BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016754
(383 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKK-EFYS 314
K F+ EL+ + NFS N +LG G Y G L DG+ VAVKRLK Q + +F +
Sbjct: 26 KRFSLRELQVASDNFSNKN-ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
E+ + H NL+ ++G C +R +VY ++ NG + L P LDW R ++
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 375 ATTLAQGIA 383
A A+G+A
Sbjct: 145 ALGSARGLA 153
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKK-EFYS 314
K F+ EL+ + NF N +LG G Y G L DG VAVKRLK Q + +F +
Sbjct: 18 KRFSLRELQVASDNFXNKN-ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
E+ + H NL+ ++G C +R +VY ++ NG + L P LDW R ++
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 375 ATTLAQGIA 383
A A+G+A
Sbjct: 137 ALGSARGLA 145
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS 305
++S LVP +L T NF + L+G G Y G+L DG++VA+KR S
Sbjct: 17 SSSYLVPFESYRVPLVDLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 306 FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS 365
Q +EF +EI + HP+LV++ G C + + ++Y+++ NG L R L+ S
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 366 LDWAMRMKVATTLAQGI 382
+ W R+++ A+G+
Sbjct: 136 MSWEQRLEICIGAARGL 152
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSS 305
++S LVP +L T NF + L+G G Y G+L DG++VA+KR S
Sbjct: 17 SSSYLVPFESYRVPLVDLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75
Query: 306 FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS 365
Q +EF +EI + HP+LV++ G C + + ++Y+++ NG L R L+ S
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 366 LDWAMRMKVATTLAQGI 382
+ W R+++ A+G+
Sbjct: 136 MSWEQRLEICIGAARGL 152
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 369 AMRMKVATTLAQGI 382
MR K+A A GI
Sbjct: 133 HMRCKIAQGAANGI 146
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 126
Query: 369 AMRMKVATTLAQGI 382
MR K+A A GI
Sbjct: 127 HMRCKIAQGAANGI 140
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 369 AMRMKVATTLAQGI 382
MR K+A A GI
Sbjct: 133 HMRCKIAQGAANGI 146
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDG----SRVAVKRLKR----SSFQRK 309
F+ EL+++T NF E +G +K G G++ G + VAVK+L ++ + K
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
++F EI A+ H NLV + G D D +VY + NG L L + G L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLSWH 124
Query: 370 MRMKVATTLAQGI 382
R K+A A GI
Sbjct: 125 XRCKIAQGAANGI 137
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 293 GSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
GS VAVK L F +R EF E+ RL HPN+V G + IV E++ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 351 PLDRWLHHIPRGGR-SLDWAMRMKVATTLAQGI 382
L R LH G R LD R+ +A +A+G+
Sbjct: 120 SLYRLLHK--SGAREQLDERRRLSMAYDVAKGM 150
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 293 GSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
GS VAVK L F +R EF E+ RL HPN+V G + IV E++ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 351 PLDRWLHHIPRGGR-SLDWAMRMKVATTLAQGI 382
L R LH G R LD R+ +A +A+G+
Sbjct: 120 SLYRLLHK--SGAREQLDERRRLSMAYDVAKGM 150
>pdb|1JWI|A Chain A, Crystal Structure Of Bitiscetin, A Von Willeband Factor-
Dependent Platelet Aggregation Inducer.
pdb|1UEX|A Chain A, Crystal Structure Of Von Willebrand Factor A1 Domain
Complexed With Snake Venom Bitiscetin
Length = 131
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCG----K 108
C PDW + K C+ +W+++E +C E GHLA++ S EE KL K
Sbjct: 4 CLPDW--SSYKGHCYKVFKKVGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTK 61
Query: 109 NVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLV 168
V W+G R + T S +W+D S E++ + C L H
Sbjct: 62 FVYDAWIGLRDESKTQQCSPQWTDGSSVVYENVDE----PTKCFGLDVHTEY-------- 109
Query: 169 SNGSRSLVTERCNTSHPFIC 188
R+ C +PFIC
Sbjct: 110 ----RTWTDLPCGEKNPFIC 125
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 125
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNR 103
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR 105
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 137
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 124
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 124
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 125
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR 105
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 126
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR 105
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 129
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR 103
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR 103
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR 105
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 128
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR 110
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VAVK +K S + EF+ E +L HP LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
YIV E++ NG L L+++ G+ L+ + +++ + +G+A
Sbjct: 75 EYPIYIVTEYISNGCL---LNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 328
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YI+ EF+ G L +L R
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNR 312
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ EF+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 351 PLDRWLH 357
L +L
Sbjct: 102 SLREYLQ 108
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YI+ EF+ G L +L R + ++ + + +AT ++ +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAM 370
>pdb|2AFP|A Chain A, The Solution Structure Of Type Ii Antifreeze Protein
Reveals A New Member Of The Lectin Family
Length = 129
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W +C Y +W +ET C ++GGHLA++ S EE Q L N
Sbjct: 7 CPAGW--QPLGDRCIYYETTAMTWALAETNCMKLGGHLASIHSQEEHSFIQTL---NAGV 61
Query: 113 CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS 172
W+GG + +W WSD +F S C++ P V A + + +
Sbjct: 62 VWIGGSAC--LQAGAWTWSDGTPM---------NFRSWCSTKPDDVLAACCM-QMTAAAD 109
Query: 173 RSLVTERCNTSHPFICMV 190
+ C SH +C +
Sbjct: 110 QCWDDLPCPASHKSVCAM 127
>pdb|1FVU|B Chain B, Crystal Structure Of Botrocetin
pdb|1FVU|D Chain D, Crystal Structure Of Botrocetin
pdb|1IJK|C Chain C, The Von Willebrand Factor Mutant (I546v) A1 Domain-
Botrocetin Complex
pdb|1U0N|C Chain C, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
pdb|1U0O|B Chain B, The Mouse Von Willebrand Factor A1-Botrocetin Complex
Length = 125
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
CPPDW + + C+ + + WD++E +C E G HL + S EE + L + +
Sbjct: 2 CPPDW--SSYEGHCYRFFKEWMHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEML 59
Query: 111 NG--CWVGGRSINTTVGLSWKWSDNM 134
G W+G + ++W+D M
Sbjct: 60 KGDVVWIGLSDVWNKC--RFEWTDGM 83
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGI 382
+++++ +A GI
Sbjct: 123 VKLRLMLDIALGI 135
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGI 382
+++++ +A GI
Sbjct: 123 VKLRLMLDIALGI 135
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGI 382
+++++ +A GI
Sbjct: 123 VKLRLMLDIALGI 135
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 274 NRLLGDSKTGGTYSGILPDGS-----RVAVKRLKRSSFQRKK-EFYSEIGRFARLHHPNL 327
+++G + G Y G+L S VA+K LK ++++ +F E G + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
+ ++G + I+ E++ NG LD++L
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLRE 139
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 351 PLDRWLH 357
L +L
Sbjct: 130 SLRDYLQ 136
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 351 PLDRWLH 357
L +L
Sbjct: 117 SLRDYLQ 123
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 351 PLDRWLH 357
L +L
Sbjct: 117 SLRDYLQ 123
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLH 357
L +L
Sbjct: 99 SLRDYLQ 105
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 351 PLDRWLH 357
L +L
Sbjct: 102 SLRDYLQ 108
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLH 357
L +L
Sbjct: 99 SLRDYLQ 105
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 351 PLDRWLH 357
L +L
Sbjct: 97 SLRDYLQ 103
>pdb|2ZIB|A Chain A, Crystal Structure Analysis Of Calcium-Independent Type Ii
Antifreeze Protein
Length = 133
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W ++ ++ CF +WD +E C GGHLA++ S EE+ + + V
Sbjct: 10 CPAGWTLHGQR--CFYSEATAMTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVAGIV-- 65
Query: 113 CWVGGRSINTTVGLSWKWSDN 133
W+GG + V +W W+D
Sbjct: 66 -WIGGSACK--VAGAWSWTDG 83
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 351 PLDRWLH 357
L +L
Sbjct: 104 SLRDYLQ 110
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 351 PLDRWLH 357
L +L
Sbjct: 105 SLRDYLQ 111
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 351 PLDRWLH 357
L +L
Sbjct: 102 SLRDYLQ 108
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 351 PLDRWLH 357
L +L
Sbjct: 106 SLRDYLQ 112
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 293 GSRVAVKRLKRSS----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
G VAVK + Q + E FA L HPN++A++G C + +V EF
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
GPL+R L G+ + + + A +A+G+
Sbjct: 90 GGPLNRVL-----SGKRIPPDILVNWAVQIARGM 118
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLH 357
L +L
Sbjct: 99 SLRDYLQ 105
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 351 PLDRWLH 357
L +L
Sbjct: 98 SLRDYLQ 104
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 351 PLDRWLH 357
L +L
Sbjct: 103 SLRDYLQ 109
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 351 PLDRWLH 357
L +L
Sbjct: 100 SLRDYLQ 106
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 296 VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK +R ++EF SE + HPN++ ++G + I+ EF+ NG LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 355 WLH 357
+L
Sbjct: 107 FLR 109
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
YIV E++ G L +L R
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNR 124
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 296 VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK +R ++EF SE + HPN++ ++G + I+ EF+ NG LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 355 WLH 357
+L
Sbjct: 105 FLR 107
>pdb|2XR6|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Trimannoside Mimic
Length = 170
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 21 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 78
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 79 FTWMGLSDLNQEG--TWQWVD 97
>pdb|2B6B|D Chain D, Cryo Em Structure Of Dengue Complexed With Crd Of Dc-Sign
Length = 175
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 26 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 83
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 84 FTWMGLSDLNQEG--TWQWVD 102
>pdb|2XR5|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Dimannoside Mimic
Length = 166
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
+ PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 15 RHPCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 72
Query: 110 VNGCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 73 NRFTWMGLSDLNQEG--TWQWVD 93
>pdb|1K9I|A Chain A, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|B Chain B, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|C Chain C, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|D Chain D, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|E Chain E, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|F Chain F, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|G Chain G, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|H Chain H, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|I Chain I, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|J Chain J, Complex Of Dc-Sign And Glcnac2man3
Length = 156
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 7 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 64
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 65 FTWMGLSDLNQEG--TWQWVD 83
>pdb|1SL4|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Man4
pdb|2IT6|A Chain A, Crystal Structure Of Dcsign-Crd With Man2
Length = 155
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 6 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 63
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 64 FTWMGLSDLNQEG--TWQWVD 82
>pdb|1SL5|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Lnfp Iii (Dextra L504).
