEEecCC------CCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEE
Q 016752 262 SGCLYFSCLCNY------PQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWY 334 (383)
Q Consensus 262 ~G~L~~~~~~~~------~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~y 334 (383)
+++|++...... ...-.||+.+ .....+.+++. +. ..-++++++|+.+|.. .. ..+..|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~-p~~ia~spdg~~l~v~----------n~-~~v~v~ 330 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD-ALSMTIDQQRNLMLTL----------DG-GNVNVY 330 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT-CCEEEEETTTTEEEEE----------CS-SCEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC-eeEEEECCCCCEEEEe----------CC-CeEEEE
Confidence 366776654111 0134667766 55566677764 34 5667788899988877 23 789999
Q ss_pred eCCCCeEE
Q 016752 335 DPQSQKAA 342 (383)
Q Consensus 335 dl~~~~~~ 342 (383)
|+++++++
T Consensus 331 D~~t~~l~ 338 (361)
T 2oiz_A 331 DISQPEPK 338 (361)
T ss_dssp ECSSSSCE
T ss_pred ECCCCcce
Confidence 99999444
No 146
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=53.39 E-value=28 Score=25.82 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=28.3
Q ss_pred CcEEEEcCCcc-ceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEE
Q 016752 119 NGIAFWNPSTK-EHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLV 167 (383)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 167 (383)
..+++.||.|+ .|...-.. ...+.+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~---------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH---------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS---------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC---------ceEEEEEEcCCCCEEEEEEcc
Confidence 36899999996 88543222 134567788888889999865
No 147
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=53.19 E-value=1e+02 Score=25.91 Aligned_cols=146 Identities=14% Similarity=0.029 Sum_probs=84.4
Q ss_pred cccEEEEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce-eeEecCCCcCCcCCe
Q 016752 175 EYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVPLPHLEDKKNV 253 (383)
Q Consensus 175 ~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~ 253 (383)
....+.+++..++.=.... .++... ....-...++.+|-+..... .+.+||..+-+ -..++.|.. ++
T Consensus 41 g~S~v~~vD~~tgkv~~~~-~l~~~~-fgeGi~~~~~~ly~ltw~~~------~v~v~D~~tl~~~~ti~~~~~----Gw 108 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRA-EVPPPY-FGAGIVAWRDRLIQLTWRNH------EGFVYDLATLTPRARFRYPGE----GW 108 (243)
T ss_dssp TSCEEEEEETTTCCEEEEE-ECCTTC-CEEEEEEETTEEEEEESSSS------EEEEEETTTTEEEEEEECSSC----CC
T ss_pred CCceEEEEECCCCCEEEEE-eCCCCc-ceeEEEEeCCEEEEEEeeCC------EEEEEECCcCcEEEEEeCCCC----ce
Confidence 3568889999987532221 222211 01112345779998875443 59999998754 456776642 33
Q ss_pred eeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC-CC-ceeEEEEEEeCCCEEEEEeccCCCccccCCCcE
Q 016752 254 LVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS-VG-DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWE 330 (383)
Q Consensus 254 ~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~-~~-~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~ 330 (383)
.|+..+++|++... .. .|++++ ..=....+|... -+ ....+..+.-.++.||... .....
T Consensus 109 ---glt~dg~~L~vSdg-s~----~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanv---------w~s~~ 171 (243)
T 3mbr_X 109 ---ALTSDDSHLYMSDG-TA----VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANV---------WLTSR 171 (243)
T ss_dssp ---EEEECSSCEEEECS-SS----EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE---------TTTTE
T ss_pred ---EEeeCCCEEEEECC-CC----eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEE---------CCCCe
Confidence 45555677887653 22 578888 544555666541 11 0011111111235688774 35668
Q ss_pred EEEEeCCCCeEEEEEEEec
Q 016752 331 LYWYDPQSQKAADQVTIHG 349 (383)
Q Consensus 331 ~~~ydl~~~~~~~~v~~~~ 349 (383)
+...|++|+++...+...+
T Consensus 172 I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp EEEECTTTCBEEEEEECGG
T ss_pred EEEEECCCCCEEEEEECCc
Confidence 9999999999885666554
No 148
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=53.15 E-value=1.1e+02 Score=26.19 Aligned_cols=68 Identities=15% Similarity=0.212 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCcEEEEEeC----CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC-C
Q 016752 264 CLYFSCLCNYPQPVDIWVLK----GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ-S 338 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~----~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~-~ 338 (383)
.+.+...... ++.||.++ ..|.....-.. .....-++++++|..|... ..++.+..|+.. .
T Consensus 229 ~~las~s~D~--~v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~----------~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 229 STIASCSQDG--RVFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVS----------GGDNKVTLWKESVD 294 (316)
T ss_dssp CEEEEEETTC--EEEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEE----------ESSSCEEEEEECTT
T ss_pred ceEEEEcCCC--eEEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEE----------cCCCeEEEEEECCC
Confidence 4555555444 89999987 34543221111 2335567777888766665 367788888875 4
Q ss_pred CeEEEEEE
Q 016752 339 QKAADQVT 346 (383)
Q Consensus 339 ~~~~~~v~ 346 (383)
++++ .+.
T Consensus 295 g~~~-~~~ 301 (316)
T 3bg1_A 295 GQWV-CIS 301 (316)
T ss_dssp SCEE-EEE
T ss_pred CcEE-Eee
Confidence 5666 553
No 149
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=53.10 E-value=1.7e+02 Score=28.42 Aligned_cols=181 Identities=12% Similarity=0.126 Sum_probs=84.8
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCC
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDF 196 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~ 196 (383)
.+..+.|||..++....+......+ ......+.+.+....-.++... ....+.+|+..++.-...-...
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~s-------~d~~v~vwd~~~~~~~~~~~~h 560 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEGH----RDWVSCVRFSPNTLQPTIVSAS-------WDKTVKVWNLSNCKLRSTLAGH 560 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTSC----SSCEEEEEECSCSSSCEEEEEE-------TTSCEEEEETTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCcceeeccCCCCC----CCcEEEEEEeCCCCcceEEEEe-------CCCeEEEEECCCCcEEEEEcCC
Confidence 4456788887655444443322111 1233345666544332333332 2345788888775432211010
Q ss_pred CeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCC
Q 016752 197 PYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNY 273 (383)
Q Consensus 197 p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~ 273 (383)
.... ..+.+ +|.+...+..+. .|..+|+.+.+-.. .+... .. -..+... +|.+... ....
T Consensus 561 ~~~v----~~v~~spdg~~l~sg~~Dg------~i~iwd~~~~~~~~-~~~~~----~~-v~~~~~sp~~~~l~~-~~~~ 623 (694)
T 3dm0_A 561 TGYV----STVAVSPDGSLCASGGKDG------VVLLWDLAEGKKLY-SLEAN----SV-IHALCFSPNRYWLCA-ATEH 623 (694)
T ss_dssp SSCE----EEEEECTTSSEEEEEETTS------BCEEEETTTTEEEE-CCBCS----SC-EEEEEECSSSSEEEE-EETT
T ss_pred CCCE----EEEEEeCCCCEEEEEeCCC------eEEEEECCCCceEE-EecCC----Cc-EEEEEEcCCCcEEEE-EcCC
Confidence 0000 12222 455444433332 38888987765322 11111 11 1123333 3444333 3333
Q ss_pred CCcEEEEEeC-CceeeeEEEcCCC--------C--------ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeC
Q 016752 274 PQPVDIWVLK-GCWTKAFSFHRSV--------G--------DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDP 336 (383)
Q Consensus 274 ~~~l~iW~l~-~~W~~~~~i~~~~--------~--------~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl 336 (383)
.+.||-++ ++=.......... + ..+.-+.++++|..|+-. ..++.+..||+
T Consensus 624 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sg----------s~Dg~i~iW~i 691 (694)
T 3dm0_A 624 --GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSG----------YTDGVIRVWGI 691 (694)
T ss_dssp --EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEE----------ETTSEEEEEEC
T ss_pred --CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEE----------cCCCeEEEEec
Confidence 69999887 3322222211100 0 123456677888877666 46788999987
Q ss_pred C
Q 016752 337 Q 337 (383)
Q Consensus 337 ~ 337 (383)
.
T Consensus 692 ~ 692 (694)
T 3dm0_A 692 G 692 (694)
T ss_dssp -
T ss_pred c
Confidence 5
No 150
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=52.83 E-value=1.3e+02 Score=26.98 Aligned_cols=186 Identities=10% Similarity=0.050 Sum_probs=96.1
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
.+.|++... ..+...++.+++...+-.. .....++.+|+..+ +|+.... ....+..++..+..
T Consensus 87 ~~~l~~~~~-~~I~~i~~~~~~~~~~~~~--------~~~~~gl~~d~~~~--~ly~~D~------~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 87 EPVLLFANR-IDIRQVLPHRSEYTLLLNN--------LENAIALDFHHRRE--LVFWSDV------TLDRILRANLNGSN 149 (386)
T ss_dssp CCEEEEECB-SCEEEECTTSCCCEEEECS--------CSCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCC
T ss_pred cceeEeecC-ccceeeccCCCcEEEEecC--------CCccEEEEEecCCC--eEEEEeC------CCCcEEEEecCCCC
Confidence 555555543 3577777766655443221 12345788887554 3333321 23456667776665
Q ss_pred eEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CC
Q 016752 189 WRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SG 263 (383)
Q Consensus 189 Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G 263 (383)
.+.+. .... ....++.+ +|.|||...... .|.++|+....-..+. ..... . ...+++. +|
T Consensus 150 ~~~~~-~~~~---~~p~glavd~~~g~lY~~d~~~~------~I~~~~~dg~~~~~l~-~~~l~-~---P~giavdp~~g 214 (386)
T 3v65_B 150 VEEVV-STGL---ESPGGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSLE-K---PRAIALHPMEG 214 (386)
T ss_dssp EEEEE-CSSC---SCCCCEEEETTTTEEEEEETTTT------EEEECBTTSCSCEEEE-CSSCS-C---EEEEEEETTTT
T ss_pred cEEEE-eCCC---CCccEEEEEeCCCeEEEEcCCCC------eEEEEeCCCCceEEee-cCCCC-C---CcEEEEEcCCC
Confidence 44432 1110 11134443 689999875433 5889998765433332 11111 1 1234444 67
Q ss_pred eEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEE--EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 264 CLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALA--YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~--~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
.|++..... .-.|+..+ ++-.+.. +.. ....|.| +..+++.||+.+ .....|..+|+...
T Consensus 215 ~ly~td~~~---~~~I~r~~~dG~~~~~~-~~~---~~~~PnGlavd~~~~~lY~aD---------~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 215 TIYWTDWGN---TPRIEASSMDGSGRRII-ADT---HLFWPNGLTIDYAGRRMYWVD---------AKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEECSS---SCEEEEEETTSCSCEEE-ECS---SCSCEEEEEEEGGGTEEEEEE---------TTTTEEEEECTTSC
T ss_pred eEEEeccCC---CCEEEEEeCCCCCcEEE-EEC---CCCCeeeEEEeCCCCEEEEEE---------CCCCEEEEEeCCCC
Confidence 788776433 12455544 4322221 111 1123444 444567888884 45668888888765
Q ss_pred eEE
Q 016752 340 KAA 342 (383)
Q Consensus 340 ~~~ 342 (383)
..+
T Consensus 279 ~~~ 281 (386)
T 3v65_B 279 HRK 281 (386)
T ss_dssp SCE
T ss_pred eeE
Confidence 544
No 151
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=52.38 E-value=1.3e+02 Score=27.03 Aligned_cols=97 Identities=9% Similarity=0.028 Sum_probs=51.5
Q ss_pred EEEEECCCceee-EecCCCcCCcCCeeeeEEEE--ECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEE
Q 016752 229 IVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGN--FSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 229 il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 304 (383)
|..+|+.+.... .+.+..+.... ..|.. .+|.+.+....+. ++.||-++ +.-. ...-..........+.
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V----~~l~f~p~~~~~l~s~s~D~--~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSI----TGLKFNPLNTNQFYASSMEG--TTRLQDFKGNILR-VFASSDTINIWFCSLD 216 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCC----CEEEECSSCTTEEEEECSSS--CEEEEETTSCEEE-EEECCSSCSCCCCCEE
T ss_pred EEEEECCCCCceeEEEccCCCCCE----EEEEEeCCCCCEEEEEeCCC--EEEEeeccCCcee-EEeccCCCCccEEEEE
Confidence 777787655432 23332222111 12333 3566666555444 89999887 3211 1111111112233456
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.++|..|+.. ..++.+..||++++.+.
T Consensus 217 ~~~~~~~l~~g----------~~dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 217 VSASSRMVVTG----------DNVGNVILLNMDGKELW 244 (435)
T ss_dssp EETTTTEEEEE----------CSSSBEEEEESSSCBCC
T ss_pred ECCCCCEEEEE----------eCCCcEeeeccCcceeE
Confidence 67777766666 46678888998877665
No 152
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=51.99 E-value=1.8e+02 Score=28.45 Aligned_cols=122 Identities=11% Similarity=0.036 Sum_probs=61.4
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCc----cceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDK----VHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~----~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+|.|.+......++-.|+.|++.+.--......... ......+..++. + +|+... ....+..++.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~---~-~v~v~~-------~dg~l~alD~ 145 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK---G-KVYVGA-------WDGRLIALDA 145 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET---T-EEEEEC-------TTSEEEEEET
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC---C-EEEEEc-------CCCEEEEEEC
Confidence 777776655567888899998765322111110000 000001122221 1 333321 1345666777
Q ss_pred CCC--ceEEecc-CCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEe
Q 016752 185 RSN--SWRRIRV-DFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEV 242 (383)
Q Consensus 185 ~~~--~Wr~~~~-~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i 242 (383)
.++ .|+.... ..+........++..+|.+|.-....+ ......|.+||..+.+ |+.-
T Consensus 146 ~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 146 ATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEec
Confidence 766 5886541 111111223367788999987654221 1123469999997654 6554
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=51.83 E-value=1.2e+02 Score=26.23 Aligned_cols=197 Identities=12% Similarity=0.044 Sum_probs=96.4
Q ss_pred eeeeCcCeeEEEecCCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecC-CCCEEEEEEEEEeecCCcccEEE
Q 016752 103 PIIDSCNGLIALKNDENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAV-NDDYKVFRLVQFVRENVEYTEVS 180 (383)
Q Consensus 103 ~~~~s~~GLll~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~-~~~ykVv~~~~~~~~~~~~~~~~ 180 (383)
.+.++.+|.+.+-.......++|..+++.. .+.... ......+.++|. .+.+- +... ....+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l-~s~s-------~dg~i~ 152 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-------ANEIIYMYGHNEVNTEYF-IWAD-------NRGTIG 152 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-------SSCEEEEECCC---CCEE-EEEE-------TTCCEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-------CCCEEEEEcCCCCCCCEE-EEEe-------CCCcEE
Confidence 455667787777666667778888887733 222111 112345666662 23332 2222 234678
Q ss_pred EEEcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceee--EecCCCcCCcCCeeee
Q 016752 181 VYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ--EVPLPHLEDKKNVLVM 256 (383)
Q Consensus 181 vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~--~i~~P~~~~~~~~~~~ 256 (383)
+|+.+++.-.... ..... ..-..+.+ +|.+...+..+. .|..+|+.+..-. .+... +. .. -.
T Consensus 153 ~wd~~~~~~~~~~-~~~~~--~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~~-h~---~~-v~ 218 (343)
T 3lrv_A 153 FQSYEDDSQYIVH-SAKSD--VEYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPVD-EE---AK-IK 218 (343)
T ss_dssp EEESSSSCEEEEE-CCCSS--CCCCEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCCC-TT---SC-EE
T ss_pred EEECCCCcEEEEE-ecCCC--CceEEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEecc-CC---CC-EE
Confidence 8888876542221 11100 00012222 555544443332 3899999876543 23220 11 11 11
Q ss_pred EEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcC----CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcE
Q 016752 257 FVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHR----SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWE 330 (383)
Q Consensus 257 ~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~----~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~ 330 (383)
.+... +|...+... .. .+.||-+. ..= ..++.. ........+++.++|..++... ..+..
T Consensus 219 ~l~fs~~g~~l~s~~-~~--~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s---------~~d~~ 284 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC-DQ--TVVCFDLRKDVG--TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS---------NESNS 284 (343)
T ss_dssp EEEECTTSSEEEEEE-SS--BEEEEETTSSTT--CBSSCCCBC-----CCEEEEECTTSSEEEEEE---------TTTTE
T ss_pred EEEEeCCCCEEEEEe-CC--eEEEEEcCCCCc--ceeecccccccccccceEEEECCCCCEEEEec---------CCCCc
Confidence 23333 465555554 44 89999988 211 111111 0000003467778888777652 12667
Q ss_pred EEEEeC--CCCeEE
Q 016752 331 LYWYDP--QSQKAA 342 (383)
Q Consensus 331 ~~~ydl--~~~~~~ 342 (383)
+..|+. .++.++
T Consensus 285 i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 285 LTIYKFDKKTKNWT 298 (343)
T ss_dssp EEEEEECTTTCSEE
T ss_pred EEEEEEcccccceE
Confidence 777777 445566
No 154
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=51.27 E-value=1.2e+02 Score=25.99 Aligned_cols=207 Identities=10% Similarity=-0.029 Sum_probs=99.6
Q ss_pred cCeeEEEe-cCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 108 CNGLIALK-NDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 108 ~~GLll~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
.+|-|.+. .....++++||.+++...+..... ....++.+++.. +++.... ........+.+|+..+
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~~~i~~~~dg---~l~v~~~--~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK-------ANPAAIKIHKDG---RLFVCYL--GDFKSTGGIFAATENG 121 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS-------SSEEEEEECTTS---CEEEEEC--TTSSSCCEEEEECTTS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC-------CCcceEEECCCC---cEEEEeC--CCCCCCceEEEEeCCC
Confidence 45555543 345679999999998776532111 123356667543 2222221 0000123677788777
Q ss_pred CceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CC
Q 016752 187 NSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SG 263 (383)
Q Consensus 187 ~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G 263 (383)
+.-+......... .....+.+ +|.+|..............|..+|..++++..+.- ... . ...++.. +|
T Consensus 122 ~~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~--~--~~~i~~~~dg 193 (333)
T 2dg1_A 122 DNLQDIIEDLSTA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS--V--ANGIALSTDE 193 (333)
T ss_dssp CSCEEEECSSSSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES--S--EEEEEECTTS
T ss_pred CEEEEEEccCccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC--c--ccceEECCCC
Confidence 6554221011100 00012222 67776654321101112358899988766654421 100 0 1123332 45
Q ss_pred e-EEEEEecCCCCcEEEEEeC--C-ceeee-EEEcCCCC--ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeC
Q 016752 264 C-LYFSCLCNYPQPVDIWVLK--G-CWTKA-FSFHRSVG--DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDP 336 (383)
Q Consensus 264 ~-L~~~~~~~~~~~l~iW~l~--~-~W~~~-~~i~~~~~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl 336 (383)
+ |++...... .+.+|.++ + ..... ..+...+. ....-+++.++|. +++.. ..+..+..||+
T Consensus 194 ~~l~v~~~~~~--~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~---------~~~~~v~~~d~ 261 (333)
T 2dg1_A 194 KVLWVTETTAN--RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAM---------YGQGRVLVFNK 261 (333)
T ss_dssp SEEEEEEGGGT--EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEE---------ETTTEEEEECT
T ss_pred CEEEEEeCCCC--eEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEE---------cCCCEEEEECC
Confidence 4 665554333 67777774 2 22211 11111011 1333455556665 66663 24568999999
Q ss_pred CCCeEEEEEEE
Q 016752 337 QSQKAADQVTI 347 (383)
Q Consensus 337 ~~~~~~~~v~~ 347 (383)
+++.++ .+..
T Consensus 262 ~g~~~~-~~~~ 271 (333)
T 2dg1_A 262 RGYPIG-QILI 271 (333)
T ss_dssp TSCEEE-EEEC
T ss_pred CCCEEE-EEEc
Confidence 877777 6644
No 155
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=50.74 E-value=1.5e+02 Score=27.14 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=60.7
Q ss_pred cceeeC-----ceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEE
Q 016752 205 DGTFAD-----GHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVD 278 (383)
Q Consensus 205 ~~v~~~-----G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~ 278 (383)
.++.++ |.|||..... .|..+|+.+.+...+..+.. . ...++.. +|.|++.........-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~-------~I~~id~~~g~v~~~~~~~~---~---P~giavd~dG~lyVad~~~~~~~~g 208 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRD-------AFRHVDFVNQYVDIKTTNIG---Q---CADVNFTLNGDMVVVDDQSSDTNTG 208 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTS-------CEEEEETTTTEEEEECCCCS---C---EEEEEECTTCCEEEEECCSCTTSEE
T ss_pred ceEEEccccCCCEEEEEeCCC-------CEEEEECCCCEEEEeecCCC---C---ccEEEECCCCCEEEEcCCCCcccce
Confidence 466666 8999976542 39999998888877643211 1 1134443 57777776532211233
Q ss_pred EEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 279 IWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 279 iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+..+. +.|.....+.. + ....-+++.++++.||+.. .....++.||+.++++
T Consensus 209 v~~~~~~~~~~~~~~~~~-~-~~P~giavd~~~G~lyv~d---------~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 209 IYLFTRASGFTERLSLCN-A-RGAKTCAVHPQNGKIYYTR---------YHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEECGGGTTCCEEEEEE-C-SSBCCCEECTTTCCEEECB---------TTCSEEEEECTTTCCE
T ss_pred EEEEECCCCeeccccccc-c-CCCCEEEEeCCCCeEEEEE---------CCCCEEEEEECCCCeE
Confidence 44444 44543222221 1 1112244445334577763 3455788888876666
No 156
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=50.72 E-value=1.2e+02 Score=25.95 Aligned_cols=190 Identities=7% Similarity=-0.082 Sum_probs=94.0
Q ss_pred CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCce-EEeccCC
Q 016752 118 ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSW-RRIRVDF 196 (383)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~W-r~~~~~~ 196 (383)
...++++|+.|++....-+.... ..++.+++..+ + ++.... ....+.+|+..++.- +.+....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~--------~~~~~~s~dg~-~-l~v~~~------~~~~v~~~d~~~~~~~~~~~~~~ 131 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK--------PFGATINNTTQ-T-LWFGNT------VNSAVTAIDAKTGEVKGRLVLDD 131 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC--------CCSEEEETTTT-E-EEEEET------TTTEEEEEETTTCCEEEEEESCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC--------cceEEECCCCC-E-EEEEec------CCCEEEEEeCCCCeeEEEEecCC
Confidence 34699999998876532211111 11355565433 3 222221 234788899887753 2222111
Q ss_pred Ceeee---cC-Ccceee--Cce-EEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-CCeEEE
Q 016752 197 PYYIL---HG-WDGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF-SGCLYF 267 (383)
Q Consensus 197 p~~~~---~~-~~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L~~ 267 (383)
..... .. ..++.+ +|. +|....... ..|..+|+.+.+.. .++.+... .. .+... +|+..+
T Consensus 132 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~---~~---~~~~s~dg~~l~ 200 (353)
T 3vgz_A 132 RKRTEEVRPLQPRELVADDATNTVYISGIGKE-----SVIWVVDGGNIKLKTAIQNTGKM---ST---GLALDSEGKRLY 200 (353)
T ss_dssp CCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-----CEEEEEETTTTEEEEEECCCCTT---CC---CCEEETTTTEEE
T ss_pred CccccccCCCCCceEEECCCCCEEEEEecCCC-----ceEEEEcCCCCceEEEecCCCCc---cc---eEEECCCCCEEE
Confidence 00000 00 022333 554 555442221 24999999877653 34422211 11 12222 455433
Q ss_pred EEecCCCCcEEEEEeCCceeeeEEEcC-CC--CceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEE
Q 016752 268 SCLCNYPQPVDIWVLKGCWTKAFSFHR-SV--GDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQ 344 (383)
Q Consensus 268 ~~~~~~~~~l~iW~l~~~W~~~~~i~~-~~--~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~ 344 (383)
+..... .+.+|-++ .......+.. .. .....-++++++|+.+++.. .....+..||+++++....