pdb|2IT5|A Chain A, Crystal Structure Of Dcsign-crd With Man6
Length = 139
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 6 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 63
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 64 FTWMGLSDLNQEG--TWQWVD 82
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K +K S + +F E +L HP LV + G C +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 337 HGDRYIVYEFVVNGPLDRWL 356
+V+EF+ +G L +L
Sbjct: 94 QAPICLVFEFMEHGCLSDYL 113
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
D VAVK LK +S +K+F+ E L H ++V G C + +V+E++ +G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 352 LDRWL 356
L+++L
Sbjct: 102 LNKFL 106
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 293 GSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--VYEFVVN 349
G +VAVK LK S + EI L+H N+V KG C + G I + EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
G L +L P+ ++ ++K A + +G+
Sbjct: 110 GSLKEYL---PKNKNKINLKQQLKYAVQICKGM 139
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 245 PAASALVPPSWKVFTTEELRSITKNFSEG--------NRLLGDSKTGGTYSGILP-DGSR 295
P + P FT E+ + F++ +++G + G SG L G R
Sbjct: 5 PGMKIFIDP----FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKR 60
Query: 296 ---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
VA+K LK + +++++F SE + HPN++ ++G I+ EF+ NG
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 352 LDRWLHH 358
LD +L
Sbjct: 121 LDSFLRQ 127
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 293 GSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--VYEFVVN 349
G +VAVK LK S + EI L+H N+V KG C + G I + EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
G L +L P+ ++ ++K A + +G+
Sbjct: 98 GSLKEYL---PKNKNKINLKQQLKYAVQICKGM 127
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 296 VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK + +++++F SE + HPN++ ++G I+ EF+ NG LD
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 355 WLHH 358
+L
Sbjct: 98 FLRQ 101
>pdb|1OZ7|A Chain A, Crystal Structure Of Echicetin From The Venom Of Indian
Saw- Scaled Viper (Echis Carinatus) At 2.4 Resolution
Length = 131
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 26/143 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
CPP W N C+ ++WDE+E +C + G GHL ++ S +EE + +N+
Sbjct: 2 CPPGWSSN--GVYCYMLFKEPKTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENI 59
Query: 111 N---GCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTL 167
W G + S +WSD GSF S + C +
Sbjct: 60 GKMYKIWTGLSERSKEQHCSSRWSD------------GSFFRS-----YEIAIRYSECFV 102
Query: 168 VSNGS--RSLVTERCNTSHPFIC 188
+ S R+ V C + PF+C
Sbjct: 103 LEKQSVFRTWVATPCENTFPFMC 125
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
D VAVK LK + +K+F E L H ++V G C D +V+E++ +G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 352 LDRWL 356
L+++L
Sbjct: 104 LNKFL 108
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 293 GSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVN 349
G VAVK LK Q + + EI L+H +++ KGCC D G++ +V E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV-- 100
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
PL ++PR S+ A + A + +G+A
Sbjct: 101 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMA 131
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 337 HGDRYIVYEFVVNGPLDRWLH 357
+V+EF+ +G L +L
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR 94
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 337 HGDRYIVYEFVVNGPLDRWLH 357
+V+EF+ +G L +L
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR 92
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 293 GSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVN 349
G VAVK LK Q + + EI L+H +++ KGCC D G++ +V E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV-- 100
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
PL ++PR S+ A + A + +G+A
Sbjct: 101 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMA 131
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 337 HGDRYIVYEFVVNGPLDRWLH 357
+V+EF+ +G L +L
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR 97
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 337 HGDRYIVYEFVVNGPLDRWLH 357
+V+EF+ +G L +L
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR 94
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|1BJ3|A Chain A, Crystal Structure Of Coagulation Factor Ix-Binding Protein
(Ix-Bp) From Venom Of Habu Snake With A Heterodimer Of
C-Type Lectin Domains
pdb|1J34|A Chain A, Crystal Structure Of Mg(Ii)-And Ca(Ii)-Bound Gla Domain Of
Factor Ix Complexed With Binding Protein
pdb|1J35|A Chain A, Crystal Structure Of Ca(Ii)-Bound Gla Domain Of Factor Ix
Complexed With Binding Protein
pdb|1X2T|A Chain A, Crystal Structure Of Habu Ix-Bp At Ph 6.5
pdb|1X2T|C Chain C, Crystal Structure Of Habu Ix-Bp At Ph 6.5
pdb|1X2W|A Chain A, Crystal Structure Of Apo-Habu Ix-Bp At Ph 4.6
Length = 129
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
CP W E C+ +++WD++E +C E GGHL ++ S E +L +N+
Sbjct: 2 CPSGWSSYE--GHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENI 59
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCT 166
W+G R S +WSD S S + A C
Sbjct: 60 QNTKSYVWIGLRVQGKEKQCSSEWSDGSS----------------VSYENWIEAESKTCL 103
Query: 167 LVSN--GSRSLVTERCNTSHPFIC 188
+ G R V C +PF+C
Sbjct: 104 GLEKETGFRKWVNIYCGQQNPFVC 127
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E++ NG LD +L
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLR 109
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 277 LGDSKTGGTY----SGILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
LG+ G + +LP+ + VAVK LK +S +++F E L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWL 356
G C + +V+E++ +G L+R+L
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|1DV8|A Chain A, Crystal Structure Of The Carbohydrate Recognition Domain
Of The H1 Subunit Of The Asialoglycoprotein Receptor
Length = 128
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP +W+ E + C+ + + ++W +++ YC+ HL +TS+EE+ Q G
Sbjct: 1 CPVNWV--EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG----- 53
Query: 113 CWVGGRSINTTVGL-----SWKWSD 132
+NT +GL WKW D
Sbjct: 54 ------PVNTWMGLHDQNGPWKWVD 72
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E++ NG LD +L
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLR 126
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 289 ILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 346
+LP+ + VAVK LK +S +++F E L H ++V G C + +V+E+
Sbjct: 65 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124
Query: 347 VVNGPLDRWL 356
+ +G L+R+L
Sbjct: 125 MRHGDLNRFL 134
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 12 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 71
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 72 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 353 DRWLH 357
D +L
Sbjct: 132 DSFLR 136
>pdb|1JWI|B Chain B, Crystal Structure Of Bitiscetin, A Von Willeband Factor-
Dependent Platelet Aggregation Inducer.
pdb|1UEX|B Chain B, Crystal Structure Of Von Willebrand Factor A1 Domain
Complexed With Snake Venom Bitiscetin
Length = 125
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 22/138 (15%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
C PDW + K C+ ++W ++E +CKE+ GGHL ++ S EE KL + +
Sbjct: 4 CLPDW--SSYKGHCYKVFKVEKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKM 61
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
R + +GLS W +W + L + +C + +
Sbjct: 62 -------RIVLVWIGLSHFWRICPLRWTDG-----------ARLDYRALSDEPICFVAES 103
Query: 171 GSRSLVTERCNTSHPFIC 188
+ CN F+C
Sbjct: 104 FHNKWIQWTCNRKKSFVC 121
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 277 LGDSKTGGTY----SGILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
LG+ G + +LP+ + VAVK LK +S +++F E L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWL 356
G C + +V+E++ +G L+R+L
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|2BPD|A Chain A, Structure Of Murine Dectin-1
pdb|2BPD|B Chain B, Structure Of Murine Dectin-1
Length = 142
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAAL-TSYEEEHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + S E E + +N
Sbjct: 17 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 74
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 75 AFWI-GLSRNQSEG-PWFWED 93
>pdb|2BPE|A Chain A, Structure Of Murine Dectin-1
pdb|2BPE|B Chain B, Structure Of Murine Dectin-1
pdb|2BPH|A Chain A, Structure Of Murine Dectin-1
pdb|2BPH|B Chain B, Structure Of Murine Dectin-1
Length = 140
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAAL-TSYEEEHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + S E E + +N
Sbjct: 8 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 65
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 66 AFWI-GLSRNQSEG-PWFWED 84
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 274 NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
R++G + G SG L G R VA+K LK + +++++F E + HPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
++G IV E++ NG LD +L
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|3T3A|A Chain A, Crystal Structure Of H107r Mutant Of Extracellular Domain
Of Mouse Receptor Nkr-P1a
pdb|3T3A|B Chain B, Crystal Structure Of H107r Mutant Of Extracellular Domain
Of Mouse Receptor Nkr-P1a
Length = 139
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
K CP DW+ + KCF +W+E C G L + EE +
Sbjct: 3 KLECPQDWL--SHRDKCFRVSQVSNTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK 60
Query: 110 VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVG-SFNSSCTSLPCHVHATVDLCTLV 168
N W+G R T ++WKW + + ++ + G + N SC ++
Sbjct: 61 YNSFWIGLRY--TLPDMNWKWINGSTLNSDVLKITGDTENDSCAAIS------------- 105
Query: 169 SNGSRSLVTERCNTSHPFICMVE--HENKCYYL 199
+ E CN+ + +IC E HE Y+
Sbjct: 106 ---GDKVTFESCNSDNRWICQKELYHETLSNYV 135
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E++ NG LD +L
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
R++G + G SG L G R VA+K LK + +++++F E + HPN+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV EF+ NG LD +L
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLR 136
>pdb|2CL8|A Chain A, Dectin-1 In Complex With Beta-Glucan
pdb|2CL8|B Chain B, Dectin-1 In Complex With Beta-Glucan
Length = 139
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAAL-TSYEEEHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + S E E + +N
Sbjct: 7 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 64
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 65 AFWI-GLSRNQSEG-PWFWED 83
>pdb|3M9Z|A Chain A, Crystal Structure Of Extracellular Domain Of Mouse Nkr-P1a
Length = 139
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
K CP DW+ + KCF +W+E C G L + EE +
Sbjct: 3 KLECPQDWL--SHRDKCFHVSQVSNTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK 60
Query: 110 VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVG-SFNSSCTSLPCHVHATVDLCTLV 168
N W+G R T ++WKW + + ++ + G + N SC ++
Sbjct: 61 YNSFWIGLRY--TLPDMNWKWINGSTLNSDVLKITGDTENDSCAAIS------------- 105
Query: 169 SNGSRSLVTERCNTSHPFICMVE--HENKCYYL 199
+ E CN+ + +IC E HE Y+
Sbjct: 106 ---GDKVTFESCNSDNRWICQKELYHETLSNYV 135
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGT-YSGILPDGSR---VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLV 328
+++G +G Y + G R VA+K LK +R +++F SE + HPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E++ NG LD +L
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
>pdb|1SL6|A Chain A, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|B Chain B, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|C Chain C, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|D Chain D, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|E Chain E, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|F Chain F, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1XAR|A Chain A, Crystal Structure Of A Fragment Of Dc-Signr (Containing
The Carbohydrate Recognition Domain And Two Repeats Of
The Neck).
pdb|1XAR|B Chain B, Crystal Structure Of A Fragment Of Dc-Signr (Containing
The Carbohydrate Recognition Domain And Two Repeats Of
The Neck)
Length = 184
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 53 CPKDWTFFQ--GNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 110
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 111 SWMGLSDLNQEG--TWQWVD 128
>pdb|2VRP|A Chain A, Structure Of Rhodocytin
pdb|3BX4|A Chain A, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|C Chain C, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 136
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 21/132 (15%)
Query: 66 CFGYIGNFRSWDESETYCK--EIGGHLAALTSYEEEHS-----AQKLCGKNVNGCWVGGR 118
C+ ++WDE+E +C+ E G HLA++ S E +QK + + W+G R
Sbjct: 16 CYQAFNEQKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLR 75
Query: 119 SINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTE 178
+ N S +WSD S E++ + H L L G R V
Sbjct: 76 AQNKEQQCSSEWSDGSSVSYENL------------IDLHTKKCGALEKLT--GFRKWVNY 121
Query: 179 RCNTSHPFICMV 190
C H F+C +
Sbjct: 122 YCEQMHAFVCKL 133
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGT-YSGILPDGSR---VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLV 328
+++G +G Y + G R VA+K LK +R +++F SE + HPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E++ NG LD +L
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLR 142
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 293 GSRVAVKRLK-------RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--V 343
G VAVK LK RS +QR EI L+H ++V KGCC D G++ + V
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 91
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
E+V PL ++PR + A + A + +G+A
Sbjct: 92 MEYV---PLGSLRDYLPR--HCVGLAQLLLFAQQICEGMA 126
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 293 GSRVAVKRLK-------RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIV 343
G VAVK LK RS +QR EI L+H ++V KGCC D G++ +V
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 90
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
E+V PL ++PR + A + A + +G+A
Sbjct: 91 MEYV---PLGSLRDYLPR--HCVGLAQLLLFAQQICEGMA 125
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 337 HGDRYIVYEFVVNGPLDRWLH 357
+V EF+ +G L +L
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR 95
>pdb|1FVU|A Chain A, Crystal Structure Of Botrocetin
pdb|1FVU|C Chain C, Crystal Structure Of Botrocetin
pdb|1IJK|B Chain B, The Von Willebrand Factor Mutant (I546v) A1 Domain-
Botrocetin Complex
pdb|1U0N|B Chain B, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
pdb|1U0O|A Chain A, The Mouse Von Willebrand Factor A1-Botrocetin Complex
Length = 133
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 27/145 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHS-AQKLCGKN 109
CP W E C+ + +W ++E +C E GGHL ++ Y +E L KN
Sbjct: 2 CPSGWSSYE--GNCYKFFQQKMNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKN 59
Query: 110 VNG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLC 165
+ W+G R N S +WSD S E++ V TV C
Sbjct: 60 IQSSDLYAWIGLRVENKEKQCSSEWSDGSSVSYENV----------------VERTVKKC 103
Query: 166 TLVSN--GSRSLVTERCNTSHPFIC 188
+ G + C +PF+C
Sbjct: 104 FALEKDLGFVLWINLYCAQKNPFVC 128
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 258 FTTEELRSITKNFSEG--------NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS- 304
FT E+ + F++ +++G + G SG L G R VA+K LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 305 SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
+ +++++F SE + HPN++ ++G I+ E++ NG LD +L
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
>pdb|2KV3|A Chain A, Human Regenerating Gene Type Iv (Reg Iv) Protein, P91s
Mutant
Length = 131
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHS-AQKLCG-K 108
C P W + KS C+GY R+W ++E C+ G HLA++ S +E + A+ + G +
Sbjct: 3 CAPGWFYH--KSNCYGYFRKLRNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQ 60
Query: 109 NVNGCWVGGRSINTTVGLSWKWSD 132
W+G W+W D
Sbjct: 61 RSQSIWIGLHDPQKRQ--QWQWID 82
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E + NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G IV E + NG LD +L
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLR 109
>pdb|1XPH|A Chain A, Structure Of Dc-Signr And A Portion Of Repeat Domain 8
Length = 150
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 19 CPKDWTFFQ--GNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 76
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 77 SWMGLSDLNQEG--TWQWVD 94
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 36 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 95
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
E+ +G L +L R R L+ +A + A ++
Sbjct: 96 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 130
>pdb|2PY2|A Chain A, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|B Chain B, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|C Chain C, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|D Chain D, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|E Chain E, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|F Chain F, Structure Of Herring Type Ii Antifreeze Protein
Length = 136
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + +CF + W +++ C + G +LA++ S EE ++L ++
Sbjct: 4 CPTDWKMF--NGRCFLFNPLQLHWADAQESCMKEGANLASIHSLEESTFVKELTSADLIP 61
Query: 113 CWVGGRSINTTVGLSWKWSDNMS 135
W+GG V W W D+ S
Sbjct: 62 SWIGGTDCQ--VSTRWFWMDSTS 82
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 43 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
E+ +G L +L R R L+ +A + A ++
Sbjct: 103 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 137
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E + NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 353 DRWLH 357
D +L
Sbjct: 134 DSFLR 138
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 46 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 105
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
E+ +G L +L R R L+ +A + A ++
Sbjct: 106 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 140
>pdb|1MPU|A Chain A, Crystal Structure Of The Free Human Nkg2d Immunoreceptor
Length = 138
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 38 NGQLAASMNKDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
N ++ + + + PCP +WI K+ C+ + ++W ES+ C L + S E
Sbjct: 6 NQEVQIPLTESYCGPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKE 63
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCH 157
+ Q L + W+G I T SW+W D GS S +L
Sbjct: 64 D----QDLLKLVKSYHWMGLVHIPTNG--SWQWED------------GSILS--PNLLTI 103
Query: 158 VHATVDLCTLVSNGSRSLVTERCNTSHPFICM 189
+ C L ++ + + E C+T + +ICM
Sbjct: 104 IEMQKGDCALYASSFKGYI-ENCSTPNTYICM 134
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 293 GSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVN 349
G VAVK LK + Q + + EI L+H +++ KGCC D G +V E+V
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV-- 117
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
PL ++PR S+ A + A + +G+A
Sbjct: 118 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMA 148
>pdb|1HYR|B Chain B, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
pdb|1HYR|A Chain A, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
Length = 137
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 38 NGQLAASMNKDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
N ++ + + + PCP +WI K+ C+ + ++W ES+ C L + S E
Sbjct: 5 NQEVQIPLTESYCGPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKE 62
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCH 157
+ Q L + W+G I T SW+W D GS S +L
Sbjct: 63 D----QDLLKLVKSYHWMGLVHIPTNG--SWQWED------------GSILS--PNLLTI 102
Query: 158 VHATVDLCTLVSNGSRSLVTERCNTSHPFICM 189
+ C L ++ + + E C+T + +ICM
Sbjct: 103 IEMQKGDCALYASSFKGYI-ENCSTPNTYICM 133
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 274 NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
+++G + G SG L G R VA+K LK + +++++F SE + HPN++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G I+ E++ NG LD +L
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLR 101
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 275 RLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVA 329
+++G + G SG L G R VA+K LK + +++++F SE + HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
++G I+ E++ NG LD +L
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLR 107
>pdb|2E3X|C Chain C, Crystal Structure Of Russell's Viper Venom
Metalloproteinase
Length = 122
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
CP W+ E+ C+ + ++W ++E +C E G HL +L S EEE L +N+
Sbjct: 3 CPSGWLSYEQH--CYKGFNDLKNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENL 60
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNE 139
T +GL W D +W++
Sbjct: 61 -------EYPATWIGLGNMWKDCRMEWSD 82
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGILP--DGS--RVAVK--RLKRSSFQRKKEFYSEIGRF 319
I +N ++LG+ + G G L DG+ +VAVK +L SS + +EF SE
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 320 ARLHHPNLVAVKGCCYDHGDR-----YIVYEFVVNGPLDRWLHH--IPRGGRSLDWAMRM 372
HPN++ + G C + + ++ F+ G L +L + + G + + +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 373 KVATTLAQGI 382
K +A G+
Sbjct: 151 KFMVDIALGM 160
>pdb|1K9J|A Chain A, Complex Of Dc-signr And Glcnac2man3
pdb|1K9J|B Chain B, Complex Of Dc-signr And Glcnac2man3
Length = 139
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 8 CPKDWTF--FQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 65
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 66 SWMGLSDLNQEG--TWQWVD 83
>pdb|1FM5|A Chain A, Crystal Structure Of Human Cd69