T Consensus 201 ~~~~~~--~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 201 TTNADG--ELITIDTA-DNKILSRKKLLDDGKEHFFINISLDTARQRAFITD---------SKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp EECTTS--EEEEEETT-TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE---------SSSSEEEEEETTTCCEEEE
T ss_pred EEcCCC--eEEEEECC-CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe---------CCCCEEEEEECCCCcEEEE
Confidence 433322 56666655 2223333332 11 12344467788888888873 3457899999998887634
Q ss_pred EE
Q 016752 345 VT 346 (383)
Q Consensus 345 v~ 346 (383)
+.
T Consensus 269 ~~ 270 (353)
T 3vgz_A 269 VA 270 (353)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 157
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=50.31 E-value=1.4e+02 Score=26.80 Aligned_cols=186 Identities=9% Similarity=0.037 Sum_probs=98.0
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCe
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPY 198 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~ 198 (383)
..+.++|..++..+.|.... .....+.+.|..+ +++... .......+.+++..++..+.+. ..+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~--------~~v~~~~~Spdg~--~la~~s----~~~~~~~i~~~d~~tg~~~~l~-~~~~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP--------QPLMSPAWSPDGS--KLAYVT----FESGRSALVIQTLANGAVRQVA-SFPR 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES--------SCEEEEEECTTSS--EEEEEE----CTTSSCEEEEEETTTCCEEEEE-CCSS
T ss_pred ceEEEEcCCCCCCEEEeCCC--------CcceeeEEcCCCC--EEEEEE----ecCCCcEEEEEECCCCcEEEee-cCCC
Confidence 57999998776655554321 1233456666433 233222 1112357889999988776554 2221
Q ss_pred eeecCCcceee--Cce-EEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCC
Q 016752 199 YILHGWDGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNY 273 (383)
Q Consensus 199 ~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~ 273 (383)
.. ..+.+ +|. +.+..... ....|..+|+.+.+...+..... . ...+... +|+ |++......
T Consensus 224 ~~----~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~~----~--~~~~~~spdg~~l~~~s~~~g 289 (415)
T 2hqs_A 224 HN----GAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGRS----N--NTEPTWFPDSQNLAFTSDQAG 289 (415)
T ss_dssp CE----EEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCSS----C--EEEEEECTTSSEEEEEECTTS
T ss_pred cc----cCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCCC----c--ccceEECCCCCEEEEEECCCC
Confidence 10 11222 565 55444332 12358999998877654432111 1 1122332 566 444443233
Q ss_pred CCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 274 PQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 274 ~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
...||.++ ..-. ...+.. -+....-+.++++|+.|++.... .....++.+|+++++.+ .+
T Consensus 290 --~~~i~~~d~~~~~-~~~l~~-~~~~~~~~~~spdG~~l~~~~~~-------~g~~~i~~~d~~~~~~~-~l 350 (415)
T 2hqs_A 290 --RPQVYKVNINGGA-PQRITW-EGSQNQDADVSSDGKFMVMVSSN-------GGQQHIAKQDLATGGVQ-VL 350 (415)
T ss_dssp --SCEEEEEETTSSC-CEECCC-SSSEEEEEEECTTSSEEEEEEEC-------SSCEEEEEEETTTCCEE-EC
T ss_pred --CcEEEEEECCCCC-EEEEec-CCCcccCeEECCCCCEEEEEECc-------CCceEEEEEECCCCCEE-Ee
Confidence 45677666 2111 222221 12334456777888888776310 12458999999999887 55
No 158
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=49.34 E-value=2e+02 Score=28.11 Aligned_cols=169 Identities=12% Similarity=0.154 Sum_probs=85.9
Q ss_pred EEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC--ceEEeccCCCeeeecCCccee-eCceEEEEEecCCCCCCcc
Q 016752 151 GFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN--SWRRIRVDFPYYILHGWDGTF-ADGHVHWLVTNNPKDDIEN 227 (383)
Q Consensus 151 ~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~--~Wr~~~~~~p~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~ 227 (383)
+..+.+ .++|.++.... ......+.+++..++ .|+.+....... ...+. -++.+|+++.... ...
T Consensus 238 ~~~~Sp-Dg~~l~~~~~~----~~~~~~i~~~d~~~~~~~~~~l~~~~~~~----~~~~~~~g~~l~~~t~~~~---~~~ 305 (693)
T 3iuj_A 238 GATVTE-DDRFLLISAAN----STSGNRLYVKDLSQENAPLLTVQGDLDAD----VSLVDNKGSTLYLLTNRDA---PNR 305 (693)
T ss_dssp EEEECT-TSCEEEEEEES----SSSCCEEEEEETTSTTCCCEEEECSSSSC----EEEEEEETTEEEEEECTTC---TTC
T ss_pred EEEEcC-CCCEEEEEEcc----CCCCcEEEEEECCCCCCceEEEeCCCCce----EEEEeccCCEEEEEECCCC---CCC
Confidence 344544 34455444331 112346778887665 787765111100 01232 3567888775432 234
Q ss_pred EEEEEECCCc---eeeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEE
Q 016752 228 LIVAFNLESE---EFQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 228 ~il~fD~~~e---~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~ 304 (383)
.|+..|+.+. .|+.+- |... .. . .+...++.|.+.........+.+|.+++.+.+ .+...-......+.
T Consensus 306 ~l~~~d~~~~~~~~~~~l~-~~~~---~~-~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~--~l~~p~~~~~~~~~ 377 (693)
T 3iuj_A 306 RLVTVDAANPGPAHWRDLI-PERQ---QV-L-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVR--EVALPGLGSVSGFN 377 (693)
T ss_dssp EEEEEETTSCCGGGCEEEE-CCCS---SC-E-EEEEETTEEEEEEEETTEEEEEEECTTSCEEE--EECCSSSSEEEECC
T ss_pred EEEEEeCCCCCccccEEEe-cCCC---CE-E-EEEEECCEEEEEEEECCeeEEEEEECCCCeeE--EeecCCCceEEeee
Confidence 6999999763 366542 2211 11 2 34445667777666555223444444455443 34321111222233
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEE
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVT 346 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~ 346 (383)
...+++.+++..... .....++.||+++++.+ .+.
T Consensus 378 ~~~d~~~l~~~~ss~------~tP~~l~~~d~~~g~~~-~l~ 412 (693)
T 3iuj_A 378 GKHDDPALYFGFENY------AQPPTLYRFEPKSGAIS-LYR 412 (693)
T ss_dssp CCTTCSCEEEEEECS------SSCCEEEEECTTTCCEE-EEE
T ss_pred cCCCCCEEEEEecCC------CCCCEEEEEECCCCeEE-EEE
Confidence 334667777762100 13468999999998877 553
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=49.30 E-value=1.7e+02 Score=27.48 Aligned_cols=194 Identities=11% Similarity=0.016 Sum_probs=98.0
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
+++++.........|+|..|++...|...+. ..+.++|.. ++-+.... . .. ....+.+++..++.
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----------~~~~~spDG-~~la~~~~-~-~~--~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLPG----------FGFVSDIRG-DLIAGLGF-F-GG--GRVSLFTSNLSSGG 186 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESS----------CEEEEEEET-TEEEEEEE-E-ET--TEEEEEEEETTTCC
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCCC----------ceEEECCCC-CEEEEEEE-c-CC--CCeEEEEEcCCCCC
Confidence 4566665555566799999998877754321 235555533 33322222 1 11 22457888888888
Q ss_pred eEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcC-CcCC-eeeeEEEE-ECCeE
Q 016752 189 WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLE-DKKN-VLVMFVGN-FSGCL 265 (383)
Q Consensus 189 Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~-~~~~-~~~~~L~~-~~G~L 265 (383)
++.+. ..+... ......=||...+..... ....|..+|+.+.+...+...... .... ........ -+|.+
T Consensus 187 ~~~l~-~~~~~~--~~~~~SpDG~~l~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 259 (582)
T 3o4h_A 187 LRVFD-SGEGSF--SSASISPGMKVTAGLETA----REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRL 259 (582)
T ss_dssp CEEEC-CSSCEE--EEEEECTTSCEEEEEECS----SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCE
T ss_pred ceEee-cCCCcc--ccceECCCCCEEEEccCC----CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcE
Confidence 88775 322111 001112267544433222 223599999998877732221111 0000 00000112 26777
Q ss_pred EEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 266 YFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++...... +..||.+ ++..+ . .......+.++ +|..++.... ......++.+|+++ +++
T Consensus 260 ~~~~~~~g--~~~l~~~-g~~~~-----~-~~~~v~~~~~s-dg~~l~~~s~-------~~~p~~l~~~d~~~-~~~ 318 (582)
T 3o4h_A 260 AVVARREG--RSAVFID-GERVE-----A-PQGNHGRVVLW-RGKLVTSHTS-------LSTPPRIVSLPSGE-PLL 318 (582)
T ss_dssp EEEEEETT--EEEEEET-TEEEC-----C-CSSEEEEEEEE-TTEEEEEEEE-------TTEEEEEEEETTCC-EEE
T ss_pred EEEEEcCC--cEEEEEE-CCeec-----c-CCCceEEEEec-CCEEEEEEcC-------CCCCCeEEEEcCCC-ceE
Confidence 76666555 7999998 44332 1 11233455666 6655444320 01234688888876 444
No 160
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=49.29 E-value=1.1e+02 Score=25.09 Aligned_cols=188 Identities=10% Similarity=0.050 Sum_probs=95.2
Q ss_pred CCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC-CceEEeccCC
Q 016752 118 ENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS-NSWRRIRVDF 196 (383)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~-~~Wr~~~~~~ 196 (383)
...++++|+.+++...+..... ....+.+.|.. .+-++. . ...+.+++..+ +....+. ..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~--------~v~~~~~spdg-~~l~~~-~--------~~~i~~~d~~~~~~~~~~~-~~ 81 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE--------LFEAPNWSPDG-KYLLLN-S--------EGLLYRLSLAGDPSPEKVD-TG 81 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS--------CCEEEEECTTS-SEEEEE-E--------TTEEEEEESSSCCSCEECC-CT
T ss_pred ceeEEEEeCCCCceeeeccCCc--------ceEeeEECCCC-CEEEEE-c--------CCeEEEEeCCCCCCceEec-cc
Confidence 3578999999988876654321 22345666543 333321 1 24688899888 7665543 11
Q ss_pred CeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCe-EEEEEecCCC
Q 016752 197 PYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGC-LYFSCLCNYP 274 (383)
Q Consensus 197 p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~ 274 (383)
+.......-...-+|.......... .....|..+|+.+.....+..... . ..+... +|+ |++......
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~-----~--~~~~~spdg~~l~~~~~~~~- 151 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP-----S--YWHGWSPDGKSFTYCGIRDQ- 151 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS-----E--EEEEECTTSSEEEEEEEETT-
T ss_pred cccccccceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC-----c--cceEECCCCCEEEEEECCCC-
Confidence 1100000011122565433333211 123458888888776554432221 1 122332 555 444444444
Q ss_pred CcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 275 QPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 275 ~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+.||.++ ..- +...+.. .......+.+.++|+.|++.... .....++.+++.++..+ .+
T Consensus 152 -~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~-------~~~~~i~~~~~~~~~~~-~~ 212 (297)
T 2ojh_A 152 -VFDIYSMDIDSG-VETRLTH-GEGRNDGPDYSPDGRWIYFNSSR-------TGQMQIWRVRVDGSSVE-RI 212 (297)
T ss_dssp -EEEEEEEETTTC-CEEECCC-SSSCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTSSCEE-EC
T ss_pred -ceEEEEEECCCC-cceEccc-CCCccccceECCCCCEEEEEecC-------CCCccEEEECCCCCCcE-EE
Confidence 78999987 211 1112221 11234456667788877766210 12446777787777776 44
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=49.15 E-value=1.4e+02 Score=26.17 Aligned_cols=57 Identities=16% Similarity=0.182 Sum_probs=37.4
Q ss_pred cEEEEEeC-CceeeeEEEcC-CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 276 PVDIWVLK-GCWTKAFSFHR-SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 276 ~l~iW~l~-~~W~~~~~i~~-~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++.||-++ ++-........ .-...+.-++++++|+.|+-. ..++.+..||+++++..
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sg----------s~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSG----------SKDICIKVWDLAQQVVL 162 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEE----------ETTSCEEEEETTTTEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEE----------eCCCeEEEEECCCCcEE
Confidence 89999998 43332222221 001345667778888876666 36778999999998876
No 162
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=49.12 E-value=1.4e+02 Score=26.35 Aligned_cols=188 Identities=7% Similarity=0.013 Sum_probs=97.8
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
+.+|+....+..+.|||..+++....-... ......+.+.|..+ + ++... ....+.+|+..++.
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~-~-l~s~s-------~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQAH-------VSEITKLKFFPSGE-A-LISSS-------QDMQLKIWSVKDGS 172 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTSS-------SSCEEEEEECTTSS-E-EEEEE-------TTSEEEEEETTTCC
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecccc-------cCccEEEEECCCCC-E-EEEEe-------CCCeEEEEeCCCCc
Confidence 335555556678999999988877653221 12344566776432 2 22222 24568889887653
Q ss_pred e-EEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEE----
Q 016752 189 W-RRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGN---- 260 (383)
Q Consensus 189 W-r~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~---- 260 (383)
= +... ...... ..+.+ +|.....+..+. .|..+|+.+.+.. .+..+..... .. ..+..
T Consensus 173 ~~~~~~-~h~~~v----~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~-~v--~~~~~~~~~ 238 (420)
T 3vl1_A 173 NPRTLI-GHRATV----TDIAIIDRGRNVLSASLDG------TIRLWECGTGTTIHTFNRKENPHD-GV--NSIALFVGT 238 (420)
T ss_dssp CCEEEE-CCSSCE----EEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECBTTBTTC-CE--EEEEEEECC
T ss_pred CceEEc-CCCCcE----EEEEEcCCCCEEEEEcCCC------cEEEeECCCCceeEEeecCCCCCC-Cc--cEEEEecCC
Confidence 1 1111 000000 11222 454444343332 3888998876543 3333221110 10 01111
Q ss_pred ------------------ECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCC-EEEEEeccCC
Q 016752 261 ------------------FSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSED-KVLVDKFKYG 320 (383)
Q Consensus 261 ------------------~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~v~l~~~~~~ 320 (383)
-+|.+.++..... .+.+|-+. +. ....+.........-+.+.++|. .++..
T Consensus 239 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g----- 309 (420)
T 3vl1_A 239 DRQLHEISTSKKNNLEFGTYGKYVIAGHVSG--VITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAG----- 309 (420)
T ss_dssp CSSCGGGCCCCCCTTCSSCTTEEEEEEETTS--CEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEE-----
T ss_pred cceeeecccCcccceEEcCCCCEEEEEcCCC--eEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEE-----
Confidence 2566666655544 79999987 32 22223221123455677777777 66666
Q ss_pred CccccCCCcEEEEEeCCCCe
Q 016752 321 EEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 321 ~~~~~~~~~~~~~ydl~~~~ 340 (383)
..++.+..||+++.+
T Consensus 310 -----~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 310 -----YENGMLAQWDLRSPE 324 (420)
T ss_dssp -----ETTSEEEEEETTCTT
T ss_pred -----eCCCeEEEEEcCCCc
Confidence 367889999998864
No 163
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=48.97 E-value=1.4e+02 Score=26.13 Aligned_cols=98 Identities=7% Similarity=-0.012 Sum_probs=56.4
Q ss_pred EEEEECCCceeeEe-cCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCC--CCceeEEE
Q 016752 229 IVAFNLESEEFQEV-PLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRS--VGDYVKAL 303 (383)
Q Consensus 229 il~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~--~~~~~~~~ 303 (383)
|..+|+.+...... ...... .. -..+... ++.+.+...... .+.+|.+++ .....+... ......-+
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~--~~--v~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~--~~~~~~~~~~~~~~~v~~~ 169 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPG--DA--ITGMKFNQFNTNQLFVSSIRG--ATTLRDFSG--SVIQVFAKTDSWDYWYCCV 169 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTT--CB--EEEEEEETTEEEEEEEEETTT--EEEEEETTS--CEEEEEECCCCSSCCEEEE
T ss_pred EEEEeCCCcccceeeecCCcC--Cc--eeEEEeCCCCCCEEEEEeCCC--EEEEEECCC--CceEEEeccCCCCCCeEEE
Confidence 88899887665433 322221 11 1233333 345555555444 899999883 112222221 11335567
Q ss_pred EEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 304 AYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 304 ~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+.+++..++.. ..++.+..||++.+.+. .+
T Consensus 170 ~~~~~~~~l~~~----------~~d~~i~i~d~~~~~~~-~~ 200 (383)
T 3ei3_B 170 DVSVSRQMLATG----------DSTGRLLLLGLDGHEIF-KE 200 (383)
T ss_dssp EEETTTTEEEEE----------ETTSEEEEEETTSCEEE-EE
T ss_pred EECCCCCEEEEE----------CCCCCEEEEECCCCEEE-Ee
Confidence 777888877766 36788999999776666 44
No 164
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=48.95 E-value=1.3e+02 Score=25.78 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=39.7
Q ss_pred CeEEEEEecCCCCcEEEEEeC-Ccee--eeEEEcCC-CCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWT--KAFSFHRS-VGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~--~~~~i~~~-~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
|.+.++..... .+.+|-++ +.-. ....+... -.....-+.+.++|..|+.. ..++.+..||+.+
T Consensus 299 ~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~----------~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV----------CDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE----------ETTSEEEEEEC--
T ss_pred CcEEEEEecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE----------eCCCEEEEEEecC
Confidence 66666665444 89999998 3322 33334321 12445667777888877766 4678999999864
No 165
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=48.94 E-value=1.5e+02 Score=26.68 Aligned_cols=189 Identities=8% Similarity=0.034 Sum_probs=92.8
Q ss_pred eeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC--
Q 016752 110 GLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN-- 187 (383)
Q Consensus 110 GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~-- 187 (383)
..|++... ..+...++.++....+-.. .....++.+|+..+ +|+.... ....+..++..+.
T Consensus 84 ~~ll~~~~-~~I~~i~l~~~~~~~~~~~--------~~~~~~l~~d~~~~--~lywsD~------~~~~I~~~~~~g~~~ 146 (400)
T 3p5b_L 84 AYLFFTNR-HEVRKMTLDRSEYTSLIPN--------LRNVVALDTEVASN--RIYWSDL------SQRMICSTQLDRAHG 146 (400)
T ss_dssp CEEEEEET-TEEEEECTTSCSCEEEECS--------CSCEEEEEEETTTT--EEEEEET------TTTEEEEEEC-----
T ss_pred ceeEEecc-ceeEEEccCCcceeEeccc--------cCcceEEeeeeccC--ceEEEec------CCCeEEEEEcccCCC
Confidence 34444432 3566666666655443211 22345688887554 3443321 1234445555431
Q ss_pred --ceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE--
Q 016752 188 --SWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN-- 260 (383)
Q Consensus 188 --~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-- 260 (383)
....+. ... .....++.+ +|.|||...... .|.++|+.......+-. .... .. ..+++
T Consensus 147 ~~~~~~~~-~~~---~~~p~glavD~~~~~lY~~d~~~~------~I~~~~~~g~~~~~l~~-~~~~-~P---~~iavdp 211 (400)
T 3p5b_L 147 VSSYDTVI-SRD---IQAPDGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLFR-ENGS-KP---RAIVVDP 211 (400)
T ss_dssp -CCCEEEE-CSS---CSCEEEEEEETTTTEEEEEETTTT------EEEEECTTTCSEEEEEE-CSSC-CE---EEEEEET
T ss_pred CCcceEEE-eCC---CCCcccEEEEecCCceEEEECCCC------eEEEEeCCCCceEEEEe-CCCC-Cc---ceEEEec
Confidence 111111 100 011134433 689999875433 49999998765544321 1111 11 23444
Q ss_pred ECCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEE--EeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 261 FSGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAY--SKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 261 ~~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~--~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
.+|.|+........ .+..-.++++-.+.. +.- ....|.|+ ..+++.||+.+ .....|..+|+..
T Consensus 212 ~~g~ly~td~~~~~-~I~~~~~dG~~~~~~-~~~---~l~~P~glavd~~~~~lY~aD---------~~~~~I~~~d~dG 277 (400)
T 3p5b_L 212 VHGFMYWTDWGTPA-KIKKGGLNGVDIYSL-VTE---NIQWPNGITLDLLSGRLYWVD---------SKLHSISSIDVNG 277 (400)
T ss_dssp TTTEEEEEECSSSC-CEEEEETTSCSCEEE-ECS---SCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTS
T ss_pred ccCeEEEEeCCCCC-EEEEEeCCCCccEEE-EEC---CCCceEEEEEEeCCCEEEEEE---------CCCCEEEEEeCCC
Confidence 36778876643222 444444444322221 111 12335444 44577899984 4566899999987
Q ss_pred CeEEEEE
Q 016752 339 QKAADQV 345 (383)
Q Consensus 339 ~~~~~~v 345 (383)
...+ .+
T Consensus 278 ~~~~-~~ 283 (400)
T 3p5b_L 278 GNRK-TI 283 (400)
T ss_dssp CCCE-EE
T ss_pred CccE-EE
Confidence 7666 44
No 166
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=48.64 E-value=29 Score=25.32 Aligned_cols=42 Identities=10% Similarity=0.056 Sum_probs=29.6
Q ss_pred CcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEE
Q 016752 119 NGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLV 167 (383)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 167 (383)
..+++.+|.|+.|. |..... ..+.+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~~~-----g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWV--PAGGST-----GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEE--EGGGCC-----SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceE--ECCCCC-----CceEEEEEEECCCCEEEEEEEE
Confidence 35889999999764 443211 2345678889888889998875
No 167
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=48.59 E-value=1.4e+02 Score=26.25 Aligned_cols=194 Identities=12% Similarity=0.079 Sum_probs=97.2
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC--c
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN--S 188 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~--~ 188 (383)
.|+....+..+.|||..|++....-....... .......+.+.+..+.+ ++... ....+.+|+.+.. .