Length = 199
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 39 GQLAASMNKDWK-APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
GQ SM D + C DW+ + K C+ RSW ++ C E G LA + S +
Sbjct: 70 GQYTFSMPSDSHVSSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEK 127
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ + ++ G+ + WVG + G WKWS N ++N + GS
Sbjct: 128 DMNFLKRYAGREEH--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 170
>pdb|2E3X|B Chain B, Crystal Structure Of Russell's Viper Venom
Metalloproteinase
Length = 134
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKL----C 106
CPPD + + C+ ++W+ +E +C E GHL ++ S EE KL
Sbjct: 3 CPPDSSLY--RYFCYRVFKEHKTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTT 60
Query: 107 GKNVNGCWVGGRSINTTVGLSWKWSDNMS 135
GK + W+G + S +WSD S
Sbjct: 61 GKFITHFWIGLMIKDKEQECSSEWSDGSS 89
>pdb|1EGG|A Chain A, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGG|B Chain B, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGI|A Chain A, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGI|B Chain B, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
Length = 147
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 53 CPPDWIINEEKSKCFGYIGNFR----SWDESETYCKEIGGHLAALTSYEEEHSAQKL 105
CP DW + S CF + +W ES +C+ +GG LA++ + EE+ + +L
Sbjct: 5 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRL 61
>pdb|1JZN|A Chain A, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|B Chain B, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|C Chain C, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|D Chain D, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|E Chain E, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1MUQ|A Chain A, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|B Chain B, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|C Chain C, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|D Chain D, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|E Chain E, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
Length = 135
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCG--- 107
CP DW+ C+ ++W+++E +C++ G HLA+ Y E +
Sbjct: 3 CPLDWL--PMNGLCYKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYH 60
Query: 108 KNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTL 167
K W+G R + SW+W+D + + + + P H L
Sbjct: 61 KGQENVWIGLR--DKKKDFSWEWTD---------RSCTDYLTWDKNQPDHYQNKEFCVEL 109
Query: 168 VS-NGSRSLVTERCNTSHPFICMVE 191
VS G R + C + F+C +
Sbjct: 110 VSLTGYRLWNDQVCESKDAFLCQCK 134
>pdb|3UBU|A Chain A, Crystal Structure Of Agkisacucetin, A Gpib-Binding Snaclec
(Snake C- Type Lectin) That Inhibits Platelet
Length = 131
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 20/140 (14%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKN- 109
C P W ++ C+ ++WD++E +C E GGHL ++ S E +L +N
Sbjct: 4 CLPGWSAYDQS--CYRVFKLLKTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENK 61
Query: 110 -VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLV 168
+ W+G + + S +W+D S E+ S S C V
Sbjct: 62 QTDNVWLGLKIQSKGQQCSTEWTDGSSVSYENF-------SEYQSKKCFVLEK------- 107
Query: 169 SNGSRSLVTERCNTSHPFIC 188
+ G R+ + C + + F+C
Sbjct: 108 NTGFRTWLNLNCGSEYSFVC 127
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEF 312
P+W++ E ++ + K LG + G + G + ++VAVK LK + + F
Sbjct: 5 PAWEI-PRESIKLVKK--------LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-F 54
Query: 313 YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRM 372
E L H LV + YI+ EF+ G L +L GG+ L +
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS-DEGGKVL-LPKLI 112
Query: 373 KVATTLAQGIA 383
+ +A+G+A
Sbjct: 113 DFSAQIAEGMA 123
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 268 KNFSEGNRLLGDSKTGGTYS----GILP--DGSRVAVKRLKR-SSFQRKKEFYSEIGRFA 320
+N E R +G+ G + G+LP + VAVK LK +S + +F E A
Sbjct: 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+PN+V + G C +++E++ G L+ +L +
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM 144
>pdb|3GPR|D Chain D, Crystal Structure Of Rhodocetin
Length = 124
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC--KEIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W + C+ ++W+++E++C + G LA++ S EEE KL + +
Sbjct: 1 CPLHW--SSYNGYCYRVFSELKTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTL 58
Query: 111 N--GCWVGGRSINTTVGLSWKWSDN 133
W+G N W+WSD+
Sbjct: 59 KYTSMWLGLN--NAWAACKWEWSDD 81
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++L+H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 152 LAMLDLLHVARDIACG 167
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSR-VAVKRLKRSSFQRK---KEFYSEIGRF 319
R T + E R LG K G Y VA+K L +S +++ + EI
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
A LHHPN++ + YD Y++ E+ G L + L
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ 115
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++L+H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 138 LAMLDLLHVARDIACG 153
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
+ +I+ EF G +D + + R
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER 130
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
+ +I+ EF G +D + + R
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER 130
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPR 361
+ +I+ EF G +D + + R
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER 130
>pdb|3UBU|B Chain B, Crystal Structure Of Agkisacucetin, A Gpib-Binding Snaclec
(Snake C- Type Lectin) That Inhibits Platelet
Length = 126
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 21/138 (15%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
CP W E C+ + ++WD++E +C E GGHL ++ S EE L +
Sbjct: 4 CPLRWSAYE--GHCYLVVKEKKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPIL 61
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
+ + +GLS W+D +W++ F S + C + T +
Sbjct: 62 DLSLIW-------MGLSNMWNDCKREWSDGTKL--DFKSWAKTSDCLIGKT--------D 104
Query: 171 GSRSLVTERCNTSHPFIC 188
G + C+ H F+C
Sbjct: 105 GDNQWLNMDCSKKHYFVC 122
>pdb|3HUP|A Chain A, High-Resolution Structure Of The Extracellular Domain Of
Human Cd69
pdb|3HUP|B Chain B, High-Resolution Structure Of The Extracellular Domain Of
Human Cd69
Length = 130
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 39 GQLAASMNKDWK-APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
GQ SM D + C DW+ + K C+ RSW ++ C E G LA + S +
Sbjct: 1 GQYTFSMPSDSHVSSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEK 58
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ + ++ G+ + WVG + G WKWS N ++N + GS
Sbjct: 59 DMNFLKRYAGREEH--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 101
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 294 SRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
+ V +K L ++ + F+ ++L H +LV G C+ + +V EFV G LD
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD 100
Query: 354 RWLHHIP---------RGGRSLDWAMRMKVATTLAQG 381
+L + L WAM TL G
Sbjct: 101 TYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHG 137
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 277 LGDSKTGGTYSGIL-PDGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G G +SG L D + VAVK + + K +F E + HPN+V + G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 335 YDHGDRYIVYEFVVNG 350
YIV E V G
Sbjct: 182 TQKQPIYIVMELVQGG 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRSSFQ 307
PS +LR + + + ++LG G Y GI +P+G V A+K L ++
Sbjct: 22 PSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP 81
Query: 308 RKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
+ EF E A + HP+LV + G C + +V + + +G L ++H
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE 132
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 277 LGDSKTGGTYSGIL-PDGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G G +SG L D + VAVK + + K +F E + HPN+V + G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 335 YDHGDRYIVYEFVVNG 350
YIV E V G
Sbjct: 182 TQKQPIYIVMELVQGG 197
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 295 RVAVK---RLKRSSFQRKKEFYSEIGRFAR-------LHHPNLVAVKGCCYDHGDRYIVY 344
++AV+ R++R++ + K F ++ RF + L HPN++ + D+ D Y+V
Sbjct: 26 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85
Query: 345 EFVVNGPL-DRWLHHIPRGGRSLDWAMRMK 373
E G L +R +H R R D A MK
Sbjct: 86 ELCTGGELFERVVHK--RVFRESDAARIMK 113
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 293 GSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VA+K+ S + KK EI +L H NLV + C Y+V+EFV +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
LD L P G LD+ + K + GI
Sbjct: 110 ILDD-LELFPNG---LDYQVVQKYLFQIINGIG 138
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 137 LAMLDLLHVARDIACG 152
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 137 LAMLDLLHVARDIACG 152
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 295 RVAVK---RLKRSSFQRKKEFYSEIGRFAR-------LHHPNLVAVKGCCYDHGDRYIVY 344
++AV+ R++R++ + K F ++ RF + L HPN++ + D+ D Y+V
Sbjct: 43 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 102
Query: 345 EFVVNGPL-DRWLHHIPRGGRSLDWAMRMK 373
E G L +R +H R R D A MK
Sbjct: 103 ELCTGGELFERVVHK--RVFRESDAARIMK 130
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 138 LAMLDLLHVARDIACG 153
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 292 DGSRVAVKRLK--RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
DG + +K + R S + ++E E+ A + HPN+V + ++G YIV ++
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 350 GPLDRWLHH----IPRGGRSLDWAMRMKVA 375
G L + ++ + + + LDW +++ +A
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLA 137
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 129 LAMLDLLHVARDIACG 144
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 154 LAMLDLLHVARDIACG 169
>pdb|1KCG|A Chain A, Nkg2d In Complex With Ulbp3
pdb|1KCG|B Chain B, Nkg2d In Complex With Ulbp3
Length = 124
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 23/139 (16%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
PCP +WI K+ C+ + ++W ES+ C L + S E+ Q L
Sbjct: 5 GPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKED----QDLLKLVK 58
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
+ W+G I T SW+W D GS S +L + C L ++
Sbjct: 59 SYHWMGLVHIPTNG--SWQWED------------GSILS--PNLLTIIEMQKGDCALYAS 102
Query: 171 GSRSLVTERCNTSHPFICM 189
+ + E C+T + +ICM
Sbjct: 103 SFKGYI-ENCSTPNTYICM 120
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 178 LAMLDLLHVARDIACG 193
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 152 LAMLDLLHVARDIACG 167
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 138 LAMLDLLHVARDIACG 153
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR-VAVKRL 301
+ P ++LVP W + R +F E LG T Y + A+K L
Sbjct: 30 AAPGTASLVPDYWIDGSN---RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
Query: 302 KRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DR 354
K++ KK +EIG RL HPN++ +K + +V E V G L DR
Sbjct: 87 KKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR 138
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 155 LAMLDLLHVARDIACG 170
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
VA+K+++ S +K F E+ + +R++HPN+V + G C + +V E+ G L
Sbjct: 35 VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNV 90
Query: 356 LHHIPRGGRSLDW---AMRMKVATTLAQGIA 383
LH G L + A M +QG+A
Sbjct: 91 LH----GAEPLPYYTAAHAMSWCLQCSQGVA 117
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREM 98
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREM 113
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 144 LAMLDLLHVARDIACG 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREM 97
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 152 LAMLDLLHVARDIACG 167
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 82 QRPIFIITEYMANGCLLNYLREM 104
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREM 113
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 10/136 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 368 WAM--RMKVATTLAQG 381
AM + VA +A G
Sbjct: 164 LAMLDLLHVARDIACG 179
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
VA+K+++ S +K F E+ + +R++HPN+V + G C + +V E+ G L
Sbjct: 34 VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNV 89
Query: 356 LHHIPRGGRSLDW---AMRMKVATTLAQGIA 383
LH G L + A M +QG+A
Sbjct: 90 LH----GAEPLPYYTAAHAMSWCLQCSQGVA 116
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 353 DRWLHHIPRG------GRSLDWAMRMKVATTLAQGIA 383
+L GR L+ + ++ +AQG+A
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA 166
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 262 ELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLK-RSSFQRKKEFYS 314
+L+ I+ + LG+ + G Y G L VA+K LK ++ ++EF
Sbjct: 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
E ARL HPN+V + G +++ + +G L +L
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKK 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREM 98
>pdb|1HQ8|A Chain A, Crystal Structure Of The Murine Nk Cell-Activating
Receptor Nkg2d At 1.95 A
pdb|1JSK|A Chain A, Crystal Structure Of Murine Nk Cell Ligand Rae-1 Beta In
Complex With Nkg2d
pdb|1JSK|B Chain B, Crystal Structure Of Murine Nk Cell Ligand Rae-1 Beta In
Complex With Nkg2d
Length = 123
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
PCP +WI + ++ C+ + ++W++S+ C L + S EE+ + + +
Sbjct: 4 GPCPNNWICH--RNNCYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYH- 60
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
W+G + SW+W D S + V SC V
Sbjct: 61 ---WMG--LVQIPANGSWQWEDGSSLSYNQLTLVEIPKGSCA---------------VYG 100
Query: 171 GSRSLVTERCNTSHPFICM 189
S TE C + +ICM
Sbjct: 101 SSFKAYTEDCANLNTYICM 119
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 337 HGDRYIVYEFVVNGPLDRWLHHI 359
+I+ E++ NG L +L +
Sbjct: 71 QRPIFIITEYMANGCLLNYLREM 93
>pdb|3VLG|A Chain A, Crystal Structure Of The W150a Mutant Lox-1 Ctld Showing
Impaired Oxldl Binding
Length = 145
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
APCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 14 APCPQDWIAHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS 71
Query: 111 NGCWVGGRSINTTVGLSWKWSD 132
W+G N + W W D
Sbjct: 72 FPFWMGLSRRNPSY--PWLWED 91
>pdb|2LS8|A Chain A, Solution Structure Of Human C-Type Lectin Domain Family 4
Member D
Length = 156
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW +S C+ + + ++W ESE C +G HL +++ E++ + + +
Sbjct: 3 CPIDW--RAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRL-S 59
Query: 113 CWVGGRSINTTVGLSWKWSD 132
++G R N W+W D
Sbjct: 60 YFLGLRDENAKG--QWRWVD 77
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 262 ELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLK-RSSFQRKKEFYS 314
+L+ I+ + LG+ + G Y G L VA+K LK ++ ++EF
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
E ARL HPN+V + G +++ + +G L +L
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRG------GRSLDWAMRMKVATTLAQGIA 383
+L GR L+ + ++ +AQG+A
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMA 174
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 268 KNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLH 323
++F GN LLG G Y + G VA+K + + + + + +E+ +L
Sbjct: 11 EDFKVGN-LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
HP+++ + D Y+V E NG ++R+L
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|1UKM|A Chain A, Crystal Structure Of Ems16, An Antagonist Of Collagen
Receptor Integrin Alpha2beta1 (GpiaIIA)
pdb|1V7P|A Chain A, Structure Of Ems16-Alpha2-I Domain Complex
Length = 134
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
CP DW ++ C+ IG ++W E+E +C E GHL ++ S EE + +L +
Sbjct: 4 CPSDWTAYDQH--CYLAIGEPQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFM 61
Query: 111 NG----CWVGGRSINTTVGLSWKWSD 132
+ W+G R + +W+D
Sbjct: 62 HRSEIYVWIGLRDRREEQQCNPEWND 87
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
L +L R LD + + ++ + +G+
Sbjct: 100 CLRDFLQ---RHRARLDASRLLLYSSQICKGM 128
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
L +L R LD + + ++ + +G+
Sbjct: 99 CLRDFLQ---RHRARLDASRLLLYSSQICKGM 127
>pdb|1TDQ|B Chain B, Structural Basis For The Interactions Between Tenascins
And The C-Type Lectin Domains From Lecticans: Evidence
For A Cross-Linking Role For Tenascins
Length = 130
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 63 KSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGC-WVGGRSIN 121
+ C+ + + +W ++E C+E HL+++ + EE Q+ KN W+G +
Sbjct: 15 QGHCYRHFPDRETWVDAERRCREQQSHLSSIVTPEE----QEFVNKNAQDYQWIGLN--D 68
Query: 122 TTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTE-RC 180
T+ ++WSD S F + P + AT + C ++ R + C
Sbjct: 69 RTIEGDFRWSDGHSL---------QFEKWRPNQPDNFFATGEDCVVMIWHERGEWNDVPC 119
Query: 181 NTSHPFIC 188
N PF C
Sbjct: 120 NYQLPFTC 127
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC--CYDHGDR--------- 340
DG +KR+K ++ + ++E + A+L H N+V GC +D+
Sbjct: 35 DGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 341 -----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+I EF G L++W+ R G LD + +++ + +G+
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGV 135
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
L +L R LD + + ++ + +G+
Sbjct: 112 CLRDFLQ---RHRARLDASRLLLYSSQICKGM 140
>pdb|1E87|A Chain A, Human Cd69 - Trigonal Form
pdb|1E8I|A Chain A, Human Cd69-Tetragonal Form
pdb|1E8I|B Chain B, Human Cd69-Tetragonal Form
pdb|3CCK|A Chain A, Human Cd69
pdb|3CCK|B Chain B, Human Cd69
Length = 118
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
+ C DW+ + K C+ RSW ++ C E G LA + S ++ + ++ G+
Sbjct: 2 SSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE 59
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ WVG + G WKWS N ++N + GS
Sbjct: 60 H--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 89
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 262 ELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRSSFQRKK-EFYSE 315
+LR + + + ++LG G Y GI +P+G V A+K L ++ + EF E
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 67
Query: 316 IGRFARLHHPNLVAVKGCC 334
A + HP+LV + G C
Sbjct: 68 ALIMASMDHPHLVRLLGVC 86
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
L +L R LD + + ++ + +G+
Sbjct: 96 CLRDFLQ---RHRARLDASRLLLYSSQICKGM 124
>pdb|1YPO|A Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|C Chain C, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|D Chain D, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|E Chain E, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|F Chain F, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|G Chain G, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|H Chain H, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
Length = 132
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
APCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 2 APCPQDWIWHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS 59
Query: 111 NGCWVGGRSINTTVGLSWKWSD 132
W+G N + W W D
Sbjct: 60 FPFWMGLSRRNPSY--PWLWED 79
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G ++A K +K + K+E +EI +L H NL+ + D +V E+V G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 353 -DRWL 356
DR +
Sbjct: 174 FDRII 178
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 294 SRVAVKRLKRSSFQRKK-------------EFYSEIGRFARLHHPNLVAVKGCCYDHGDR 340
S A+K +K+S F + + E Y+EI L HPN++ + D
Sbjct: 62 SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121