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~-l~sgs-------~D~~v~~wd~~~~~~~ 241 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSG--HTADVLSLSINSLNANM-FISGS-------CDTTVRLWDLRITSRA 241 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSS--CCSCEEEEEECSSSCCE-EEEEE-------TTSCEEEEETTTTCCC
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCC--CccCeEEEEeecCCCCE-EEEEE-------CCCeEEEEECCCCCcc
Confidence 45545556789999999988764332211100 02233345555433332 22222 2345778887632 1
Q ss_pred eEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCc--CCeeeeEEEE-EC
Q 016752 189 WRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDK--KNVLVMFVGN-FS 262 (383)
Q Consensus 189 Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~--~~~~~~~L~~-~~ 262 (383)
-+... ... ..-..+.+ +|.....+..+. .|-.+|+.+..-. .+........ ... -..+.. .+
T Consensus 242 ~~~~~-~h~----~~v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~ 309 (380)
T 3iz6_a 242 VRTYH-GHE----GDINSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPI-VTSVAFSIS 309 (380)
T ss_dssp CEEEC-CCS----SCCCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCS-CSEEEECSS
T ss_pred eEEEC-CcC----CCeEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCc-eEEEEECCC
Confidence 12211 000 00022322 454433333322 3888999876543 3333222111 111 112333 26
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC-CC--ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS-VG--DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~-~~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
|++.++..... .+.||-+. ++- ...+... -+ ..+.-++++++|..|+-. ..++.+..||+++
T Consensus 310 g~~l~~g~~dg--~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg----------s~D~~i~iW~~~~ 375 (380)
T 3iz6_a 310 GRLLFAGYSNG--DCYVWDTLLAEM--VLNLGTLQNSHEGRISCLGLSSDGSALCTG----------SWDKNLKIWAFSG 375 (380)
T ss_dssp SSEEEEECTTS--CEEEEETTTCCE--EEEECCSCSSCCCCCCEEEECSSSSEEEEE----------CTTSCEEEEECCS
T ss_pred CCEEEEEECCC--CEEEEECCCCce--EEEEecccCCCCCceEEEEECCCCCEEEEe----------eCCCCEEEEecCC
Confidence 77777766554 89999876 432 2233211 11 335567788888876656 4677899999987
Q ss_pred Ce
Q 016752 339 QK 340 (383)
Q Consensus 339 ~~ 340 (383)
++
T Consensus 376 ~~ 377 (380)
T 3iz6_a 376 HR 377 (380)
T ss_dssp SS
T ss_pred Cc
Confidence 64
No 168
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=48.26 E-value=1.3e+02 Score=29.44 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=22.9
Q ss_pred cceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeE
Q 016752 205 DGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQE 241 (383)
Q Consensus 205 ~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~ 241 (383)
.++..+|.+|....... |.++|..+.+ |+.
T Consensus 72 ~P~v~~g~vyv~~~~~~-------v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWSV-------VHAIDTRTGNRIWTY 103 (677)
T ss_dssp CCEEETTEEEEECGGGC-------EEEEETTTTEEEEEE
T ss_pred CCEEECCEEEEECCCCe-------EEEEECCCCcEEEEE
Confidence 67889999998765443 9999997654 554
No 169
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=46.74 E-value=1.4e+02 Score=25.62 Aligned_cols=184 Identities=9% Similarity=0.085 Sum_probs=94.1
Q ss_pred eEEEecCCCcEEEEcCCccceee-cCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCce
Q 016752 111 LIALKNDENGIAFWNPSTKEHLI-LPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSW 189 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~W 189 (383)
+++....+..+.|||..+++... +...+. ....+.+.|.. .+ ++... ....+.+|+..++.=
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~--------~~~~~~~spdg-~~--l~~g~------~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGKQIKSIDAGPV--------DAWTLAFSPDS-QY--LATGT------HVGKVNIFGVESGKK 156 (321)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCTT--------CCCCEEECTTS-SE--EEEEC------TTSEEEEEETTTCSE
T ss_pred EEEEEeCCCcEEEEECCCCCEEEEEeCCCc--------cEEEEEECCCC-CE--EEEEc------CCCcEEEEEcCCCce
Confidence 33333356789999998877543 222111 11125555533 22 22221 245677888876642
Q ss_pred EEeccCCCeeeecCCccee--eCceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-CCeE
Q 016752 190 RRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF-SGCL 265 (383)
Q Consensus 190 r~~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L 265 (383)
...-....... ..+. -+|..-..+..+. .|..+|+.+.+.. .+..... .. ..+... +|.+
T Consensus 157 ~~~~~~~~~~v----~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~----~v--~~l~~spd~~~ 220 (321)
T 3ow8_A 157 EYSLDTRGKFI----LSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHTLEGHAM----PI--RSLTFSPDSQL 220 (321)
T ss_dssp EEEEECSSSCE----EEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSS----CC--CEEEECTTSCE
T ss_pred eEEecCCCceE----EEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCC----ce--eEEEEcCCCCE
Confidence 21110000000 1111 1455444333332 3888999877543 2332211 11 123333 5666
Q ss_pred EEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 266 YFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.+...... .+.||-++ ..- ..++.. -.....-+++.++|..++-. ..++.+..||+++++..
T Consensus 221 l~s~s~dg--~i~iwd~~~~~~--~~~~~~-h~~~v~~~~~sp~~~~l~s~----------s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 221 LVTASDDG--YIKIYDVQHANL--AGTLSG-HASWVLNVAFCPDDTHFVSS----------SSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEEECTTS--CEEEEETTTCCE--EEEECC-CSSCEEEEEECTTSSEEEEE----------ETTSCEEEEETTTTEEE
T ss_pred EEEEcCCC--eEEEEECCCcce--eEEEcC-CCCceEEEEECCCCCEEEEE----------eCCCcEEEEeCCCCEEE
Confidence 55555444 79999987 432 223321 11234556777888776666 36778999999998866
No 170
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=46.61 E-value=1.3e+02 Score=25.36 Aligned_cols=157 Identities=10% Similarity=0.054 Sum_probs=82.4
Q ss_pred eEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCCCeeeecCCccee--eCceEEEEEecCCCCCC
Q 016752 148 VVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPKDDI 225 (383)
Q Consensus 148 ~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~ 225 (383)
...+..+++..+ .++.+.. ....+..|+..++.-+... .+.. -.++. -+|. +|++...
T Consensus 14 ~~Egp~w~~~~~--~l~~~d~------~~~~i~~~d~~~~~~~~~~--~~~~----~~~i~~~~dG~-l~v~~~~----- 73 (297)
T 3g4e_A 14 CGESPVWEEVSN--SLLFVDI------PAKKVCRWDSFTKQVQRVT--MDAP----VSSVALRQSGG-YVATIGT----- 73 (297)
T ss_dssp BEEEEEEETTTT--EEEEEET------TTTEEEEEETTTCCEEEEE--CSSC----EEEEEEBTTSS-EEEEETT-----
T ss_pred cccCCeEECCCC--EEEEEEC------CCCEEEEEECCCCcEEEEe--CCCc----eEEEEECCCCC-EEEEECC-----
Confidence 344666776444 3333321 2456778888776544333 1110 01222 2677 4555432
Q ss_pred ccEEEEEECCCceeeEecC-CCcCCcCCeeeeEEEEE-CCeEEEEEecCC-------CCcEEEEEeC--CceeeeEEEcC
Q 016752 226 ENLIVAFNLESEEFQEVPL-PHLEDKKNVLVMFVGNF-SGCLYFSCLCNY-------PQPVDIWVLK--GCWTKAFSFHR 294 (383)
Q Consensus 226 ~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~-------~~~l~iW~l~--~~W~~~~~i~~ 294 (383)
.|..||+.+.++..+.. +....... ...+... +|+|++...... ...-.||.++ +.-... ...
T Consensus 74 --~l~~~d~~~g~~~~~~~~~~~~~~~~--~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--~~~ 147 (297)
T 3g4e_A 74 --KFCALNWKEQSAVVLATVDNDKKNNR--FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKY--FDQ 147 (297)
T ss_dssp --EEEEEETTTTEEEEEEECCTTCSSEE--EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEE--EEE
T ss_pred --eEEEEECCCCcEEEEEecCCCCCCCC--CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEE--eec
Confidence 49999999998877642 22211111 1123333 688887765422 1256899888 332221 111
Q ss_pred CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeC--CCCeE
Q 016752 295 SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDP--QSQKA 341 (383)
Q Consensus 295 ~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl--~~~~~ 341 (383)
+ ....-+++.++|+.+++.. .....+..||+ +++++
T Consensus 148 -~-~~pngi~~spdg~~lyv~~---------~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 148 -V-DISNGLDWSLDHKIFYYID---------SLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp -E-SBEEEEEECTTSCEEEEEE---------GGGTEEEEEEECTTTCCE
T ss_pred -c-ccccceEEcCCCCEEEEec---------CCCCcEEEEeccCCCCcc
Confidence 0 1123355567788888773 34567888875 56655
No 171
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=46.34 E-value=1.2e+02 Score=25.68 Aligned_cols=119 Identities=7% Similarity=-0.006 Sum_probs=57.6
Q ss_pred Cc-eEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeCCcee
Q 016752 210 DG-HVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLKGCWT 287 (383)
Q Consensus 210 ~G-~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~~~W~ 287 (383)
+| .+||...... .|..+|.. +..+.+..|... ...+... +|+|++...... .+.+|..+++..
T Consensus 55 ~g~~l~~~d~~~~------~i~~~~~~-g~~~~~~~~~~~------~~gl~~d~dG~l~v~~~~~~--~v~~~~~~g~~~ 119 (305)
T 3dr2_A 55 AQRTLVWSDLVGR------RVLGWRED-GTVDVLLDATAF------TNGNAVDAQQRLVHCEHGRR--AITRSDADGQAH 119 (305)
T ss_dssp GGTEEEEEETTTT------EEEEEETT-SCEEEEEESCSC------EEEEEECTTSCEEEEETTTT--EEEEECTTSCEE
T ss_pred CCCEEEEEECCCC------EEEEEeCC-CCEEEEeCCCCc------cceeeECCCCCEEEEECCCC--EEEEECCCCCEE
Confidence 45 4899875543 48899984 445555444321 1123333 678765543222 455554444433
Q ss_pred eeEEEcCCCC-ceeEEEEEEeCCCEEEEEeccCCCc--------cccCCCcEEEEEeCCCCeEEEEE
Q 016752 288 KAFSFHRSVG-DYVKALAYSKSEDKVLVDKFKYGEE--------DDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 288 ~~~~i~~~~~-~~~~~~~~~~~g~~v~l~~~~~~~~--------~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.......... ....-+.+.++|. +++.+..++-. ........++.||+++++++ .+
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-~~ 184 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-RM 184 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-EE
T ss_pred EEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-EE
Confidence 2211110000 1122355666665 66642100000 00012357999999888877 55
No 172
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=46.28 E-value=1.6e+02 Score=26.04 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=50.1
Q ss_pred EEEEEECCCce--eeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC--CceeeeEEEcC-----CCCc
Q 016752 228 LIVAFNLESEE--FQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHR-----SVGD 298 (383)
Q Consensus 228 ~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~-----~~~~ 298 (383)
.|..+|+.+.. ...+..... .. -..+...+|.+.+...... .+.+|.+. ..-.....+.. .-..
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~---~~--v~~~~~~~~~~l~s~~~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEG---TP--INNVYFAAGALFVSSGFDT--SIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTT---SC--EEEEEEETTEEEEEETTTE--EEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred eEEEEEcCCCcCchhhhhccCC---CC--ceEEEeCCCCEEEEecCCc--cEEEEeccCCCCCccceeccCccEEccCCc
Confidence 48899998753 233332111 11 1123445777665554444 89999988 11111111111 0113
Q ss_pred eeEEEEEEeCCC---EEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 299 YVKALAYSKSED---KVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 299 ~~~~~~~~~~g~---~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
...-+++.++|. .++.. ...+.+..|+++.
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~----------g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEV----------GKNNFCALYNLSN 419 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEE----------ETTTEEEEEESCC
T ss_pred ceEEEEEccCCCCcceEEEE----------cCCceEEEEeccC
Confidence 345567777766 55555 3677888898875
No 173
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=45.74 E-value=2e+02 Score=27.15 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=68.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-Cce
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCW 286 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W 286 (383)
+|.+|....... .|..+|..+.+. ..++.... . . .+... +|+..++.... ..+.+|-+. ..-
T Consensus 148 ~~~~~vs~~~d~------~V~v~D~~t~~~~~~i~~g~~-----~-~-~v~~spdg~~l~v~~~d--~~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRDAG------QIALVDGDSKKIVKVIDTGYA-----V-H-ISRMSASGRYLLVIGRD--ARIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGGGT------EEEEEETTTCCEEEEEECSTT-----E-E-EEEECTTSCEEEEEETT--SEEEEEETTSSSC
T ss_pred CCEEEEEEcCCC------eEEEEECCCceEEEEEecCcc-----c-c-eEEECCCCCEEEEECCC--CeEEEEECcCCCC
Confidence 677776554332 488899987654 44443211 1 1 22232 66655555544 389999993 222
Q ss_pred eeeEEEcCCCCceeEEEEEEe----CCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEE
Q 016752 287 TKAFSFHRSVGDYVKALAYSK----SEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 287 ~~~~~i~~~~~~~~~~~~~~~----~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
..+.++.. +...+-+++++ +|+.++... ..+..+..+|..+.+....+..
T Consensus 213 ~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~---------~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 213 TKVAEIKI--GIEARSVESSKFKGYEDRYTIAGA---------YWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp EEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEE---------EESSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEec--CCCcceEEeCCCcCCCCCEEEEEE---------ccCCeEEEEeccccccceeecc
Confidence 33445553 34456778888 999988873 2467899999999887645443
No 174
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=45.36 E-value=1.6e+02 Score=25.86 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=35.5
Q ss_pred CeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCC---CceeEEEEEEeCCC-EEEEEeccCCCccccCCCc---EEEEE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSV---GDYVKALAYSKSED-KVLVDKFKYGEEDDDINRW---ELYWY 334 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~---~~~~~~~~~~~~g~-~v~l~~~~~~~~~~~~~~~---~~~~y 334 (383)
+.+.+...... .+.+|-++ +.-.......... .....-+.+.++++ .++.. ..++ .+..|
T Consensus 178 ~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----------~~d~~~~~i~~~ 245 (416)
T 2pm9_A 178 AHVFASAGSSN--FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA----------TGSDNDPSILIW 245 (416)
T ss_dssp TTEEEEESSSS--CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE----------ECCSSSCCCCEE
T ss_pred CcEEEEEcCCC--CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE----------ECCCCCceEEEE
Confidence 56666655444 79999998 4433222221100 23355566667654 44444 2343 77888
Q ss_pred eCCCC
Q 016752 335 DPQSQ 339 (383)
Q Consensus 335 dl~~~ 339 (383)
|+++.
T Consensus 246 d~~~~ 250 (416)
T 2pm9_A 246 DLRNA 250 (416)
T ss_dssp ETTST
T ss_pred eCCCC
Confidence 88764
No 175
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=44.64 E-value=1.4e+02 Score=24.96 Aligned_cols=67 Identities=15% Similarity=0.312 Sum_probs=39.8
Q ss_pred CcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 107 SCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
|.+|+|.... ++.+.|||+.|++...+-..... ......+.+.+.. +|-+.+ . ....+.+++..+
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~-----~~~V~~v~~~~~~-~~l~sg-s-------~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP-----GEYISSVAWIKEG-NYLAVG-T-------SSAEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST-----TCCEEEEEECTTS-SEEEEE-E-------TTSEEEEEETTT
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC-----CCeEEEEEECCCC-CEEEEE-E-------CCCcEEEeecCC
Confidence 5677766554 56799999999987654332221 2234456666643 333222 1 235678888887
Q ss_pred Cc
Q 016752 187 NS 188 (383)
Q Consensus 187 ~~ 188 (383)
+.
T Consensus 99 ~~ 100 (318)
T 4ggc_A 99 QK 100 (318)
T ss_dssp TE
T ss_pred ce
Confidence 64
No 176
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=44.56 E-value=2e+02 Score=27.43 Aligned_cols=31 Identities=16% Similarity=0.057 Sum_probs=22.8
Q ss_pred CcceeeCceEEEEEe-cCCCCCCccEEEEEEC-CCc--eeeE
Q 016752 204 WDGTFADGHVHWLVT-NNPKDDIENLIVAFNL-ESE--EFQE 241 (383)
Q Consensus 204 ~~~v~~~G~lywl~~-~~~~~~~~~~il~fD~-~~e--~~~~ 241 (383)
..++..+|.+|.... ... +.++|. .+. .|+.
T Consensus 56 ~~P~v~~g~vyv~~~~~~~-------v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNN-------TYALNLNDPGKIVWQH 90 (571)
T ss_dssp SCCEEETTEEEEECSTTTC-------EEEEETTCTTSEEEEE
T ss_pred cccEEECCEEEEEeCCCCE-------EEEEeCCCCccEEEEE
Confidence 367889999998765 333 999998 654 4654
No 177
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.26 E-value=2.4e+02 Score=27.30 Aligned_cols=214 Identities=12% Similarity=0.044 Sum_probs=0.0
Q ss_pred eeCcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEE
Q 016752 105 IDSCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYS 183 (383)
Q Consensus 105 ~~s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 183 (383)
+++.+|.|...+ ....++.++|-......+-......+. ++++|..++ +++.... ....+++.+
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-------GlAvD~~~~--~lY~tD~------~~~~I~v~~ 420 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-------GIAVDWVAR--NLYWTDT------GTDRIEVTR 420 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-------EEEEETTTT--EEEEEET------TTTEEEEEE
T ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-------ceEEecccC--cEEEEeC------CCCcEEEEe
Q ss_pred cCCCceEEeccCCCeeeecCCcceeeC---ceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE
Q 016752 184 LRSNSWRRIRVDFPYYILHGWDGTFAD---GHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN 260 (383)
Q Consensus 184 s~~~~Wr~~~~~~p~~~~~~~~~v~~~---G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~ 260 (383)
+.+..-+.+. ........++.++ |.|||...... ..|..+++....-..+- ...-..+. -+.+-.
T Consensus 421 ~~G~~~~~l~----~~~l~~P~~iavdp~~G~ly~tD~g~~-----~~I~r~~~dG~~~~~l~--~~~l~~P~-GlalD~ 488 (619)
T 3s94_A 421 LNGTMRKILI----SEDLEEPRAIVLDPMVGYMYWTDWGEI-----PKIERAALDGSDRVVLV--NTSLGWPN-GLALDY 488 (619)
T ss_dssp TTSCSCEEEE----CTTCCSEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEE--CSSCSCEE-EEEEET
T ss_pred CCCCeEEEEE----ECCCCCeeeEEEEcCCCcEEEecCCCC-----CEEEEEccCCCccEEEE--eCCCCCCe-eeEEcc
Q ss_pred ECCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 261 FSGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 261 ~~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
.+++||++..... .++...+++.-.+...-. ....|.+++-.++.||+.+ .....+...|..++
T Consensus 489 ~~~~LY~aD~~~~--~I~~~~~dG~~~~~~~~~----~l~~P~glav~~~~ly~tD---------~~~~~I~~~~k~~g- 552 (619)
T 3s94_A 489 DEGKIYWGDAKTD--KIEVMNTDGTGRRVLVED----KIPHIFGFTLLGDYVYWTD---------WQRRSIERVHKRSA- 552 (619)
T ss_dssp TTTEEEEEETTTT--EEEEEESSSCCCEEEEEC----CCCSSCCEEEETTEEEEEC---------TTSSCEEEEESSSC-
T ss_pred cCCEEEEEECCCC--EEEEEecCCCceEEEecc----CCCCcEEEEEECCEEEEee---------cCCCeEEEEEcCCC-
Q ss_pred EEEEEEEeccCCCeeeEEEEEcc
Q 016752 341 AADQVTIHGVPQGCRDTLVCVDS 363 (383)
Q Consensus 341 ~~~~v~~~~~~~~~~~~~~y~~s 363 (383)
-. ++-..+...- +.+.+|..+
T Consensus 553 ~~-~~~~~~~~~~-~~i~~~~~~ 573 (619)
T 3s94_A 553 ER-EVIIDQLPDL-MGLKATNVH 573 (619)
T ss_dssp CE-EEEECSCCCE-EEEEEEESS
T ss_pred ce-EEEecCCCCC-ceeeecccc
No 178
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=43.25 E-value=1.5e+02 Score=24.95 Aligned_cols=186 Identities=12% Similarity=0.149 Sum_probs=88.5
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|+....+..+.|||..+++....-... ......+.+++..+ + ++... ....+.+|+.+++.-.
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~-~-l~s~~-------~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCLKTLKGH-------SNYVFCCNFNPQSN-L-IVSGS-------FDESVRIWDVKTGKCL 142 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSS-E-EEEEE-------TTSCEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEcCC-------CCCEEEEEEcCCCC-E-EEEEe-------CCCcEEEEECCCCEEE
Confidence 4444445667999998887654321111 11233455665332 2 22222 2345788888776421
Q ss_pred -EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEEE-CCeE
Q 016752 191 -RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGNF-SGCL 265 (383)
Q Consensus 191 -~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~L 265 (383)
... ..... -..+.+ +|.+...+..+. .|..+|+.+.+... +..... ... ..+... +|..
T Consensus 143 ~~~~-~~~~~----v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~ 206 (312)
T 4ery_A 143 KTLP-AHSDP----VSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDN---PPV--SFVKFSPNGKY 206 (312)
T ss_dssp EEEC-CCSSC----EEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSSC---CCE--EEEEECTTSSE
T ss_pred EEec-CCCCc----EEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccCC---Cce--EEEEECCCCCE
Confidence 111 00000 011222 455444443332 38889998765432 221111 111 122222 4666
Q ss_pred EEEEecCCCCcEEEEEeC-CceeeeEEEcC-CCCceeEEEEEE-eCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 266 YFSCLCNYPQPVDIWVLK-GCWTKAFSFHR-SVGDYVKALAYS-KSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 266 ~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~-~~~~~~~~~~~~-~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.++..... .+.+|-+. +.- ...+.. .-........+. .++..++.. ..++.+..||+++++..
T Consensus 207 l~~~~~d~--~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sg----------~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 207 ILAATLDN--TLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSG----------SEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp EEEEETTT--EEEEEETTTTEE--EEEECSSCCSSSCCCEEEECSSSCEEEEC----------CTTSCEEEEETTTCCEE
T ss_pred EEEEcCCC--eEEEEECCCCcE--EEEEEecCCceEEEEEEEEeCCCcEEEEE----------CCCCEEEEEECCCchhh
Confidence 55555444 89999987 432 222221 100111112222 344444444 46778999999998876
No 179
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=43.10 E-value=1.7e+02 Score=25.51 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=53.3
Q ss_pred EEEEEECCCcee-eEecCCCcCC--------cCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcC--
Q 016752 228 LIVAFNLESEEF-QEVPLPHLED--------KKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHR-- 294 (383)
Q Consensus 228 ~il~fD~~~e~~-~~i~~P~~~~--------~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~-- 294 (383)
.|..+|+.+.+. ..+..|.... .... -..+... +|.+.+...... .+.||-++ ++ ....+..