Query: 341 YIVYEFVVNGPL 352
Y+V EF G L
Sbjct: 122 YLVTEFYEGGEL 133
>pdb|1UOS|B Chain B, The Crystal Structure Of The Snake Venom Toxin Convulxin
pdb|1UOS|D Chain D, The Crystal Structure Of The Snake Venom Toxin Convulxin
Length = 126
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC--KEIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W + C+ +W ++E +C + G HL + S EE K+ +++
Sbjct: 5 CPSHW--SSYDRYCYKVFKQEMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSL 62
Query: 111 NGC--WVGGRSINTTVGLSWKWSD----NMSKWNESIHAVGS--FNSSCTSLPC 156
W+G +I +W+WSD +W+E + S F++ S PC
Sbjct: 63 KSTFFWIGANNIWNKC--NWQWSDGTKPEYKEWHEEFECLISRTFDNQWLSAPC 114
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG+ + G + G ++VA+K LK + + F E +L H LV + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS-PESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
YIV E++ G L +L GR+L + +A +A G+A
Sbjct: 76 E-PIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMA 119
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G + +K L R + ++ F E+ L HPN++ G Y + E++ G L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 353 DRWLHHIPRGGRSLD----WAMRMKVATTLAQGIA 383
+ +S+D W+ R+ A +A G+A
Sbjct: 95 RGII-------KSMDSQYPWSQRVSFAKDIASGMA 122
>pdb|1UMR|C Chain C, Crystal Structure Of The Platelet Activator Convulxin, A
Disulfide Linked A4b4 Cyclic Tetramer From The Venom Of
Crotalus Durissus Terrificus
pdb|1UMR|D Chain D, Crystal Structure Of The Platelet Activator Convulxin, A
Disulfide Linked A4b4 Cyclic Tetramer From The Venom Of
Crotalus Durissus Terrificus
Length = 125
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC--KEIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W + C+ +W ++E +C + G HL + S EE K+ +++
Sbjct: 4 CPSHW--SSYDRYCYKVFKQEMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSL 61
Query: 111 NGC--WVGGRSINTTVGLSWKWSD----NMSKWNESIHAVGS--FNSSCTSLPC 156
W+G +I +W+WSD +W+E + S F++ S PC
Sbjct: 62 KSTFFWIGANNIWNKC--NWQWSDGTKPEYKEWHEEFECLISRTFDNQWLSAPC 113
>pdb|1YPQ|A Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1
Dioxane Complex
pdb|1YPQ|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1
Dioxane Complex
pdb|1YPU|A Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 C2
Space Group
pdb|1YPU|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 C2
Space Group
pdb|1YXK|A Chain A, Crystal Structure Of Human Lectin-Like Oxidized
Low-Density Lipoprotein Receptor 1 (Lox-1)
Disulfide-Linked Dimer
pdb|1YXK|B Chain B, Crystal Structure Of Human Lectin-Like Oxidized
Low-Density Lipoprotein Receptor 1 (Lox-1)
Disulfide-Linked Dimer
Length = 135
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
APCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 7 APCPQDWIWHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS 64
Query: 111 NGCWVGGRSINTTVGLSWKWSD 132
W+G N + W W D
Sbjct: 65 FPFWMGLSRRNPSY--PWLWED 84
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 294 SRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
+ V +K L ++ + F+ ++L H +LV G C + +V EFV G LD
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100
Query: 354 RWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+L + ++ +++VA LA +
Sbjct: 101 TYLK---KNKNCINILWKLEVAKQLAAAM 126
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 275 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+++G+ G + L + VA+K++ + + +E +I R + HPN+V +K
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL--QIMRIVK--HPNVVDLKAFF 101
Query: 335 YDHGDR 340
Y +GD+
Sbjct: 102 YSNGDK 107
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G +VAVK++ QR++ ++E+ HH N+V + + ++V EF+ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 353 DRWLHH 358
+ H
Sbjct: 130 TDIVTH 135
>pdb|1WT9|A Chain A, Crystal Structure Of Aa-X-Bp-I, A Snake Venom Protein With
The Activity Of Binding To Coagulation Factor X From
Agkistrodon Acutus
Length = 129
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 66 CFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNVNGC----WVGGRS 119
C+ ++W ++E++C K++ GGHL ++ S E +L + + W+G R+
Sbjct: 13 CYKVFKQSKTWTDAESFCTKQVNGGHLVSIESSGEADFVGQLIAQKIKSAKIHVWIGLRA 72
Query: 120 INTTVGLSWKWSDNMS 135
N S +WSD S
Sbjct: 73 QNKEKQCSIEWSDGSS 88
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 352 LDRWLH 357
L +L
Sbjct: 162 LREYLQ 167
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH 357
L +L
Sbjct: 121 LREYLQ 126
>pdb|3BX4|B Chain B, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|D Chain D, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 146
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCK--EIGGHLAALTSYEEEHSAQKLCGK 108
A CP W E C+ ++W ++E +CK HL + S EE KL
Sbjct: 23 ADCPSGWSSYE--GHCYKPFNEPKNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRP 80
Query: 109 NV--NGCWVGGRSINTTVGLSWKWSD----NMSKWNE 139
+ N W+G N G +W+WSD N W E
Sbjct: 81 RLKANLVWMGLS--NIWHGCNWQWSDGARLNYKDWQE 115
>pdb|1IOD|A Chain A, Crystal Structure Of The Complex Between The Coagulation
Factor X Binding Protein From Snake Venom And The Gla
Domain Of Factor X
Length = 129
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 66 CFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNVNGC----WVGGRS 119
C+ ++W ++E++C K++ GGHL ++ S E +L + + W+G R+
Sbjct: 13 CYKVFKQSKTWADAESFCTKQVNGGHLVSIESSGEADFVGQLIAQKIKSAKIHVWIGLRA 72
Query: 120 INTTVGLSWKWSDNMS 135
N S +WSD S
Sbjct: 73 QNKEKQCSIEWSDGSS 88
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRK-KEFYSEIGRFARL 322
SI ++ E ++G T + P +VA+KR+ Q E EI ++
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR 364
HHPN+V+ + ++V + + G + + HI G
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE 112
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRK-KEFYSEIGRFARL 322
SI ++ E ++G T + P +VA+KR+ Q E EI ++
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR 364
HHPN+V+ + ++V + + G + + HI G
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE 107
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH 357
L +L
Sbjct: 121 LREYLQ 126
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH 357
L +L
Sbjct: 121 LREYLQ 126
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH 357
L +L
Sbjct: 121 LREYLQ 126
>pdb|1Y17|A Chain A, Crystal Structure Of Aa-X-Bp-Ii, A Snake Venom Protein
With The Activity Of Binding To Coagulation Factor X
From Agkistrodon Acutus
Length = 129
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 66 CFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNVNGC----WVGGRS 119
C+ ++W ++E++C K++ GGHL ++ S E L + + W+G R+
Sbjct: 13 CYKAFKQSKTWADAESFCTKQVNGGHLVSIESSGEADFVAHLIAQKIKSAKIHVWIGLRA 72
Query: 120 INTTVGLSWKWSDNMS 135
N S +WSD S
Sbjct: 73 QNKEKQCSIEWSDGSS 88
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 352 LDRWLH 357
L +L
Sbjct: 114 LREYLQ 119
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 352 LDRWLH 357
L +L
Sbjct: 113 LREYLQ 118
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 352 LDRWLH 357
L +L
Sbjct: 110 LREYLQ 115
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 352 LDRWLH 357
L +L
Sbjct: 106 LREYLQ 111
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
A K + S + +++ EI A HPN+V + Y + +I+ EF G +D +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 357 HHIPR 361
+ R
Sbjct: 99 LELER 103
>pdb|3ALS|A Chain A, Crystal Structure Of Cel-Iv
pdb|3ALS|B Chain B, Crystal Structure Of Cel-Iv
pdb|3ALS|C Chain C, Crystal Structure Of Cel-Iv
pdb|3ALS|D Chain D, Crystal Structure Of Cel-Iv
pdb|3ALT|A Chain A, Crystal Structure Of Cel-Iv Complexed With Melibiose
pdb|3ALT|B Chain B, Crystal Structure Of Cel-Iv Complexed With Melibiose
pdb|3ALT|C Chain C, Crystal Structure Of Cel-Iv Complexed With Melibiose
pdb|3ALT|D Chain D, Crystal Structure Of Cel-Iv Complexed With Melibiose
pdb|3ALU|A Chain A, Crystal Structure Of Cel-Iv Complexed With Raffinose
pdb|3ALU|B Chain B, Crystal Structure Of Cel-Iv Complexed With Raffinose
pdb|3ALU|C Chain C, Crystal Structure Of Cel-Iv Complexed With Raffinose
pdb|3ALU|D Chain D, Crystal Structure Of Cel-Iv Complexed With Raffinose
Length = 157
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG-----------GHLAALTSYEEEHS 101
CPP W KCF N ++D +E C++ G GHLA++ S E +
Sbjct: 5 CPPLWT--GFNGKCFRLFHNHLNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAF 62
Query: 102 AQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNE 139
+L ++ GG + +G+ +++ W +
Sbjct: 63 LTELVKTSLPDLITGGWAPQVYIGMKVGSTNSDQTWTD 100
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 272 EGNRLLGDSKTG----GTYSGILPDGS--RVAVKRLKRSSFQRKKE-FYSEIGRFARL-H 323
E ++LG G T GI G +VAVK LK + ++E SE+ +L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
H N+V + G C G Y+++E+ G L +L
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHH 358
+L
Sbjct: 116 FLRE 119
>pdb|2VUV|A Chain A, Crystal Structure Of Codakine At 1.3a Resolution
pdb|2VUZ|A Chain A, Crystal Structure Of Codakine In Complex With Biantennary
Nonasaccharide At 1.7a Resolution
Length = 129
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN- 111
CP W + C+ Y SW +++ C+ +GG LA + E +C +N +
Sbjct: 2 CPDGWT--QFLDLCYIYQSAKASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDA 59
Query: 112 ---GCWVGGRSINTTVGLSWKWS 131
G W+GG+ VG +W+WS
Sbjct: 60 GSFGPWLGGQ----KVGGAWQWS 78
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHH 358
+L
Sbjct: 116 FLRE 119
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHH 358
+L
Sbjct: 116 FLRE 119
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 290 LPDGSRVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 346
L DG VA+K+++ K + EI +L+HPN++ + + IV E