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~--~~~~~~~~~ 333 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDSGETLCSAGWDG--KLRFWDVKTKE--RITTLNMHC 333 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSSSSEEEEEETTS--EEEEEETTTTE--EEEEEECCG
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCc-EEEEEECCCCCEEEEEeCCC--eEEEEEcCCCc--eeEEEeccc
Confidence 489999876543 3444322100 1111 1223333 566666655444 89999987 43 3333331
Q ss_pred ---CC---------------CceeEEEEEEeCC----------CEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 295 ---SV---------------GDYVKALAYSKSE----------DKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 295 ---~~---------------~~~~~~~~~~~~g----------~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
.. .....-+.+.++| ..++.. ..++.+..||+++++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~----------~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV----------CLDRSIRWFREAGGK 397 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE----------ETTTEEEEEEEEC--
T ss_pred CcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe----------cCCCcEEEEEcCCCC
Confidence 01 2345566777776 455555 367899999998764
No 180
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=42.79 E-value=2.4e+02 Score=27.33 Aligned_cols=68 Identities=10% Similarity=0.033 Sum_probs=38.2
Q ss_pred CcCee-EEEecCCCcEEEEcCCcc---ceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEE
Q 016752 107 SCNGL-IALKNDENGIAFWNPSTK---EHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVY 182 (383)
Q Consensus 107 s~~GL-ll~~~~~~~~~V~NP~T~---~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vy 182 (383)
|-+|- |++.. ...++++|..++ +...|..... ....+.+.|..+ + |+... ...+.++
T Consensus 117 SpDg~~l~~~~-~~~i~~~d~~~~~~~~~~~l~~~~~--------~~~~~~~SPDG~-~-la~~~--------~~~i~~~ 177 (741)
T 2ecf_A 117 SPDAQRLLFPL-GGELYLYDLKQEGKAAVRQLTHGEG--------FATDAKLSPKGG-F-VSFIR--------GRNLWVI 177 (741)
T ss_dssp CTTSSEEEEEE-TTEEEEEESSSCSTTSCCBCCCSSS--------CEEEEEECTTSS-E-EEEEE--------TTEEEEE
T ss_pred CCCCCEEEEEe-CCcEEEEECCCCCcceEEEcccCCc--------ccccccCCCCCC-E-EEEEe--------CCcEEEE
Confidence 44553 44333 368999999998 6555543321 233455666433 2 22222 1267888
Q ss_pred EcCCCceEEec
Q 016752 183 SLRSNSWRRIR 193 (383)
Q Consensus 183 ss~~~~Wr~~~ 193 (383)
+..++..+.+.
T Consensus 178 d~~~g~~~~~~ 188 (741)
T 2ecf_A 178 DLASGRQMQLT 188 (741)
T ss_dssp ETTTTEEEECC
T ss_pred ecCCCCEEEec
Confidence 88887766554
No 181
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=42.31 E-value=2e+02 Score=27.69 Aligned_cols=107 Identities=14% Similarity=0.153 Sum_probs=0.0
Q ss_pred cceeeCceEEEEEe-cCCCCCCccEEEEEEC-CCceeeEecCCCcCC-------------------cCCeee----eEEE
Q 016752 205 DGTFADGHVHWLVT-NNPKDDIENLIVAFNL-ESEEFQEVPLPHLED-------------------KKNVLV----MFVG 259 (383)
Q Consensus 205 ~~v~~~G~lywl~~-~~~~~~~~~~il~fD~-~~e~~~~i~~P~~~~-------------------~~~~~~----~~L~ 259 (383)
.++..+|.+|.... ... |.++|. .+.+-..-.-+.... ... . +.++
T Consensus 57 tP~v~~g~vyv~~~~~~~-------v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g--~~~~rV~v~ 127 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPNN-------TFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDG--KTPALILKT 127 (599)
T ss_dssp CCEEETTEEEEECSTTTC-------EEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCS--SSCCEEEEE
T ss_pred ccEEECCEEEEEeCCCCE-------EEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCC--cceeEEEEE
Q ss_pred EECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCC------CcEEE
Q 016752 260 NFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDIN------RWELY 332 (383)
Q Consensus 260 ~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~------~~~~~ 332 (383)
..+|.|+.+...... .+|..+ ..-...+.+... |+.. ++.|++. .. ++.++
T Consensus 128 t~dg~l~AlDa~TG~---~~W~~~~~~~~~~~~~~ss------P~v~---~g~V~vg----------~~g~e~g~~g~v~ 185 (599)
T 1w6s_A 128 QLDGNVAALNAETGE---TVWKVENSDIKVGSTLTIA------PYVV---KDKVIIG----------SSGAELGVRGYLT 185 (599)
T ss_dssp CTTSEEEEEETTTCC---EEEEEECCCGGGTCBCCSC------CEEE---TTEEEEC----------CBCGGGTCCCEEE
T ss_pred cCCCEEEEEECCCCC---EEEeecCCCCCccceeecC------CEEE---CCEEEEE----------ecccccCCCCeEE
Q ss_pred EEeCCCCeEE
Q 016752 333 WYDPQSQKAA 342 (383)
Q Consensus 333 ~ydl~~~~~~ 342 (383)
.||.+|++..
T Consensus 186 A~D~~TG~~~ 195 (599)
T 1w6s_A 186 AYDVKTGEQV 195 (599)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
No 182
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=42.24 E-value=1.8e+02 Score=25.63 Aligned_cols=201 Identities=9% Similarity=0.024 Sum_probs=90.4
Q ss_pred eCcCeeEEEe--cCCCcEEEEcCCcccee--ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEE
Q 016752 106 DSCNGLIALK--NDENGIAFWNPSTKEHL--ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSV 181 (383)
Q Consensus 106 ~s~~GLll~~--~~~~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~v 181 (383)
.+.+++.++. ..+..+.|||..+.... .++..... ......+.+.+..+.+-+.+ . ....+.+
T Consensus 42 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~p~~~~~l~s~-s-------~dg~v~v 108 (402)
T 2aq5_A 42 VNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH-----TAPVLDIAWCPHNDNVIASG-S-------EDCTVMV 108 (402)
T ss_dssp ECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC-----SSCEEEEEECTTCTTEEEEE-E-------TTSEEEE
T ss_pred ECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecC-----CCCEEEEEeCCCCCCEEEEE-e-------CCCeEEE
Confidence 3334444433 23457888887443221 11111111 23455677777444433322 2 2456889
Q ss_pred EEcCCCceEEeccCCCeeee-cCC--cceee--Cc-eEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCee
Q 016752 182 YSLRSNSWRRIRVDFPYYIL-HGW--DGTFA--DG-HVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVL 254 (383)
Q Consensus 182 yss~~~~Wr~~~~~~p~~~~-~~~--~~v~~--~G-~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 254 (383)
|+..++............+. +.. ..+.+ +| .+...+..+. .|..+|+.+.+... +....+. ..
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~--~~-- 178 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVWDVGTGAAVLTLGPDVHP--DT-- 178 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEEETTTTEEEEEECTTTCC--SC--
T ss_pred EEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEEECCCCCccEEEecCCCC--Cc--
Confidence 99887643211100111111 111 22222 34 2333333332 38899998776543 3211111 11
Q ss_pred eeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEE-cCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEE
Q 016752 255 VMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSF-HRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 255 ~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i-~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
-..+... +|.+.+...... .+.||-++ +.- ...+ ...-+....-+.+.++|..+... +.. ..++.+
T Consensus 179 v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~------~~d~~i 247 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDK--RVRVIEPRKGTV--VAEKDRPHEGTRPVHAVFVSEGKILTTG-FSR------MSERQV 247 (402)
T ss_dssp EEEEEECTTSSCEEEEETTS--EEEEEETTTTEE--EEEEECSSCSSSCCEEEECSTTEEEEEE-ECT------TCCEEE
T ss_pred eEEEEECCCCCEEEEEecCC--cEEEEeCCCCce--eeeeccCCCCCcceEEEEcCCCcEEEEe-ccC------CCCceE
Confidence 1123332 566666665444 89999988 432 2233 11011112334455555433332 000 145678
Q ss_pred EEEeCCCCe
Q 016752 332 YWYDPQSQK 340 (383)
Q Consensus 332 ~~ydl~~~~ 340 (383)
..||+++.+
T Consensus 248 ~iwd~~~~~ 256 (402)
T 2aq5_A 248 ALWDTKHLE 256 (402)
T ss_dssp EEEETTBCS
T ss_pred EEEcCcccc
Confidence 888887654
No 183
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=41.27 E-value=1.8e+02 Score=25.26 Aligned_cols=76 Identities=17% Similarity=0.093 Sum_probs=40.7
Q ss_pred ceee--CceEEEEEecCCCCCCccEEEEEECCCce-eeEecCCCcCC-cCCeeeeEEEEE--CCeEEEEEecC-CCCcEE
Q 016752 206 GTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVPLPHLED-KKNVLVMFVGNF--SGCLYFSCLCN-YPQPVD 278 (383)
Q Consensus 206 ~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~-~~~~~~~~L~~~--~G~L~~~~~~~-~~~~l~ 278 (383)
++.+ +|.|||+..... ......|+.||+.+++ ...+.+|.... ...+ ...+++. +|.+++..... ....+.
T Consensus 71 gv~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~-~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSF-VNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp EEEECSSSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCC-CCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred EEEEcCCCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhcccccc-cceEEEecCCCEEEEEcCccCCCCeEE
Confidence 4454 588998864310 0001249999999877 56677764321 1111 1234555 46676665410 122677
Q ss_pred EEEeC
Q 016752 279 IWVLK 283 (383)
Q Consensus 279 iW~l~ 283 (383)
+|-++
T Consensus 149 v~d~~ 153 (343)
T 2qe8_A 149 RVDLQ 153 (343)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 77665
No 184
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=41.02 E-value=14 Score=21.99 Aligned_cols=16 Identities=50% Similarity=0.615 Sum_probs=11.8
Q ss_pred CCCcHHHHHHHHccCC
Q 016752 2 AGLPTDINIDILSRLS 17 (383)
Q Consensus 2 ~~LP~Dll~eIL~rLP 17 (383)
..||.||.+|+|+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4688888888887544
No 185
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=40.24 E-value=1.7e+02 Score=24.82 Aligned_cols=191 Identities=10% Similarity=0.006 Sum_probs=103.2
Q ss_pred CeeEEEecC---CCcEEEEcCCccceee-cCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 109 NGLIALKND---ENGIAFWNPSTKEHLI-LPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 109 ~GLll~~~~---~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+|.|..... ...+.+.++.|++... +|... .....++..+. + ++..... ....+.||+.
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-------~~fgeGi~~~g--~--~lyv~t~------~~~~v~viD~ 93 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-------SYFGEGLTLLN--E--KLYQVVW------LKNIGFIYDR 93 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEET--T--EEEEEET------TCSEEEEEET
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-------CcceEEEEEeC--C--EEEEEEe------cCCEEEEEEC
Confidence 477666542 4689999999998753 33221 11223444442 2 4444431 3456788998
Q ss_pred CCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce-eeEecCCCcCCcCCeeeeEEEEECC
Q 016752 185 RSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE-FQEVPLPHLEDKKNVLVMFVGNFSG 263 (383)
Q Consensus 185 ~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~L~~~~G 263 (383)
.+.. .+. .++.. ....-++..+|.--|++... ..|..+|+++.+ -..|+.......... --.+...+|
T Consensus 94 ~t~~--v~~-~i~~g-~~~g~glt~Dg~~l~vs~gs------~~l~viD~~t~~v~~~I~Vg~~~~p~~~-~nele~~dg 162 (266)
T 2iwa_A 94 RTLS--NIK-NFTHQ-MKDGWGLATDGKILYGSDGT------SILYEIDPHTFKLIKKHNVKYNGHRVIR-LNELEYING 162 (266)
T ss_dssp TTTE--EEE-EEECC-SSSCCEEEECSSSEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCC-EEEEEEETT
T ss_pred CCCc--EEE-EEECC-CCCeEEEEECCCEEEEECCC------CeEEEEECCCCcEEEEEEECCCCccccc-ceeEEEECC
Confidence 8653 332 22222 01113466677544455422 359999998744 455554321100000 012333388
Q ss_pred eEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC-C---------CceeEEEE--EEeCCCEEEEEeccCCCccccCCCcE
Q 016752 264 CLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS-V---------GDYVKALA--YSKSEDKVLVDKFKYGEEDDDINRWE 330 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~-~---------~~~~~~~~--~~~~g~~v~l~~~~~~~~~~~~~~~~ 330 (383)
+|++...... .|.+.+ .++..+.+|+.. + +....|.| +.++++.+|+.. ....+
T Consensus 163 ~lyvn~~~~~----~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg---------k~~~~ 229 (266)
T 2iwa_A 163 EVWANIWQTD----CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG---------KLWPK 229 (266)
T ss_dssp EEEEEETTSS----EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE---------TTCSE
T ss_pred EEEEecCCCC----eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC---------CCCCe
Confidence 8875553322 788888 677777777751 1 01124444 456788888883 35667
Q ss_pred EEEEeCCCCe
Q 016752 331 LYWYDPQSQK 340 (383)
Q Consensus 331 ~~~ydl~~~~ 340 (383)
++..++....
T Consensus 230 v~~i~l~~~~ 239 (266)
T 2iwa_A 230 LFEIKLHLVR 239 (266)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeccc
Confidence 8877775543
No 186
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=39.82 E-value=1.9e+02 Score=25.22 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=53.0
Q ss_pred EEEEEECCCceee-EecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEE
Q 016752 228 LIVAFNLESEEFQ-EVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 228 ~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 304 (383)
.|..+|+.+.... .+..... . -..+... +|.+.++..... .+.+|.++ +.-. ..+.. ......-+.
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~----~--i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~--~~~~~-~~~~i~~~~ 296 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHG----P--ISVLEFNDTNKLLLSASDDG--TLRIWHGGNGNSQ--NCFYG-HSQSIVSAS 296 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSS----C--EEEEEEETTTTEEEEEETTS--CEEEECSSSBSCS--EEECC-CSSCEEEEE
T ss_pred eEEEEEcCCCceeeeeccCCC----c--eEEEEECCCCCEEEEEcCCC--EEEEEECCCCccc--eEecC-CCccEEEEE
Confidence 3899999876432 2221111 1 1123333 566555555444 79999887 3222 22321 113345566
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.+++ .++.. ..++.+..||+++.+..
T Consensus 297 ~~~~~-~l~~~----------~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 297 WVGDD-KVISC----------SMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp EETTT-EEEEE----------ETTSEEEEEETTTTEEE
T ss_pred ECCCC-EEEEE----------eCCCcEEEEECCCCcEe
Confidence 67776 55555 36779999999988866
No 187
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=39.75 E-value=1.6e+02 Score=28.81 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=23.0
Q ss_pred cceeeCceEEEEEecCCCCCCccEEEEEECCCc--eeeE
Q 016752 205 DGTFADGHVHWLVTNNPKDDIENLIVAFNLESE--EFQE 241 (383)
Q Consensus 205 ~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e--~~~~ 241 (383)
.++..+|.+|...... .+.++|..+. .|+.
T Consensus 61 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRY 92 (668)
T ss_dssp CCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEE
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCChhceEE
Confidence 6788999999987554 4999998664 4654
No 188
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=39.20 E-value=1.8e+02 Score=24.89 Aligned_cols=67 Identities=9% Similarity=-0.124 Sum_probs=40.9
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|.+.+...... .+.+|-++ +.-....... ......-+.++++|..+... ..++.+..||+++++
T Consensus 138 ~~~~l~s~s~dg--~i~~wd~~~~~~~~~~~~~--~~~~i~~~~~~pdg~~lasg----------~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRG--TIGFQSYEDDSQYIVHSAK--SDVEYSSGVLHKDSLLLALY----------SPDGILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTC--CEEEEESSSSCEEEEECCC--SSCCCCEEEECTTSCEEEEE----------CTTSCEEEEESSCTT
T ss_pred CCCEEEEEeCCC--cEEEEECCCCcEEEEEecC--CCCceEEEEECCCCCEEEEE----------cCCCEEEEEECCCCC
Confidence 455655555444 79999998 4332222111 11234566777887766665 367789999998877
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 204 ~~ 205 (343)
T 3lrv_A 204 QA 205 (343)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=38.95 E-value=2.6e+02 Score=26.62 Aligned_cols=101 Identities=11% Similarity=-0.038 Sum_probs=61.3
Q ss_pred EEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEE
Q 016752 228 LIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 228 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 304 (383)
.|..+|..+.+. ..|+..... . .+... +|+..++..... .+.+|-+. ++-..+.+|.. +....-++
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p------~-~v~~SpDGr~lyv~~~dg--~V~viD~~~~t~~~v~~i~~--G~~P~~ia 246 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAV------H-ISRLSASGRYLFVIGRDG--KVNMIDLWMKEPTTVAEIKI--GSEARSIE 246 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCE------E-EEEECTTSCEEEEEETTS--EEEEEETTSSSCCEEEEEEC--CSEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCc------c-ceEECCCCCEEEEEcCCC--eEEEEECCCCCCcEeEEEec--CCCCceeE
Confidence 599999988654 445543221 1 22332 566555554333 67777663 23344556654 34456677
Q ss_pred EE----eCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEe
Q 016752 305 YS----KSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 305 ~~----~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
++ ++|+.+++.. .....+.++|..|.+....+.+.
T Consensus 247 ~s~~~~pDGk~l~v~n---------~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGA---------YWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp ECCSTTCTTTEEEEEE---------EETTEEEEEETTTCCEEEEEECC
T ss_pred EccccCCCCCEEEEEE---------ccCCeEEEEECCCCcEEEEEecc
Confidence 77 4899999884 35678999999998877445443
No 190
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=38.81 E-value=1e+02 Score=27.61 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=37.0
Q ss_pred EeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccC-CCcEEEEEeCCCCeEEEEEEE
Q 016752 281 VLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDI-NRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 281 ~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~-~~~~~~~ydl~~~~~~~~v~~ 347 (383)
+.+ .....+.+|+. +....-+.+.++|+.+|+.. . .+..+-.+|+++.+....+..
T Consensus 298 ViD~~t~~vv~~i~v--g~~p~gi~~s~Dg~~l~va~---------~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 298 SVTASVGQTSGPISN--GHDSDAIIAAQDGASDNYAN---------SAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEESSSCCEEECCEE--EEEECEEEECCSSSCEEEEE---------ETTTTEEEEEESSSCEEEEECCC
T ss_pred EEECCCCeEEEEEEC--CCCcceEEECCCCCEEEEEc---------cCCCCeEEEEECCCCcEEEEEEC
Confidence 666 55566666653 23333456667888777773 2 367999999999998855443
No 191
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=38.64 E-value=2e+02 Score=25.15 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=34.6
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK 283 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~ 283 (383)
+|.+-..+..+. .|..+|+.+.+....-+..+. .. -..+... +|++.+..+... ++.||.+.
T Consensus 280 dg~~lasgs~D~------~V~iwd~~~~~~~~~~~~gH~---~~-V~~v~fSpdg~~laS~S~D~--tvrvw~ip 342 (365)
T 4h5i_A 280 KGELAVLASNDN------SIALVKLKDLSMSKIFKQAHS---FA-ITEVTISPDSTYVASVSAAN--TIHIIKLP 342 (365)
T ss_dssp TSCEEEEEETTS------CEEEEETTTTEEEEEETTSSS---SC-EEEEEECTTSCEEEEEETTS--EEEEEECC
T ss_pred CCCceEEEcCCC------EEEEEECCCCcEEEEecCccc---CC-EEEEEECCCCCEEEEEeCCC--eEEEEEcC
Confidence 666554444432 388999988764322111111 11 1133443 677766666555 89999985
No 192
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=37.98 E-value=2.1e+02 Score=25.11 Aligned_cols=188 Identities=10% Similarity=0.063 Sum_probs=95.7
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
.+.|++... ..+...++.+.....+-.. .....++.+|+..+ +++.... ....+..++..+..
T Consensus 44 ~~~ll~~~~-~~I~~i~~~g~~~~~~~~~--------~~~~~~l~~d~~~~--~ly~~D~------~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 44 EPVLLFANR-IDIRQVLPHRSEYTLLLNN--------LENAIALDFHHRRE--LVFWSDV------TLDRILRANLNGSN 106 (349)
T ss_dssp CCEEEEECB-SCEEEECTTSCCEEEEECS--------CSCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCS
T ss_pred CceeEeecc-cceEEEeCCCCeeEEeecC--------CCceEEEEEecccc--EEEEEec------cCCceEEEecCCCC
Confidence 555555543 3466777766655443221 11345788887554 3433321 23456666666554
Q ss_pred eEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CC
Q 016752 189 WRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SG 263 (383)
Q Consensus 189 Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G 263 (383)
-+.+. ... . ....++.+ +|.|||...... .|.++|+....-..+. ..... . ...+++. +|
T Consensus 107 ~~~~~-~~~--~-~~p~glavd~~~g~ly~~d~~~~------~I~~~~~dG~~~~~l~-~~~l~-~---P~~iavdp~~g 171 (349)
T 3v64_C 107 VEEVV-STG--L-ESPGGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSLE-K---PRAIALHPMEG 171 (349)
T ss_dssp CEEEE-CSS--C-SCCCEEEEETTTTEEEEEETTTT------EEEEEETTSCSCEEEE-CTTCS-C---EEEEEEETTTT
T ss_pred ceEEE-eCC--C-CCccEEEEecCCCeEEEEcCCCC------eEEEEcCCCCceEEEE-eCCCC-C---cceEEEecCcC
Confidence 43332 110 0 11134443 689999875433 5999999766544332 11111 1 1234554 67
Q ss_pred eEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEE--EeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 264 CLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAY--SKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 264 ~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~--~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
.|++...... ..+....++++-.+ .+-. .....|.|+ ..+++.||+.+ .....+..+|+.....
T Consensus 172 ~ly~td~~~~-~~I~r~~~dG~~~~--~~~~--~~~~~PnGla~d~~~~~lY~aD---------~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 172 TIYWTDWGNT-PRIEASSMDGSGRR--IIAD--THLFWPNGLTIDYAGRRMYWVD---------AKHHVIERANLDGSHR 237 (349)
T ss_dssp EEEEEECSSS-CEEEEEETTSCSCE--ESCC--SSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSC
T ss_pred eEEEeccCCC-CEEEEEeCCCCCcE--EEEE--CCCCCcceEEEeCCCCEEEEEE---------CCCCEEEEEeCCCCce
Confidence 7887765331 13433333443221 1111 112335444 44577888884 4566888888877554
Q ss_pred E
Q 016752 342 A 342 (383)
Q Consensus 342 ~ 342 (383)
+
T Consensus 238 ~ 238 (349)
T 3v64_C 238 K 238 (349)
T ss_dssp E
T ss_pred E
Confidence 4
No 193
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=37.56 E-value=2e+02 Score=24.74 Aligned_cols=110 Identities=10% Similarity=0.092 Sum_probs=58.1
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE-ECCeEEEEEecCCCCcEEEEEeC-Ccee
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLK-GCWT 287 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~l~iW~l~-~~W~ 287 (383)
+|.+||...... .|..+|+.++....+..|... ..++. -+|++.+.. .. .+.+|-.+ ++..