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113
Query: 347 VVNGPLDRWLHHIPRGGR 364
G L R + H + R
Sbjct: 114 ADAGDLSRMIKHFKKQKR 131
>pdb|2YHF|A Chain A, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|B Chain B, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|C Chain C, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|D Chain D, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|E Chain E, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|F Chain F, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|G Chain G, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|H Chain H, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|I Chain I, 1.9 Angstrom Crystal Structure Of Clec5a
Length = 118
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKL 105
CP DW + ++CF + SW+ES +CK G LA + + E+ Q +
Sbjct: 2 CPKDWEFYQ--ARCFFLSTSESSWNESRDFCKGKGSTLAIVNTPEKLKFLQDI 52
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNGPL 352
++ Y EI +L HPN+V + D + Y+V+E V GP+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV 125
>pdb|1GZ2|A Chain A, Crystal Structure Of The Ovocleidin-17 A Major Protein Of
The Gallus Gallus Eggshell Calcified Layer
Length = 142
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKL----- 105
C P W+ C G+ SW +E++C+ G HLAA+ S E +L
Sbjct: 5 CGPGWVPT--PGGCLGFFSRELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNAXR 62
Query: 106 ----CGKNVNG-CWVGGRSINTTVG-LSWKWSDNMSKWNESIH 142
G+ +G W+G ++ G SW+WSD + S H
Sbjct: 63 GGDGSGEGADGRVWIG---LHRPAGSRSWRWSDGTAPRFASWH 102
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 353 DRWLH--------------HIPRG-----GRSLDWAMRMKVATTLAQGIA 383
+L P G GR L+ + ++ +AQG+A
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMA 172
>pdb|3GPR|C Chain C, Crystal Structure Of Rhodocetin
Length = 134
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
C P W ++ C+ ++WDE+E +C E GHL ++ S E +L N+
Sbjct: 3 CLPGWSAYDQH--CYQAFNEPKTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNI 60
Query: 111 NG----CWVGGRSINTTVGLSWKWS 131
W+G R S +WS
Sbjct: 61 KRPELYVWIGLRDRRKEQQCSSEWS 85
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 354 RWLH 357
+L
Sbjct: 122 EYLR 125
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 354 RWLH 357
+L
Sbjct: 176 EYLR 179
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 354 RWLH 357
+L
Sbjct: 119 EYLR 122
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 354 RWLH 357
+L
Sbjct: 117 EYLR 120
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLA 379
L+ + R R L+ +A + A
Sbjct: 138 ---LNFLRRKSRVLETDPAFAIANSTA 161
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 23 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 78
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 114
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 19 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 74
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 110
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 273 GNRL-LGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
G+R+ LG G Y+G L + R+A+K + + + + EI L H N+V
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWL 356
G ++G I E V G L L
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALL 110
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 273 GNRL-LGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
G+R+ LG G Y+G L + R+A+K + + + + EI L H N+V
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWL 356
G ++G I E V G L L
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALL 96
>pdb|2VRP|B Chain B, Structure Of Rhodocytin
Length = 123
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCK--EIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W E C+ ++W ++E +CK HL + S EE KL +
Sbjct: 2 CPSGWSSYE--GHCYKPFNEPKNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRL 59
Query: 111 --NGCWVGGRSINTTVGLSWKWSD----NMSKWNE 139
N W+G +I G +W+WSD N W E
Sbjct: 60 KANLVWMGLSNI--WHGCNWQWSDGARLNYKDWQE 92
>pdb|2H2R|A Chain A, Crystal Structure Of The Human Cd23 Lectin Domain, Apo
Form
pdb|2H2R|B Chain B, Crystal Structure Of The Human Cd23 Lectin Domain, Apo
Form
pdb|2H2T|B Chain B, Cd23 Lectin Domain, Calcium 2+-Bound
Length = 175
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP WI + KC+ + + W + C ++ G L ++ S EE+ K G
Sbjct: 17 CPEKWI--NFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKRASH--TG 72
Query: 113 CWVGGRSINTTVGLSW 128
W+G R+++ W
Sbjct: 73 SWIGLRNLDLKGEFIW 88
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 273 GNRLLGDSKTGGTYSGILP-----DGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH 75
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
P+++ + D ++V E+V G L +I + GR LD ++ + G+
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGEL---FDYICKNGR-LDEKESRRLFQQILSGV 129
>pdb|1YXJ|A Chain A, Crystal Structure Of Human Lectin-like Oxidized
Low-density Lipoprotein Receptor 1 (lox-1) At Low Ph
pdb|1YXJ|B Chain B, Crystal Structure Of Human Lectin-like Oxidized
Low-density Lipoprotein Receptor 1 (lox-1) At Low Ph
Length = 130
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 2 PCPQDWIWHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSF 59
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W G N + W W D
Sbjct: 60 PFWXGLSRRNPSY--PWLWED 78
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 28 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 83
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 119
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 30 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 85
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 121
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + + + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATT 377
L+ + R R L+ +A +
Sbjct: 138 ---LNFLRRKSRVLETDPAFAIANS 159
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G VA+KR++ + EI LHHPN+V++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 335 YDHGDRYIVYEFV 347
+ +V+EF+
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G VA+KR++ + EI LHHPN+V++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 335 YDHGDRYIVYEFV 347
+ +V+EF+
Sbjct: 89 HSERCLTLVFEFM 101
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L
Sbjct: 62 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 73 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 128
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 164
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYE 345
+P G A K + + + ++ R AR L HPN+V + + G Y+V++
Sbjct: 26 IPTGQEYAAKIINTKKLSARD--HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 346 FVVNGPL 352
V G L
Sbjct: 84 LVTGGEL 90
>pdb|1T8C|A Chain A, Structure Of The C-Type Lectin Domain Of Cd23
pdb|1T8D|A Chain A, Structure Of The C-Type Lectin Domain Of Cd23
pdb|4EZM|G Chain G, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
pdb|4EZM|H Chain H, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
pdb|4EZM|I Chain I, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
pdb|4EZM|J Chain J, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
pdb|4EZM|K Chain K, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
pdb|4EZM|L Chain L, Crystal Structure Of The Human Ige-Fc(Epsilon)3-4 Bound To
Its B Cell Receptor Dercd23
Length = 143
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP WI + KC+ + + W + C ++ G L ++ S EE+ K + G
Sbjct: 8 CPEKWI--NFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKH--ASHTG 63
Query: 113 CWVGGRSINTTVGLSW 128
W+G R+++ W
Sbjct: 64 SWIGLRNLDLKGEFIW 79
>pdb|1C3A|A Chain A, Crystal Structure Of Flavocetin-A From The Habu Snake
Venom, A Novel Cyclic Tetramer Of C-Type Lectin-Like
Heterodimers
Length = 135
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
C P W + C+ ++W+++E++C+E HL ++ S E +L + +
Sbjct: 4 CIPGWSAYDRY--CYQAFSKPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKI 61
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSL 154
W+G R N +WSD S E++ V F+ C +L
Sbjct: 62 KTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENL--VKQFSKKCYAL 107
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 273 GNRLLGDSKTGGTYSGI-----LPDGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
P+++ + D ++V E+V G L ++
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR 340
G VA+K++ + R +E + A LHHPN+V ++ Y G+R
Sbjct: 48 GMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYTLGER 94
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 269 NFSEGNRL--LGDSKTGGTYSGILPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHH 324
+F + N L L ++ +G + G G+ + VK LK S ++ ++F E R H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 325 PNLVAVKGCCYDHGDRY--IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
PN++ V G C + ++ ++ G L LH +D + +K A +A+G+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGM 124
Query: 383 A 383
A
Sbjct: 125 A 125
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G+ A K + K+ EI + L HP LV + D + ++YEF+ G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
>pdb|1V4L|A Chain A, Crystal Structure Of A Platelet Agglutination Factor
Isolated From The Venom Of Taiwan Habu (Trimeresurus
Mucrosquamatus)
pdb|1V4L|C Chain C, Crystal Structure Of A Platelet Agglutination Factor
Isolated From The Venom Of Taiwan Habu (Trimeresurus
Mucrosquamatus)
pdb|1V4L|E Chain E, Crystal Structure Of A Platelet Agglutination Factor
Isolated From The Venom Of Taiwan Habu (Trimeresurus
Mucrosquamatus)
Length = 135
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 26/144 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