T Consensus 60 ~~~l~~~d~~~~------~i~~~d~~~~~~~~~~~~~~v-------~~i~~~~dg~l~v~~--~~--gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 60 SGTAWWFNILER------ELHELHLASGRKTVHALPFMG-------SALAKISDSKQLIAS--DD--GLFLRDTATGVLT 122 (326)
T ss_dssp TTEEEEEEGGGT------EEEEEETTTTEEEEEECSSCE-------EEEEEEETTEEEEEE--TT--EEEEEETTTCCEE
T ss_pred CCEEEEEECCCC------EEEEEECCCCcEEEEECCCcc-------eEEEEeCCCeEEEEE--CC--CEEEEECCCCcEE
Confidence 378999875543 499999999887777655321 12333 468877664 22 44444444 5544
Q ss_pred eeEEEcCCCC-ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 288 KAFSFHRSVG-DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 288 ~~~~i~~~~~-~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
.......... ....-+.+.++|. +++...... .......++.|| +++++
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~---~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRK---AETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSC-EEEEEEETT---CCTTCEEEEEEE--TTEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCc---CCCCceEEEEEe--CCcEE
Confidence 3322211111 2234455566665 566531000 001235788888 56665
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=36.59 E-value=1.8e+02 Score=23.97 Aligned_cols=188 Identities=13% Similarity=0.107 Sum_probs=94.3
Q ss_pred CcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
..+|-+.+.. ....+.++||. ++...++.+.. .....++..|+.. . +.... . ....+..|+..
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~------~~~~~~i~~~~~g-~--l~v~~----~--~~~~v~~~d~~ 91 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP------DAKVMCLIVSSLG-D--IWFTE----N--GANKIGKLSKK 91 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSST------TCCEEEEEECTTS-C--EEEEE----T--TTTEEEEECTT
T ss_pred CCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC------CCcceeEEECCCC-C--EEEEe----c--CCCeEEEECCC
Confidence 3456555554 45678899998 76665443221 1223356666432 2 22222 0 13456777777
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE-EC
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN-FS 262 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~ 262 (383)
+.++... .+... ....++.+ +|.+|+..... ..|..+|.. .+...+.+|.... . ...+.. .+
T Consensus 92 -g~~~~~~--~~~~~-~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~~~~-~---~~~i~~d~~ 156 (300)
T 2qc5_A 92 -GGFTEYP--LPQPD-SGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYDLPNKGS-Y---PAFITLGSD 156 (300)
T ss_dssp -SCEEEEE--CSSTT-CCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEECSSTTC-C---EEEEEECTT
T ss_pred -CCeEEec--CCCCC-CCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEccCCCCCC-C---ceeEEECCC
Confidence 6665443 11100 00123333 57777654322 249999998 6666665553221 1 123444 35
Q ss_pred CeEEEEEecCCCCcEEEEEeC--CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 263 GCLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
|+|++...... .|+.++ ++... ..++... ....-+.+.++| .+++.. .....+..||+ +++
T Consensus 157 g~l~v~~~~~~----~i~~~~~~g~~~~-~~~~~~~-~~~~~i~~d~~g-~l~v~~---------~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 157 NALWFTENQNN----SIGRITNTGKLEE-YPLPTNA-AAPVGITSGNDG-ALWFVE---------IMGNKIGRITT-TGE 219 (300)
T ss_dssp SSEEEEETTTT----EEEEECTTCCEEE-EECSSTT-CCEEEEEECTTS-SEEEEE---------TTTTEEEEECT-TCC
T ss_pred CCEEEEecCCC----eEEEECCCCcEEE-eeCCCCC-CCcceEEECCCC-CEEEEc---------cCCCEEEEEcC-CCc
Confidence 78777664322 345554 44432 2222111 223334444455 467763 34567899998 555
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
+.
T Consensus 220 ~~ 221 (300)
T 2qc5_A 220 IS 221 (300)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 195
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=36.52 E-value=2e+02 Score=24.59 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=63.6
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCc--eeeEecCCCc--CCcCCee-eeEEEEE--CCeEEEEEe-cCCCCcEEEEE
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESE--EFQEVPLPHL--EDKKNVL-VMFVGNF--SGCLYFSCL-CNYPQPVDIWV 281 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e--~~~~i~~P~~--~~~~~~~-~~~L~~~--~G~L~~~~~-~~~~~~l~iW~ 281 (383)
+|.+|+..... ..|..||.... ....+.-+.. .....+. ...++.. +|.|++... ... .+.+|.
T Consensus 101 ~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~--~I~~~~ 172 (329)
T 3fvz_A 101 DGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS--RIVQFS 172 (329)
T ss_dssp TSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC--EEEEEC
T ss_pred CCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC--eEEEEc
Confidence 68877665433 25999998766 3444432111 0000000 2245555 688888875 333 666666
Q ss_pred eCCceeeeEEEcCC-----CCceeEE--EEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 282 LKGCWTKAFSFHRS-----VGDYVKA--LAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 282 l~~~W~~~~~i~~~-----~~~~~~~--~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.++.......-.-. .+....| +++.++++.||+.. .....+..||++++++...+
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d---------~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD---------RENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE---------CCCCEEEEEECCCCcEEEEE
Confidence 44443332211110 1122234 45556657888884 46778999999966555244
No 196
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=36.28 E-value=2.1e+02 Score=24.73 Aligned_cols=106 Identities=11% Similarity=0.019 Sum_probs=58.2
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--CCeEEEEEecCCCCcEEEEEeC--Cc
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLK--GC 285 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~l~iW~l~--~~ 285 (383)
+|.+||...... .|.++|+....-..+.. .... .. ..+++. +|.|+....... -.|+..+ ++
T Consensus 90 ~g~ly~~d~~~~------~I~~~~~dG~~~~~l~~-~~~~-~P---~giavdp~~g~ly~td~~~~---~~I~r~~~dG~ 155 (318)
T 3sov_A 90 GEKLYWTDSETN------RIEVSNLDGSLRKVLFW-QELD-QP---RAIALDPSSGFMYWTDWGEV---PKIERAGMDGS 155 (318)
T ss_dssp TTEEEEEETTTT------EEEEEETTSCSCEEEEC-SSCS-SE---EEEEEEGGGTEEEEEECSSS---CEEEEEETTSC
T ss_pred CCeEEEEECCCC------EEEEEECCCCcEEEEEe-CCCC-Cc---cEEEEeCCCCEEEEEecCCC---CEEEEEEcCCC
Confidence 789999865432 59999997654433321 1111 11 234443 678877654322 2455554 43
Q ss_pred eeeeEEEcCCCCceeEEE--EEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 286 WTKAFSFHRSVGDYVKAL--AYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 286 W~~~~~i~~~~~~~~~~~--~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
-.+.. +.. ....|. ++..+++.||+.+ .....+..+|+.....+
T Consensus 156 ~~~~~-~~~---~l~~Pnglavd~~~~~lY~aD---------~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 156 SRFII-INS---EIYWPNGLTLDYEEQKLYWAD---------AKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp SCEEE-ECS---SCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCE
T ss_pred CeEEE-EEC---CCCCccEEEEeccCCEEEEEE---------CCCCEEEEEcCCCCceE
Confidence 33221 111 122344 4445578889884 45668888888765555
No 197
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=35.55 E-value=60 Score=23.75 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=29.8
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEE
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLV 167 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 167 (383)
.+++++|.|++| +|...... ..+.+.+..|...+.|.|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~g~~----gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRW--LPAGTGPQ----AFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSC--CBSSCSCC----CCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--eECCCCCC----CccEEEEEEeCCCCEEEEEEEE
Confidence 588999999996 45443210 2345678889888889998876
No 198
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=35.51 E-value=2.2e+02 Score=24.69 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=40.2
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCC---CceeEEEEEEeCCCEEEEEeccCCCccccCCC---cEEEEE
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSV---GDYVKALAYSKSEDKVLVDKFKYGEEDDDINR---WELYWY 334 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~---~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~---~~~~~y 334 (383)
+| +.++..... .+.+|-++ ..-.........- .....-+.+.+++..++.. ..+ +.+..|
T Consensus 197 ~~-~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~----------~~d~~~g~i~i~ 263 (397)
T 1sq9_A 197 RG-LIATGFNNG--TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA----------HDSNSFGCITLY 263 (397)
T ss_dssp TS-EEEEECTTS--EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE----------EEETTEEEEEEE
T ss_pred Cc-eEEEEeCCC--cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE----------ecCCCCceEEEE
Confidence 45 444443333 89999988 5433333220000 1335566777788876666 245 789999
Q ss_pred eCCCCeEE
Q 016752 335 DPQSQKAA 342 (383)
Q Consensus 335 dl~~~~~~ 342 (383)
|+++++..
T Consensus 264 d~~~~~~~ 271 (397)
T 1sq9_A 264 ETEFGERI 271 (397)
T ss_dssp ETTTCCEE
T ss_pred ECCCCccc
Confidence 99887755
No 199
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=35.46 E-value=2.4e+02 Score=25.18 Aligned_cols=192 Identities=9% Similarity=0.105 Sum_probs=92.0
Q ss_pred eEEEecCCCcEEEEcCCccce--eec-CCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 111 LIALKNDENGIAFWNPSTKEH--LIL-PKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~--~~L-P~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+|+.......+.||+..++.. ..+ +..... . .......+.+.+..+. .++... ....+.+|+.+++
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~-h~~~v~~v~~~p~~~~-~l~s~~-------~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFT--G-HTAVVEDVAWHLLHES-LFGSVA-------DDQKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEEC--C-CSSCEEEEEECSSCTT-EEEEEE-------TTSEEEEEETTCS
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeec--C-CCCCEeeeEEeCCCCC-EEEEEe-------CCCeEEEEECCCC
Confidence 666555567899999877321 111 110000 0 0223445667764443 333322 2467889998875
Q ss_pred c-eEEeccCCCeeeecCC--cceee--Cce-EEEEEecCCCCCCccEEEEEECCCce--eeEecCCCcCCcCCeeeeEEE
Q 016752 188 S-WRRIRVDFPYYILHGW--DGTFA--DGH-VHWLVTNNPKDDIENLIVAFNLESEE--FQEVPLPHLEDKKNVLVMFVG 259 (383)
Q Consensus 188 ~-Wr~~~~~~p~~~~~~~--~~v~~--~G~-lywl~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~ 259 (383)
. .+... .. . .... ..+.+ +|. ++..+.... .|..+|+.+.. ...+.... .. -..+.
T Consensus 265 ~~~~~~~-~~--~-~~~~~v~~i~~~p~~~~~l~tg~~dg------~v~vwd~~~~~~~~~~~~~h~----~~--v~~i~ 328 (430)
T 2xyi_A 265 NTSKPSH-TV--D-AHTAEVNCLSFNPYSEFILATGSADK------TVALWDLRNLKLKLHSFESHK----DE--IFQVQ 328 (430)
T ss_dssp CSSSCSE-EE--E-CCSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTTSCSEEEECCS----SC--EEEEE
T ss_pred CCCccee-Ee--e-cCCCCeEEEEeCCCCCCEEEEEeCCC------eEEEEeCCCCCCCeEEeecCC----CC--EEEEE
Confidence 2 11110 00 0 0000 22333 243 444444332 48899987632 22222111 11 11223
Q ss_pred EE-CC-eEEEEEecCCCCcEEEEEeC--Cce-----------eeeEEEcCCCCceeEEEEEEeCCC-EEEEEeccCCCcc
Q 016752 260 NF-SG-CLYFSCLCNYPQPVDIWVLK--GCW-----------TKAFSFHRSVGDYVKALAYSKSED-KVLVDKFKYGEED 323 (383)
Q Consensus 260 ~~-~G-~L~~~~~~~~~~~l~iW~l~--~~W-----------~~~~~i~~~~~~~~~~~~~~~~g~-~v~l~~~~~~~~~ 323 (383)
.. +| .+.+...... .+.||-+. +.- ........ -.....-+.+++++. .++-.
T Consensus 329 ~sp~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~-------- 397 (430)
T 2xyi_A 329 WSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSV-------- 397 (430)
T ss_dssp ECSSCTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEE--------
T ss_pred ECCCCCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEE--------
Confidence 22 34 4555555444 79999987 211 12222211 113355667777776 44444
Q ss_pred ccCCCcEEEEEeCCCCeEE
Q 016752 324 DDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 324 ~~~~~~~~~~ydl~~~~~~ 342 (383)
..++.+.+|++.++.+.
T Consensus 398 --s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 398 --SEDNIMQVWQMAENVYN 414 (430)
T ss_dssp --ETTSEEEEEEECHHHHC
T ss_pred --ECCCCEEEeEccccccc
Confidence 36778999998776655
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=35.13 E-value=1.9e+02 Score=23.88 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=52.4
Q ss_pred EEEEEECCCcee-eEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEE
Q 016752 228 LIVAFNLESEEF-QEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALA 304 (383)
Q Consensus 228 ~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 304 (383)
.|..+|+.+.+. ..+..+.. . -..+... +|.|. ....+. .+.+|-++ ++-........ ....-+.
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~----~--i~~~~~~~~~~l~-~~~~dg--~v~iwd~~~~~~~~~~~~~~---~~i~~~~ 273 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHES----F--VYCIKLLPNGDIV-SCGEDR--TVRIWSKENGSLKQVITLPA---ISIWSVD 273 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSS----C--EEEEEECTTSCEE-EEETTS--EEEEECTTTCCEEEEEECSS---SCEEEEE
T ss_pred eEEEEECCchhhhhhhhcCCc----e--EEEEEEecCCCEE-EEecCC--EEEEEECCCCceeEEEeccC---ceEEEEE
Confidence 488999986543 23332211 1 1123333 45433 333333 89999887 54333332221 2355566
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
+.++|. ++.. ..++.+..||++++++.
T Consensus 274 ~~~~~~-~~~~----------~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 274 CMSNGD-IIVG----------SSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp ECTTSC-EEEE----------ETTSCEEEEESCGGGCC
T ss_pred EccCCC-EEEE----------eCCCcEEEEeCCCCcee
Confidence 777776 4444 36788999999998877
No 201
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=34.74 E-value=2.1e+02 Score=24.27 Aligned_cols=63 Identities=10% Similarity=0.201 Sum_probs=35.8
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCc
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNS 188 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~ 188 (383)
+|+....+..+.|||..+++....-... ......+.+.|..+.+-+ ... ....+.+|+..++.
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~l~-s~~-------~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGH-------GNAINELKFHPRDPNLLL-SVS-------KDHALRLWNIQTDT 149 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESC-------CSCEEEEEECSSCTTEEE-EEE-------TTSCEEEEETTTTE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCC-------CCcEEEEEECCCCCCEEE-EEe-------CCCeEEEEEeecCe
Confidence 4444445668999999887765332211 123445667764444332 222 23467888888764
No 202
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=33.92 E-value=2.1e+02 Score=24.06 Aligned_cols=183 Identities=10% Similarity=0.034 Sum_probs=86.4
Q ss_pred eEEEecCCCcEEEEcCCccc----eeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc-C
Q 016752 111 LIALKNDENGIAFWNPSTKE----HLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL-R 185 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss-~ 185 (383)
+|+....+..+.|||..+++ ...+... ......+.+.+. +.+.++... ....+.+|+. .
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~-~~~~l~~~~-------~dg~i~~wd~~~ 88 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--------KHPLLCCNFIDN-TDLQIYVGT-------VQGEILKVDLIG 88 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEEEEC--------SSCEEEEEEEES-SSEEEEEEE-------TTSCEEEECSSS
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceeeeec--------CCceEEEEECCC-CCcEEEEEc-------CCCeEEEEEecc
Confidence 44444455678888887776 3332211 122334556653 442333332 2346788888 7
Q ss_pred CCceEEeccC-CCeeeecCCcceeeC-ceEEEEEecCCCCCCccEEEEEECCC---------cee-eEecCCCcCCcCCe
Q 016752 186 SNSWRRIRVD-FPYYILHGWDGTFAD-GHVHWLVTNNPKDDIENLIVAFNLES---------EEF-QEVPLPHLEDKKNV 253 (383)
Q Consensus 186 ~~~Wr~~~~~-~p~~~~~~~~~v~~~-G~lywl~~~~~~~~~~~~il~fD~~~---------e~~-~~i~~P~~~~~~~~ 253 (383)
++.-...... ..... ..+.+. |.....+..+ ..|..+|+.+ .+. ..+.. ...
T Consensus 89 ~~~~~~~~~~~~~~~v----~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~ 152 (342)
T 1yfq_A 89 SPSFQALTNNEANLGI----CRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKV------KNK 152 (342)
T ss_dssp SSSEEECBSCCCCSCE----EEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSS------CCC
T ss_pred CCceEeccccCCCCce----EEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEee------CCc
Confidence 7765444310 11100 122221 3333333332 2478888764 221 11111 111
Q ss_pred eeeEEEEECCeEEEEEecCCCCcEEEEEeCCceee-eEEEcCCCCceeEEEEEEe-CCCEEEEEeccCCCccccCCCcEE
Q 016752 254 LVMFVGNFSGCLYFSCLCNYPQPVDIWVLKGCWTK-AFSFHRSVGDYVKALAYSK-SEDKVLVDKFKYGEEDDDINRWEL 331 (383)
Q Consensus 254 ~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~~~W~~-~~~i~~~~~~~~~~~~~~~-~g~~v~l~~~~~~~~~~~~~~~~~ 331 (383)
-..+....+. .++..... .+.+|-++..... ..............+.+.+ +++.++.. ..++.+
T Consensus 153 -v~~~~~~~~~-l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~----------~~dg~i 218 (342)
T 1yfq_A 153 -IFTMDTNSSR-LIVGMNNS--QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS----------SIDGRV 218 (342)
T ss_dssp -EEEEEECSSE-EEEEESTT--EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE----------ETTSEE
T ss_pred -eEEEEecCCc-EEEEeCCC--eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE----------ecCCcE
Confidence 1233333444 33333333 7999998731111 1111111123355667777 77777666 367778
Q ss_pred EEEeCCCC
Q 016752 332 YWYDPQSQ 339 (383)
Q Consensus 332 ~~ydl~~~ 339 (383)
..||..++
T Consensus 219 ~i~~~~~~ 226 (342)
T 1yfq_A 219 AVEFFDDQ 226 (342)
T ss_dssp EEEECCTT
T ss_pred EEEEEcCC
Confidence 88787665
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=33.80 E-value=2e+02 Score=23.67 Aligned_cols=194 Identities=12% Similarity=0.056 Sum_probs=95.6
Q ss_pred CcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
..+|-+.+.. ....++++||. ++...++.+... ....++.+|+.. . +.... . ....+..|+..
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~------~~~~~i~~~~~g-~--l~v~~----~--~~~~i~~~~~~ 133 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD------SGPYGITEGLNG-D--IWFTQ----L--NGDRIGKLTAD 133 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT------CCEEEEEECSTT-C--EEEEE----T--TTTEEEEECTT
T ss_pred CCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC------CCCccceECCCC-C--EEEEc----c--CCCeEEEECCC
Confidence 3456555554 34678899988 666544332111 123356666532 2 22221 0 13356666665
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-C
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-S 262 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~ 262 (383)
+...... .+... ....++.+ +|.+|+..... ..|..||. +.++..+..|.... . ...+... +
T Consensus 134 -g~~~~~~--~~~~~-~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~-~---~~~i~~d~~ 198 (300)
T 2qc5_A 134 -GTIYEYD--LPNKG-SYPAFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAA-A---PVGITSGND 198 (300)
T ss_dssp -SCEEEEE--CSSTT-CCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC-C---EEEEEECTT
T ss_pred -CCEEEcc--CCCCC-CCceeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCC-C---cceEEECCC
Confidence 5544332 11100 00022333 57866654322 24999999 66666666654321 1 1234443 6
Q ss_pred CeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
|.|++...... .+.++..++..... .++... ....-+++.++|. |++.. .....+..||+ ++++.
T Consensus 199 g~l~v~~~~~~--~i~~~~~~g~~~~~-~~~~~~-~~~~~i~~d~~g~-l~v~~---------~~~~~i~~~~~-~g~~~ 263 (300)
T 2qc5_A 199 GALWFVEIMGN--KIGRITTTGEISEY-DIPTPN-ARPHAITAGKNSE-IWFTE---------WGANQIGRITN-DNTIQ 263 (300)
T ss_dssp SSEEEEETTTT--EEEEECTTCCEEEE-ECSSTT-CCEEEEEECSTTC-EEEEE---------TTTTEEEEECT-TSCEE
T ss_pred CCEEEEccCCC--EEEEEcCCCcEEEE-ECCCCC-CCceEEEECCCCC-EEEec---------cCCCeEEEECC-CCcEE
Confidence 78887664333 34444333443322 222111 2233344555654 77773 34578999999 45666
Q ss_pred EEEEE
Q 016752 343 DQVTI 347 (383)
Q Consensus 343 ~~v~~ 347 (383)
.+.+
T Consensus 264 -~~~~ 267 (300)
T 2qc5_A 264 -EYQL 267 (300)
T ss_dssp -EEEC
T ss_pred -EEEC
Confidence 5433
No 204
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=33.80 E-value=2e+02 Score=23.74 Aligned_cols=190 Identities=12% Similarity=0.050 Sum_probs=90.9
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
.+++|+....+..+.|||..+++....-.... .....+.+.+. +.+-+.+ . ....+.+|+..+.
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~~-~~~l~~~-~-------~dg~i~~~~~~~~ 91 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ-------GFLNSVCYDSE-KELLLFG-G-------KDTMINGVPLFAT 91 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSEEEEEEEECS-------SCEEEEEEETT-TTEEEEE-E-------TTSCEEEEETTCC
T ss_pred CCCEEEEEEcCCcEEEEECCCCEEEEEeecCC-------ccEEEEEECCC-CCEEEEe-c-------CCCeEEEEEeeec
Confidence 34555555556678999987776543322211 12334666663 3332222 1 1234556665442
Q ss_pred c-eEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEECCeEE
Q 016752 188 S-WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNFSGCLY 266 (383)
Q Consensus 188 ~-Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~ 266 (383)
. .+... .... ....-..+.++|.....+..+. .|..+| ..+....+..... ....+.....++.+.
T Consensus 92 ~~~~~~~-~~~~-~~~~i~~~~~~~~~l~~~~~d~------~i~~~d-~~~~~~~~~~~~~----~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 92 SGEDPLY-TLIG-HQGNVCSLSFQDGVVISGSWDK------TAKVWK-EGSLVYNLQAHNA----SVWDAKVVSFSENKF 158 (313)
T ss_dssp TTSCC-C-EECC-CSSCEEEEEEETTEEEEEETTS------EEEEEE-TTEEEEEEECCSS----CEEEEEEEETTTTEE
T ss_pred CCCCccc-chhh-cccCEEEEEecCCEEEEEeCCC------CEEEEc-CCcEEEecccCCC----ceeEEEEccCCCCEE
Confidence 1 11111 0000 0000134445666554444432 488888 2222222322211 110112222256666
Q ss_pred EEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 267 FSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 267 ~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
++..... .+.+|-.. .....+.........-+.+.+++. ++.. ..++.+..||+++++..
T Consensus 159 ~~~~~d~--~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~----------~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 159 LTASADK--TIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISC----------SNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp EEEETTS--CEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEE----------ETTSEEEEEETTTCCEE
T ss_pred EEEECCC--CEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEc----------cCCCeEEEEECCchhhh
Confidence 6665555 79999743 111222211123455666677665 5555 36778999999987765
No 205
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=33.60 E-value=3.9e+02 Score=27.05 Aligned_cols=189 Identities=11% Similarity=0.083 Sum_probs=93.3
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
+|.....+..+.|||..+.+....... ......+.|.+ ++ .++... ....+.+++..++.--
T Consensus 31 ~lAsgs~Dg~I~lw~~~~~~~~~~~~~--------~~~V~~l~fsp--g~-~L~S~s-------~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 31 LLAIATVTGEVHIYGQQQVEVVIKLED--------RSAIKEMRFVK--GI-YLVVIN-------AKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EEEEEETTSEEEEECSTTCEEEEECSS--------CCCEEEEEEET--TT-EEEEEE-------TTCEEEEEETTTCSEE
T ss_pred EEEEEeCCCEEEEEeCCCcEEEEEcCC--------CCCEEEEEEcC--CC-EEEEEE-------CcCeEEEEECCCCcEE
Confidence 444444456788888877665433211 12344577777 44 344433 2456888888776421
Q ss_pred EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCc-------CCcCCeeeeEEEEE
Q 016752 191 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHL-------EDKKNVLVMFVGNF 261 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~-------~~~~~~~~~~L~~~ 261 (383)
..- ..+... ..+.+ +|..-..+..+. .|..+|+.+........|.. ...... -..+...
T Consensus 93 ~~~-~~~~~V----~~v~~sp~g~~l~sgs~dg------~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~-V~sl~~s 160 (902)
T 2oaj_A 93 TTV-FVPGKI----TSIDTDASLDWMLIGLQNG------SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSP-IVSIQWN 160 (902)
T ss_dssp EEE-ECSSCE----EEEECCTTCSEEEEEETTS------CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCC-CCEEEEE
T ss_pred EEE-cCCCCE----EEEEECCCCCEEEEEcCCC------cEEEEECCCCccccceeccccccccccccCCCC-eEEEEEc
Confidence 110 000000 11211 343333333322 38889998876543222210 001111 1123333
Q ss_pred --CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCC-------------C--CceeEEEEEEeCCCEEEEEeccCCCcc
Q 016752 262 --SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRS-------------V--GDYVKALAYSKSEDKVLVDKFKYGEED 323 (383)
Q Consensus 262 --~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~-------------~--~~~~~~~~~~~~g~~v~l~~~~~~~~~ 323 (383)
++.+.++..... .+ ||-++ +.-.+....... - .....-+.++++|..|.-.
T Consensus 161 p~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-------- 229 (902)
T 2oaj_A 161 PRDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-------- 229 (902)
T ss_dssp TTEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE--------
T ss_pred cCCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE--------
Confidence 234555544443 78 99988 432222221100 0 0235566777888766665
Q ss_pred ccCCCcEEEEEeCCCCeEE
Q 016752 324 DDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 324 ~~~~~~~~~~ydl~~~~~~ 342 (383)
..++.+..||+++++..
T Consensus 230 --s~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 230 --HEDNSLVFWDANSGHMI 246 (902)
T ss_dssp --ETTCCEEEEETTTCCEE
T ss_pred --ECCCeEEEEECCCCcEE
Confidence 46778999999887654
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=32.34 E-value=2.5e+02 Score=27.47 Aligned_cols=30 Identities=10% Similarity=0.024 Sum_probs=22.7
Q ss_pred cceeeCceEEEEEecCCCCCCccEEEEEECCCc--eeeE
Q 016752 205 DGTFADGHVHWLVTNNPKDDIENLIVAFNLESE--EFQE 241 (383)
Q Consensus 205 ~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e--~~~~ 241 (383)
.++..+|.+|....... |.++|..+. .|+.
T Consensus 65 ~P~v~~g~vyv~~~~~~-------v~AlD~~tG~~~W~~ 96 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFSV-------VYALDARDGRLIWKY 96 (689)
T ss_dssp CCEEETTEEEEECGGGC-------EEEEETTTCCEEEEE
T ss_pred cCEEECCEEEEEcCCCe-------EEEEECCCCceeEEE
Confidence 67889999999765443 999998654 4664
No 207
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=32.33 E-value=2.8e+02 Score=24.86 Aligned_cols=193 Identities=10% Similarity=0.098 Sum_probs=95.0
Q ss_pred CcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 107 SCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
+.+|+++....+..+.|||..|++....-... ......+.+.+..+.-.++... ....+.+|+..+
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~~l~s~s-------~d~~i~vwd~~~ 236 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGH-------NSTVRCLDIVEYKNIKYIVTGS-------RDNTLHVWKLPK 236 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEEEESSSCEEEEEEE-------TTSCEEEEECCC
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEEEECCC-------CCccEEEEEecCCCCCEEEEEc-------CCCcEEEeeCCC
Confidence 44666666666778999999988765432211 1122334444433333333332 234567777776
Q ss_pred CceEEec---cCCC------------eeeecC-C---cceeeCceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCC
Q 016752 187 NSWRRIR---VDFP------------YYILHG-W---DGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPH 246 (383)
Q Consensus 187 ~~Wr~~~---~~~p------------~~~~~~-~---~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~ 246 (383)
+.-.... ...+ ...... . ..+..+|.....+..+. .|..+|+.+.+... +....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 237 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp CCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTS------CEEEEETTTTEEEEEECCCS
T ss_pred CcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCC
Confidence 5321110 0000 000000 0 22333454444443332 38899998765433 32211
Q ss_pred cCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccc
Q 016752 247 LEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDD 324 (383)
Q Consensus 247 ~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~ 324 (383)
. . -..+... +|...+...... .+.+|-++ +. ...++..- .....-+.+ +++.++..
T Consensus 311 ~----~--v~~~~~~~~~~~l~sg~~dg--~i~vwd~~~~~--~~~~~~~h-~~~v~~~~~--~~~~l~s~--------- 368 (464)
T 3v7d_B 311 D----R--IYSTIYDHERKRCISASMDT--TIRIWDLENGE--LMYTLQGH-TALVGLLRL--SDKFLVSA--------- 368 (464)
T ss_dssp S----C--EEEEEEETTTTEEEEEETTS--CEEEEETTTTE--EEEEECCC-SSCEEEEEE--CSSEEEEE---------
T ss_pred C----C--EEEEEEcCCCCEEEEEeCCC--cEEEEECCCCc--EEEEEeCC-CCcEEEEEE--cCCEEEEE---------
Confidence 1 1 1123333 566666665544 79999987 43 23333320 112223333 45666555
Q ss_pred cCCCcEEEEEeCCCCeEE
Q 016752 325 DINRWELYWYDPQSQKAA 342 (383)
Q Consensus 325 ~~~~~~~~~ydl~~~~~~ 342 (383)
..++.+..||+++.+..
T Consensus 369 -s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 369 -AADGSIRGWDANDYSRK 385 (464)
T ss_dssp -ETTSEEEEEETTTCCEE
T ss_pred -eCCCcEEEEECCCCcee
Confidence 36778999999887644
No 208
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=32.05 E-value=2.4e+02 Score=24.02 Aligned_cols=51 Identities=22% Similarity=0.267 Sum_probs=31.6
Q ss_pred EEEEEECCCceeeEecCCCcCC-cCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC
Q 016752 228 LIVAFNLESEEFQEVPLPHLED-KKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK 283 (383)
Q Consensus 228 ~il~fD~~~e~~~~i~~P~~~~-~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~ 283 (383)
.|..||...+....+..|.... .... .+...+|.|++...... .+....++
T Consensus 261 ~v~~~d~~G~~~~~~~~~~g~~~~~~~---~~~~~~g~L~v~~~~~~--~i~~~~~~ 312 (322)
T 2fp8_A 261 KGIKFDEFGNILEVIPLPPPFAGEHFE---QIQEHDGLLYIGTLFHG--SVGILVYD 312 (322)
T ss_dssp EEEEECTTSCEEEEEECCTTTTTSCCC---EEEEETTEEEEECSSCS--EEEEEEC-
T ss_pred EEEEECCCCCEEEEEECCCCCccccce---EEEEeCCEEEEeecCCC--ceEEEecc
Confidence 5999999888888888775431 1111 23446788887765443 55555544
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=31.22 E-value=2.6e+02 Score=24.16 Aligned_cols=120 Identities=15% Similarity=0.168 Sum_probs=62.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcC--CcCCee-eeEEEEE-CCeEEEEEecC---CCCcEEEEEe
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLE--DKKNVL-VMFVGNF-SGCLYFSCLCN---YPQPVDIWVL 282 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~--~~~~~~-~~~L~~~-~G~L~~~~~~~---~~~~l~iW~l 282 (383)
+|.+|......... . ..|..+| +.+. .++|... ...... -..+... +|+|+++.... ....+.+|-+
T Consensus 27 ~g~~~v~~~~~~~~-~-~~l~~~~--~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP-E-MQVAELT--QDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCC-S-CSEEEEE--TTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCC-c-eEEEEEC--CCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 67777654221100 0 2377777 4443 3555321 111110 1234443 58998887541 1125666666
Q ss_pred C-CceeeeEEEcCCC-C--ceeEEEEEEeCCCEEEEEeccCCCccccC---CCcEEEEEeCCCCeEEEEE
Q 016752 283 K-GCWTKAFSFHRSV-G--DYVKALAYSKSEDKVLVDKFKYGEEDDDI---NRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 283 ~-~~W~~~~~i~~~~-~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~---~~~~~~~ydl~~~~~~~~v 345 (383)
+ ++-.+...++... . ....-+.+..+++.+|+.. . ....++.||+++++.. ++
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd---------~~~~~~~~i~v~d~~~g~~~-r~ 160 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD---------PAPDDKAALIRVDLQTGLAA-RV 160 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE---------CCSGGGCEEEEEETTTCCEE-EE
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc---------CccCCCCeEEEEECCCCCEE-EE
Confidence 6 5434444443211 1 2334566665567888884 2 3568999999988776 53
No 210
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=31.14 E-value=2.2e+02 Score=25.28 Aligned_cols=68 Identities=9% Similarity=-0.039 Sum_probs=42.5
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
+|.+.+...... .+.+|-++ +.-........ -.....-+++.+++..++.. ..++.+..||+++++
T Consensus 181 ~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~----------~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNLS--RVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILG----------TTRGIIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETTS--EEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEE----------ETTSCEEEEETTTTE
T ss_pred CCCEEEEEeCCC--eEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEE----------cCCCeEEEEEcCCcc
Confidence 466666655544 89999987 43332222210 01335566677787776666 367789999999877
Q ss_pred EE
Q 016752 341 AA 342 (383)
Q Consensus 341 ~~ 342 (383)
..
T Consensus 248 ~~ 249 (437)
T 3gre_A 248 LI 249 (437)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 211
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=31.08 E-value=2.9e+02 Score=24.69 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=31.0
Q ss_pred ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEecc
Q 016752 298 DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGV 350 (383)
Q Consensus 298 ~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~ 350 (383)
++...+-+++.=+.||+. ++.+-++.||++|.+.-.+-.|.+.
T Consensus 260 DFPVamqvs~kygviyvi----------TK~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLI----------TKYGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp CCEEEEEEETTTTEEEEE----------ETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CceEEEEecccCCEEEEE----------eCCcEEEEEEcccCcEEEEeccCCC
Confidence 344455556555799998 4888999999999998844445543
No 212
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=30.05 E-value=4.1e+02 Score=26.19 Aligned_cols=126 Identities=14% Similarity=0.229 Sum_probs=66.9
Q ss_pred eeCceEEEEEecCC----CCCCccEEEEEECCC--------ceeeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCC
Q 016752 208 FADGHVHWLVTNNP----KDDIENLIVAFNLES--------EEFQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQ 275 (383)
Q Consensus 208 ~~~G~lywl~~~~~----~~~~~~~il~fD~~~--------e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~ 275 (383)
+.+|.+|......- .......|++.|+.+ ..|+.+-.|.... . --.+...++.|.+........
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-l~~~~~~~~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 297 SFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE---V-FNFISTTKDRVFLATYDNVVA 372 (711)
T ss_dssp EETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE---E-EEEEEECSSCEEEEEEETTEE
T ss_pred eECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC---e-EEEEEEECCEEEEEEEECCEE
Confidence 56888888653320 001223499999865 3677654443321 1 113455577887777666533
Q ss_pred cEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 276 PVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 276 ~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+.++.++ +.|.....+.+.-...........+++.+++..... .....++.||++ ++.+ .+
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~------~~P~~~~~~d~~-~~~~-~l 435 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENS------IVPPTIYLWVKT-HELK-II 435 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECS------SSCCEEEEECTT-SCEE-EE
T ss_pred EEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecC------CCCCEEEEEeCC-CcEE-EE
Confidence 45555555 778544324431111233333344556566652110 245689999987 6665 44
No 213
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=29.97 E-value=4.1e+02 Score=26.14 Aligned_cols=200 Identities=13% Similarity=0.095 Sum_probs=97.7
Q ss_pred cCeeEEEecCCCcEEEEcCCccceeecCCCCCC--CcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 108 CNGLIALKNDENGIAFWNPSTKEHLILPKFWGD--LKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 108 ~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~--~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
.+|-|-+......+..++|.++.+..+...+.. ...........+..|.... +.+.. ....+..|+..
T Consensus 322 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~----lWigt------~~~Gl~~~~~~ 391 (781)
T 3v9f_A 322 SFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK----LWIGT------DGGGINVFENG 391 (781)
T ss_dssp SSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC----EEEEE------BSSCEEEEETT
T ss_pred CCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC----EEEEe------CCCcEEEEECC
Confidence 345454454445688889988887766432110 0000012233455554221 22221 01234566666
Q ss_pred CCceEEeccCCCeeeecCC-cceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-
Q 016752 186 SNSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF- 261 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~-~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 261 (383)
++.++... . +....... .+++. +|.+ |++.... .+..||..++++..+..+ ...... -..+.+.
T Consensus 392 ~~~~~~~~-~-~~~~~~~~v~~i~~d~~g~l-Wigt~~~------Gl~~~~~~~~~~~~~~~~-~~~~~~--v~~i~~d~ 459 (781)
T 3v9f_A 392 KRVAIYNK-E-NRELLSNSVLCSLKDSEGNL-WFGTYLG------NISYYNTRLKKFQIIELE-KNELLD--VRVFYEDK 459 (781)
T ss_dssp EEEEECC-------CCCSBEEEEEECTTSCE-EEEETTE------EEEEECSSSCEEEECCST-TTCCCC--EEEEEECT
T ss_pred CCeEEEcc-C-CCCCCCcceEEEEECCCCCE-EEEeccC------CEEEEcCCCCcEEEeccC-CCCCCe--EEEEEECC
Confidence 65554321 1 11111111 22333 4554 5555432 499999999999887644 111111 1234444
Q ss_pred CCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcC-CC-CceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCC
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHR-SV-GDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQS 338 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~-~~-~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~ 338 (383)
+|.|.+... . .+..+..+ +.|........ .+ .....-+....+ +.|.+.. ....++.||+++
T Consensus 460 ~g~lwigt~--~--Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigt----------~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 460 NKKIWIGTH--A--GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE-GRFWIGT----------FGGGVGIYTPDM 524 (781)
T ss_dssp TSEEEEEET--T--EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT-CCEEEEE----------SSSCEEEECTTC
T ss_pred CCCEEEEEC--C--ceEEEeCCCCeEEecccCcccccccceeEEEEEcCC-CCEEEEE----------cCCCEEEEeCCC
Confidence 577777653 2 45555444 66665443221 11 122333333344 4578872 446799999999
Q ss_pred CeEEEEE
Q 016752 339 QKAADQV 345 (383)
Q Consensus 339 ~~~~~~v 345 (383)
++++ .+
T Consensus 525 ~~~~-~~ 530 (781)
T 3v9f_A 525 QLVR-KF 530 (781)
T ss_dssp CEEE-EE
T ss_pred CeEE-Ec
Confidence 9888 54
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=29.87 E-value=2.3e+02 Score=23.22 Aligned_cols=194 Identities=11% Similarity=0.035 Sum_probs=96.2
Q ss_pred CcCeeEEEec-CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNGLIALKN-DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
..+|-+.+.. ....++++||. ++...++.+.. .....++.+|+.. ++..... ....+.+|+.
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~------~~~~~~i~~~~~g---~l~v~~~------~~~~i~~~d~- 127 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP------DSAPYGITEGPNG---DIWFTEM------NGNRIGRITD- 127 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSST------TCCEEEEEECTTS---CEEEEET------TTTEEEEECT-
T ss_pred CCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc------CCCceeeEECCCC---CEEEEec------CCceEEEECC-
Confidence 3456555554 34578899986 44444432211 1123456667532 2222210 1345666776
Q ss_pred CCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-C
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-S 262 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~ 262 (383)
++...... .+... ....++.+ +|.+|+..... ..|..+|. ++++..+.+|.... . ...+... +
T Consensus 128 ~g~~~~~~--~~~~~-~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~--~--~~~i~~~~~ 193 (299)
T 2z2n_A 128 DGKIREYE--LPNKG-SYPSFITLGSDNALWFTENQN------NAIGRITE-SGDITEFKIPTPAS--G--PVGITKGND 193 (299)
T ss_dssp TCCEEEEE--CSSTT-CCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTC--C--EEEEEECTT
T ss_pred CCCEEEec--CCCCC-CCCceEEEcCCCCEEEEeCCC------CEEEEEcC-CCcEEEeeCCCCCC--c--ceeEEECCC
Confidence 55554432 11000 00123333 57777654332 24999999 77777665554321 1 1234443 5
Q ss_pred CeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAA 342 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~ 342 (383)
|.|++...... .+.+|..++.... ..++.. .....-+++.++|. +++.. .....+..||+ +++++
T Consensus 194 g~l~v~~~~~~--~i~~~~~~g~~~~-~~~~~~-~~~~~~i~~~~~g~-l~v~~---------~~~~~i~~~d~-~g~~~ 258 (299)
T 2z2n_A 194 DALWFVEIIGN--KIGRITTSGEITE-FKIPTP-NARPHAITAGAGID-LWFTE---------WGANKIGRLTS-NNIIE 258 (299)
T ss_dssp SSEEEEETTTT--EEEEECTTCCEEE-EECSST-TCCEEEEEECSTTC-EEEEE---------TTTTEEEEEET-TTEEE
T ss_pred CCEEEEccCCc--eEEEECCCCcEEE-EECCCC-CCCceeEEECCCCC-EEEec---------cCCceEEEECC-CCceE
Confidence 78876654333 4444444344322 222211 12233455555655 77773 35678999999 56666
Q ss_pred EEEEE
Q 016752 343 DQVTI 347 (383)
Q Consensus 343 ~~v~~ 347 (383)
.+.+
T Consensus 259 -~~~~ 262 (299)
T 2z2n_A 259 -EYPI 262 (299)
T ss_dssp -EEEC
T ss_pred -EEeC
Confidence 5543
No 215
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=29.28 E-value=2.7e+02 Score=23.75 Aligned_cols=69 Identities=7% Similarity=-0.010 Sum_probs=36.5
Q ss_pred EEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcCCCCc-eeEEEEEEe--CCCEEEEEeccCCCccccCCCcEEEEE
Q 016752 259 GNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGD-YVKALAYSK--SEDKVLVDKFKYGEEDDDINRWELYWY 334 (383)
Q Consensus 259 ~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~-~~~~~~~~~--~g~~v~l~~~~~~~~~~~~~~~~~~~y 334 (383)
....+.+.+...... .+.||..+ +.|.........-.. ....+.+.+ ++..|.-. ..++.+..|
T Consensus 257 ~~s~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~----------s~Dg~v~~W 324 (330)
T 2hes_X 257 AWGFNGLIASVGADG--VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG----------GDDGIVNFW 324 (330)
T ss_dssp EECTTSCEEEEETTS--CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE----------ETTSEEEEE
T ss_pred EEcCCCEEEEEeCCC--EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe----------cCCCcEEEE
Confidence 333444444444344 89999998 888765544221111 345566655 44444444 367789999
Q ss_pred eCCCC
Q 016752 335 DPQSQ 339 (383)
Q Consensus 335 dl~~~ 339 (383)
|+++.
T Consensus 325 ~~~~~ 329 (330)
T 2hes_X 325 SLEKA 329 (330)
T ss_dssp EC---
T ss_pred EeccC
Confidence 98753
No 216
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=28.65 E-value=1.2e+02 Score=23.90 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=27.4
Q ss_pred cEEEEcCCcc-ceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEE
Q 016752 120 GIAFWNPSTK-EHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLV 167 (383)
Q Consensus 120 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 167 (383)
.+++.||.|+ .|+..-.. . ..+.+-+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~--------~-~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKH--------A-VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEESCSS--------C-EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceeecCCC--------C-eEEEEEEcCCCCEEEEEEcc
Confidence 5899999997 77543222 1 24456688888889999865
No 217
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=28.41 E-value=2.7e+02 Score=23.50 Aligned_cols=106 Identities=12% Similarity=-0.026 Sum_probs=55.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE----CCeEEEEEecCCCCcEEEEEeC-C
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF----SGCLYFSCLCNYPQPVDIWVLK-G 284 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~----~G~L~~~~~~~~~~~l~iW~l~-~ 284 (383)
+|.+...+.... .|..+|+.+.......... .. -..+... +|...++..... .+.+|-++ +
T Consensus 179 ~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~----~~--v~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~ 244 (357)
T 3i2n_A 179 EERVVCAGYDNG------DIKLFDLRNMALRWETNIK----NG--VCSLEFDRKDISMNKLVATSLEG--KFHVFDMRTQ 244 (357)
T ss_dssp CCCEEEEEETTS------EEEEEETTTTEEEEEEECS----SC--EEEEEESCSSSSCCEEEEEESTT--EEEEEEEEEE
T ss_pred CCCEEEEEccCC------eEEEEECccCceeeecCCC----Cc--eEEEEcCCCCCCCCEEEEECCCC--eEEEEeCcCC
Confidence 555554444432 4899999887754332111 11 1123333 566666665444 89999987 2
Q ss_pred ceeeeE---EEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCC
Q 016752 285 CWTKAF---SFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQ 339 (383)
Q Consensus 285 ~W~~~~---~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~ 339 (383)
.=.... .+.. -.....-+.+.++|..+++.. ..++.+..||+++.