C P W + C+ ++W+++E++C+E HL ++ S E +L + +
Sbjct: 4 CIPGWSAYDRY--CYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKI 61
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCT 166
W+G R N +WSD S E+++ S C
Sbjct: 62 KTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSS----------------KKCY 105
Query: 167 LVSNGS--RSLVTERCNTSHPFIC 188
+ G+ R+ C +PF+C
Sbjct: 106 ALKKGTELRTWFNVYCGRENPFVC 129
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 273 GNRLLGDSKTGGTYSGI-----LPDGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
P+++ + D ++V E+V G L ++
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYE 345
+P G A K + + + ++ R AR L HPN+V + + G Y+V++
Sbjct: 26 IPTGQEYAAKIINTKKLSARD--HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 346 FVVNGPL 352
V G L
Sbjct: 84 LVTGGEL 90
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G A+K +K+S R +EI ++ H N+V ++ Y+V + V G L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 353 -DRWL 356
DR L
Sbjct: 94 FDRIL 98
>pdb|1IXX|A Chain A, Crystal Structure Of Coagulation Factors Ix/x-binding
Protein (ix/x- Bp) From Venom Of Habu Snake With A
Heterodimer Of C-type Lectin Domains
pdb|1IXX|C Chain C, Crystal Structure Of Coagulation Factors Ix/x-binding
Protein (ix/x- Bp) From Venom Of Habu Snake With A
Heterodimer Of C-type Lectin Domains
pdb|1IXX|E Chain E, Crystal Structure Of Coagulation Factors Ix/x-binding
Protein (ix/x- Bp) From Venom Of Habu Snake With A
Heterodimer Of C-type Lectin Domains
Length = 129
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 24/131 (18%)
Query: 66 CFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNVNG----CWVGGRS 119
C+ +++W+++E C E G HL ++ S E +L +N+ W+G R
Sbjct: 13 CYKAFEKYKTWEDAERVCTEQAKGAHLVSIESSGEADFVAQLVTQNMKRLDFYIWIGLRV 72
Query: 120 INTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS--RSLVT 177
+ +WSD S S + A C + + R V
Sbjct: 73 QGKVKQCNSEWSDGSS----------------VSYENWIEAESKTCLGLEKETDFRKWVN 116
Query: 178 ERCNTSHPFIC 188
C +PF+C
Sbjct: 117 IYCGQQNPFVC 127
>pdb|2C6U|A Chain A, Crystal Structure Of Human Clec-2 (Clec1b)
Length = 122
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
+PC +W + C+G+ + +W+ES+ YC ++ A L + + + + +
Sbjct: 1 SPCDTNWRYYGDS--CYGFFRHNLTWEESKQYCTDMN---ATLLKIDNRNIVEYIKARTH 55
Query: 111 NGCWVG-GRSINTTVGLSWKWSD 132
WVG R + V WKW D
Sbjct: 56 LIRWVGLSRQKSNEV---WKWED 75
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L
Sbjct: 39 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L
Sbjct: 39 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G+ A K + K+ EI + L HP LV + D + ++YEF+ G L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRF 319
R T + + R LG K G Y + A+K L +S +++ + EI
Sbjct: 10 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
+ L HPN++ + +D Y++ EF G L + L
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 107
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L
Sbjct: 38 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRF 319
R T + + R LG K G Y + A+K L +S +++ + EI
Sbjct: 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
+ L HPN++ + +D Y++ EF G L + L
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 106
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 150 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 205
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
H N+V + + ++V EF+ G L + H
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 241
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ + G +D Y++ E+ G + R L +
Sbjct: 71 LRLYGYFHDSTRVYLILEYAPLGTVYRELQKL 102
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 268 KNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLH 323
++F G R LG K G Y + A+K L ++ ++ + + E+ + L
Sbjct: 12 EDFDIG-RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPR 361
HPN++ + G +D Y++ E+ G + R L + R
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 268 KNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLH 323
++F G R LG K G Y + A+K L ++ ++ + + E+ + L
Sbjct: 12 EDFDIG-RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPR 361
HPN++ + G +D Y++ E+ G + R L + R
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWL 356
+L
Sbjct: 138 LNFL 141
>pdb|3VPP|A Chain A, Crystal Structure Of The Human Clec9a C-Type Lectin-Like
Domain
pdb|3VPP|B Chain B, Crystal Structure Of The Human Clec9a C-Type Lectin-Like
Domain
Length = 132
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 59/151 (39%), Gaps = 42/151 (27%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRS-WDESETYCKEIGGHLAALTSYEEEH----SAQKL 105
+PCP +WI N E C+ Y+ S W S+ C + G L + S EE S +K+
Sbjct: 2 SPCPNNWIQNRE--SCY-YVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKI 58
Query: 106 CGKNVNGCWVGGRSINTTVGLS-------WKWSDNMSKWNESIHAVGSFNSSCTSLPCHV 158
G S + VGLS W W D S S LP
Sbjct: 59 KG-----------SYDYWVGLSQDGHSGRWLWQDGSSP-------------SPGLLPAER 94
Query: 159 HATVD-LCTLVSNGSRSLVTERCNTSHPFIC 188
+ + +C V S SL++ C+T FIC
Sbjct: 95 SQSANQVCGYVK--SNSLLSSNCDTWKYFIC 123
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|3FF9|A Chain A, Structure Of Nk Cell Receptor Klrg1
pdb|3FF9|B Chain B, Structure Of Nk Cell Receptor Klrg1
Length = 115
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W N S C+ + + W+ S +C + G HL + + G++
Sbjct: 2 CPILWTRN--GSHCYYFSMEKKDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLGQDFY- 58
Query: 113 CWVGGRSINTTVGLSWKW 130
W+G R+I+ W+W
Sbjct: 59 -WIGLRNID-----GWRW 70
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRF 319
R T + + R LG K G Y + A+K L +S +++ + EI
Sbjct: 9 RKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
+ L HPN++ + +D Y++ EF G L + L
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ 106
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 269 NFSEGNRL--LGDSKTGGTYSGILPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHH 324
+F + N L L ++ +G + G G+ + VK LK S ++ ++F E R H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 325 PNLVAVKGCC 334
PN++ V G C
Sbjct: 67 PNVLPVLGAC 76
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 275 RLLGDSKTGGTY-SGILPDGSRVAVKRLK---RSSFQRKKEFYSEIGRFARLHHPNLVAV 330
R +G G Y + + + VA+K++ + S ++ ++ E+ +L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 331 KGCCYDHGDRYIVYEF 346
+GC ++V E+
Sbjct: 81 RGCYLREHTAWLVMEY 96
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 354 RWLH 357
+L
Sbjct: 130 EYLR 133
>pdb|1SB2|A Chain A, High Resolution Structure Determination Of Rhodocetin
pdb|3GPR|A Chain A, Crystal Structure Of Rhodocetin
Length = 133
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC--KEIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W + KS C+ ++W+E+E +C +E HL ++ + E + N
Sbjct: 2 CPDGW--SSTKSYCYRPFKEKKTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNF 59
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMS 135
W+G + N + +WSD S
Sbjct: 60 ENKIYRSWIGLKIENKGQRSNLEWSDGSS 88
>pdb|3FF8|C Chain C, Structure Of Nk Cell Receptor Klrg1 Bound To E-Cadherin
pdb|3FF8|D Chain D, Structure Of Nk Cell Receptor Klrg1 Bound To E-Cadherin
Length = 114
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W N S C+ + + W+ S +C + G HL + + G++
Sbjct: 1 CPILWTRN--GSHCYYFSMEKKDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLGQDFY- 57
Query: 113 CWVGGRSINTTVGLSWKW 130
W+G R+I+ W+W
Sbjct: 58 -WIGLRNID-----GWRW 69
>pdb|3RS1|A Chain A, Mouse C-Type Lectin-Related Protein Clrg
pdb|3RS1|B Chain B, Mouse C-Type Lectin-Related Protein Clrg
Length = 122
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 45 MNKDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQK 104
MNK + A C +W +KCF + G R+W ++ +C LA + EE ++
Sbjct: 1 MNKTY-AACSKNWT--GVGNKCFYFSGYPRNWTFAQAFCMAQEAQLARFDNEEELIFLKR 57
Query: 105 LCGKNVNGCWVGGRSINTTVGLSWKWSDN 133
G W+G ++ WKW++N
Sbjct: 58 FKGD--FDSWIGLHRESSE--HPWKWTNN 82
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 275 RLLGDSKTGGTY-SGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV 330
R +G G Y + + + VA+K++ S Q ++ E+ +L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 331 KGCCYDHGDRYIVYEF 346
+GC ++V E+
Sbjct: 120 RGCYLREHTAWLVMEY 135
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 313 YSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+ ++ R AR L HPN+V + + G Y++++ V G L
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
>pdb|1G1T|A Chain A, Crystal Structure Of E-Selectin LectinEGF DOMAINS
Complexed With Slex
Length = 157
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 75 SWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKW 130
++DE+ YC++ HL A+ + EE + + + W+G R +N W W
Sbjct: 11 TYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNV----WVW 62
>pdb|1ESL|A Chain A, Insight Into E-Selectin(Slash)ligand Interaction From The
Crystal Structure And Mutagenesis Of The Lec(Slash)egf
Domains
Length = 162
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 75 SWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKW 130
++DE+ YC++ HL A+ + EE + + + W+G R +N W W
Sbjct: 11 TYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNV----WVW 62
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,712,745
Number of Sequences: 62578
Number of extensions: 477386
Number of successful extensions: 1507
Number of sequences better than 100.0: 326
Number of HSP's better than 100.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 332
length of query: 383
length of database: 14,973,337
effective HSP length: 101
effective length of query: 282
effective length of database: 8,652,959
effective search space: 2440134438
effective search space used: 2440134438
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)