T Consensus 245 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~---------~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 245 HPTKGFASVSEKA-HKSTVWQVRHLPQNRELFLTA---------GGAGGLHLWKYEYP 292 (357)
T ss_dssp ETTTEEEEEEEEC-CSSCEEEEEEETTEEEEEEEE---------ETTSEEEEEEEECC
T ss_pred CcccceeeeccCC-CcCCEEEEEECCCCCcEEEEE---------eCCCcEEEeecCCC
Confidence 111111 1111 113355566677665334431 35678888998754
No 218
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=28.39 E-value=2.7e+02 Score=23.51 Aligned_cols=104 Identities=12% Similarity=0.090 Sum_probs=57.4
Q ss_pred CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCCCCcEEEEEeC---Cc
Q 016752 210 DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLK---GC 285 (383)
Q Consensus 210 ~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~---~~ 285 (383)
+|.+||...... .|..+|..++.-..+..+.. -..++.. +|+|+++..... ...|+.++ ++
T Consensus 42 ~g~lyv~d~~~~------~I~~~d~~g~~~~~~~~~~~-------p~gia~~~dG~l~vad~~~~--~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 42 DGTIFVTNHEVG------EIVSITPDGNQQIHATVEGK-------VSGLAFTSNGDLVATGWNAD--SIPVVSLVKSDGT 106 (306)
T ss_dssp TSCEEEEETTTT------EEEEECTTCCEEEEEECSSE-------EEEEEECTTSCEEEEEECTT--SCEEEEEECTTSC
T ss_pred CCCEEEEeCCCC------eEEEECCCCceEEEEeCCCC-------ceeEEEcCCCcEEEEeccCC--cceEEEEcCCCCe
Confidence 788999864432 49999998765444554421 1134443 688877664332 34566654 55
Q ss_pred eeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 286 WTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
......++. . ....-.+++. ++.+++.. .....++.+|+.+++
T Consensus 107 ~~~~~~~~~-~-~~~~g~~~~~-~~~~~v~d---------~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 107 VETLLTLPD-A-IFLNGITPLS-DTQYLTAD---------SYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTT-C-SCEEEEEESS-SSEEEEEE---------TTTTEEEEEETTTTE
T ss_pred EEEEEeCCC-c-cccCcccccC-CCcEEEEE---------CCCCeEEEEeCCCCc
Confidence 544333321 1 1111222333 45666663 346689999988754
No 219
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=27.66 E-value=3.7e+02 Score=24.91 Aligned_cols=187 Identities=10% Similarity=0.046 Sum_probs=0.0
Q ss_pred CcCeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCc-ccEEEEEEcC
Q 016752 107 SCNGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVE-YTEVSVYSLR 185 (383)
Q Consensus 107 s~~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~-~~~~~vyss~ 185 (383)
+.+|.+++......+.+++..+++....-.. ......+.+. .-.++... . ...+.+|+..
T Consensus 415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~l~~~~-------~~d~~i~~~~~~ 475 (615)
T 1pgu_A 415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRL--------NSPGSAVSLS----QNYVAVGL-------EEGNTIQVFKLS 475 (615)
T ss_dssp CSSSEEEEEETTSEEEEEETTTCCEEEEEEC--------SSCEEEEEEC----SSEEEEEE-------TTTSCEEEEETT
T ss_pred cCCCCEEEEeCCCceEEEeccCCceeeeccc--------CCCceEEEEc----CCEEEEee-------cCCCeEEEEECC
Q ss_pred CCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCC-CcCCcCCeeeeEEEEE---
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLP-HLEDKKNVLVMFVGNF--- 261 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P-~~~~~~~~~~~~L~~~--- 261 (383)
++.... ............-...-+|.+-..+..+.. |..+|+.+.+....... ... .+.-...
T Consensus 476 ~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~------i~iw~~~~~~~~~~~~~~h~~------~v~~~~~sp~ 542 (615)
T 1pgu_A 476 DLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGK------ILLYDLQSREVKTSRWAFRTS------KINAISWKPA 542 (615)
T ss_dssp EEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSC------EEEEETTTTEEEECCSCCCSS------CEEEEEECCC
T ss_pred Cccccc-cccCCccCceEEEEECCCCCEEEEcCCCCe------EEEeeCCCCcceeEeecCCCC------ceeEEEEcCc
Q ss_pred ---------CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEE
Q 016752 262 ---------SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELY 332 (383)
Q Consensus 262 ---------~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~ 332 (383)
+|++.+...... .+.||.++..-.....+.. -.....-+.+.++|. |+.. ..++.+.
T Consensus 543 ~~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s~----------~~d~~v~ 608 (615)
T 1pgu_A 543 EKGANEEEIEEDLVATGSLDT--NIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSS----------GADACIK 608 (615)
T ss_dssp C------CCSCCEEEEEETTS--CEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEE----------ETTSCEE
T ss_pred cccccccccCCCEEEEEcCCC--cEEEEECCCCceechhhhc-CccceEEEEEcCCCC-eEEe----------cCCceEE
Q ss_pred EEeCCCC
Q 016752 333 WYDPQSQ 339 (383)
Q Consensus 333 ~ydl~~~ 339 (383)
.||++++
T Consensus 609 iw~~~~~ 615 (615)
T 1pgu_A 609 RWNVVLE 615 (615)
T ss_dssp EEEEC--
T ss_pred EEeeecC
No 220
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=27.03 E-value=3e+02 Score=27.01 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=30.0
Q ss_pred ccEEEEEEcCCCceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCcee
Q 016752 176 YTEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEEF 239 (383)
Q Consensus 176 ~~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~ 239 (383)
...+++|+.....-+.+. ..+..+.....-....+.+||...... .|.++|..+.+.
T Consensus 561 ~~~I~~~d~dG~~~~~~~-~~~~~~~~P~glavd~~~lywtd~~~~------~V~~~d~~~G~~ 617 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINE------AIFSANRLTGSD 617 (699)
T ss_dssp TTEEEEECSSSSCCEEEC-CCSSSCSSCCCCEEETTEEEEECSTTT------CEEEEETTTEEE
T ss_pred CCeEEEEccCCCceEEEE-ecCCcCCCceEeEEECCEEEEEeCCCC------eEEEEEccCCCc
Confidence 456777777543333332 111111111122334668999875433 399999876554
No 221
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.53 E-value=1.1e+02 Score=22.64 Aligned_cols=42 Identities=7% Similarity=-0.138 Sum_probs=25.6
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEee---ecCCCCEEEEEEE
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGY---DAVNDDYKVFRLV 167 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~---d~~~~~ykVv~~~ 167 (383)
.++++||.|+.|...-.. .. ....+.+.. |...+.|+|+...
T Consensus 21 ~Vm~~D~~~~~W~p~~~g--~l----s~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWFPQEGG--GI----SRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSEECSCC--SC----EEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEeeCCCC--Cc----ccEEEEEecCCCCCCCCEEEEEEEE
Confidence 588999999988544432 11 112223333 4566789998875
No 222
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=25.92 E-value=3.3e+02 Score=23.69 Aligned_cols=140 Identities=5% Similarity=-0.074 Sum_probs=69.4
Q ss_pred cEEEEEEcCCCceEEeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCee
Q 016752 177 TEVSVYSLRSNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVL 254 (383)
Q Consensus 177 ~~~~vyss~~~~Wr~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 254 (383)
..+.|++..++.-...- ..... -..|.+ +|.+...+..+. +..++..+............. ...
T Consensus 157 ~~i~iwd~~~~~~~~~~-~~~~~----V~~v~fspdg~~l~s~s~~~-------~~~~~~~~~~~~~~~~~~~~~-~~v- 222 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEI-ETRGE----VKDLHFSTDGKVVAYITGSS-------LEVISTVTGSCIARKTDFDKN-WSL- 222 (365)
T ss_dssp CEEEEEETTTTEEEEEE-ECSSC----CCEEEECTTSSEEEEECSSC-------EEEEETTTCCEEEEECCCCTT-EEE-
T ss_pred CEEEEeECCCCcEEEEe-CCCCc----eEEEEEccCCceEEecccee-------EEEEEeccCcceeeeecCCCC-CCE-
Confidence 46777887776533221 11000 022222 555444443322 777777766544322211110 111
Q ss_pred eeEEEE-ECCeEEEEEecCCCCcEE--EEEeC-Cceeee--EEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCC
Q 016752 255 VMFVGN-FSGCLYFSCLCNYPQPVD--IWVLK-GCWTKA--FSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINR 328 (383)
Q Consensus 255 ~~~L~~-~~G~L~~~~~~~~~~~l~--iW~l~-~~W~~~--~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~ 328 (383)
..+.. -+|...+.........+. +|.+. ..+... ..+.. -...+.-++++++|..|... ..+
T Consensus 223 -~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasg----------s~D 290 (365)
T 4h5i_A 223 -SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLA----------SND 290 (365)
T ss_dssp -EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEE----------ETT
T ss_pred -EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEE----------cCC
Confidence 12222 367666665544322344 44444 333222 22322 11335567788898877776 367
Q ss_pred cEEEEEeCCCCeEE
Q 016752 329 WELYWYDPQSQKAA 342 (383)
Q Consensus 329 ~~~~~ydl~~~~~~ 342 (383)
+.+..||+++.+..
T Consensus 291 ~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 291 NSIALVKLKDLSMS 304 (365)
T ss_dssp SCEEEEETTTTEEE
T ss_pred CEEEEEECCCCcEE
Confidence 78999999998765
No 223
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=25.49 E-value=2.9e+02 Score=22.98 Aligned_cols=61 Identities=3% Similarity=-0.147 Sum_probs=36.4
Q ss_pred cEEEEEeC-CceeeeEEEcCCCCc-eeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEE
Q 016752 276 PVDIWVLK-GCWTKAFSFHRSVGD-YVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 276 ~l~iW~l~-~~W~~~~~i~~~~~~-~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
.+.+|-++ ++- ..++...-.. ...-+.+.++|+.+++.. ..+..+..||+.+++....+..
T Consensus 12 ~v~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 12 KLVVIDTEKMAV--DKVITIADAGPTPMVPMVAPGGRIAYATV---------NKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEETTTTEE--EEEEECTTCTTCCCCEEECTTSSEEEEEE---------TTTTEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCcE--EEEEEcCCCCCCccceEEcCCCCEEEEEe---------CCCCeEEEEECCCCCeEeeEEc
Confidence 66777665 332 2333321000 234567778888888773 3466899999998887634443
No 224
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=25.47 E-value=98 Score=22.70 Aligned_cols=42 Identities=14% Similarity=-0.078 Sum_probs=21.6
Q ss_pred cEEEEcCCccceeecCCCCCCCcCccceeEEEEee---ecCCCCEEEEEEE
Q 016752 120 GIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGY---DAVNDDYKVFRLV 167 (383)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~---d~~~~~ykVv~~~ 167 (383)
.++.+||.|+.|...-.... ....+.+.. |...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~p~~~g~l------s~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 12 VVMTRDDSSGGWLQLGGGGL------SSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEECSSSSCEEEGGGCCC------EEEEEECC---------CCEEEEEE
T ss_pred EEeeEcCCCCCEeeCCCCCc------ccEEEEEecCcCCCCCCEEEEEEEE
Confidence 58899999998854443211 112222222 4456789998765
No 225
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=25.46 E-value=4.4e+02 Score=25.02 Aligned_cols=199 Identities=13% Similarity=0.011 Sum_probs=101.7
Q ss_pred CeeEEEec-CCCcEEEEcCCcccee-ecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCC
Q 016752 109 NGLIALKN-DENGIAFWNPSTKEHL-ILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRS 186 (383)
Q Consensus 109 ~GLll~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~ 186 (383)
++++.+.. ....+.|+|+.|++.. .+|.... ..++.++|. ++|-.+. . ....+.+|+...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~---------p~~v~~SpD-Gr~lyv~-~-------~dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA---------VHISRLSAS-GRYLFVI-G-------RDGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC---------EEEEEECTT-SCEEEEE-E-------TTSEEEEEETTS
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC---------ccceEECCC-CCEEEEE-c-------CCCeEEEEECCC
Confidence 34554444 5568999999998766 4543211 124566653 3443332 2 134688888852
Q ss_pred CceEEeccCCCeeeecCCcceee------CceEEEEEecCCCCCCccEEEEEECCCcee-eEecCCCcC-CcCCee----
Q 016752 187 NSWRRIRVDFPYYILHGWDGTFA------DGHVHWLVTNNPKDDIENLIVAFNLESEEF-QEVPLPHLE-DKKNVL---- 254 (383)
Q Consensus 187 ~~Wr~~~~~~p~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~-~~~~~~---- 254 (383)
.+-+.+. .++.... ..++.+ +|..-+.+.... ..+.++|..+.+- ..++..... +...+.
T Consensus 228 ~t~~~v~-~i~~G~~--P~~ia~s~~~~pDGk~l~v~n~~~-----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~r 299 (567)
T 1qks_A 228 KEPTTVA-EIKIGSE--ARSIETSKMEGWEDKYAIAGAYWP-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR 299 (567)
T ss_dssp SSCCEEE-EEECCSE--EEEEEECCSTTCTTTEEEEEEEET-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCC
T ss_pred CCCcEeE-EEecCCC--CceeEEccccCCCCCEEEEEEccC-----CeEEEEECCCCcEEEEEeccccccccccccCCCc
Confidence 1112222 1111100 022222 575444443322 2488999876543 445543211 100000
Q ss_pred eeEEEEE-CCeEEEEEecCCCCcEEEEEeC---CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcE
Q 016752 255 VMFVGNF-SGCLYFSCLCNYPQPVDIWVLK---GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWE 330 (383)
Q Consensus 255 ~~~L~~~-~G~L~~~~~~~~~~~l~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~ 330 (383)
-..+... ++..+++...+. . .||+.+ ....++..|+. +...+..++.++|..+++.. ....+
T Consensus 300 va~i~~s~~~~~~vv~~~~~-g--~v~~vd~~~~~~~~v~~i~~--~~~~~d~~~~pdgr~~~va~---------~~sn~ 365 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKET-G--KILLVDYTDLNNLKTTEISA--ERFLHDGGLDGSHRYFITAA---------NARNK 365 (567)
T ss_dssp EEEEEECSSSSEEEEEETTT-T--EEEEEETTCSSEEEEEEEEC--CSSEEEEEECTTSCEEEEEE---------GGGTE
T ss_pred eEEEEEcCCCCEEEEEecCC-C--eEEEEecCCCccceeeeeec--cccccCceECCCCCEEEEEe---------CCCCe
Confidence 0122222 234444444222 2 455555 44555555553 34566778888988888874 35678
Q ss_pred EEEEeCCCCeEEEEEEE
Q 016752 331 LYWYDPQSQKAADQVTI 347 (383)
Q Consensus 331 ~~~ydl~~~~~~~~v~~ 347 (383)
+.++|.+++++...+.+
T Consensus 366 V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 366 LVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEec
Confidence 99999999998744444
No 226
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=25.28 E-value=3.7e+02 Score=24.05 Aligned_cols=93 Identities=15% Similarity=0.007 Sum_probs=51.4
Q ss_pred EEEEECCCceeeEecCCCcCCcCCeeeeEEEEECCeEEEEEecCCCCcEEEEEeC-CceeeeEEEcC-------------
Q 016752 229 IVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLK-GCWTKAFSFHR------------- 294 (383)
Q Consensus 229 il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~l~iW~l~-~~W~~~~~i~~------------- 294 (383)
|..+|+.+......-+..+. .....+.+. +|.+.+...... .+.||-++ +.-.....+..
T Consensus 222 i~vwd~~~~~~~~~~~~~h~--~~v~~~~~s--d~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFGHK--HFVSSICCG--KDYLLLSAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp EEEEEESCTTCEEEECCCCS--SCEEEEEEC--STTEEEEEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred EEEEECCCCceeeeeecCCC--CceEEEEEC--CCCEEEEEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 88888876653322111111 111022222 777776666544 89999988 54443333221
Q ss_pred ---------CCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeC
Q 016752 295 ---------SVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDP 336 (383)
Q Consensus 295 ---------~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl 336 (383)
.......-+.+.++|..|+... ..++.+..||+
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~---------~~d~~i~iw~~ 337 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFV---------EATKCIIILEM 337 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEE---------TTCSEEEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEE---------CCCCeEEEEEe
Confidence 0002244556667788777772 25778999999
No 227
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=25.15 E-value=3.7e+02 Score=24.72 Aligned_cols=61 Identities=10% Similarity=0.121 Sum_probs=44.8
Q ss_pred eeCceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEECCeEEEEEec
Q 016752 208 FADGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNFSGCLYFSCLC 271 (383)
Q Consensus 208 ~~~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~ 271 (383)
|.+|+||..............+..-+...+.|+.+.+|...... .+-++..++-|+|....
T Consensus 346 yYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHht---nlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHT---TLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSS---CCCEEEETTEEEEEEEC
T ss_pred hhCCEEEEEecCcCCCCCcceeeeecccCCchhheecccccccc---CCCcceeCCEEEEEecc
Confidence 56999999997654323344588888999999999999654222 34467788899998764
No 228
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=25.06 E-value=3.3e+02 Score=23.46 Aligned_cols=182 Identities=12% Similarity=0.081 Sum_probs=89.2
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceE
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWR 190 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr 190 (383)
.|+....+..+.|||..+++...--... ......+.+.+..+.-.++... ....+.+|+.+++...
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~g~~l~sgs-------~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHGH-------GADVLCLDLAPSETGNTFVSGG-------CDKKAMVWDMRSGQCV 233 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECCCSSCCEEEEEE-------TTSCEEEEETTTCCEE
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcCC-------CCCeEEEEEEeCCCCCEEEEEe-------CCCeEEEEECCCCcEE
Confidence 4444445678999999888754321111 1122234444433222333322 2346788888876532
Q ss_pred EeccCCCeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeE-ecCCCcCCcCCeeeeEEEE-ECCeEE
Q 016752 191 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQE-VPLPHLEDKKNVLVMFVGN-FSGCLY 266 (383)
Q Consensus 191 ~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~-~~G~L~ 266 (383)
..-...... -.++.+ +|.....+..+. .|-.+|+.+..-.. +...... ... ..+.. .+|.+.
T Consensus 234 ~~~~~h~~~----v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~--~~~--~~~~~s~~g~~l 299 (354)
T 2pbi_B 234 QAFETHESD----VNSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESII--FGA--SSVDFSLSGRLL 299 (354)
T ss_dssp EEECCCSSC----EEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCC--SCE--EEEEECTTSSEE
T ss_pred EEecCCCCC----eEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcc--cce--eEEEEeCCCCEE
Confidence 211000000 022222 454444443332 38889988764332 2221111 111 12222 257777
Q ss_pred EEEecCCCCcEEEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEe
Q 016752 267 FSCLCNYPQPVDIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYD 335 (383)
Q Consensus 267 ~~~~~~~~~~l~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~yd 335 (383)
++..... .+.||-+. +. ....+.. -.....-++++++|..|.-. ..++.+..||
T Consensus 300 ~~g~~d~--~i~vwd~~~~~--~~~~l~~-h~~~v~~l~~spdg~~l~sg----------s~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDY--TINVWDVLKGS--RVSILFG-HENRVSTLRVSPDGTAFCSG----------SWDHTLRVWA 354 (354)
T ss_dssp EEEETTS--CEEEEETTTCS--EEEEECC-CSSCEEEEEECTTSSCEEEE----------ETTSEEEEEC
T ss_pred EEEECCC--cEEEEECCCCc--eEEEEEC-CCCcEEEEEECCCCCEEEEE----------cCCCCEEecC
Confidence 6666555 89999886 32 2223321 11345567777888766655 3566777664
No 229
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.16 E-value=1.5e+02 Score=26.23 Aligned_cols=111 Identities=6% Similarity=-0.032 Sum_probs=55.0
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCC-CCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCC
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWG-DLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSN 187 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~ 187 (383)
+|+|++...+..++-.|..|++.+.--.... .. .. .........+-.++.+.. .....+..|+..++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p----~~---~~~~~~~~~~~~~~vv~p-----~~dG~l~a~~~~~G 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQP----LI---EIQEPSRLETYETLIIEP-----FGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCC----SE---ECCCSCTTTSSEEEEECC-----STTTEEEEEETTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCC----cE---EecCCccccCCcEEEEEE-----CCCCEEEEEECCCC
Confidence 5677777766678888888877653221110 00 00 000000001112222210 02345666777777
Q ss_pred ceEEeccCCCeee-----ecCCccee-------eCceEEEEEecCCCCCCccEEEEEECCCcee
Q 016752 188 SWRRIRVDFPYYI-----LHGWDGTF-------ADGHVHWLVTNNPKDDIENLIVAFNLESEEF 239 (383)
Q Consensus 188 ~Wr~~~~~~p~~~-----~~~~~~v~-------~~G~lywl~~~~~~~~~~~~il~fD~~~e~~ 239 (383)
.|+... .+|... .....+|. .+|.+|.-..++. +.++|..+++-
T Consensus 78 ~~~~~~-~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-------l~ald~~tG~~ 133 (339)
T 2be1_A 78 LQKLPL-SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-------MYTINMLNGEI 133 (339)
T ss_dssp EEEEEE-EHHHHHTTCSEEEECC----------CCEEEEECEEEEE-------EEEEETTTCCE
T ss_pred cEEeee-ccccceeccccccCCCceeecccccccCCEEEEEecCCE-------EEEEECCCCcE
Confidence 665322 222110 11224555 7999999877664 99999987753
No 230
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=23.92 E-value=3.1e+02 Score=22.72 Aligned_cols=31 Identities=3% Similarity=0.021 Sum_probs=21.7
Q ss_pred eEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCe
Q 016752 300 VKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQK 340 (383)
Q Consensus 300 ~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~ 340 (383)
..-+.++++|..|+.. ..++.+..||+++++
T Consensus 309 v~~~~~s~~~~~l~s~----------~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSA----------GDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEECSSSCCEEEE----------ETTSCEEEEEECTTS
T ss_pred EEEEEEcCCCCEEEEe----------cCCCcEEEEecCcCc
Confidence 4456666777765555 367789999998864
No 231
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=23.61 E-value=3.7e+02 Score=23.51 Aligned_cols=195 Identities=14% Similarity=0.168 Sum_probs=96.6
Q ss_pred CcCe-eEEEecCCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcC
Q 016752 107 SCNG-LIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLR 185 (383)
Q Consensus 107 s~~G-Lll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 185 (383)
+.+| +|+....+..+.|||..+++....-... ......+.+.+..+ + ++... ....+.+|+.+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~p~~~-~-l~s~s-------~d~~v~iwd~~ 195 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-------EQDIYSLDYFPSGD-K-LVSGS-------GDRTVRIWDLR 195 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTSS-E-EEEEE-------TTSEEEEEETT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-------CCCEEEEEEcCCCC-E-EEEec-------CCCcEEEEECC
Confidence 3455 4444445678999999988765432211 12334566666432 2 33222 24567888888
Q ss_pred CCceEEeccCCCeeeecCCcceee---CceEEEEEecCCCCCCccEEEEEECCCceee-EecCCCcC--CcCCeeeeEEE
Q 016752 186 SNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQ-EVPLPHLE--DKKNVLVMFVG 259 (383)
Q Consensus 186 ~~~Wr~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~--~~~~~~~~~L~ 259 (383)
++.-...- ..... -..+.+ +|.+...+..+. .|..+|+.+.... .+..+... ..... -..+.
T Consensus 196 ~~~~~~~~-~~~~~----v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~v~ 263 (393)
T 1erj_A 196 TGQCSLTL-SIEDG----VTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDS-VYSVV 263 (393)
T ss_dssp TTEEEEEE-ECSSC----EEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSC-EEEEE
T ss_pred CCeeEEEE-EcCCC----cEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCC-EEEEE
Confidence 76543221 11100 011211 455444443332 3888998876543 23322211 11111 11233
Q ss_pred EE-CCeEEEEEecCCCCcEEEEEeC-Ccee----------eeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCC
Q 016752 260 NF-SGCLYFSCLCNYPQPVDIWVLK-GCWT----------KAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDIN 327 (383)
Q Consensus 260 ~~-~G~L~~~~~~~~~~~l~iW~l~-~~W~----------~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~ 327 (383)
.. +|.+.+...... .+.||-++ ..-. ...++.. -.....-+++.+++..|+-. ..
T Consensus 264 ~~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg----------s~ 330 (393)
T 1erj_A 264 FTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSG----------SK 330 (393)
T ss_dssp ECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEEC-CSSCEEEEEECGGGCEEEEE----------ET
T ss_pred ECCCCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEE----------eC
Confidence 33 566665555444 89999987 2110 0111110 01234456666777766555 36
Q ss_pred CcEEEEEeCCCCeEE
Q 016752 328 RWELYWYDPQSQKAA 342 (383)
Q Consensus 328 ~~~~~~ydl~~~~~~ 342 (383)
++.+..||+++++..
T Consensus 331 D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 331 DRGVLFWDKKSGNPL 345 (393)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCeEE
Confidence 778999999988765
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=23.59 E-value=1.9e+02 Score=25.77 Aligned_cols=67 Identities=10% Similarity=0.113 Sum_probs=44.4
Q ss_pred EEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCcccc-CCCcEEEEEeCCCCeEEEEEEEe
Q 016752 278 DIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDD-INRWELYWYDPQSQKAADQVTIH 348 (383)
Q Consensus 278 ~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~-~~~~~~~~ydl~~~~~~~~v~~~ 348 (383)
.|++++ ..+..+.+|+... .. -+.++++|+.+|+..... ++... ..+..+..+|+.|.+....+.+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--~P-~i~~spDg~~lyVan~~~-~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--LS-LAVAGHSGSDFALASTSF-ARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--TC-EEEECTTSSCEEEEEEEE-TTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred eEEEEECCCCeEEEEEeCCC--CC-ceEECCCCCEEEEEcccc-cccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 788888 7788888888532 22 477788999999983100 00000 02457999999999988676654
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=23.50 E-value=4.1e+02 Score=24.65 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=56.5
Q ss_pred cEEEEEECCCce-eeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEec----CCCCcEEEEEeC-CceeeeEEEcCC----
Q 016752 227 NLIVAFNLESEE-FQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLC----NYPQPVDIWVLK-GCWTKAFSFHRS---- 295 (383)
Q Consensus 227 ~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~----~~~~~l~iW~l~-~~W~~~~~i~~~---- 295 (383)
..|..+|+.+.+ -..|+++... .... .+.++.. +|+..++... ....++.+|..+ +.|.....|+..
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g-~~P~-~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEEN-RMAL-ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTE-EEEE-EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred CEEEEEECCCCcEeeEEecCCCC-Cccc-eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 469999998764 3456664210 0011 1111112 4555444432 122256666666 889888777531
Q ss_pred ---C----------CceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCC
Q 016752 296 ---V----------GDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQ 337 (383)
Q Consensus 296 ---~----------~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~ 337 (383)
+ +....-+.++.||+.+|+.. .....+..||..
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn---------rg~d~VavfdV~ 351 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL---------WGIGEVRQYDIS 351 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE---------TTTTEEEEEECS
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEe---------CCCCEEEEEEec
Confidence 1 11233456778999999984 456789999975
No 234
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=22.54 E-value=5.9e+02 Score=25.45 Aligned_cols=115 Identities=8% Similarity=0.011 Sum_probs=63.2
Q ss_pred cceee---CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEE--ECCeEEEEEecCCCCcEEE
Q 016752 205 DGTFA---DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGN--FSGCLYFSCLCNYPQPVDI 279 (383)
Q Consensus 205 ~~v~~---~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~l~i 279 (383)
.++.+ +|.|||...... .|.++|+.......+-. .... .. ..|++ .+|.|++....... .|..
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~------~I~v~~ldG~~~~~l~~-~~l~-~P---~gIaVDp~~g~LYwtD~g~~~-~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLFR-ENGS-KP---RAIVVDPVHGFMYWTDWGTPA-KIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEETTTT------EEEEEETTSSSEEEEEE-CTTC-CE---EEEEEETTTTEEEEEECSSSC-EEEE
T ss_pred ceeeeeecCCcEEEEecCCC------eEEEEeCCCCeEEEEEe-CCCC-Cc---ceEEEecCCCCEEEecCCCCC-eEEE
Confidence 45554 469999875543 59999998765544421 1111 11 23455 35888877643221 3333
Q ss_pred EEeCCceeeeEEEcCCCCceeEEEEEE--eCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 280 WVLKGCWTKAFSFHRSVGDYVKALAYS--KSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 280 W~l~~~W~~~~~i~~~~~~~~~~~~~~--~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
-.|+++-.+. +.. .....|.|+. ..++.||+.+ .....|..+|+.....+ .+
T Consensus 542 ~~~dG~~~~~--lv~--~~l~~P~GLavD~~~~~LYwaD---------~~~~~I~~~d~dG~~~~-~v 595 (791)
T 3m0c_C 542 GGLNGVDIYS--LVT--ENIQWPNGITLDLLSGRLYWVD---------SKLHSISSIDVNGGNRK-TI 595 (791)
T ss_dssp EETTSCCEEE--EEC--SSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCE-EE
T ss_pred EecCCCceEE--EEe--CCCCCceEEEEecCCCeEEEEe---------CCCCcEEEEecCCCceE-EE
Confidence 3334432222 211 1223455554 3467888884 35568888888877766 44
No 235
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=22.50 E-value=2.7e+02 Score=25.08 Aligned_cols=65 Identities=5% Similarity=-0.060 Sum_probs=41.4
Q ss_pred EEEEeC-CceeeeEEEcCCCCceeEEEEEEeCCCEEEEEecc--CCCccccCCCcEEEEEeCCCCeEEEEEEE
Q 016752 278 DIWVLK-GCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFK--YGEEDDDINRWELYWYDPQSQKAADQVTI 347 (383)
Q Consensus 278 ~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~--~~~~~~~~~~~~~~~ydl~~~~~~~~v~~ 347 (383)
.|++++ .....+.+|+... ... +.++++|+.+|+...- .+.+ ......+..+|..|.+....+.+
T Consensus 60 ~V~ViD~~t~~v~~~I~vG~--~P~-va~spDG~~lyVan~~~~r~~~--G~~~~~VsviD~~t~~v~~~I~v 127 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMIDGGF--LPN-PVVADDGSFIAHASTVFSRIAR--GERTDYVEVFDPVTLLPTADIEL 127 (386)
T ss_dssp EEEEEETTTTEEEEEEEECS--SCE-EEECTTSSCEEEEEEEEEETTE--EEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEEEEECCCCeEEEEEECCC--CCc-EEECCCCCEEEEEccccccccc--CCCCCEEEEEECCCCeEEEEEEC
Confidence 677777 5666677777522 235 8889999999987200 0000 00134699999999998756655
No 236
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=22.45 E-value=3.3e+02 Score=22.52 Aligned_cols=192 Identities=9% Similarity=0.018 Sum_probs=90.7
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEe-ccC
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRI-RVD 195 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~-~~~ 195 (383)
....++++||.+++...+..+.... ......++.+|+..+ ++.... ....+.+|+.. +..+.. . .
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~---~~~~~~~i~~~~~~g--~l~v~~-------~~~~l~~~d~~-g~~~~~~~-~ 109 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG---YGGIPAGCQCDRDAN--QLFVAD-------MRLGLLVVQTD-GTFEEIAK-K 109 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT---EECCEEEEEECSSSS--EEEEEE-------TTTEEEEEETT-SCEEECCS-B
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC---CCCCCceEEEecCCC--cEEEEE-------CCCCEEEEeCC-CCEEEEEe-c
Confidence 3457899999999887654311000 012334566675423 222222 12257788887 766554 2 1
Q ss_pred CCeeee-cCCcceee--CceEEEEEecCC---------CCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE--
Q 016752 196 FPYYIL-HGWDGTFA--DGHVHWLVTNNP---------KDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-- 261 (383)
Q Consensus 196 ~p~~~~-~~~~~v~~--~G~lywl~~~~~---------~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-- 261 (383)
...... .....+.+ +|.+|+...... .......|..+|.. +++..+.- ... .. ..++..
T Consensus 110 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~-~~---~~i~~~~~ 182 (314)
T 1pjx_A 110 DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ-FP---NGIAVRHM 182 (314)
T ss_dssp CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES-SE---EEEEEEEC
T ss_pred cCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC-Cc---ceEEEecc
Confidence 111000 11123333 677776553320 00112358899987 55544311 000 01 122332
Q ss_pred ---CC-eEEEEEecCCCCcEEEEEeC--CceeeeEEEcC-CCC--ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEE
Q 016752 262 ---SG-CLYFSCLCNYPQPVDIWVLK--GCWTKAFSFHR-SVG--DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELY 332 (383)
Q Consensus 262 ---~G-~L~~~~~~~~~~~l~iW~l~--~~W~~~~~i~~-~~~--~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~ 332 (383)
+| .|++...... .+.+|.++ +.......+.. .-. ....-+++.++|. +++.. .....+.
T Consensus 183 ~d~dg~~l~v~~~~~~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~---------~~~~~i~ 250 (314)
T 1pjx_A 183 NDGRPYQLIVAETPTK--KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVAN---------WGSSHIE 250 (314)
T ss_dssp TTSCEEEEEEEETTTT--EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEE---------ETTTEEE
T ss_pred cCCCCCEEEEEECCCC--eEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEE---------cCCCEEE
Confidence 45 3555543333 67777665 44433222211 100 1233344555654 66663 2466899
Q ss_pred EEeCCCCeE
Q 016752 333 WYDPQSQKA 341 (383)
Q Consensus 333 ~ydl~~~~~ 341 (383)
.||+++++.
T Consensus 251 ~~d~~~g~~ 259 (314)
T 1pjx_A 251 VFGPDGGQP 259 (314)
T ss_dssp EECTTCBSC
T ss_pred EEcCCCCcE
Confidence 999995543
No 237
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=22.30 E-value=2.5e+02 Score=26.78 Aligned_cols=121 Identities=12% Similarity=0.110 Sum_probs=58.7
Q ss_pred CeeEEEecC-CCcEEEEcC-CccceeecCCCCCCCcCcc----ceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEE
Q 016752 109 NGLIALKND-ENGIAFWNP-STKEHLILPKFWGDLKDKV----HRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVY 182 (383)
Q Consensus 109 ~GLll~~~~-~~~~~V~NP-~T~~~~~LP~~~~~~~~~~----~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vy 182 (383)
+|.|.+... ...++-.|+ .|++.+.--.......... .....+..++ ++ +|+... ....+..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~v~v~~-------~dg~l~al 130 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG---AG-QIVKKQ-------ANGHLLAL 130 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TT-EEEEEC-------TTSEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE---CC-EEEEEe-------CCCEEEEE
Confidence 677766655 556888899 8877652211111000000 0000012222 11 333322 13456667
Q ss_pred EcCCC--ceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCc--eeeE
Q 016752 183 SLRSN--SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESE--EFQE 241 (383)
Q Consensus 183 ss~~~--~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e--~~~~ 241 (383)
+..++ .|+......+........++..+|.+|.-....+ ......|.+||..+. .|+.
T Consensus 131 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAE-LGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGG-GTCCCEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCc-cCCCCEEEEEECCCCcEEEEE
Confidence 77776 6875431211111222366778999987654210 001235999999765 4654
No 238
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=22.29 E-value=1.5e+02 Score=20.90 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=27.1
Q ss_pred EEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEecc
Q 016752 305 YSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGV 350 (383)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~ 350 (383)
++++|..+++-.+. .....++.||..|-++.|+-.|.|.
T Consensus 75 lsqdgrrvlmhefs-------gssaelvsydsatckvvhredisgq 113 (153)
T 4eqa_C 75 LSQDGRRVLMHEFS-------GSSAELVSYDSATCKVVHREDISGQ 113 (153)
T ss_dssp EETTSSEEEEEEEE-------TTEEEEEEEETTTCCEEEEEECTTC
T ss_pred EecCCceeeeeecc-------CCchheeeecCceeEEEeeccccCc
Confidence 34677788776432 3455799999999888876666553
No 239
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=22.21 E-value=4.8e+02 Score=24.32 Aligned_cols=43 Identities=21% Similarity=0.211 Sum_probs=31.2
Q ss_pred ceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEEEEecc
Q 016752 298 DYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQVTIHGV 350 (383)
Q Consensus 298 ~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v~~~~~ 350 (383)
++...+-+++.=+.||+. ++.+-++.||++|.+.-..-.|.+.
T Consensus 259 DFPvamqvs~kygviyvi----------TK~G~i~lyDleTgt~i~~nrIs~~ 301 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLI----------TKYGYIHLYDLETGTCIYMNRISGE 301 (494)
T ss_dssp CCEEEEEEETTTTEEEEE----------ETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CceeEEEecccCCEEEEE----------ecCceEEEEecccceeeeeecccCC
Confidence 445555556655799998 4888999999999998844345443
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=21.21 E-value=5.7e+02 Score=24.75 Aligned_cols=65 Identities=8% Similarity=0.086 Sum_probs=37.3
Q ss_pred cEEEEEEcCCC--ceEEeccCCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEe
Q 016752 177 TEVSVYSLRSN--SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEV 242 (383)
Q Consensus 177 ~~~~vyss~~~--~Wr~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i 242 (383)
..+..++..++ .|+......+........++..+|.+|.-....+ ......|.+||..+.+ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEec
Confidence 45667777776 6886542211112223367788999987543211 1123469999997654 6553
No 241
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=21.10 E-value=4.2e+02 Score=23.20 Aligned_cols=68 Identities=12% Similarity=0.023 Sum_probs=40.1
Q ss_pred CCeEEEEEecCCCCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 262 SGCLYFSCLCNYPQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 262 ~G~L~~~~~~~~~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+|++.+...... ++.||-++..=........ .....-+++++++..+++.. ..++.+..||+++++.
T Consensus 155 d~~~las~s~D~--tv~~Wd~~~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~~~---------~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 155 AEQVIASVGDDC--TLIIWRLTDEGPILAGYPL--SSPGISVQFRPSNPNQLIVG---------ERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEEEETTS--EEEEEEEETTEEEEEEEEC--SSCEEEEEEETTEEEEEEEE---------ETTSEEEEEETTCCC-
T ss_pred CCCEEEEEECCC--eEEEEECCCCceeeeecCC--CCCcEEEEECCCCCceEEec---------CCCCEEEEEECCCCcc
Confidence 677777766555 8999998721111122222 12344567777655444442 3677899999998765
Q ss_pred E
Q 016752 342 A 342 (383)
Q Consensus 342 ~ 342 (383)
.
T Consensus 222 ~ 222 (393)
T 4gq1_A 222 A 222 (393)
T ss_dssp -
T ss_pred c
Confidence 4
No 242
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=20.87 E-value=4.2e+02 Score=23.90 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=38.7
Q ss_pred CeEEEEEecCCCCcEEEEEeCCceeeeE-EEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeE
Q 016752 263 GCLYFSCLCNYPQPVDIWVLKGCWTKAF-SFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKA 341 (383)
Q Consensus 263 G~L~~~~~~~~~~~l~iW~l~~~W~~~~-~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~ 341 (383)
+.+.+...... ++.||-++.. .... ..+. .....-++++++|+.|+.. ..++.+..||++.+..
T Consensus 162 ~~~las~s~Dg--~v~iwD~~~~-~~~~~~~~~--~~~v~~v~wspdg~~lasg----------s~dg~v~iwd~~~~~~ 226 (434)
T 2oit_A 162 PSMVAVCLADG--SIAVLQVTET-VKVCATLPS--TVAVTSVCWSPKGKQLAVG----------KQNGTVVQYLPTLQEK 226 (434)
T ss_dssp TTEEEEEETTS--CEEEEEESSS-EEEEEEECG--GGCEEEEEECTTSSCEEEE----------ETTSCEEEECTTCCEE
T ss_pred CCEEEEEECCC--eEEEEEcCCC-cceeeccCC--CCceeEEEEcCCCCEEEEE----------cCCCcEEEEccCCccc
Confidence 44554454444 7999988822 2221 1221 1335566777888877777 3677899999984433
Q ss_pred E
Q 016752 342 A 342 (383)
Q Consensus 342 ~ 342 (383)
.
T Consensus 227 ~ 227 (434)
T 2oit_A 227 K 227 (434)
T ss_dssp E
T ss_pred c
Confidence 3
No 243
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.80 E-value=75 Score=21.09 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=19.3
Q ss_pred eEEEecCCCcEEEEcCCccceeecCCC
Q 016752 111 LIALKNDENGIAFWNPSTKEHLILPKF 137 (383)
Q Consensus 111 Lll~~~~~~~~~V~NP~T~~~~~LP~~ 137 (383)
+........+.|.+||.|++.+.--|.
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~S~WekP~ 48 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRLSMWDRPD 48 (73)
T ss_dssp CEEEEESSSCEEEEETTTTEECSSCCT
T ss_pred cEEEECCCCCEEEecCcccceeccCCh
Confidence 444455667899999999998755443
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=20.39 E-value=6e+02 Score=24.71 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=60.6
Q ss_pred CeeEEEecCCCcEEEEcCCccceeecCCCCCCCcCcc----ceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEc
Q 016752 109 NGLIALKNDENGIAFWNPSTKEHLILPKFWGDLKDKV----HRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSL 184 (383)
Q Consensus 109 ~GLll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~----~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 184 (383)
+|.|.+......++-+|+.|++.+.--.......... .....+..++. . +|+... ....+..++.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-~v~v~~-------~dg~l~AlDa 138 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK---G-KVYVGV-------LDGRLEAIDA 138 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET---T-EEEEEC-------TTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC---C-EEEEEc-------cCCEEEEEEC
Confidence 6777666555568888998887653211111100000 00001122221 1 333322 1345667777
Q ss_pred CCC--ceEEecc-CCCeeeecCCcceeeCceEEEEEecCCCCCCccEEEEEECCCce--eeEe
Q 016752 185 RSN--SWRRIRV-DFPYYILHGWDGTFADGHVHWLVTNNPKDDIENLIVAFNLESEE--FQEV 242 (383)
Q Consensus 185 ~~~--~Wr~~~~-~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~il~fD~~~e~--~~~i 242 (383)
.++ .|+.... +..........++..+|.+|.-....+ ......|.+||..+.+ |+.-
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEec
Confidence 776 5886541 111111223367788999987543211 1123469999998754 6654
No 245
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=20.27 E-value=5.1e+02 Score=23.82 Aligned_cols=179 Identities=12% Similarity=0.156 Sum_probs=88.6
Q ss_pred CCCcEEEEcCCccceeecCCCCCCCcCccceeEEEEeeecCCCCEEEEEEEEEeecCCcccEEEEEEcCCCceEEeccCC
Q 016752 117 DENGIAFWNPSTKEHLILPKFWGDLKDKVHRVVDGFGYDAVNDDYKVFRLVQFVRENVEYTEVSVYSLRSNSWRRIRVDF 196 (383)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~~~ 196 (383)
.+..+.+||..+++...++.... ....+.+.|.. .+ ++... ....+.+|+.....-.... ..
T Consensus 323 ~d~~i~~w~~~~~~~~~~~~~~~--------~v~~~~~s~~g-~~--l~~~~------~dg~v~~~~~~~~~~~~~~-~~ 384 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQTLTGHSS--------SVWGVAFSPDG-QT--IASAS------DDKTVKLWNRNGQLLQTLT-GH 384 (577)
T ss_dssp TTSCEEEEETTSCEEEEECCCSS--------CEEEEEECTTS-SE--EEEEE------TTSEEEEEETTCCEEEEEE-CC
T ss_pred CCCeEEEEeCCCCeeEEEeCCCC--------CEEEEEECCCC-CE--EEEEe------CCCEEEEEcCCCCEEEEec-CC
Confidence 44568888877776665543321 22345555532 22 22221 2345677775443332222 11
Q ss_pred CeeeecCCcceee--CceEEEEEecCCCCCCccEEEEEECCCceeeEecCCCcCCcCCeeeeEEEEE-CCeEEEEEecCC
Q 016752 197 PYYILHGWDGTFA--DGHVHWLVTNNPKDDIENLIVAFNLESEEFQEVPLPHLEDKKNVLVMFVGNF-SGCLYFSCLCNY 273 (383)
Q Consensus 197 p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~ 273 (383)
.... .++.+ +|..-..+..+ ..|..+|...+....+..+.. . -..+... +|++.+......
T Consensus 385 ~~~v----~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~----~--v~~~~~s~d~~~l~~~~~d~ 448 (577)
T 2ymu_A 385 SSSV----RGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGHSS----S--VWGVAFSPDDQTIASASDDK 448 (577)
T ss_dssp SSCE----EEEEECTTSSCEEEEETT------SEEEEECTTCCEEEEEECCSS----C--EEEEEECTTSSEEEEEETTS
T ss_pred CCCe----EEEEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCC----C--eEEEEECCCCCEEEEEcCCC
Confidence 0000 11222 44433333222 237777876655554443221 1 1123333 566555555444
Q ss_pred CCcEEEEEeCCceeeeEEEcCCCCceeEEEEEEeCCCEEEEEeccCCCccccCCCcEEEEEeCCCCeEEEEE
Q 016752 274 PQPVDIWVLKGCWTKAFSFHRSVGDYVKALAYSKSEDKVLVDKFKYGEEDDDINRWELYWYDPQSQKAADQV 345 (383)
Q Consensus 274 ~~~l~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~v~l~~~~~~~~~~~~~~~~~~~ydl~~~~~~~~v 345 (383)
.+.+|.+++. ....+.. -.....-++++++|..|... ..++.+..||...+.++ .+
T Consensus 449 --~v~~w~~~~~--~~~~~~~-~~~~v~~~~~spd~~~las~----------~~d~~i~iw~~~~~~~~-~~ 504 (577)
T 2ymu_A 449 --TVKLWNRNGQ--LLQTLTG-HSSSVRGVAFSPDGQTIASA----------SDDKTVKLWNRNGQLLQ-TL 504 (577)
T ss_dssp --EEEEEETTSC--EEEEEEC-CSSCEEEEEECTTSCEEEEE----------ETTSEEEEEETTSCEEE-EE
T ss_pred --EEEEEECCCC--EEEEEcC-CCCCEEEEEEcCCCCEEEEE----------eCCCEEEEEcCCCCEEE-EE
Confidence 7999987632 1222222 11335567778888766666 36778999998776666 44
Done!